BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|255764464|ref|YP_003064771.2| Cytidine/deoxycytidylate deaminase, zinc-binding region [Candidatus Liberibacter asiaticus str. psy62] (149 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|255764464|ref|YP_003064771.2| Cytidine/deoxycytidylate deaminase, zinc-binding region [Candidatus Liberibacter asiaticus str. psy62] gi|254547815|gb|ACT56831.2| Cytidine/deoxycytidylate deaminase, zinc-binding region [Candidatus Liberibacter asiaticus str. psy62] Length = 149 Score = 308 bits (789), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 149/149 (100%), Positives = 149/149 (100%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR Sbjct: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA Sbjct: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCHHSPEIYPGISEQRSRQIIQDFFKERR Sbjct: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 >gi|315122181|ref|YP_004062670.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495583|gb|ADR52182.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 150 Score = 259 bits (662), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 124/145 (85%), Positives = 131/145 (90%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FMS ALEEA NA+LRNEIPVGAVAVLNNKII RAGNRNRELKDVTAHAEILAIRM C+ Sbjct: 5 NNFMSLALEEALNASLRNEIPVGAVAVLNNKIIGRAGNRNRELKDVTAHAEILAIRMSCQ 64 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 LSQE LP VDLYVTLEPCTMCAAAIS ARIRRLYYGASNPKGG IENG +FYTLATCHH Sbjct: 65 TLSQETLPGVDLYVTLEPCTMCAAAISFARIRRLYYGASNPKGGAIENGIEFYTLATCHH 124 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 PEIY GI+E+RS+QI+Q FFKERR Sbjct: 125 KPEIYSGIAEKRSKQIMQKFFKERR 149 >gi|306840968|ref|ZP_07473709.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp. BO2] gi|306289025|gb|EFM60290.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp. BO2] Length = 157 Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 95/142 (66%), Positives = 111/142 (78%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A R E+P+GAV V N +II+RAGNR RE DVTAHAEILAIR +L Sbjct: 16 MDIALEEAHAAGERGEVPIGAVIVRNGEIIARAGNRTREFNDVTAHAEILAIRQAGEVLG 75 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT TCHH+PE Sbjct: 76 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 135 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IYPG E +R+I++DFF+E+R Sbjct: 136 IYPGFCEADARKILKDFFREKR 157 >gi|222085014|ref|YP_002543543.1| cytosine deaminase protein [Agrobacterium radiobacter K84] gi|221722462|gb|ACM25618.1| cytosine deaminase protein [Agrobacterium radiobacter K84] Length = 152 Score = 201 bits (510), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 92/149 (61%), Positives = 115/149 (77%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M N FM AL EA++A R E+P+GAV VL+N +I++AGNR REL DVTAHAEI AIR Sbjct: 1 MANTNHFMKLALAEARSAGARGEVPIGAVLVLDNAVIAKAGNRTRELNDVTAHAEIAAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + C L QE L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGGG++NG +FY Sbjct: 61 IACEALGQERLTGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGGVDNGVRFYRQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCHH+PE+Y GI+E+ + I+++FF+ +R Sbjct: 121 TCHHAPEVYSGIAERDAADILREFFQLKR 149 >gi|15888031|ref|NP_353712.1| cytidine and deoxycytidylate deaminase [Agrobacterium tumefaciens str. C58] gi|15155649|gb|AAK86497.1| cytidine and deoxycytidylate deaminase [Agrobacterium tumefaciens str. C58] Length = 152 Score = 200 bits (508), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 89/149 (59%), Positives = 116/149 (77%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM AL EA++A R+E+P+GAV VL+ ++I+R+GNR REL DVTAHAEI IR Sbjct: 1 MAERTHFMELALVEARSAGERDEVPIGAVLVLDGRVIARSGNRTRELNDVTAHAEIAVIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M C L QE LP DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG +E+G +F++ Sbjct: 61 MACEALGQERLPGADLYVTLEPCTMCAAAISFARIRRLYYGAQDPKGGAVESGVRFFSQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCHH+P++Y G++E S +I++ FF+E+R Sbjct: 121 TCHHAPDVYSGLAESESAEILRQFFREKR 149 >gi|254719939|ref|ZP_05181750.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp. 83/13] gi|265984947|ref|ZP_06097682.1| CMP/dCMP deaminase zinc-binding protein [Brucella sp. 83/13] gi|306838528|ref|ZP_07471366.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp. NF 2653] gi|264663539|gb|EEZ33800.1| CMP/dCMP deaminase zinc-binding protein [Brucella sp. 83/13] gi|306406395|gb|EFM62636.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp. NF 2653] Length = 157 Score = 199 bits (507), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 93/142 (65%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A R E+P+GAV V + +II+RAGNR RE DVTAHAEIL IR +L Sbjct: 16 MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEVLG 75 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT TCHH+PE Sbjct: 76 SERLVDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 135 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IYPG E +R+I++DFF+E+R Sbjct: 136 IYPGFCEADARKILKDFFREKR 157 >gi|306845521|ref|ZP_07478090.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp. BO1] gi|306273842|gb|EFM55669.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp. BO1] Length = 157 Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 93/142 (65%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A R E+P+GAV V + +II+RAGNR RE DVTAHAEIL IR +L Sbjct: 16 MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEVLG 75 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT TCHH+PE Sbjct: 76 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 135 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IYPG E +R+I++DFF+E+R Sbjct: 136 IYPGFCEADARKILRDFFREKR 157 >gi|225628666|ref|ZP_03786700.1| cytidine and deoxycytidylate deaminase family protein [Brucella ceti str. Cudo] gi|237816711|ref|ZP_04595703.1| cytidine and deoxycytidylate deaminase family protein [Brucella abortus str. 2308 A] gi|225616512|gb|EEH13560.1| cytidine and deoxycytidylate deaminase family protein [Brucella ceti str. Cudo] gi|237787524|gb|EEP61740.1| cytidine and deoxycytidylate deaminase family protein [Brucella abortus str. 2308 A] Length = 171 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 93/142 (65%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A R E+P+GAV V + +II+RAGNR RE DVTAHAEIL IR +L Sbjct: 30 MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 89 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT TCHH+PE Sbjct: 90 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 149 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IYPG E +R+I++DFF+E+R Sbjct: 150 IYPGFCEADARKILKDFFREKR 171 >gi|62317152|ref|YP_223005.1| cytidine and deoxycytidylate deaminase family protein [Brucella abortus bv. 1 str. 9-941] gi|83269135|ref|YP_418426.1| cytidine/deoxycytidylate deaminase [Brucella melitensis biovar Abortus 2308] gi|161620282|ref|YP_001594168.1| CMP/dCMP deaminase zinc-binding [Brucella canis ATCC 23365] gi|189022411|ref|YP_001932152.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Brucella abortus S19] gi|254691365|ref|ZP_05154619.1| cytidine and deoxycytidylate deaminase family protein [Brucella abortus bv. 6 str. 870] gi|254695335|ref|ZP_05157163.1| cytidine and deoxycytidylate deaminase family protein [Brucella abortus bv. 3 str. Tulya] gi|254698431|ref|ZP_05160259.1| cytidine and deoxycytidylate deaminase family protein [Brucella abortus bv. 2 str. 86/8/59] gi|254699495|ref|ZP_05161323.1| cytidine and deoxycytidylate deaminase family protein [Brucella suis bv. 5 str. 513] gi|254702619|ref|ZP_05164447.1| cytidine and deoxycytidylate deaminase family protein [Brucella suis bv. 3 str. 686] gi|254706250|ref|ZP_05168078.1| cytidine and deoxycytidylate deaminase family protein [Brucella pinnipedialis M163/99/10] gi|254711456|ref|ZP_05173267.1| cytidine and deoxycytidylate deaminase family protein [Brucella pinnipedialis B2/94] gi|254712059|ref|ZP_05173870.1| cytidine and deoxycytidylate deaminase family protein [Brucella ceti M644/93/1] gi|254715129|ref|ZP_05176940.1| cytidine and deoxycytidylate deaminase family protein [Brucella ceti M13/05/1] gi|254731878|ref|ZP_05190456.1| cytidine and deoxycytidylate deaminase family protein [Brucella abortus bv. 4 str. 292] gi|256014990|ref|YP_003104999.1| cytidine and deoxycytidylate deaminase family protein [Brucella microti CCM 4915] gi|256029913|ref|ZP_05443527.1| cytidine and deoxycytidylate deaminase family protein [Brucella pinnipedialis M292/94/1] gi|256043124|ref|ZP_05446066.1| cytidine and deoxycytidylate deaminase family protein [Brucella melitensis bv. 1 str. Rev.1] gi|256059562|ref|ZP_05449761.1| cytidine and deoxycytidylate deaminase family protein [Brucella neotomae 5K33] gi|256111894|ref|ZP_05452850.1| cytidine and deoxycytidylate deaminase family protein [Brucella melitensis bv. 3 str. Ether] gi|256158082|ref|ZP_05456000.1| cytidine and deoxycytidylate deaminase family protein [Brucella ceti M490/95/1] gi|256252963|ref|ZP_05458499.1| cytidine and deoxycytidylate deaminase family protein [Brucella ceti B1/94] gi|256256550|ref|ZP_05462086.1| cytidine and deoxycytidylate deaminase family protein [Brucella abortus bv. 9 str. C68] gi|260166985|ref|ZP_05753796.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp. F5/99] gi|260544385|ref|ZP_05820206.1| cytidine/deoxycytidylate deaminase [Brucella abortus NCTC 8038] gi|260564346|ref|ZP_05834831.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 1 str. 16M] gi|260568473|ref|ZP_05838942.1| cytidine/deoxycytidylate deaminase [Brucella suis bv. 4 str. 40] gi|260756977|ref|ZP_05869325.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 6 str. 870] gi|260759649|ref|ZP_05871997.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 4 str. 292] gi|260762892|ref|ZP_05875224.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 2 str. 86/8/59] gi|260882788|ref|ZP_05894402.1| cytidine/deoxycytidylate deaminase [Brucella abortus bv. 9 str. C68] gi|261215706|ref|ZP_05929987.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 3 str. Tulya] gi|261216837|ref|ZP_05931118.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M13/05/1] gi|261220056|ref|ZP_05934337.1| cytidine/deoxycytidylate deaminase [Brucella ceti B1/94] gi|261313693|ref|ZP_05952890.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis M163/99/10] gi|261319065|ref|ZP_05958262.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis B2/94] gi|261319704|ref|ZP_05958901.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M644/93/1] gi|261323530|ref|ZP_05962727.1| cytidine/deoxycytidylate deaminase [Brucella neotomae 5K33] gi|261749950|ref|ZP_05993659.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 5 str. 513] gi|261753203|ref|ZP_05996912.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 3 str. 686] gi|261756372|ref|ZP_06000081.1| cytidine/deoxycytidylate deaminase [Brucella sp. F5/99] gi|265986931|ref|ZP_06099488.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis M292/94/1] gi|265989556|ref|ZP_06102113.1| CMP/dCMP deaminase zinc-binding protein [Brucella melitensis bv. 1 str. Rev.1] gi|265993342|ref|ZP_06105899.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 3 str. Ether] gi|265996597|ref|ZP_06109154.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M490/95/1] gi|294853219|ref|ZP_06793891.1| cytosine deaminase [Brucella sp. NVSL 07-0026] gi|62197345|gb|AAX75644.1| cytidine and deoxycytidylate deaminase family protein [Brucella abortus bv. 1 str. 9-941] gi|82939409|emb|CAJ12363.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Brucella melitensis biovar Abortus 2308] gi|161337093|gb|ABX63397.1| CMP/dCMP deaminase zinc-binding [Brucella canis ATCC 23365] gi|189020985|gb|ACD73706.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Brucella abortus S19] gi|255997650|gb|ACU49337.1| cytidine and deoxycytidylate deaminase family protein [Brucella microti CCM 4915] gi|260097656|gb|EEW81530.1| cytidine/deoxycytidylate deaminase [Brucella abortus NCTC 8038] gi|260151989|gb|EEW87082.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 1 str. 16M] gi|260155138|gb|EEW90219.1| cytidine/deoxycytidylate deaminase [Brucella suis bv. 4 str. 40] gi|260669967|gb|EEX56907.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 4 str. 292] gi|260673313|gb|EEX60134.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 2 str. 86/8/59] gi|260677085|gb|EEX63906.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 6 str. 870] gi|260872316|gb|EEX79385.1| cytidine/deoxycytidylate deaminase [Brucella abortus bv. 9 str. C68] gi|260917313|gb|EEX84174.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 3 str. Tulya] gi|260918640|gb|EEX85293.1| cytidine/deoxycytidylate deaminase [Brucella ceti B1/94] gi|260921926|gb|EEX88494.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M13/05/1] gi|261292394|gb|EEX95890.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M644/93/1] gi|261298288|gb|EEY01785.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis B2/94] gi|261299510|gb|EEY03007.1| cytidine/deoxycytidylate deaminase [Brucella neotomae 5K33] gi|261302719|gb|EEY06216.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis M163/99/10] gi|261736356|gb|EEY24352.1| cytidine/deoxycytidylate deaminase [Brucella sp. F5/99] gi|261739703|gb|EEY27629.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 5 str. 513] gi|261742956|gb|EEY30882.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 3 str. 686] gi|262550894|gb|EEZ07055.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M490/95/1] gi|262764212|gb|EEZ10244.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 3 str. Ether] gi|263000225|gb|EEZ12915.1| CMP/dCMP deaminase zinc-binding protein [Brucella melitensis bv. 1 str. Rev.1] gi|264659128|gb|EEZ29389.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis M292/94/1] gi|294818874|gb|EFG35874.1| cytosine deaminase [Brucella sp. NVSL 07-0026] Length = 157 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 93/142 (65%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A R E+P+GAV V + +II+RAGNR RE DVTAHAEIL IR +L Sbjct: 16 MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 75 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT TCHH+PE Sbjct: 76 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 135 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IYPG E +R+I++DFF+E+R Sbjct: 136 IYPGFCEADARKILKDFFREKR 157 >gi|225686059|ref|YP_002734031.1| cytidine and deoxycytidylate deaminase family protein [Brucella melitensis ATCC 23457] gi|256262820|ref|ZP_05465352.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 2 str. 63/9] gi|225642164|gb|ACO02077.1| cytidine and deoxycytidylate deaminase family protein [Brucella melitensis ATCC 23457] gi|263092641|gb|EEZ16862.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 2 str. 63/9] gi|326410383|gb|ADZ67447.1| cytidine and deoxycytidylate deaminase family protein [Brucella melitensis M28] Length = 157 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 93/142 (65%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A R E+P+GAV V + +II+RAGNR RE DVTAHAEIL IR +L Sbjct: 16 MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 75 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT TCHH+PE Sbjct: 76 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQLTCHHAPE 135 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IYPG E +R+I++DFF+E+R Sbjct: 136 IYPGFCEADARKILKDFFREKR 157 >gi|17989385|ref|NP_542018.1| cytosine deaminase [Brucella melitensis bv. 1 str. 16M] gi|148558663|ref|YP_001257252.1| cytidine and deoxycytidylate deaminase family protein [Brucella ovis ATCC 25840] gi|297249905|ref|ZP_06933606.1| cytosine deaminase [Brucella abortus bv. 5 str. B3196] gi|17985258|gb|AAL54282.1| cytosine deaminase [Brucella melitensis bv. 1 str. 16M] gi|148369948|gb|ABQ62820.1| cytidine and deoxycytidylate deaminase family protein [Brucella ovis ATCC 25840] gi|297173774|gb|EFH33138.1| cytosine deaminase [Brucella abortus bv. 5 str. B3196] Length = 204 Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 93/142 (65%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A R E+P+GAV V + +II+RAGNR RE DVTAHAEIL IR +L Sbjct: 63 MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 122 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT TCHH+PE Sbjct: 123 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 182 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IYPG E +R+I++DFF+E+R Sbjct: 183 IYPGFCEADARKILKDFFREKR 204 >gi|163844392|ref|YP_001622047.1| hypothetical protein BSUIS_B0208 [Brucella suis ATCC 23445] gi|163675115|gb|ABY39225.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 157 Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 92/142 (64%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A R E+P+GA+ V + +II+RAGNR RE DVTAHAEIL IR +L Sbjct: 16 MDIALEEAHAAGERGEVPIGAIIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 75 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT TCHH+PE Sbjct: 76 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHTPE 135 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IYPG E +R+I++DFF+E+R Sbjct: 136 IYPGFCEADARKILKDFFREKR 157 >gi|326553676|gb|ADZ88315.1| cytidine and deoxycytidylate deaminase family protein [Brucella melitensis M5-90] Length = 142 Score = 197 bits (502), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 93/142 (65%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A R E+P+GAV V + +II+RAGNR RE DVTAHAEIL IR +L Sbjct: 1 MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT TCHH+PE Sbjct: 61 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQLTCHHAPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IYPG E +R+I++DFF+E+R Sbjct: 121 IYPGFCEADARKILKDFFREKR 142 >gi|23499966|ref|NP_699406.1| cytidine and deoxycytidylate deaminase family protein [Brucella suis 1330] gi|23463547|gb|AAN33411.1| cytidine and deoxycytidylate deaminase family protein [Brucella suis 1330] Length = 157 Score = 197 bits (502), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 93/142 (65%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A R E+P+GAV V + +II+RAGNR RE DVTAHAEIL IR +L Sbjct: 16 MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILIIRQAGEMLG 75 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT TCHH+PE Sbjct: 76 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 135 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IYPG E +R+I++DFF+E+R Sbjct: 136 IYPGFCEADARKILKDFFREKR 157 >gi|218461412|ref|ZP_03501503.1| putative nitrogen fixation symbiosis related protein [Rhizobium etli Kim 5] Length = 157 Score = 197 bits (501), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 89/147 (60%), Positives = 113/147 (76%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K N FM ALEEA+ A R E+P+GAV V+++ +SR+GNR REL DVTAHAEI AIR+ Sbjct: 8 KTNRFMEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRELNDVTAHAEIAAIRLA 67 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C L QE L DLYVTLEPCTMCAAAIS AR+RRLYYGA +PKGG ++NG +FY TC Sbjct: 68 CEALGQERLAGADLYVTLEPCTMCAAAISFARVRRLYYGAEDPKGGAVDNGVRFYAQPTC 127 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 HH+PE+Y G++E +S +I++ FF ++R Sbjct: 128 HHAPEVYSGLNEVQSAEILRKFFSQKR 154 >gi|218674406|ref|ZP_03524075.1| CMP/dCMP deaminase zinc-binding protein [Rhizobium etli GR56] Length = 157 Score = 197 bits (500), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 90/147 (61%), Positives = 112/147 (76%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K N FM ALEEA+ A R E+P+GAV V+++ +SR+GNR REL DVTAHAEI AIR+ Sbjct: 8 KTNRFMEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRELNDVTAHAEIAAIRLA 67 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C L QE L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FY TC Sbjct: 68 CEALGQERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYAQPTC 127 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 HH+PE+Y G +E +S +I++ FF ++R Sbjct: 128 HHAPEVYSGFNEVQSAEILRTFFSQKR 154 >gi|241203269|ref|YP_002974365.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857159|gb|ACS54826.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 145 Score = 194 bits (492), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 89/142 (62%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA+ A R E+P+GAV V+++ +SR+GNR RELKDVTAHAEI AIR+ C L Sbjct: 1 MEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRELKDVTAHAEIAAIRLACEALG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 QE L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGGG++NG +FY TCHH+PE Sbjct: 61 QERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGGVDNGVRFYGQPTCHHAPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G +E +S +++ FF +RR Sbjct: 121 VYSGFNEVQSANLLRRFFSQRR 142 >gi|218682181|ref|ZP_03529782.1| CMP/dCMP deaminase zinc-binding protein [Rhizobium etli CIAT 894] Length = 145 Score = 193 bits (490), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 88/142 (61%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA+ A R E+P+GAV V+++ +SR+GNR REL DVTAHAEI AIR+ C L Sbjct: 1 MEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRELNDVTAHAEIAAIRLACEALG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 QE L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGGG++NG +FY TCHH+PE Sbjct: 61 QERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGGVDNGVRFYAQPTCHHAPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G +E +S +I++ FF ++R Sbjct: 121 VYSGFNEVQSAEILRRFFSQKR 142 >gi|209548083|ref|YP_002280000.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533839|gb|ACI53774.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 145 Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 88/142 (61%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA+ A R E+P+GAV V+++ +SR+GNR REL DVTAHAEI AIR+ C L Sbjct: 1 MEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRELNDVTAHAEIAAIRLACEGLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 QE L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGGG++NG +FY TCHH+PE Sbjct: 61 QERLVGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGGVDNGVRFYAQPTCHHAPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G +E +S +I++ FF ++R Sbjct: 121 VYSGFNEVQSAEILRTFFSQKR 142 >gi|78101280|pdb|2A8N|A Chain A, Biochemical And Structural Studies Of A-To-I Editing By Trna:a34 Deaminases At The Wobble Position Of Transfer Rna gi|78101281|pdb|2A8N|B Chain B, Biochemical And Structural Studies Of A-To-I Editing By Trna:a34 Deaminases At The Wobble Position Of Transfer Rna Length = 144 Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 86/144 (59%), Positives = 111/144 (77%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM AL EA++A R+E+P+GAV VL+ ++I+R+GNR REL DVTAHAEI IR Sbjct: 1 MAERTHFMELALVEARSAGERDEVPIGAVLVLDGRVIARSGNRTRELNDVTAHAEIAVIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M C L QE LP DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG +E+G +F++ Sbjct: 61 MACEALGQERLPGADLYVTLEPCTMCAAAISFARIRRLYYGAQDPKGGAVESGVRFFSQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144 TCHH+P++Y G++E S +I++ F Sbjct: 121 TCHHAPDVYSGLAESESAEILRQF 144 >gi|222147690|ref|YP_002548647.1| cytidine and deoxycytidylate deaminase [Agrobacterium vitis S4] gi|221734678|gb|ACM35641.1| cytidine and deoxycytidylate deaminase [Agrobacterium vitis S4] Length = 149 Score = 191 bits (484), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 88/143 (61%), Positives = 107/143 (74%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEAQ A R E+P+GAV V N I++RAGN R L+DVTAHAEILAIR C IL Sbjct: 7 FMDVALEEAQLAGARGEVPIGAVLVKNGVILARAGNETRALQDVTAHAEILAIRRACAIL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPCTMCAAAIS ARIRRLYYGA + KGGG+++G +FY+ TCHH+P Sbjct: 67 EDERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAPDEKGGGVDHGARFYSQPTCHHAP 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++Y GI E + +++DFF +R Sbjct: 127 DVYAGIGETEAAALLKDFFTAKR 149 >gi|239833547|ref|ZP_04681875.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum intermedium LMG 3301] gi|239821610|gb|EEQ93179.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum intermedium LMG 3301] Length = 173 Score = 189 bits (481), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 91/142 (64%), Positives = 108/142 (76%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA+ A R E+P+GAV V II+RAGNR REL DVTAHAE+LAIR L Sbjct: 32 MEIALEEARAAGARGEVPIGAVIVHQGTIIARAGNRTRELNDVTAHAEVLAIREAGETLQ 91 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L DLYVTLEPC MCAAAIS ARIRRLYYGA++PKGGG+E+G +FYT TCHH PE Sbjct: 92 SERLVGCDLYVTLEPCAMCAAAISFARIRRLYYGATDPKGGGVEHGPRFYTQPTCHHVPE 151 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IY G SE S++I+++FF++RR Sbjct: 152 IYAGFSEGDSQKILREFFRDRR 173 >gi|153010358|ref|YP_001371572.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum anthropi ATCC 49188] gi|151562246|gb|ABS15743.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum anthropi ATCC 49188] Length = 173 Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 89/142 (62%), Positives = 107/142 (75%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EA+ A R E+P+GAV V II+RAGNR RE DVTAHAE+LAIR + L Sbjct: 32 MEIALAEARAAGSRGEVPIGAVIVHQGTIIARAGNRTREFNDVTAHAEVLAIREAGKALQ 91 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCA AIS ARIRRLYYGAS+PKGGG+E+G +FYT TCHH PE Sbjct: 92 SERLVDCDLYVTLEPCAMCATAISFARIRRLYYGASDPKGGGVEHGPRFYTQPTCHHVPE 151 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IY G SE S++I++DFF+++R Sbjct: 152 IYAGFSEGDSQKILRDFFRDKR 173 >gi|327191131|gb|EGE58176.1| CMP/dCMP deaminase zinc-binding protein [Rhizobium etli CNPAF512] Length = 145 Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 86/142 (60%), Positives = 108/142 (76%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA+ A R E+P+GAV V+++ +SR+GNR RE DVTAHAEI AIR+ C L Sbjct: 1 MEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRERNDVTAHAEIAAIRLACEALG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 QE L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FY TCHH+PE Sbjct: 61 QERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYAQPTCHHAPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G +E +S +I++ FF ++R Sbjct: 121 VYSGFNEVQSAEILRTFFSQKR 142 >gi|163758411|ref|ZP_02165499.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Hoeflea phototrophica DFL-43] gi|162284700|gb|EDQ34983.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Hoeflea phototrophica DFL-43] Length = 148 Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 86/146 (58%), Positives = 110/146 (75%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 G +M ALEE + AA R E+PVGAV VL+ ++I+RAGNR REL DVTAHAEILAIR Sbjct: 3 GQGYMDLALEEGRQAAERGEVPVGAVIVLDGEVIARAGNRTRELNDVTAHAEILAIRQAA 62 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 LS E L DLYVTLEPCTMCAAAIS AR+RRLYY A + KGG + +G +F+ TCH Sbjct: 63 MQLSSERLIGADLYVTLEPCTMCAAAISFARLRRLYYAADDEKGGAVTSGVRFFDQPTCH 122 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H+P++YPG++ + ++++DFF+ERR Sbjct: 123 HAPDVYPGLAASDAMRLLKDFFRERR 148 >gi|114705782|ref|ZP_01438685.1| CMP/dCMP deaminase, zinc-binding protein [Fulvimarina pelagi HTCC2506] gi|114538628|gb|EAU41749.1| CMP/dCMP deaminase, zinc-binding protein [Fulvimarina pelagi HTCC2506] Length = 148 Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 87/143 (60%), Positives = 108/143 (75%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ AA R E+PVGAV V + +II++AGN R KD TAHAE+LAIR C L Sbjct: 5 FMDEALEEARRAATRGEVPVGAVIVRDGEIIAKAGNETRAAKDPTAHAELLAIRRACLAL 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L + DLYVTLEPC MCA AIS ARIRRLY+GA++PKGG +ENG +F++ +TCHH+P Sbjct: 65 EAERLTDCDLYVTLEPCAMCAGAISFARIRRLYFGAADPKGGAVENGARFFSQSTCHHAP 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EIY G+SE S +++ FF ERR Sbjct: 125 EIYSGLSETASADLLKAFFAERR 147 >gi|15964553|ref|NP_384906.1| putative deaminase protein [Sinorhizobium meliloti 1021] gi|307314743|ref|ZP_07594339.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium meliloti BL225C] gi|307320037|ref|ZP_07599458.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium meliloti AK83] gi|15073731|emb|CAC45372.1| Putative tRNA-specific adenosine deaminase [Sinorhizobium meliloti 1021] gi|306894252|gb|EFN25017.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium meliloti AK83] gi|306898967|gb|EFN29613.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium meliloti BL225C] Length = 149 Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 86/149 (57%), Positives = 109/149 (73%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM AL+EA+ AA R E+P+GAV VL+ K+I+ AGNR REL D+TAHAEI AIR Sbjct: 1 MAETARFMQAALQEARKAAARGEVPIGAVVVLDGKMIAAAGNRTRELNDITAHAEIEAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + E L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FY Sbjct: 61 HAAAAVGDERLSGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYASP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCHH P++Y G++E+ + I+++FF RR Sbjct: 121 TCHHVPDVYSGLAEREAADILREFFAGRR 149 >gi|116250665|ref|YP_766503.1| nitrogen fixation symbiosis related protein [Rhizobium leguminosarum bv. viciae 3841] gi|115255313|emb|CAK06388.1| putative nitrogen fixation symbiosis related protein [Rhizobium leguminosarum bv. viciae 3841] Length = 151 Score = 187 bits (475), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 91/147 (61%), Positives = 112/147 (76%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K N FM ALEEA+ A R E+P+GAV V+++ +SR+GNR RELKDVTAHAEI AIR+ Sbjct: 2 KTNRFMEMALEEARAAGERGEVPIGAVVVVDDIAVSRSGNRTRELKDVTAHAEIAAIRLA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C L QE L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FY TC Sbjct: 62 CEALGQERLVGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYGQPTC 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 HH+PE+Y G +E +S +++ FF +RR Sbjct: 122 HHAPEVYSGFNEVQSADLLRKFFSQRR 148 >gi|227820996|ref|YP_002824966.1| putative cytidine and deoxycytidylate deaminase [Sinorhizobium fredii NGR234] gi|227339995|gb|ACP24213.1| putative cytidine and deoxycytidylate deaminase [Sinorhizobium fredii NGR234] Length = 150 Score = 186 bits (473), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 83/149 (55%), Positives = 109/149 (73%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M AL+EA+ AA R E+P+GAV VL+ ++++ AGNR REL+D+TAHAEI AIR Sbjct: 2 MAETTRYMDAALDEARKAAARGEVPIGAVVVLDGEVVAAAGNRTRELRDITAHAEIEAIR 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + E L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG +ENG +FY Sbjct: 62 QAAAAVGDERLSGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVENGVRFYGSP 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCHH P++Y G++E+ + +++ FF RR Sbjct: 122 TCHHVPDVYSGLAEREAADLLRAFFTARR 150 >gi|46370356|gb|AAS89964.1| deaminase [Agrobacterium vitis] Length = 149 Score = 186 bits (473), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 85/143 (59%), Positives = 107/143 (74%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A R E+P+GAV V + I+++AGN R L+DVTAHAEILAIR C IL Sbjct: 7 FMDVALEEARLAGARGEVPIGAVLVKDGVILAQAGNETRALQDVTAHAEILAIRRACTIL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPCTMCAAAIS ARIRRLYYGA + KGGG+++G +FY+ TCHH+P Sbjct: 67 EDERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAPDEKGGGVDHGARFYSQPTCHHAP 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++Y GI E + +++DFF +R Sbjct: 127 DVYAGIGETEAAALLKDFFTTKR 149 >gi|325292072|ref|YP_004277936.1| cytidine and deoxycytidylate deaminase [Agrobacterium sp. H13-3] gi|325059925|gb|ADY63616.1| cytidine and deoxycytidylate deaminase [Agrobacterium sp. H13-3] Length = 152 Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 87/149 (58%), Positives = 113/149 (75%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM AL EA+ A R E+P+GAV V++ ++I+R+GNR REL DVTAHAEI IR Sbjct: 1 MAERTHFMELALAEARAAGERQEVPIGAVLVMDGRVIARSGNRTRELNDVTAHAEIAVIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M C L QE LP DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG + +G +F++ Sbjct: 61 MACEALEQERLPGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVHSGVRFFSQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCHH+P++Y G++E S +I++ FF+E+R Sbjct: 121 TCHHAPDVYSGLAESESAEILRKFFREKR 149 >gi|86356480|ref|YP_468372.1| cytosine deaminase protein [Rhizobium etli CFN 42] gi|86280582|gb|ABC89645.1| cytosine deaminase protein [Rhizobium etli CFN 42] Length = 143 Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 84/139 (60%), Positives = 106/139 (76%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 ALEEA+ A R E+P+GAV V++ +SR+GNR RE DVTAHAEI AIR+ C L QE Sbjct: 2 ALEEARAAGERGEVPIGAVVVIDGIAVSRSGNRTRERNDVTAHAEIAAIRLACEALGQER 61 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130 L DLYVTLEPCTMC+AAIS ARIRRLYYGA +PKGG ++NG +FY TCHH+PE+Y Sbjct: 62 LAGADLYVTLEPCTMCSAAISFARIRRLYYGAEDPKGGAVDNGVRFYAQPTCHHAPEVYS 121 Query: 131 GISEQRSRQIIQDFFKERR 149 G +E +S +I++ FF ++R Sbjct: 122 GFNEVQSAEILRTFFSQKR 140 >gi|218515307|ref|ZP_03512147.1| cytosine deaminase protein [Rhizobium etli 8C-3] Length = 170 Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 90/147 (61%), Positives = 112/147 (76%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K N FM ALEEA+ A R E+P+GAV V+++ +SR+GNR REL DVTAHAEI AIR+ Sbjct: 5 KTNRFMEMALEEARAAGERGEVPIGAVVVVDDIAVSRSGNRTRELNDVTAHAEIAAIRLA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C L QE L DLYVTLEPCTMCAAAIS ARI RLYYGA +PKGG ++NG +FYT TC Sbjct: 65 CEALGQERLAGADLYVTLEPCTMCAAAISFARIHRLYYGAEDPKGGAVDNGVRFYTQPTC 124 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 HH+PE+Y G +E +S +I++ FF ++R Sbjct: 125 HHAPEVYSGFNEVQSAEILRTFFLQKR 151 >gi|150395640|ref|YP_001326107.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium medicae WSM419] gi|150027155|gb|ABR59272.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium medicae WSM419] Length = 149 Score = 184 bits (467), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 84/149 (56%), Positives = 107/149 (71%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM AL+EA+ AA R E+P+GAV V ++++ AGNR REL D+TAHAEI AIR Sbjct: 1 MTDTAPFMQAALQEARKAAARGEVPIGAVIVHEGEVVAAAGNRTRELNDITAHAEIEAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M + E L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FY+ Sbjct: 61 MAATAIGGERLSGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYSSP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCHH P++Y G++E+ + I++ FF RR Sbjct: 121 TCHHVPDVYSGLAEREAADILRAFFAARR 149 >gi|190890543|ref|YP_001977085.1| cytosine deaminase [Rhizobium etli CIAT 652] gi|190695822|gb|ACE89907.1| cytosine deaminase protein [Rhizobium etli CIAT 652] Length = 145 Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 88/142 (61%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA+ A R E+P+GAV V+++ +SR+GNR REL DVTAHAEI AIR+ C L Sbjct: 1 MEMALEEARAAGERGEVPIGAVVVVDDIAVSRSGNRTRELNDVTAHAEIAAIRLACEALG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 QE L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FYT TCHH+PE Sbjct: 61 QERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYTQPTCHHAPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G +E +S +I++ FF ++R Sbjct: 121 VYSGFNEVQSAEILRTFFLQKR 142 >gi|158424013|ref|YP_001525305.1| cytidine and deoxycytidylate deaminase family protein [Azorhizobium caulinodans ORS 571] gi|158330902|dbj|BAF88387.1| cytidine and deoxycytidylate deaminase family protein [Azorhizobium caulinodans ORS 571] Length = 147 Score = 181 bits (458), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 83/144 (57%), Positives = 108/144 (75%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL EA+ AA R E+PVGAV V N+++I+R GNR REL D TAHAE+ +R G + Sbjct: 4 TFMQTALSEARAAAERGEVPVGAVLVRNSQVIARDGNRTRELSDPTAHAEMQVLRAGAKA 63 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L E L DLYVTLEPC MCA AIS ARIRRLYYGA +PKGG +++G +F+T TCHH+ Sbjct: 64 LGAERLLTCDLYVTLEPCAMCAGAISFARIRRLYYGALDPKGGAVDSGPRFFTQPTCHHA 123 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P++Y GI+E+ S +I+++FF+ RR Sbjct: 124 PDVYGGIAERHSAEILRNFFQARR 147 >gi|154247024|ref|YP_001417982.1| CMP/dCMP deaminase zinc-binding [Xanthobacter autotrophicus Py2] gi|154161109|gb|ABS68325.1| CMP/dCMP deaminase zinc-binding [Xanthobacter autotrophicus Py2] Length = 147 Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 82/145 (56%), Positives = 108/145 (74%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL EA+ AA R E+PVGAV V ++I+R GNR REL D TAHAE+L +R Sbjct: 3 GTYMQMALNEARAAAERGEVPVGAVLVRGAEVIARDGNRTRELNDPTAHAEVLVLRTAGA 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L E L DLYVTLEPC MCAAA+S ARIRRLYYGAS+PKGGG+E+G +F++ TCHH Sbjct: 63 RLKSERLVNCDLYVTLEPCAMCAAALSFARIRRLYYGASDPKGGGVEHGPRFFSQPTCHH 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 PE+Y GI+E+++ ++++ FF++RR Sbjct: 123 MPEVYGGIAERQAAEVLRSFFQDRR 147 >gi|300024099|ref|YP_003756710.1| CMP/dCMP deaminase zinc-binding protein [Hyphomicrobium denitrificans ATCC 51888] gi|299525920|gb|ADJ24389.1| CMP/dCMP deaminase zinc-binding protein [Hyphomicrobium denitrificans ATCC 51888] Length = 145 Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 84/143 (58%), Positives = 106/143 (74%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 MS AL+EA+ AA R E+PVGAV V + ++ AGNR REL D TAHAEILAIR C +L Sbjct: 1 MSLALDEARAAAERGEVPVGAVIVSASGDVLVLAGNRTRELNDPTAHAEILAIRAACSVL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L + DLYVTLEPC MCAAAIS ARIRRLYYGA +PK GG+E+G + ++ TCHH+P Sbjct: 61 ETERLVDCDLYVTLEPCPMCAAAISFARIRRLYYGAGDPKSGGVEHGPRIFSQQTCHHAP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+YPG++E S +++ FF +R Sbjct: 121 EVYPGLAEPESAALLKSFFAAKR 143 >gi|118590701|ref|ZP_01548102.1| cytidine and deoxycytidylate deaminase [Stappia aggregata IAM 12614] gi|118436677|gb|EAV43317.1| cytidine and deoxycytidylate deaminase [Stappia aggregata IAM 12614] Length = 154 Score = 177 bits (449), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 80/143 (55%), Positives = 103/143 (72%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA AA R E+PVGAV V +I+R GNR EL D TAHAE+L IR C + Sbjct: 12 FMDLALEEAVKAADRGEVPVGAVLVRGGDVIARDGNRTLELNDPTAHAEVLVIRSACALA 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + LP+ DLYVTLEPC MCA AIS ARIRRLYYGA + KGG +++GT+F+ TCHH+P Sbjct: 72 GSQRLPDCDLYVTLEPCPMCAGAISFARIRRLYYGAGDEKGGAVDHGTRFFCQPTCHHAP 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++Y GI E R+ ++++ FF+ +R Sbjct: 132 DVYSGIGETRAGELLKTFFQAKR 154 >gi|240849921|ref|YP_002971310.1| cytidine and deoxycytidylate deaminase [Bartonella grahamii as4aup] gi|240267044|gb|ACS50632.1| cytidine and deoxycytidylate deaminase [Bartonella grahamii as4aup] Length = 148 Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 83/142 (58%), Positives = 100/142 (70%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ AA ++E+PVGAV II+RAGN + D T HAE+ AIRM C L Sbjct: 6 MEIALLEAQWAAKKDEVPVGAVITRGKAIIARAGNFIKSAYDPTGHAEMRAIRMACETLQ 65 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E LP+ DLYVTLEPC MCAAAIS ARIRRLYY ++PKGG IENG +FY TCHH PE Sbjct: 66 SERLPDCDLYVTLEPCAMCAAAISFARIRRLYYATNDPKGGAIENGPRFYQQPTCHHKPE 125 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IY G E+ + Q+++DFF ++R Sbjct: 126 IYSGFKEKEAAQLLKDFFVQKR 147 >gi|163867550|ref|YP_001608749.1| cytosine/adenosine deaminase [Bartonella tribocorum CIP 105476] gi|161017196|emb|CAK00754.1| Cytosine/adenosine deaminase [Bartonella tribocorum CIP 105476] Length = 148 Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 83/142 (58%), Positives = 99/142 (69%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ AA ++E+PVGAV II+RAGN + D T HAEI IRM C L Sbjct: 6 MEIALLEAQWAAKKDEVPVGAVITRGKTIIARAGNFIKTAYDPTGHAEIRVIRMACETLQ 65 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E LP+ DLYVTLEPC MCAAAIS ARIRRLYY ++PKGG IENG +FY TCHH PE Sbjct: 66 SERLPDCDLYVTLEPCAMCAAAISFARIRRLYYATNDPKGGAIENGPRFYQQPTCHHKPE 125 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IY G E+ + Q+++DFF ++R Sbjct: 126 IYSGFKEKEAAQLLKDFFIQKR 147 >gi|148253230|ref|YP_001237815.1| tRNA-adenosine deaminase [Bradyrhizobium sp. BTAi1] gi|146405403|gb|ABQ33909.1| tRNA-adenosine deaminase [Bradyrhizobium sp. BTAi1] Length = 148 Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 77/147 (52%), Positives = 106/147 (72%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K FM AL+ A++AA+ E+P+G V V +N +I+ A NR +D TAHAEILA+R Sbjct: 2 KSPSFMDLALKAAESAAISGEVPIGCVVVRDNAVIATAANRTLTDRDPTAHAEILALRQA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +++ E L + DLYVTLEPCTMCA AIS ARIRRLYYGA++PKGG +E+G +F+ TC Sbjct: 62 AQVIGSERLVDCDLYVTLEPCTMCAGAISFARIRRLYYGAADPKGGAVESGVRFFAAPTC 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 HH PE+Y + EQ++ ++++ FFK RR Sbjct: 122 HHVPEVYSAVGEQQAAEMLKAFFKARR 148 >gi|49475071|ref|YP_033112.1| nitrogen fixation protein [Bartonella henselae str. Houston-1] gi|49237876|emb|CAF27072.1| Nitrogen fixation protein [Bartonella henselae str. Houston-1] Length = 148 Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 81/142 (57%), Positives = 98/142 (69%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ AA ++E+PVGAV II RAGN + D T HAEI IRM C Sbjct: 6 MEIALLEAQWAAKKDEVPVGAVITRGQSIIVRAGNSIKAAYDPTGHAEIRVIRMACAAFQ 65 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E LP+ DLYVTLEPC MCAAAIS ARIRRLYY S+PKGG IE+G + Y +TCHHSPE Sbjct: 66 SERLPDCDLYVTLEPCAMCAAAISFARIRRLYYATSDPKGGAIEHGPRLYKQSTCHHSPE 125 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G E+ + Q+++DFF ++R Sbjct: 126 VYSGFKEKEAAQLLKDFFAQKR 147 >gi|90422427|ref|YP_530797.1| CMP/dCMP deaminase, zinc-binding [Rhodopseudomonas palustris BisB18] gi|90104441|gb|ABD86478.1| tRNA-adenosine deaminase [Rhodopseudomonas palustris BisB18] Length = 148 Score = 173 bits (439), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 80/143 (55%), Positives = 100/143 (69%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+ A+ A E+P+G V VLNN +I+ AGNR +D TAHAE+LAIR L Sbjct: 6 FMDLALKAAETAQNAGEVPIGCVIVLNNAVIASAGNRTLTDRDPTAHAEVLAIRQAAAAL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPCTMCA AIS ARIRRLYYGA++PKGG +E+G +F+ TCHH P Sbjct: 66 GSERLSGCDLYVTLEPCTMCAGAISFARIRRLYYGAADPKGGAVESGVRFFAQPTCHHVP 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y + E RS Q+++ FF+ RR Sbjct: 126 EVYSALGESRSAQMLRQFFQARR 148 >gi|307941692|ref|ZP_07657047.1| CMP/dCMP deaminase zinc-binding [Roseibium sp. TrichSKD4] gi|307775300|gb|EFO34506.1| CMP/dCMP deaminase zinc-binding [Roseibium sp. TrichSKD4] Length = 262 Score = 173 bits (438), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 84/143 (58%), Positives = 107/143 (74%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ AA R E+PVGAV V + K++++ GNR EL D TAHAE+L IR C L Sbjct: 117 FMDLALEEAEKAAARGEVPVGAVLVRDGKVLAKDGNRTLELNDPTAHAEVLVIRAACNTL 176 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + + LPE DLYVTLEPC MCA AIS ARIRRLYYGA + KGG +ENGT+F+ TCHH+P Sbjct: 177 ASQRLPECDLYVTLEPCPMCAGAISFARIRRLYYGAGDTKGGAVENGTRFFCQPTCHHAP 236 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y G EQ S ++++ FF+++R Sbjct: 237 EVYSGFQEQASAELLKSFFQKKR 259 >gi|75676735|ref|YP_319156.