HHSEARCH alignment of GI: 255764464 and SCOP domain: d2hxva2

Alignment
>d2hxva2 c.97.1.2 (A:1-147) Riboflavin biosynthesis protein RibD {Thermotoga maritima [TaxId: 2336]}
Probab=100.00  E-value=1.1e-39  Score=256.69  Aligned_cols=133  Identities=29%  Similarity=0.397  Sum_probs=116.0

Q ss_pred             HHHHHHHHHHHHHHHHH--CCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCC
Q ss_conf             69999999999998875--7998089999838909998734735448864251134456666414885454116886167
Q gi|255764464|r    4 GNVFMSCALEEAQNAAL--RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE   81 (149)
Q Consensus         4 d~~~M~~A~~~A~~a~~--~g~~PvGaviv~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTlE   81 (149)
                      |+.||++|+++|+++..  .|++|||||||++|+||+.|+|+.    +++.|||++||.+|.+.  .+++.|+|||||+|
T Consensus         2 he~~M~~Al~~A~~~~~~~~~~~pVGaViV~~g~IIa~g~n~~----~~~~hae~~ai~~a~~~--~~~l~~~~lYvTlE   75 (147)
T d2hxva2           2 YETFMKRAIELAKKGLGRVNPNPPVGAVVVKDGRIIAEGFHPY----FGGPHAERMAIESARKK--GEDLRGATLIVTLE   75 (147)
T ss_dssp             HHHHHHHHHHHHHTTTTTSTTSCCCEEEEEETTEEEEEEECCS----TTSCCHHHHHHHHHHHT--TCCCTTCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEECEEC----CCCCHHHHHHHHHHHHH--CCCCCCCEEEECCC
T ss_conf             6999999999998605667999948999998994777611003----68834899989999981--78877988852045


Q ss_pred             CC------HHHHHHHHHCCCCEEEEEECCCCCCEECCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHH
Q ss_conf             76------8898999860888599971179885017413444316899998799282189999998999884
Q gi|255764464|r   82 PC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE  147 (149)
Q Consensus        82 PC------~MC~~Ai~~agI~rVvyg~~d~~~g~~~~~~~~~~~~~~~~~~~v~~gvl~ee~~~Ll~~ff~~  147 (149)
                      ||      +||++||+|+||+|||||+.||+.+ .++..+.+.    ++.++|++|||++||.+|++.||+.
T Consensus        76 PC~~~~~~p~C~~ai~~agi~rVv~g~~dp~~~-~~~~~~~l~----~~~i~V~~gvl~~e~~~l~~~F~~~  142 (147)
T d2hxva2          76 PCDHHGKTPPCTDLIIESGIKTVVIGTRDPNPV-SGNGVEKFR----NHGIEVIEGVLEEEVKKLCEFFITY  142 (147)
T ss_dssp             CCCSCSSSCCHHHHHHHHTCCEEEEEECCCCGG-GCCHHHHHH----TTTCEEEECTTHHHHHHHTHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCC-CCHHHHHHH----CCCCEEEECCCHHHHHHHHHHHHHH
T ss_conf             555569972355777753865245642446541-002335655----5997899385799999999999999


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Cytidine deaminase-like
superfamily: Cytidine deaminase-like
family: Deoxycytidylate deaminase-like
domain: Riboflavin biosynthesis protein RibD
species: Thermotoga maritima [TaxId: 2336]