HHSEARCH alignment of GI: 255764464 and SCOP domain: d1vq2a_

Alignment
>d1vq2a_ c.97.1.2 (A:) Deoxycytidylate deaminase {Bacteriophage T4 [TaxId: 10665]}
Probab=99.96  E-value=3.7e-30  Score=199.34  Aligned_cols=137  Identities=25%  Similarity=0.302  Sum_probs=110.7

Q ss_pred             CHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCC----------------------------------
Q ss_conf             5699999999999988757998089999838909998734735448----------------------------------
Q gi|255764464|r    3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----------------------------------   48 (149)
Q Consensus         3 ~d~~~M~~A~~~A~~a~~~g~~PvGaviv~~g~ii~~g~N~~~~~~----------------------------------   48 (149)
                      +++.||++|+.+|+++.. ...|||||||++|+||+.|||..-...                                  
T Consensus         2 ~~~~~M~~A~~~A~rS~c-~~~~VGAVIV~~~~IIs~G~Ng~p~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (193)
T d1vq2a_           2 KASTVLQIAYLVSQESKC-CSWKVGAVIEKNGRIISTGYNGSPAGGVNCCDYAAEQGWLLNKPKHAIIQGHKPECVSFGS   80 (193)
T ss_dssp             CHHHHHHHHHHHHTTCCC-SSBCCEEEEEETTEEEEEEECBCCTTSCCHHHHHHHHTCEEEC------------------
T ss_pred             CHHHHHHHHHHHHHHCCC-CCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCC
T ss_conf             889999999999976899-8998689999899899986068867887654202443211033100111012221122322


Q ss_pred             -------------------CCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCE
Q ss_conf             -------------------8642511344566664148854541168861677688989998608885999711798850
Q gi|255764464|r   49 -------------------DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG  109 (149)
Q Consensus        49 -------------------d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTlEPC~MC~~Ai~~agI~rVvyg~~d~~~g~  109 (149)
                                         +.+.|||++||.+|.+.  ...+.++|||||+|||+||+.+|+++||++|||+..+++.. 
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~HAE~nai~~a~~~--~~~~~~~~ly~t~~PC~~Ca~~i~~~gI~~V~~~~~~~~~~-  157 (193)
T d1vq2a_          81 TDRFVLAKEHRSAHSEWSSKNEIHAELNAILFAAEN--GSSIEGATMYVTLSPCPDCAKAIAQSGIKKLVYCETYDKNK-  157 (193)
T ss_dssp             --CEEECGGGHHHHHHHHHHHCBCHHHHHHHHHHHH--TCCCTTCEEEEEECCCHHHHHHHHHHTCCEEEEEECCTTCC-
T ss_pred             CCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHC--CCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCC-
T ss_conf             110000001344321125789868999999987760--77877754772589967899999851578899972799854-


Q ss_pred             ECCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHC
Q ss_conf             1741344431689999879928218999999899988409
Q gi|255764464|r  110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR  149 (149)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~v~~gvl~ee~~~Ll~~ff~~kR  149 (149)
                       ....+++...+    ++|+ .++++|+.+|+++||.+-|
T Consensus       158 -~~~~~~l~~~g----I~v~-~i~~~~~~~l~~~~~~~~~  191 (193)
T d1vq2a_         158 -PGWDDILRNAG----IEVF-NVPKKNLNKLNWENINEFC  191 (193)
T ss_dssp             -TTTTHHHHHTT----CEEE-ECCGGGCCSSCGGGCCCBC
T ss_pred             -HHHHHHHHHCC----CEEE-ECCHHHHHHHHHHHHHHHH
T ss_conf             -78999999879----9899-5399999999899999985


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Cytidine deaminase-like
superfamily: Cytidine deaminase-like
family: Deoxycytidylate deaminase-like
domain: Deoxycytidylate deaminase
species: Bacteriophage T4 [TaxId: 10665]