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Nitrobacter winogradskyi Nb-255] gi|74421605|gb|ABA05804.1| tRNA-adenosine deaminase [Nitrobacter winogradskyi Nb-255] Length = 148 Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 79/143 (55%), Positives = 100/143 (69%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE A+ A E+P+G V V + +II+ AGNR +D TAHAE+LA+R +L Sbjct: 6 FMDMALEAAEKAGQAGEVPIGCVIVRDGEIIAAAGNRTLTDRDPTAHAEVLALRAAAHVL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPCTMCAAAIS ARIRRLYYGAS+PKGG +E G +F+ TCHH P Sbjct: 66 GSERLTGCDLYVTLEPCTMCAAAISFARIRRLYYGASDPKGGAVEYGVRFFAAPTCHHRP 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y + E ++ +++DFFK RR Sbjct: 126 EVYSSVGESQAATLLRDFFKARR 148 >gi|319408052|emb|CBI81706.1| Cytosine/adenosine deaminase [Bartonella schoenbuchensis R1] Length = 161 Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 80/142 (56%), Positives = 101/142 (71%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ AA ++EIPVGAV + II+R GN + + D T HAEI AIR+ C IL Sbjct: 6 MEIALLEAQLAAKQDEIPVGAVIMRGKTIIARVGNYTKTVCDPTGHAEIRAIRIACEILQ 65 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E +P+ DLYVTLEPC MCAAAIS ARIRRLYY S+PKGG IE+G +FY TCHH PE Sbjct: 66 SERIPDCDLYVTLEPCAMCAAAISFARIRRLYYATSDPKGGAIEHGPRFYQQPTCHHIPE 125 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G E+ + ++++FF ++R Sbjct: 126 VYSGFKEKEASHLLKEFFAQKR 147 >gi|254473540|ref|ZP_05086936.1| cytosine deaminase [Pseudovibrio sp. JE062] gi|211957252|gb|EEA92456.1| cytosine deaminase [Pseudovibrio sp. JE062] Length = 148 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 78/145 (53%), Positives = 105/145 (72%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL EA+ A R E+P+G V V + K++S AGNR EL D TAHAE+LAIR + Sbjct: 3 STFMDMALNEARAAEARGEVPIGCVVVKDGKVLSAAGNRTLELNDPTAHAEVLAIREAGK 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L+ + L DLYVTLEPC MCAAAIS ARIRRLYYGA + KGGG+++G +FY+ TCHH Sbjct: 63 QLNSQRLEGCDLYVTLEPCPMCAAAISFARIRRLYYGAGDAKGGGVDHGVRFYSSPTCHH 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 +P++Y G++E S +++ FF+ +R Sbjct: 123 TPDVYSGLAETDSAAMLKTFFQGKR 147 >gi|146342901|ref|YP_001207949.1| putative cytidine and deoxycytidylate deaminase [Bradyrhizobium sp. ORS278] gi|146195707|emb|CAL79734.1| putative cytidine and deoxycytidylate deaminase [Bradyrhizobium sp. ORS278] Length = 148 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 76/143 (53%), Positives = 104/143 (72%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+ A++AA+ E+P+G V V + +I+ A NR +D TAHAEILA+R + + Sbjct: 6 FMDLALKAAESAAISGEVPIGCVVVRDGTVIAAAANRTLTDRDPTAHAEILALRQAAQAI 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L + DLYVTLEPCTMCA AIS ARIRRLYYGA++ KGG +E+G +F+ TCHH+P Sbjct: 66 GSERLIDCDLYVTLEPCTMCAGAISFARIRRLYYGAADSKGGAVESGVRFFAAPTCHHAP 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y + EQ+S Q++++FFK RR Sbjct: 126 EVYSAVGEQQSAQMLREFFKARR 148 >gi|92118638|ref|YP_578367.1| CMP/dCMP deaminase, zinc-binding [Nitrobacter hamburgensis X14] gi|91801532|gb|ABE63907.1| tRNA-adenosine deaminase [Nitrobacter hamburgensis X14] Length = 148 Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 75/143 (52%), Positives = 99/143 (69%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE A +A E+P+G V V + ++I+ AGNR +D TAHAE+LA+R + Sbjct: 6 FMDLALEAANSAGKSGEVPIGCVIVRDGEVIAAAGNRTLTDRDPTAHAEVLALRAAAHAI 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L + DLYVTLEPCTMCA AIS ARIRRLYYGA +PKGG +++G +F+ TCHH P Sbjct: 66 GSERLTDCDLYVTLEPCTMCAGAISFARIRRLYYGAPDPKGGAVDSGVRFFAAPTCHHRP 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+YP + E + +++DFFK RR Sbjct: 126 EVYPAVGESEAATLLRDFFKARR 148 >gi|49473908|ref|YP_031950.1| nitrogen fixation protein [Bartonella quintana str. Toulouse] gi|49239411|emb|CAF25749.1| Nitrogen fixation protein [Bartonella quintana str. Toulouse] Length = 148 Score = 170 bits (430), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 78/142 (54%), Positives = 97/142 (68%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ A ++E+PVGAV II+R GN + D T HAE+ IRM C Sbjct: 6 MEIALLEAQWAEKKDEVPVGAVITHGQSIIARTGNYIKAAYDPTGHAEMRVIRMACETFQ 65 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E LP+ DLYVTLEPC MCAAAIS ARIRRLYY S+PKGG IE+G +FY +TCHH PE Sbjct: 66 SERLPDCDLYVTLEPCAMCAAAISFARIRRLYYAISDPKGGAIEHGPRFYQQSTCHHRPE 125 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G E+ + Q+++DFF ++R Sbjct: 126 VYSGFKEKEAAQLLKDFFAQKR 147 >gi|319405143|emb|CBI78749.1| Cytosine/adenosine deaminase [Bartonella sp. AR 15-3] Length = 150 Score = 170 bits (430), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 76/142 (53%), Positives = 100/142 (70%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ+A ++E+PVGAV II+RAGN ++ D T HAE+ IR+ C+I Sbjct: 6 MEIALLEAQSAKKQDEVPVGAVITHGQTIIARAGNYTKKSHDPTGHAEMRVIRIACQIFK 65 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E +PE DLYVTLEPCTMCAAAIS ARIR LYY + KGG IE+G++FY +TCHH P Sbjct: 66 SERIPECDLYVTLEPCTMCAAAISFARIRNLYYATKDSKGGAIEHGSRFYQQSTCHHKPN 125 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G E+ + Q+++DFF ++R Sbjct: 126 VYSGFKEKEASQLLKDFFIQKR 147 >gi|299134221|ref|ZP_07027414.1| CMP/dCMP deaminase zinc-binding [Afipia sp. 1NLS2] gi|298590968|gb|EFI51170.1| CMP/dCMP deaminase zinc-binding [Afipia sp. 1NLS2] Length = 148 Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 76/143 (53%), Positives = 105/143 (73%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL++A+ AA E+P+G V V + +I++AGNR +D TAHAE++A+R R L Sbjct: 6 FMDLALKQAEIAASGGEVPIGCVVVHDGAVIAQAGNRTLADRDPTAHAEMVALREAARKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 +E L + DLYVTLEPCTMCA AIS ARIRRLYYGA +PKGG I++G +F+ TCHH P Sbjct: 66 GRERLTDCDLYVTLEPCTMCAGAISHARIRRLYYGALDPKGGAIDSGVRFFGSPTCHHVP 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++YP + E+++ +++DFFK RR Sbjct: 126 DVYPAVGEEQAAALLRDFFKARR 148 >gi|126735087|ref|ZP_01750833.1| hypothetical protein RCCS2_14459 [Roseobacter sp. CCS2] gi|126715642|gb|EBA12507.1| hypothetical protein RCCS2_14459 [Roseobacter sp. CCS2] Length = 148 Score = 167 bits (424), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 79/143 (55%), Positives = 102/143 (71%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ AL+EA+ A R E+PVGAV V + ++++AGN+ RE D TAHAE+LAIR C L Sbjct: 6 YMNVALDEARVAGARGEVPVGAVIVGPDGVVAQAGNQTRERSDPTAHAEVLAIRAACAAL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 QE L DLYVTLEPC MCAAAIS ARI RLYYGA++PK GG+ G + ++ A CHH P Sbjct: 66 GQERLIRCDLYVTLEPCPMCAAAISNARIARLYYGAADPKSGGVAQGPRVFSHAQCHHVP 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GI + S +++DFF RR Sbjct: 126 EVYDGIGAKASEALLKDFFAGRR 148 >gi|27382607|ref|NP_774136.1| nitrogen fixation protein [Bradyrhizobium japonicum USDA 110] gi|27355779|dbj|BAC52761.1| nitrogen fixation protein [Bradyrhizobium japonicum USDA 110] Length = 152 Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 74/147 (50%), Positives = 104/147 (70%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K FM AL+ A+NA E+P+G V V N ++I+ A NR D TAHAEI+A+R Sbjct: 6 KAPSFMDLALKTAENAGKAGEVPIGCVVVRNYEVIATAANRTLTDYDPTAHAEIVALREA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + E L + DLYVTLEPCTMCA AIS AR+RRLYYGA++PKGG +E+G +F+ TC Sbjct: 66 AKKIGSERLVDCDLYVTLEPCTMCAGAISFARVRRLYYGAADPKGGAVESGVRFFASPTC 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 HH+P++Y G+ E + +++++FF+ERR Sbjct: 126 HHAPDVYSGVGESEAARLLKEFFRERR 152 >gi|119386848|ref|YP_917903.1| CMP/dCMP deaminase, zinc-binding [Paracoccus denitrificans PD1222] gi|119377443|gb|ABL72207.1| CMP/dCMP deaminase, zinc-binding protein [Paracoccus denitrificans PD1222] Length = 149 Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 81/143 (56%), Positives = 103/143 (72%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA+ AA R E+PVGAV V + +++RAGNR RE++D TAHAEILAIR C L Sbjct: 7 MPTALDEARAAARRGEVPVGAVLVGADGAVLARAGNRTREMRDPTAHAEILAIRAACAHL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E LP L+VTLEPC MCAAAIS ARI LYYGA +P+ GG+ +G + + CHH P Sbjct: 67 GSERLPGARLWVTLEPCPMCAAAISAARIEMLYYGAEDPRMGGVRHGARVFDHPQCHHRP 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GIS + SR+++Q+FF+ERR Sbjct: 127 EIIDGISAEESRRLLQEFFRERR 149 >gi|209886356|ref|YP_002290213.1| tRNA-specific adenosine deaminase [Oligotropha carboxidovorans OM5] gi|209874552|gb|ACI94348.1| tRNA-specific adenosine deaminase [Oligotropha carboxidovorans OM5] Length = 181 Score = 167 bits (422), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 78/143 (54%), Positives = 99/143 (69%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +AQNA E+P+G V V N +I+ AGNR +D TAHAE+LA+R L Sbjct: 39 FMDLALRQAQNAEANGEVPIGCVVVQNGTVIAAAGNRTITDRDPTAHAEMLALREAASKL 98 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 +E L + DLYVTLEPCTMCA AIS ARIRRLYYGA +PKGG I++G +F+ TCHH P Sbjct: 99 GRERLADCDLYVTLEPCTMCAGAISHARIRRLYYGALDPKGGAIDSGVRFFAQPTCHHVP 158 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y + E + +++DFFK RR Sbjct: 159 EVYSAVGEAEAAALLRDFFKTRR 181 >gi|13476818|ref|NP_108387.1| nitrogen fixation protein gene [Mesorhizobium loti MAFF303099] gi|14027579|dbj|BAB53848.1| nitrogen fixation protein gene [Mesorhizobium loti MAFF303099] Length = 149 Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 85/149 (57%), Positives = 110/149 (73%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK+ + FM+ AL+EA+ AALR E+PVGAV + ++++AGNR REL D TAHAE+L IR Sbjct: 1 MKRPD-FMALALKEAEAAALRGEVPVGAVIANGSTVVAKAGNRTRELADPTAHAEMLVIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C LS E L DLYVTLEPC MCA AIS AR+RRLY+GA + KGG + NG +F+ Sbjct: 60 EACGKLSSERLTGHDLYVTLEPCAMCAGAISFARLRRLYFGAPDEKGGAVVNGVRFFASP 119 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCHH+P+IYPG+ E + +++DFFKERR Sbjct: 120 TCHHTPDIYPGMGETEAALLLKDFFKERR 148 >gi|298293867|ref|YP_003695806.1| CMP/dCMP deaminase zinc-binding protein [Starkeya novella DSM 506] gi|296930378|gb|ADH91187.1| CMP/dCMP deaminase zinc-binding protein [Starkeya novella DSM 506] Length = 172 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 80/143 (55%), Positives = 101/143 (70%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA A R E+PVGAV V ++ GNR REL D TAHAE++ IR +L Sbjct: 25 FMLLALAEAAKAGARGEVPVGAVLVRGGTALAAEGNRMRELADPTAHAEMMVIRAAASVL 84 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L E DLYVTLEPCTMCA AIS AR+RR+YYGA +PKGG +ENG +F++ ATCHH P Sbjct: 85 GSDRLAECDLYVTLEPCTMCAGAISFARLRRIYYGAPDPKGGAVENGVRFFSQATCHHRP 144 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E Y G+ E+ S +++++FF ERR Sbjct: 145 EAYGGLGERESAELLREFFAERR 167 >gi|83309336|ref|YP_419600.1| cytosine/adenosine deaminase [Magnetospirillum magneticum AMB-1] gi|82944177|dbj|BAE49041.1| Cytosine/adenosine deaminase [Magnetospirillum magneticum AMB-1] Length = 148 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 83/146 (56%), Positives = 107/146 (73%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 G FM+ AL EA+ A+ R E+PVGAV V + ++I++AGNR EL D TAHAE+LA+R Sbjct: 3 GPGFMTLALAEAEAASARGEVPVGAVIVKDGQVIAQAGNRVEELGDSTAHAEMLALRAAT 62 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L + L + DLYVTLEPC MCAAAISLARIRRLY+GA +PK GG+E+G + + ATCH Sbjct: 63 LFLGDKRLEDCDLYVTLEPCPMCAAAISLARIRRLYFGAYDPKSGGVEHGAKVFDHATCH 122 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H PE+Y G+ E+RS ++ FF ERR Sbjct: 123 HRPEVYGGLEERRSASLLSRFFAERR 148 >gi|254502430|ref|ZP_05114581.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Labrenzia alexandrii DFL-11] gi|222438501|gb|EEE45180.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Labrenzia alexandrii DFL-11] Length = 155 Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 83/145 (57%), Positives = 103/145 (71%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM ALEEA AA R E+PVGAV V N +I++R GNR EL D TAHAE+L IR C Sbjct: 11 KTFMDLALEEAAAAAERGEVPVGAVLVRNGEIVARDGNRTLELNDPTAHAEVLVIRAACA 70 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + LP+ DLYVTLEPC MCA AIS ARIRRLYYGA + KGG +++GT+F+ CHH Sbjct: 71 ALQSQRLPKCDLYVTLEPCAMCAGAISFARIRRLYYGAGDEKGGAVDHGTRFFHQPICHH 130 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 +PE Y GI E++S +++ FF+ RR Sbjct: 131 APETYAGIGERQSAALLKAFFQGRR 155 >gi|304393183|ref|ZP_07375111.1| tRNA-specific adenosine deaminase [Ahrensia sp. R2A130] gi|303294190|gb|EFL88562.1| tRNA-specific adenosine deaminase [Ahrensia sp. R2A130] Length = 153 Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 74/143 (51%), Positives = 100/143 (69%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+ AA R E+PVGAV V + +++++AGNR EL D +AHAE+L IR C Sbjct: 11 FMEQALVEARAAAERGEVPVGAVLVRDGEVVAKAGNRTLELHDPSAHAELLVIRQACAAA 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + LP+ DLYVTLEPCT+CA AIS ARIRR+Y+ A + KGG + NG +F+ TCHH P Sbjct: 71 KSQRLPDCDLYVTLEPCTLCATAISFARIRRVYFAADDAKGGAVTNGVRFFDQPTCHHEP 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y G+ E + ++++ FF RR Sbjct: 131 EVYSGMCEVEAGELLRSFFAARR 153 >gi|91975752|ref|YP_568411.1| CMP/dCMP deaminase, zinc-binding [Rhodopseudomonas palustris BisB5] gi|91682208|gb|ABE38510.1| tRNA-adenosine deaminase [Rhodopseudomonas palustris BisB5] Length = 148 Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 76/143 (53%), Positives = 99/143 (69%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL A A E+P+G V V ++I+ AGNR +D TAHAE+LAIR + L Sbjct: 6 FMDLALAAANIAGRSGEVPIGCVIVRGGEVIATAGNRTLTDRDPTAHAELLAIREAAQKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E LP+ DLYVTLEPCTMCA AIS ARIRRLY+GA +PKGG +E+G +F+ TCHH+P Sbjct: 66 GSERLPDCDLYVTLEPCTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFFGQPTCHHAP 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y G+ E+ + +++ FFK RR Sbjct: 126 EVYSGVGEREAAAMLRAFFKARR 148 >gi|319406589|emb|CBI80231.1| Cytosine/adenosine deaminase [Bartonella sp. 1-1C] Length = 150 Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 77/142 (54%), Positives = 96/142 (67%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ A ++EIPVGAV II+RAGN + D T HAE+ IR+ C+I Sbjct: 6 MEIALLEAQLAKKQDEIPVGAVITHGQTIIARAGNYIKTPHDPTGHAEMRVIRIACQIFK 65 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E +PE DLYVTLEPC MCAA IS ARIR LYY S+PKGG IE+G +FY TCHH P Sbjct: 66 SERIPECDLYVTLEPCAMCAATISFARIRNLYYATSDPKGGAIEHGPRFYQQQTCHHRPN 125 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G E+ + Q+++DFF ++R Sbjct: 126 VYSGFKEKEASQLLKDFFIQKR 147 >gi|511885|gb|AAA96138.1| nitrogen fixation protein [Bradyrhizobium japonicum] Length = 142 Score = 164 bits (415), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 72/142 (50%), Positives = 102/142 (71%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+ A+NA E+P+G V V N ++I+ A NR D TAHAEI+A+R + + Sbjct: 1 MDLALKTAENAGKAGEVPIGCVVVRNYEVIATAANRTLTDYDPTAHAEIVALREAAKKIG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPCTMCA AIS AR+RRLYYGA++PKGG +E+G +F+ TCHH+P+ Sbjct: 61 SERLVDCDLYVTLEPCTMCAGAISFARVRRLYYGAADPKGGAVESGVRFFASPTCHHAPD 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G+ E + +++++FF+ERR Sbjct: 121 VYSGVGESEAARLLKEFFRERR 142 >gi|319403672|emb|CBI77257.1| Cytosine/adenosine deaminase [Bartonella rochalimae ATCC BAA-1498] Length = 150 Score = 163 bits (413), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 76/142 (53%), Positives = 97/142 (68%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ+A ++EIPVGAV II+RAGN + D T HAE+ IR+ C+I Sbjct: 6 MEIALLEAQSAKKQDEIPVGAVITHGQTIIARAGNYIKNPHDPTGHAEMRVIRIACQIFK 65 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E +PE D+YVTLEPC MCAAAIS ARIR LYY S+ KGG IE+G +FY TCHH P Sbjct: 66 SERIPECDIYVTLEPCAMCAAAISFARIRNLYYATSDSKGGAIEHGPRFYQQPTCHHRPN 125 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G E+ + Q+++DFF ++R Sbjct: 126 VYSGFKEKEASQLLKDFFIQKR 147 >gi|89053709|ref|YP_509160.1| CMP/dCMP deaminase, zinc-binding [Jannaschia sp. CCS1] gi|88863258|gb|ABD54135.1| CMP/dCMP deaminase zinc-binding protein [Jannaschia sp. CCS1] Length = 142 Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 79/142 (55%), Positives = 96/142 (67%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL++A+ AA R E+PVGAV N +II+RAGNR RE D T HAEILAIR C L Sbjct: 1 MEAALDQARQAAARGEVPVGAVISRNGEIIARAGNRTREDHDPTGHAEILAIRSACAALQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E LP DL+VTLEPC CAA IS ARIRRLYY A +PK GGI G + +T HH PE Sbjct: 61 SERLPGCDLWVTLEPCPACAATISAARIRRLYYAAPDPKSGGIAQGPRIFTHPQAHHVPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IY G+ E+ + +++DFF +R Sbjct: 121 IYTGLLEEEAATLLRDFFAGKR 142 >gi|319784273|ref|YP_004143749.1| CMP/dCMP deaminase zinc-binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170161|gb|ADV13699.1| CMP/dCMP deaminase zinc-binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 149 Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 84/149 (56%), Positives = 109/149 (73%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK+ + FM+ AL+EA+ AALR E+PVGAV +++ AGNR REL D TAHAE+L IR Sbjct: 1 MKRPD-FMALALKEAEAAALRGEVPVGAVIANGAGVVASAGNRTRELADPTAHAEMLVIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR LS E L DLYVTLEPC MCA AIS AR+RRLY+GA++ KGG + NG +F+ Sbjct: 60 EACRKLSAERLTGHDLYVTLEPCAMCAGAISFARLRRLYFGAADDKGGAVVNGVRFFASP 119 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCHH+P+IYPG+ E + +++ FF+ERR Sbjct: 120 TCHHAPDIYPGMGETEAGLLLKGFFRERR 148 >gi|110632788|ref|YP_672996.1| CMP/dCMP deaminase, zinc-binding [Mesorhizobium sp. BNC1] gi|110283772|gb|ABG61831.1| CMP/dCMP deaminase, zinc-binding protein [Chelativorans sp. BNC1] Length = 171 Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 81/143 (56%), Positives = 106/143 (74%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ AA R E+PVGAV V + ++++ AGNR REL D TAHAE+LAIR C Sbjct: 28 FMDAALQEARRAAARAEVPVGAVVVRDGRLLASAGNRTRELNDPTAHAEMLAIRAACEAE 87 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPC MCA AIS ARIRRLY+GAS+PKGGG+ +G +F+T TCHH+P Sbjct: 88 GAERLIGADLYVTLEPCAMCAGAISFARIRRLYFGASDPKGGGVIHGGRFFTQPTCHHAP 147 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y G+ E+ + ++++FF +R Sbjct: 148 EVYEGLGEREAATLLKNFFAGKR 170 >gi|260463254|ref|ZP_05811455.1| CMP/dCMP deaminase zinc-binding [Mesorhizobium opportunistum WSM2075] gi|259030844|gb|EEW32119.1| CMP/dCMP deaminase zinc-binding [Mesorhizobium opportunistum WSM2075] Length = 149 Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 83/149 (55%), Positives = 110/149 (73%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK+ + FM+ AL+EA+ AALR E+PVGAV +++ AGNR REL D TAHAE+LAIR Sbjct: 1 MKRPD-FMAVALKEAEAAALRGEVPVGAVIASGGTVVASAGNRTRELADPTAHAEMLAIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C L+ E L DLYVTLEPC MCA AIS AR+RRLY+GA++ KGG + NG +F+ Sbjct: 60 EACGKLATERLTGHDLYVTLEPCAMCAGAISFARLRRLYFGAADEKGGAVVNGVRFFASP 119 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCHH+P+IYPG++E + +++ FF+ERR Sbjct: 120 TCHHAPDIYPGMAETEAGLLLKGFFRERR 148 >gi|288958823|ref|YP_003449164.1| CMP/dCMP deaminase [Azospirillum sp. B510] gi|288911131|dbj|BAI72620.1| CMP/dCMP deaminase [Azospirillum sp. B510] Length = 150 Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 75/131 (57%), Positives = 97/131 (74%), Gaps = 2/131 (1%) Query: 21 RNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78 R E+PVGAV V +++ AGNR EL D +AHAE+LAIR C Q LP DLYV Sbjct: 20 RGEVPVGAVIVDAATGTVLASAGNRTEELCDPSAHAELLAIRAACAERRQPRLPGCDLYV 79 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 TLEPC +CAAAIS ARIRR+YYGA +PKGG +++G +F+T ATCHH+PE+Y GI E R+ Sbjct: 80 TLEPCALCAAAISFARIRRVYYGAYDPKGGAVDHGPRFFTQATCHHAPEVYSGIGETRAS 139 Query: 139 QIIQDFFKERR 149 +++DFF++RR Sbjct: 140 LLLRDFFRKRR 150 >gi|121602446|ref|YP_989463.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Bartonella bacilliformis KC583] gi|120614623|gb|ABM45224.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Bartonella bacilliformis KC583] Length = 148 Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 77/142 (54%), Positives = 96/142 (67%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ AA + E+PVGAV IISRAGN ++ D T HAEI IRM C L Sbjct: 6 MEIALLEAQLAAEKGEVPVGAVITRGKTIISRAGNSIKKPYDPTGHAEIRVIRMACETLK 65 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E LP+ +LYVTLEPC MCAAAIS RI+ LYY AS+ KGG IE+G + Y TCHH P+ Sbjct: 66 SERLPDCNLYVTLEPCAMCAAAISFTRIQHLYYAASDSKGGAIEHGPRLYQQPTCHHRPD 125 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G E+ + Q+++DFF ++R Sbjct: 126 VYSGFKEREAIQLLKDFFAQKR 147 >gi|220926362|ref|YP_002501664.1| CMP/dCMP deaminase [Methylobacterium nodulans ORS 2060] gi|219950969|gb|ACL61361.1| CMP/dCMP deaminase zinc-binding [Methylobacterium nodulans ORS 2060] Length = 158 Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 71/128 (55%), Positives = 94/128 (73%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV + +++ AGNR R L+D TAHAEILAIR C+ + E L DLYVTLE Sbjct: 30 GEVPVGAVVMRGGTVLAVAGNRPRALRDPTAHAEILAIRAACQAIGDERLAGCDLYVTLE 89 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AIS ARIRRLY+ A++PKGG +ENG + ++ TCHH+PE+Y G+ E + ++ Sbjct: 90 PCAMCAGAISFARIRRLYFAAADPKGGAVENGPRLFSQPTCHHAPEVYGGLREAEAAALL 149 Query: 142 QDFFKERR 149 +DFF+ERR Sbjct: 150 RDFFRERR 157 >gi|85717177|ref|ZP_01048135.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Nitrobacter sp. Nb-311A] gi|85696010|gb|EAQ33910.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Nitrobacter sp. Nb-311A] Length = 142 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 80/142 (56%), Positives = 100/142 (70%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALE A+ A E+P+G V V + ++I+ AGNR +D TAHAEILA+R + L Sbjct: 1 MDMALEAAKKAGQAGEVPIGCVIVRDGEVIATAGNRTLTDRDPTAHAEILALRAAAQALG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L DLYVTLEPCTMCAAAIS ARIRRLYYGAS+PKGG +E+G +F TCHH PE Sbjct: 61 SERLTGCDLYVTLEPCTMCAAAISFARIRRLYYGASDPKGGAVESGVRFLAAPTCHHRPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +YP + E R+ +++DFFK RR Sbjct: 121 VYPSVGESRAAALLRDFFKTRR 142 >gi|23016531|ref|ZP_00056286.1| COG0590: Cytosine/adenosine deaminases [Magnetospirillum magnetotacticum MS-1] Length = 145 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 85/145 (58%), Positives = 110/145 (75%), Gaps = 1/145 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM+ AL EA+ A R E+PVGAV V + +II+RAGNR EL D TAHAE+LAIR Sbjct: 2 SAFMAQALAEAEAAGARGEVPVGAVVVQDGRIIARAGNRVEELGDPTAHAEMLAIRAAT- 60 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 +L + L + DLYVTLEPC MCAAAISLARIRRLY+GA +PK GG+E+G++ + ATCHH Sbjct: 61 VLGDKRLEDCDLYVTLEPCPMCAAAISLARIRRLYFGAYDPKSGGVEHGSKVFDHATCHH 120 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 PE+Y G+ E+RS ++++ FF ERR Sbjct: 121 RPEVYGGLEERRSAELLRVFFAERR 145 >gi|84515288|ref|ZP_01002650.1| hypothetical protein SKA53_01481 [Loktanella vestfoldensis SKA53] gi|84510571|gb|EAQ07026.1| hypothetical protein SKA53_01481 [Loktanella vestfoldensis SKA53] Length = 148 Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 81/142 (57%), Positives = 99/142 (69%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EA+ AA R E+PVGAV + II++AGNR REL D TAHAE+LAIR C L Sbjct: 7 MDIALTEARAAAARGEVPVGAVITQDGAIIAQAGNRTRELNDPTAHAEMLAIRAACAALG 66 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 QE L DLYVTLEPC MCAAAIS ARI RLYY A++PK GG+ G + +T CHH P+ Sbjct: 67 QERLTGCDLYVTLEPCPMCAAAISNARIARLYYAAADPKSGGVAQGPRIFTHPQCHHRPD 126 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y GIS + Q+++DFF +R Sbjct: 127 VYDGISATAAEQLLRDFFAAKR 148 >gi|218532085|ref|YP_002422901.1| CMP/dCMP deaminase zinc-binding [Methylobacterium chloromethanicum CM4] gi|218524388|gb|ACK84973.1| CMP/dCMP deaminase zinc-binding [Methylobacterium chloromethanicum CM4] Length = 147 Score = 160 bits (404), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 74/128 (57%), Positives = 91/128 (71%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGA V + +++ AGNR R L D TAHAEILAIR C LS E L DLYVTLE Sbjct: 19 GEVPVGAAVVRDGAVLAVAGNRPRTLCDPTAHAEILAIRAACAALSDERLTGCDLYVTLE 78 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI+ ARIRRLYY AS+PKGGG+E+G + + TCHH+PE+Y G E + ++ Sbjct: 79 PCPMCAGAIAFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFREGEAAGLL 138 Query: 142 QDFFKERR 149 +DFF ERR Sbjct: 139 RDFFAERR 146 >gi|170744112|ref|YP_001772767.1| CMP/dCMP deaminase zinc-binding [Methylobacterium sp. 4-46] gi|168198386|gb|ACA20333.1| CMP/dCMP deaminase zinc-binding [Methylobacterium sp. 4-46] Length = 158 Score = 159 bits (403), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 71/128 (55%), Positives = 95/128 (74%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGA V + +++ AGNR R L+D TAHAEILAIR CR + E L DLYVTLE Sbjct: 30 GEVPVGAAIVRDGTVLAVAGNRPRTLRDPTAHAEILAIRAACRAIGDERLIGCDLYVTLE 89 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCAAAISLAR+RRLY+ A++PKGG +E+G +F+ TCHH+PE+Y G+ E + ++ Sbjct: 90 PCGMCAAAISLARLRRLYFAAADPKGGAVEHGPRFFAQPTCHHAPEVYGGLRESEAASLL 149 Query: 142 QDFFKERR 149 ++FF+ RR Sbjct: 150 REFFRARR 157 >gi|149200864|ref|ZP_01877839.1| hypothetical protein RTM1035_14602 [Roseovarius sp. TM1035] gi|149145197|gb|EDM33223.1| hypothetical protein RTM1035_14602 [Roseovarius sp. TM1035] Length = 153 Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 80/144 (55%), Positives = 101/144 (70%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL+EA+ AA R E+PVGAV V + I +RAGNR REL D TAHAEILAIR C Sbjct: 6 YMDIALDEARAAAARGEVPVGAVIVTPSGAIAARAGNRTRELSDPTAHAEILAIRAACAA 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L E LP DLYVTLEPC MCA+AI+ RI RLYYGA++PK GG+ G + ++ CHH Sbjct: 66 LGSERLPGHDLYVTLEPCAMCASAIAATRIARLYYGAADPKSGGVAMGARVFSHPQCHHV 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PEIY GI+ + +++ FF++RR Sbjct: 126 PEIYDGIAATEAETLLKTFFRDRR 149 >gi|296446445|ref|ZP_06888389.1| CMP/dCMP deaminase zinc-binding [Methylosinus trichosporium OB3b] gi|296256080|gb|EFH03163.1| CMP/dCMP deaminase zinc-binding [Methylosinus trichosporium OB3b] Length = 183 Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 72/127 (56%), Positives = 94/127 (74%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGA V N II+ AGNR +D TAHAE+LAIR C L E L + DLYVTLEP Sbjct: 57 EVPVGATIVRNGAIIAVAGNRTLRDRDPTAHAEMLAIRAACATLRTERLTDCDLYVTLEP 116 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCAAAIS ARIRRLY+GA +PKGGG+E+G + ++ TCHH+PE+Y G+ E+ + ++++ Sbjct: 117 CAMCAAAISFARIRRLYFGAEDPKGGGVEHGARVFSQKTCHHAPEVYGGLREREAAELLR 176 Query: 143 DFFKERR 149 FF+ RR Sbjct: 177 AFFQARR 183 >gi|328545044|ref|YP_004305153.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [polymorphum gilvum SL003B-26A1] gi|326414788|gb|ADZ71851.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Polymorphum gilvum SL003B-26A1] Length = 176 Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 79/143 (55%), Positives = 104/143 (72%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+NAA R E+PVGAV V + ++++ GNR EL D TAHAE+L IR C L Sbjct: 34 FMDLALAEARNAAARGEVPVGAVLVCDGRVVAADGNRTLELNDPTAHAEMLVIRAACAAL 93 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L DLYVTLEPC MCA AIS ARIRRLYYGA + KGG +++G +F+ TCHH+P Sbjct: 94 GSQRLSGCDLYVTLEPCPMCAGAISFARIRRLYYGAGDEKGGAVDHGVRFFASPTCHHAP 153 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GI E+ + ++++DFF++RR Sbjct: 154 EVYAGIGERPAGELLKDFFRDRR 176 >gi|114773341|ref|ZP_01450545.1| hypothetical protein OM2255_12392 [alpha proteobacterium HTCC2255] gi|114546275|gb|EAU49186.1| hypothetical protein OM2255_12392 [alpha proteobacterium HTCC2255] Length = 150 Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 83/149 (55%), Positives = 97/149 (65%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM A+ EA+ AA R E+PVGA+ +N +IIS AGNR RELKD TAHAEIL IR Sbjct: 1 MNNFTSFMPIAIIEAKKAASRGEVPVGALIEINGEIISSAGNRTRELKDPTAHAEILVIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C IL E L +LYVTLEPC MCAAAIS RI LY+GA + K GGI G + Sbjct: 61 NACSILGVERLIGANLYVTLEPCPMCAAAISNTRIANLYFGARDIKSGGINQGPCIFNHP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 HH PEIY GISE R+++ DFFK +R Sbjct: 121 QSHHKPEIYDGISELECRKLLLDFFKHKR 149 >gi|115522956|ref|YP_779867.1| CMP/dCMP deaminase, zinc-binding [Rhodopseudomonas palustris BisA53] gi|115516903|gb|ABJ04887.1| tRNA-adenosine deaminase [Rhodopseudomonas palustris BisA53] Length = 148 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 72/128 (56%), Positives = 94/128 (73%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+P+G V V + ++I+ A NR +D TAHAEILAIR L E L + DLYVTLE Sbjct: 21 GEVPIGCVIVRDGEVIATAHNRTLSDRDPTAHAEILAIRQAAASLGSERLVDCDLYVTLE 80 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PCTMCA AISLARIRRLYYGAS+PKGG +E+G +F+ TCHH+PE+Y + E+RS ++ Sbjct: 81 PCTMCAGAISLARIRRLYYGASDPKGGAVESGARFFAQPTCHHAPEVYSAVGERRSATLL 140 Query: 142 QDFFKERR 149 ++FF+ RR Sbjct: 141 REFFQARR 148 >gi|154251101|ref|YP_001411925.1| zinc-binding CMP/dCMP deaminase [Parvibaculum lavamentivorans DS-1] gi|154155051|gb|ABS62268.1| CMP/dCMP deaminase zinc-binding [Parvibaculum lavamentivorans DS-1] Length = 164 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 75/130 (57%), Positives = 96/130 (73%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+PVGAV V ++++RAGNR ELKD TAHAE+LAIR C + E L DLYVT Sbjct: 34 RGEVPVGAVVVDGEGRVLARAGNRTLELKDPTAHAELLAIRAACAEIGSERLIGCDLYVT 93 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA AIS ARIRRLYYGA++ KGGG+++G + +T TCHH P++Y GI E+RS + Sbjct: 94 LEPCAMCATAISFARIRRLYYGAADEKGGGVDHGPRIFTQPTCHHRPDVYGGIGERRSAE 153 Query: 140 IIQDFFKERR 149 +++ FF RR Sbjct: 154 LLRSFFALRR 163 >gi|319898379|ref|YP_004158472.1| Cytosine/adenosine deaminase [Bartonella clarridgeiae 73] gi|319402343|emb|CBI75882.1| Cytosine/adenosine deaminase [Bartonella clarridgeiae 73] Length = 150 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 75/142 (52%), Positives = 94/142 (66%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ+A + EIPVGAV II+RAGN + D T HAE+ IR+ C+I Sbjct: 6 MEIALLEAQSAKKQAEIPVGAVITHGKTIIARAGNYIKTPYDPTGHAEMRVIRIACQIFK 65 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E +PE DLYVTLEPC MCAAAIS ARIR LYY + KGG IE+G +FY TCHH P Sbjct: 66 SERIPECDLYVTLEPCAMCAAAISFARIRNLYYATQDSKGGAIEHGPRFYQQPTCHHRPN 125 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G E+ + +++DFF ++R Sbjct: 126 VYSGFKEREATLLLKDFFSQKR 147 >gi|310816563|ref|YP_003964527.1| cytidine and deoxycytidylate deaminase family protein [Ketogulonicigenium vulgare Y25] gi|308755298|gb|ADO43227.1| cytidine and deoxycytidylate deaminase family protein [Ketogulonicigenium vulgare Y25] Length = 150 Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 74/144 (51%), Positives = 101/144 (70%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M ALEEA+ AA+R E+PVGAV + + +II+RAGNR REL D TAHAE+LAIR C + Sbjct: 6 YMIHALEEAKLAAMRGEVPVGAVVIGPSGQIIARAGNRTRELHDPTAHAEVLAIRAACAV 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + E L + DLYVTLEPC +CA I+ ARIRRLY+GA +PK GG+ +G + + CHH Sbjct: 66 IGSERLIDHDLYVTLEPCPICAGTIAAARIRRLYFGAEDPKSGGVLHGARVFNHPQCHHR 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+Y + + +++DFF +R Sbjct: 126 PEVYGDLGAPEAETLLRDFFAAKR 149 >gi|188583522|ref|YP_001926967.1| CMP/dCMP deaminase zinc-binding [Methylobacterium populi BJ001] gi|179347020|gb|ACB82432.1| CMP/dCMP deaminase zinc-binding [Methylobacterium populi BJ001] Length = 147 Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 72/128 (56%), Positives = 90/128 (70%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V + +++ A NR R L D TAHAEILAIR C L E L DLYVTLE Sbjct: 19 GEVPVGAVVVRDGAVLAVASNRPRALSDPTAHAEILAIRAACAALRDERLTGCDLYVTLE 78 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI+ ARIRRLYY AS+PKGGG+E+G + + TCHH+PE+Y G E + ++ Sbjct: 79 PCPMCAGAIAFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFREGEAAGLL 138 Query: 142 QDFFKERR 149 +DFF +RR Sbjct: 139 RDFFSQRR 146 >gi|163853270|ref|YP_001641313.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1] gi|163664875|gb|ABY32242.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1] Length = 147 Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 72/128 (56%), Positives = 90/128 (70%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGA V + +++ AGNR R L D TAHAEILAIR C L E L DLYVTLE Sbjct: 19 GEVPVGAAVVRDGTVLAVAGNRPRTLSDPTAHAEILAIRAACAALRDERLTGCDLYVTLE 78 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI+ ARIRRLYY AS+PKGGG+E+G + + TCHH+PE+Y G E + ++ Sbjct: 79 PCPMCAGAIAFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFREGEAAGLL 138 Query: 142 QDFFKERR 149 ++FF ERR Sbjct: 139 REFFAERR 146 >gi|240140677|ref|YP_002965157.1| tRNA-specific adenosine deaminase [Methylobacterium extorquens AM1] gi|240010654|gb|ACS41880.1| tRNA-specific adenosine deaminase [Methylobacterium extorquens AM1] Length = 147 Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 72/128 (56%), Positives = 90/128 (70%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGA V + +++ AGNR R L D TAHAEILAIR C L E L DLYVTLE Sbjct: 19 GEVPVGAAVVRDGTVLAVAGNRPRTLCDPTAHAEILAIRAACAALRDERLTGCDLYVTLE 78 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI+ ARIRRLYY AS+PKGGG+E+G + + TCHH+PE+Y G E + ++ Sbjct: 79 PCPMCAGAIAFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFRESEAAGLL 138 Query: 142 QDFFKERR 149 ++FF ERR Sbjct: 139 REFFAERR 146 >gi|254563191|ref|YP_003070286.1| tRNA-specific adenosine deaminase [Methylobacterium extorquens DM4] gi|254270469|emb|CAX26469.1| tRNA-specific adenosine deaminase [Methylobacterium extorquens DM4] Length = 147 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 72/128 (56%), Positives = 90/128 (70%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGA V + +++ AGNR R L D TAHAEILAIR C L E L DLYVTLE Sbjct: 19 GEVPVGAAVVRDGTVLAVAGNRPRTLCDPTAHAEILAIRAACAALRDERLTGCDLYVTLE 78 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI+ ARIRRLYY AS+PKGGG+E+G + + TCHH+PE+Y G E + ++ Sbjct: 79 PCPMCAGAIAFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFREGEAAGLL 138 Query: 142 QDFFKERR 149 ++FF ERR Sbjct: 139 REFFAERR 146 >gi|68172021|ref|ZP_00545314.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Ehrlichia chaffeensis str. Sapulpa] gi|88658306|ref|YP_507267.1| cytidine and deoxycytidylate deaminase family protein [Ehrlichia chaffeensis str. Arkansas] gi|67998558|gb|EAM85318.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Ehrlichia chaffeensis str. Sapulpa] gi|88599763|gb|ABD45232.1| cytidine and deoxycytidylate deaminase family protein [Ehrlichia chaffeensis str. Arkansas] Length = 140 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 79/142 (55%), Positives = 97/142 (68%), Gaps = 4/142 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ +AQ L E+PVGAV V NN++IS A N N D TAHAEILAIR C+ILS Sbjct: 1 MKLAISKAQEDLL--EVPVGAVIVHNNEVISSANNSNIHDIDPTAHAEILAIRNACKILS 58 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 IL + D+YVTLEPC MCA AIS ++IRRLY+GA N K G IENG + + CHH PE Sbjct: 59 THILNQCDIYVTLEPCAMCAQAISFSKIRRLYFGAYNKKYGAIENGARIFQF--CHHVPE 116 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y GI E + ++I DFFK+ R Sbjct: 117 VYGGILEAENTKLITDFFKKLR 138 >gi|86748295|ref|YP_484791.1| CMP/dCMP deaminase, zinc-binding [Rhodopseudomonas palustris HaA2] gi|86571323|gb|ABD05880.1| tRNA-adenosine deaminase [Rhodopseudomonas palustris HaA2] Length = 148 Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 77/143 (53%), Positives = 99/143 (69%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL AQ A E+P+G V V +I+ AGNR +D TAHAE+LAIR R L Sbjct: 6 FMDLALAAAQTAGQAGEVPIGCVIVRAGAVIASAGNRTLTDRDPTAHAELLAIREAARKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L + DLYVTLEPCTMCA AIS ARIRRLY+GA +PKGG +E+G +F+ TCHH+P Sbjct: 66 GSERLVDCDLYVTLEPCTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFFGQPTCHHAP 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EIY G+ E+ + ++++FF+ RR Sbjct: 126 EIYSGVGEREAAALLREFFRARR 148 >gi|39934239|ref|NP_946515.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris CGA009] gi|192289765|ref|YP_001990370.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris TIE-1] gi|39648087|emb|CAE26607.1| possible cytidine and deoxycytidylate deaminase [Rhodopseudomonas palustris CGA009] gi|192283514|gb|ACE99894.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris TIE-1] Length = 148 Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 77/145 (53%), Positives = 101/145 (69%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL EA AA E+P+G V V + +I++AGNR +D TAHAE+LAIR Sbjct: 4 STFMELALAEAAAAAEAGEVPIGCVIVRDGVVIAKAGNRTLTDRDPTAHAELLAIREAAA 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L E L + DLYVTLEPCTMCA AIS ARIRRLY+GA +PKGG +E+G +FY TCHH Sbjct: 64 KLGSERLVDCDLYVTLEPCTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFYGQPTCHH 123 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 +PE+Y + E+ + ++++FFK RR Sbjct: 124 APEVYSAVGEREAATMLREFFKARR 148 >gi|255261482|ref|ZP_05340824.1| tRNA-specific adenosine deaminase [Thalassiobium sp. R2A62] gi|255103817|gb|EET46491.1| tRNA-specific adenosine deaminase [Thalassiobium sp. R2A62] Length = 147 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 75/143 (52%), Positives = 94/143 (65%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+A+ A R E+PVGAV V + K+++ GNR RE D TAHAE+LAIR C Sbjct: 5 FMDQALEQARLAGARGEVPVGAVVVADGKVVAAQGNRTRERNDPTAHAEVLAIREACAAA 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPC MCA IS ARI RLYYGA +PK GGI G + +T + CHH P Sbjct: 65 GSERLVGHDLYVTLEPCPMCATVISNARIARLYYGAGDPKSGGIVQGPRIFTHSQCHHVP 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GI + + ++++ FF R Sbjct: 125 EVYDGIGAEAASEMLRAFFAGLR 147 >gi|312113039|ref|YP_004010635.1| CMP/dCMP deaminase zinc-binding protein [Rhodomicrobium vannielii ATCC 17100] gi|311218168|gb|ADP69536.1| CMP/dCMP deaminase zinc-binding protein [Rhodomicrobium vannielii ATCC 17100] Length = 157 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 77/143 (53%), Positives = 97/143 (67%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA+ AA E PVGAV V + I R N ++D HAE+ AIR C + Sbjct: 1 MQEALIEAERAAALGETPVGAVVVAPDGSIAGRGHNLVISVRDPFGHAEMRAIRQACEAV 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E LP DLYVTLEPCTMCAAAIS ARIRRLY+GA + KGG +ENG +F++ ATCHH+P Sbjct: 61 QSERLPGYDLYVTLEPCTMCAAAISFARIRRLYFGAWDEKGGAVENGVRFFSAATCHHAP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EIY GI++ + +++ FF+ERR Sbjct: 121 EIYGGIAQAEAAALLRAFFQERR 143 >gi|46203751|ref|ZP_00051027.2| COG0590: Cytosine/adenosine deaminases [Magnetospirillum magnetotacticum MS-1] Length = 152 Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 72/128 (56%), Positives = 88/128 (68%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V + ++ AGNR R L D TAHAEILAIR C L E L DLYVTLE Sbjct: 19 GEVPVGAVVVRDGVVLGVAGNRPRALSDPTAHAEILAIRAACTALQDERLTGCDLYVTLE 78 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AIS ARIRRLYY AS+PKGGG+E+G + + TCHH+PE+Y G + ++ Sbjct: 79 PCPMCAGAISFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFRAGEAAGLL 138 Query: 142 QDFFKERR 149 ++FF RR Sbjct: 139 REFFAGRR 146 >gi|217979352|ref|YP_002363499.1| CMP/dCMP deaminase zinc-binding [Methylocella silvestris BL2] gi|217504728|gb|ACK52137.1| CMP/dCMP deaminase zinc-binding [Methylocella silvestris BL2] Length = 146 Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 70/129 (54%), Positives = 90/129 (69%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 R E+PVGAV V + I++RAGNR D TAHAE+L IR R L + L DLYVTL Sbjct: 18 RGEVPVGAVIVRDGAILARAGNRTLADDDPTAHAEMLTIRAAARALGSQRLAGCDLYVTL 77 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCAAAIS AR+RRLY+ A +PKGG +E+G +F+ TCHH+PE+Y G+ +S + Sbjct: 78 EPCAMCAAAISFARVRRLYFAALDPKGGAVEHGPRFFAQPTCHHAPEVYEGLRASQSADL 137 Query: 141 IQDFFKERR 149 ++ FF ERR Sbjct: 138 LRRFFAERR 146 >gi|84686242|ref|ZP_01014137.1| cytidine and deoxycytidylate deaminase family protein [Maritimibacter alkaliphilus HTCC2654] gi|84665769|gb|EAQ12244.1| cytidine and deoxycytidylate deaminase family protein [Rhodobacterales bacterium HTCC2654] Length = 150 Score = 153 bits (386), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 70/130 (53%), Positives = 91/130 (70%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+PVGAV V + I+++AGNR REL D TAHAE L IR C E LP+ DLYVT Sbjct: 21 RGEVPVGAVLVGPDGTIVAQAGNRTRELSDPTAHAETLVIRAACAAAGSERLPDHDLYVT 80 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCAA IS ARIRRLYYGAS+PK GG +G + ++ CHH+P++Y GI+ + Sbjct: 81 LEPCPMCAAVISFARIRRLYYGASDPKSGGTAHGARVFSHPQCHHAPDVYDGIAAAEAET 140 Query: 140 IIQDFFKERR 149 +++ FF ++R Sbjct: 141 LLKTFFGKKR 150 >gi|332185526|ref|ZP_08387274.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Sphingomonas sp. S17] gi|332014504|gb|EGI56561.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Sphingomonas sp. S17] Length = 142 Score = 153 bits (386), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 75/142 (52%), Positives = 93/142 (65%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+ A+ A E+PVGAV V + +++S A N R L D TAHAEI AIR L Sbjct: 1 MRLALDAARRAGEEGEVPVGAVIVRHGQVVSVAANAPRRLHDPTAHAEIQAIRAAAEKLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 +E L E DL+VTLEPC MCA AI+ ARI RLYY AS+PKGG +E+G +F+ TCHH PE Sbjct: 61 RERLEECDLWVTLEPCAMCAGAIAHARIARLYYAASDPKGGAVEHGPRFFGQPTCHHRPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IY GI E +++ FF RR Sbjct: 121 IYAGIGEAEGAALLRSFFAARR 142 >gi|316932708|ref|YP_004107690.1| CMP/dCMP deaminase zinc-binding protein [Rhodopseudomonas palustris DX-1] gi|315600422|gb|ADU42957.1| CMP/dCMP deaminase zinc-binding protein [Rhodopseudomonas palustris DX-1] Length = 148 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 76/145 (52%), Positives = 100/145 (68%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL EA A E+P+G V V + +I++AGNR +D TAHAE+LAIR Sbjct: 4 STFMELALAEAAAAGAAGEVPIGCVIVRDGVVIAKAGNRTLTDRDPTAHAELLAIRQASA 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L E L + DLYVTLEPCTMCA AIS ARIRRLY+GA +PKGG +E+G +FY TCHH Sbjct: 64 KLGSERLVDCDLYVTLEPCTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFYGQPTCHH 123 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 +PE+Y + E+ + ++++FFK RR Sbjct: 124 APEVYSAVGEREAAAMLREFFKARR 148 >gi|87198248|ref|YP_495505.1| tRNA-adenosine deaminase [Novosphingobium aromaticivorans DSM 12444] gi|87133929|gb|ABD24671.1| tRNA-adenosine deaminase [Novosphingobium aromaticivorans DSM 12444] Length = 151 Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 71/142 (50%), Positives = 99/142 (69%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+EA AA E+P+GAV V + K+++ A NR R L+D TAHAE+LAIR L Sbjct: 10 MRLALDEALRAADEGEVPIGAVVVKDGKVVAAAHNRPRTLRDPTAHAEMLAIRAAAAQLG 69 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 QE L DL+V+LEPC MCA AI+ ARI R+YY AS+PKGG +E+G++ + TC H PE Sbjct: 70 QERLEGCDLWVSLEPCAMCAGAIAHARIARVYYAASDPKGGAVEHGSRVFDQPTCLHRPE 129 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G+ E + ++++ FF++RR Sbjct: 130 VYSGMGEAEAAEMLRTFFRDRR 151 >gi|85705168|ref|ZP_01036268.1| hypothetical protein ROS217_04635 [Roseovarius sp. 217] gi|85670490|gb|EAQ25351.1| hypothetical protein ROS217_04635 [Roseovarius sp. 217] Length = 147 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 81/143 (56%), Positives = 102/143 (71%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA+ AALR E+PVGAV V + + ++RAGNR REL D TAHAEILAIR C L Sbjct: 1 METALDEARAAALRGEVPVGAVIVAPSGVLVARAGNRTRELSDPTAHAEILAIRAACAAL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPC MCA+AI+ ARI RLYYGA++PK GG+ G + ++ CHH P Sbjct: 61 GSERLTGHDLYVTLEPCAMCASAIASARIARLYYGAADPKSGGVAMGARVFSHPQCHHVP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EIY GI+ S +++ FF++RR Sbjct: 121 EIYDGIAATESETLLKTFFRDRR 143 >gi|90419974|ref|ZP_01227883.1| cytidine/deoxycytidylate deaminase [Aurantimonas manganoxydans SI85-9A1] gi|90336015|gb|EAS49763.1| cytidine/deoxycytidylate deaminase [Aurantimonas manganoxydans SI85-9A1] Length = 202 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 84/144 (58%), Positives = 107/144 (74%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALEEA+ AA RNE PVGAV V ++II+R GN R+ D TAHAEI+AIR Sbjct: 58 TFMDIALEEARLAAARNETPVGAVIVRGDEIIARGGNETRQRNDPTAHAEIVAIRAAAAR 117 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L E LP+ DLYVTLEPC MCAAAIS ARIRRLYYGA++PKGGG++ G +F++ TCHH+ Sbjct: 118 LGSERLPDCDLYVTLEPCAMCAAAISFARIRRLYYGAADPKGGGVDAGPRFFSQPTCHHA 177 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+Y I+ + S ++++ FF+ RR Sbjct: 178 PEVYSDIAARESAELLRGFFQARR 201 >gi|144897625|emb|CAM74489.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Magnetospirillum gryphiswaldense MSR-1] Length = 146 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 72/129 (55%), Positives = 91/129 (70%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 R E+PVGAV V ++I+ GNR EL D TAHAE+ IR L Q L E DLYVTL Sbjct: 18 RGEVPVGAVLVRAGQVIAADGNRVEELHDPTAHAEMQVIRAAATRLGQTRLEECDLYVTL 77 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCAAAI+ AR+RRLYYGA +PKGGG+E+G + + +TCHH PEI G+ E + + Sbjct: 78 EPCPMCAAAIAHARLRRLYYGAYDPKGGGVEHGARVFERSTCHHRPEIVGGLREAENAAL 137 Query: 141 IQDFFKERR 149 +QDFF++RR Sbjct: 138 LQDFFRQRR 146 >gi|209966841|ref|YP_002299756.1| cytidine and deoxycytidylate deaminase, putative [Rhodospirillum centenum SW] gi|209960307|gb|ACJ00944.1| cytidine and deoxycytidylate deaminase, putative [Rhodospirillum centenum SW] Length = 158 Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 74/132 (56%), Positives = 97/132 (73%), Gaps = 2/132 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL EA+ A R E+PVGAV V +++ AGNR EL D TAHAE+LAIR C + Sbjct: 15 MRQALAEAEAAGQRGEVPVGAVIVDPATGAVVAAAGNRTEELADPTAHAEVLAIRAACAV 74 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L LP +DLYVTLEPC MCAAAIS AR+RR+Y+GA +PKGGG+++G +F+T TCHH+ Sbjct: 75 LGAPRLPGLDLYVTLEPCAMCAAAISFARLRRVYFGAYDPKGGGVDHGPRFFTRTTCHHA 134 Query: 126 PEIYPGISEQRS 137 P++Y GI+E+ + Sbjct: 135 PDVYGGIAEREA 146 >gi|84501544|ref|ZP_00999716.1| hypothetical protein OB2597_15120 [Oceanicola batsensis HTCC2597] gi|84390165|gb|EAQ02724.1| hypothetical protein OB2597_15120 [Oceanicola batsensis HTCC2597] Length = 154 Score = 151 bits (381), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 75/144 (52%), Positives = 97/144 (67%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL+EA+ AA R E+PVGAV V ++++R GNR RE D +AHAE+L IR C Sbjct: 9 FMHLALDEARAAAARGEVPVGAVLVSPGGEVVARDGNRTREKADPSAHAEMLVIRAACAA 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 E LP DLYVTLEPC MCAA I ARI RLYYGA++PK GG+ G + +T CHH Sbjct: 69 AGSERLPGHDLYVTLEPCPMCAAVIGAARIARLYYGAADPKSGGLGQGPRIFTHPQCHHV 128 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+Y GI + + +++ FF++RR Sbjct: 129 PEVYDGIGAREAEDLLKGFFRDRR 152 >gi|88607031|ref|YP_504931.1| cytidine and deoxycytidylate deaminase family protein [Anaplasma phagocytophilum HZ] gi|88598094|gb|ABD43564.1| cytidine and deoxycytidylate deaminase family protein [Anaplasma phagocytophilum HZ] Length = 147 Score = 150 bits (379), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 77/147 (52%), Positives = 100/147 (68%), Gaps = 4/147 (2%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + + +M A+EEA +++ EIPVGA+ V N II++A N + D TAHAEI+AIRM Sbjct: 2 RASAYMKIAMEEANSSS--GEIPVGALVVRNGVIIAKAHNLTIQNTDPTAHAEIVAIRMA 59 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C+ LS IL D+YVTLEPC MC AISLARIRR+Y+GA N K GGIENG Q L C Sbjct: 60 CKALSTHILDGCDIYVTLEPCAMCTQAISLARIRRIYFGACNEKLGGIENGAQ--VLKYC 117 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H PE+Y G EQ + ++++ FFK+ R Sbjct: 118 LHVPEVYGGFLEQENAELLKAFFKKMR 144 >gi|254488088|ref|ZP_05101293.1| tRNA-specific adenosine deaminase [Roseobacter sp. GAI101] gi|214044957|gb|EEB85595.1| tRNA-specific adenosine deaminase [Roseobacter sp. GAI101] Length = 151 Score = 149 bits (377), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 75/144 (52%), Positives = 99/144 (68%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ ALEEA++AA R E+PVGA V ++++R+GNR REL D TAHAE+LAIR C Sbjct: 6 FMNIALEEARDAAERGEVPVGAAVVSPQGQVVARSGNRTRELNDPTAHAEVLAIRAACAA 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 E L LYVTLEPC MCA AIS AR+ LYYGAS+PK GG+ G + ++ CHH Sbjct: 66 AGSERLGGYALYVTLEPCAMCAGAISAARVATLYYGASDPKSGGVAQGARVFSHPQCHHV 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+Y GI+ ++ +++DFF +R Sbjct: 126 PEVYDGIATAQAEVLLKDFFGGKR 149 >gi|254463267|ref|ZP_05076683.1| cytosine deaminase [Rhodobacterales bacterium HTCC2083] gi|206679856|gb|EDZ44343.1| cytosine deaminase [Rhodobacteraceae bacterium HTCC2083] Length = 157 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 74/149 (49%), Positives = 92/149 (61%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + K FM AL EA+ A E+PVGAV V + II R N R D +AHAEILAIR Sbjct: 8 LMKFTSFMEAALVEARLAEAAGEVPVGAVVVKDGAIIGRGRNATRTGCDPSAHAEILAIR 67 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C +L Q+ L + DLYVTLEPC MCA AI+ AR+ RLYYGAS+PK GG+ G + + A Sbjct: 68 EACAVLGQDRLVDCDLYVTLEPCAMCAGAIAHARVARLYYGASDPKSGGVTVGARVFDHA 127 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 HH PE+Y GI S ++ FF +R Sbjct: 128 QSHHRPEVYDGIGADESGALLSAFFARKR 156 >gi|254441373|ref|ZP_05054866.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Octadecabacter antarcticus 307] gi|198251451|gb|EDY75766.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Octadecabacter antarcticus 307] Length = 151 Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 71/130 (54%), Positives = 89/130 (68%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+P+GAV V +I+ AGNR REL D TAHAEILAIR C L QE L D+YVT Sbjct: 20 RGEVPIGAVIVSPTGLVIAAAGNRTRELNDPTAHAEILAIRAACAELGQERLTGHDIYVT 79 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCAAAIS AR+ RLYYGAS+PK GG+ + ++ CHH+PE+Y G+S S Sbjct: 80 LEPCPMCAAAISNARLARLYYGASDPKSGGVAQAPRVFSHPQCHHAPEVYDGLSADTSET 139 Query: 140 IIQDFFKERR 149 +++ FF +R Sbjct: 140 LLKSFFAAKR 149 >gi|170746522|ref|YP_001752782.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM 2831] gi|170653044|gb|ACB22099.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM 2831] Length = 162 Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 72/128 (56%), Positives = 91/128 (71%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGA V + +++ A NR REL D TAHAEILAIR C L E L DLYVTLE Sbjct: 34 GEVPVGAAVVRDGTVLAVAHNRPRELHDPTAHAEILAIRAACATLGTERLVGCDLYVTLE 93 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AIS ARIRRLYYGA++PKGGG+E+G + + TCHH+PE+Y G E+ + ++ Sbjct: 94 PCPMCAGAISFARIRRLYYGAADPKGGGVEHGPRVFDQPTCHHAPEVYGGFREREAAALL 153 Query: 142 QDFFKERR 149 + FF +RR Sbjct: 154 RAFFAQRR 161 >gi|149914091|ref|ZP_01902623.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter sp. AzwK-3b] gi|149812375|gb|EDM72206.