HHSEARCH alignment of GI: 255764464 and SCOP domain: d2fr5a1

Alignment
>d2fr5a1 c.97.1.1 (A:11-146) mono-domain cytidine deaminase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.76  E-value=0.00013  Score=45.97  Aligned_cols=93  Identities=17%  Similarity=0.212  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHC-----CCCCEEEEEEE-CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEC--
Q ss_conf             99999999988757-----99808999983-89099987347354488642511344566664148854541168861--
Q gi|255764464|r    8 MSCALEEAQNAALR-----NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT--   79 (149)
Q Consensus         8 M~~A~~~A~~a~~~-----g~~PvGaviv~-~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtT--   79 (149)
                      ++..+++|+++.+.     -+.||||++.. +|+|. .|.|.-+.....+-|||..||-++...-. ..+......+.  
T Consensus         5 ~~~l~~~A~~a~~~AyaPYS~f~VGAa~~~~dG~i~-~G~NvEnasy~~~iCAEr~Ai~~a~~~g~-~~~~~~~~~~~~~   82 (136)
T d2fr5a1           5 VQRLLLSSREAKKSAYCPYSRFPVGAALLTGDGRIF-SGCNIENACYPLGVCAERTAIQKAISEGY-KDFRAIAISSDLQ   82 (136)
T ss_dssp             HHHHHHHHHHHHTTCBCTTTCCCEEEEEEETTSCEE-EEECBCCSSGGGCBCHHHHHHHHHHHTTC-CCEEEEEEEESCS
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEE-EEEEECCCCCCCCCCHHHEEEEEEECCCC-CCEEEEEEECCCC
T ss_conf             999999999999628488669967899995899899-98740356665663522100023101288-5179998311467


Q ss_pred             ---CCCCHHHHHHHHHCCCCEEEEEE
Q ss_conf             ---67768898999860888599971
Q gi|255764464|r   80 ---LEPCTMCAAAISLARIRRLYYGA  102 (149)
Q Consensus        80 ---lEPC~MC~~Ai~~agI~rVvyg~  102 (149)
                         +-||-+|-..|...+-...|+-.
T Consensus        83 ~~~~~PCG~CRQ~l~E~~~~~~i~~~  108 (136)
T d2fr5a1          83 EEFISPCGACRQVMREFGTDWAVYMT  108 (136)
T ss_dssp             SSCCCCCHHHHHHHHHTCSSCEEEEE
T ss_pred             CCCCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf             88878656665899860998569998


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Cytidine deaminase-like
superfamily: Cytidine deaminase-like
family: Cytidine deaminase
domain: mono-domain cytidine deaminase
species: Mouse (Mus musculus) [TaxId: 10090]