HHSEARCH alignment of GI: 255764464 and SCOP domain: d1alna1

Alignment
>d1alna1 c.97.1.1 (A:1-150) Two-domain cytidine deaminase {Escherichia coli [TaxId: 562]}
Probab=97.23  E-value=0.00079  Score=41.14  Aligned_cols=67  Identities=24%  Similarity=0.297  Sum_probs=47.8

Q ss_pred             CCCEEEEEE-ECCEEEEEEECCC--CCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHC
Q ss_conf             980899998-3890999873473--5448864251134456666414885454116886167768898999860
Q gi|255764464|r   23 EIPVGAVAV-LNNKIISRAGNRN--RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA   93 (149)
Q Consensus        23 ~~PvGaviv-~~g~ii~~g~N~~--~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTlEPC~MC~~Ai~~a   93 (149)
                      +.+|||++. .+|+| -.|.|..  +.....+-|||..||-.+... +...+  -+++++.-||-+|-..|...
T Consensus        70 ~F~VGAa~~~~~G~i-y~G~NvE~~nas~~~sicAEr~Ai~~a~~~-G~~~i--~~i~v~~sPCG~CRQ~m~E~  139 (150)
T d1alna1          70 NFNVGAIARGVSGTW-YFGANMEFIGATMQQTVHAEQSAISHAWLS-GEKAL--AAITVNYTPCGHCRQFMNEL  139 (150)
T ss_dssp             CCCCEEEEEETTSCE-EEEECBCCTTSCGGGCBCHHHHHHHHHHHT-TCCCE--EEEEESSCCCHHHHHHHTTB
T ss_pred             CCCEEEEEEECCCCE-EEEEEECCCCCCCCCCCCHHHHHHHHHHHC-CCCCE--EEEEEECCCCHHHHHHHHHH
T ss_conf             985689999289999-998851146775677778999999999864-89834--69999758976688999996


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Cytidine deaminase-like
superfamily: Cytidine deaminase-like
family: Cytidine deaminase
domain: Two-domain cytidine deaminase
species: Escherichia coli [TaxId: 562]