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter sp. AzwK-3b] Length = 157 Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 72/129 (55%), Positives = 90/129 (69%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV V +I++RAGNR REL D TAHAEIL IR C + E LP LYVTL Sbjct: 21 GEVPVGAVLVDPKGRIVARAGNRTRELSDPTAHAEILVIREACAAVGSERLPGYALYVTL 80 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA AIS ARI RLYYGAS+PK GG+ +G + ++ CHH PEIY GI+ + + Sbjct: 81 EPCAMCATAISAARIARLYYGASDPKSGGVAHGARVFSHPQCHHVPEIYDGIAAAEAEAL 140 Query: 141 IQDFFKERR 149 ++ FF++RR Sbjct: 141 LKAFFRDRR 149 >gi|58617315|ref|YP_196514.1| hypothetical protein ERGA_CDS_05880 [Ehrlichia ruminantium str. Gardel] gi|58416927|emb|CAI28040.1| Conserved hypothetical protein (putative cytidine deaminase) [Ehrlichia ruminantium str. Gardel] Length = 145 Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 77/143 (53%), Positives = 96/143 (67%), Gaps = 4/143 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ +AQ L E+PVGAV V N K+IS N N + D TAHAEIL+IR C +L Sbjct: 6 YMRLAIGKAQEDCL--EVPVGAVIVYNGKVISCQSNSNIKNCDPTAHAEILSIRHACIVL 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S IL + D+YVTLEPC MCA AIS ARIRRLY+GA N K GGIENG + + CH P Sbjct: 64 STHILNQCDMYVTLEPCAMCAQAISFARIRRLYFGAYNKKYGGIENGARVFHF--CHSVP 121 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GI E+ + +++ DFFK R Sbjct: 122 EVYGGILEEENIRLMTDFFKRLR 144 >gi|307293957|ref|ZP_07573801.1| CMP/dCMP deaminase zinc-binding [Sphingobium chlorophenolicum L-1] gi|306880108|gb|EFN11325.1| CMP/dCMP deaminase zinc-binding [Sphingobium chlorophenolicum L-1] Length = 152 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 71/142 (50%), Positives = 93/142 (65%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+ A++AA E+P+GAV L+ +I+ NRNR D TAHAEI+AIR L Sbjct: 11 MRRALDLARSAAEAGEVPIGAVVTLDGRIVGEGENRNRRDNDPTAHAEIVAIRAAAAHLG 70 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L DL+VTLEPC MCA AIS ARI RLYY A++PKGG IE G +F+T C H PE Sbjct: 71 DFRLNGCDLWVTLEPCAMCAGAISHARIARLYYAAADPKGGAIEQGPRFFTQPQCLHRPE 130 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G+++ + +++DFF RR Sbjct: 131 VYGGLAQAEASMLLRDFFVARR 152 >gi|260425752|ref|ZP_05779732.1| cytidine/deoxycytidylate deaminase family protein [Citreicella sp. SE45] gi|260423692|gb|EEX16942.1| cytidine/deoxycytidylate deaminase family protein [Citreicella sp. SE45] Length = 149 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 64/117 (54%), Positives = 81/117 (69%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 + ++++ AGNR REL D +AHAEILA+R C E LP DLYVTLEPC MCAAAIS Sbjct: 33 DGRVVAAAGNRTRELNDPSAHAEILALRAACADAGSERLPGHDLYVTLEPCPMCAAAISF 92 Query: 93 ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 AR+ RLYYGA++PK GG+ G + Y CHH PE+Y GI+ S +++ FF ERR Sbjct: 93 ARVARLYYGAADPKSGGVAQGARVYAHPQCHHVPEVYDGIAAAESETLLRGFFAERR 149 >gi|73667189|ref|YP_303205.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Ehrlichia canis str. Jake] gi|72394330|gb|AAZ68607.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Ehrlichia canis str. Jake] Length = 139 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 77/142 (54%), Positives = 99/142 (69%), Gaps = 4/142 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ +AQ +E+PVGAV V N+++IS + N N + D TAHAEILAIR C+ILS Sbjct: 1 MKLAISKAQEDL--SEVPVGAVIVYNDEVISSSNNSNIQNTDPTAHAEILAIREACKILS 58 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 +IL + D+YVTLEPC MCA AIS A++RRLY+GA N K G IENG + + CHH PE Sbjct: 59 TQILDQCDIYVTLEPCAMCAQAISFAKLRRLYFGAYNKKYGAIENGARIFQF--CHHVPE 116 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IY GI E + ++I DFFK+ R Sbjct: 117 IYGGILENENIKLITDFFKKLR 138 >gi|103488226|ref|YP_617787.1| CMP/dCMP deaminase, zinc-binding [Sphingopyxis alaskensis RB2256] gi|98978303|gb|ABF54454.1| tRNA-adenosine deaminase [Sphingopyxis alaskensis RB2256] Length = 155 Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 73/142 (51%), Positives = 91/142 (64%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+ A+ AA E+PVGAV V + +I+ NR RE D TAHAEI+A+RM L Sbjct: 10 MRRALDLARIAADWGEVPVGAVIVKDGAVIAEGHNRPRESHDPTAHAEIVAMRMAAAKLG 69 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L DLYVTLEPC MCA AI+ ARI RLYYGA +PKGG + +G + + T HH PE Sbjct: 70 NERLDGCDLYVTLEPCAMCAGAIAHARIARLYYGADDPKGGAVVHGPRLFAQPTVHHRPE 129 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IY GI E + +++ FF RR Sbjct: 130 IYDGIGESEAAGLLRAFFAARR 151 >gi|126739257|ref|ZP_01754951.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter sp. SK209-2-6] gi|126719874|gb|EBA16582.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter sp. SK209-2-6] Length = 154 Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 77/145 (53%), Positives = 109/145 (75%), Gaps = 3/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M+ AL+EA+ AA R E+PVGAV ++N+K +++RAGNR REL D TAHAEIL +R GC+ Sbjct: 11 YMNLALDEARAAARRGEVPVGAV-LINSKGDVVARAGNRTRELNDPTAHAEILVLREGCK 69 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + E L DLYVTLEPC MCAAA++ ARI R+YYGAS+PK GG+ +G ++ HH Sbjct: 70 AIGSERLMGYDLYVTLEPCAMCAAALAAARISRIYYGASDPKSGGVAHGACVFSHPQAHH 129 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 PE+Y GISE+ + ++++ FF+++R Sbjct: 130 VPEVYEGISEREAAELLKVFFEQKR 154 >gi|57239296|ref|YP_180432.1| putative deaminase [Ehrlichia ruminantium str. Welgevonden] gi|58579261|ref|YP_197473.1| hypothetical protein ERWE_CDS_05970 [Ehrlichia ruminantium str. Welgevonden] gi|57161375|emb|CAH58299.1| putative deaminase [Ehrlichia ruminantium str. Welgevonden] gi|58417887|emb|CAI27091.1| Conserved hypothetical protein (putative cytidine deaminase) [Ehrlichia ruminantium str. Welgevonden] Length = 145 Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 74/143 (51%), Positives = 96/143 (67%), Gaps = 4/143 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ +AQ L E+PVGAV V N K+IS N N + D TAHAEIL+IR C +L Sbjct: 6 YMRLAIGKAQEDCL--EVPVGAVIVYNGKVISCQNNSNVKNCDPTAHAEILSIRHACIVL 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S IL + D+YVTLEPC MCA AIS ARIRRLY+GA N K GG+ENG + + CH P Sbjct: 64 STHILNQCDMYVTLEPCAMCAQAISFARIRRLYFGAYNKKYGGVENGARVFHF--CHSVP 121 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GI E+ + +++ +FF+ R Sbjct: 122 EVYGGILEEENIRLMTNFFRRLR 144 >gi|182678875|ref|YP_001833021.1| CMP/dCMP deaminase zinc-binding [Beijerinckia indica subsp. indica ATCC 9039] gi|182634758|gb|ACB95532.1| CMP/dCMP deaminase zinc-binding [Beijerinckia indica subsp. indica ATCC 9039] Length = 151 Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 78/142 (54%), Positives = 98/142 (69%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 S A EEA AA R E+PVGAV + I++RAGN+ KD TAHAE+LAIR C +L Sbjct: 10 FSLAFEEAHKAAARGEVPVGAVIMREGIILARAGNQVLADKDPTAHAEMLAIRQACAVLG 69 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L DLYVTLEPC MCAAAI+ AR+RRLY+ AS+PKGGG+E+G + + TCHH E Sbjct: 70 SERLIGCDLYVTLEPCAMCAAAIAHARLRRLYFSASDPKGGGVEHGARIFAQPTCHHVTE 129 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IY G+ E + +++ FF ERR Sbjct: 130 IYGGLRESEAAALLRAFFLERR 151 >gi|91206241|ref|YP_538596.1| cytosine deaminase [Rickettsia bellii RML369-C] gi|157827858|ref|YP_001496922.1| cytosine deaminase [Rickettsia bellii OSU 85-389] gi|91069785|gb|ABE05507.1| Cytosine deaminase [Rickettsia bellii RML369-C] gi|157803162|gb|ABV79885.1| Cytosine deaminase [Rickettsia bellii OSU 85-389] Length = 152 Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 71/151 (47%), Positives = 100/151 (66%), Gaps = 2/151 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILA 58 M N FM AL++A+ A +NE+PVGAV V N KIIS++ N E + HAEI+A Sbjct: 1 MNFDNFFMREALKQAEIAFSKNEVPVGAVIVDRENQKIISKSYNNTEEKNNALYHAEIIA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I CRI+S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+ +++ Sbjct: 61 INEACRIISSKNLSDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFN 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 C H PEIY GI + S +++ FFK+ R Sbjct: 121 SKACFHRPEIYSGIFAEDSALLMKGFFKKIR 151 >gi|58584428|ref|YP_198001.1| cytosine/adenosine deaminase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418744|gb|AAW70759.1| Cytosine/adenosine deaminase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 143 Score = 143 bits (360), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 72/142 (50%), Positives = 94/142 (66%), Gaps = 5/142 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+E+A+ A +EIP+GAV V + IIS A N + D TAHAE+L IR C +LS Sbjct: 1 MEFAVEQAKLAKKNDEIPIGAVIVSGDNIISFAHNISN---DPTAHAEMLVIRQACELLS 57 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 +L D+YVTLEPC MCA AIS ARI+RLY+GA N KGGGIENG + + C H PE Sbjct: 58 TSVLCNADMYVTLEPCPMCAQAISFARIKRLYFGAYNSKGGGIENGAKIFQF--CSHVPE 115 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G+ E +++DFF++ R Sbjct: 116 VYGGVLETECSFLLKDFFEKLR 137 >gi|56551192|ref|YP_162031.1| CMP/dCMP deaminase zinc-binding protein [Zymomonas mobilis subsp. mobilis ZM4] gi|260753167|ref|YP_003226060.1| CMP/dCMP deaminase zinc-binding [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|9931341|gb|AAG02151.1|AF212041_7 nitrogen fixation protein [Zymomonas mobilis subsp. mobilis ZM4] gi|56542766|gb|AAV88920.1| CMP/dCMP deaminase zinc-binding protein [Zymomonas mobilis subsp. mobilis ZM4] gi|258552530|gb|ACV75476.1| CMP/dCMP deaminase zinc-binding protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 160 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 66/143 (46%), Positives = 95/143 (66%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-LKDVTAHAEILAIRMGCRIL 66 M AL +A++AA + E+PVGAV KII+ AGN + D T HAE+ A+R +L Sbjct: 17 MRQALLQAESAAHQGEVPVGAVVTFKGKIIAVAGNAMQPPFIDPTGHAEVRALRQAASVL 76 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + DL+VTLEPC MCA AI+ ARIRRLYYGA +PKGG + +G + + +CHH P Sbjct: 77 GSSRLDQCDLWVTLEPCAMCAGAIATARIRRLYYGADDPKGGAVLSGVRLFFQPSCHHQP 136 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EIY + +++ ++++ FFK++R Sbjct: 137 EIYNDLGSRKASELLRQFFKQKR 159 >gi|241760863|ref|ZP_04758952.1| CMP/dCMP deaminase zinc-binding [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374482|gb|EER63943.1| CMP/dCMP deaminase zinc-binding [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 160 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 66/143 (46%), Positives = 95/143 (66%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-LKDVTAHAEILAIRMGCRIL 66 M AL +A++AA + E+PVGAV KII+ AGN + D T HAE+ A+R +L Sbjct: 17 MRHALLQAESAAHQGEVPVGAVVTFKGKIIAVAGNAMQPPFIDPTGHAEVRALRQAASVL 76 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + DL+VTLEPC MCA AI+ ARIRRLYYGA +PKGG + +G + + +CHH P Sbjct: 77 GSSRLDQCDLWVTLEPCAMCAGAIATARIRRLYYGADDPKGGAVLSGVRLFFQPSCHHQP 136 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EIY + +++ ++++ FFK++R Sbjct: 137 EIYNDLGSRKASELLRQFFKQKR 159 >gi|157829120|ref|YP_001495362.1| cytosine deaminase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933844|ref|YP_001650633.1| tRNA-specific adenosine deaminase [Rickettsia rickettsii str. Iowa] gi|157801601|gb|ABV76854.1| cytosine deaminase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908931|gb|ABY73227.1| tRNA-specific adenosine deaminase [Rickettsia rickettsii str. Iowa] Length = 168 Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 69/148 (46%), Positives = 98/148 (66%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL++A+ A +NE+PVGAV V LN KII+ N E + HAEI+AI Sbjct: 12 NNFFMEQALKQAKIAFDKNEVPVGAVVVDRLNQKIIASTHNNTEEKNNALYHAEIIAINE 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G IE+ +++ + Sbjct: 72 ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAIESNLRYFNSSA 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C H PEIY GI + S ++++FFK R Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159 >gi|238650838|ref|YP_002916693.1| tRNA-specific adenosine deaminase [Rickettsia peacockii str. Rustic] gi|238624936|gb|ACR47642.1| tRNA-specific adenosine deaminase [Rickettsia peacockii str. Rustic] Length = 168 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 68/148 (45%), Positives = 98/148 (66%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL++A+ A +NE+PVGAV V LN KII+ N E + HAEI+AI Sbjct: 12 NNFFMEQALKQAKIAFDKNEVPVGAVVVDRLNQKIIASTHNNTEEKNNALYHAEIIAINK 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+ +++ + Sbjct: 72 ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSSA 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C H PEIY GI + S ++++FFK R Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159 >gi|294012909|ref|YP_003546369.1| putative deaminase [Sphingobium japonicum UT26S] gi|292676239|dbj|BAI97757.1| putative deaminase [Sphingobium japonicum UT26S] Length = 156 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 70/142 (49%), Positives = 90/142 (63%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALE A+ A E+P+GAV L+ + I NRNR D TAHAE++AIR L Sbjct: 15 MRRALELARAAGEAGEVPIGAVVTLDGRTIGEGENRNRRDNDPTAHAEMVAIRAAAAHLG 74 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L DL+VTLEPC MCA AIS ARI RLYY A++PKGG IE G +F+T C H PE Sbjct: 75 DFRLAGCDLWVTLEPCAMCAGAISHARIARLYYAAADPKGGAIEQGPRFFTQPQCLHRPE 134 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G+++ + +++DFF RR Sbjct: 135 VYGGLAQAEASTLLRDFFLARR 156 >gi|148555238|ref|YP_001262820.1| tRNA-adenosine deaminase [Sphingomonas wittichii RW1] gi|148500428|gb|ABQ68682.1| tRNA-adenosine deaminase [Sphingomonas wittichii RW1] Length = 150 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 67/128 (52%), Positives = 85/128 (66%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++++ A N D TAHAEI AIR L + L + DLYVTLE Sbjct: 23 GEVPVGAVIVRGDEVVAAAANAMCGGTDPTAHAEIEAIRAASARLGAQRLDDCDLYVTLE 82 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI+ AR+RRLYYGA +PKGG + NG +F+T TCHH PE Y GI E + ++ Sbjct: 83 PCAMCAGAIAHARLRRLYYGADDPKGGAVANGPRFFTQPTCHHRPETYGGIGEGEAAALL 142 Query: 142 QDFFKERR 149 +DFF RR Sbjct: 143 RDFFAARR 150 >gi|34581121|ref|ZP_00142601.1| cytosine deaminase [Rickettsia sibirica 246] gi|229587195|ref|YP_002845696.1| Cytosine deaminase [Rickettsia africae ESF-5] gi|28262506|gb|EAA26010.1| cytosine deaminase [Rickettsia sibirica 246] gi|228022245|gb|ACP53953.1| Cytosine deaminase [Rickettsia africae ESF-5] Length = 168 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 68/148 (45%), Positives = 98/148 (66%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL++A+ A +NE+PVGAV V LN KII+ N E + HAEI+AI Sbjct: 12 NNFFMEQALKQAKIAFDKNEVPVGAVVVDRLNQKIIASTHNNTEEKNNALYHAEIIAINE 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+ +++ + Sbjct: 72 ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSSA 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C H PEIY GI + S ++++FFK R Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159 >gi|315500440|ref|YP_004089243.1| cmp/dcmp deaminase zinc-binding protein [Asticcacaulis excentricus CB 48] gi|315418452|gb|ADU15092.1| CMP/dCMP deaminase zinc-binding protein [Asticcacaulis excentricus CB 48] Length = 162 Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 67/147 (45%), Positives = 99/147 (67%), Gaps = 2/147 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 M AL+EA+ AA E+P+GA+ + II+RA N +L D +AHAEILA+R Sbjct: 4 KTLMRLALDEAEKAAQAGEVPIGALIYDPSSKTIIARAKNAPIKLNDPSAHAEILALRAA 63 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +++ L ++ +YVTLEPC MCA A+S ARI R+ YGAS+PKGG +E+G +F+ TC Sbjct: 64 GQVVGNYRLTDLWIYVTLEPCVMCAGALSHARIGRVIYGASDPKGGAVESGPRFFAQPTC 123 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H +PE+ G+ E + Q+++DFF++RR Sbjct: 124 HWAPEVTGGVLEAETGQVLKDFFRQRR 150 >gi|254510248|ref|ZP_05122315.1| cytosine deaminase [Rhodobacteraceae bacterium KLH11] gi|221533959|gb|EEE36947.1| cytosine deaminase [Rhodobacteraceae bacterium KLH11] Length = 144 Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 74/143 (51%), Positives = 101/143 (70%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE+A+ AA R E+PVGAV V + ++++ GNR REL D TAHAEILA+R C + Sbjct: 1 MKLALEQARAAADRGEVPVGAVIVAPDGQVVAADGNRTRELNDPTAHAEILALRAACAQV 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E LP+ DLYVTLEPC MCAAA++ ARIRR+YYGAS+PK GG+ +G + ++ HH P Sbjct: 61 KSERLPDHDLYVTLEPCAMCAAALAAARIRRVYYGASDPKSGGVAHGARVFSHPQTHHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GI+ + +++ FF +R Sbjct: 121 EVYDGIAADEAAALLKQFFAAQR 143 >gi|157804219|ref|YP_001492768.1| cytosine deaminase [Rickettsia canadensis str. McKiel] gi|157785482|gb|ABV73983.1| cytosine deaminase [Rickettsia canadensis str. McKiel] Length = 200 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 69/148 (46%), Positives = 99/148 (66%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL++A+ A +NE+PVGAV V LN KII+ + N E + HAEI+ I Sbjct: 12 NNFFMQQALKQARIAFDKNEVPVGAVIVDRLNQKIIASSYNNTEEKNNALYHAEIITINE 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C I+S + L + D+YVTLEPC MCAAAIS +R++RL+YG S+PK G +E+ +++ + Sbjct: 72 ACNIISCKNLNDYDIYVTLEPCAMCAAAISHSRLKRLFYGVSDPKHGAVESNLRYFNSSA 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C H PEIY GI + S ++++FFK+ R Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKKIR 159 >gi|294678027|ref|YP_003578642.1| tRNA-specific adenosine deaminase [Rhodobacter capsulatus SB 1003] gi|294476847|gb|ADE86235.1| tRNA-specific adenosine deaminase [Rhodobacter capsulatus SB 1003] Length = 149 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 72/130 (55%), Positives = 92/130 (70%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+PVGAV V + ++I+RAGNR REL D TAHAEILAIR C L E L DLYVT Sbjct: 20 RGEVPVGAVIVAPDGRVIARAGNRTRELNDPTAHAEILAIRAACAALGSERLAGHDLYVT 79 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCAAA++ ARI RLYYGA +PK GG+ G + + CHH PE+Y GI+ + + + Sbjct: 80 LEPCPMCAAALANARIARLYYGAGDPKSGGVAQGPRIFAHPQCHHVPEVYDGIAAEPAEK 139 Query: 140 IIQDFFKERR 149 ++++FF RR Sbjct: 140 LLKEFFAARR 149 >gi|149185197|ref|ZP_01863514.1| CMP/dCMP deaminase, zinc-binding protein [Erythrobacter sp. SD-21] gi|148831308|gb|EDL49742.1| CMP/dCMP deaminase, zinc-binding protein [Erythrobacter sp. SD-21] Length = 142 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 65/128 (50%), Positives = 87/128 (67%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV + II+ A N RE D TAHAEILAIR L QE L +L+VTLE Sbjct: 15 GEVPVGAVITRDGAIIAEAHNTPRETCDPTAHAEILAIRRAAEALGQERLTTCELWVTLE 74 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI AR+ ++YYGAS+PKGG +E+G + + C H PE+Y G+ E+R+ +++ Sbjct: 75 PCAMCAGAIVHARLAKVYYGASDPKGGAVEHGARVFEQEQCLHKPEVYAGLGEERAAEML 134 Query: 142 QDFFKERR 149 +DFF+ RR Sbjct: 135 RDFFRGRR 142 >gi|326385790|ref|ZP_08207419.1| tRNA-adenosine deaminase [Novosphingobium nitrogenifigens DSM 19370] gi|326209769|gb|EGD60557.1| tRNA-adenosine deaminase [Novosphingobium nitrogenifigens DSM 19370] Length = 142 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 67/142 (47%), Positives = 94/142 (66%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ EA+NAA +P+GAV + ++I+ A N R+ D TAHAEILAIR + L Sbjct: 1 MRLAMVEARNAAQVGAVPIGAVVMRGGEVIATAHNGPRDCHDPTAHAEILAIRAAAKALG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L + DL+VTLEPC MCA AI+ ARI R+YY A +PKGG +E+G + + +T H PE Sbjct: 61 ADRLDDCDLWVTLEPCAMCAGAIAHARIARVYYAAPDPKGGAVEHGPRLFEQSTVLHRPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IY G+ E S +++++FF RR Sbjct: 121 IYSGLGELESARLLREFFAARR 142 >gi|67459711|ref|YP_247335.1| cytosine deaminase [Rickettsia felis URRWXCal2] gi|67005244|gb|AAY62170.1| Cytosine deaminase [Rickettsia felis URRWXCal2] Length = 159 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 68/148 (45%), Positives = 98/148 (66%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL++A A +NE+PVGAV V LN KII + N E + HAEI+AI Sbjct: 12 NNFFMEQALKQAGIAFDKNEVPVGAVIVDRLNQKIIVSSHNNTEEKNNALYHAEIIAINE 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+ +++ + Sbjct: 72 ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSSV 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C + PEIY GI + SR ++++FFK R Sbjct: 132 CFYRPEIYSGILAEDSRLLMKEFFKRIR 159 >gi|292572491|gb|ADE30406.1| Cytosine deaminase [Rickettsia prowazekii Rp22] Length = 163 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 68/148 (45%), Positives = 99/148 (66%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL++A+ A +NE+PVG V V LN KII + N E K+ HAEI+AI Sbjct: 12 NNFFMEQALKQARLAFDKNEVPVGVVIVCRLNQKIIVSSHNNIEEKKNPLCHAEIIAINT 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C ++S + L + D+YVTLEPC MCA+AIS +R++RL+YGAS+ K G +E+ +++ + Sbjct: 72 ACNLISSKNLNDYDIYVTLEPCAMCASAISHSRLKRLFYGASDSKHGAVESNLRYFNSNS 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C + PEIY GI + SR ++Q+FF+ R Sbjct: 132 CFYRPEIYSGILSEHSRFLMQEFFQRIR 159 >gi|58698581|ref|ZP_00373480.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58534906|gb|EAL59006.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia endosymbiont of Drosophila ananassae] Length = 148 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 72/143 (50%), Positives = 95/143 (66%), Gaps = 8/143 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+E+A+ A +E+P+GAV V + IIS A N + D TAHAE+LAIR + Sbjct: 13 YMELAIEQAKLAQKNDEVPIGAVIVSGDNIISSAHNIS---SDPTAHAEMLAIR---QAF 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S L + D+YVTLEPC MCA AIS ARI+RLY+GA NPKGGGIENG + + C H P Sbjct: 67 STSTLCDTDMYVTLEPCPMCAQAISFARIKRLYFGAYNPKGGGIENGAKIFQF--CSHIP 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GI E +++DFF++ R Sbjct: 125 EVYGGILETECSFLLKDFFEKLR 147 >gi|190571610|ref|YP_001975968.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357882|emb|CAQ55341.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 141 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 71/143 (49%), Positives = 97/143 (67%), Gaps = 8/143 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ A+E+A+ A E+P+GAV V N IIS A N + D TAHAE+L IR + Sbjct: 6 YMALAIEQAKLAQKDGEVPIGAVIVNGNNIISSAHNISN---DPTAHAEMLTIR---QAF 59 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S L E ++YVTLEPC MCA AIS A+I+RLY+GA NPKGGG+ENGT+ + C+H P Sbjct: 60 STSTLYEAEMYVTLEPCPMCAQAISFAKIKRLYFGAYNPKGGGVENGTRIFQF--CNHIP 117 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GI E + +++DFF++ R Sbjct: 118 EVYGGILETKCSLLLKDFFEKLR 140 >gi|157964979|ref|YP_001499803.1| cytosine deaminase [Rickettsia massiliae MTU5] gi|157844755|gb|ABV85256.1| Cytosine deaminase [Rickettsia massiliae MTU5] Length = 190 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 67/148 (45%), Positives = 97/148 (65%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL++A+ A +NE+PVGAV V LN KII+ N + HAEI+AI Sbjct: 14 NNFFMEQALKQAKIAFDKNEVPVGAVIVDRLNQKIIASTHNNTEAKNNALYHAEIIAINE 73 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+ +++ + Sbjct: 74 ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSSA 133 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C H PEIY GI + S ++++FFK R Sbjct: 134 CFHRPEIYSGILAEDSGLLMKEFFKRIR 161 >gi|254474984|ref|ZP_05088370.1| cytosine deaminase [Ruegeria sp. R11] gi|214029227|gb|EEB70062.1| cytosine deaminase [Ruegeria sp. R11] Length = 152 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 74/143 (51%), Positives = 99/143 (69%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA+ AA R E+PVGA + + ++++AGNR REL D TAHAE+L IR C + Sbjct: 7 MDVALSEARAAAERGEVPVGAALIAPDGTVVAQAGNRTRELSDPTAHAEVLVIREACAAI 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPC MCAAAI+ ARIRR+YYGAS+PK GG+ +G ++ HH+P Sbjct: 67 GSERLNGYDLYVTLEPCAMCAAAIAAARIRRVYYGASDPKSGGVAHGACVFSHPQAHHAP 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GIS + ++++DFF +R Sbjct: 127 EVYEGISAAPAERLLRDFFAAKR 149 >gi|260432946|ref|ZP_05786917.1| tRNA-specific adenosine deaminase [Silicibacter lacuscaerulensis ITI-1157] gi|260416774|gb|EEX10033.1| tRNA-specific adenosine deaminase [Silicibacter lacuscaerulensis ITI-1157] Length = 156 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 75/143 (52%), Positives = 100/143 (69%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE+A+ A R E+PVGAV V + +II+ GNR REL D TAHAEILA+R CR + Sbjct: 7 MDKALEQARAAGDRGEVPVGAVIVSPDGRIIAADGNRTRELHDPTAHAEILALRAACRAV 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPC MCAAA++ ARIRR+YYGA++PK GG+ +G + ++ HH P Sbjct: 67 GSERLTGHDLYVTLEPCAMCAAALAAARIRRIYYGAADPKSGGVAHGARVFSHPQAHHRP 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GI+ + +++DFF +R Sbjct: 127 EVYDGIAAEDCAWLLRDFFAAQR 149 >gi|225630106|ref|YP_002726897.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia sp. wRi] gi|225592087|gb|ACN95106.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia sp. wRi] Length = 135 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 72/142 (50%), Positives = 94/142 (66%), Gaps = 8/142 (5%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+E+A+ A +E+P+GAV V + IIS A N + D TAHAE+LAIR + S Sbjct: 1 MELAIEQAKLAQKNDEVPIGAVIVSGDNIISSAHNIS---SDPTAHAEMLAIR---QAFS 54 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + D+YVTLEPC MCA AIS ARI+RLY+GA NPKGGGIENG + + C H PE Sbjct: 55 TSTLCDTDMYVTLEPCPMCAQAISFARIKRLYFGAYNPKGGGIENGAKIFQF--CSHIPE 112 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y GI E +++DFF++ R Sbjct: 113 VYGGILETECSFLLKDFFEKLR 134 >gi|15893208|ref|NP_360922.1| cytosine deaminase [Rickettsia conorii str. Malish 7] gi|15620423|gb|AAL03823.1| cytosine deaminase [Rickettsia conorii str. Malish 7] Length = 168 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 67/148 (45%), Positives = 98/148 (66%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL++A+ A +NE+PVGAV V L+ KII+ N E + HAEI+AI Sbjct: 12 NNFFMEQALKQAKIAFDKNEVPVGAVVVDRLHQKIIASTHNNTEEKNNALYHAEIIAINE 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+ +++ + Sbjct: 72 ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGVVESNLRYFNSSA 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C H PEIY GI + S ++++FFK R Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159 >gi|213019012|ref|ZP_03334819.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995121|gb|EEB55762.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 135 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 71/142 (50%), Positives = 96/142 (67%), Gaps = 8/142 (5%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M+ A+E+A+ A E+P+GAV V N IIS A N + D TAHAE+L IR + S Sbjct: 1 MALAIEQAKLAQKDGEVPIGAVIVNGNNIISSAHNISN---DPTAHAEMLTIR---QAFS 54 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L E ++YVTLEPC MCA AIS A+I+RLY+GA NPKGGG+ENGT+ + C+H PE Sbjct: 55 TSTLYEAEMYVTLEPCPMCAQAISFAKIKRLYFGAYNPKGGGVENGTRIFQF--CNHIPE 112 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y GI E + +++DFF++ R Sbjct: 113 VYGGILETKCSLLLKDFFEKLR 134 >gi|94498766|ref|ZP_01305314.1| CMP/dCMP deaminase, zinc-binding protein [Sphingomonas sp. SKA58] gi|94421775|gb|EAT06828.1| CMP/dCMP deaminase, zinc-binding protein [Sphingomonas sp. SKA58] Length = 152 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 70/142 (49%), Positives = 89/142 (62%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALE A+ A NE+P+GAV + II NRNR D TAHAE++A+R L Sbjct: 11 MRRALELARAAQAANEVPIGAVVTRDGVIIGEGENRNRRDCDPTAHAEMVAMRAAAVRLH 70 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L DL+VTLEPC MCA AIS ARI RLYYGA++PKGG IE G + + C H PE Sbjct: 71 DFRLTGCDLWVTLEPCPMCAGAISHARIARLYYGAADPKGGAIEQGPRLFMQPQCLHRPE 130 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G++E + +++DFF RR Sbjct: 131 VYAGLAEAEASALLRDFFAARR 152 >gi|152112361|sp|Q1RGK7|Y1426_RICBR RecName: Full=Uncharacterized deaminase RBE_1426 Length = 145 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 68/144 (47%), Positives = 97/144 (67%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL++A+ A +NE+PVGAV V N KIIS++ N E + HAEI+AI CRI Sbjct: 1 MREALKQAEIAFSKNEVPVGAVIVDRENQKIISKSYNNTEEKNNALYHAEIIAINEACRI 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 +S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+ +++ C H Sbjct: 61 ISSKNLSDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSKACFHR 120 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PEIY GI + S +++ FFK+ R Sbjct: 121 PEIYSGIFAEDSALLMKGFFKKIR 144 >gi|85709873|ref|ZP_01040938.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Erythrobacter sp. NAP1] gi|85688583|gb|EAQ28587.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Erythrobacter sp. NAP1] Length = 149 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 70/143 (48%), Positives = 94/143 (65%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FMS AL A+ A+ E+P+GAV V + KII+ N R+ D TAHAEI+AIR L Sbjct: 7 FMSSALSLARAASELGEVPIGAVVVKDGKIIAEGHNETRDQNDPTAHAEIVAIRRAAAAL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L DL+VTLEPC MCA AI+ ARI RLYY AS+PKGG +E+G + + C H P Sbjct: 67 GDDRLTGCDLWVTLEPCAMCAGAIAHARIARLYYAASDPKGGAVEHGARVFEQEQCLHRP 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y G+ E+ + +++ FF+ERR Sbjct: 127 EVYSGLGEEEAADMLRGFFRERR 149 >gi|157826299|ref|YP_001494019.1| cytosine deaminase [Rickettsia akari str. Hartford] gi|157800257|gb|ABV75511.1| cytosine deaminase [Rickettsia akari str. Hartford] Length = 159 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 67/151 (44%), Positives = 99/151 (65%), Gaps = 2/151 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILA 58 M N FM AL++A+ A +NE+PVGAV V LN KI+ + N E + HAEI+A Sbjct: 9 MSFNNFFMEQALKQARLAFDKNEVPVGAVMVERLNQKIVINSHNNTEEKNNALYHAEIIA 68 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+ +++ Sbjct: 69 INEVCNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFN 128 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + C H PEIY GI + S ++++FF+ R Sbjct: 129 SSACFHRPEIYSGILAEDSGLLMKEFFRRIR 159 >gi|42520340|ref|NP_966255.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410078|gb|AAS14189.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 135 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 72/142 (50%), Positives = 94/142 (66%), Gaps = 8/142 (5%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+E+A+ A +E+P+GAV V + IIS A N + D TAHAE+LAIR + S Sbjct: 1 MELAIEQAKLAQKNDEVPIGAVIVSGDNIISSAHNIS---SDPTAHAEMLAIR---QAFS 54 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + D+YVTLEPC MCA AIS ARI+RLY+GA NPKGGGIENG + + C H PE Sbjct: 55 TPTLCDADMYVTLEPCPMCAQAISFARIKRLYFGAYNPKGGGIENGAKIFQF--CSHIPE 112 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y GI E +++DFF++ R Sbjct: 113 VYGGILEIECSFLLKDFFEKLR 134 >gi|254454396|ref|ZP_05067833.1| cytosine deaminase [Octadecabacter antarcticus 238] gi|198268802|gb|EDY93072.1| cytosine deaminase [Octadecabacter antarcticus 238] Length = 145 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 70/130 (53%), Positives = 90/130 (69%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+PVGAV + +I+ AGNR REL D TAHAEILAIR C L QE L D+YVT Sbjct: 14 RGEVPVGAVVIGPTGLVIATAGNRTRELNDPTAHAEILAIRAACAALGQERLTGHDIYVT 73 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCAAAI+ AR+ RLYYGAS+PK GG+ + ++ CHH+PE+Y G+S + S Sbjct: 74 LEPCPMCAAAIANARLARLYYGASDPKSGGVAQPPRVFSHPQCHHTPEVYDGLSAETSET 133 Query: 140 IIQDFFKERR 149 +++ FF +R Sbjct: 134 LLKSFFAAKR 143 >gi|114765383|ref|ZP_01444498.1| cytidine and deoxycytidylate deaminase family protein [Pelagibaca bermudensis HTCC2601] gi|114542226|gb|EAU45256.1| cytidine and deoxycytidylate deaminase family protein [Roseovarius sp. HTCC2601] Length = 145 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/117 (58%), Positives = 84/117 (71%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 + +++ AGNR REL D TAHAEILA+R CR E LP DLYVTLEPC MCAAAIS Sbjct: 27 SGAVVACAGNRTRELDDPTAHAEILALRAACRAAGSERLPGHDLYVTLEPCPMCAAAISF 86 Query: 93 ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 ARI RLYYGA++PK GG+++G + Y A CHH PE+Y GIS S +++ FF ERR Sbjct: 87 ARIARLYYGAADPKSGGVDHGARVYAHAQCHHVPEVYDGISAAPSEALLKRFFAERR 143 >gi|51473999|ref|YP_067756.1| cytosine aminohydrolase [Rickettsia typhi str. Wilmington] gi|81610850|sp|Q68Y02|Y819_RICTY RecName: Full=Uncharacterized deaminase RT0819 gi|51460311|gb|AAU04274.1| Cytosine aminohydrolase [Rickettsia typhi str. Wilmington] Length = 148 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/144 (45%), Positives = 97/144 (67%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL++A+ A +NE+PVG V V LN KII + N E + HAEI+AI C + Sbjct: 1 MEQALKQARLAFDKNEVPVGVVIVYRLNQKIIVSSHNNIEEKNNALCHAEIIAINEACNL 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 +S + L + D+YVTLEPC MCA+AIS +R++RL+YGAS+ K G +E+ +++ + C H Sbjct: 61 ISSKNLNDYDIYVTLEPCAMCASAISHSRLKRLFYGASDSKQGAVESNLRYFNSSACFHR 120 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PEIY GI + SR ++++FF++ R Sbjct: 121 PEIYSGILSEHSRFLMKEFFQKMR 144 >gi|260574584|ref|ZP_05842587.1| CMP/dCMP deaminase zinc-binding [Rhodobacter sp. SW2] gi|259023001|gb|EEW26294.1| CMP/dCMP deaminase zinc-binding [Rhodobacter sp. SW2] Length = 161 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 75/132 (56%), Positives = 93/132 (70%), Gaps = 1/132 (0%) Query: 19 ALRNEIPVGAVAVLNNKIISR-AGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLY 77 LR E+PVGAV V + ++ AGNR REL D TAHAE+LAIR C E L DLY Sbjct: 29 GLRGEVPVGAVVVSPSGVVVAVAGNRVRELCDPTAHAEVLAIRAACAAAGSERLVGHDLY 88 Query: 78 VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 VTLEPC MCAAAISLARI RLYYGA++PK GG+ GT+ ++ CHH PEIY GI +++ Sbjct: 89 VTLEPCPMCAAAISLARIGRLYYGAADPKSGGVAQGTRVFSHPQCHHVPEIYDGIGAEQA 148 Query: 138 RQIIQDFFKERR 149 +++DFF +RR Sbjct: 149 ADLLRDFFADRR 160 >gi|218506804|ref|ZP_03504682.1| cytosine deaminase protein [Rhizobium etli Brasil 5] Length = 98 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 59/95 (62%), Positives = 73/95 (76%) Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 EI AIR+ C L QE L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG Sbjct: 1 EIAAIRLACEALGQERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGV 60 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +FY TCHH PE+Y G++E +S +I++ FF ++R Sbjct: 61 RFYAQPTCHHVPEVYSGLNEVQSAEILRTFFSQKR 95 >gi|15604662|ref|NP_221180.1| hypothetical protein RP831 [Rickettsia prowazekii str. Madrid E] gi|6226400|sp|Q9ZCC6|Y831_RICPR RecName: Full=Uncharacterized deaminase RP831 gi|3861357|emb|CAA15256.1| unknown [Rickettsia prowazekii] Length = 148 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 66/144 (45%), Positives = 97/144 (67%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL++A+ A +NE+PVG V V LN KII + N E K+ HAEI+AI C + Sbjct: 1 MEQALKQARLAFDKNEVPVGVVIVCRLNQKIIVSSHNNIEEKKNPLCHAEIIAINTACNL 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 +S + L + D+YVTLEPC MCA+AIS +R++RL+YGAS+ K G +E+ +++ +C + Sbjct: 61 ISSKNLNDYDIYVTLEPCAMCASAISHSRLKRLFYGASDSKHGAVESNLRYFNSNSCFYR 120 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PEIY GI + SR ++Q+FF+ R Sbjct: 121 PEIYSGILSEHSRFLMQEFFQRIR 144 >gi|152112359|sp|Q4UJW9|Y1319_RICFE RecName: Full=Uncharacterized deaminase RF_1319 Length = 144 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 66/144 (45%), Positives = 96/144 (66%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL++A A +NE+PVGAV V LN KII + N E + HAEI+AI C + Sbjct: 1 MEQALKQAGIAFDKNEVPVGAVIVDRLNQKIIVSSHNNTEEKNNALYHAEIIAINEACNL 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 +S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+ +++ + C + Sbjct: 61 ISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSSVCFYR 120 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PEIY GI + SR ++++FFK R Sbjct: 121 PEIYSGILAEDSRLLMKEFFKRIR 144 >gi|294795071|ref|ZP_06760206.1| LOW QUALITY PROTEIN: cytidine/deoxycytidylate deaminase family protein [Veillonella sp. 3_1_44] gi|294454433|gb|EFG22807.1| LOW QUALITY PROTEIN: cytidine/deoxycytidylate deaminase family protein [Veillonella sp. 3_1_44] Length = 164 Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 70/143 (48%), Positives = 87/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA A EIP+GA+ V NN IISR NR D TAHAE+L IR C +L Sbjct: 22 FMGFALEEAHKAYALGEIPIGAILVQNNTIISRHHNRRELDHDATAHAEVLVIREACDVL 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVT+EPC MCA AI +RI R+ YGAS+ KGG +E+ + +H P Sbjct: 82 KRWRLTGCTLYVTIEPCPMCAGAIINSRIDRVVYGASDYKGGAVESLFNVLSHPGLNHEP 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ QI++DFFKERR Sbjct: 142 ELASGVLGDECSQIMKDFFKERR 164 >gi|269797481|ref|YP_003311381.1| CMP/dCMP deaminase zinc-binding protein [Veillonella parvula DSM 2008] gi|269094110|gb|ACZ24101.1| CMP/dCMP deaminase zinc-binding protein [Veillonella parvula DSM 2008] Length = 169 Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 70/147 (47%), Positives = 88/147 (59%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM ALEEA A EIP+GA+ V NN IISR NR D TAHAE+L IR Sbjct: 6 RDEYFMGFALEEAHKAYALGEIPIGAILVQNNTIISRHHNRRELDHDATAHAEVLVIREA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C +L + L LYVT+EPC MCA AI +RI R+ YGAS+ KGG +E+ + Sbjct: 66 CDVLKRWRLTGCTLYVTIEPCPMCAGAIINSRIDRVVYGASDYKGGAVESLFNVLSHPGL 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ QI++DFFKERR Sbjct: 126 NHEPELASGVLGDECSQIMKDFFKERR 152 >gi|126727514|ref|ZP_01743348.1| cytidine and deoxycytidylate deaminase family protein [Rhodobacterales bacterium HTCC2150] gi|126703294|gb|EBA02393.1| cytidine and deoxycytidylate deaminase family protein [Rhodobacterales bacterium HTCC2150] Length = 143 Score = 133 bits (334), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 74/143 (51%), Positives = 96/143 (67%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA+ A R E+PVGAV + + ++I++AGN R D AHAEILAIR C L Sbjct: 1 MDIALDEARAAGQRGEVPVGAVILSRDGQVIAQAGNETRAQNDPIAHAEILAIRAACSAL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 +E L DLYVTLEPC MCAAAI+ ARI R+YYGAS+PK GG+ G + + A HH P Sbjct: 61 GRERLQGFDLYVTLEPCAMCAAAIAAARIGRVYYGASDPKSGGVAQGARVFDHAQSHHKP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GIS + +++DFF +R Sbjct: 121 EVYDGISAKECENLLKDFFAAKR 143 >gi|282849118|ref|ZP_06258503.1| cytidine and deoxycytidylate deaminase zinc-binding region [Veillonella parvula ATCC 17745] gi|282580822|gb|EFB86220.1| cytidine and deoxycytidylate deaminase zinc-binding region [Veillonella parvula ATCC 17745] Length = 181 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 70/143 (48%), Positives = 87/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA A EIP+GA+ V NN IISR NR D TAHAE+L IR C +L Sbjct: 22 FMGFALEEAHKAYALGEIPIGAILVQNNTIISRHHNRRELDHDATAHAEVLVIREACDVL 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVT+EPC MCA AI +RI R+ YGAS+ KGG +E+ + +H P Sbjct: 82 KRWRLTGCTLYVTIEPCPMCAGAIINSRIDRVVYGASDYKGGAVESLFNVLSHPGLNHEP 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ QI++DFFKERR Sbjct: 142 ELASGVLGDECSQIMKDFFKERR 164 >gi|294792948|ref|ZP_06758094.1| LOW QUALITY PROTEIN: cytidine/deoxycytidylate deaminase family protein [Veillonella sp. 6_1_27] gi|294455893|gb|EFG24257.1| LOW QUALITY PROTEIN: cytidine/deoxycytidylate deaminase family protein [Veillonella sp. 6_1_27] Length = 164 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 70/143 (48%), Positives = 88/143 (61%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ ALEEA A EIP+GA+ V NN IISR NR D TAHAE+L IR C +L Sbjct: 22 FMAFALEEAHKAYDLGEIPIGAILVQNNTIISRHHNRRELDHDATAHAEVLVIREACGVL 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVT+EPC MCA AI +RI R+ YGAS+ KGG +E+ + +H P Sbjct: 82 KRWRLTGCTLYVTIEPCPMCAGAIINSRIDRVVYGASDYKGGAVESLFNVLSHPGLNHEP 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ QI++DFFKERR Sbjct: 142 ELASGVLGDECSQIMKDFFKERR 164 >gi|152112358|sp|Q92G39|Y1285_RICCN RecName: Full=Uncharacterized deaminase RC1285 Length = 153 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 65/144 (45%), Positives = 96/144 (66%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL++A+ A +NE+PVGAV V L+ KII+ N E + HAEI+AI C + Sbjct: 1 MEQALKQAKIAFDKNEVPVGAVVVDRLHQKIIASTHNNTEEKNNALYHAEIIAINEACNL 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 +S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+ +++ + C H Sbjct: 61 ISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGVVESNLRYFNSSACFHR 120 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PEIY GI + S ++++FFK R Sbjct: 121 PEIYSGILAEDSGLLMKEFFKRIR 144 >gi|239948393|ref|ZP_04700146.1| cytosine/adenosine deaminase [Rickettsia endosymbiont of Ixodes scapularis] gi|239922669|gb|EER22693.1| cytosine/adenosine deaminase [Rickettsia endosymbiont of Ixodes scapularis] Length = 159 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 65/148 (43%), Positives = 95/148 (64%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL++A+ A +NE+PVGAV V LN KII+ N E + HAEI+AI Sbjct: 12 NNFFMEQALKQARIAFDKNEVPVGAVIVDRLNQKIIASTHNNTEEKNNALCHAEIIAINE 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C ++ + L + D+YVTLE C MCAAAI+ +R++RL+YGA + K G +E+ +++ + Sbjct: 72 ACNLIYSKNLNDYDIYVTLESCAMCAAAIAHSRLKRLFYGAFDSKHGAVESNLRYFNSSA 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C H PEIY GI + S ++++FFK R Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159 >gi|241563436|ref|XP_002401703.1| conserved hypothetical protein [Ixodes scapularis] gi|215501895|gb|EEC11389.1| conserved hypothetical protein [Ixodes scapularis] Length = 159 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 65/148 (43%), Positives = 95/148 (64%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL++A+ A +NE+PVGAV V LN KII+ N E + HAEI+AI Sbjct: 12 NNFFMEQALKQARIAFDKNEVPVGAVIVDRLNQKIIASTHNNTEEKNNALCHAEIIAINE 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C ++ + L + D+YVTLE C MCAAAI+ +R++RL+YGA + K G +E+ +++ + Sbjct: 72 ACNLIYSKNLNDYDIYVTLESCAMCAAAIAHSRLKRLFYGAFDSKHGAVESNLRYFNSSA 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C H PEIY GI + S ++++FFK R Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159 >gi|296282925|ref|ZP_06860923.1| tRNA-adenosine deaminase [Citromicrobium bathyomarinum JL354] Length = 152 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/128 (50%), Positives = 90/128 (70%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV + + ++I++A N R L D TAHAE+LA+R + L QE L DL+VTLE Sbjct: 24 GEVPVGAVVMRHGEVIAQAHNAPRTLADPTAHAEVLALRAAAKALGQERLEGCDLWVTLE 83 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI+ ARI RLYYGA++PKGG + +G + + CHH PE+Y G+ E+ + +++ Sbjct: 84 PCAMCAGAIAHARIGRLYYGAADPKGGAVAHGARVFDHPQCHHRPEVYSGMGEEEAAKML 143 Query: 142 QDFFKERR 149 + FF ERR Sbjct: 144 RGFFNERR 151 >gi|323135792|ref|ZP_08070875.1| CMP/dCMP deaminase, zinc-binding [Methylocystis sp. ATCC 49242] gi|322398883|gb|EFY01402.1| CMP/dCMP deaminase, zinc-binding [Methylocystis sp. ATCC 49242] Length = 148 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 57/108 (52%), Positives = 77/108 (71%) Query: 42 NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 NR +D TAHAE+L IR + E L + DLYVTLEPC MCA AIS ARIRRLY+ Sbjct: 41 NRTLRDRDPTAHAEMLVIRQAAAAIGSERLVDCDLYVTLEPCAMCAGAISFARIRRLYFA 100 Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A +PKGG +++G +F++ TCHH+P++Y GI E + Q+++DFF+ RR Sbjct: 101 AEDPKGGAVDHGPRFFSQPTCHHAPDVYGGIRESEAAQLLRDFFRARR 148 >gi|85375364|ref|YP_459426.1| nitrogen fixation protein [Erythrobacter litoralis HTCC2594] gi|84788447|gb|ABC64629.1| nitrogen fixation protein [Erythrobacter litoralis HTCC2594] Length = 142 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 74/142 (52%), Positives = 94/142 (66%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA+ AA E+P+GAV V K+I A N R D TAHAEI AIR + L Sbjct: 1 MRLALEEARKAADAGEVPIGAVVVKGEKVIVAAHNSPRTDHDPTAHAEIAAIRAAAKALG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 QE L DL+VTLEPC MCA AIS ARI RLYY AS+PKGG +E+G + + + C H+PE Sbjct: 61 QERLEGCDLWVTLEPCAMCAGAISHARIARLYYAASDPKGGAVEHGAKVFDHSQCLHAPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G+ E + +++ FF+ERR Sbjct: 121 VYSGMGEDEAADMLRGFFRERR 142 >gi|163737476|ref|ZP_02144893.1| CMP/dCMP deaminase, zinc-binding protein [Phaeobacter gallaeciensis BS107] gi|161389002|gb|EDQ13354.1| CMP/dCMP deaminase, zinc-binding protein [Phaeobacter gallaeciensis BS107] Length = 147 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/143 (53%), Positives = 99/143 (69%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA+ AA R E+PVGAV + + +I +RAGNR REL D TAHAE+L IR C + Sbjct: 1 MDIALTEARAAAARGEVPVGAVLIAPDGQIAARAGNRTRELSDPTAHAEVLVIREACAVA 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPC MCAAAI+ ARIRR+YYGAS+PK GG+ +G ++ HH+P Sbjct: 61 GSERLNGHDLYVTLEPCAMCAAAIAAARIRRVYYGASDPKSGGVAHGACVFSHPQAHHAP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GIS + + +++ FF RR Sbjct: 121 EVYEGISAEPAETLLKAFFAARR 143 >gi|317503805|ref|ZP_07961817.1| cytosine deaminase [Prevotella salivae DSM 15606] gi|315665102|gb|EFV04757.1| cytosine deaminase [Prevotella salivae DSM 15606] Length = 148 Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 71/147 (48%), Positives = 89/147 (60%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K FM AL EAQ AA EIP+GAV V N++IISRA N +L DVTAHAE+ AI Sbjct: 7 KDEQFMRKALYEAQRAAEEGEIPIGAVIVCNDRIISRAHNLTEKLHDVTAHAEMQAITAA 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L + L + LYVT+EPC MCA AI A+I R+ YGAS+ K G QFY Sbjct: 67 ADLLGGKYLSDCTLYVTVEPCVMCAGAIGWAQIGRIVYGASDEK-----RGYQFYAPRAL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E RQ++QDFFK++R Sbjct: 122 HPKAVVTRGVLEAECRQMMQDFFKQKR 148 >gi|309775004|ref|ZP_07670019.1| cytidine/deoxycytidylate deaminase family protein [Erysipelotrichaceae bacterium 3_1_53] gi|308917222|gb|EFP62947.1| cytidine/deoxycytidylate deaminase family protein [Erysipelotrichaceae bacterium 3_1_53] Length = 162 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 92/143 (64%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A++EA A +++E+P+G V V ++KII+R N + HAEI+AI+ C+ + Sbjct: 16 YMRAAIKEAVKANMKDEVPIGCVIVKDDKIIARGHNLRESKQQSINHAEIIAIQKACKKI 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + DLYVTLEPC MCA AI +RIR + YGAS+PKGG I++ Y +H P Sbjct: 76 GSWRLEDCDLYVTLEPCCMCAGAILQSRIRTVIYGASDPKGGSIDSTMHMYEQPGFNHYP 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +Y G+ ++ Q++++FFKE+R Sbjct: 136 CVYSGVLQEECSQLLKNFFKEKR 158 >gi|126732068|ref|ZP_01747870.1| cytidine and deoxycytidylate deaminase family protein [Sagittula stellata E-37] gi|126707357|gb|EBA06421.1| cytidine and deoxycytidylate deaminase family protein [Sagittula stellata E-37] Length = 149 Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 61/117 (52%), Positives = 82/117 (70%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 + +++RAGNR REL D TAHAE+LA+R C + LP DLYVTLEPC MCAAAIS Sbjct: 33 SGAVVARAGNRTRELSDPTAHAEMLALRAACAAAGSDRLPGHDLYVTLEPCPMCAAAISF 92 Query: 93 ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 AR+ R+YYGA++PK GG+ G + ++ CHH PE+Y GI + + ++ FF+ERR Sbjct: 93 ARVARVYYGAADPKSGGVAQGPRVFSHPQCHHVPEVYDGIGAEAASALLTGFFRERR 149 >gi|99081767|ref|YP_613921.1| CMP/dCMP deaminase, zinc-binding [Ruegeria sp. TM1040] gi|99038047|gb|ABF64659.1| CMP/dCMP deaminase zinc-binding [Ruegeria sp. TM1040] Length = 144 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 71/129 (55%), Positives = 88/129 (68%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV V K+++RAGNR REL D TAHAE+LAIR C L E L DLYVTL Sbjct: 15 GEVPVGAVLVSPEGKVVARAGNRTRELNDPTAHAEVLAIRAACAALGSERLLGHDLYVTL 74 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCAAAI+ ARI R+YYGAS+PK GG+ +G + HH+PE+Y G S +S + Sbjct: 75 EPCAMCAAAIAAARIARVYYGASDPKSGGVAHGACVFDHPQSHHAPEVYEGFSAAQSEAL 134 Query: 141 IQDFFKERR 149 ++ FF RR Sbjct: 135 LRAFFALRR 143 >gi|167648591|ref|YP_001686254.1| CMP/dCMP deaminase zinc-binding [Caulobacter sp. K31] gi|167351021|gb|ABZ73756.1| CMP/dCMP deaminase zinc-binding [Caulobacter sp. K31] Length = 146 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 67/144 (46%), Positives = 91/144 (63%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+EA+ AA E PVGAV + + +I++RAGN D TAHAEI AIR+ Sbjct: 1 MAVALDEARAAAQAGETPVGAVILDPASGEILARAGNGPIGAHDPTAHAEISAIRLAAAK 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L ++ L VTLEPC MCA AIS ARI R+ +GA +PKGG + +G +F+ TCH Sbjct: 61 LGNYRLTDLTLVVTLEPCAMCAGAISHARIGRVVFGAEDPKGGAVVHGPRFFAQPTCHWR 120 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+ G+ Q S +++ FF+ RR Sbjct: 121 PEVTGGVMAQESADLLRGFFRARR 144 >gi|284049062|ref|YP_003399401.1| CMP/dCMP deaminase zinc-binding protein [Acidaminococcus fermentans DSM 20731] gi|283953283|gb|ADB48086.1| CMP/dCMP deaminase zinc-binding protein [Acidaminococcus fermentans DSM 20731] Length = 159 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 69/145 (47%), Positives = 90/145 (62%), Gaps = 4/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ AA EIPVGAV V + ++++R NR + +D TAHAE L IR CR+L Sbjct: 17 FMEMALEEARQAAREGEIPVGAVLVRDGQVLARDHNRREQDRDATAHAEFLVIRQACRLL 76 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA--TCHH 124 + L + LYVTLEPC MCA AI AR+ RL YGA + G G+QF A + + Sbjct: 77 RRWRLSDTTLYVTLEPCPMCAGAIWNARVGRLVYGAWDSAAGSC--GSQFNLPAHPSLNF 134 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ R+I+QDF K RR Sbjct: 135 RTEVTAGVLEEECRKILQDFLKARR 159 >gi|317051389|ref|YP_004112505.