HHSEARCH alignment of GI: 255764464 and SCOP domain: d1alna2

Alignment
>d1alna2 c.97.1.1 (A:151-294) Two-domain cytidine deaminase {Escherichia coli [TaxId: 562]}
Probab=97.86  E-value=1.7e-05  Score=51.13  Aligned_cols=87  Identities=15%  Similarity=0.153  Sum_probs=59.5

Q ss_pred             CHHHHHHHHHHHHHHHHHCC-CCCEEEEEE-ECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf             56999999999999887579-980899998-3890999873473544886425113445666641488545411688616
Q gi|255764464|r    3 KGNVFMSCALEEAQNAALRN-EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL   80 (149)
Q Consensus         3 ~d~~~M~~A~~~A~~a~~~g-~~PvGaviv-~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTl   80 (149)
                      +|+..++.|++.+++|+..- +.||||++. ++|+|. .|.|..+...+++.|||..||.++-.. + .++.+....+..
T Consensus        37 ~~d~L~~~A~~aa~~ayaPYS~~~vGaal~~~~G~i~-~G~nvEnaa~~~slcAE~~Ai~~av~~-G-~~~~~I~~~v~v  113 (144)
T d1alna2          37 TGDALSQAAIAAANRSHMPYSKSPSGVALECKDGRIF-SGSYAENAAFNPTLPPLQGALILLNLK-G-YDYPDIQRAVLA  113 (144)
T ss_dssp             CSSHHHHHHHHHHHTCBCTTTCCCEEEEEEETTSCEE-EEECBCCTTSTTCBCHHHHHHHHHHHT-T-CCGGGEEEEEEE
T ss_pred             CHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEE-EEEEEECCCCCCCCCHHHHHHHHHHHC-C-CCCCCEEEEEEE
T ss_conf             8799999999999846298789851589996799999-976311355678855899999999984-9-995687999998


Q ss_pred             C----C---CHHHHHHHHH
Q ss_conf             7----7---6889899986
Q gi|255764464|r   81 E----P---CTMCAAAISL   92 (149)
Q Consensus        81 E----P---C~MC~~Ai~~   92 (149)
                      |    |   |.+|-..+..
T Consensus       114 e~~~~~is~~~~~r~~l~~  132 (144)
T d1alna2         114 EKADAPLIQWDATSATLKA  132 (144)
T ss_dssp             ECTTCSSCCHHHHHHHHHH
T ss_pred             ECCCCCCCCHHHHHHHHHH
T ss_conf             2799987838999999998


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Cytidine deaminase-like
superfamily: Cytidine deaminase-like
family: Cytidine deaminase
domain: Two-domain cytidine deaminase
species: Escherichia coli [TaxId: 562]