HHSEARCH alignment of GI: 255764464 and SCOP domain: d2b3za2

Alignment
>d2b3za2 c.97.1.2 (A:1-145) Riboflavin biosynthesis protein RibD {Bacillus subtilis [TaxId: 1423]}
Probab=100.00  E-value=8.6e-39  Score=251.24  Aligned_cols=133  Identities=29%  Similarity=0.409  Sum_probs=120.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCCC--CEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCC
Q ss_conf             699999999999988757998--089999838909998734735448864251134456666414885454116886167
Q gi|255764464|r    4 GNVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE   81 (149)
Q Consensus         4 d~~~M~~A~~~A~~a~~~g~~--PvGaviv~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTlE   81 (149)
                      |++||++|+++|+++...+++  |||||||++|+||+.|+|+.    +++.|||..|+..|..+     +.+++||+|+|
T Consensus         2 De~fM~~Al~~A~~a~~~~~~~p~VGaViV~~g~ii~~g~n~~----~~~~hae~~a~~~a~~~-----~~~~~lyvtle   72 (145)
T d2b3za2           2 EEYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLK----YGEAHAEVHAIHMAGAH-----AEGADIYVTLE   72 (145)
T ss_dssp             HHHHHHHHHHHHGGGTTSSTTSCCCEEEEESSSSEEEEEECCS----TTSCCHHHHHHHHHGGG-----GTTCEEEESSC
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEECCCCCCC----CCCCCHHHHHHHHHHHH-----HHCCCCCCCCC
T ss_conf             4999999999998614677999988999995572101222233----57773265789998988-----63345333456


Q ss_pred             CC------HHHHHHHHHCCCCEEEEEECCCCCCEECCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHC
Q ss_conf             76------889899986088859997117988501741344431689999879928218999999899988409
Q gi|255764464|r   82 PC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR  149 (149)
Q Consensus        82 PC------~MC~~Ai~~agI~rVvyg~~d~~~g~~~~~~~~~~~~~~~~~~~v~~gvl~ee~~~Ll~~ff~~kR  149 (149)
                      ||      +||++||+|+||+|||||+.||+.|..++..+++..    +.++|++|++++||.+||++||+++|
T Consensus        73 pc~~~~~~~mC~~aIi~agI~rVvyg~~d~~~~~~g~~~~~l~~----~gieV~~gvl~~e~~~ll~~Ff~~~r  142 (145)
T d2b3za2          73 PCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVAGRGISMMKE----AGIEVREGILADQAERLNEKFLHFMR  142 (145)
T ss_dssp             CCCCCSSSCCHHHHHHHHTCCEEEESSCCSCTTTTTHHHHHHHT----TTCEEEECTTHHHHHHHTHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHC----CCCEEECCCCHHHHHHHHHHHHHHHH
T ss_conf             43456896208899998289957751334676555738899980----99989808479999999999999986


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Cytidine deaminase-like
superfamily: Cytidine deaminase-like
family: Deoxycytidylate deaminase-like
domain: Riboflavin biosynthesis protein RibD
species: Bacillus subtilis [TaxId: 1423]