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum S5] gi|316946473|gb|ADU65949.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum S5] Length = 167 Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 73/145 (50%), Positives = 93/145 (64%), Gaps = 5/145 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ ALEEA+ AA R E+PVGAV V + +II+RAGNR E +D TAHAE+LAIR Sbjct: 13 FMAVALEEARQAAQRGEVPVGAVIVRHGEIIARAGNRKEEHRDPTAHAEVLAIREAAAAC 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CHH 124 + L +V+LYVTLEPC MC AI ARI R+YY S+ K GGI + F A +H Sbjct: 73 ANWRLEDVELYVTLEPCVMCCGAIIAARIPRVYYACSDEKYGGI---SLFAMTADQRLNH 129 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + G+ EQR RQ+++ FF RR Sbjct: 130 QVDARRGLLEQRCRQLLEAFFSTRR 154 >gi|259415788|ref|ZP_05739708.1| cytidine and deoxycytidylate deaminase family protein [Silicibacter sp. TrichCH4B] gi|259347227|gb|EEW59004.1| cytidine and deoxycytidylate deaminase family protein [Silicibacter sp. TrichCH4B] Length = 150 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 81/144 (56%), Positives = 103/144 (71%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ ALEEAQ AA R E+PVGAV V + ++++RAGNR REL D TAHAE+L IR GC + Sbjct: 6 FMAEALEEAQAAAARGEVPVGAVLVNPSGEVVARAGNRTRELNDPTAHAEVLVIRAGCAV 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L E L DLYVTLEPC MCAAAI+ AR+ R+YYGAS+PK GG+ +G + HH Sbjct: 66 LGSERLTGHDLYVTLEPCAMCAAAIAAARVARVYYGASDPKSGGVAHGACVFDHPQAHHV 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+Y G S +S +++DFF +RR Sbjct: 126 PEVYDGFSASQSEALLKDFFAKRR 149 >gi|254466312|ref|ZP_05079723.1| cytosine deaminase [Rhodobacterales bacterium Y4I] gi|206687220|gb|EDZ47702.1| cytosine deaminase [Rhodobacterales bacterium Y4I] Length = 156 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/143 (51%), Positives = 98/143 (68%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE+A+ AA R E+PVGA + + ++ + AGNR REL D TAHAEIL IR C L Sbjct: 7 MDKALEQARAAAARGEVPVGAALIAPDGQVAALAGNRTRELNDPTAHAEILTIREACARL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPC MCAAAI+ ARIRR+YYGA++PK GG+ +G ++ HH P Sbjct: 67 GSERLTGYDLYVTLEPCAMCAAAIAAARIRRVYYGAADPKSGGVAHGACVFSHPQAHHVP 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GI+E + ++++FF +R Sbjct: 127 EVYDGIAEGEASALLKEFFAGKR 149 >gi|296533928|ref|ZP_06896452.1| cytosine deaminase [Roseomonas cervicalis ATCC 49957] gi|296265745|gb|EFH11846.1| cytosine deaminase [Roseomonas cervicalis ATCC 49957] Length = 147 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/140 (46%), Positives = 90/140 (64%), Gaps = 1/140 (0%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 AL+EA++AA R E+PVGAV +++ RAGNR + D +AHAE+LA+R L Sbjct: 7 ALQEARDAAARGEVPVGAVVTDAAGRVLGRAGNRVEQDHDASAHAEMLALRQAAAALGSP 66 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 LP L VTLEPC MCA A S RIRR+ +GA +PKGGG+E+G + Y +CHH+PE+ Sbjct: 67 RLPGCTLTVTLEPCPMCAQAASFFRIRRVVFGAYDPKGGGVEHGARIYAAPSCHHAPEVV 126 Query: 130 PGISEQRSRQIIQDFFKERR 149 G+ E ++++FF R Sbjct: 127 GGVREGECATLLREFFAALR 146 >gi|206889673|ref|YP_002249189.1| cytosine deaminase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741611|gb|ACI20668.1| cytosine deaminase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 154 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 69/143 (48%), Positives = 88/143 (61%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ A + EIPVGA+ V+N +IIS+A N D TAHAEILAIR RIL Sbjct: 10 FMKEALKEAEKAYEKGEIPVGALIVVNGEIISKAHNIKETTFDPTAHAEILAIREAARIL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVT EPC MC+ AI +RI+RL YG ++PKGG + + +H Sbjct: 70 GAWRLTDATLYVTKEPCIMCSGAIVNSRIKRLVYGCNDPKGGAVVSLYNILNDKRLNHQV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI E+ R I++ FFKE R Sbjct: 130 EITNGILEEECRVILKRFFKELR 152 >gi|83588899|ref|YP_428908.1| tRNA-adenosine deaminase [Moorella thermoacetica ATCC 39073] gi|83571813|gb|ABC18365.1| tRNA-adenosine deaminase [Moorella thermoacetica ATCC 39073] Length = 150 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/145 (44%), Positives = 88/145 (60%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + +M AL+EA+ A E+P+GAV V +II+RAGNR L D TAHAEI+A+R R Sbjct: 4 HFYMGEALDEARKAFDLGEVPIGAVIVAGGEIIARAGNRRETLADPTAHAEIIALRAAAR 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L LYVTLEPC MCA A+ ARIR+L YGA + + G +++ H Sbjct: 64 VRGDWRLTGATLYVTLEPCPMCAGALVQARIRQLVYGAPDLRSGAVDSVVNLVENPHFDH 123 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ PGI E+ R++I+ FF+ RR Sbjct: 124 QVEVIPGIREEECRELIKKFFQMRR 148 >gi|328956593|ref|YP_004373979.1| tRNA specific adenosine deaminase [Carnobacterium sp. 17-4] gi|328672917|gb|AEB28963.1| tRNA specific adenosine deaminase [Carnobacterium sp. 17-4] Length = 174 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 63/143 (44%), Positives = 85/143 (59%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA A + E+P+GA+ VLN KII R NR E D T HAE+LAI+ R L Sbjct: 10 FMQEAIKEAHKAEEKLEVPIGAIVVLNGKIIGRGHNRREESNDATTHAEMLAIQEANRYL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E L+VTLEPC MC+ A+ L+R++ LYYGAS+PKGG T +H Sbjct: 70 GNWRLEEAQLFVTLEPCPMCSGAMILSRVKELYYGASDPKGGTAGTLMNLLTDERFNHQV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I + EQ +++ FF+E R Sbjct: 130 QIESSLLEQECGELLSTFFRELR 152 >gi|83952775|ref|ZP_00961505.1| cytidine and deoxycytidylate deaminase family protein [Roseovarius nubinhibens ISM] gi|83835910|gb|EAP75209.1| cytidine and deoxycytidylate deaminase family protein [Roseovarius nubinhibens ISM] Length = 151 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 76/143 (53%), Positives = 95/143 (66%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA+ AA R E+PVGAV V + +I+ GNR R D TAHAE+L IR GC +L Sbjct: 1 MDRALDEARAAAARGEVPVGAVLVGPDGAVIAADGNRTRAGHDPTAHAEMLVIRAGCAVL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPC MCAAAIS AR+ R+YYGA +PK GG+ +G + ++ CHH P Sbjct: 61 GVERLTGCDLYVTLEPCAMCAAAISAARVARVYYGAGDPKSGGVAHGARVFSHPQCHHVP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EIY GI S +++ FF RR Sbjct: 121 EIYDGIGGAESEALLRAFFAARR 143 >gi|218289065|ref|ZP_03493302.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius LAA1] gi|218240890|gb|EED08068.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius LAA1] Length = 156 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 64/143 (44%), Positives = 86/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE A+ AA E+PVGAV V N +I+ NR +D TAHAE+LAI R L Sbjct: 10 FMRRALELAEEAARWGEVPVGAVVVENGRIVGEGFNRRETWRDGTAHAEMLAIEEASRRL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA AI L+R++RL YGA++ KGG + + + +H+P Sbjct: 70 GGWRLTNCVLYVTLEPCPMCAGAIVLSRVQRLVYGATDAKGGAVASKVRLLEPGLWNHAP 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I GI +++ DFF++RR Sbjct: 130 QITSGILADDCAKLLTDFFRKRR 152 >gi|223939608|ref|ZP_03631483.1| CMP/dCMP deaminase zinc-binding [bacterium Ellin514] gi|223891766|gb|EEF58252.1| CMP/dCMP deaminase zinc-binding [bacterium Ellin514] Length = 168 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/149 (44%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ N FM AL +A A R E+P+GAV V +II+RA N+ LKD TAHAE+LAI Sbjct: 9 LQSDNYFMGEALRQAVKAYDREEVPIGAVIVREGRIIARAFNQVETLKDATAHAEMLAIT 68 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L E LYVT EPC MCA AI R+ R+ +G S+PKGGG Sbjct: 69 QAEAAVGDWRLNECTLYVTKEPCPMCAGAIVHVRLSRVVFGLSDPKGGGAGGAMNLLQFP 128 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 T +H EI G+ EQ R ++Q FF E+R Sbjct: 129 TLNHRAEITHGVREQECRSLLQQFFSEQR 157 >gi|189184848|ref|YP_001938633.1| cytosine deaminase [Orientia tsutsugamushi str. Ikeda] gi|189181619|dbj|BAG41399.1| cytosine deaminase [Orientia tsutsugamushi str. Ikeda] Length = 155 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 64/146 (43%), Positives = 91/146 (62%), Gaps = 2/146 (1%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +FM A+E+A A E+PVG V V I++RA N+ + T HAEI+AI C Sbjct: 1 MFMLQAIEQASQAFNLGEVPVGVVMVNRATRTILTRAYNKVETTLNPTFHAEIIAINKAC 60 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 +LS + L D+YV+LEPC MCAAA+S RI R+++GA + K G IENG + + T + Sbjct: 61 SLLSCKYLHGYDIYVSLEPCAMCAAALSHVRIDRIFFGAYDEKFGAIENGVRLFYNTTVY 120 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 + PEIY GI E +S++++Q FF R Sbjct: 121 YKPEIYGGIMELQSKELLQKFFSNLR 146 >gi|303243154|ref|ZP_07329591.1| CMP/dCMP deaminase zinc-binding [Acetivibrio cellulolyticus CD2] gi|302589304|gb|EFL59115.1| CMP/dCMP deaminase zinc-binding [Acetivibrio cellulolyticus CD2] Length = 154 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 64/149 (42%), Positives = 89/149 (59%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++G +FM AL+EA+ A ++E PVGAV V + IISR N D T HAEI AI+ Sbjct: 1 MEQGYLFMKEALKEAKKAYKKDETPVGAVIVKDGVIISRGHNEKEMKNDPTLHAEISAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L+ L + DLYVTLEPC MCA AI AR+ RL+ G +PK G + + + Sbjct: 61 KACKKLNTWRLNDCDLYVTLEPCAMCAGAIIQARVGRLFIGTPDPKAGAVGSVVDILGVE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E++ G+ + I++DFFKE R Sbjct: 121 KFNHKVEVFYGLLMEECSMILKDFFKELR 149 >gi|148284933|ref|YP_001249023.1| cytosine deaminase [Orientia tsutsugamushi str. Boryong] gi|146740372|emb|CAM80811.1| cytosine deaminase [Orientia tsutsugamushi str. Boryong] Length = 155 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 63/146 (43%), Positives = 91/146 (62%), Gaps = 2/146 (1%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +FM A+E+A A E+PVG V V +++RA N+ + T HAEI+AI C Sbjct: 1 MFMLQAIEQASQAFNLGEVPVGVVIVNRATKTVLTRAYNKVETTLNPTFHAEIIAINKAC 60 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 +LS + L D+YV+LEPC MCAAA+S RI R+++GA + K G IENG + + T + Sbjct: 61 SLLSCKYLHGYDIYVSLEPCAMCAAALSHVRIDRIFFGAYDEKFGAIENGVRLFYNTTVY 120 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 + PEIY GI E +S++++Q FF R Sbjct: 121 YKPEIYGGIMELQSKELLQKFFSNLR 146 >gi|94969013|ref|YP_591061.1| tRNA-adenosine deaminase [Candidatus Koribacter versatilis Ellin345] gi|94551063|gb|ABF40987.1| tRNA-adenosine deaminase [Candidatus Koribacter versatilis Ellin345] Length = 152 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 65/144 (45%), Positives = 87/144 (60%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FM AL EA A E+P+GAV V +KII R NR D TAHAEI+AIR R Sbjct: 5 LFMEEALREAARAQASGEVPIGAVVVYQDKIIGRGWNRPAFECDPTAHAEIIAIREAGRE 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + +L+VTLEPC MCA AI+ ARIRRL Y A +PK G +++ Q +H Sbjct: 65 LGNYRLTDCELFVTLEPCAMCAGAITHARIRRLIYAADDPKAGAVKSALQVLNHPALNHQ 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 EI G+ R+ +++Q FF+++R Sbjct: 125 VEITSGVLAGRAMEMLQAFFRDKR 148 >gi|94501251|ref|ZP_01307773.1| cytidine/deoxycytidylate deaminase family protein [Oceanobacter sp. RED65] gi|94426678|gb|EAT11664.1| cytidine/deoxycytidylate deaminase family protein [Oceanobacter sp. RED65] Length = 164 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 64/143 (44%), Positives = 89/143 (62%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A+++A+ A NE+PVGAV VL+ ++I N+ D TAHAE++A+R + + Sbjct: 10 FMALAIQQAKKADALNEVPVGAVVVLDGEVIGEGYNQPISGCDPTAHAEVMALRQAAKNV 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S L DLYVT+EPCTMCA AI +RIRRL YGA+ PK G IE+ T + +H Sbjct: 70 SNYRLVNADLYVTIEPCTMCAGAIVHSRIRRLVYGATEPKAGVIESQQTILTQSYFNHRV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI + I+Q FF+ RR Sbjct: 130 EVVSGILLDQCTDIVQAFFRRRR 152 >gi|313900948|ref|ZP_07834438.1| cytidine and deoxycytidylate deaminase zinc-binding region [Clostridium sp. HGF2] gi|312954368|gb|EFR36046.1| cytidine and deoxycytidylate deaminase zinc-binding region [Clostridium sp. HGF2] Length = 151 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 88/143 (61%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA+ A +E+P+G V V ++KII+R N + HAEI+AI+ C+ + Sbjct: 5 YMRAALREAEKAKKIDEVPIGCVIVKDDKIIARGHNLRETKQQSINHAEIIAIQKACKKV 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + DLYVTLEPC MCA AI +RIR + YG ++PKGG IE+ Y +H P Sbjct: 65 GSWRLEDCDLYVTLEPCCMCAGAILQSRIRTVIYGTADPKGGSIESTLHMYEQPGYNHYP 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + Q++++FFKE+R Sbjct: 125 KVESGVLQNECSQLLKNFFKEKR 147 >gi|258517370|ref|YP_003193592.1| CMP/dCMP deaminase zinc-binding [Desulfotomaculum acetoxidans DSM 771] gi|257781075|gb|ACV64969.1| CMP/dCMP deaminase zinc-binding [Desulfotomaculum acetoxidans DSM 771] Length = 160 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 85/143 (59%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA A L+ E+P+GAVAVL ++I R N L D TAHAE+LA+R R + Sbjct: 5 FMRIALEEANKAYLKGEVPIGAVAVLGRQVIGRGHNLRESLNDSTAHAEMLALREAARFI 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L EV LY T+EPC MC+ A+ R++ L YGA + K G +++G A +H Sbjct: 65 GDWRLNEVILYSTIEPCAMCSGALVQFRVKLLVYGAPDVKFGAVDSGLDIVRQARFNHRV 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ R+I+Q FF+E R Sbjct: 125 EVVSGVLADECREIMQRFFRELR 147 >gi|294340450|emb|CAZ88831.1| tRNA-specific adenosine deaminase [Thiomonas sp. 3As] Length = 187 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 64/149 (42%), Positives = 87/149 (58%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ FM AL++AQNA L E+PVGAV V + K+I+ NR D TAHAEI+AIR Sbjct: 9 LEADRAFMRLALDQAQNAWLLGEVPVGAVIVKDGKVIATGYNRPIGDHDPTAHAEIVAIR 68 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L LPE LYVTLEPC MCA A+ AR R+ +GA +PK G + + Sbjct: 69 QAAHLLGNYRLPECTLYVTLEPCAMCAMALLHARFARVVFGARDPKTGAAGSVVDLFAEP 128 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I P I ++ ++QDFF+ RR Sbjct: 129 RLNHHCDITPEIEQEACSALLQDFFRARR 157 >gi|134297898|ref|YP_001111394.1| CMP/dCMP deaminase [Desulfotomaculum reducens MI-1] gi|134050598|gb|ABO48569.1| tRNA-adenosine deaminase [Desulfotomaculum reducens MI-1] Length = 151 Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 64/144 (44%), Positives = 87/144 (60%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FM AL EAQ AA++ E+P+GAV V +++I R + L D +AHAEILA+R + Sbjct: 5 LFMREALIEAQKAAVKGEVPIGAVVVWKDEVIGRGYDLRESLCDASAHAEILAMRKAAKH 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + LYVT+EPC MCA AI RI RL YGA N K G ++ A +H Sbjct: 65 LGDWRLNDATLYVTVEPCAMCAGAIVQFRINRLVYGAPNAKSGSVDTILNIVQEARFNHR 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ GI E + ++IIQ+FF+E R Sbjct: 125 VEVIAGILEDQCKEIIQNFFRELR 148 >gi|119476440|ref|ZP_01616791.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [marine gamma proteobacterium HTCC2143] gi|119450304|gb|EAW31539.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [marine gamma proteobacterium HTCC2143] Length = 159 Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 85/143 (59%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A++ AQ A E+PVGAV VLN+K+I N+ L D TAHAE++AI+ + L Sbjct: 9 YMEAAIKLAQKAGALGEVPVGAVVVLNDKVIGEGFNQPISLSDPTAHAEMVAIKDAAKAL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LPE LYVT+EPCTMCA A+ AR++R+ YGA+ K G E+ + +H Sbjct: 69 QNYRLPEATLYVTIEPCTMCAGAMVHARVKRVVYGATESKSGVAESNGCLFDNTYLNHKV 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI +R +I DFF RR Sbjct: 129 EVVGGIMAERCSNLISDFFAARR 151 >gi|163740840|ref|ZP_02148233.1| cytidine and deoxycytidylate deaminase family protein [Phaeobacter gallaeciensis 2.10] gi|161385831|gb|EDQ10207.1| cytidine and deoxycytidylate deaminase family protein [Phaeobacter gallaeciensis 2.10] Length = 147 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 66/129 (51%), Positives = 87/129 (67%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGA + ++++RAGNR RE D TAHAE+L IR C E L DLYVTL Sbjct: 15 GEVPVGAALISPEGQVVARAGNRTRERSDPTAHAEVLVIREACAAAGSERLTGHDLYVTL 74 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCAAAI+ ARIRR+YYGAS+PK GG+ +G ++ HH+PE+Y GIS + + + Sbjct: 75 EPCAMCAAAIAAARIRRVYYGASDPKSGGVAHGACVFSHPQAHHAPEVYEGISAEPAETL 134 Query: 141 IQDFFKERR 149 ++ FF RR Sbjct: 135 LKAFFAARR 143 >gi|296136215|ref|YP_003643457.1| CMP/dCMP deaminase zinc-binding protein [Thiomonas intermedia K12] gi|295796337|gb|ADG31127.1| CMP/dCMP deaminase zinc-binding protein [Thiomonas intermedia K12] Length = 187 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/149 (42%), Positives = 87/149 (58%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ FM AL++AQNA L E+PVGAV V + K+I+ NR D TAHAEI+A+R Sbjct: 9 LEADRAFMRLALDQAQNAWLLGEVPVGAVIVKDGKVIATGYNRPIGDHDPTAHAEIVALR 68 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L LPE LYVTLEPC MCA A+ AR R+ +GA +PK G + + Sbjct: 69 QAAHLLGNYRLPECTLYVTLEPCAMCAMALLHARFARVVFGARDPKTGAAGSVVDLFAEP 128 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I P I ++ ++QDFF+ RR Sbjct: 129 RLNHHCDITPEIEQEACSALLQDFFRARR 157 >gi|163791639|ref|ZP_02186036.1| cytidine/deoxycytidylate deaminase family protein [Carnobacterium sp. AT7] gi|159873088|gb|EDP67195.1| cytidine/deoxycytidylate deaminase family protein [Carnobacterium sp. AT7] Length = 174 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/143 (44%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA A + E+P+GAV VLN KII R N E D T HAE+LAI+ R L Sbjct: 10 FMQEAIKEAHKAKEKLEVPIGAVVVLNGKIIGRGHNIREESNDATTHAEMLAIQEANRYL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E L+VTLEPC MC+ A+ L+RI+ LYYGAS+PKGG +H Sbjct: 70 GNWRLEETQLFVTLEPCPMCSGAMILSRIKELYYGASDPKGGTAGTLMNLLDDNRFNHQV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ E+ ++ +FF+E R Sbjct: 130 QIEKGLLEEECSDLLSNFFRELR 152 >gi|86140015|ref|ZP_01058579.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter sp. MED193] gi|85823265|gb|EAQ43476.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter sp. MED193] Length = 148 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/130 (53%), Positives = 89/130 (68%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+PVGAV V + +I ++AGNR REL D TAHAEIL +R C E L DLYVT Sbjct: 19 RGEVPVGAVLVAPDGRIAAQAGNRTRELSDPTAHAEILVLREACAAGKTERLQGFDLYVT 78 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCAAAI+ AR+RR+YYGAS+PK GG+ +G ++ HH+PEIY GI E + + Sbjct: 79 LEPCAMCAAAIAAARLRRVYYGASDPKSGGVAHGACVFSHPQAHHTPEIYEGIGEVEAAE 138 Query: 140 IIQDFFKERR 149 +++ FF R Sbjct: 139 LLRAFFSHLR 148 >gi|326802964|ref|YP_004320782.1| cytidine and deoxycytidylate deaminase zinc-binding region [Aerococcus urinae ACS-120-V-Col10a] gi|326651114|gb|AEA01297.1| cytidine and deoxycytidylate deaminase zinc-binding region [Aerococcus urinae ACS-120-V-Col10a] Length = 162 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 60/147 (40%), Positives = 90/147 (61%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K + FM A+++A+ A +E+P+GAVAV ++I R N + +D T HAE+ AIR Sbjct: 4 KADYFMQAAIDQAKKAQDLDEVPIGAVAVYRGQVIGRGYNLREQSQDATDHAEMQAIRQA 63 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L+ L +VDLYVTLEPC+MC+ AI L+RIR LY+GAS+PK G + Sbjct: 64 NRYLNNWRLNDVDLYVTLEPCSMCSGAIVLSRIRCLYFGASDPKAGTCGSLMNLVQDPRL 123 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + Q+++ FFK+ R Sbjct: 124 NHQVDLVSGLRGEECSQLLKSFFKDLR 150 >gi|222475328|ref|YP_002563745.1| cytosine deaminase (ssnA) [Anaplasma marginale str. Florida] gi|222419466|gb|ACM49489.1| cytosine deaminase (ssnA) [Anaplasma marginale str. Florida] Length = 154 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 68/144 (47%), Positives = 92/144 (63%), Gaps = 5/144 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A++EA ++ E+PVGAV V ++ S N D TAHAE+LAIR C Sbjct: 9 YMRLAMQEAVSSP--AEVPVGAVVVDERGVVVSSKHNLTLRNSDPTAHAEMLAIREACLH 66 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 LS +L D+YVTLEPC MCA AISL+RIRRLY+GA N K GG+E+G + + CHH Sbjct: 67 LSTHVLDNCDMYVTLEPCAMCAYAISLSRIRRLYFGAYNAKCGGVEHGARVFRF--CHHI 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+Y G E+ + +I++ FF + R Sbjct: 125 PEVYGGFLERENAEILKSFFYKLR 148 >gi|302390668|ref|YP_003826489.1| tRNA-adenosine deaminase [Thermosediminibacter oceani DSM 16646] gi|302201296|gb|ADL08866.1| tRNA-adenosine deaminase [Thermosediminibacter oceani DSM 16646] Length = 152 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 60/148 (40%), Positives = 87/148 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM AL+EA+ A ++E+PVGAV II+RA N +D TAHAE+LAI+ Sbjct: 4 KDHEFFMREALKEARKAFEQDEVPVGAVIAYEGSIIARAHNLRERSQDATAHAEVLAIKA 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C + L LYVTLEPC MCA AI LAR+ R+ +GA +PK G + + + Sbjct: 64 ACEAMGTWRLTGCSLYVTLEPCPMCAGAIILARLDRVVFGAPDPKAGAAGSVVDLFKVER 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ + +++DFF+++R Sbjct: 124 FNHHPEVVSGVLAEECGILLKDFFRQKR 151 >gi|309390267|gb|ADO78147.1| tRNA-adenosine deaminase [Halanaerobium praevalens DSM 2228] Length = 154 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 87/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA+ A R E+P+GAV V N++++ R N + +D T HAEI+A+R Sbjct: 7 YMKMALAEARKAYQRAEVPIGAVVVCNDQVVGRGFNLREQTQDPTTHAEIIALREAASNK 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI +RI+RL YGAS+PK G + + Q +H Sbjct: 67 VSWRLEDCQLYVTLEPCPMCAGAILQSRIKRLVYGASDPKAGAVRSLYQLLDDNRFNHQV 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI E+ S Q+++DFF+E R Sbjct: 127 KVEAGIMEKESAQLLKDFFRELR 149 >gi|269958624|ref|YP_003328411.1| putative cytosine/adenosine deaminase [Anaplasma centrale str. Israel] gi|269848453|gb|ACZ49097.1| putative cytosine/adenosine deaminase [Anaplasma centrale str. Israel] Length = 154 Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 66/144 (45%), Positives = 92/144 (63%), Gaps = 5/144 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+ EA ++ E+PVGA+ V + IS N D TAHAE+LAIR C Sbjct: 9 YMRLAMLEAVSSPA--EVPVGAIVVDERGVVISSRHNLTLRNSDPTAHAEMLAIREACLH 66 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 S +L D+YVTLEPC MCA AISL+RIRRLY+GA N K GG+E+G + + C+H Sbjct: 67 FSTHVLNNCDMYVTLEPCAMCAYAISLSRIRRLYFGAYNVKCGGVEHGARVFRF--CNHI 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+Y G E+ + +I+++FF++ R Sbjct: 125 PEVYGGFLERENAEILKNFFQKLR 148 >gi|89070783|ref|ZP_01158036.1| cytidine and deoxycytidylate deaminase family protein [Oceanicola granulosus HTCC2516] gi|89043625|gb|EAR49832.1| cytidine and deoxycytidylate deaminase family protein [Oceanicola granulosus HTCC2516] Length = 149 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 75/111 (67%) Query: 39 RAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 RAGNR REL D TAHAE+LAIR C + LP DLYVTLEPC MCAAAI ARI RL Sbjct: 39 RAGNRTRELADPTAHAELLAIRAACAAAGSDRLPGHDLYVTLEPCPMCAAAIGFARIARL 98 Query: 99 YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 YYGA++PK GG+ +G + HH PEIY GI+ + +++DFF + R Sbjct: 99 YYGAADPKSGGVAHGPRVLAHPQSHHRPEIYDGIAAGPAAALLRDFFADLR 149 >gi|110679276|ref|YP_682283.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter denitrificans OCh 114] gi|109455392|gb|ABG31597.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter denitrificans OCh 114] Length = 155 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 71/130 (54%), Positives = 89/130 (68%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+PVGAV V + II+ AGN+ R D TAHAEILAIR C +L E L + LYVT Sbjct: 26 RGEVPVGAVIVAPDGAIIAAAGNQTRADHDPTAHAEILAIRRACAVLGSERLLDHALYVT 85 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCAAAIS ARI RLYYGAS+PK GG+ G + ++ CHH+PE++ GI+ S Sbjct: 86 LEPCAMCAAAISAARISRLYYGASDPKSGGVAQGARVFSHPQCHHAPEVFDGIAAAESEA 145 Query: 140 IIQDFFKERR 149 +++ FF RR Sbjct: 146 MLRGFFTARR 155 >gi|329851126|ref|ZP_08265883.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Asticcacaulis biprosthecum C19] gi|328839972|gb|EGF89544.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Asticcacaulis biprosthecum C19] Length = 154 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 2/146 (1%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M AL+ A AA E+P+GA+ + +++ A N L D AHAEILA+R Sbjct: 7 TLMLAALDLAHEAARSGEVPIGALIFDPSSKTVVATARNSPILLNDPCAHAEILALRAAG 66 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + + L + LYVTLEPC MCA AIS ARI R+ YGA +PKGG + +G +F+ TCH Sbjct: 67 QAIGNYRLGGLWLYVTLEPCAMCAGAISHARIARVIYGAPDPKGGAVAHGPKFFAQPTCH 126 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 PE+ G+ + S +++ FFKERR Sbjct: 127 WRPEVTDGVLGEDSSALLKGFFKERR 152 >gi|56416962|ref|YP_154036.1| cytosine deaminase [Anaplasma marginale str. St. Maries] gi|56388194|gb|AAV86781.1| cytosine deaminase [Anaplasma marginale str. St. Maries] Length = 154 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/150 (46%), Positives = 94/150 (62%), Gaps = 5/150 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAI 59 M + +M A++EA ++ E+PVGAV V ++ S N D TAHAE+LAI Sbjct: 3 MLSESPYMRLAMQEAVSSP--AEVPVGAVVVDERGVVVSSRHNLTLRNSDPTAHAEMLAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R C LS +L D+YVTLEPC MCA AISL+RIRRLY+GA N K GG+E+G + + Sbjct: 61 REACLHLSTHVLDNCDMYVTLEPCAMCAYAISLSRIRRLYFGAYNAKCGGVEHGARVFRF 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 CHH PE+Y G E+ + +I++ FF + R Sbjct: 121 --CHHIPEVYGGFLERENAEILKSFFYKLR 148 >gi|254995140|ref|ZP_05277330.1| cytosine deaminase (ssnA) [Anaplasma marginale str. Mississippi] gi|255003311|ref|ZP_05278275.1| cytosine deaminase (ssnA) [Anaplasma marginale str. Puerto Rico] gi|255004436|ref|ZP_05279237.1| cytosine deaminase (ssnA) [Anaplasma marginale str. Virginia] Length = 153 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/150 (46%), Positives = 94/150 (62%), Gaps = 5/150 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAI 59 M + +M A++EA ++ E+PVGAV V ++ S N D TAHAE+LAI Sbjct: 2 MLSESPYMRLAMQEAVSSP--AEVPVGAVVVDERGVVVSSRHNLTLRNSDPTAHAEMLAI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R C LS +L D+YVTLEPC MCA AISL+RIRRLY+GA N K GG+E+G + + Sbjct: 60 REACLHLSTHVLDNCDMYVTLEPCAMCAYAISLSRIRRLYFGAYNAKCGGVEHGARVFRF 119 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 CHH PE+Y G E+ + +I++ FF + R Sbjct: 120 --CHHIPEVYGGFLERENAEILKSFFYKLR 147 >gi|20806575|ref|NP_621746.1| cytosine/adenosine deaminase [Thermoanaerobacter tengcongensis MB4] gi|20515016|gb|AAM23350.1| Cytosine/adenosine deaminases [Thermoanaerobacter tengcongensis MB4] Length = 148 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/145 (44%), Positives = 87/145 (60%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM AL+EA+ + E+PVGAV V + +II+R N+ KD TAHAEI+AIR CR Sbjct: 3 NKFMEEALKEAKKSYELGEVPVGAVIVKDGEIIARGHNQKESSKDATAHAEIIAIREACR 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + LYVTLEPC MCA AI ARI+R+Y G +PK G + Sbjct: 63 RLGSWRLEDCSLYVTLEPCPMCAGAIVEARIKRVYIGTESPKEGAAGSVINILNNKELGT 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 S E+Y GI E+ ++++++ FF+ R Sbjct: 123 STEVYFGIMEEEAKELLKKFFENLR 147 >gi|332800258|ref|YP_004461757.1| CMP/dCMP deaminase zinc-binding protein [Tepidanaerobacter sp. Re1] gi|332697993|gb|AEE92450.1| CMP/dCMP deaminase zinc-binding protein [Tepidanaerobacter sp. Re1] Length = 160 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 62/148 (41%), Positives = 88/148 (59%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM A++EA+ A +E+P+GAV V +++I+RA N L+D TAHAE+LAIR Sbjct: 8 KDDFFFMRQAIQEAKRAMEIDEVPIGAVIVKADEVIARAHNLRETLQDATAHAELLAIRK 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C +L L LYVTLEPC MCA A+ L+R+ RL +GA +PKGG + Sbjct: 68 ACEVLGTWRLEGCTLYVTLEPCPMCAGAVILSRVDRLVFGAKDPKGGACGSLMNLPADER 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P+I GI I++ FF+++R Sbjct: 128 FNHRPKIAAGIMADECGNILKKFFQDKR 155 >gi|325270697|ref|ZP_08137293.1| tRNA-specific adenosine deaminase [Prevotella multiformis DSM 16608] gi|324986992|gb|EGC18979.1| tRNA-specific adenosine deaminase [Prevotella multiformis DSM 16608] Length = 199 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 67/149 (44%), Positives = 87/149 (58%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKK +M AL EA+ A EIPVGAV V ++II+RA N L DVTAHAE+ AI Sbjct: 56 MKKDLYYMRQALAEAEAAYREGEIPVGAVVVCRDRIIARAHNLTETLNDVTAHAEMQAIT 115 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M L + L + LYVTLEPCTMCA AI A++RR+ YG + K G + Y Sbjct: 116 MAASGLGGKYLQDCTLYVTLEPCTMCAGAIGWAQLRRMVYGCPDEK-----RGYRLYAPR 170 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ E+ + ++Q FF+ERR Sbjct: 171 ALHPRAEVVCGVMEEECKALMQRFFRERR 199 >gi|114569170|ref|YP_755850.1| tRNA-adenosine deaminase [Maricaulis maris MCS10] gi|114339632|gb|ABI64912.1| tRNA-adenosine deaminase [Maricaulis maris MCS10] Length = 174 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 62/127 (48%), Positives = 81/127 (63%), Gaps = 2/127 (1%) Query: 25 PVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 P+GA+ V + I+++A NR D TAHAEILA+R L L ++LYVTLEP Sbjct: 35 PIGAIIVDPATDSIVAQAHNRPIADHDPTAHAEILALREAAAKLGNYRLTGLELYVTLEP 94 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCA AIS ARI RL +GAS+ KGG + +GT+F+ TCH PEI PGI +++ Sbjct: 95 CAMCAGAISHARIGRLVFGASDEKGGAVVSGTRFFEQPTCHWRPEIVPGILADEGAAMLK 154 Query: 143 DFFKERR 149 DFF+ RR Sbjct: 155 DFFRARR 161 >gi|160914820|ref|ZP_02077034.1| hypothetical protein EUBDOL_00828 [Eubacterium dolichum DSM 3991] gi|158433360|gb|EDP11649.1| hypothetical protein EUBDOL_00828 [Eubacterium dolichum DSM 3991] Length = 152 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 86/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA+ A L +E+P+G V V ++KII+R N + TAHAEI+AI CR L Sbjct: 5 FMVEAIKEAKKAELIDEVPIGCVIVKDDKIIARGHNLRESKQRSTAHAEIIAIEKACRKL 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MC+ AI +RI + YGA +PKGG +E+ Y + +H P Sbjct: 65 KSWRLEGCSLYVTLEPCPMCSGAILQSRIEHVVYGAKDPKGGCMESCMNMYEVKGFNHYP 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E +++ FFK +R Sbjct: 125 DVIGGVLEDECGSLLKTFFKRKR 147 >gi|148543562|ref|YP_001270932.1| tRNA-adenosine deaminase [Lactobacillus reuteri DSM 20016] gi|184152969|ref|YP_001841310.1| cytosine/adenosine deaminase [Lactobacillus reuteri JCM 1112] gi|227363478|ref|ZP_03847600.1| tRNA-adenosine deaminase [Lactobacillus reuteri MM2-3] gi|325681912|ref|ZP_08161430.1| tRNA-specific adenosine deaminase [Lactobacillus reuteri MM4-1A] gi|148530596|gb|ABQ82595.1| tRNA-adenosine deaminase [Lactobacillus reuteri DSM 20016] gi|183224313|dbj|BAG24830.1| cytosine/adenosine deaminase [Lactobacillus reuteri JCM 1112] gi|227071492|gb|EEI09793.1| tRNA-adenosine deaminase [Lactobacillus reuteri MM2-3] gi|324978556|gb|EGC15505.1| tRNA-specific adenosine deaminase [Lactobacillus reuteri MM4-1A] Length = 170 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 59/152 (38%), Positives = 90/152 (59%), Gaps = 7/152 (4%) Query: 1 MKKGNV-------FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAH 53 MKK N FM A+ EA+ A + +E+P+GA+ V + ++I R N + +DVT H Sbjct: 1 MKKNNSSLSEQQKFMKMAIAEAKQARILDEVPIGAIVVHDGQVIGRGHNMREKFQDVTYH 60 Query: 54 AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 AE+LAI C L L + DLYVTLEPC MC+ AI ARI+ +YYGA++PK G +++ Sbjct: 61 AEMLAIMEACTNLGSWRLEDCDLYVTLEPCIMCSGAIINARIKNVYYGAADPKAGAVDSL 120 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + + +H ++ GI Q++++FF Sbjct: 121 YHLLSDSRLNHQVNVHSGILGDECSQMLKNFF 152 >gi|329902676|ref|ZP_08273230.1| tRNA-specific adenosine-34 deaminase [Oxalobacteraceae bacterium IMCC9480] gi|327548648|gb|EGF33298.1| tRNA-specific adenosine-34 deaminase [Oxalobacteraceae bacterium IMCC9480] Length = 161 Score = 120 bits (300), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 87/145 (60%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +VFM A+++A NA E+PVGAV V + ++I+ N++ D TAHAEI+A+R G Sbjct: 4 SVFMRLAMDQAHNAWALGEVPVGAVLVKDGQVIATGFNQSIGTHDPTAHAEIMALRAGAS 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 +L LP +LYVTLEPC MCA A+ AR+ R+ YGAS+PK G + + A +H Sbjct: 64 LLGNYRLPGCELYVTLEPCAMCAGAMMHARLARVVYGASDPKTGCCGSVLDLFGQAQLNH 123 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + G+ +++DFF ERR Sbjct: 124 HTGLVGGVLADACSALLKDFFAERR 148 >gi|220932912|ref|YP_002509820.1| tRNA-adenosine deaminase [Halothermothrix orenii H 168] gi|219994222|gb|ACL70825.1| tRNA-adenosine deaminase [Halothermothrix orenii H 168] Length = 159 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 67/149 (44%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK FM ALEEA+ A E+P+GAV V N +I+ N D TAHAEI+AIR Sbjct: 1 MKTDEDFMELALEEARKALALEEVPIGAVVVCNGEIVGSGHNLKETENDPTAHAEIVAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R LS L E LYVT+EPC MCA AI AR++R+ YGA +PK G + Sbjct: 61 DAARKLSSWRLNECQLYVTIEPCPMCAGAIMQARLQRVVYGAVDPKAGVAGSLYNLLQDN 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ E+ G+ RQII+DFF E R Sbjct: 121 RFNHTVELKSGVLAAECRQIIKDFFSELR 149 >gi|332557706|ref|ZP_08412028.1| hypothetical protein RSWS8N_01605 [Rhodobacter sphaeroides WS8N] gi|332275418|gb|EGJ20733.1| hypothetical protein RSWS8N_01605 [Rhodobacter sphaeroides WS8N] Length = 150 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 66/115 (57%), Positives = 80/115 (69%), Gaps = 1/115 (0%) Query: 35 KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 ++++RAGNR REL D TAHAE+LAIR C L E L DLYVTLEPC MCAAAIS AR Sbjct: 35 QVVARAGNRCRELSDPTAHAEMLAIRAACATLG-ERLTGCDLYVTLEPCPMCAAAISAAR 93 Query: 95 IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 I RLYYGA++PK GG+ G + + CHH PEIY GI E + +++ FF RR Sbjct: 94 IARLYYGAADPKSGGVAQGARVFAHPQCHHVPEIYDGIGEAEAAALLRGFFSARR 148 >gi|254490420|ref|ZP_05103607.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Methylophaga thiooxidans DMS010] gi|224464386|gb|EEF80648.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Methylophaga thiooxydans DMS010] Length = 149 Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 85/143 (59%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL AQ A E+PVGAV VLNN+II N+ D TAHAEI+A+R C+++ Sbjct: 7 WMQRALALAQRAEAEGEVPVGAVIVLNNEIIGEGWNQPISANDATAHAEIIALRQACQLM 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + LP D+Y+TLEPC MCA A+ ARI ++ Y + PK G + +TL +H Sbjct: 67 NNYRLPGADMYITLEPCAMCAGALVHARINKVVYATAEPKTGAAGSCVDIFTLPNLNHRV 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ ++S Q+++ FF+ +R Sbjct: 127 STESGLLAEQSSQLLRQFFRGKR 149 >gi|163797849|ref|ZP_02191794.1| Cytosine/adenosine deaminase [alpha proteobacterium BAL199] gi|159176893|gb|EDP61460.1| Cytosine/adenosine deaminase [alpha proteobacterium BAL199] Length = 150 Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 68/134 (50%), Positives = 90/134 (67%), Gaps = 2/134 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 G+ +M+ AL +A++AA E+PVGAV V + ++++ AGNR D TAHAE+LAIR Sbjct: 3 GDGYMARALAQAESAASAGEVPVGAVVVHAPSGRVLAEAGNRVETDCDPTAHAEVLAIRA 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L L + DLYVTLEPC MCA AI+ AR+RRL +GA +PKGGG+E+G + T Sbjct: 63 AARALGAPRLVDCDLYVTLEPCAMCAQAIAHARLRRLVFGAYDPKGGGVEHGARVLEQPT 122 Query: 122 CHHSPEIYPGISEQ 135 CHH PEI G+ E Sbjct: 123 CHHRPEIVGGVEES 136 >gi|260584497|ref|ZP_05852244.1| cytidine/deoxycytidylate deaminase [Granulicatella elegans ATCC 700633] gi|260158015|gb|EEW93084.1| cytidine/deoxycytidylate deaminase [Granulicatella elegans ATCC 700633] Length = 170 Score = 119 bits (299), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 59/145 (40%), Positives = 89/145 (61%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K+ +FM AL+EAQ A + E+P+GAV VLN +II R N + +D T HAEI AIR Sbjct: 7 KEKEMFMREALKEAQKAYDKEEVPIGAVVVLNGEIIGRGHNLREKEQDATLHAEIKAIRQ 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 ++L L + +L+VTLEPC MC+ A+ L+R++++ +GA +PK G Sbjct: 67 ANQVLGSWRLEDCELFVTLEPCPMCSGAMILSRLKKVTFGAFDPKAGTAGTFMNLLQDER 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFK 146 +H E+ G+ E+ +QI++DFFK Sbjct: 127 FNHQVEVEHGVLEEECQQILKDFFK 151 >gi|288800754|ref|ZP_06406211.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp. oral taxon 299 str. F0039] gi|288332215|gb|EFC70696.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp. oral taxon 299 str. F0039] Length = 144 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/149 (44%), Positives = 88/149 (59%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK FM+ ALE+AQ A EIPVGAV V +KII+R+ N L DVTAHAE+ AI Sbjct: 1 MKGDEWFMTKALEQAQLALEAGEIPVGAVVVAKDKIIARSHNLTEMLCDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 G L + L E LYVTLEPC MCA AI +++ RL YGAS+ K G + + Sbjct: 61 SGTNSLGGKYLNECTLYVTLEPCVMCAGAIGWSQLGRLVYGASDDKRGFMR-----FAPN 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ E+ + IIQ+FF+ +R Sbjct: 116 ALHPKTKVTKGVMEEECKTIIQNFFRSKR 144 >gi|194468109|ref|ZP_03074095.1| CMP/dCMP deaminase zinc-binding [Lactobacillus reuteri 100-23] gi|194452962|gb|EDX41860.1| CMP/dCMP deaminase zinc-binding [Lactobacillus reuteri 100-23] Length = 170 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 59/152 (38%), Positives = 90/152 (59%), Gaps = 7/152 (4%) Query: 1 MKKGNV-------FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAH 53 MKK N FM A+ EA+ A + +E+P+GA+ V + ++I N + +DVT H Sbjct: 1 MKKNNSSLSEQQKFMKMAIAEAKQARILDEVPIGAIVVHDGQVIGCGHNMREKFQDVTYH 60 Query: 54 AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 AE+LAI C L L + DLYVTLEPC MC+ AI ARI+ +YYGA++PK G +++ Sbjct: 61 AEMLAIMEACTNLESWRLEDCDLYVTLEPCIMCSGAIINARIKNVYYGATDPKAGAVDSL 120 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + + +H ++ GI E Q++++FF Sbjct: 121 YHLLSDSRLNHQVNVHSGILEDECSQMLKNFF 152 >gi|77462818|ref|YP_352322.1| hypothetical protein RSP_2267 [Rhodobacter sphaeroides 2.4.1] gi|77387236|gb|ABA78421.1| cytidine and deoxycytidylate deaminase family protein [Rhodobacter sphaeroides 2.4.1] Length = 150 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 65/115 (56%), Positives = 80/115 (69%), Gaps = 1/115 (0%) Query: 35 KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 ++++RAGNR REL D TAHAE+LAIR C L E L DLYVTLEPC MCAAAIS AR Sbjct: 35 QVVARAGNRCRELSDPTAHAEMLAIRAACATLG-ERLTGCDLYVTLEPCPMCAAAISAAR 93 Query: 95 IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 I RLYYGA++PK GG+ G + + CHH PE+Y GI E + +++ FF RR Sbjct: 94 IARLYYGAADPKSGGVAQGARVFAHPQCHHVPEVYDGIGEAEAAALLRGFFSARR 148 >gi|221638686|ref|YP_002524948.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides KD131] gi|221159467|gb|ACM00447.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides KD131] Length = 144 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 65/115 (56%), Positives = 80/115 (69%), Gaps = 1/115 (0%) Query: 35 KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 ++++RAGNR REL D TAHAE+LAIR C L E L DLYVTLEPC MCAAAIS AR Sbjct: 29 QVVARAGNRCRELSDPTAHAEMLAIRAACATLG-ERLTGCDLYVTLEPCPMCAAAISAAR 87 Query: 95 IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 I RLYYGA++PK GG+ G + + CHH PE+Y GI E + +++ FF RR Sbjct: 88 IARLYYGAADPKSGGVAQGARVFAHPQCHHVPEVYDGIGEAEAAALLRGFFAARR 142 >gi|89100955|ref|ZP_01173801.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus sp. NRRL B-14911] gi|89084326|gb|EAR63481.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus sp. NRRL B-14911] Length = 180 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/140 (42%), Positives = 84/140 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+EEA+ A E+P+GAV VL+ KIISRA N ++ AHAE+LAI C +L Sbjct: 15 YMKEAIEEAKKAGELGEVPIGAVVVLDGKIISRAHNLRESNQNAVAHAELLAIEEACGML 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MC+ AI L+RI+R+ YGA++PKGG +H Sbjct: 75 GTWRLEDAALYVTLEPCAMCSGAIILSRIKRVVYGAADPKGGCAGTFMNLLQDERFNHQS 134 Query: 127 EIYPGISEQRSRQIIQDFFK 146 E+ G+ E+ ++ DFF+ Sbjct: 135 EVSAGVLEEECGSLLTDFFR 154 >gi|218283248|ref|ZP_03489309.1| hypothetical protein EUBIFOR_01897 [Eubacterium biforme DSM 3989] gi|218216003|gb|EEC89541.1| hypothetical protein EUBIFOR_01897 [Eubacterium biforme DSM 3989] Length = 158 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 89/143 (62%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+++A+ A +E+P+G V V ++KII+R N+ L+ AHAEI+AI+ C+ L Sbjct: 8 WMKEAIKQAKKAESYDEVPIGCVIVKDDKIIARGYNKRETLQQSIAHAEIMAIQKACKKL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI +RI+ + YGAS+PKGG + T + ++ +H P Sbjct: 68 GTWRLEDCVLYVTLEPCPMCAGAIIQSRIKEVVYGASDPKGGCVGTCTNLFEVSEFNHHP 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 GI E +++ FFK++R Sbjct: 128 IYRRGILESDCSDLLKHFFKKKR 150 >gi|78043781|ref|YP_361468.1| cytidine/deoxycytidylate deaminase family protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995896|gb|ABB14795.1| cytidine/deoxycytidylate deaminase family protein [Carboxydothermus hydrogenoformans Z-2901] Length = 153 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ AL+EA+ AAL+ E+PVGAV V N +II R N D TAHAEI+A++ L Sbjct: 6 FMAEALKEAEKAALQGEVPVGAVVVYNGEIIGRGHNLRETFSDPTAHAEIVALKEAASKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVT+EPC MCA AI ARI+ L YGA + K G ++ +H Sbjct: 66 KNWQLKDCTLYVTVEPCPMCAGAIYQARIKTLVYGAPDLKAGAVDTLFDLVRNPRLNHRV 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + +II DFF+E+R Sbjct: 126 EVISGVLAAEASKIITDFFREKR 148 >gi|326403669|ref|YP_004283751.1| tRNA-specific adenosine deaminase [Acidiphilium multivorum AIU301] gi|325050531|dbj|BAJ80869.1| tRNA-specific adenosine deaminase [Acidiphilium multivorum AIU301] Length = 154 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/130 (43%), Positives = 84/130 (64%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+PVGAV V +++ AGN D TAHAEILA+R + + L L+VT Sbjct: 17 RGEVPVGAVVVDAGGSVLAAAGNEVEARGDPTAHAEILALRAAAQRRGGKFLQGCRLFVT 76 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC +CAAAISL RI RL +GA +PK GG+E+G + ++ TCH+ PE+ G+ + + + Sbjct: 77 LEPCPLCAAAISLFRIDRLVFGAYDPKSGGVEHGPRVFSHPTCHYRPEVVGGVDQTAAAE 136 Query: 140 IIQDFFKERR 149 +++ FF ++R Sbjct: 137 LLRHFFSQKR 146 >gi|229009532|ref|ZP_04166761.1| hypothetical protein bmyco0001_110 [Bacillus mycoides DSM 2048] gi|229131029|ref|ZP_04259944.1| hypothetical protein bcere0014_100 [Bacillus cereus BDRD-ST196] gi|228652424|gb|EEL08346.1| hypothetical protein bcere0014_100 [Bacillus cereus BDRD-ST196] gi|228751743|gb|EEM01540.1| hypothetical protein bmyco0001_110 [Bacillus mycoides DSM 2048] Length = 164 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 63/149 (42%), Positives = 87/149 (58%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI Sbjct: 1 MERDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + LYVTLEPC MCA I L+RI+R+ YGAS+PKGG T Sbjct: 61 EACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRIKRVVYGASDPKGGCAGTLMNLLTDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ PG+ E+ ++ FF+E R Sbjct: 121 RFNHQCEVVPGVLEEECGTLLTIFFRELR 149 >gi|281421269|ref|ZP_06252268.1| tRNA-specific adenosine deaminase [Prevotella copri DSM 18205] gi|281404804|gb|EFB35484.1| tRNA-specific adenosine deaminase [Prevotella copri DSM 18205] Length = 148 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 65/148 (43%), Positives = 85/148 (57%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 KK +M AL EAQ A +EIPVGA+ V ++IISRA N L DVTAHAE+ AI Sbjct: 6 KKDEAYMRRALMEAQAAFDEDEIPVGAIIVCKDRIISRAHNLTEMLTDVTAHAEMQAITS 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G +L + L + LYVT+EPC MCA A+ A+I R+ YGAS+ K G Y Sbjct: 66 GANMLGGKYLKDCTLYVTVEPCVMCAGALGWAQISRVVYGASDEK-----RGYTKYAPDA 120 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E R ++QDFF+ +R Sbjct: 121 LHPKTTVTSGVLEDECRALMQDFFQRKR 148 >gi|255994527|ref|ZP_05427662.1| tRNA-specific adenosine deaminase [Eubacterium saphenum ATCC 49989] gi|255993240|gb|EEU03329.1| tRNA-specific adenosine deaminase [Eubacterium saphenum ATCC 49989] Length = 151 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 64/143 (44%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A + E+PVGAV V N K+IS+A N R+ K+ AHAEILAI C+ L Sbjct: 5 FMRVALEEAKKAYKQGEVPVGAVIVKNGKVISKAHNETRQKKNAVAHAEILAIDKACKKL 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L + ++YVTLEPC MCA AI ARI + G + K G +H Sbjct: 65 ENERLVDTEMYVTLEPCAMCAGAIVQARIPEVMIGTRDLKSGAANTILNVLENEKLNHRA 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI E+ +I++ FFKE R Sbjct: 125 ELRFGIFEEECSEILKTFFKELR 147 >gi|148260476|ref|YP_001234603.1| CMP/dCMP deaminase, zinc-binding [Acidiphilium cryptum JF-5] gi|146402157|gb|ABQ30684.1| tRNA-adenosine deaminase [Acidiphilium cryptum JF-5] Length = 151 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/130 (43%), Positives = 84/130 (64%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+PVGAV V +++ AGN D TAHAEILA+R + + L L+VT Sbjct: 14 RGEVPVGAVVVDAGGSVLAAAGNEVEARGDPTAHAEILALRAAAQRRGGKFLQGCRLFVT 73 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC +CAAAISL RI RL +GA +PK GG+E+G + ++ TCH+ PE+ G+ + + + Sbjct: 74 LEPCPLCAAAISLFRIDRLVFGAYDPKSGGVEHGPRVFSHPTCHYRPEVVGGVDQTAAAE 133 Query: 140 IIQDFFKERR 149 +++ FF ++R Sbjct: 134 LLRHFFSQKR 143 >gi|83859467|ref|ZP_00952988.1| cytidine and deoxycytidylate deaminase family protein [Oceanicaulis alexandrii HTCC2633] gi|83852914|gb|EAP90767.1| cytidine and deoxycytidylate deaminase family protein [Oceanicaulis alexandrii HTCC2633] Length = 164 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/129 (46%), Positives = 82/129 (63%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E PVGAV V + II+ AGN D T HAEI A+R+ + L L ++LYVTL Sbjct: 32 ETPVGAVIVDPQTDNIIAEAGNAPISDCDPTGHAEIRALRLAAQKLGNYRLTGLELYVTL 91 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA AIS ARI ++ YGAS+PKGG +++G QF+ TCH PE+ G+ + ++ Sbjct: 92 EPCAMCAGAISHARIGKVIYGASDPKGGAVDHGPQFFAQPTCHWRPEVQGGVLADEASEM 151 Query: 141 IQDFFKERR 149 ++ FF+ RR Sbjct: 152 LKAFFRARR 160 >gi|229165011|ref|ZP_04292809.1| hypothetical protein bcere0007_110 [Bacillus cereus AH621] gi|228618463|gb|EEK75490.1| hypothetical protein bcere0007_110 [Bacillus cereus AH621] Length = 164 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 63/149 (42%), Positives = 87/149 (58%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI Sbjct: 1 MERDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + LYVTLEPC MCA I L+RI+R+ YGAS+PKGG T Sbjct: 61 EACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRIKRVIYGASDPKGGCAGTLMNLLTDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ PG+ E+ ++ FF+E R Sbjct: 121 RFNHQCEVVPGVLEEECGTLLTIFFRELR 149 >gi|126461710|ref|YP_001042824.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides ATCC 17029] gi|126103374|gb|ABN76052.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides ATCC 17029] Length = 150 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 65/115 (56%), Positives = 80/115 (69%), Gaps = 1/115 (0%) Query: 35 KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 ++++RAGNR REL D TAHAE+LAIR C L E L DLYVTLEPC MCAAAIS AR Sbjct: 35 QVVARAGNRCRELSDPTAHAEMLAIRAACATLG-ERLTGCDLYVTLEPCPMCAAAISAAR 93 Query: 95 IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 I RLYYGA++PK GG+ G + + CHH PE+Y GI E + +++ FF RR Sbjct: 94 IARLYYGAADPKSGGVAQGARVFAHPQCHHVPEVYDGIGEAEAAALLRGFFAARR 148 >gi|152973870|ref|YP_001373387.1| CMP/dCMP deaminase zinc-binding [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152022622|gb|ABS20392.1| CMP/dCMP deaminase zinc-binding [Bacillus cytotoxicus NVH 391-98] Length = 164 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 62/149 (41%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ FM A+EEA+ A E+P+GAV VL+ K+IS A N + AHAE+LAI Sbjct: 1 MEQDMYFMKLAIEEAKKAEKIEEVPIGAVLVLDGKVISSAHNLRETEQRSIAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 KACKALGTWRLEHATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ FF+E R Sbjct: 121 RFNHQCEVVSGVMEEECGALLTSFFRELR 149 >gi|260893961|ref|YP_003240058.1| CMP/dCMP deaminase zinc-binding protein [Ammonifex degensii KC4] gi|260866102|gb|ACX53208.1| CMP/dCMP deaminase zinc-binding protein [Ammonifex degensii KC4] Length = 151 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 62/142 (43%), Positives = 84/142 (59%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EA+ A +R E+PVGAVAVLN +II R N LKD TAHAEILA+R + + Sbjct: 1 MREALSEAEKAYVRGEVPVGAVAVLNGEIIGRGHNLRETLKDATAHAEILALREAAKKIG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L EV LY TLEPC MCA A+ R++R+ +GA +PK G + +H E Sbjct: 61 DWRLEEVTLYTTLEPCPMCAGALIQFRVKRVVFGAFDPKAGAAGSVVDLLRDPRFNHQVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ + S +++ FF+E R Sbjct: 121 VVGGVLAEESGALLKRFFQELR 142 >gi|87121678|ref|ZP_01077565.1| cytidine/deoxycytidylate deaminase family protein [Marinomonas sp. MED121] gi|86162929|gb|EAQ64207.1| cytidine/deoxycytidylate deaminase family protein [Marinomonas sp. MED121] Length = 162 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/142 (45%), Positives = 85/142 (59%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A AA E+PVGA+ VL+N+II N D TAHAEI AIR C+ ++ Sbjct: 1 MERALVLADKAATEGEVPVGAILVLDNEIIGEGYNSPISTCDPTAHAEIQAIRDACKNVA 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 LP+ LYVTLEPC+MCA AI ARI R+ Y A+ PK G +E+ QF+ +HS + Sbjct: 61 NYRLPKATLYVTLEPCSMCAGAIVHARIARVVYAATEPKSGVVESQNQFFEQDFLNHSVK 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ + Q + DFF+ RR Sbjct: 121 VEAGVLGPFASQKLSDFFQYRR 142 >gi|184154758|ref|YP_001843098.1| cytosine/adenosine deaminase [Lactobacillus fermentum IFO 3956] gi|227514025|ref|ZP_03944074.1| nucleoside deaminase [Lactobacillus fermentum ATCC 14931] gi|260663213|ref|ZP_05864105.1| cytosine/adenosine deaminase [Lactobacillus fermentum 28-3-CHN] gi|183226102|dbj|BAG26618.1| cytosine/adenosine deaminase [Lactobacillus fermentum IFO 3956] gi|227087611|gb|EEI22923.1| nucleoside deaminase [Lactobacillus fermentum ATCC 14931] gi|260552405|gb|EEX25456.1| cytosine/adenosine deaminase [Lactobacillus fermentum 28-3-CHN] Length = 174 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 55/140 (39%), Positives = 84/140 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A +EA AAL E+P+GAV V KII R N + +D T HAE+LAI C+ L Sbjct: 10 YMKEAFKEANQAALLGEVPIGAVVVYKGKIIGRGHNMREKFQDATYHAEVLAIMEACQAL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E DLYVTLEPC MC+ AI +RI+R+++ A + K G + + +H Sbjct: 70 GSWRLEECDLYVTLEPCIMCSGAIINSRIKRVFFAAPDEKAGAVSSLYHLLEDTRLNHQV 129 Query: 127 EIYPGISEQRSRQIIQDFFK 146 E++ G+ ++ + Q++++FF+ Sbjct: 130 EVHQGLMQEEASQMLKEFFR 149 >gi|121533374|ref|ZP_01665202.1| CMP/dCMP deaminase, zinc-binding [Thermosinus carboxydivorans Nor1] gi|121307933|gb|EAX48847.1| CMP/dCMP deaminase, zinc-binding [Thermosinus carboxydivorans Nor1] Length = 149 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 87/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALEEA+ A E+P+GAV V++ ++++A NR D TAHAEI+ I+ C++L Sbjct: 6 YMGIALEEARKAYAIGEVPIGAVLVMDGAVVAKAHNRRETWHDATAHAEIIVIQQACKLL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVT+EPC MCA A+ +RI RL YG+++ K G +E+ +H Sbjct: 66 GRWRLTGAALYVTIEPCPMCAGALVNSRIDRLVYGSADYKAGAVESLFNIVQHPALNHRL 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ +I++DFF++RR Sbjct: 126 EVTAGVRADECAEIMRDFFRQRR 148 >gi|332686456|ref|YP_004456230.1| tRNA-specific adenosine-34 deaminase [Melissococcus plutonius ATCC 35311] gi|332370465|dbj|BAK21421.1| tRNA-specific adenosine-34 deaminase [Melissococcus plutonius ATCC 35311] Length = 163 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 65/145 (44%), Positives = 88/145 (60%), Gaps = 4/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ AL EA+ A E+P+GAV V +II+R N +++ TAHAEILAI C L Sbjct: 12 FMNEALTEAKKAEKLGEVPIGAVVVYQKQIIARGYNLREKIQKATAHAEILAINEACTFL 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC--HH 124 + L E L+VTLEPC+MC+ A+ LARI +YYGA +PKGG GT LA +H Sbjct: 72 NSWRLEETRLFVTLEPCSMCSGAMLLARIPEVYYGAKDPKGGAA--GTLINLLADSRFNH 129 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ QI+ +FFK+ R Sbjct: 130 VAKTESGVLEEPCSQILTNFFKQLR 154 >gi|319941641|ref|ZP_08015965.1| cytosine deaminase [Sutterella wadsworthensis 3_1_45B] gi|319804871|gb|EFW01725.1| cytosine deaminase [Sutterella wadsworthensis 3_1_45B] Length = 328 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/143 (44%), Positives = 85/143 (59%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEAQ A + EIPVGAV V + K+I+R GN D TAHAEI+A+R L Sbjct: 166 FMRMALEEAQEAGMAGEIPVGAVVVADGKVIARGGNETLRSGDPTAHAEIVALRAAAAAL 225 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVTLEPC MCA AI+ AR RR+ YGA + + G +E + + + +H P Sbjct: 226 ANHRLTNTTLYVTLEPCPMCAGAIAEARCRRIVYGAGDSRRGALEGAFRLFDIPGVNHRP 285 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ +++ DFF +RR Sbjct: 286 LVTGGVLALEGEKLLTDFFAKRR 308 >gi|189501687|ref|YP_001957404.1| hypothetical protein Aasi_0231 [Candidatus Amoebophilus asiaticus 5a2] gi|189497128|gb|ACE05675.1| hypothetical protein Aasi_0231 [Candidatus Amoebophilus asiaticus 5a2] Length = 155 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/143 (44%), Positives = 88/143 (61%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA A NEIPVGAV V NN+II++A N+ +LKD TAHAE+LA+ + Sbjct: 17 FMRIALQEAMKAYEVNEIPVGAVVVSNNRIIAKAHNQVEKLKDATAHAEMLALSSAFSYI 76 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + LP+ LYVTLEPC MCA+A +++ R+ + AS+ + G GT H Sbjct: 77 GGKYLPDCTLYVTLEPCLMCASATFWSKLSRIVFSASDIRLGYRTFGTN-----VLHPKT 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I GI EQ S++++Q FF + R Sbjct: 132 KIDAGILEQESQKVLQSFFAKLR 154 >gi|312142718|ref|YP_003994164.1| CMP/dCMP deaminase zinc-binding protein [Halanaerobium sp. 'sapolanicus'] gi|311903369|gb|ADQ13810.1| CMP/dCMP deaminase zinc-binding protein [Halanaerobium sp. 'sapolanicus'] Length = 149 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 89/143 (62%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA+ A R E+P+GAV V +++++ R N + +D T+HAEI+A++ + Sbjct: 7 YMQMALAEARKAYQRAEVPIGAVVVCDDRVVGRGFNLREQTQDPTSHAEIIALKEAAKEQ 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC MCA AI +RI+RL Y A++PK G +++ Q +H Sbjct: 67 ASWRLEDCQLYVTLEPCPMCAGAILQSRIKRLVYAAADPKAGAVKSLYQLLGDDRFNHQV 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E + Q+++DFF+E R Sbjct: 127 EVVSGVMEAEAAQLLKDFFRELR 149 >gi|323344759|ref|ZP_08084983.1| tRNA-specific adenosine deaminase [Prevotella oralis ATCC 33269] gi|323094029|gb|EFZ36606.1| tRNA-specific adenosine deaminase [Prevotella oralis ATCC 33269] Length = 151 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 66/148 (44%), Positives = 85/148 (57%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +K FM AL EA+ A EIP+GAV V ++II+RA N L DVTAHAE+ AI Sbjct: 9 QKDEQFMQKALIEAKAAFDAGEIPIGAVIVCKDRIIARAHNLTETLHDVTAHAEMQAITA 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + LPE LYVT+EPCTMCA AI A++RR+ YGA++ K G Y Sbjct: 69 AADALGGKYLPECTLYVTIEPCTMCAGAIGWAQLRRIVYGATDEK-----RGFHKYAPEA 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H I GI EQ R++++ FF +R Sbjct: 124 LHPKATITAGILEQECRELMRQFFLSKR 151 >gi|330718918|ref|ZP_08313518.1| cytosine/adenosine deaminase [Leuconostoc fallax KCTC 3537] Length = 169 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/148 (43%), Positives = 88/148 (59%), Gaps = 6/148 (4%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM AL+EA+ A E+P+GAV V +N+II+RA N + + TAHAE+LAI + Sbjct: 13 NDFMQAALDEARQAGSEGEVPIGAVIVHDNQIIARAHNHREQGQQATAHAELLAIEAANQ 72 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--- 121 L L+VTLEPC MCA AI +RI +YYGA + KGG +++ YTL Sbjct: 73 AAQSWRLENTALFVTLEPCMMCAGAIINSRIPVIYYGAQDAKGGAVKS---LYTLLEDER 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E++PGI Q++Q+FF E R Sbjct: 130 LNHRVEVHPGIKSDECGQLLQNFFSEIR 157 >gi|257454187|ref|ZP_05619457.1| tRNA-specific adenosine deaminase [Enhydrobacter aerosaccus SK60] gi|257448360|gb|EEV23333.1| tRNA-specific adenosine deaminase [Enhydrobacter aerosaccus SK60] Length = 187 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 62/146 (42%), Positives = 86/146 (58%), Gaps = 1/146 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL+ A R E+PVGAV V II++ N+ D TAHAEI+AIR C+ Sbjct: 28 DAFMQAALDVAAEGGERGEVPVGAVIVHQGTIIAKGYNQPILSHDATAHAEIVAIRQACQ 87 Query: 65 ILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 LP + +L+VTLEPCTMC AI AR+ RL + A+ PK G I + F +A + Sbjct: 88 YFDNYRLPADCELFVTLEPCTMCLGAIIHARVSRLVFAATEPKAGMIVSQQDFSQVAFYN 147 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ ++SR ++QDFF+ RR Sbjct: 148 HFLTVKQGVMAEQSRALLQDFFRHRR 173 >gi|83955334|ref|ZP_00963989.1| cytidine and deoxycytidylate deaminase family protein [Sulfitobacter sp. NAS-14.1] gi|83840327|gb|EAP79501.1| cytidine and deoxycytidylate deaminase family protein [Sulfitobacter sp. NAS-14.1] Length = 151 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 79/144 (54%), Positives = 103/144 (71%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +MS ALEEA+ AA R E+PVGAV V + +++++AGNR REL D TAHAE+LAIR C Sbjct: 6 YMSQALEEARAAAARGEVPVGAVIVAPDGQVVAQAGNRTRELNDPTAHAEVLAIRAACAA 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 E L LYVTLEPC MCAAAIS AR+ RLYYGAS+PK GG+ G + ++ A CHH+ Sbjct: 66 AGSERLGGHALYVTLEPCAMCAAAISAARVARLYYGASDPKSGGVAQGARVFSHAQCHHA 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P++Y I+ S Q+++ FF E+R Sbjct: 126 PDVYDAIAAPESEQLLRAFFAEKR 149 >gi|229159196|ref|ZP_04287222.1| hypothetical protein bcere0009_110 [Bacillus cereus R309803] gi|228624277|gb|EEK81077.1| hypothetical protein bcere0009_110 [Bacillus cereus R309803] Length = 166 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEAQ A E+P+GAV VL+ ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAQKAEEIQEVPIGAVIVLDGEVISSAHNLRETEQRSIAHAELLAIDEACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVTGVLEEECGTLLTNFFRELR 151 >gi|292670885|ref|ZP_06604311.1| deaminase [Selenomonas noxia ATCC 43541] gi|292647506|gb|EFF65478.1| deaminase [Selenomonas noxia ATCC 43541] Length = 179 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 63/143 (44%), Positives = 86/143 (60%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALEEA++A E+P+GAV + +I+R N D TAHAE++AIR C+ L Sbjct: 33 MRMALEEAKHAYALGEVPIGAVIIDKAGTLIARGCNLRETQHDATAHAELIAIRRACKSL 92 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L E+ LYVT+EPC MCA AI ++RI R+ YG+++ K GG E+ + +H P Sbjct: 93 GRWRLTEMTLYVTIEPCPMCAGAIVMSRISRIVYGSTDRKAGGCESLFNITSCPGLNHQP 152 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI II+ FFKERR Sbjct: 153 EICAGILADECSAIIKKFFKERR 175 >gi|293400048|ref|ZP_06644194.1| cytidine/deoxycytidylate deaminase family protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306448|gb|EFE47691.1| cytidine/deoxycytidylate deaminase family protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 157 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 87/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA+ A +E+P+G V V NKII+RA N + AHAEILAI C I+ Sbjct: 5 FMLEAIKEAEKAFAIDEVPIGCVIVYQNKIIARAHNLRESKQSAIAHAEILAIEKACNII 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MC+ AI +R++ + +GA +PKGG I++ + Y +H P Sbjct: 65 GSWRLEDCTLYVTLEPCPMCSGAIIQSRMKTVVFGAYDPKGGCIKSCMKMYETPGFNHYP 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E GI E+ +++ FF+++R Sbjct: 125 ETIGGILEEECGALLKQFFRQKR 147 >gi|89892755|ref|YP_516242.1| hypothetical protein DSY0009 [Desulfitobacterium hafniense Y51] gi|219666080|ref|YP_002456515.1| CMP/dCMP deaminase zinc-binding [Desulfitobacterium hafniense DCB-2] gi|89332203|dbj|BAE81798.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219536340|gb|ACL18079.1| CMP/dCMP deaminase zinc-binding [Desulfitobacterium hafniense DCB-2] Length = 148 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 89/143 (62%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALEEA+ A + E+P+GAV V +II+RA N +D TAHAE+LA++ + L Sbjct: 6 YMRLALEEAEIAFAQGEVPIGAVVVHKGEIIARAHNEKELRQDPTAHAEVLAVQRATQAL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LYVTLEPC MCA ++ AR++ L +GA++ KGG + + T + +H Sbjct: 66 GIWRLSEATLYVTLEPCPMCAGSLVQARLKTLVFGAADLKGGAVGSVTNVLDVNRWNHRV 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI E+ QI++DFF++ R Sbjct: 126 EVVAGILEEECAQILKDFFRKLR 148 >gi|86140825|ref|ZP_01059384.1| putative cytosine/adenosine deaminase [Leeuwenhoekiella blandensis MED217] gi|85832767|gb|EAQ51216.1| putative cytosine/adenosine deaminase [Leeuwenhoekiella blandensis MED217] Length = 151 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 63/145 (43%), Positives = 86/145 (59%), Gaps = 6/145 (4%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL+EA+ A EIPVGAV +NN+II+RA N L DVTAHAE+ AI Sbjct: 10 HYFMKKALQEAETAFELGEIPVGAVVTVNNRIIARAHNLTERLHDVTAHAEMQAITAAAN 69 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + L + LYVTLEPC MCA A+ ++I R+ +GA++ G + GTQ H Sbjct: 70 FLGGKYLTDSTLYVTLEPCQMCAGALYWSQISRIVFGAADTTRGYQKMGTQL------HP 123 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ GI E + Q+++ FF ERR Sbjct: 124 KTQVTSGIMETEAAQLLKRFFIERR 148 >gi|227545162|ref|ZP_03975211.1| tRNA-adenosine deaminase [Lactobacillus reuteri CF48-3A] gi|300909163|ref|ZP_07126624.1| tRNA-specific adenosine deaminase [Lactobacillus reuteri SD2112] gi|227184845|gb|EEI64916.1| tRNA-adenosine deaminase [Lactobacillus reuteri CF48-3A] gi|300893028|gb|EFK86387.1| tRNA-specific adenosine deaminase [Lactobacillus reuteri SD2112] Length = 170 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 55/139 (39%), Positives = 84/139 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA+ A + +E+P+GA+ V ++I R N + +DVT HAE+LAI C L Sbjct: 14 FMKMAIAEAKQARILDEVPIGAIVVHEGQVIGRGHNMREKFQDVTYHAEMLAIMEACTNL 73 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + DLYVTLEPC MC+ AI ARI+ +YYGA++PK G +++ + +H Sbjct: 74 GSWRLEDCDLYVTLEPCIMCSGAIINARIKNVYYGAADPKAGAVDSLYHLLNDSRLNHQV 133 Query: 127 EIYPGISEQRSRQIIQDFF 145 ++ GI Q++++FF Sbjct: 134 NVHSGILGDECSQMLKNFF 152 >gi|229015424|ref|ZP_04172427.1| hypothetical protein bcere0030_220 [Bacillus cereus AH1273] gi|229021629|ref|ZP_04178217.1| hypothetical protein bcere0029_110 [Bacillus cereus AH1272] gi|228739675|gb|EEL90083.1| hypothetical protein bcere0029_110 [Bacillus cereus AH1272] gi|228745866|gb|EEL95865.1| hypothetical protein bcere0030_220 [Bacillus cereus AH1273] Length = 164 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 61/149 (40%), Positives = 87/149 (58%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM A+EEA+ A E+P+GAV VL++++IS A N + AHAE+LAI Sbjct: 1 MDRDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDDEVISVAHNLRETEQRSIAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 EACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 RFNHQCEVVAGVLEEECGTLLTNFFRELR 149 >gi|333029805|ref|ZP_08457866.1| CMP/dCMP deaminase zinc-binding [Bacteroides coprosuis DSM 18011] gi|332740402|gb|EGJ70884.1| CMP/dCMP deaminase zinc-binding [Bacteroides coprosuis DSM 18011] Length = 145 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 85/143 (59%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA++A EIPVGAV V + ++I+RA N L DVTAHAE+ AI M +L Sbjct: 8 FMKMALQEAESAMKMGEIPVGAVVVSHGQVIARAHNMTERLTDVTAHAEMQAITMAADLL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC MCA AIS A++ +L GA++ K G + H Sbjct: 68 GGKYLSDCTLYVTLEPCVMCAGAISWAQLGKLVIGANDSK-----RGYKLLAPDVLHPKT 122 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ +S +++Q FF+ RR Sbjct: 123 EVIEGVLADKSTEMLQSFFRARR 145 >gi|89889508|ref|ZP_01201019.1| cytosine/adenosine deaminase [Flavobacteria bacterium BBFL7] gi|89517781|gb|EAS20437.1| cytosine/adenosine deaminase [Flavobacteria bacterium BBFL7] Length = 149 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 64/143 (44%), Positives = 82/143 (57%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EAQ A R EIPVGAV V N+II++ N L DVTAHAE+ AI G L Sbjct: 10 FMKKALQEAQTALDRGEIPVGAVIVTQNRIIAKGHNLTETLTDVTAHAEMQAITAGASFL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC MCA A+ ++I + YGA + G ++ GTQ H Sbjct: 70 GGKYLKDCTLYVTLEPCQMCAGALYWSQISNIVYGARDEHRGYLKMGTQL------HPKT 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI E+ II +FF RR Sbjct: 124 KVVSGILEEECSAIINEFFTRRR 146 >gi|85857921|ref|YP_460123.1| tRNA-specific adenosine deaminase [Syntrophus aciditrophicus SB] gi|85721012|gb|ABC75955.1| tRNA-specific adenosine deaminase [Syntrophus aciditrophicus SB] Length = 187 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 88/143 (61%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALEEA+ AA E+P+GAV V N++I+R+ N + D TAHAEILAIR + Sbjct: 31 WMRLALEEARLAASEGEVPIGAVIVRENEVIARSHNMPVDRHDPTAHAEILAIREAAEKM 90 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI AR++RL YG +PKGG +++ + + +H Sbjct: 91 KNYRLTGMTLYVTLEPCIMCAGAILQARLKRLVYGTGDPKGGAVDSLYRLLQDSRLNHFV 150 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + +I+ FF+E+R Sbjct: 151 EVTGGVLQASCAEILSGFFREKR 173 >gi|288926032|ref|ZP_06419961.1| cytidine/deoxycytidylate deaminase family protein [Prevotella buccae D17] gi|288337252|gb|EFC75609.1| cytidine/deoxycytidylate deaminase family protein [Prevotella buccae D17] Length = 147 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 85/143 (59%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+EA+ A + EIP+GAV V +IISRA N L DVTAHAE+ AI +L Sbjct: 10 YMRKALQEAEAACQKGEIPIGAVVVCKGRIISRAHNLTETLHDVTAHAEMQAITAAADLL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVT+EPCTMCA AI A++ R+ YGA + K G + Y H Sbjct: 70 GGKYLTDCTLYVTVEPCTMCAGAIGWAQVPRIVYGAPDEK-----RGYRHYAPHAMHPKA 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I GI E R+++Q FF+++R Sbjct: 125 DIVGGILEDECRELMQKFFRDKR 147 >gi|163733416|ref|ZP_02140859.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter litoralis Och 149] gi|161393204|gb|EDQ17530.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter litoralis Och 149] Length = 149 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 69/130 (53%), Positives = 88/130 (67%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+PVGAV V + II+ AGN+ R D TAHAE+LAIR C +L E L + LYVT Sbjct: 20 RGEVPVGAVVVDPDGLIIAAAGNQTRADLDPTAHAEMLAIRRACAVLGTERLIDHALYVT 79 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCAAAIS ARI RLYYGA +PK GG+ G + ++ CHH+PE++ GI+ S Sbjct: 80 LEPCAMCAAAISAARISRLYYGAGDPKSGGVAQGARVFSHPQCHHAPEVFDGIAAAESEA 139 Query: 140 IIQDFFKERR 149 +++ FF RR Sbjct: 140 MLKGFFTARR 149 >gi|229027869|ref|ZP_04184026.1| Uncharacterized deaminase yaaJ [Bacillus cereus AH1271] gi|228733445|gb|EEL84270.1| Uncharacterized deaminase yaaJ [Bacillus cereus AH1271] Length = 166 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VLN ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVAGVLEKECGTLLTNFFRELR 151 >gi|206978348|ref|ZP_03239222.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus H3081.97] gi|217957598|ref|YP_002336140.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus AH187] gi|222093791|ref|YP_002527839.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus Q1] gi|228983277|ref|ZP_04143492.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229136865|ref|ZP_04265494.1| Uncharacterized deaminase yaaJ [Bacillus cereus BDRD-ST26] gi|229153801|ref|ZP_04281933.1| Uncharacterized deaminase yaaJ [Bacillus cereus ATCC 4342] gi|206743440|gb|EDZ54873.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus H3081.97] gi|217065488|gb|ACJ79738.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus AH187] gi|221237837|gb|ACM10547.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus Q1] gi|228629670|gb|EEK86365.1| Uncharacterized deaminase yaaJ [Bacillus cereus ATCC 4342] gi|228646600|gb|EEL02805.1| Uncharacterized deaminase yaaJ [Bacillus cereus BDRD-ST26] gi|228776457|gb|EEM24808.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 166 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VLN ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVAGVLEEECGTLLTNFFRELR 151 >gi|299542082|ref|ZP_07052398.1| hypothetical protein BFZC1_24048 [Lysinibacillus fusiformis ZC1] gi|298725397|gb|EFI66045.1| hypothetical protein BFZC1_24048 [Lysinibacillus fusiformis ZC1] Length = 171 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 61/144 (42%), Positives = 84/144 (58%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FM ALEEAQ AAL E+P+GAV V KII+RA N ++ T HAE+L I+ C+ Sbjct: 9 LFMKQALEEAQQAALLGEVPIGAVLVYEGKIIARAHNLRETTQNATTHAELLVIQEACKK 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L + LYVTLEPC MCA AI +R+ R+ YGA + K G +++ +H Sbjct: 69 IGSWRLEDTTLYVTLEPCPMCAGAILQSRVPRVVYGARDQKAGCVDSLYHLLNDERFNHD 128 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 ++ GI + QI+ DFFK R Sbjct: 129 CDVTEGILAEECGQILTDFFKALR 152 >gi|329889978|ref|ZP_08268321.1| tRNA-specific adenosine deaminase [Brevundimonas diminuta ATCC 11568] gi|328845279|gb|EGF94843.1| tRNA-specific adenosine deaminase [Brevundimonas diminuta ATCC 11568] Length = 154 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 61/141 (43%), Positives = 85/141 (60%), Gaps = 2/141 (1%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 AL+ AQ AA E+PVGAV V N +++ R N D +AHAEI+A+R L Sbjct: 2 ALDLAQAAAEAGEVPVGAVIVDENTGEVLGRGQNGPITAHDPSAHAEIVALRDAAAKLQN 61 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 L ++ LYVTLEPC MCA AIS ARI R+ +GA +PKGG + +G +F+ TCH P Sbjct: 62 YRLTDLTLYVTLEPCAMCAGAISHARIGRVVWGADDPKGGAVLHGGRFFDQPTCHWRPRT 121 Query: 129 YPGISEQRSRQIIQDFFKERR 149 G+ + ++++ FF+ RR Sbjct: 122 ESGVMADPAAEMLRSFFRSRR 142 >gi|225011298|ref|ZP_03701754.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-3C] gi|225004554|gb|EEG42520.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-3C] Length = 166 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 9/152 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA +A + E+PVGA+ V N++II+R N +L DVTAHAE+ AI L Sbjct: 15 FMKLALAEAAHAFEKGEVPVGALVVANDRIIARGHNLTEQLTDVTAHAEMQAITAAAHHL 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF---------Y 117 + L LYVTLEPC MCA A+ ++I ++ YGAS+PK GG+ +Q + Sbjct: 75 GGKYLHNCTLYVTLEPCLMCAGALYWSQISKVVYGASDPKRGGLSVYSQHQASLSVPQSH 134 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + H E+ G+ + Q++QDFF ++R Sbjct: 135 PPSPLHPKTEVIGGVMATEATQLLQDFFAKKR 166 >gi|315606353|ref|ZP_07881369.1| tRNA-specific adenosine deaminase [Prevotella buccae ATCC 33574] gi|315252044|gb|EFU32017.1| tRNA-specific adenosine deaminase [Prevotella buccae ATCC 33574] Length = 147 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 85/143 (59%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+EA+ A + EIP+GAV V +IISRA N L DVTAHAE+ AI +L Sbjct: 10 YMRKALQEAEAACQKGEIPIGAVVVCKGRIISRAHNLTETLHDVTAHAEMQAITAAADLL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVT+EPCTMCA AI A++ R+ YGA + K G + Y H Sbjct: 70 GGKYLTDCTLYVTVEPCTMCAGAIGWAQVPRIVYGAPDEK-----RGYRHYAPHAMHPRA 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I GI E R+++Q FF+++R Sbjct: 125 DIVGGILEDECRELMQKFFRDKR 147 >gi|254293360|ref|YP_003059383.1| CMP/dCMP deaminase zinc-binding [Hirschia baltica ATCC 49814] gi|254041891|gb|ACT58686.1| CMP/dCMP deaminase zinc-binding [Hirschia baltica ATCC 49814] Length = 154 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 62/146 (42%), Positives = 89/146 (60%), Gaps = 3/146 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M+ A++ A+ AAL E+PVGAV V I+ N D TAHAEI+AIR C Sbjct: 9 YMARAMQLAEEAALAGEVPVGAVIVDPSTGNIVGEGRNGPIGAHDPTAHAEIVAIRNACA 68 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + LP+++LYVTLEPC MCA AIS ARI ++ + A +PKGG I++G +F+ +TCH Sbjct: 69 SVDNYRLPDLELYVTLEPCAMCAGAISFARIGKVVFAADDPKGGAIKHGPKFFEQSTCHW 128 Query: 125 SPEIYPGIS-EQRSRQIIQDFFKERR 149 + I + ++++ FFK RR Sbjct: 129 RSQWEQDIRFASEAGEMLRAFFKSRR 154 >gi|323701686|ref|ZP_08113358.1| CMP/dCMP deaminase zinc-binding protein [Desulfotomaculum nigrificans DSM 574] gi|323533459|gb|EGB23326.1| CMP/dCMP deaminase zinc-binding protein [Desulfotomaculum nigrificans DSM 574] Length = 144 Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 62/142 (43%), Positives = 80/142 (56%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ AA + E+P+GAV V I+ R + L D +AHAEILA+R + L Sbjct: 1 MREALVEAQKAAEKGEVPIGAVVVAEGAIVGRGHDLRESLCDASAHAEILAMREAAKQLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L LYVT+EPC MCA AI R+RRL YGA NPK G +++ +H E Sbjct: 61 DWRLNHATLYVTVEPCAMCAGAIVQFRVRRLVYGAPNPKAGSVDSILDIVHQPRFNHRVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + GI E R +IQ+FF+ R Sbjct: 121 VISGIMEDECRAVIQNFFRSLR 142 >gi|125624632|ref|YP_001033115.1| hypothetical protein llmg_1843 [Lactococcus lactis subsp. cremoris MG1363] gi|124493440|emb|CAL98414.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071423|gb|ADJ60823.1| hypothetical protein LLNZ_09485 [Lactococcus lactis subsp. cremoris NZ9000] Length = 155 Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 66/144 (45%), Positives = 89/144 (61%), Gaps = 2/144 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-VTAHAEILAIRMGCRI 65 FM+ AL+EAQ AA E+P+G V V + +II+R NR REL T HAE+ AI + Sbjct: 11 FMTEALKEAQKAAENEEVPIGVVIVKDGEIIARDFNR-RELDGRATHHAEVCAIEAANQA 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L + L+VT+EPC MCA AI LARI ++Y+GA+NPK GG + Q +H Sbjct: 70 VGNWRLLDCALFVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQILEDKRLNHR 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 ++ GI E S +I+QDFFK RR Sbjct: 130 VQVESGILEYESAKIMQDFFKNRR 153 >gi|86134359|ref|ZP_01052941.1| cytidine and deoxycytidylate deaminase [Polaribacter sp. MED152] gi|85821222|gb|EAQ42369.1| cytidine and deoxycytidylate deaminase [Polaribacter sp. MED152] Length = 149 Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 64/143 (44%), Positives = 84/143 (58%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A +EA+ A + EIPVGAV VLNN+II+RA N L DVTAHAE+ A L Sbjct: 10 FMKKAYQEAEIAFDKGEIPVGAVIVLNNQIIARAHNLTETLNDVTAHAEMQAFTAAANFL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC MCA A ++I+R+ YGAS PK G + GTQ H Sbjct: 70 GGKYLKDCILYVTLEPCQMCAGASYWSQIQRIVYGASEPKRGFVNLGTQL------HPKT 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E +++ FF E+R Sbjct: 124 KVTSGVLENDCSLLLKRFFIEKR 146 >gi|229188306|ref|ZP_04315357.1| Uncharacterized deaminase yaaJ [Bacillus cereus ATCC 10876] gi|228595174|gb|EEK52942.1| Uncharacterized deaminase yaaJ [Bacillus cereus ATCC 10876] Length = 166 Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VLN ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEEIQEVPIGAVIVLNGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ FF+E R Sbjct: 129 EVVSGVLEEECGTLLTSFFRELR 151 >gi|296123852|ref|YP_003631630.1| CMP/dCMP deaminase zinc-binding protein [Planctomyces limnophilus DSM 3776] gi|296016192|gb|ADG69431.1| CMP/dCMP deaminase zinc-binding protein [Planctomyces limnophilus DSM 3776] Length = 166 Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 88/149 (59%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ + +M AL+ AQ A E+P+GAV V +++II A N+ +LKD TAHAEI+AI Sbjct: 13 LQPHDRWMRQALDLAQQAFAEEEVPIGAVIVKDDQIIGAAWNQREQLKDPTAHAEIVAIT 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L + LYVTLEPC MCA AI ARI R+ YG ++PK G Q A Sbjct: 73 QAAEVIGDWRLEDCTLYVTLEPCPMCAGAIVQARIPRVVYGITDPKAGACHTLYQITDDA 132 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ Q ++I+Q+FF+ +R Sbjct: 133 RLNHRCAVLGGVLAQECKEILQEFFRLQR 161 >gi|29840517|ref|NP_829623.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila caviae GPIC] gi|29834866|gb|AAP05501.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila caviae GPIC] Length = 157 Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 62/149 (41%), Positives = 88/149 (59%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM+ AL+EA+ A ++E+PVG V V +NKII+R N + +D TAHAEIL I Sbjct: 3 IEKDIFFMNQALKEARQAYDQDEVPVGCVIVKDNKIIARGHNTTEKFQDPTAHAEILCIG 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + LY TLEPC MCA AI LARIRR+ + A + + G + +T Sbjct: 63 AAAQYLENWRLVDTVLYCTLEPCLMCAGAIQLARIRRIVWAAPDLRLGAGGSWINVFTAK 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E + GI + S Q+++ FF E+R Sbjct: 123 HPFHQVECFSGICREESEQLMKQFFIEKR 151 >gi|332880818|ref|ZP_08448489.1| cytidine and deoxycytidylate deaminase zinc-binding region [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681201|gb|EGJ54127.1| cytidine and deoxycytidylate deaminase zinc-binding region [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 144 Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 62/149 (41%), Positives = 84/149 (56%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M ALEEA+ A +EIPVGAV V ++I++RA N L DVTAHAE+ I Sbjct: 1 MATDAFYMKKALEEARRAYEEDEIPVGAVVVCGDRILARAHNLTETLTDVTAHAEMQVIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L E LYVTLEPC MCA AI A+++RL YGA++ K G + + Sbjct: 61 AAANALGGKYLNECTLYVTLEPCVMCAGAIGWAQVKRLVYGATDEK-----RGYRMFAPQ 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ S +++DFFK +R Sbjct: 116 AIHPRTEVVSGVMADESMALLKDFFKGKR 144 >gi|218895158|ref|YP_002443569.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus G9842] gi|218541226|gb|ACK93620.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus G9842] Length = 166 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEEMQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVTGVLEEECGTLLTNFFRELR 151 >gi|213962212|ref|ZP_03390476.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga sputigena Capno] gi|213955218|gb|EEB66536.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga sputigena Capno] Length = 144 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 86/149 (57%), Gaps = 6/149 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM ALEEAQ A +EIPVGA+ ++N+II++A N LKDVTAHAE+ AI Sbjct: 1 MNTDEYFMQKALEEAQIAFEEDEIPVGAIITIDNRIIAKAHNLTERLKDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M L + L + +Y+TLEPC MCA A+ +++ RL Y A +P G G + Sbjct: 61 MAAHYLGGKYLTDCTMYITLEPCAMCAGALYWSQLSRLVYAADDPHRGFKAMGGKL---- 116 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI + + +++ FF+++R Sbjct: 117 --HPKTEVVMGILSEEATTLLKQFFQQKR 143 >gi|118586639|ref|ZP_01544079.1| cytidine/deoxycytidylate deaminase [Oenococcus oeni ATCC BAA-1163] gi|118432954|gb|EAV39680.1| cytidine/deoxycytidylate deaminase [Oenococcus oeni ATCC BAA-1163] Length = 156 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 86/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL++AQ A E+P+GAV V +N++I+ NR + TAHAE L I R L Sbjct: 11 FMQLALKQAQTAFDEGEVPIGAVLVKDNQVIAADHNRKEQSGIATAHAEKLVIEGANRSL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC AI +RI RL+YGA++PK GG+ + + +H Sbjct: 71 GDWRLNDCSLFVTIEPCVMCCGAIIQSRIPRLFYGAADPKFGGVSSLYHLLEDSRSNHFV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+YP + ++S ++QDFF++ R Sbjct: 131 EVYPDVLAKQSADLMQDFFRKLR 153 >gi|52145192|ref|YP_081636.1| cytidine/deoxycytidylate deaminase family protein [Bacillus cereus E33L] gi|51978661|gb|AAU20211.1| probable cytidine/deoxycytidylate deaminase family protein [Bacillus cereus E33L] Length = 166 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VLN ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISAAHNLRETEQRSIAHAELLAIDEACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGA +PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGAGDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVDGVLEEECGTLLTNFFRELR 151 >gi|320527136|ref|ZP_08028323.1| cytidine and deoxycytidylate deaminase zinc-binding region [Solobacterium moorei F0204] gi|320132464|gb|EFW25007.1| cytidine and deoxycytidylate deaminase zinc-binding region [Solobacterium moorei F0204] Length = 164 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 57/145 (39%), Positives = 83/145 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK +M ALEEA+ A +E+PVG V V + ++ISR N +L AHAE++AI+ Sbjct: 1 MKTHEEYMELALEEARKAEEIDEVPVGCVIVCDGEVISRGHNLKEQLNQAYAHAEMMAIQ 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + DLYVTLEPC MC I+L+RIR +YYG +PKGG +E + Sbjct: 61 KAAEVKGNWCLNDCDLYVTLEPCMMCTGIINLSRIRTVYYGTQDPKGGCLETVIDLKKIN 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +H P I I ++ +I+ ++F Sbjct: 121 RLNHYPNIVGNILQKECSEILTNYF 145 >gi|30260212|ref|NP_842589.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Bacillus anthracis str. Ames] gi|47525273|ref|YP_016622.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49183056|ref|YP_026308.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Bacillus anthracis str. Sterne] gi|49481561|ref|YP_034377.1| cytidine/deoxycytidylate deaminase family protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65317484|ref|ZP_00390443.1| COG0590: Cytosine/adenosine deaminases [Bacillus anthracis str. A2012] gi|118475795|ref|YP_892946.1| tRNA-adenosine deaminase [Bacillus thuringiensis str. Al Hakam] gi|165873229|ref|ZP_02217840.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0488] gi|167635069|ref|ZP_02393386.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0442] gi|167642053|ref|ZP_02400280.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0193] gi|170688894|ref|ZP_02880096.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0465] gi|170707544|ref|ZP_02897997.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0389] gi|177655687|ref|ZP_02937012.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0174] gi|190569336|ref|ZP_03022228.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis Tsiankovskii-I] gi|196036359|ref|ZP_03103756.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus W] gi|196041943|ref|ZP_03109230.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus NVH0597-99] gi|196047685|ref|ZP_03114889.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus 03BB108] gi|218901223|ref|YP_002449057.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus AH820] gi|225862074|ref|YP_002747452.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus 03BB102] gi|227812695|ref|YP_002812704.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. CDC 684] gi|228912760|ref|ZP_04076409.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228925275|ref|ZP_04088373.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228931524|ref|ZP_04094432.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228943828|ref|ZP_04106215.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229089154|ref|ZP_04220437.1| Uncharacterized deaminase yaaJ [Bacillus cereus Rock3-42] gi|229119684|ref|ZP_04248947.1| Uncharacterized deaminase yaaJ [Bacillus cereus 95/8201] gi|229182416|ref|ZP_04309669.1| Uncharacterized deaminase yaaJ [Bacillus cereus BGSC 6E1] gi|229604522|ref|YP_002864673.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0248] gi|254686610|ref|ZP_05150469.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. CNEVA-9066] gi|254724163|ref|ZP_05185948.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A1055] gi|254737002|ref|ZP_05194707.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. Western North America USA6153] gi|254744200|ref|ZP_05201881.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. Kruger B] gi|254751191|ref|ZP_05203230.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. Vollum] gi|254761661|ref|ZP_05213679.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. Australia 94] gi|30253533|gb|AAP24075.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. Ames] gi|47500421|gb|AAT29097.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49176983|gb|AAT52359.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. Sterne] gi|49333117|gb|AAT63763.1| probable cytidine/deoxycytidylate deaminase family protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118415020|gb|ABK83439.1| tRNA-adenosine deaminase [Bacillus thuringiensis str. Al Hakam] gi|164711027|gb|EDR16593.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0488] gi|167509987|gb|EDR85406.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0193] gi|167529543|gb|EDR92293.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0442] gi|170127540|gb|EDS96414.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0389] gi|170667118|gb|EDT17879.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0465] gi|172080027|gb|EDT65127.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0174] gi|190559558|gb|EDV13551.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis Tsiankovskii-I] gi|195990989|gb|EDX54960.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus W] gi|196021470|gb|EDX60173.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus 03BB108] gi|196027198|gb|EDX65818.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus NVH0597-99] gi|218537868|gb|ACK90266.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus AH820] gi|225787894|gb|ACO28111.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus 03BB102] gi|227005774|gb|ACP15517.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. CDC 684] gi|228601062|gb|EEK58629.1| Uncharacterized deaminase yaaJ [Bacillus cereus BGSC 6E1] gi|228663775|gb|EEL19352.1| Uncharacterized deaminase yaaJ [Bacillus cereus 95/8201] gi|228694177|gb|EEL47857.1| Uncharacterized deaminase yaaJ [Bacillus cereus Rock3-42] gi|228815852|gb|EEM62086.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228828142|gb|EEM73868.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228834389|gb|EEM79928.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228846887|gb|EEM91890.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229268930|gb|ACQ50567.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0248] Length = 166 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VLN ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISAAHNLRETEQRSIAHAELLAIDEACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGA +PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGAGDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVAGVLEEECGTLLTNFFRELR 151 >gi|228956462|ref|ZP_04118260.1| hypothetical protein bthur0005_100 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228803219|gb|EEM50039.1| hypothetical protein bthur0005_100 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 166 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VL+ +IIS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEEIQEVPIGAVIVLDGEIISVAHNLRETEQRSIAHAELLAIDDACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVSGVLEEECGTLLTNFFRELR 151 >gi|228963119|ref|ZP_04124290.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar sotto str. T04001] gi|228796575|gb|EEM44012.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar sotto str. T04001] Length = 195 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEEMQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVTGVLEEECGTLLTNFFRELR 151 >gi|288575144|ref|ZP_06393501.1| CMP/dCMP deaminase zinc-binding [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570885|gb|EFC92442.1| CMP/dCMP deaminase zinc-binding [Dethiosulfovibrio peptidovorans DSM 11002] Length = 162 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 65/149 (43%), Positives = 83/149 (55%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK N FM A+EEA+ AA +IPVGAV V N +I R N R D TAHAEI+AIR Sbjct: 1 MKNKN-FMDLAIEEAKKAASEGDIPVGAVVVYKNDVIGRGRNLRRIDHDPTAHAEIVAIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L ++YVTLEPC MCA AI +RI ++ YG ++PK G Sbjct: 60 QAAKARGSWNLSGCEIYVTLEPCPMCAGAIVQSRIAKVVYGCTDPKAGASGTLYDITRDT 119 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E R R +++DFF E R Sbjct: 120 RLNHRCEVIKGIEEDRCRNMLRDFFSECR 148 >gi|282879130|ref|ZP_06287889.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella buccalis ATCC 35310] gi|281298772|gb|EFA91182.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella buccalis ATCC 35310] Length = 181 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K+ FM AL EA A E+P+GAV +II+RA N+ L DVTAHAE+LAI Sbjct: 39 KQDEQFMQKALAEAHAAYDEGEVPIGAVITCQGRIIARAHNQTETLNDVTAHAEMLAITA 98 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + LP+ LYVT+EPC MCA A+ A++ R+ YGA + K G Q Y Sbjct: 99 AAAQLGGKYLPQCTLYVTVEPCPMCAGAMGWAQVSRIVYGAGDDK-----RGYQRYAPNV 153 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E+ +Q++Q FFK +R Sbjct: 154 LHTKATVTGGVLEEECKQLMQQFFKAKR 181 >gi|290890962|ref|ZP_06554026.1| hypothetical protein AWRIB429_1416 [Oenococcus oeni AWRIB429] gi|290479361|gb|EFD88021.1| hypothetical protein AWRIB429_1416 [Oenococcus oeni AWRIB429] Length = 156 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 86/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL++AQ A E+P+GAV V +N++I+ NR + TAHAE L I R L Sbjct: 11 FMQLALKQAQTAFDEGEVPIGAVLVKDNQVIAADHNRKEQSGIATAHAEKLVIEGANRSL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC AI +RI RL+YGA++PK GG+ + + +H Sbjct: 71 GDWRLNDCSLFVTIEPCVMCCGAIIQSRIPRLFYGAADPKFGGVSSLYHLLEDSRSNHFV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+YP + ++S ++QDFF++ R Sbjct: 131 EVYPDVLAKQSANLMQDFFRKLR 153 >gi|167038582|ref|YP_001666160.1| CMP/dCMP deaminase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167038705|ref|YP_001661690.1| CMP/dCMP deaminase [Thermoanaerobacter sp. X514] gi|256751425|ref|ZP_05492303.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter ethanolicus CCSD1] gi|300913736|ref|ZP_07131053.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter sp. X561] gi|307723248|ref|YP_003902999.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter sp. X513] gi|320116977|ref|YP_004187136.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166852945|gb|ABY91354.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter sp. X514] gi|166857416|gb|ABY95824.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749644|gb|EEU62670.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter ethanolicus CCSD1] gi|300890421|gb|EFK85566.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter sp. X561] gi|307580309|gb|ADN53708.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter sp. X513] gi|319930068|gb|ADV80753.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 148 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 81/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM AL EA+ + E+PVGAV V +II R N+ D TAHAEI+AI+ C+ Sbjct: 3 NKFMEAALLEAKKSYQLGEVPVGAVIVKEGQIIGRGFNQKESTNDATAHAEIIAIKEACK 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + +YVTLEPC MCA AI ARI+R+Y GA + K G + Sbjct: 63 TLGSWRLDDCSMYVTLEPCPMCAGAILEARIKRVYIGAESDKSGAAGTVVDILNNSYLGS 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+Y GI E+ + +++DFF+ R Sbjct: 123 KTEVYFGIMEEECKTLLKDFFENLR 147 >gi|114327121|ref|YP_744278.1| tRNA-specific adenosine deaminase [Granulibacter bethesdensis CGDNIH1] gi|114315295|gb|ABI61355.1| tRNA-specific adenosine deaminase [Granulibacter bethesdensis CGDNIH1] Length = 178 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 58/128 (45%), Positives = 81/128 (63%), Gaps = 1/128 (0%) Query: 23 EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV + ++++A N D +AHAE+LA+R + L L DLYVTLE Sbjct: 51 EVPVGAVVISPEGYLLAQAHNLTEANHDASAHAEMLAMREAAKRLGSTRLIGCDLYVTLE 110 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA A S RIRR+ +GA +PKGGGIE+G + ++CHH PEI G+ E + ++ Sbjct: 111 PCPMCAQAASHFRIRRIIFGAYDPKGGGIEHGARVLNASSCHHQPEIIGGVRETEAVALL 170 Query: 142 QDFFKERR 149 + FF+ RR Sbjct: 171 RSFFQARR 178 >gi|145589597|ref|YP_001156194.1| CMP/dCMP deaminase, zinc-binding [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048003|gb|ABP34630.1| CMP/dCMP deaminase, zinc-binding protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 152 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 87/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E+A+ AAL E+PVGAV V + K+IS A N+ D +AHAE+LA+R + Sbjct: 10 FMQQAIEQAKLAALAGEVPVGAVVVRDGKVISSAFNKPISTHDPSAHAEMLALRAAAQSE 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP LYVTLEPC MC+ A+ AR+ R+ YGA++PK G + ++ +H Sbjct: 70 ENYRLPGTTLYVTLEPCVMCSGAMLHARLDRVVYGAADPKTGAAGSVFDVFSSKQINHQT 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + Q++++FFKERR Sbjct: 130 SVEGGVMGEECGQLLRNFFKERR 152 >gi|325281446|ref|YP_004253988.1| CMP/dCMP deaminase zinc-binding protein [Odoribacter splanchnicus DSM 20712] gi|324313255|gb|ADY33808.1| CMP/dCMP deaminase zinc-binding protein [Odoribacter splanchnicus DSM 20712] Length = 145 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 66/149 (44%), Positives = 82/149 (55%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL+EA+ AA EIPVGAV V KII+RA N +L DVTAHAE+LAI Sbjct: 1 MTTHEYYMHKALQEARQAAEEGEIPVGAVVVCKGKIIARAHNETEKLNDVTAHAEMLAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M L + L E LYVT+EPCTMCA A+S A++ L GA +P G T Sbjct: 61 MATSYLGGKYLNECTLYVTMEPCTMCAGALSWAQLGELVTGAPDP-----HRGYSRLTPP 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H I GI +I++ FFK +R Sbjct: 116 VLHPKTRITSGILTGECSEIVKQFFKAKR 144 >gi|259048082|ref|ZP_05738483.1| tRNA-specific adenosine deaminase [Granulicatella adiacens ATCC 49175] gi|259035143|gb|EEW36398.1| tRNA-specific adenosine deaminase [Granulicatella adiacens ATCC 49175] Length = 168 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 59/146 (40%), Positives = 87/146 (59%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EAQ A + E+P+GAV VLN +II R N + +D T HAEI AIR Sbjct: 3 LQEKEFFMREALKEAQKAYDQEEVPIGAVVVLNGEIIGRGHNLREKEQDATLHAEIKAIR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + +L+VTLEPC MC+ A+ LAR++++ +GA +PK G + Sbjct: 63 QANQHLGSWRLEDCELFVTLEPCPMCSGAMILARMKKVVFGAFDPKAGTAGTFMNLLQDS 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 +H E+ GI E ++I+Q FFK Sbjct: 123 RFNHQVEVEQGILEDECKEILQQFFK 148 >gi|229053868|ref|ZP_04195305.1| hypothetical protein bcere0026_110 [Bacillus cereus AH603] gi|228721478|gb|EEL72995.1| hypothetical protein bcere0026_110 [Bacillus cereus AH603] Length = 164 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/149 (41%), Positives = 86/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI Sbjct: 1 MERDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + LYVTLEPC MCA I L+RI+R+ YGAS+PKGG T Sbjct: 61 EACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRIKRVVYGASDPKGGCAGTLMNLLTDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ FF+E R Sbjct: 121 RFNHQCEVVAGVLEEECGTLLTIFFRELR 149 >gi|228918972|ref|ZP_04082353.1| hypothetical protein bthur0011_100 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840687|gb|EEM85947.1| hypothetical protein bthur0011_100 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 166 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVSGVLEEECGTLLTNFFRELR 151 >gi|228937324|ref|ZP_04099972.1| hypothetical protein bthur0008_110 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970210|ref|ZP_04130871.1| hypothetical protein bthur0003_100 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228976780|ref|ZP_04137194.1| hypothetical protein bthur0002_100 [Bacillus thuringiensis Bt407] gi|228782942|gb|EEM31106.1| hypothetical protein bthur0002_100 [Bacillus thuringiensis Bt407] gi|228789511|gb|EEM37429.1| hypothetical protein bthur0003_100 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228822349|gb|EEM68329.1| hypothetical protein bthur0008_110 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326937814|gb|AEA13710.1| cytosine deaminase [Bacillus thuringiensis serovar chinensis CT-43] Length = 166 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVSGVLEEECGTLLTNFFRELR 151 >gi|310828329|ref|YP_003960686.1| alpha amylase catalytic region [Eubacterium limosum KIST612] gi|308740063|gb|ADO37723.1| alpha amylase catalytic region [Eubacterium limosum KIST612] Length = 630 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 57/142 (40%), Positives = 86/142 (60%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 MS A+EEA+ E+PVGAV + N +II+ A N+ L+D TAHAE+L IR + L Sbjct: 489 MSKAIEEAERGIEEGEVPVGAVILHNGEIIAAAHNQKETLQDPTAHAEMLVIREASKKLG 548 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L + +LYVT EPC MC A+ +RIR+L YG + GG+E + ++ E Sbjct: 549 RWRLDDCELYVTAEPCPMCMGAVIQSRIRKLVYGTWETRFGGVETTAELGKHPMLSNATE 608 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IY GI E++ +++++ FF+ R Sbjct: 609 IYSGICEEKCQELLERFFQNNR 630 >gi|212637865|ref|YP_002314385.1| cytosine/adenosine deaminase [Anoxybacillus flavithermus WK1] gi|212559345|gb|ACJ32400.1| Cytosine/adenosine deaminase [Anoxybacillus flavithermus WK1] Length = 177 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 62/150 (41%), Positives = 91/150 (60%), Gaps = 2/150 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-RNRELKDVTAHAEILAI 59 MK +M A+EEA+ A E+P+GAV V N+++I+RA N R R+ + + AHAE+LAI Sbjct: 16 MKNDEYYMHLAIEEAKKAEKIGEVPIGAVIVYNDQVIARAHNLRERDQRSI-AHAELLAI 74 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 C+ L L + LYVTLEPC MCA AI L+RI+R+ +GAS+PKGG Sbjct: 75 DEACKKLGTWRLEQATLYVTLEPCAMCAGAIVLSRIKRVVFGASDPKGGCAGTLMNLLQE 134 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI ++ ++ +FF++ R Sbjct: 135 PRFNHQVEVVSGILGEQCGNMLSEFFRQLR 164 >gi|229074082|ref|ZP_04207131.1| hypothetical protein bcere0024_110 [Bacillus cereus Rock4-18] gi|229094742|ref|ZP_04225750.1| hypothetical protein bcere0020_110 [Bacillus cereus Rock3-29] gi|229100808|ref|ZP_04231626.1| hypothetical protein bcere0019_200 [Bacillus cereus Rock3-28] gi|228682615|gb|EEL36674.1| hypothetical protein bcere0019_200 [Bacillus cereus Rock3-28] gi|228688680|gb|EEL42550.1| hypothetical protein bcere0020_110 [Bacillus cereus Rock3-29] gi|228709045|gb|EEL61169.1| hypothetical protein bcere0024_110 [Bacillus cereus Rock4-18] Length = 166 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVTGVLEEECGTLLTNFFRELR 151 >gi|228898775|ref|ZP_04063059.1| hypothetical protein bthur0014_110 [Bacillus thuringiensis IBL 4222] gi|228860867|gb|EEN05243.1| hypothetical protein bthur0014_110 [Bacillus thuringiensis IBL 4222] Length = 166 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVTGVLEEECGTLLTNFFRELR 151 >gi|30018294|ref|NP_829925.1| cytosine deaminase [Bacillus cereus ATCC 14579] gi|229125538|ref|ZP_04254572.1| hypothetical protein bcere0015_100 [Bacillus cereus BDRD-Cer4] gi|29893834|gb|AAP07126.1| Cytosine deaminase [Bacillus cereus ATCC 14579] gi|228657922|gb|EEL13726.1| hypothetical protein bcere0015_100 [Bacillus cereus BDRD-Cer4] Length = 166 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDDACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVSGVLEEECGTLLTNFFRELR 151 >gi|229039926|ref|ZP_04189692.1| hypothetical protein bcere0027_100 [Bacillus cereus AH676] gi|228727416|gb|EEL78607.1| hypothetical protein bcere0027_100 [Bacillus cereus AH676] Length = 166 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDDACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVSGVLEEECGTLLTNFFRELR 151 >gi|229142827|ref|ZP_04271271.1| hypothetical protein bcere0012_100 [Bacillus cereus BDRD-ST24] gi|229148430|ref|ZP_04276688.1| hypothetical protein bcere0011_100 [Bacillus cereus m1550] gi|296500855|ref|YP_003662555.1| cytosine deaminase [Bacillus thuringiensis BMB171] gi|228635039|gb|EEK91610.1| hypothetical protein bcere0011_100 [Bacillus cereus m1550] gi|228640641|gb|EEK97027.1| hypothetical protein bcere0012_100 [Bacillus cereus BDRD-ST24] gi|296321907|gb|ADH04835.1| cytosine deaminase [Bacillus thuringiensis BMB171] Length = 166 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDDACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVSGVLEEECGTLLTNFFRELR 151 >gi|126662495|ref|ZP_01733494.1| putative cytosine/adenosine deaminase [Flavobacteria bacterium BAL38] gi|126625874|gb|EAZ96563.1| putative cytosine/adenosine deaminase [Flavobacteria bacterium BAL38] Length = 146 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/145 (40%), Positives = 86/145 (59%), Gaps = 6/145 (4%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL+EA+ A + EIPVGAV V++NK+I+R N L DVTAHAE+ AI Sbjct: 8 DYFMKKALQEAETAFEKGEIPVGAVIVIDNKVIARTHNLTELLHDVTAHAEMQAITSAAN 67 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + L + LYVTLEPC MCA A+ ++I ++ +GAS+ G + GTQ H Sbjct: 68 FLGGKYLKDCTLYVTLEPCQMCAGALYWSQISKIVFGASDENRGFQKMGTQL------HP 121 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E+ +++ FFK +R Sbjct: 122 KTQVISGVLEKECADLMKSFFKNKR 146 >gi|268318039|ref|YP_003291758.1| CMP/dCMP deaminase zinc-binding protein [Rhodothermus marinus DSM 4252] gi|262335573|gb|ACY49370.1| CMP/dCMP deaminase zinc-binding protein [Rhodothermus marinus DSM 4252] Length = 158 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA+ A E+PVGAV V +++I+ R N +LKD TAHAE+LAI C L Sbjct: 13 WMEAALREAEQAFEEGEVPVGAVVVKDDRIVGRGHNCVEQLKDPTAHAEMLAITAACATL 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVTLEPC MCA AI AR+ R+ +GA + K G +H Sbjct: 73 DTKYLRGCTLYVTLEPCPMCAGAIVWARLDRVVFGAFDEKAGAASTLYNILQDPRLNHRV 132 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ +R+ ++Q FF+ERR Sbjct: 133 EVISGVEAERAAALLQRFFRERR 155 >gi|228905818|ref|ZP_04069717.1| hypothetical protein bthur0013_110 [Bacillus thuringiensis IBL 200] gi|228853826|gb|EEM98584.1| hypothetical protein bthur0013_110 [Bacillus thuringiensis IBL 200] Length = 166 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVTGVLEEECGTLLTNFFRELR 151 >gi|254467918|ref|ZP_05081324.1| tRNA-specific adenosine deaminase [beta proteobacterium KB13] gi|207086728|gb|EDZ64011.1| tRNA-specific adenosine deaminase [beta proteobacterium KB13] Length = 160 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM AL+EA+ A +EIP+GA+ LNN+II R N + D T HAEI+A+R Sbjct: 12 MTDHTQFMQAALDEAEKARSLDEIPIGAIVTLNNEIIGRGFNSVIKNSDPTCHAEIMALR 71 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 LS LPEV+LYVTLEPC MC AI AR++++Y+GA + K + Q Sbjct: 72 DAAHHLSNYRLPEVNLYVTLEPCIMCLGAIFHARVKQVYFGAYDTKFHSCDPSQQLVNNK 131 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H GI E+ +++++FK +R Sbjct: 132 IINHHTSFEGGILEEECSTLLKNYFKNKR 160 >gi|224025750|ref|ZP_03644116.1| hypothetical protein BACCOPRO_02491 [Bacteroides coprophilus DSM 18228] gi|224018986|gb|EEF76984.1| hypothetical protein BACCOPRO_02491 [Bacteroides coprophilus DSM 18228] Length = 144 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/149 (42%), Positives = 84/149 (56%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL+EA+ AA R E+PVGAV V ++II+RA N L DVTAHAE+ AI Sbjct: 1 MADDTYYMRQALQEAREAANRGEVPVGAVVVCRDRIIARAHNLTETLTDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L LYVT+EPC MCA AI+ A+ RL YGA + K G Q Y Sbjct: 61 AAAGWLGGKYLNNCTLYVTIEPCVMCAGAIAWAQTGRLVYGADDEK-----RGFQRYAPQ 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ Q+++DFF++RR Sbjct: 116 ALHPKTQVTSGVLADECAQLMKDFFQKRR 144 >gi|218234516|ref|YP_002364872.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus B4264] gi|218162473|gb|ACK62465.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus B4264] Length = 166 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDDACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDDRFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVSGVLEEECGTLLTNFFRELR 151 >gi|255023462|ref|ZP_05295448.1| tRNA-specific adenosine deaminase [Listeria monocytogenes FSL J1-208] Length = 156 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 88/143 (61%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 6 FMQQALEEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 66 NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ S +++++FF++ R Sbjct: 126 EVEAGLMEKESSEMLKNFFQDLR 148 >gi|87310742|ref|ZP_01092869.1| cytosine deaminase [Blastopirellula marina DSM 3645] gi|87286499|gb|EAQ78406.1| cytosine deaminase [Blastopirellula marina DSM 3645] Length = 166 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/148 (43%), Positives = 87/148 (58%), Gaps = 6/148 (4%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +FM ALE A+ AA E+PVGA+ V NN++I+ A N+ L D TAHAE++AI Sbjct: 17 QIFMYQALELAEQAAREKEVPVGAIIVHNNRVIAAAHNQRETLHDPTAHAEMIAITQAAE 76 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--- 121 L L + LYVTLEPC MCA AI ARI + +GA +PK G + T YTL + Sbjct: 77 SLQNWRLADCTLYVTLEPCPMCAGAILQARIPTVVFGAIDPKAGAV---TSLYTLLSDSR 133 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ PGI + ++ +FF+ RR Sbjct: 134 LNHRCEVVPGILAPQCGDVLTEFFRARR 161 >gi|229107707|ref|ZP_04237345.1| hypothetical protein bcere0018_100 [Bacillus cereus Rock1-15] gi|228675747|gb|EEL30953.1| hypothetical protein bcere0018_100 [Bacillus cereus Rock1-15] Length = 166 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDDACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVSGVLEEECGALLTNFFRELR 151 >gi|224498434|ref|ZP_03666783.1| hypothetical protein LmonF1_01565 [Listeria monocytogenes Finland 1988] Length = 156 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 86/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 6 FMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 66 NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E S ++++ FF+E R Sbjct: 126 EVEAGLMESESSEMLKSFFQELR 148 >gi|16804756|ref|NP_466241.1| hypothetical protein lmo2719 [Listeria monocytogenes EGD-e] gi|224502871|ref|ZP_03671178.1| hypothetical protein LmonFR_10179 [Listeria monocytogenes FSL R2-561] gi|255029049|ref|ZP_05301000.1| hypothetical protein LmonL_07681 [Listeria monocytogenes LO28] gi|16412219|emb|CAD00932.1| lmo2719 [Listeria monocytogenes EGD-e] Length = 156 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 86/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 6 FMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 66 NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E S ++++ FF+E R Sbjct: 126 EVEAGLMESESSEMLKSFFQELR 148 >gi|224368847|ref|YP_002603009.1| putative riboflavin biosynthesis protein ribD [Desulfobacterium autotrophicum HRM2] gi|223691564|gb|ACN14847.1| putative riboflavin biosynthesis protein ribD [Desulfobacterium autotrophicum HRM2] Length = 150 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/144 (43%), Positives = 87/144 (60%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M ALEEA+ AA +E+PVGAV V +I++R N+ L D TAHAE+LA+RMG Sbjct: 6 YMKIALEEAEKAARMDEVPVGAVLVDGTGRILARTHNQPITLCDPTAHAEMLALRMGGEK 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 LP LY T+EPC MC AI AR+ R+ YGA +PK G + F A +H+ Sbjct: 66 TGNYRLPGATLYSTIEPCVMCMGAIIHARLSRIVYGACDPKWGAAGSLYNFAFDARLNHT 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 EI PG+ + + +II+ FF+ +R Sbjct: 126 LEIVPGVCKDEATEIIRGFFRNKR 149 >gi|332637118|ref|ZP_08415981.1| tRNA-adenosine deaminase [Weissella cibaria KACC 11862] Length = 181 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 84/145 (57%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EA+ A E+P+GAV V + +II R N L+D + HAE+ AI R Sbjct: 10 DYFMGEAIKEAKKAGALGEVPIGAVVVQHGEIIGRGFNLRERLEDASQHAELQAITEANR 69 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 ++ LP+ L+VTLEPC MCA I +RI +YYGA +PK G + + +H Sbjct: 70 LVKSWRLPDAQLFVTLEPCIMCAGIIQQSRISDVYYGAEDPKAGAVHSMYHILEDERLNH 129 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ GI EQ S ++++FF+E R Sbjct: 130 QVHVHQGIREQESGDMLRNFFREIR 154 >gi|312869691|ref|ZP_07729838.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus oris PB013-T2-3] gi|311094740|gb|EFQ53037.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus oris PB013-T2-3] Length = 164 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/144 (43%), Positives = 88/144 (61%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K+ FM+ AL EA+ AA+ NE+P+GAV V +N+II R N +DVT HAE+LAI Sbjct: 3 KEQQKFMAAALAEARQAAILNEVPIGAVVVKDNQIIGRGHNMREHFQDVTYHAEMLAIME 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C L L + DLYVTLEPC MC+ AI ARI LYYGA++PK G +++ + Sbjct: 63 ACERLHSWRLEDCDLYVTLEPCIMCSGAIINARIANLYYGAADPKAGAVDSLYHLLADSR 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 +H + GI + Q++++FF Sbjct: 123 LNHQVRVESGIMQAECSQVLKEFF 146 >gi|47095526|ref|ZP_00233135.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes str. 1/2a F6854] gi|254899824|ref|ZP_05259748.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes J0161] gi|254912971|ref|ZP_05262983.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes J2818] gi|254937352|ref|ZP_05269049.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes F6900] gi|255025258|ref|ZP_05297244.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes FSL J2-003] gi|284800395|ref|YP_003412260.1| hypothetical protein LM5578_0141 [Listeria monocytogenes 08-5578] gi|284993581|ref|YP_003415349.1| hypothetical protein LM5923_0141 [Listeria monocytogenes 08-5923] gi|47016136|gb|EAL07060.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes str. 1/2a F6854] gi|258609958|gb|EEW22566.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes F6900] gi|284055957|gb|ADB66898.1| hypothetical protein LM5578_0141 [Listeria monocytogenes 08-5578] gi|284059048|gb|ADB69987.1| hypothetical protein LM5923_0141 [Listeria monocytogenes 08-5923] gi|293590973|gb|EFF99307.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes J2818] Length = 156 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 86/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 6 FMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 66 NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E S ++++ FF+E R Sbjct: 126 EVEAGLMESESSEMLKSFFQELR 148 >gi|163938030|ref|YP_001642914.1| CMP/dCMP deaminase zinc-binding [Bacillus weihenstephanensis KBAB4] gi|163860227|gb|ABY41286.1| CMP/dCMP deaminase zinc-binding [Bacillus weihenstephanensis KBAB4] Length = 164 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/145 (42%), Positives = 84/145 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI Sbjct: 1 MERDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + LYVTLEPC MCA I L+RI+R+ YGAS+PKGG T Sbjct: 61 EACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRIKRVVYGASDPKGGCAGTLMNLLTDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +H E+ PG+ E+ ++ FF Sbjct: 121 RFNHQCEVVPGVLEEECGTLLTIFF 145 >gi|223983492|ref|ZP_03633678.1| hypothetical protein HOLDEFILI_00958 [Holdemania filiformis DSM 12042] gi|223964664|gb|EEF68990.1| hypothetical protein HOLDEFILI_00958 [Holdemania filiformis DSM 12042] Length = 181 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 58/148 (39%), Positives = 86/148 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM A++EA+ A +E+P+GAV V + KI++R N + + AHAEI+AI Sbjct: 8 KNDEYFMRQAIKEARKAEALDEVPIGAVLVHDGKILARGHNLREKKQSSLAHAEIVAIEK 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 CR L + LYVTLEPC MCA AI +RI ++ YGA++PKGG + Y + Sbjct: 68 ACRKTGSWRLEDCVLYVTLEPCPMCAGAILQSRIAKVVYGAADPKGGSVGTCFNLYDIPG 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ +++ FFK++R Sbjct: 128 FNHYPEVLGGVLSVDCAMLLKTFFKQKR 155 >gi|206972670|ref|ZP_03233610.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus AH1134] gi|228950569|ref|ZP_04112705.1| hypothetical protein bthur0006_110 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229077294|ref|ZP_04209977.1| hypothetical protein bcere0023_200 [Bacillus cereus Rock4-2] gi|229176621|ref|ZP_04304027.1| hypothetical protein bcere0005_100 [Bacillus cereus 172560W] gi|206732390|gb|EDZ49572.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus AH1134] gi|228606851|gb|EEK64266.1| hypothetical protein bcere0005_100 [Bacillus cereus 172560W] gi|228706017|gb|EEL58322.1| hypothetical protein bcere0023_200 [Bacillus cereus Rock4-2] gi|228809112|gb|EEM55595.1| hypothetical protein bthur0006_110 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 166 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ FF+E R Sbjct: 129 EVVSGVLEEECGTLLTSFFRELR 151 >gi|146278266|ref|YP_001168425.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides ATCC 17025] gi|145556507|gb|ABP71120.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides ATCC 17025] Length = 114 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/113 (56%), Positives = 79/113 (69%), Gaps = 1/113 (0%) Query: 37 ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96 ++RAGNR REL D TAHAE+LAIR C L E L DLYVTLEPC MCAAAIS ARI Sbjct: 1 MARAGNRCRELSDPTAHAEMLAIRAACAELG-ERLTGCDLYVTLEPCPMCAAAISAARIA 59 Query: 97 RLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 RLYYGA++PK GG+ G + + CHH P++Y GI E+ + +++ FF RR Sbjct: 60 RLYYGAADPKSGGVAQGARVFAHPQCHHVPDVYDGIREEEAAALLRGFFAARR 112 >gi|319936699|ref|ZP_08011112.1| tRNA-adenosine deaminase [Coprobacillus sp. 29_1] gi|319808256|gb|EFW04821.1| tRNA-adenosine deaminase [Coprobacillus sp. 29_1] Length = 148 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 88/143 (61%), Gaps = 3/143 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A +EA A +E+P+GA+ V ++ +I+ A N+ +DVTAHAE+LAI+ C+IL Sbjct: 6 YMKLAYQEAIKAKDIDEVPIGAIIVKDDCVIASAYNQKESKRDVTAHAEMLAIQKACKIL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LY TLEPC MC+ AI +RI ++ YGAS + GI +Q+ T +H P Sbjct: 66 GTWHLDGCTLYSTLEPCMMCSGAIIQSRIAKVVYGASGQRWHGI---SQYLHNHTFNHYP 122 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I GI E+ Q+I D+FK +R Sbjct: 123 DITSGILEEDCCQLISDYFKSKR 145 >gi|229113696|ref|ZP_04243133.1| Uncharacterized deaminase yaaJ [Bacillus cereus Rock1-3] gi|228669762|gb|EEL25167.1| Uncharacterized deaminase yaaJ [Bacillus cereus Rock1-3] Length = 166 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKNL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVTGVLEEECGTLLTNFFRELR 151 >gi|229067785|ref|ZP_04201104.1| hypothetical protein bcere0025_110 [Bacillus cereus F65185] gi|228715338|gb|EEL67195.1| hypothetical protein bcere0025_110 [Bacillus cereus F65185] Length = 166 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ FF+E R Sbjct: 129 EVVSGVLEEECGTLLTSFFRELR 151 >gi|254830845|ref|ZP_05235500.1| hypothetical protein Lmon1_05774 [Listeria monocytogenes 10403S] Length = 156 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 86/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 6 FMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 66 NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E S ++++ FF+E R Sbjct: 126 EVEAGLMESESSEMLKSFFQELR 148 >gi|229170871|ref|ZP_04298476.1| hypothetical protein bcere0006_110 [Bacillus cereus MM3] gi|228612606|gb|EEK69823.1| hypothetical protein bcere0006_110 [Bacillus cereus MM3] Length = 166 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LA+ C+ L Sbjct: 9 FMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLALDEACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVAGVLEEECGTLLTNFFRELR 151 >gi|39938589|ref|NP_950355.1| cytosine/adenosine deaminase [Onion yellows phytoplasma OY-M] gi|39721698|dbj|BAD04188.1| cytosine/adenosine deaminase [Onion yellows phytoplasma OY-M] Length = 161 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/149 (42%), Positives = 84/149 (56%), Gaps = 11/149 (7%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL+EAQ A L+ E+P+GAVAVLN KII+RA N K HAE LA+ + Sbjct: 10 FFMKEALKEAQKAYLKEEVPIGAVAVLNQKIIARAHNNRNTKKLFFGHAEFLALMKAGKK 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 ++ L +V LYVTLEPC MC AI A I+ LYYG S +E F +++ + Sbjct: 70 INSRFLNDVSLYVTLEPCLMCTGAIIQAGIKNLYYGTS------MEKSYSFNDMSSIQNM 123 Query: 126 P-----EIYPGISEQRSRQIIQDFFKERR 149 P I G+ Q S Q++Q FF+E R Sbjct: 124 PFMDKLNIQSGLLAQESMQLLQKFFQELR 152 >gi|150009165|ref|YP_001303908.1| putative cytosine/adenosine deaminase [Parabacteroides distasonis ATCC 8503] gi|255015772|ref|ZP_05287898.1| putative cytosine/adenosine deaminase [Bacteroides sp. 2_1_7] gi|256841721|ref|ZP_05547227.1| cytosine/adenosine deaminase [Parabacteroides sp. D13] gi|298377094|ref|ZP_06987048.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 3_1_19] gi|149937589|gb|ABR44286.1| putative cytosine/adenosine deaminase [Parabacteroides distasonis ATCC 8503] gi|256736615|gb|EEU49943.1| cytosine/adenosine deaminase [Parabacteroides sp. D13] gi|298266078|gb|EFI07737.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 3_1_19] Length = 146 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/143 (46%), Positives = 85/143 (59%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+ AA E+PVGAV V NN+II+RA N+ L DVTAHAE+LAI +L Sbjct: 9 FMKQALVEARAAASEGEVPVGAVIVCNNQIIARAHNQTECLNDVTAHAEMLAITAAAGVL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVT+EPC MCA AI A++ + YGAS+ K G + Q + H Sbjct: 69 GAKYLTNCSLYVTVEPCIMCAGAIGWAQLSTIVYGASDDKRGFSKFAPQAF-----HPKA 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI E+ + +Q FFK+RR Sbjct: 124 IIKKGILEKECAEEMQRFFKQRR 146 >gi|42779100|ref|NP_976347.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Bacillus cereus ATCC 10987] gi|42735015|gb|AAS38955.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus ATCC 10987] Length = 166 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VLN ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+ R Sbjct: 129 EVVAGVLEEECGTLLTNFFRALR 151 >gi|259502690|ref|ZP_05745592.1| tRNA-specific adenosine deaminase [Lactobacillus antri DSM 16041] gi|259169335|gb|EEW53830.1| tRNA-specific adenosine deaminase [Lactobacillus antri DSM 16041] Length = 173 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 62/139 (44%), Positives = 85/139 (61%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A+ EA+ AAL NE+P+GAV V + +II R N +DVT HAE+LAI C L Sbjct: 17 FMAAAVAEARQAALLNEVPIGAVVVKDQQIIGRGHNMREHFQDVTYHAEMLAIMEACERL 76 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L DLYVTLEPC MC+ AI ARI LYYGA++PK G +E+ +H Sbjct: 77 HSWRLEGCDLYVTLEPCIMCSGAIINARIANLYYGAADPKAGAVESLYHLMNDPRLNHQV 136 Query: 127 EIYPGISEQRSRQIIQDFF 145 ++ G+ ++ Q+++DFF Sbjct: 137 QVASGVMQEECSQMLKDFF 155 >gi|315284032|ref|ZP_07872011.1| tRNA-specific adenosine deaminase [Listeria marthii FSL S4-120] gi|313612324|gb|EFR86487.1| tRNA-specific adenosine deaminase [Listeria marthii FSL S4-120] Length = 156 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 86/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 6 FMQQALEEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 66 NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E S ++++ FF+E R Sbjct: 126 EVEAGLMEAESSEMLKSFFQELR 148 >gi|257871097|ref|ZP_05650750.1| cytidine/deoxycytidylate deaminase [Enterococcus gallinarum EG2] gi|257805261|gb|EEV34083.1| cytidine/deoxycytidylate deaminase [Enterococcus gallinarum EG2] Length = 173 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EAQ A E+P+GAV VL +II R N + ++ TAHAE+ AI+ C+ + Sbjct: 20 FMREALKEAQKAEAIAEVPIGAVVVLEGQIIGRGHNLREKQQEATAHAEMFAIQQACQAI 79 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VTLEPC MC+ A+ LAR+ +Y+GA +PKGG + +H Sbjct: 80 ESWRLEQAQLFVTLEPCPMCSGAMMLARVEEVYFGAYDPKGGAAGSLLNLLEDERFNHWS 139 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI E+ Q+++DFF+ R Sbjct: 140 YVEGGILEEACGQVLKDFFRALR 162 >gi|217966083|ref|YP_002351761.1| tRNA-specific adenosine deaminase [Listeria monocytogenes HCC23] gi|217335353|gb|ACK41147.1| tRNA-specific adenosine deaminase [Listeria monocytogenes HCC23] gi|307572307|emb|CAR85486.1| tRNA-specific adenosine deaminase, putative [Listeria monocytogenes L99] Length = 156 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 87/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 6 FMQQALEEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 66 NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ S ++++ FF++ R Sbjct: 126 EVEAGLMEKESSEMLKSFFQDLR 148 >gi|46908898|ref|YP_015287.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes serotype 4b str. F2365] gi|254851976|ref|ZP_05241324.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL R2-503] gi|254931009|ref|ZP_05264368.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes HPB2262] gi|254994111|ref|ZP_05276301.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes FSL J2-064] gi|300763522|ref|ZP_07073520.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes FSL N1-017] gi|46882171|gb|AAT05464.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes serotype 4b str. F2365] gi|258605274|gb|EEW17882.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL R2-503] gi|293582555|gb|EFF94587.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes HPB2262] gi|300515799|gb|EFK42848.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes FSL N1-017] gi|328469576|gb|EGF40517.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes 220] gi|332313149|gb|EGJ26244.1| tRNA-specific adenosine deaminase [Listeria monocytogenes str. Scott A] Length = 156 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 87/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 6 FMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 66 NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ S ++++ FF++ R Sbjct: 126 EVEAGLMEKESSEMLKSFFQDLR 148 >gi|301051758|ref|YP_003789969.1| putative cytidine/deoxycytidylate deaminase family protein [Bacillus anthracis CI] gi|300373927|gb|ADK02831.1| probable cytidine/deoxycytidylate deaminase family protein [Bacillus cereus biovar anthracis str. CI] Length = 166 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VLN ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISAAHNLRETEQRSIAHAELLAIDEACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R+ R+ YGA +PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVNRVVYGAGDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 129 EVVAGVLEEECGTLLTNFFRELR 151 >gi|91201429|emb|CAJ74489.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 158 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 62/141 (43%), Positives = 82/141 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA+ AA NE+PVGAV V +N+II+RA N+ LKD TAHAE++AI G L Sbjct: 13 FMRQAIKEAEKAADINEVPVGAVIVYDNRIIARAHNQREMLKDPTAHAEMIAITQGAEYL 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +YVTLEPC MCA A+ +RI +L YGA + K G + +H Sbjct: 73 QNWRLTGSTIYVTLEPCVMCAGALVQSRIDKLVYGAVDKKAGACVSVMNLVQNTKLNHRL 132 Query: 127 EIYPGISEQRSRQIIQDFFKE 147 E+ P I R I++ FF E Sbjct: 133 EVIPDILADECRDILKRFFLE 153 >gi|294674558|ref|YP_003575174.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Prevotella ruminicola 23] gi|294472670|gb|ADE82059.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Prevotella ruminicola 23] Length = 150 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 64/150 (42%), Positives = 87/150 (58%), Gaps = 9/150 (6%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 KK +M AL+EA A EIP+GAV V ++++SRA N L DVTAHAE+ AI Sbjct: 8 KKDERYMQMALDEAHLALEAGEIPIGAVVVCKDRVVSRAHNLTETLCDVTAHAEMQAITA 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA- 120 L + L E LYVT+EPCTMCA AI A+I R+ YGA + K G ++ LA Sbjct: 68 AANTLGGKYLTECTLYVTVEPCTMCAGAIGWAQIPRIVYGAPDDKRG-------YHLLAP 120 Query: 121 -TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ E R+++Q+FFK +R Sbjct: 121 HAFHPKAQVTQGVLEDECRELMQNFFKAKR 150 >gi|42518517|ref|NP_964447.1| hypothetical protein LJ0422 [Lactobacillus johnsonii NCC 533] gi|41582802|gb|AAS08413.1| hypothetical protein LJ_0422 [Lactobacillus johnsonii NCC 533] Length = 160 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 88/144 (61%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRI 65 +M A E+A+ A + E+P+GAV V + + G REL +D T HAE++AIR C+ Sbjct: 10 YMHLAFEQAKKAEEQGEVPIGAVVVDKDGNVIGEGYNRRELDEDATQHAEMIAIRQACKN 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L+ L + L++TLEPC MC+ AI +R+ +YYGA +PK G + + + +H Sbjct: 70 LNSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAASSVIDLFKVEKFNHH 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P+IY G+ ++ Q+++DFF+E R Sbjct: 130 PKIYGGLFRDQAAQMLKDFFREIR 153 >gi|229552943|ref|ZP_04441668.1| nucleoside deaminase [Lactobacillus rhamnosus LMS2-1] gi|229313687|gb|EEN79660.1| nucleoside deaminase [Lactobacillus rhamnosus LMS2-1] Length = 170 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 66/148 (44%), Positives = 85/148 (57%), Gaps = 6/148 (4%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N +M AL EA+ AA E+P+GAV V + +II R N +D T HAEILAI+ CR Sbjct: 9 NQYMIAALVEAKKAAAIGEVPIGAVVVHDQQIIGRGYNLRETTQDATQHAEILAIQAACR 68 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL---AT 121 L L + L+VTLEPC MCA A+ ARI Y+GA++PK G GT FY L Sbjct: 69 QLGTWRLEDCSLFVTLEPCPMCAGAMINARIATCYFGATDPKAG--VAGT-FYNLLEDTR 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + PGI S ++QDFF+ R Sbjct: 126 FNHQVAVVPGIQATASAALLQDFFRAIR 153 >gi|258540446|ref|YP_003174945.1| CMP/dCMP deaminase zinc-binding [Lactobacillus rhamnosus Lc 705] gi|257152122|emb|CAR91094.1| CMP/dCMP deaminase, zinc-binding [Lactobacillus rhamnosus Lc 705] Length = 168 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 66/148 (44%), Positives = 85/148 (57%), Gaps = 6/148 (4%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N +M AL EA+ AA E+P+GAV V + +II R N +D T HAEILAI+ CR Sbjct: 7 NQYMIAALVEAKKAAAIGEVPIGAVVVHDQQIIGRGYNLRETTQDATQHAEILAIQAACR 66 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL---AT 121 L L + L+VTLEPC MCA A+ ARI Y+GA++PK G GT FY L Sbjct: 67 QLGTWRLEDCSLFVTLEPCPMCAGAMINARIATCYFGATDPKAG--VAGT-FYNLLEDTR 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + PGI S ++QDFF+ R Sbjct: 124 FNHQVAVVPGIQATASAALLQDFFRAIR 151 >gi|134094605|ref|YP_001099680.1| tRNA-specific adenosine deaminase [Herminiimonas arsenicoxydans] gi|133738508|emb|CAL61553.1| tRNA-specific adenosine deaminase [Herminiimonas arsenicoxydans] Length = 170 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 87/149 (58%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + ++M AL++A NA E+PVGAV V + ++I+ N+ D TAHAEI+A+R Sbjct: 8 VTQDEIWMRQALDQAHNAWALGEVPVGAVVVKDGQVIATGFNQPIGTHDPTAHAEIMALR 67 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 IL LP +LYVTLEPC MC+ A+ AR+ R+ +GAS+PK G + + Sbjct: 68 AAATILGNYRLPGCELYVTLEPCVMCSGAMMHARLARVVFGASDPKTGACGSIVNLFEQN 127 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ Q +++DFF ERR Sbjct: 128 QLNHHTQLTGGLMAQECGALLKDFFAERR 156 >gi|329666788|gb|AEB92736.1| cytosine/adenosine deaminase [Lactobacillus johnsonii DPC 6026] Length = 160 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 88/144 (61%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRI 65 +M A E+A+ A + E+P+GAV V + + G REL +D T HAE++AIR C+ Sbjct: 10 YMHLAFEQAKKAEEQGEVPIGAVVVDKDGNVIGEGYNRRELDEDATQHAEMIAIRQACKK 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L+ L + L++TLEPC MC+ AI +R+ +YYGA +PK G + + + +H Sbjct: 70 LNSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAAGSVIDLFKVEKFNHH 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P+IY G+ ++ Q+++DFF+E R Sbjct: 130 PKIYGGLFRDQASQMLKDFFREIR 153 >gi|304383698|ref|ZP_07366157.1| tRNA-specific adenosine deaminase [Prevotella marshii DSM 16973] gi|304335222|gb|EFM01493.1| tRNA-specific adenosine deaminase [Prevotella marshii DSM 16973] Length = 160 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 64/148 (43%), Positives = 83/148 (56%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM AL EA+ A EIPVGA+ V +I+SRA N L DVTAHAE+ AI Sbjct: 18 KTDEAFMRKALAEAEMAFEEGEIPVGAIIVCKGRILSRAHNLTETLHDVTAHAEMQAITA 77 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L LYVT+EPC MCA A++ A++ R+ YGAS+ K G + Y Sbjct: 78 AADALGGKYLTGCTLYVTVEPCPMCAGALAWAQLSRIVYGASDTK-----RGYRLYAPDV 132 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI + R+++Q FFKERR Sbjct: 133 LHPKTEVMGGILAEECRELMQRFFKERR 160 >gi|116511524|ref|YP_808740.1| hypothetical protein LACR_0760 [Lactococcus lactis subsp. cremoris SK11] gi|116107178|gb|ABJ72318.1| tRNA-adenosine deaminase [Lactococcus lactis subsp. cremoris SK11] Length = 155 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 65/144 (45%), Positives = 88/144 (61%), Gaps = 2/144 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-VTAHAEILAIRMGCRI 65 FM+ AL+EAQ AA E+P+G V V + +II+R NR REL T HAE+ AI + Sbjct: 11 FMTEALKEAQKAAENEEVPIGVVIVKDGEIIARDFNR-RELDGRATHHAEVCAIEAANQA 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L + L+VT+EPC MCA AI LARI ++Y+GA+NPK GG + Q +H Sbjct: 70 VGNWRLLDCALFVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQILEDKRLNHR 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 ++ GI E +I+QDFFK RR Sbjct: 130 VQVESGILEYECAKIMQDFFKNRR 153 >gi|47092339|ref|ZP_00230130.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes str. 4b H7858] gi|226225270|ref|YP_002759377.1| hypothetical protein Lm4b_02693 [Listeria monocytogenes Clip81459] gi|254824916|ref|ZP_05229917.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL J1-194] gi|255520888|ref|ZP_05388125.1| hypothetical protein LmonocFSL_06656 [Listeria monocytogenes FSL J1-175] gi|47019318|gb|EAL10060.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes str. 4b H7858] gi|225877732|emb|CAS06447.1| Conserved hypothetical proteins [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293594156|gb|EFG01917.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL J1-194] gi|328468199|gb|EGF39205.1| hypothetical protein LM1816_02662 [Listeria monocytogenes 1816] Length = 156 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 87/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 6 FMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 66 NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ S ++++ FF++ R Sbjct: 126 EVEAGLMEKESSEMLRSFFQDLR 148 >gi|262384051|ref|ZP_06077187.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|301310955|ref|ZP_07216884.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 20_3] gi|262294949|gb|EEY82881.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|300831018|gb|EFK61659.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 20_3] Length = 146 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 65/143 (45%), Positives = 85/143 (59%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+ AA E+PVGAV + NN+II+RA N+ L DVTAHAE+LAI +L Sbjct: 9 FMKQALVEARAAASEGEVPVGAVIICNNQIIARAHNQTECLNDVTAHAEMLAITAAAGVL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVT+EPC MCA AI A++ + YGAS+ K G + Q + H Sbjct: 69 GAKYLTNCSLYVTVEPCIMCAGAIGWAQLSTIVYGASDDKRGFSKFAPQAF-----HPKA 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI E+ + +Q FFK+RR Sbjct: 124 IIKKGILEKECAEEMQRFFKQRR 146 >gi|167771010|ref|ZP_02443063.1| hypothetical protein ANACOL_02364 [Anaerotruncus colihominis DSM 17241] gi|167666680|gb|EDS10810.1| hypothetical protein ANACOL_02364 [Anaerotruncus colihominis DSM 17241] Length = 151 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 65/145 (44%), Positives = 84/145 (57%), Gaps = 1/145 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM AL A AA R E+PVGAV V + +I+ NR K+ AHAE+ AI CR Sbjct: 4 NDFMGEALRLAGCAAERGEVPVGAVVVCDGQIVGTGFNRRETGKNALAHAELEAIDAACR 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L +LYVTLEPC MCA AI ARIRRL +GA +PK G + + F LA +H Sbjct: 64 RLGGWRLHRCELYVTLEPCPMCAGAIINARIRRLVFGARDPKSGCFGSVSDFNALAF-NH 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 P++ G+ + QI+ FF++ R Sbjct: 123 KPQVVCGVRGEECAQILSAFFQKLR 147 >gi|94310515|ref|YP_583725.1| tRNA-adenosine deaminase [Cupriavidus metallidurans CH34] gi|93354367|gb|ABF08456.1| tRNA-specific adenosine deaminase [Cupriavidus metallidurans CH34] Length = 189 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 87/144 (60%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M+ AL+EA+ A E+PVGAV V ++KII+R N D +AHAE+ A+R Sbjct: 12 ERDRFYMAAALDEARLAEAAGEVPVGAVVVWDDKIIARGHNLPIRSVDPSAHAEMQALRA 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 ++L +PE ++YVTLEPC MC+ AI AR+R + +GA++PK G + + AT Sbjct: 72 AAKVLGNYRMPECEIYVTLEPCPMCSGAILHARLRHVVFGATDPKTGAAGSVVDLFAQAT 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 +H + G+ Q+++DFF Sbjct: 132 LNHQTTLTRGVMADECGQLLRDFF 155 >gi|83944514|ref|ZP_00956966.1| cytidine and deoxycytidylate deaminase family protein [Sulfitobacter sp. EE-36] gi|83844620|gb|EAP82505.1| cytidine and deoxycytidylate deaminase family protein [Sulfitobacter sp. EE-36] Length = 151 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 77/144 (53%), Positives = 101/144 (70%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +MS ALEEA+ AA R E+PVGAV V + +++++AGNR REL D TAHAE+LAIR C Sbjct: 6 YMSQALEEARAAAARGEVPVGAVIVAPDGQVVAQAGNRTRELNDPTAHAEVLAIRAACAA 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 E L LYVTLEPC MCAAAIS AR+ RLYYGAS+PK GG+ G + ++ CHH+ Sbjct: 66 AGSERLGGHALYVTLEPCAMCAAAISAARVARLYYGASDPKSGGVAQGARVFSHEQCHHA 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P++Y I+ S +++ FF E+R Sbjct: 126 PDVYDAIAAPESEDLLKAFFAEKR 149 >gi|73541535|ref|YP_296055.1| tRNA-adenosine deaminase [Ralstonia eutropha JMP134] gi|72118948|gb|AAZ61211.1| tRNA-adenosine deaminase [Ralstonia eutropha JMP134] Length = 177 Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 85/143 (59%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 ++ A++EA+ A E+PVGAV V N+ II+R N + D +AHAE+ A+R ++L Sbjct: 16 YLRAAMDEARLAEAAGEVPVGAVVVWNDAIIARGHNLPIKSMDPSAHAEMQALRAAAQVL 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 +PE +LYVTLEPC MC+ AI AR+R + +GAS+PK G + + A +H Sbjct: 76 GNYRMPECELYVTLEPCAMCSGAILHARLRHVVFGASDPKTGAAGSVVNLFEQAQLNHQT 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I G+ Q+++DFF RR Sbjct: 136 TITGGVLADECGQMLKDFFGARR 158 >gi|268318938|ref|YP_003292594.1| hypothetical protein FI9785_445 [Lactobacillus johnsonii FI9785] gi|262397313|emb|CAX66327.1| conserved hypothetical proteins [Lactobacillus johnsonii FI9785] Length = 160 Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 88/144 (61%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRI 65 +M A E+A+ A + E+P+GAV V + + G REL +D T HAE++AIR C+ Sbjct: 10 YMHLAFEQAKKAEEQGEVPIGAVVVDKDGNVIGEGYNRRELDEDATQHAEMIAIRQACKK 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L+ L + L++TLEPC MC+ AI +R+ +YYGA +PK G + + + +H Sbjct: 70 LNSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAAGSVIDLFKVEKFNHH 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P+IY G+ ++ Q+++DFF+E R Sbjct: 130 PKIYGGLFRNQAAQMLKDFFREIR 153 >gi|241895205|ref|ZP_04782501.1| tRNA-adenosine deaminase [Weissella paramesenteroides ATCC 33313] gi|241871511|gb|EER75262.1| tRNA-adenosine deaminase [Weissella paramesenteroides ATCC 33313] Length = 175 Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 55/145 (37%), Positives = 83/145 (57%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL EA+ AA+ E+P+GAV V + +++SRA N ++D + HAE AI R Sbjct: 11 DYFMGLALAEARKAAMIGEVPIGAVVVQDGQVVSRAFNLREHMQDGSQHAEYQAIIEANR 70 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L LP+ L+VTLEPC MCA I R+ +YYGA +PK GG+ + + T +H Sbjct: 71 QLHSWRLPDAQLFVTLEPCIMCAGLIQQTRLTDVYYGADDPKAGGVTSMYELLTDERLNH 130 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + +++ FFK R Sbjct: 131 QVNVHAGVRADEASSLLKQFFKAVR 155 >gi|227888770|ref|ZP_04006575.1| nucleoside deaminase [Lactobacillus johnsonii ATCC 33200] gi|227850607|gb|EEJ60693.1| nucleoside deaminase [Lactobacillus johnsonii ATCC 33200] Length = 160 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 88/144 (61%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRI 65 +M A E+A+ A + E+P+GAV V + + G REL +D T HAE++AIR C+ Sbjct: 10 YMHLAFEQAKKAEEQGEVPIGAVVVDKDGNVIGEGYNRRELDEDATQHAEMIAIRQACKK 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L+ L + L++TLEPC MC+ AI +R+ +YYGA +PK G + + + +H Sbjct: 70 LNSWRLVDCSLFITLEPCPMCSGAIINSRLVEVYYGAFDPKAGAAGSVIDLFKVEKFNHH 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P+IY G+ ++ Q+++DFF+E R Sbjct: 130 PKIYGGLFRDQAAQMLKDFFREIR 153 >gi|88801642|ref|ZP_01117170.1| putative cytosine/adenosine deaminase [Polaribacter irgensii 23-P] gi|88782300|gb|EAR13477.1| putative cytosine/adenosine deaminase [Polaribacter irgensii 23-P] Length = 149 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 66/144 (45%), Positives = 83/144 (57%), Gaps = 8/144 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A +EA+NA + EIPVGAV VL ++II+RA N L DVTAHAE+ A L Sbjct: 10 FMKKAFQEAENAFDKGEIPVGAVIVLKDQIIARAHNLTETLNDVTAHAEMQAFTSAADFL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-ATCHHS 125 + L E LYVTLEPC MCA A A+I ++ YGAS P+ G F L T H Sbjct: 70 GGKYLKECVLYVTLEPCQMCAGASYWAQIGKIVYGASEPERG-------FKNLQTTLHPK 122 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 ++ GI E QI++ FF E+R Sbjct: 123 TKVIGGILENECSQILKRFFIEKR 146 >gi|303237080|ref|ZP_07323650.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella disiens FB035-09AN] gi|302482467|gb|EFL45492.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella disiens FB035-09AN] Length = 150 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 62/149 (41%), Positives = 84/149 (56%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +KK +M AL A+ A + E+PVGAV V N IISRA N L DVTAHAE+ AI Sbjct: 7 IKKDEYYMGRALAMAEEAFEKGEVPVGAVIVCRNHIISRAHNLTEALTDVTAHAEMQAIT 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M L + L + LYVT+EPC MCA A+ ++I+R+ YG S+ K G + Sbjct: 67 MSANELGGKYLQDCTLYVTVEPCIMCAGALGWSQIKRIVYGCSDDK-----RGFSLHAPK 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E+ + ++Q FFKERR Sbjct: 122 ALHPKTVVTKGVREEECKALMQRFFKERR 150 >gi|261367117|ref|ZP_05980000.1| tRNA-specific adenosine deaminase [Subdoligranulum variabile DSM 15176] gi|282571240|gb|EFB76775.1| tRNA-specific adenosine deaminase [Subdoligranulum variabile DSM 15176] Length = 153 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 62/146 (42%), Positives = 89/146 (60%), Gaps = 4/146 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALEEA+ AA E+PVGAV + +I++RA N K+ T HAE+LAI C+ L Sbjct: 6 LMQVALEEARIAAALGEVPVGAVIAKDGEIVARAHNLRERGKNATYHAELLAIDAACKAL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + +L+VTLEPC MC+ AI +R+RR+ YGA +PK G T + L HH P Sbjct: 66 GGWRLWQCELFVTLEPCPMCSGAIINSRLRRVVYGARDPKAGCCGGLTDLFALPFNHH-P 124 Query: 127 EIYPGISEQRSRQIIQDFF---KERR 149 I G+ ++ ++ ++QDFF +E+R Sbjct: 125 VIEQGLLQEDAQALLQDFFVMLREKR 150 >gi|289577296|ref|YP_003475923.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter italicus Ab9] gi|289527009|gb|ADD01361.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter italicus Ab9] Length = 148 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 59/145 (40%), Positives = 80/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM A+ EA + E+PVGAV V +++II R N+ DVTAHAEI+AI+ C+ Sbjct: 3 NKFMKAAILEANKSYQLREVPVGAVIVKDDQIIGRGFNQKEATNDVTAHAEIMAIKEACK 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + +YVTLEPC MCA AI ARI+R+Y G + K G Sbjct: 63 TLGSWRLDDCSIYVTLEPCPMCAGAILEARIKRVYIGTESDKSGAAGTVINLLNNPDLGS 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+Y GI E + ++++FFK R Sbjct: 123 KTEVYFGIMEDECKMLLENFFKTLR 147 >gi|163745925|ref|ZP_02153284.1| cytidine and deoxycytidylate deaminase family protein [Oceanibulbus indolifex HEL-45] gi|161380670|gb|EDQ05080.1| cytidine and deoxycytidylate deaminase family protein [Oceanibulbus indolifex HEL-45] Length = 145 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 59/130 (45%), Positives = 85/130 (65%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+PVGAV V +I++ AGN R D TAHAE+LA+R C + E L LYVT Sbjct: 14 RGEVPVGAVVVSPAGQIVAAAGNETRARNDPTAHAEMLALRAACAAVGSERLIGHALYVT 73 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA AI+ AR+ RL+YGA++PK GG+ G + ++ CHH P+++ GI+ + + Sbjct: 74 LEPCAMCAGAIAAARVERLFYGAADPKSGGVAQGARVFSHPQCHHVPQVFDGIAGREAED 133 Query: 140 IIQDFFKERR 149 ++ FF+ +R Sbjct: 134 LLIKFFQAKR 143 >gi|153006601|ref|YP_001380926.1| CMP/dCMP deaminase [Anaeromyxobacter sp. Fw109-5] gi|152030174|gb|ABS27942.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter sp. Fw109-5] Length = 150 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 60/142 (42%), Positives = 82/142 (57%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ AA R E+PVGAVAV +++ R N D TAHAE+LAI+ R L Sbjct: 1 MQEALALARGAAERGEVPVGAVAVFEGRVVGRGANAREAAHDPTAHAELLAIQDAARALG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L V +YVTLEPC MCA A+ LARI RL Y AS+PK G + + T +H Sbjct: 61 RWRLTGVTVYVTLEPCAMCAGAMVLARIDRLVYAASDPKAGAVGSLVDLSTDPRLNHRFP 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ + + +++ FF+ RR Sbjct: 121 VDKGLLAEEAGDLLRAFFRARR 142 >gi|290891900|ref|ZP_06554897.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL J2-071] gi|290558494|gb|EFD92011.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL J2-071] Length = 156 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 86/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 6 FMQQALEEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 66 NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ S ++++ FF+ R Sbjct: 126 EVEAGLMEKESSEMLKSFFQNLR 148 >gi|125974987|ref|YP_001038897.1| tRNA-adenosine deaminase [Clostridium thermocellum ATCC 27405] gi|256003803|ref|ZP_05428790.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum DSM 2360] gi|281418595|ref|ZP_06249614.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum JW20] gi|125715212|gb|ABN53704.1| tRNA-adenosine deaminase [Clostridium thermocellum ATCC 27405] gi|255992141|gb|EEU02236.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum DSM 2360] gi|281407679|gb|EFB37938.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum JW20] gi|316939149|gb|ADU73183.1| CMP/dCMP deaminase zinc-binding protein [Clostridium thermocellum DSM 1313] Length = 161 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA A +NE P+GAV V + II+R N+ D T HAE+ IR C L Sbjct: 11 FMREALKEAYKAYGKNETPIGAVMVKDGSIIARGHNQKELTNDPTNHAEMAVIREACAKL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + DLYVTLEPCTMCA AI AR+ RL+ G+ +PK G + + +H Sbjct: 71 GTWRLNDCDLYVTLEPCTMCAGAIIQARVGRLFIGSLDPKAGAAGSVIDVLKVDAFNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI ++ +I+++FFKE R Sbjct: 131 EVTYGILQEECSEILKNFFKELR 153 >gi|330686241|gb|EGG97853.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus epidermidis VCU121] Length = 168 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 88/149 (59%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ +M A+EEA+ A L E+P+GA+ V NN +I+RA N L+ TAHAE LAI Sbjct: 1 METDEYYMKIAIEEAKKAELLGEVPIGAIIVKNNHVIARAHNMRETLQQPTAHAEHLAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L + LYVTLEPC MCA I ++RI + YGA++PKGG + Sbjct: 61 RAAKVLGSWRLEDCTLYVTLEPCVMCAGTIVMSRIPYIKYGAADPKGGCSGSLMNLLNQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E++ ++++FF++ R Sbjct: 121 DFNHRAQVESGLLEEQCGDLLRNFFRKLR 149 >gi|314937113|ref|ZP_07844460.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus hominis subsp. hominis C80] gi|313655732|gb|EFS19477.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus hominis subsp. hominis C80] Length = 163 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M CA+EEA+ A E+P+GAV V +N+IISRA N L+ TAHAE LAI Sbjct: 1 MTNDEFYMKCAIEEAKKARQLGEVPIGAVIVKDNEIISRAHNLRETLQQPTAHAEHLAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +++ L + LYVTLEPC MCA + ++RI R+ YGA +PKGG + Sbjct: 61 RAAKVIGSWRLEDCTLYVTLEPCVMCAGTVVMSRIPRVVYGAMDPKGGCSGSLMDLLQQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ +++ FF++ R Sbjct: 121 QFNHRAIVEQGVLEEECSNLLRQFFRDLR 149 >gi|308275014|emb|CBX31613.1| tRNA-specific adenosine deaminase [uncultured Desulfobacterium sp.] Length = 156 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 59/150 (39%), Positives = 88/150 (58%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 M + +M A++EA+ A E+P+GA+ V +++S A N L D AHAEILA+ Sbjct: 5 MNEHEAYMELAIKEAKKAGQNCEVPIGAILVDEKGQVVSLAHNSTITLCDPCAHAEILAL 64 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R C I+ L + +YVT+EPC MC AI AR+++L +GA +PK G + F Sbjct: 65 RNACSIVGNYRLLNMTIYVTIEPCIMCMGAIIHARLKKLVFGAYDPKWGAAGSLYNFAND 124 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI PGI E+ + ++QDFFK++R Sbjct: 125 NRLNHKTEIIPGICEKECKDLMQDFFKKKR 154 >gi|254827285|ref|ZP_05231972.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL N3-165] gi|258599666|gb|EEW12991.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL N3-165] Length = 156 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 86/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 6 FMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 66 NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ S ++++ FF+ R Sbjct: 126 EVEAGLMEKESSEMLKSFFQNLR 148 >gi|330998189|ref|ZP_08322015.1| cytidine and deoxycytidylate deaminase zinc-binding region [Paraprevotella xylaniphila YIT 11841] gi|329568881|gb|EGG50679.1| cytidine and deoxycytidylate deaminase zinc-binding region [Paraprevotella xylaniphila YIT 11841] Length = 144 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 83/149 (55%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M ALEEA+ A +EIPVGAV V ++I++RA N L D TAHAE+ I Sbjct: 1 MADDAFYMKKALEEARRAYDEDEIPVGAVVVCGDRILARAHNLTETLTDATAHAEMQVIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L E LYVTLEPC MCA AI A+++RL YGA++ K G + + Sbjct: 61 AAANALGGKYLNECTLYVTLEPCVMCAGAIGWAQVKRLVYGATDEK-----RGYKMFAPQ 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ + +++DFFK +R Sbjct: 116 AIHPRTEVVSGVMADEAVALLKDFFKGKR 144 >gi|325954716|ref|YP_004238376.1| CMP/dCMP deaminase zinc-binding protein [Weeksella virosa DSM 16922] gi|323437334|gb|ADX67798.1| CMP/dCMP deaminase zinc-binding protein [Weeksella virosa DSM 16922] Length = 146 Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 63/143 (44%), Positives = 83/143 (58%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EAQ A R+EIPVGA+ V NKII++ N L DVTAHAE+ AI L Sbjct: 10 FMRKALQEAQVAFDRDEIPVGALIVSQNKIIAKTHNLTETLTDVTAHAEMQAITSAANYL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC MCA A+ ++I R+ GAS+ K G L H Sbjct: 70 GGKYLKDCTLYVTLEPCVMCAGALYWSQISRIVIGASDEKRGFRSQ------LVKLHPKT 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ + S ++IQ FFK++R Sbjct: 124 QITEGVLAKESTELIQKFFKDKR 146 >gi|324324011|gb|ADY19271.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 166 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+ R Sbjct: 129 EVVAGVLEEECGTLLTNFFRALR 151 >gi|228475284|ref|ZP_04060009.1| tRNA-specific adenosine deaminase [Staphylococcus hominis SK119] gi|228270749|gb|EEK12158.1| tRNA-specific adenosine deaminase [Staphylococcus hominis SK119] Length = 162 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M CA+EEA+ A E+P+GAV V +N IISRA N L+ TAHAE LAI Sbjct: 1 MTNDEFYMKCAIEEAKKARQLGEVPIGAVIVKDNDIISRAHNLRETLQQPTAHAEHLAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +++ L + LYVTLEPC MCA + ++RI R+ YGA +PKGG + Sbjct: 61 RAAKVIGSWRLEDCTLYVTLEPCVMCAGTVVMSRIPRVVYGAMDPKGGCSGSLMDLLQQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ +++ FF++ R Sbjct: 121 QFNHHAIVEQGVLEEECSNLLRQFFRDLR 149 >gi|229194412|ref|ZP_04321217.1| hypothetical protein bcere0001_100 [Bacillus cereus m1293] gi|228589068|gb|EEK47081.1| hypothetical protein bcere0001_100 [Bacillus cereus m1293] Length = 166 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI C+ L Sbjct: 9 FMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 69 GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+ R Sbjct: 129 EVVAGVLEEECGTLLTNFFRALR 151 >gi|311070665|ref|YP_003975588.1| tRNA specific adenosine deaminase [Bacillus atrophaeus 1942] gi|310871182|gb|ADP34657.1| tRNA specific adenosine deaminase [Bacillus atrophaeus 1942] Length = 161 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K +M A++EA+ A E+P+GAV V+N+ I++RA N + AHAE+LAI Sbjct: 1 MTKDEFYMLEAIKEAKKAEEIGEVPIGAVLVMNDDIVARAHNLRETEQRSIAHAEMLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR L L LYVTLEPC MCA A+ L+R+ R+ +GA +PKGG Sbjct: 61 EACRTLGTWRLEGASLYVTLEPCPMCAGAVVLSRVDRVVFGAFDPKGGCSGTLMNLLQEE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ Q++ DFF+ R Sbjct: 121 RFNHQAEVVSGVLEKECGQMLSDFFRNLR 149 >gi|150387879|ref|YP_001317928.1| CMP/dCMP deaminase, zinc-binding [Alkaliphilus metalliredigens QYMF] gi|149947741|gb|ABR46269.1| CMP/dCMP deaminase, zinc-binding [Alkaliphilus metalliredigens QYMF] Length = 151 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +MS ALEEA+ A E+P+GA+ + NK+I+ A N D TAHAEI+AI+ CR L Sbjct: 5 YMSLALEEAKKAYELGEVPIGAIILRENKVIAAAHNLRESHHDATAHAEIIAIQAACRRL 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L+VT+EPC MCA AI +RI R+ GA +PK G + +H Sbjct: 65 GGWRLTNSTLFVTIEPCPMCAGAILQSRIDRVVIGAMDPKAGACGSIINLLNNNQFNHQT 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ E QI++DFFK R Sbjct: 125 EIVTGVLEDECSQIMKDFFKSLR 147 >gi|302334869|ref|YP_003800076.1| tRNA-adenosine deaminase [Olsenella uli DSM 7084] gi|301318709|gb|ADK67196.1| tRNA-adenosine deaminase [Olsenella uli DSM 7084] Length = 163 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA AA +E+P+GAV V ++I+RA NR D +AHAE A+ R L Sbjct: 15 FMGLALEEACIAATEDEVPIGAVVVCGGEVIARAHNRRETDGDPSAHAEFSAMVQAARAL 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +YVTLEPC MCA + AR+ R YGA++PKGG + A +HS Sbjct: 75 GRWRLTGCTVYVTLEPCLMCAGLMVNARVDRCVYGAADPKGGAVGTLYDVSDDARLNHSF 134 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E QI++DFF+ RR Sbjct: 135 PVTAGVLEDECAQILRDFFRVRR 157 >gi|147676360|ref|YP_001210575.1| cytosine/adenosine deaminases [Pelotomaculum thermopropionicum SI] gi|146272457|dbj|BAF58206.1| cytosine/adenosine deaminases [Pelotomaculum thermopropionicum SI] Length = 156 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 63/143 (44%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA+ A E+PVGAV V + +II R N LKD TAHAEILA+R RI+ Sbjct: 9 YMREALAEAKKAYGLGEVPVGAVVVRDGEIIGRGHNLRETLKDSTAHAEILAMREAARIV 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LY T+EPC MCA AI R+ L YGA++PK G + +H Sbjct: 69 GDWRLNGTVLYSTIEPCAMCAGAIIQFRVATLVYGAADPKAGAAGSVIDVIGQPRFNHRV 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ R+IIQ FF+E R Sbjct: 129 EVVSGVLEEECREIIQKFFRELR 151 >gi|225181888|ref|ZP_03735323.1| CMP/dCMP deaminase zinc-binding [Dethiobacter alkaliphilus AHT 1] gi|225167402|gb|EEG76218.1| CMP/dCMP deaminase zinc-binding [Dethiobacter alkaliphilus AHT 1] Length = 158 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 6/146 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EAQ A + EIP+GAV V + II+R NR EL D TAHAEIL +R R L Sbjct: 6 FMREALKEAQLAFEKGEIPIGAVLVRDGNIIARDHNRREELDDPTAHAEILVLREAGRTL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT---CH 123 LP LYVT+EPC MCA + AR+ R+ YGA++ K G + + YT+ + Sbjct: 66 GGWRLPNTTLYVTIEPCPMCAGGLVQARVARVVYGAADIKAGAVHS---LYTVTEDERLN 122 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ + I++ FF+ RR Sbjct: 123 HRLEVTGGVLAEECADIMRTFFRSRR 148 >gi|50085441|ref|YP_046951.1| putative deaminase [Acinetobacter sp. ADP1] gi|49531417|emb|CAG69129.1| putative deaminase [Acinetobacter sp. ADP1] Length = 174 Score = 113 bits (283), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 62/144 (43%), Positives = 81/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A E+A AA NE+PVGAV V NK+I N L D TAHAEI AIRM C + Sbjct: 12 WMQLAYEQAVRAAEHNEVPVGAVIVSQNKVIGSGYNAPITLNDPTAHAEIRAIRMACESV 71 Query: 67 SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 LPE LYVTLEPCTMC A+ ARI R+ + + PK G + + Q + +H Sbjct: 72 KNYRLPEDATLYVTLEPCTMCVGALVHARIHRVVFATTEPKAGSLVSARQLLNMGYYNHK 131 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 I G + + + + DFF++RR Sbjct: 132 FLIEHGCMQAQCSKQLSDFFRKRR 155 >gi|326796823|ref|YP_004314643.1| CMP/dCMP deaminase zinc-binding protein [Marinomonas mediterranea MMB-1] gi|326547587|gb|ADZ92807.1| CMP/dCMP deaminase zinc-binding protein [Marinomonas mediterranea MMB-1] Length = 159 Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 67/145 (46%), Positives = 88/145 (60%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N +M AL A+ AA +EIPVGA+ V N++II R NR D TAHAEI AIR C Sbjct: 4 NDWMKAALALAEEAAQESEIPVGAIVVQNDEIIGRGFNRPITTCDPTAHAEIQAIRDACA 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 ++ LP LYVTLEPC+MCA AI ARI ++ YGA+ PK G E+ +F+ A +H Sbjct: 64 NVNNYRLPGATLYVTLEPCSMCAGAIVHARIEKVVYGATEPKSGVTESQGRFFEQAFLNH 123 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + + Q + FFK RR Sbjct: 124 KVEVVGGVLAEEASQQLTAFFKFRR 148 >gi|196228535|ref|ZP_03127402.1| CMP/dCMP deaminase zinc-binding [Chthoniobacter flavus Ellin428] gi|196227938|gb|EDY22441.1| CMP/dCMP deaminase zinc-binding [Chthoniobacter flavus Ellin428] Length = 156 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 61/149 (40%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM AL +A+ A + E+P+GAV V +II+RA N+ LKD TAHAE+LAI Sbjct: 7 LHSDTYFMGEALRQARRAWEQEEVPIGAVIVHQGRIIARACNQVEVLKDATAHAEMLAIT 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L L E DLYVT EPC MCA A+ R++R+ +G +PK G + Q Sbjct: 67 QAESVLGDWRLNECDLYVTKEPCPMCAGALVHVRMKRVVFGCPSPKDGAGGSLLQILQHP 126 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +HS EI G+ + ++Q FF+ERR Sbjct: 127 KLNHSCEITTGVRQDECAAMLQAFFRERR 155 >gi|288802991|ref|ZP_06408427.1| cytidine/deoxycytidylate deaminase family protein [Prevotella melaninogenica D18] gi|302345191|ref|YP_003813544.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella melaninogenica ATCC 25845] gi|288334508|gb|EFC72947.1| cytidine/deoxycytidylate deaminase family protein [Prevotella melaninogenica D18] gi|302149710|gb|ADK95972.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella melaninogenica ATCC 25845] Length = 150 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/148 (43%), Positives = 84/148 (56%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 KK FM AL EA+ A EIP+GAV V ++II+RA N L DVTAHAE+ AI M Sbjct: 8 KKDLYFMQRALAEAEAAYKEGEIPIGAVVVCRDRIIARAHNLTETLNDVTAHAEMQAITM 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L + LYVT+EPC MCA AI A+++R+ YG + K G E Y Sbjct: 68 AANELGGKYLQDCTLYVTVEPCIMCAGAIGWAQLQRIVYGCPDEKRGYHE-----YAPKA 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E+ R ++Q FF+ERR Sbjct: 123 FHPKANVTYGVMEEECRALMQRFFQERR 150 >gi|300172664|ref|YP_003771829.1| tRNA-specific adenosine deaminase [Leuconostoc gasicomitatum LMG 18811] gi|299887042|emb|CBL91010.1| tRNA-specific adenosine deaminase [Leuconostoc gasicomitatum LMG 18811] Length = 165 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 62/145 (42%), Positives = 83/145 (57%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL EA+ A E+P+GAV V +N II+RA N + TAHAE+LAI R Sbjct: 13 DYFMQVALNEAKFAENDGEVPIGAVIVKDNVIIARAHNHREAEQMATAHAELLAIESANR 72 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 +LS L + L+VTLEPC MCA AI ARI +YYGA + KGGG + Q +H Sbjct: 73 LLSSWRLEDTALFVTLEPCIMCAGAIINARIPSVYYGAEDSKGGGTRSLYQLLEDDRLNH 132 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 +++ I ++Q FFK+ R Sbjct: 133 RADVHTNIRGDEGGALLQHFFKKIR 157 >gi|313112820|ref|ZP_07798467.1| cytidine and deoxycytidylate deaminase zinc-binding region [Faecalibacterium cf. prausnitzii KLE1255] gi|310624890|gb|EFQ08198.1| cytidine and deoxycytidylate deaminase zinc-binding region [Faecalibacterium cf. prausnitzii KLE1255] Length = 160 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 86/143 (60%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALEEA+ AA E+PVGAV N ++++ A N K+ HAE+LAI C+ L Sbjct: 6 LMGLALEEARKAAALGEVPVGAVVARNGEVVAAAHNTRETEKNALHHAELLAIDAACKKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E +L+VTLEPC MCA AI +RIRR+ YGA++ K G + T + + HH P Sbjct: 66 GGWRLWECELFVTLEPCPMCAGAIINSRIRRVVYGAADTKAGCCGSVTDLFAMPFNHH-P 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + +++++Q FFK+ R Sbjct: 125 VVEQGLRAEEAQELLQAFFKDLR 147 >gi|58039265|ref|YP_191229.1| cytosine deaminase [Gluconobacter oxydans 621H] gi|58001679|gb|AAW60573.1| Cytosine deaminase [Gluconobacter oxydans 621H] Length = 168 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 89/143 (62%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+ A+ AA E+PVGAV + + +++ A N D +AHAE+LA+R L Sbjct: 16 MQIALQAAREAASCGEVPVGAVVLAPDGNVLAVARNHVEGAHDASAHAELLAMREAATRL 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPC+MCAAAI RI R+ +GA +PKGGG+E+G + + +C H P Sbjct: 76 KSPRLTDCTLVVTLEPCSMCAAAIVHFRIGRVVFGAYDPKGGGVEHGPRIFERPSCLHRP 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ + ++++ FF++ R Sbjct: 136 EVIGGVCEREASEMLKAFFRKLR 158 >gi|226328060|ref|ZP_03803578.1| hypothetical protein PROPEN_01951 [Proteus penneri ATCC 35198] gi|225203764|gb|EEG86118.1| hypothetical protein PROPEN_01951 [Proteus penneri ATCC 35198] Length = 176 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+E+A A EIPVGAV V++NKII++ N + D TAHAEI+A+R G + L Sbjct: 10 WMHKAIEQAHKAQEIGEIPVGAVLVVDNKIIAKGWNHSIIDNDPTAHAEIMALRKGGKHL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LY+TLEPC MCA AI +R++R+ YGAS+ K G + +H Sbjct: 70 QNYRLLDATLYITLEPCVMCAGAIVHSRVKRVVYGASDLKTGAAGSFIDILQHPGMNHKV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q++ FFK RR Sbjct: 130 EITSGVLGEECSQLLSQFFKMRR 152 >gi|327312523|ref|YP_004327960.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella denticola F0289] gi|326945985|gb|AEA21870.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella denticola F0289] Length = 144 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 62/149 (41%), Positives = 83/149 (55%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK+ +M AL+EA A EIPVGAV V ++II+RA N L DVTAHAE+ AI Sbjct: 1 MKRDLYYMQRALDEAGAAYREGEIPVGAVVVCRDRIIARAHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M L + L + LYVT+EPC MCA AI A+ RR+ YG + K G Y Sbjct: 61 MAAGELGGKYLQDCTLYVTVEPCVMCAGAIGWAQFRRIVYGCPDEK-----RGYHLYAPK 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ + + ++Q FF+ERR Sbjct: 116 ALHPRADVTYGVMGEECKALMQRFFQERR 144 >gi|85057886|ref|YP_456802.1| cytosine deaminase [Aster yellows witches'-broom phytoplasma AYWB] gi|42632638|gb|AAS22250.1| cytosine deaminase [Aster yellows witches'-broom phytoplasma] gi|84789991|gb|ABC65723.1| cytosine deaminase [Aster yellows witches'-broom phytoplasma AYWB] Length = 161 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 63/148 (42%), Positives = 84/148 (56%), Gaps = 11/148 (7%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EAQ A L+ E+P+GA+AVLN KII+RA N K HAE LA+ + + Sbjct: 11 FMKEALKEAQKAYLKEEVPIGAIAVLNQKIIARAHNNRNTKKLFFGHAEFLALIKAGKKI 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +V LYVTLEPC MC AI A I+ LYYG S IE F +++ + P Sbjct: 71 NSRFLNDVSLYVTLEPCLMCTGAIIQAGIKNLYYGTS------IEKSYSFNDMSSIQNMP 124 Query: 127 -----EIYPGISEQRSRQIIQDFFKERR 149 I G+ Q S Q+++ FF+E R Sbjct: 125 FMDKLNIQSGLLAQESIQLLKKFFQELR 152 >gi|258510122|ref|YP_003183556.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257476848|gb|ACV57167.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 161 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 59/137 (43%), Positives = 80/137 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE A+ AA E+PVGAV V N +I+ NR +D TAHAE+LAI R L Sbjct: 10 FMRRALELAEEAARWGEVPVGAVVVENGRIVGEGFNRRETWRDGTAHAEMLAIEEASRRL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA AI L+R++R+ YGA++ KGG + + + +H+P Sbjct: 70 GGWRLTNCVLYVTLEPCPMCAGAIVLSRVQRVVYGATDAKGGAVASKVRLLEPGLWNHAP 129 Query: 127 EIYPGISEQRSRQIIQD 143 +I GI +++ D Sbjct: 130 QITSGILADDCAKLLTD 146 >gi|16801927|ref|NP_472195.1| hypothetical protein lin2867 [Listeria innocua Clip11262] gi|16415402|emb|CAC98093.1| lin2867 [Listeria innocua Clip11262] Length = 154 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 58/145 (40%), Positives = 85/145 (58%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI C+ Sbjct: 4 DFFMQQALEEAKKAREIGEVPIGAVVVLDGEIIGRAHNLRETTQNAVTHAELLAIEDACK 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H Sbjct: 64 HQNSWRLSGAELYVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDDRFNH 123 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + ++ G+ E S +++ FF+E R Sbjct: 124 TCKVEAGLLEAESSAMLKSFFRELR 148 >gi|296111508|ref|YP_003621890.1| hypothetical protein LKI_06910 [Leuconostoc kimchii IMSNU 11154] gi|295833040|gb|ADG40921.1| hypothetical protein LKI_06910 [Leuconostoc kimchii IMSNU 11154] Length = 164 Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 61/145 (42%), Positives = 84/145 (57%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL EAQ A E+P+GAV V +N+II+RA N + TAHAE++AI Sbjct: 13 DYFMQVALNEAQLADEAGEVPIGAVIVKDNEIIARAHNHREAHQLATAHAELVAIESANH 72 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 IL+ L L+VTLEPC MCA AI ARI +Y+GA++ KGGG + +H Sbjct: 73 ILNSWRLENTALFVTLEPCIMCAGAIINARIPTVYFGAADSKGGGTRSLYHLLEDDRLNH 132 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E++P I +++QDFF + R Sbjct: 133 RVEVHPDIRASEGGRLLQDFFGKIR 157 >gi|313616657|gb|EFR89453.1| tRNA-specific adenosine deaminase [Listeria innocua FSL S4-378] Length = 156 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/145 (40%), Positives = 85/145 (58%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI C+ Sbjct: 4 DFFMQQALEEAKKAREIGEVPIGAVVVLDGEIIGRAHNLRETTQNAVTHAELLAIEDACK 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H Sbjct: 64 HQNSWRLSGAELYVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDDRFNH 123 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + ++ G+ E S +++ FF+E R Sbjct: 124 TCKVEAGLLEAESSAMLKSFFRELR 148 >gi|227529514|ref|ZP_03959563.1| tRNA-adenosine deaminase [Lactobacillus vaginalis ATCC 49540] gi|227350599|gb|EEJ40890.1| tRNA-adenosine deaminase [Lactobacillus vaginalis ATCC 49540] Length = 173 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/140 (42%), Positives = 85/140 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA+ AAL +E+P+GAV KII R N + +DVT HAE+LAI C L Sbjct: 15 FMRAAIAEAKKAALLDEVPIGAVVTYQGKIIGRGHNMREKFQDVTYHAEMLAIMEACSYL 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + DLYVTLEPC MC+ AI ARIR ++YGA++PK G +++ +H Sbjct: 75 HSWRLEDCDLYVTLEPCMMCSGAIVNARIRNVFYGATDPKAGTVDSLYHLLGDDRLNHQA 134 Query: 127 EIYPGISEQRSRQIIQDFFK 146 + G+ ++ Q+++DFF+ Sbjct: 135 YVTAGVLGEQCSQMLKDFFR 154 >gi|150024385|ref|YP_001295211.1| cytosine/adenosine deaminase [Flavobacterium psychrophilum JIP02/86] gi|149770926|emb|CAL42391.1| Probable cytosine/adenosine deaminase [Flavobacterium psychrophilum JIP02/86] Length = 146 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 87/143 (60%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA A + EIPVGA+ V+NN+II+++ N L DVTAHAE+ AI L Sbjct: 10 FMRKALQEAYVAFDKEEIPVGAIVVINNRIIAKSHNLTELLNDVTAHAEMQAITASANFL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVTLEPC MCA A+ ++I ++ +GAS+P+ G + GTQ H Sbjct: 70 GGKYLTNCILYVTLEPCQMCAGALYWSQISKIVFGASDPQRGFTKMGTQL------HPKT 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI E +++++FF+++R Sbjct: 124 IVVNGILESECGELMKEFFRKKR 146 >gi|239825602|ref|YP_002948226.1| CMP/dCMP deaminase zinc-binding [Geobacillus sp. WCH70] gi|239805895|gb|ACS22960.1| CMP/dCMP deaminase zinc-binding [Geobacillus sp. WCH70] Length = 160 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+EEA+ A E+P+GA+ V + II+RA N + AHAEILAI Sbjct: 1 MVNDEYYMRLAIEEAKKAEQIGEVPIGAIIVQDGHIIARAHNLRETEQRAIAHAEILAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ + L + LYVTLEPC MCA AI LARI+R+ +GAS+PKGG Sbjct: 61 KACKEVGSWRLEDATLYVTLEPCAMCAGAIVLARIKRVVFGASDPKGGCAGTLMNLLQEG 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI + Q++ FF++ R Sbjct: 121 RFNHQAEVTSGILGEECGQMLSSFFRKLR 149 >gi|116491396|ref|YP_810940.1| tRNA-adenosine deaminase [Oenococcus oeni PSU-1] gi|116092121|gb|ABJ57275.1| tRNA-adenosine deaminase [Oenococcus oeni PSU-1] Length = 156 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 85/143 (59%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL++AQ A E+P+GAV V +N++I+ NR + TAHAE L I L Sbjct: 11 FMQLALKQAQTAFDEGEVPIGAVLVKDNQVIAADHNRKEQSGIATAHAEKLVIEGANCSL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC AI +RI RL+YGA++PK GG+ + + +H Sbjct: 71 GDWRLNDCSLFVTIEPCVMCCGAIIQSRIPRLFYGAADPKFGGVSSLYHLLEDSRSNHFV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+YP + ++S ++QDFF++ R Sbjct: 131 EVYPDVLAKQSANLMQDFFRKLR 153 >gi|297543592|ref|YP_003675894.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841367|gb|ADH59883.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 148 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/145 (40%), Positives = 79/145 (54%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM A+ EA + E+PVGAV V +++II R N+ D TAHAEI+AI+ C+ Sbjct: 3 NKFMKAAILEANKSYQLREVPVGAVIVKDDQIIGRGFNQKEATNDATAHAEIMAIKEACK 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + +YVTLEPC MCA AI ARI+R+Y G + K G Sbjct: 63 TLGSWRLDDCSMYVTLEPCPMCAGAILEARIKRVYIGTESDKSGAAGTVINLLNNPDLGS 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+Y GI E + ++++FFK R Sbjct: 123 KTEVYFGIMEDECKMLLENFFKTLR 147 >gi|116874087|ref|YP_850868.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742965|emb|CAK22089.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 156 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 85/143 (59%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 6 FMQQALAEAEKAQEIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 66 NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDNRFNHTC 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E S ++++ FF+E R Sbjct: 126 EVEAGLMEVESSEMLKKFFQELR 148 >gi|56697818|ref|YP_168189.1| cytidine and deoxycytidylate deaminase family protein [Ruegeria pomeroyi DSS-3] gi|56679555|gb|AAV96221.1| cytidine and deoxycytidylate deaminase family protein [Ruegeria pomeroyi DSS-3] Length = 159 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/143 (50%), Positives = 99/143 (69%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA+ A R E+PVGAV V + ++++ AGNR RE D TAHAEI+A+R C Sbjct: 7 MDQALAEARAAGARGEVPVGAVIVAPDGRVVAAAGNRTRETCDPTAHAEIVALRAACAAA 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPC MCAAA++ ARIRR+YYGA++PK GG+ +G + ++ HH+P Sbjct: 67 GSERLVGHDLYVTLEPCAMCAAALAAARIRRVYYGAADPKSGGVAHGARVFSHPQAHHAP 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GI + + ++++ FF ERR Sbjct: 127 EVYDGIGGEAAAELLRGFFAERR 149 >gi|227513704|ref|ZP_03943753.1| possible guanine deaminase [Lactobacillus buchneri ATCC 11577] gi|227522506|ref|ZP_03952555.1| possible guanine deaminase [Lactobacillus hilgardii ATCC 8290] gi|227083023|gb|EEI18335.1| possible guanine deaminase [Lactobacillus buchneri ATCC 11577] gi|227090328|gb|EEI25640.1| possible guanine deaminase [Lactobacillus hilgardii ATCC 8290] Length = 157 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 83/143 (58%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K FM AL EAQ A L E+P+GAV + +II R N L D AHAEI+AI Sbjct: 5 KDERFMKMALIEAQKAYLIGEVPIGAVITQDGQIIGRGHNLREHLNDGVAHAEIMAIEEA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 CR L L + +LYVT+EPC MC+ AI +RI R+ +GA + K G + + + + Sbjct: 65 CRYLRSWRLVDCELYVTIEPCLMCSGAIVNSRIDRVVFGARDKKAGAVRSLYRVLEDSRL 124 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 +H+ E++ G+ + +II+DFF Sbjct: 125 NHNVEVFEGVLQPACSKIIKDFF 147 >gi|227356250|ref|ZP_03840639.1| tRNA-specific adenosine deaminase [Proteus mirabilis ATCC 29906] gi|227163714|gb|EEI48630.1| tRNA-specific adenosine deaminase [Proteus mirabilis ATCC 29906] Length = 176 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+E+A A EIPVGAV V +NKII++ N + D TAHAEI+A+R G + L Sbjct: 10 WMHKAIEQAHKAQQLGEIPVGAVLVADNKIIAKGWNHSIIDNDPTAHAEIMALRKGGKHL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LY+TLEPC MCA AI +R++R+ YGAS+ K G + +H Sbjct: 70 QNYRLLDATLYITLEPCVMCAGAIVHSRVKRVVYGASDLKTGAAGSFIDILQHPGMNHKV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q++ FFK RR Sbjct: 130 EITSGVLGEECAQLLSQFFKMRR 152 >gi|86132518|ref|ZP_01051112.1| cytidine/deoxycytidylate deaminase family protein [Dokdonia donghaensis MED134] gi|85817079|gb|EAQ38263.1| cytidine/deoxycytidylate deaminase family protein [Dokdonia donghaensis MED134] Length = 149 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 63/143 (44%), Positives = 85/143 (59%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EAQ A + EIPVGAV V++N II+RA N L DVTAHAE+ AI + Sbjct: 10 FMKKALQEAQAAFDQGEIPVGAVVVIDNMIIARAHNLTERLTDVTAHAEMQAITSASNYI 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC MCA A+ ++I R+ YGAS+ + G + GT T H Sbjct: 70 GGKYLQQCTLYVTLEPCQMCAGALYWSQIGRIVYGASDERRGYEKMGT------TLHPKT 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI QI++ FF ++R Sbjct: 124 KVERGILAHECEQIMKRFFIDKR 146 >gi|332666401|ref|YP_004449189.1| CMP/dCMP deaminase zinc-binding protein [Haliscomenobacter hydrossis DSM 1100] gi|332335215|gb|AEE52316.1| CMP/dCMP deaminase zinc-binding protein [Haliscomenobacter hydrossis DSM 1100] Length = 148 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 84/143 (58%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EAQ A EIPVGAV N+II+R N +L DVTAHAEIL+I L Sbjct: 10 FMQEALKEAQLAFEEGEIPVGAVIACENRIIARGHNTTEKLLDVTAHAEILSITAASNYL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + + LP+ LYVTLEPC MCA AI A++ RL YGA + K G + G + H Sbjct: 70 NSKYLPDCTLYVTLEPCNMCAGAIFWAQMGRLVYGAGDEKRGFMRIGKELL-----HPKT 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + Q++++FF++ R Sbjct: 125 TLEYGVLHEECSQLLKEFFQKIR 147 >gi|126652937|ref|ZP_01725079.1| probable cytidine/deoxycytidylate deaminase family protein [Bacillus sp. B14905] gi|126590267|gb|EAZ84389.1| probable cytidine/deoxycytidylate deaminase family protein [Bacillus sp. B14905] Length = 170 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/144 (40%), Positives = 86/144 (59%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FM ALEEA+ AA+ E+P+GAV V + +II+RA N ++ T HAE++ I+ C+ Sbjct: 9 LFMKQALEEAKKAAILGEVPIGAVLVYDGEIIARAHNLRETTQNATTHAELMVIQEACQK 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L + LYVTLEPC MCA AI +R+ R+ YGA + K G +++ + A +H Sbjct: 69 IGSWRLEKTTLYVTLEPCPMCAGAILQSRVPRVVYGARDMKAGCVDSLYRLLNDARFNHE 128 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ GI QI+ DFF+ R Sbjct: 129 CEVSEGILAAECGQILTDFFRALR 152 >gi|325288211|ref|YP_004264392.1| tRNA-adenosine deaminase [Syntrophobotulus glycolicus DSM 8271] gi|324963612|gb|ADY54391.1| tRNA-adenosine deaminase [Syntrophobotulus glycolicus DSM 8271] Length = 148 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 85/143 (59%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL++A+ A ++E+P+GAV V N +I++ A N +D TAHAE+LAI+ + L Sbjct: 6 WMRLALKQAETALEKDEVPIGAVIVKNGEILALAHNEKETNQDPTAHAEMLAIKRAAQKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA AI +RI L YGA + KGG + + +H Sbjct: 66 GAWRLSGATLYVTLEPCPMCAGAIIQSRIETLVYGADDSKGGAVGSVLNVLQHQLWNHKV 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI E+ S ++++ FF+ +R Sbjct: 126 EIITGILEEESARLLKGFFRSKR 148 >gi|307267454|ref|ZP_07548942.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter wiegelii Rt8.B1] gi|306917535|gb|EFN47821.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter wiegelii Rt8.B1] Length = 148 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/145 (39%), Positives = 82/145 (56%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM A+ EA+ + E+PVGAV V + +II + N+ D TAHAEILAI+ C+ Sbjct: 3 NRFMEAAILEAKKSYQLGEVPVGAVIVKDGQIIGKGFNQKESSNDATAHAEILAIKEACK 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + +YVTLEPC MCA AI +RI+R+Y GA + + G + Sbjct: 63 TLGSWRLDDCSMYVTLEPCPMCAGAILESRIKRVYIGAESERTGAAGTVVDILNNSYLGS 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+Y GI E+ + +++DFF+ R Sbjct: 123 KTEVYFGIMEEECKTLLKDFFENLR 147 >gi|295402713|ref|ZP_06812655.1| CMP/dCMP deaminase zinc-binding [Geobacillus thermoglucosidasius C56-YS93] gi|312109168|ref|YP_003987484.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y4.1MC1] gi|294975244|gb|EFG50880.1| CMP/dCMP deaminase zinc-binding [Geobacillus thermoglucosidasius C56-YS93] gi|311214269|gb|ADP72873.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y4.1MC1] Length = 161 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+EEA+ A E+P+GA+ V +I+RA N + AHAEILAI C+ Sbjct: 7 YMRLAIEEAKQAEQIGEVPIGAIIVQGGNVIARAHNLRETAQRAIAHAEILAIDEACKKA 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI LARI+R+ +GAS+PKGG +H Sbjct: 67 GSWRLEDATLYVTLEPCAMCAGAIVLARIKRVVFGASDPKGGCAGTLMNLLQEGRFNHQA 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ ++ Q++ +FF++ R Sbjct: 127 EVIGGVLQEECGQMLSNFFRKLR 149 >gi|325856324|ref|ZP_08172040.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella denticola CRIS 18C-A] gi|325483508|gb|EGC86480.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella denticola CRIS 18C-A] Length = 144 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 62/149 (41%), Positives = 83/149 (55%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKK +M AL+EA A EIPVGAV V ++II+RA N L DVTAHAE+ AI Sbjct: 1 MKKDLYYMQRALDEAGAAYREGEIPVGAVVVCRDRIIARAHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M L + L + LYVT+EPC MCA AI A+ RR+ YG + K G Y Sbjct: 61 MAAGELGGKYLQDCTLYVTVEPCVMCAGAIGWAQFRRIVYGCPDEK-----RGYHLYAPK 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ + + +++ FF+ERR Sbjct: 116 ALHPRADVTYGVMGEECKALMRRFFQERR 144 >gi|169825638|ref|YP_001695796.1| hypothetical protein Bsph_0024 [Lysinibacillus sphaericus C3-41] gi|168990126|gb|ACA37666.1| Hypothetical yaaJ protein [Lysinibacillus sphaericus C3-41] Length = 170 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/144 (40%), Positives = 86/144 (59%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FM ALEEA+ AA+ E+P+GAV V + +II+RA N ++ T HAE++ I+ C+ Sbjct: 9 LFMKQALEEAKKAAILGEVPIGAVLVYDGEIIARAHNLRETTQNATTHAELMVIQEACQK 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L + LYVTLEPC MCA AI +R+ R+ YGA + K G +++ + A +H Sbjct: 69 IGSWRLEKTTLYVTLEPCPMCAGAILQSRVPRVVYGARDIKAGCVDSLYRILNDARFNHE 128 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ GI QI+ DFF+ R Sbjct: 129 CEVSEGILADECGQILTDFFRALR 152 >gi|218780678|ref|YP_002431996.1| CMP/dCMP deaminase zinc-binding [Desulfatibacillum alkenivorans AK-01] gi|218762062|gb|ACL04528.1| CMP/dCMP deaminase zinc-binding [Desulfatibacillum alkenivorans AK-01] Length = 156 Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/150 (40%), Positives = 89/150 (59%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 M+K + +M AL+EA+ A +E+PVGAV VL + +I +A NR L D AHAEILA+ Sbjct: 1 MEKHSKYMQMALDEAKTAWDEDEVPVGAVLVLPDQDLIIKAHNRTIGLNDAAAHAEILAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R R++ L LY T+EPC MC A+ AR+ ++ +GA + K G + F + Sbjct: 61 REAGRVIGNYRLLNSVLYCTVEPCIMCMGAVIHARVSKVVFGAPDLKWGACGSLYDFASD 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PEI G+ E+ R I+Q+FF+ +R Sbjct: 121 PGLNHHPEIVSGVCEEACRTIMQEFFRLKR 150 >gi|332879982|ref|ZP_08447666.1| cytidine and deoxycytidylate deaminase zinc-binding region [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681978|gb|EGJ54891.1| cytidine and deoxycytidylate deaminase zinc-binding region [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 145 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 86/149 (57%), Gaps = 6/149 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM ALEEA+ A +EIPVGA+ ++N+II+RA N L DVTAHAE+ AI Sbjct: 1 MTEDEYFMQKALEEAEVAFEEDEIPVGAIITIDNRIIARAHNMTERLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M L + L + +Y+TLEPC MCA A+ +++ RL Y A++ G G Sbjct: 61 MAANYLGGKYLKDCTMYLTLEPCAMCAGALYWSQLSRLVYAAADTHRGYTVMG------G 114 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 T H EI G+ + ++++ FF+++R Sbjct: 115 TLHPKTEITTGVLAAPATELLKQFFQQKR 143 >gi|32477503|ref|NP_870497.1| cytosine deaminase [Rhodopirellula baltica SH 1] gi|32448057|emb|CAD77574.1| cytosine deaminase [Rhodopirellula baltica SH 1] gi|327542170|gb|EGF28663.1| CMP/dCMP deaminase zinc-binding protein [Rhodopirellula baltica WH47] Length = 159 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 86/143 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+E AQ+AAL +E+PVGA+ V + I+ A N+ L D TAHAE++AI + Sbjct: 12 WMQRAIEMAQSAALEDEVPVGAIIVRSGTAIAAAANQREALHDPTAHAEMIAITQAAASI 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI AR+ R+ +GAS+PK G + + + T + +H Sbjct: 72 ENWRLEQTTLYVTLEPCLMCAGAILQARVPRVVFGASDPKAGAVTSLYEVLTDSRLNHRC 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ ++ ++ +FF +R Sbjct: 132 EITHGVMAEQCGHLLTEFFSAKR 154 >gi|95928326|ref|ZP_01311074.1| CMP/dCMP deaminase, zinc-binding [Desulfuromonas acetoxidans DSM 684] gi|95135597|gb|EAT17248.1| CMP/dCMP deaminase, zinc-binding [Desulfuromonas acetoxidans DSM 684] Length = 165 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+ A+ A E+PVGAV VLN K+I+ AGNR +D TAHAE++A+R + + Sbjct: 9 YMRRALDLARQAEQLGEVPVGAVVVLNGKVIAAAGNRRETWQDPTAHAELIALREAAKRI 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LYVTLEPC MC I L+RI RL +GA +P+ G + + +H Sbjct: 69 DSWRLEEATLYVTLEPCIMCMGGIILSRIPRLVFGARDPRVGAVGSVFDLADDERFNHRV 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + +I+ +FF++ R Sbjct: 129 EVSEGVLAEECSEILSNFFRQLR 151 >gi|302872965|ref|YP_003841598.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B] gi|307686520|ref|ZP_07628966.1| CMP/dCMP deaminase zinc-binding protein [Clostridium cellulovorans 743B] gi|302575822|gb|ADL49834.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B] Length = 147 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 62/149 (41%), Positives = 86/149 (57%), Gaps = 7/149 (4%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 N F+ A+EEA+ A E+PVGAV + ++K+I+ A N K+VTAHAE+LAI+M Sbjct: 2 NNNFLKIAIEEAKKARELGEVPVGAVIIKDDKVIAAAHNLKETKKEVTAHAELLAIKMAS 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFYTLA 120 IL L + ++YVTLEPC MCA+AI +RI+++Y G P G + N Q L Sbjct: 62 EILDNWRLNDCEIYVTLEPCAMCASAIVQSRIKKIYIGTFEPTTGACGSVINLVQNEALN 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + H +Y II +FFKERR Sbjct: 122 SFVHVEWLYS----DECSDIITEFFKERR 146 >gi|223043054|ref|ZP_03613102.1| tRNA-specific adenosine deaminase [Staphylococcus capitis SK14] gi|222443908|gb|EEE50005.1| tRNA-specific adenosine deaminase [Staphylococcus capitis SK14] Length = 168 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ +M A++EAQ A E+P+GAV V NN++I+ A N L+ TAHAE +AI Sbjct: 1 MRTDKDYMRLAIKEAQKAQALGEVPIGAVIVKNNQVIAHAHNLRESLQLPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +++ L E LYVTLEPC MCA AI ++RI R+ YGA +PKGG + Sbjct: 61 RASKVVGSWRLEECTLYVTLEPCVMCAGAIVMSRIPRVVYGAVDPKGGCTGSLMNLLEQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E +++DFFK R Sbjct: 121 QFNHRAIVESGILENECSTLLRDFFKNIR 149 >gi|34540529|ref|NP_905008.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas gingivalis W83] gi|188994633|ref|YP_001928885.1| putative cytosine/adenosine deaminase [Porphyromonas gingivalis ATCC 33277] gi|34396842|gb|AAQ65907.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas gingivalis W83] gi|188594313|dbj|BAG33288.1| putative cytosine/adenosine deaminase [Porphyromonas gingivalis ATCC 33277] Length = 150 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALEEA+ AA EIP+GAV V +I++RA NR L D TAHAE+LAI M + Sbjct: 13 YMRIALEEARAAADEGEIPIGAVIVCKGQIVARAHNRVERLNDPTAHAEMLAITMAVDAI 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVT+EPC MCA A+ +I R+ YGAS PK G + +T H Sbjct: 73 GGKYLRDCTLYVTVEPCLMCAGALRWTQIPRVVYGASEPK-----VGYRLFTDHALHPKC 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI S +++ FF ERR Sbjct: 128 HVEGGILADESENLMRSFFAERR 150 >gi|331270688|ref|YP_004397180.1| CMP/dCMP deaminase, zinc-binding protein [Clostridium botulinum BKT015925] gi|329127238|gb|AEB77183.1| CMP/dCMP deaminase, zinc-binding protein [Clostridium botulinum BKT015925] Length = 147 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 64/146 (43%), Positives = 85/146 (58%), Gaps = 7/146 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ A + E+PVGAV V N K+I+ A N LKD TAHAEILAI+ C IL Sbjct: 5 FMKLALKEAEIAKNKEEVPVGAVIVKNGKVIASAHNLRETLKDPTAHAEILAIKKACGIL 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG---GGIENGTQFYTLATCH 123 L E ++YVTLEPC MC AI +RI+++Y G +P G + + Q L T Sbjct: 65 GNWRLSECEMYVTLEPCPMCTGAIIQSRIKKIYIGTFDPVAGCCGSVVDLAQNRYLNTMV 124 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 IY ++ +I+ +FFK RR Sbjct: 125 DVTWIY----DKECSEILTNFFKNRR 146 >gi|313204491|ref|YP_004043148.1| cmp/dcmp deaminase zinc-binding protein [Paludibacter propionicigenes WB4] gi|312443807|gb|ADQ80163.1| CMP/dCMP deaminase zinc-binding protein [Paludibacter propionicigenes WB4] Length = 158 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 82/143 (57%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EAQ A R+E+P+GAV V +II+R N L DVTAHAE+ AI + L Sbjct: 20 FMRQALMEAQRAGERDEVPIGAVIVCQGRIIARGHNLTETLTDVTAHAEMQAITAAAQFL 79 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVT+EPC MCA A+ ++I R+ YGAS+ K G + + H Sbjct: 80 GGKYLIDCSLYVTVEPCVMCAGALGWSQISRVVYGASDEKRGFVR-----FAPNALHPKT 134 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI E ++++ FFK +R Sbjct: 135 EIVSGILEADCSKLVKKFFKRKR 157 >gi|298571687|gb|ADI87839.1| hypothetical protein AKSOIL_0331 [uncultured bacterium Ak20-3] Length = 156 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/148 (40%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM LE A A E+P+GAV V + KIIS + N+ + D T HAEILAI Sbjct: 6 KNHEYFMKRCLELAHEAEKNLEVPIGAVIVHDGKIISESSNKREKNHDATGHAEILAIHD 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C+ L L DLYVTLEPC MCA A+ ARIR +Y+GA +PKGG + + + + Sbjct: 66 ACQKLQSWRLSACDLYVTLEPCLMCAGALVQARIRNVYFGAYDPKGGALGSLYKIHEDTR 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ ++ FFK++R Sbjct: 126 LNHRFPAVGGVLGDECGSLLSTFFKKKR 153 >gi|229083334|ref|ZP_04215694.1| hypothetical protein bcere0022_180 [Bacillus cereus Rock3-44] gi|228699981|gb|EEL52606.1| hypothetical protein bcere0022_180 [Bacillus cereus Rock3-44] Length = 165 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 58/145 (40%), Positives = 83/145 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ FM A+EEA+ A E+P+GAV VL+ +++S A N + AHAE+LAI Sbjct: 1 MEQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVVSVAHNLRETEQRSIAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 EACKKLGTWRLENATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +H E+ G+ E+ ++ +FF Sbjct: 121 RFNHQCEVVSGVMEEECGTLLTNFF 145 >gi|194289718|ref|YP_002005625.1| tRNA-specific adenosine deaminase [Cupriavidus taiwanensis LMG 19424] gi|193223553|emb|CAQ69558.1| tRNA-specific adenosine deaminase [Cupriavidus taiwanensis LMG 19424] Length = 194 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 57/139 (41%), Positives = 82/139 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALEEA+ A E+PVGAV V N+ II+R N D +AHAE+ A+R +++ Sbjct: 29 YMRAALEEARLAEAAGEVPVGAVVVWNDTIIARGHNLPIRSVDPSAHAEMQALRAAAQVI 88 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 +PE +LYVTLEPC MC+ AI AR+R + +GAS+PK G + + A +H Sbjct: 89 GNYRMPECELYVTLEPCAMCSGAILHARLRHVVFGASDPKTGAAGSVVNLFEQAQLNHQT 148 Query: 127 EIYPGISEQRSRQIIQDFF 145 I G+ Q+++DFF Sbjct: 149 TIAGGVLADPCGQMLKDFF 167 >gi|282880121|ref|ZP_06288841.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella timonensis CRIS 5C-B1] gi|281305994|gb|EFA98034.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella timonensis CRIS 5C-B1] Length = 151 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 64/149 (42%), Positives = 84/149 (56%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +K+ FM AL EAQ A EIP+GAV V +IISRA N L DVTAHAE+LAI Sbjct: 7 LKRDEYFMRKALIEAQAAFDEGEIPIGAVVVCKGQIISRAHNLTERLHDVTAHAEMLAIT 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L + LYVT+EPC MCA+A A++ R+ +GAS+ K G + Y Sbjct: 67 AATNQLGGKYLTDCTLYVTIEPCPMCASACGWAQLSRVVFGASDDK-----RGFKRYAPK 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H EI G+ + ++Q FFK+RR Sbjct: 122 VLHPKAEITNGVLREDCMALMQLFFKKRR 150 >gi|311745177|ref|ZP_07718962.1| cytidine/deoxycytidylate deaminase family protein [Algoriphagus sp. PR1] gi|311302345|gb|EAZ81919.2| cytidine/deoxycytidylate deaminase family protein [Algoriphagus sp. PR1] Length = 147 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 88/143 (61%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ AL++A+ A EIPVGAV VL N+II+RA N+ +L DVTAHAE+LAI + Sbjct: 9 YMNEALKQAKIAFEEGEIPVGAVIVLKNRIIARAYNQTEKLNDVTAHAEMLAITSAANYM 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPCTMCA A+ ++I ++Y A + K G ++ + H Sbjct: 69 GAKYLNDCKLYVTLEPCTMCAGALFWSQIGEVHYAAQDEKRGYRKSNPEI-----LHPKT 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +++ G + S Q+I DFFK+ R Sbjct: 124 KVFQGPFREESEQLILDFFKKLR 146 >gi|228989231|ref|ZP_04149225.1| hypothetical protein bpmyx0001_110 [Bacillus pseudomycoides DSM 12442] gi|228995414|ref|ZP_04155085.1| hypothetical protein bmyco0003_200 [Bacillus mycoides Rock3-17] gi|229003028|ref|ZP_04160886.1| hypothetical protein bmyco0002_210 [Bacillus mycoides Rock1-4] gi|228758228|gb|EEM07415.1| hypothetical protein bmyco0002_210 [Bacillus mycoides Rock1-4] gi|228764340|gb|EEM13216.1| hypothetical protein bmyco0003_200 [Bacillus mycoides Rock3-17] gi|228770506|gb|EEM19076.1| hypothetical protein bpmyx0001_110 [Bacillus pseudomycoides DSM 12442] Length = 165 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 59/145 (40%), Positives = 82/145 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ FM A+EEA+ A E+P+GAV VL ++IS A N + AHAE+LAI Sbjct: 1 MEQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLGGEVISVAHNLRETEQRSIAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 EACKKLGTWRLENATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +H E+ G+ E+ ++ +FF Sbjct: 121 RFNHQCEVVSGVMEEECGMLLTNFF 145 >gi|197285737|ref|YP_002151609.1| tRNA-specific adenosine deaminase [Proteus mirabilis HI4320] gi|194683224|emb|CAR43904.1| tRNA-specific adenosine deaminase [Proteus mirabilis HI4320] Length = 176 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+E+A A EIPVGAV V NKII++ N + D TAHAEI+A+R G + L Sbjct: 10 WMHKAIEQAHKAQQLGEIPVGAVLVAENKIIAKGWNHSIIDNDPTAHAEIMALRKGGKHL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LY+TLEPC MCA AI +R++R+ YGAS+ K G + +H Sbjct: 70 QNYRLLDATLYITLEPCVMCAGAIVHSRVKRVVYGASDLKTGAAGSFIDILQHPGMNHKV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q++ FFK RR Sbjct: 130 EITSGVLGEECAQLLSQFFKMRR 152 >gi|89898061|ref|YP_515171.1| cytosine/adenosine deaminases [Chlamydophila felis Fe/C-56] gi|89331433|dbj|BAE81026.1| cytosine/adenosine deaminases [Chlamydophila felis Fe/C-56] Length = 157 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 61/149 (40%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM AL EA+ A +E+PVG V V +NKII+R N +L+D TAHAEIL I Sbjct: 3 IEKDIFFMKQALREARQAYDEDEVPVGCVIVKDNKIIARGHNTIEKLQDPTAHAEILCIG 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + LY TLEPC MCA AI AR+RR+ + A + + G + +T Sbjct: 63 AAAQYLENWRLVDTVLYCTLEPCLMCAGAIQQARVRRIVWAAPDLRLGAGGSWINVFTEK 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E + GI + S Q+++ FF E+R Sbjct: 123 HPFHRVECFSGICREESEQLMKQFFIEKR 151 >gi|325286553|ref|YP_004262343.1| CMP/dCMP deaminase zinc-binding protein [Cellulophaga lytica DSM 7489] gi|324322007|gb|ADY29472.1| CMP/dCMP deaminase zinc-binding protein [Cellulophaga lytica DSM 7489] Length = 149 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 84/143 (58%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEAQ A + E+PVGAV V+ ++II+RA N +L DVTAHAE+ AI L Sbjct: 10 FMKKALEEAQAAYDKGEVPVGAVIVIKDRIIARAHNLTEQLNDVTAHAEMQAITSAANFL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVTLEPC MCA A+ ++I ++ Y A + K G T T H Sbjct: 70 GGKYLENCTLYVTLEPCQMCAGALYWSQISKIVYAAKDVKRGFTAMST------TLHPKT 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ E+ + ++++ FF E+R Sbjct: 124 KISGGLLEKEASELLKRFFIEKR 146 >gi|299141289|ref|ZP_07034426.1| cytidine/deoxycytidylate deaminase family protein [Prevotella oris C735] gi|298577249|gb|EFI49118.1| cytidine/deoxycytidylate deaminase family protein [Prevotella oris C735] Length = 148 Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 66/147 (44%), Positives = 87/147 (59%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K +M AL EA+ AA EIP+GAV V ++IISRA N +L DVTAHAE+ AI Sbjct: 7 KDEQYMRKALYEAERAAEEGEIPIGAVIVCKDRIISRAHNLTEKLHDVTAHAEMQAITSA 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L + L + LYVT+EPC MCA AI A+I R+ YGAS+ K G Q Y Sbjct: 67 ADLLGGKYLSDCTLYVTVEPCVMCAGAIGWAQIGRIVYGASDEK-----RGYQLYAPRAF 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E RQ++Q+FFK++R Sbjct: 122 HPKATVTRGVLEAECRQLMQEFFKQKR 148 >gi|313891940|ref|ZP_07825541.1| cytidine and deoxycytidylate deaminase zinc-binding region [Dialister microaerophilus UPII 345-E] gi|313119583|gb|EFR42774.1| cytidine and deoxycytidylate deaminase zinc-binding region [Dialister microaerophilus UPII 345-E] Length = 149 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 88/143 (61%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ A++EA+ A + NE+P+GA+ + II+ + N + K++ HAEILAI+ ++L Sbjct: 6 YMTLAIQEAKKAYMNNEMPIGAIITYKDIIIANSYNECEKNKNIFDHAEILAIKKASKLL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVT+EPC MCA AI +RI RL +GA N GGI + + ++ +H+ Sbjct: 66 NTSRLTGCTLYVTIEPCPMCAGAIMHSRIDRLVFGAFNNLYGGIISKYKIGKDSSMNHTL 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI E +Q++ DFFK +R Sbjct: 126 SVVSGIEENTCKQLVCDFFKNKR 148 >gi|15672703|ref|NP_266877.1| hypothetical protein L127182 [Lactococcus lactis subsp. lactis Il1403] gi|281491217|ref|YP_003353197.1| tRNA-specific adenosine deaminase [Lactococcus lactis subsp. lactis KF147] gi|12723633|gb|AAK04819.1|AE006305_11 conserved hypothetical protein [Lactococcus lactis subsp. lactis Il1403] gi|281374958|gb|ADA64476.1| tRNA-specific adenosine deaminase [Lactococcus lactis subsp. lactis KF147] gi|326406265|gb|ADZ63336.1| tRNA-specific adenosine deaminase [Lactococcus lactis subsp. lactis CV56] Length = 155 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 63/140 (45%), Positives = 85/140 (60%), Gaps = 2/140 (1%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-VTAHAEILAIRMGCRILSQE 69 AL+EAQ AA E+P+G V V + +II+R NR REL T HAE+ AI + + Sbjct: 15 ALKEAQKAAENEEVPIGVVIVKDGEIIARDFNR-RELDGRATHHAEVCAIEAANQAVGNW 73 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 L + L+VT+EPC MCA AI LARI ++Y+GA+NPK GG + Q +H ++ Sbjct: 74 RLLDCALFVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQILEDKRLNHRVQVE 133 Query: 130 PGISEQRSRQIIQDFFKERR 149 GI E +I+QDFFK RR Sbjct: 134 SGILEDECAKIMQDFFKNRR 153 >gi|120437789|ref|YP_863475.1| cytidine/deoxycytidylate deaminase family protein [Gramella forsetii KT0803] gi|117579939|emb|CAL68408.1| cytidine/deoxycytidylate deaminase family protein [Gramella forsetii KT0803] Length = 149 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 83/143 (58%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA++A + EIPVG V V+N+KII+R N L DVTAHAE+ AI L Sbjct: 10 FMKKALEEAESAYEKGEIPVGVVVVINDKIIARGHNLTETLNDVTAHAEMQAITAAANFL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +Y+TLEPC MCA A+ ++I ++ +GA + + G + G Q H Sbjct: 70 GGKYLQNCTMYITLEPCQMCAGALYWSQISKIVFGAEDSQRGYRKFGVQL------HPKT 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI + + I++ FF E+R Sbjct: 124 EVKSGIMAEEASSILKRFFIEKR 146 >gi|52783876|ref|YP_089705.1| YaaJ [Bacillus licheniformis ATCC 14580] gi|52346378|gb|AAU39012.1| YaaJ [Bacillus licheniformis ATCC 14580] Length = 162 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ EA+ A + E+P+GAV VL+ +II+RA N + AHAE+L I Sbjct: 3 MTQDEFYMKEAVNEARKAEEKGEVPIGAVLVLDGEIIARAHNLRETEQRSVAHAEMLVIE 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR L L LYVTLEPC MCA A L+RI ++ +GAS+PKGG Sbjct: 63 EACRKLGTWRLERAVLYVTLEPCPMCAGAAVLSRIDKVVFGASDPKGGCAGTLMNLLQEE 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ +++ DFF++ R Sbjct: 123 RFNHQAEVVSGVMEEECGRMLSDFFRKLR 151 >gi|152981408|ref|YP_001353698.1| hypothetical protein mma_2008 [Janthinobacterium sp. Marseille] gi|151281485|gb|ABR89895.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 159 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 83/144 (57%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FM AL++A+NA E+PVGAV V + ++I+ N+ D TAHAEI+A+R I Sbjct: 5 IFMRQALDQARNAWTLGEVPVGAVVVKDGEVIATGFNQPIGTHDPTAHAEIMALRAAASI 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L LP +L+VTLEPC MC+ A+ AR+ R+ +GA +PK G + + +H Sbjct: 65 LGNYRLPGCELFVTLEPCVMCSGAMMHARLARVVFGAPDPKTGACGSVVNLFEQNQLNHH 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G+ +++DFF ERR Sbjct: 125 TQFIGGVLADECSALLKDFFAERR 148 >gi|332971231|gb|EGK10194.1| zinc-binding domain protein [Desmospora sp. 8437] Length = 152 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 84/145 (57%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + +M A+ EA+ A + E+P+GAV V +II R N +D TAHAE++AIR R Sbjct: 4 DQWMMEAIREAEQAEAKGEVPIGAVLVREGEIIGRGHNLRESHQDPTAHAEMIAIREAAR 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 +L L +LYVTLEPC MCA AI L+R+ L YGA +PKGG +H Sbjct: 64 LLGGWRLAGCELYVTLEPCPMCAGAILLSRLDTLIYGAYDPKGGCAGTLMNLPRDDRFNH 123 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ GI EQ ++++DFF++ R Sbjct: 124 QVEVVGGILEQECGELLRDFFRKLR 148 >gi|281423636|ref|ZP_06254549.1| tRNA-specific adenosine deaminase [Prevotella oris F0302] gi|281402188|gb|EFB33019.1| tRNA-specific adenosine deaminase [Prevotella oris F0302] Length = 154 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 66/147 (44%), Positives = 87/147 (59%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K +M AL EA+ AA EIP+GAV V ++IISRA N +L DVTAHAE+ AI Sbjct: 13 KDEQYMRKALYEAERAAEEGEIPIGAVIVCKDRIISRAHNLTEKLHDVTAHAEMQAITSA 72 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L + L + LYVT+EPC MCA AI A+I R+ YGAS+ K G Q Y Sbjct: 73 ADLLGGKYLSDCTLYVTVEPCVMCAGAIGWAQIGRIVYGASDEK-----RGYQLYAPRAF 127 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E RQ++Q+FFK++R Sbjct: 128 HPKATVTRGVLEAECRQLMQEFFKQKR 154 >gi|319648541|ref|ZP_08002756.1| YaaJ protein [Bacillus sp. BT1B_CT2] gi|317389389|gb|EFV70201.1| YaaJ protein [Bacillus sp. BT1B_CT2] Length = 160 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ EA+ A + E+P+GAV VL+ +II+RA N + AHAE+L I Sbjct: 1 MTQDEFYMKEAVNEARKAEEKGEVPIGAVLVLDGEIIARAHNLRETEQRSVAHAEMLVIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR L L LYVTLEPC MCA A L+RI ++ +GAS+PKGG Sbjct: 61 EACRKLGTWRLERAVLYVTLEPCPMCAGAAVLSRIDKVVFGASDPKGGCAGTLMNLLQEE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ +++ DFF++ R Sbjct: 121 RFNHQAEVVSGVMEEECGRMLSDFFRKLR 149 >gi|70727433|ref|YP_254349.1| hypothetical protein SH2434 [Staphylococcus haemolyticus JCSC1435] gi|68448159|dbj|BAE05743.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 157 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 86/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+EEA+ A E+P+GA+ V NN++I+ A N + TAHAE +AI Sbjct: 1 MANDEYYMKLAIEEAKKAQKLGEVPIGAIIVKNNEVIASAHNLRETAQLPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L LYVTLEPC MCA AI ++RI ++ YGA++PKGG + + Sbjct: 61 RASKVLGSWRLEGCTLYVTLEPCVMCAGAIVMSRIPKVVYGATDPKGGCSGSLMNLLEES 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ EQ ++++FF+E R Sbjct: 121 QFNHRAEIVKGVLEQECGDLLRNFFRELR 149 >gi|296114354|ref|ZP_06833008.1| CMP/dCMP deaminase [Gluconacetobacter hansenii ATCC 23769] gi|295979115|gb|EFG85839.1| CMP/dCMP deaminase [Gluconacetobacter hansenii ATCC 23769] Length = 173 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 51/117 (43%), Positives = 76/117 (64%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 + I+S AGNR+ E D +AHAE+LA+R RI + L + LYVTLEPC MCA A Sbjct: 55 DGAILSCAGNRSEEWHDPSAHAEMLALREATRIRGGQRLSDCALYVTLEPCPMCAGAAVH 114 Query: 93 ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 RI R+ +GA +PKGGG+++G + + C H PE+ G+ E+ ++ +++ FF+ RR Sbjct: 115 FRIGRILFGAYDPKGGGVDHGPRLFARPGCLHRPEVIGGLREREAQDMLRAFFRNRR 171 >gi|152997998|ref|YP_001342833.1| zinc-binding CMP/dCMP deaminase [Marinomonas sp. MWYL1] gi|150838922|gb|ABR72898.1| CMP/dCMP deaminase zinc-binding [Marinomonas sp. MWYL1] Length = 162 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 60/129 (46%), Positives = 80/129 (62%), Gaps = 2/129 (1%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 NEIPVGA+ VL+ +II N L D TAHAEI AIRM C+ ++ LP LYVTLE Sbjct: 21 NEIPVGAIVVLDGEIIGEGYNAPISLCDPTAHAEIQAIRMACKTINNYRLPGATLYVTLE 80 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI-SEQRSRQI 140 PC+MCA A+ ARI R+ Y A+ PK G +E+ F+ +H ++ G+ +E S Q+ Sbjct: 81 PCSMCAGAMVHARIDRVVYAATEPKSGIVESQGHFFEAPFLNHKVKVESGVLAEMASLQL 140 Query: 141 IQDFFKERR 149 Q FF+ RR Sbjct: 141 TQ-FFQYRR 148 >gi|163119172|ref|YP_077304.2| putative cytidine/deoxycytidylate deaminase, zinc-binding region YaaJ [Bacillus licheniformis ATCC 14580] gi|145902675|gb|AAU21666.2| putative Cytidine/deoxycytidylate deaminase, zinc-binding region YaaJ [Bacillus licheniformis ATCC 14580] Length = 196 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ EA+ A + E+P+GAV VL+ +II+RA N + AHAE+L I Sbjct: 37 MTQDEFYMKEAVNEARKAEEKGEVPIGAVLVLDGEIIARAHNLRETEQRSVAHAEMLVIE 96 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR L L LYVTLEPC MCA A L+RI ++ +GAS+PKGG Sbjct: 97 EACRKLGTWRLERAVLYVTLEPCPMCAGAAVLSRIDKVVFGASDPKGGCAGTLMNLLQEE 156 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ +++ DFF++ R Sbjct: 157 RFNHQAEVVSGVMEEECGRMLSDFFRKLR 185 >gi|325688867|gb|EGD30875.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK115] Length = 156 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 61/149 (40%), Positives = 86/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEVFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 66 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+QDFF++RR Sbjct: 126 RLNHRVEVEVGVLQEECVQIMQDFFRQRR 154 >gi|294102217|ref|YP_003554075.1| CMP/dCMP deaminase zinc-binding protein [Aminobacterium colombiense DSM 12261] gi|293617197|gb|ADE57351.1| CMP/dCMP deaminase zinc-binding protein [Aminobacterium colombiense DSM 12261] Length = 156 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 87/143 (60%), Gaps = 2/143 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ AL+EA+ AA E+PV A+ V NN++I + G+ ++ L D TAHAEI+AIR L Sbjct: 10 FMNMALDEARKAAEHGEVPVAALVVRNNEVIGK-GSNSKHL-DPTAHAEIIAIREATERL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA AI L+RI+ L YGA++P+ G + +H Sbjct: 68 GTWNLRGSTLYVTLEPCPMCAGAIVLSRIKCLVYGAADPRAGACGTLYNIVQDSRLNHRC 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ Q S ++ D+FK+RR Sbjct: 128 EVIKGVLAQESANLLWDYFKKRR 150 >gi|289435993|ref|YP_003465865.1| cytidine/deoxycytidylate deaminase family protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172237|emb|CBH28783.1| cytidine/deoxycytidylate deaminase family protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 156 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C Sbjct: 6 FMQQALVEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACNHQ 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 66 KSWRLSGAELYVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E S ++++ FF+E R Sbjct: 126 EVESGLMEAESSEMLKSFFQELR 148 >gi|255534275|ref|YP_003094646.1| tRNA-specific adenosine-34 deaminase [Flavobacteriaceae bacterium 3519-10] gi|255340471|gb|ACU06584.1| tRNA-specific adenosine-34 deaminase [Flavobacteriaceae bacterium 3519-10] Length = 143 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 81/143 (56%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+EAQ A ++E+P+G + V NN+II++A N L DVTAHAE+ AI L Sbjct: 7 YMKIALQEAQQALEKDEVPIGCIIVSNNRIIAKAHNLTEALNDVTAHAEMQAITSAANYL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVTLEPC MC A+S ++I ++ GA + + G I H Sbjct: 67 GGKYLQNCTLYVTLEPCVMCCGALSWSQISKVVIGARDEQRGFINKNLSI------HPKT 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ E Q+++DFFK +R Sbjct: 121 EIVLGVLENECSQLVKDFFKSKR 143 >gi|313631569|gb|EFR98838.1| tRNA-specific adenosine deaminase [Listeria seeligeri FSL N1-067] Length = 156 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C Sbjct: 6 FMQQALVEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACNHQ 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 66 KSWRLSGAELYVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E S ++++ FF+E R Sbjct: 126 EVESGLMEAESSEMLKSFFQELR 148 >gi|167766023|ref|ZP_02438076.1| hypothetical protein CLOSS21_00515 [Clostridium sp. SS2/1] gi|167712103|gb|EDS22682.1| hypothetical protein CLOSS21_00515 [Clostridium sp. SS2/1] Length = 161 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 89/149 (59%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+++A+ AA+ ++P+G V V ++KII+RA N+ + K AHAE+LAI+ Sbjct: 1 MTQEEKYMKEAIKQAKKAAVIGDVPIGCVIVEDDKIIARAYNQRNKKKTTLAHAELLAIQ 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + ++ L + +Y+TLEPC MCA AI ARI ++ GA NPK G + + Sbjct: 61 KASKKVNDWRLEDCTMYITLEPCQMCAGAIVQARIPKVVIGAMNPKAGCAGSVLNILQID 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI E+ Q++ DFFKE R Sbjct: 121 KFNHQVEIERGILEEECSQMLSDFFKELR 149 >gi|329113789|ref|ZP_08242560.1| Putative deaminase [Acetobacter pomorum DM001] gi|326696799|gb|EGE48469.1| Putative deaminase [Acetobacter pomorum DM001] Length = 151 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 89/143 (62%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL +A AA E+PVGAV + + ++++AGNR EL D +AHAE+L +R + Sbjct: 7 MELALWQAHLAAANGEVPVGAVLLDSAGNVLAQAGNRVEELHDPSAHAEMLVMREAVQQR 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L+V+LEPC MCAAA++ R+ R+ +GA +PKGGG+E+G + H Sbjct: 67 QGQKLADCTLFVSLEPCPMCAAAMAHFRLGRVVFGAYDPKGGGVEHGARLPHRPETLHRM 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ EQ S ++++ FF+ R Sbjct: 127 EVIGGVREQESAEMLKTFFQTLR 149 >gi|228478058|ref|ZP_04062669.1| tRNA-specific adenosine deaminase [Streptococcus salivarius SK126] gi|228250238|gb|EEK09491.1| tRNA-specific adenosine deaminase [Streptococcus salivarius SK126] Length = 172 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 85/145 (58%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FMS AL+EA+ + + EIP+G V V + +++ R N EL HAE++AI+ R Sbjct: 10 DFFMSEALKEAEKSLDKAEIPIGCVIVKDGEVVGRGHNAREELNQAIMHAEVMAIQEANR 69 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L + L+VT+EPC MC+ AI LARI ++ YGASN K GG + +H Sbjct: 70 TVGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGASNQKFGGAGSLYDILRDERLNH 129 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ +I+QDFF++ R Sbjct: 130 RVEVETGVMEEECAKIMQDFFRQSR 154 >gi|326390318|ref|ZP_08211877.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter ethanolicus JW 200] gi|325993595|gb|EGD52028.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter ethanolicus JW 200] Length = 148 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 81/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM A+ EA+ + E+PVGAV V + +II + N+ D T HAEILAI+ C+ Sbjct: 3 NRFMEAAILEAKKSYQLGEVPVGAVIVKDGQIIGKGFNQKESSNDATTHAEILAIKEACK 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + +YVTLEPC MCA AI +RI+R+Y GA + + G + Sbjct: 63 TLGSWRLDDCSMYVTLEPCPMCAGAILESRIKRVYIGAESERTGAAGTVVDILNNSYLGS 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+Y GI E+ + +++DFF+ R Sbjct: 123 KTEVYFGIMEEECKTLLKDFFENLR 147 >gi|1296969|emb|CAA65178.1| orf150 [Porphyromonas gingivalis] Length = 150 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALEEA+ AA EIP+GAV V +I++RA NR L D TAHAE+LAI M + Sbjct: 13 YMRIALEEARAAADEGEIPIGAVIVCKGQIVARAHNRVERLNDPTAHAEMLAITMAVDAI 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVT+EPC MCA A+ +I R+ YGAS PK G + +T H Sbjct: 73 GGKYLRDCTLYVTVEPCLMCAGALRWTQIPRVVYGASEPK-----VGYRLFTDHALHPKC 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI S +++ FF ERR Sbjct: 128 LVEGGILADESENLMRSFFAERR 150 >gi|332707760|ref|ZP_08427787.1| tRNA-adenosine deaminase [Lyngbya majuscula 3L] gi|332353463|gb|EGJ32976.1| tRNA-adenosine deaminase [Lyngbya majuscula 3L] Length = 163 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 65/144 (45%), Positives = 80/144 (55%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M+ A+E AQ A E+PVGAV V N K+I+ NR KD TAHAEILA+R + Sbjct: 17 WMTVAIEIAQKAGEAGEVPVGAVIVDNEGKLIATGENRRERDKDPTAHAEILALRAAGQQ 76 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LYVTLEPC MCA AI LAR+ L YG +PK G I A +H Sbjct: 77 LQSWHLNHCTLYVTLEPCPMCAGAIILARLGLLVYGVDDPKTGSIRTVANLPDSACSNHR 136 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI E R+ +Q +F ERR Sbjct: 137 LPVLGGIMESVCREQLQSWFAERR 160 >gi|15606234|ref|NP_213612.1| hypothetical protein aq_903 [Aquifex aeolicus VF5] gi|6226405|sp|O67050|TADA_AQUAE RecName: Full=tRNA-specific adenosine deaminase gi|2983443|gb|AAC07025.1| hypothetical protein aq_903 [Aquifex aeolicus VF5] Length = 151 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 89/145 (61%), Gaps = 5/145 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ AL EA+ A + E+PVGA+ V +IIS+A N ELKD TAHAE+LAI+ CR L Sbjct: 6 FLKVALREAKRAFEKGEVPVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACRRL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH-- 124 + + L +LYVTLEPC MC+ A+ L+RI ++ + A + K GG+ + T +H Sbjct: 66 NTKYLEGCELYVTLEPCIMCSYALVLSRIEKVIFSALDKKHGGVVSVFNILDEPTLNHRV 125 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E YP + + +++ +FFK+ R Sbjct: 126 KWEYYPL---EEASELLSEFFKKLR 147 >gi|317499420|ref|ZP_07957687.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lachnospiraceae bacterium 5_1_63FAA] gi|316893292|gb|EFV15507.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lachnospiraceae bacterium 5_1_63FAA] Length = 161 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 89/149 (59%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+++A+ AA+ ++P+G V V ++KII+RA N+ + K AHAE+LAI+ Sbjct: 1 MTQEEKYMKEAIKQAKKAAVIGDVPIGCVIVEDDKIIARAYNQRNKKKTTLAHAELLAIQ 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + ++ L + +Y+TLEPC MCA AI ARI ++ GA NPK G + + Sbjct: 61 KASKKVNDWRLEDCTMYITLEPCQMCAGAIVQARIPKVVIGAMNPKAGCAGSVLNILQID 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI E+ Q++ DFFKE R Sbjct: 121 KFNHQVEIERGILEEECSQMLSDFFKELR 149 >gi|169830233|ref|YP_001716215.1| CMP/dCMP deaminase [Candidatus Desulforudis audaxviator MP104C] gi|169637077|gb|ACA58583.1| CMP/dCMP deaminase, zinc-binding [Candidatus Desulforudis audaxviator MP104C] Length = 156 Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA+ A + E+PVGAV V + II R N D +AHAE+LA+R ++ Sbjct: 13 YMREALREAEKAYAKGEVPVGAVVVQDGTIIGRGHNLREADNDASAHAELLAMRQAAQVS 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +YVT+EPC MCA A+ R+RR+ YG ++PK G + + +H Sbjct: 73 GDWRLSGATVYVTMEPCPMCAGALVQFRVRRVVYGTADPKAGAAGSVVELLREPRFNHQV 132 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ PG+ E R+I+Q FF+ R Sbjct: 133 EVIPGVLEAECREIVQRFFRALR 155 >gi|319399688|gb|EFV87937.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Staphylococcus epidermidis FRI909] Length = 168 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 86/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKK + +M A++EA A E+P+GAV V +++I+RA N L+ TAHAE +AI Sbjct: 1 MKKNHDYMRLAIKEAHKAKALGEVPIGAVIVKEDQVIARAHNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L E LYVTLEPC MCA I ++RI ++ YGA++PKGG + Sbjct: 61 RASEVVGSWRLEECTLYVTLEPCVMCAGTIIMSRIPKVVYGATDPKGGCSGSLMNLLEQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E+ ++++ FFKE R Sbjct: 121 QFNHRAIVEKGILEEECAELLRSFFKEIR 149 >gi|282858963|ref|ZP_06268101.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella bivia JCVIHMP010] gi|282588243|gb|EFB93410.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella bivia JCVIHMP010] Length = 150 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 85/149 (57%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +KK +M AL+EA+ A EIP+GA+ V NKII+RA N L DVTAHAE+ AI Sbjct: 7 VKKDIYYMQRALDEAKQAYKEGEIPIGAIVVCKNKIIARAHNLTETLHDVTAHAEMQAIT 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + L + LYVT+EPC MCA A+ ++I+R+ +G + K G E Y Sbjct: 67 IAANELGGKYLEDCTLYVTVEPCIMCAGALGWSQIKRVVFGCLDEKRGYHE-----YAPK 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ + + ++Q FFKERR Sbjct: 122 ALHPKANVIGGVLDSECKALMQRFFKERR 150 >gi|319940016|ref|ZP_08014370.1| tRNA-specific adenosine deaminase [Streptococcus anginosus 1_2_62CV] gi|319810730|gb|EFW07057.1| tRNA-specific adenosine deaminase [Streptococcus anginosus 1_2_62CV] Length = 155 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 86/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A + +EIP+G V V N +II R N EL+ HAE++AI Sbjct: 5 VEEKEFFMREALKEAEIALVNDEIPIGCVIVKNGEIIGRGHNAREELQRAVMHAEVMAIE 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + L+VT+EPC MC+ AI LARI ++ YGA NPK G + T Sbjct: 65 KANQHEHSWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIYGAKNPKFGAAGSLYDILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E Q++QDFF++RR Sbjct: 125 RLNHRVELETGILEVECAQMMQDFFRKRR 153 >gi|325298404|ref|YP_004258321.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides salanitronis DSM 18170] gi|324317957|gb|ADY35848.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides salanitronis DSM 18170] Length = 144 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 82/149 (55%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL EA+ A+ R E+PVGAV V +II+RA N L DVTAHAE+ AI Sbjct: 1 MADDTFYMKQALAEAEKASARGEVPVGAVVVCQGRIIARAHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L + LYVT+EPC MCA AI+ A++ +L +GA + K G Y A Sbjct: 61 AAANALGAKYLNDCTLYVTVEPCVMCAGAIAWAQLGKLVFGAGDEK-----RGYMRYAPA 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ + ++ FF++RR Sbjct: 116 ALHPKTEVVSGVLKDECAGLMTAFFRKRR 144 >gi|60593936|pdb|1WWR|A Chain A, Crystal Structure Of Trna Adenosine Deaminase Tada From Aquifex Aeolicus gi|60593937|pdb|1WWR|B Chain B, Crystal Structure Of Trna Adenosine Deaminase Tada From Aquifex Aeolicus gi|60593938|pdb|1WWR|C Chain C, Crystal Structure Of Trna Adenosine Deaminase Tada From Aquifex Aeolicus gi|60593939|pdb|1WWR|D Chain D, Crystal Structure Of Trna Adenosine Deaminase Tada From Aquifex Aeolicus Length = 171 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 89/145 (61%), Gaps = 5/145 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ AL EA+ A + E+PVGA+ V +IIS+A N ELKD TAHAE+LAI+ CR L Sbjct: 26 FLKVALREAKRAFEKGEVPVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACRRL 85 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH-- 124 + + L +LYVTLEPC MC+ A+ L+RI ++ + A + K GG+ + T +H Sbjct: 86 NTKYLEGCELYVTLEPCIMCSYALVLSRIEKVIFSALDKKHGGVVSVFNILDEPTLNHRV 145 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E YP + + +++ +FFK+ R Sbjct: 146 KWEYYPL---EEASELLSEFFKKLR 167 >gi|314932786|ref|ZP_07840155.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus caprae C87] gi|313654467|gb|EFS18220.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus caprae C87] Length = 168 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ +M A++EAQ A E+P+GAV V N+++I+ A N L+ TAHAE +AI Sbjct: 1 MRTDKDYMRLAIKEAQKAQALGEVPIGAVIVKNDQVIAHAHNLRESLQLPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +++ L E LYVTLEPC MCA AI ++RI R+ YGA +PKGG + Sbjct: 61 RASKVVGSWRLEECTLYVTLEPCVMCAGAIVMSRIPRVVYGAVDPKGGCTGSLMNLLEKP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E +++DFFK R Sbjct: 121 QFNHRAIVESGILENECSTLLRDFFKNIR 149 >gi|62185341|ref|YP_220126.1| putative cytidine/deoxycytidylate deaminase family protein [Chlamydophila abortus S26/3] gi|62148408|emb|CAH64175.1| putative cytidine/deoxycytidylate deaminase family protein [Chlamydophila abortus S26/3] Length = 157 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 61/149 (40%), Positives = 86/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM+ AL+EA+ A +E+PVG V V +NKII+R N +L+D TAHAEIL I Sbjct: 3 IEKDIFFMNQALKEARQAYDEDEVPVGCVIVKDNKIIARGHNTTEKLQDPTAHAEILCIG 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + LY TLEPC MCA AI LARIRR+ + A + + G + + Sbjct: 63 AAAQYLENWRLVDTVLYCTLEPCLMCAGAIQLARIRRIVWAAPDLRLGAGGSWLNVFKEK 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E + GI + Q+++ FF E+R Sbjct: 123 HPFHQVECFFGICCADAEQLMKQFFIEKR 151 >gi|83591989|ref|YP_425741.1| tRNA-adenosine deaminase [Rhodospirillum rubrum ATCC 11170] gi|83574903|gb|ABC21454.1| tRNA-adenosine deaminase [Rhodospirillum rubrum ATCC 11170] Length = 159 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 53/129 (41%), Positives = 77/129 (59%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV + ++ NR D TAHAEILAIR C LP+ L+VTL Sbjct: 31 GEVPVGAVITDAGGRPLAACANRTETDHDPTAHAEILAIRAACARRGDARLPDCTLWVTL 90 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA+AI AR+ R+ +GA +PKGG +++G + + C H PE+ G++E + + Sbjct: 91 EPCPMCASAIVHARLARVIFGAYDPKGGAVDHGVRLFAHPGCLHRPEVIGGMAESAAATL 150 Query: 141 IQDFFKERR 149 ++ FF+ R Sbjct: 151 LRGFFQALR 159 >gi|227510688|ref|ZP_03940737.1| possible guanine deaminase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189809|gb|EEI69876.1| possible guanine deaminase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 157 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 82/143 (57%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K FM AL EAQ A L E+P+GAV + +II R N L D AHAEI+AI Sbjct: 5 KDEKFMKMALIEAQKAYLIGEVPIGAVITQDGQIIGRGHNLREHLNDGVAHAEIMAIEEA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 CR L L + +LYVT+EPC MC+ AI +RI R+ +GA + K G + + + + Sbjct: 65 CRYLRSWRLVDCELYVTIEPCLMCSGAIVNSRIDRVVFGARDKKAGAVRSLYKVLEDSRL 124 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 +H+ E+ G+ + +I++DFF Sbjct: 125 NHNVEVLEGVLQPACSKIMKDFF 147 >gi|221067789|ref|ZP_03543894.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] gi|220712812|gb|EED68180.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] Length = 463 Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 57/143 (39%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+A+ AA E+PVGAV V + ++I R N +D TAHAE+LA+R R L Sbjct: 11 FMRQALEQARCAAACGEVPVGAVVVKDGQVIGRGHNSPLSAQDPTAHAEVLALREAARTL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMC+ A+ AR+ + YGA+ P+ G + + +T +H Sbjct: 71 GNYRLEGCTLYVTLEPCTMCSGAMLHARVDAVVYGAAEPRTGAAGSVLDVFGYSTINHQT 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + +I +FF+ RR Sbjct: 131 RVLRGVLAAQCSALIAEFFQLRR 153 >gi|295425582|ref|ZP_06818269.1| cytidine/deoxycytidylate deaminase [Lactobacillus amylolyticus DSM 11664] gi|295064598|gb|EFG55519.1| cytidine/deoxycytidylate deaminase [Lactobacillus amylolyticus DSM 11664] Length = 166 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 87/144 (60%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+ EA+ A ++E+P+GA+ V + +++ + NR +D T HAE++AIR C+ Sbjct: 10 YMQLAIIEAKKAERQDEVPIGAIVVAPDGQVVGKGYNRRELDQDATQHAEMIAIREACKN 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L + L+VTLEPC MCA AI ARI+ +Y+GA +PK G + +T+ +H Sbjct: 70 IGFWRLIDCSLFVTLEPCPMCAGAIINARIKDVYFGAMDPKAGAAGSVVDLFTVEKFNHH 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P++ G+ + Q++ DFF+ R Sbjct: 130 PQVIRGLYQDECSQMLTDFFRAIR 153 >gi|254882842|ref|ZP_05255552.1| cytosine deaminase [Bacteroides sp. 4_3_47FAA] gi|319643397|ref|ZP_07998023.1| cytosine/adenosine deaminase [Bacteroides sp. 3_1_40A] gi|254835635|gb|EET15944.1| cytosine deaminase [Bacteroides sp. 4_3_47FAA] gi|317385026|gb|EFV65979.1| cytosine/adenosine deaminase [Bacteroides sp. 3_1_40A] Length = 144 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 61/149 (40%), Positives = 81/149 (54%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL EA AA + E+PVGAV V ++II R N L DVTAHAE+ AI Sbjct: 1 MADDTYYMKQALMEAVKAAEQGEVPVGAVVVCRDRIIGRGHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L E LYVT+EPC MCA AI+ A+ +L +GA +PK G Q Y Sbjct: 61 AAANTLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDPK-----RGYQKYAPD 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI ++++DFFK++R Sbjct: 116 ALHPKTIVVKGILADECVRLMKDFFKKKR 144 >gi|324989861|gb|EGC21804.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK353] gi|325686683|gb|EGD28709.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK72] Length = 156 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 61/149 (40%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEVFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 66 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+QDFF+ RR Sbjct: 126 RLNHRVEVEVGVLQEECAQIMQDFFRNRR 154 >gi|228472860|ref|ZP_04057617.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga gingivalis ATCC 33624] gi|228275442|gb|EEK14219.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga gingivalis ATCC 33624] Length = 145 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 84/143 (58%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EAQ A + E+PVGAV + +II++A N +L DVTAHAE+ AI L Sbjct: 8 FMQKALQEAQIAFEQGEVPVGAVITIGERIIAKAHNLTEKLTDVTAHAEMQAITAASEYL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC MCA A+ ++I ++ YGA++ K G G H Sbjct: 68 GGKYLMDCTLYVTLEPCVMCAGALYWSQIGKVVYGATDSKRGYHLFGNLL------HPKT 121 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E+ QI++DFF +RR Sbjct: 122 QVVQGVLEEPCSQIVKDFFLQRR 144 >gi|167765018|ref|ZP_02437139.1| hypothetical protein BACSTE_03412 [Bacteroides stercoris ATCC 43183] gi|167697687|gb|EDS14266.1| hypothetical protein BACSTE_03412 [Bacteroides stercoris ATCC 43183] Length = 144 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 79/143 (55%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EAQ A R E+PVGAV V ++II+RA N L DVTAHAE+ AI L Sbjct: 6 YMKQALLEAQKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAAAATL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L E LYVT+EPC MCA AI+ A++ RL +GA + K G Q Y H Sbjct: 66 GGKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAEDEK-----RGYQRYAPKALHPKT 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ +++DFF +R Sbjct: 121 AVVKGVLADECAALMKDFFAAKR 143 >gi|150004434|ref|YP_001299178.1| putative cytosine/adenosine deaminase [Bacteroides vulgatus ATCC 8482] gi|212695454|ref|ZP_03303582.1| hypothetical protein BACDOR_05008 [Bacteroides dorei DSM 17855] gi|237708840|ref|ZP_04539321.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237724273|ref|ZP_04554754.1| cytosine deaminase [Bacteroides sp. D4] gi|265755901|ref|ZP_06090368.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|294775508|ref|ZP_06741020.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides vulgatus PC510] gi|149932858|gb|ABR39556.1| putative cytosine/adenosine deaminase [Bacteroides vulgatus ATCC 8482] gi|212661991|gb|EEB22565.1| hypothetical protein BACDOR_05008 [Bacteroides dorei DSM 17855] gi|229437461|gb|EEO47538.1| cytosine deaminase [Bacteroides dorei 5_1_36/D4] gi|229457266|gb|EEO62987.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263233979|gb|EEZ19580.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|294450653|gb|EFG19141.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides vulgatus PC510] Length = 144 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 81/149 (54%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL EA AA + E+PVGAV V ++II R N L DVTAHAE+ A+ Sbjct: 1 MADDTYYMKQALMEAVKAAEQGEVPVGAVVVCRDRIIGRGHNLTETLNDVTAHAEMQAVT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L E LYVT+EPC MCA AI+ A+ +L +GA +PK G Q Y Sbjct: 61 AAANTLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDPK-----RGYQKYAPD 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI ++++DFFK++R Sbjct: 116 ALHPKTIVVKGILADECARLMKDFFKKKR 144 >gi|293570161|ref|ZP_06681239.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1071] gi|291587310|gb|EFF19196.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1071] Length = 171 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 54/139 (38%), Positives = 78/139 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA+ A + +E+P+GAV VL+ K+I R N +D T HAE+LAI+ C + Sbjct: 14 WMRLALAEAKKAEMLHEVPIGAVVVLDGKVIGRGYNLRETTQDATTHAEMLAIKEACEKV 73 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VTLEPC MC+ A+ L+R+ +Y+GA +PKGG +H Sbjct: 74 GSWRLEDAALFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERFNHQA 133 Query: 127 EIYPGISEQRSRQIIQDFF 145 + GI E I+ DFF Sbjct: 134 YVEGGILEDECGMILTDFF 152 >gi|224538014|ref|ZP_03678553.1| hypothetical protein BACCELL_02903 [Bacteroides cellulosilyticus DSM 14838] gi|224520361|gb|EEF89466.1| hypothetical protein BACCELL_02903 [Bacteroides cellulosilyticus DSM 14838] Length = 144 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 82/145 (56%), Gaps = 5/145 (3%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N +M AL EA+ A+ R E+PVGAV V ++II+RA N L DVTAHAE+ AI Sbjct: 4 NYYMKQALIEARKASERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAAAS 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + L E LYVT+EPC MCA AI+ A++ RL +GA + K G Q Y H Sbjct: 64 TLGGKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAGDEK-----RGYQRYASQALHP 118 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + G+ + +++DFF +R Sbjct: 119 KTAVSQGVLGEECAVLMKDFFAAKR 143 >gi|27467245|ref|NP_763882.1| Cu binding protein (Mn oxidation [Staphylococcus epidermidis ATCC 12228] gi|27314788|gb|AAO03924.1|AE016745_23 Cu binding protein (Mn oxidation [Staphylococcus epidermidis ATCC 12228] gi|329734672|gb|EGG70979.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus epidermidis VCU028] Length = 168 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKK + +M A+ EA A E+P+GAV V ++I+RA N L+ TAHAE +AI Sbjct: 1 MKKNHDYMRLAINEAHKAKALGEVPIGAVIVKEGQVIARAHNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L E LYVTLEPC MCA I ++RI ++ YGA++PKGG + Sbjct: 61 RASEVVGSWRLEECTLYVTLEPCVMCAGTIIMSRIPKVVYGATDPKGGCSGSLMNLLEQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E+ ++++ FFKE R Sbjct: 121 QFNHRATVEKGILEEECAELLRSFFKEIR 149 >gi|197335350|ref|YP_002155408.1| tRNA-specific adenosine deaminase [Vibrio fischeri MJ11] gi|197316840|gb|ACH66287.1| tRNA-specific adenosine deaminase [Vibrio fischeri MJ11] Length = 174 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 59/144 (40%), Positives = 82/144 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + +M A+E A A E+PVGAV VL+++II NR+ D TAHAE++AI+ Sbjct: 8 RDASFYMQRAMELAAIAEQEGEVPVGAVIVLDDEIIGEGWNRSISTHDATAHAEMMAIKQ 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L + LYVTLEPC MCA AI +RI+R+ +GAS+ K G + +T AT Sbjct: 68 AGSKIENYRLVDATLYVTLEPCPMCAGAIVHSRIKRVIFGASDMKTGASGSVINLFTSAT 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 HS E G+ E R +Q FF Sbjct: 128 AFHSVECESGVMEDACRSQLQAFF 151 >gi|69245245|ref|ZP_00603323.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Enterococcus faecium DO] gi|257880130|ref|ZP_05659783.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,230,933] gi|257882362|ref|ZP_05662015.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,502] gi|257885559|ref|ZP_05665212.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,501] gi|257891221|ref|ZP_05670874.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,410] gi|257894033|ref|ZP_05673686.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,408] gi|258614535|ref|ZP_05712305.1| cytidine/deoxycytidylate deaminase family protein [Enterococcus faecium DO] gi|260560261|ref|ZP_05832437.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium C68] gi|293560645|ref|ZP_06677132.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1162] gi|294617818|ref|ZP_06697430.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1679] gi|294621156|ref|ZP_06700343.1| tRNA-specific adenosine deaminase [Enterococcus faecium U0317] gi|314938786|ref|ZP_07846059.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0133a04] gi|314941552|ref|ZP_07848438.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0133C] gi|314947607|ref|ZP_07851016.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0082] gi|314951363|ref|ZP_07854416.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0133A] gi|314993109|ref|ZP_07858496.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0133B] gi|314996760|ref|ZP_07861775.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0133a01] gi|68195920|gb|EAN10354.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Enterococcus faecium DO] gi|257814358|gb|EEV43116.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,230,933] gi|257818020|gb|EEV45348.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,502] gi|257821415|gb|EEV48545.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,501] gi|257827581|gb|EEV54207.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,410] gi|257830412|gb|EEV57019.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,408] gi|260073606|gb|EEW61932.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium C68] gi|291595929|gb|EFF27210.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1679] gi|291599272|gb|EFF30302.1| tRNA-specific adenosine deaminase [Enterococcus faecium U0317] gi|291605396|gb|EFF34843.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1162] gi|313589110|gb|EFR67955.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0133a01] gi|313592389|gb|EFR71234.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0133B] gi|313596469|gb|EFR75314.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0133A] gi|313599640|gb|EFR78483.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0133C] gi|313641895|gb|EFS06475.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0133a04] gi|313645848|gb|EFS10428.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0082] Length = 171 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 54/139 (38%), Positives = 78/139 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA+ A + +E+P+GAV VL+ K+I R N +D T HAE+LAI+ C + Sbjct: 14 WMRLALAEAKKAEMLHEVPIGAVVVLDGKVIGRGYNLRETTQDATTHAEMLAIKEACEKV 73 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VTLEPC MC+ A+ L+R+ +Y+GA +PKGG +H Sbjct: 74 GSWRLEDAALFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERFNHQA 133 Query: 127 EIYPGISEQRSRQIIQDFF 145 + GI E I+ DFF Sbjct: 134 YVEGGILEDECGMILTDFF 152 >gi|149182698|ref|ZP_01861165.1| probable cytidine/deoxycytidylate deaminase family protein [Bacillus sp. SG-1] gi|148849608|gb|EDL63791.1| probable cytidine/deoxycytidylate deaminase family protein [Bacillus sp. SG-1] Length = 173 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 82/144 (56%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K FM A++EA+ A + E+P+GAV VL+ ++I+ A N ++ HAE+LAI Sbjct: 4 KQEYFMKLAIDEAKKAEDKAEVPIGAVVVLDGEVIASAHNLRETTQNAVTHAELLAIEEA 63 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C+ L L +LYVTLEPC MC+ AI L+RI+ + YGA +PK G Sbjct: 64 CKKLGTWRLENAELYVTLEPCPMCSGAIILSRIKTVVYGAPDPKAGCAGTLMNLLEDDRF 123 Query: 123 HHSPEIYPGISEQRSRQIIQDFFK 146 +H E+ PG+ ++ Q++ FF+ Sbjct: 124 NHQCEVVPGVLQEECGQLLTHFFR 147 >gi|296131565|ref|YP_003638812.1| CMP/dCMP deaminase zinc-binding protein [Thermincola sp. JR] gi|296030143|gb|ADG80911.1| CMP/dCMP deaminase zinc-binding protein [Thermincola potens JR] Length = 155 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 87/144 (60%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALEEA+ A E+P+GAV V+ + +++RA N + KD TAHAE++AI+ + L Sbjct: 11 YMQLALEEARAAFKLGEVPIGAVIVIGDDVVARAHNMKEQWKDATAHAELVAIKEAVQKL 70 Query: 67 SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + LYVT+EPC MCA A+ +RI ++ YGA++PK G + + +H Sbjct: 71 GHWRYLKDAALYVTIEPCPMCAGAMVQSRIEKVVYGAADPKAGAMGSLMNLAQDPRLNHR 130 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ +++++FF+ R Sbjct: 131 VEVVAGVLEEECSELMKEFFRRLR 154 >gi|113867903|ref|YP_726392.1| cytosine deaminase [Ralstonia eutropha H16] gi|113526679|emb|CAJ93024.1| cytosine deaminase [Ralstonia eutropha H16] Length = 200 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/139 (40%), Positives = 82/139 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALEEA+ A E+PVGAV V N+ II+R N D +AHAE+ A+R +++ Sbjct: 29 YMRAALEEARLAEAAGEVPVGAVVVWNDTIIARGHNLPIRSVDPSAHAEMQALRAAAQVI 88 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 +PE +LYVTLEPC MC+ AI AR+R + +GA++PK G + + A +H Sbjct: 89 GNYRMPECELYVTLEPCVMCSGAILHARLRHVVFGAADPKTGAAGSVLNLFEQAQLNHQT 148 Query: 127 EIYPGISEQRSRQIIQDFF 145 I G+ Q+++DFF Sbjct: 149 TIAGGVLADTCGQMLKDFF 167 >gi|29347644|ref|NP_811147.1| putative cytosine/adenosine deaminase [Bacteroides thetaiotaomicron VPI-5482] gi|29339545|gb|AAO77341.1| putative cytosine/adenosine deaminase [Bacteroides thetaiotaomicron VPI-5482] Length = 147 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 78/143 (54%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA AA R E+PVGAV V +II+RA N L DVTAHAE+ AI +L Sbjct: 9 FMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAITAAANVL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y H Sbjct: 69 GGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDDK-----RGYQRYAAQALHPKT 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI +++DFF +R Sbjct: 124 VVVKGILADECATLMKDFFASKR 146 >gi|315223581|ref|ZP_07865436.1| tRNA-specific adenosine deaminase [Capnocytophaga ochracea F0287] gi|314946497|gb|EFS98491.1| tRNA-specific adenosine deaminase [Capnocytophaga ochracea F0287] Length = 158 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 6/149 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM ALEEAQ A +EIPVGA+ ++N+II++A N L DVTAHAE+ AI Sbjct: 15 MNTDEYFMQKALEEAQLAFEEDEIPVGAIITIDNRIIAKAHNLTERLNDVTAHAEMQAIT 74 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M L + L +Y+TLEPC MCA A+ +++ RL Y A + G G + Sbjct: 75 MAAHYLGGKYLTGCTMYLTLEPCAMCAGALYWSQLSRLVYAAPDTHRGYSVMGGKL---- 130 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI Q + +++ FF+++R Sbjct: 131 --HPKTEVVTGILSQEATALLKQFFQQKR 157 >gi|253572102|ref|ZP_04849506.1| cytosine deaminase [Bacteroides sp. 1_1_6] gi|298383486|ref|ZP_06993047.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 1_1_14] gi|251838282|gb|EES66369.1| cytosine deaminase [Bacteroides sp. 1_1_6] gi|298263090|gb|EFI05953.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 1_1_14] Length = 146 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 78/143 (54%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA AA R E+PVGAV V +II+RA N L DVTAHAE+ AI +L Sbjct: 8 FMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAITAAANVL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y H Sbjct: 68 GGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDDK-----RGYQRYAAQALHPKT 122 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI +++DFF +R Sbjct: 123 VVVKGILADECATLMKDFFASKR 145 >gi|325911630|ref|ZP_08174038.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners UPII 143-D] gi|325476616|gb|EGC79774.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners UPII 143-D] Length = 158 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 83/143 (58%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A EA A + EIP+GAV V +I R NR +D T HAEI+AI+ C+ L Sbjct: 11 MKLAFLEADKAEQQGEIPIGAVIVDAKGNLIGRGYNRRELDEDATRHAEIIAIQEACKNL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L+VTLEPC MCA AI AR++ +YYGA +PK G + + +H P Sbjct: 71 NSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFTKFNHHP 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I+ G+ +++ Q +++FFK R Sbjct: 131 QIFGGLYREQAAQQLKNFFKNIR 153 >gi|329729486|gb|EGG65889.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus epidermidis VCU144] Length = 168 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKK + +M A+ EA A E+P+GAV V ++I+RA N L+ TAHAE +AI Sbjct: 1 MKKNHDYMRLAINEAHKAKALGEVPIGAVIVKEGQVIARAHNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L E LYVTLEPC MCA I ++RI ++ YGA++PKGG + Sbjct: 61 RASEVVGSWRLEECTLYVTLEPCVMCAGTIIMSRIPKVVYGATDPKGGCSGSLMNLLEQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E+ ++++ FFKE R Sbjct: 121 QFNHRATVEKGILEEECAELLRSFFKEIR 149 >gi|154484290|ref|ZP_02026738.1| hypothetical protein EUBVEN_02003 [Eubacterium ventriosum ATCC 27560] gi|149734767|gb|EDM50684.1| hypothetical protein EUBVEN_02003 [Eubacterium ventriosum ATCC 27560] Length = 178 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/148 (38%), Positives = 84/148 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 KK N +M A+++A+ AA E+P+G V V +KII R NR K+ +HAE+ AI+ Sbjct: 25 KKANKYMKEAIKQAKKAASIGEVPIGCVIVYQDKIIGRGYNRRMVDKNTLSHAELNAIKK 84 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L + +LYVT EPC MCA AI ARI+++Y G NPK G + + Sbjct: 85 ASKKLDDWRLDDCELYVTTEPCQMCAGAIVQARIKKVYIGCMNPKAGCAGSIMNLLQVDK 144 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E+ +++DFF+ R Sbjct: 145 FNHQVEMEKGILEEECSNLLKDFFRNLR 172 >gi|57866115|ref|YP_187800.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus epidermidis RP62A] gi|242241897|ref|ZP_04796342.1| deaminase [Staphylococcus epidermidis W23144] gi|251809981|ref|ZP_04824454.1| deaminase [Staphylococcus epidermidis BCM-HMP0060] gi|282874984|ref|ZP_06283859.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus epidermidis SK135] gi|57636773|gb|AAW53561.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus epidermidis RP62A] gi|242234675|gb|EES36987.1| deaminase [Staphylococcus epidermidis W23144] gi|251806524|gb|EES59181.1| deaminase [Staphylococcus epidermidis BCM-HMP0060] gi|281296312|gb|EFA88831.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus epidermidis SK135] Length = 168 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKK + +M A+ EA A E+P+GAV V +++I+RA N L+ TAHAE +AI Sbjct: 1 MKKNHDYMRLAINEAHKAKALGEVPIGAVIVKEDQVIARAHNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L E LYVTLEPC MCA I ++RI ++ YGA++PKGG + Sbjct: 61 RASEVVGSWRLEECTLYVTLEPCVMCAGTIIMSRIPKVVYGATDPKGGCSGSLMNLLEQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E+ ++++ FFKE R Sbjct: 121 QFNHRAIVEKGILEEECAELLRSFFKEIR 149 >gi|189462552|ref|ZP_03011337.1| hypothetical protein BACCOP_03242 [Bacteroides coprocola DSM 17136] gi|189430713|gb|EDU99697.1| hypothetical protein BACCOP_03242 [Bacteroides coprocola DSM 17136] Length = 144 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/149 (41%), Positives = 82/149 (55%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL EAQ AA R E+PVGAV V ++II+R+ N L DVTAHAE+ AI Sbjct: 1 MADDVFYMKQALIEAQKAADRGEVPVGAVVVCRDRIIARSHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y Sbjct: 61 AAANTLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEK-----RGYQRYAPD 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI Q+++ FFK++R Sbjct: 116 ALHPKTVVVKGILADDCAQLMKGFFKKKR 144 >gi|325697330|gb|EGD39216.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK160] Length = 165 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 15 IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 74 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 75 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 134 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+QDFF++RR Sbjct: 135 RLNHRVEVETGVLQEECAQIMQDFFRQRR 163 >gi|261208197|ref|ZP_05922870.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium TC 6] gi|289566587|ref|ZP_06447008.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium D344SRF] gi|294615830|ref|ZP_06695673.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1636] gi|260077454|gb|EEW65172.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium TC 6] gi|289161632|gb|EFD09511.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium D344SRF] gi|291591320|gb|EFF22986.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1636] Length = 171 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 53/139 (38%), Positives = 78/139 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA+ A + +E+P+GAV VL+ K++ R N +D T HAE+LAI+ C + Sbjct: 14 WMRLALAEAKKAEMLHEVPIGAVVVLDGKVVGRGYNLRETTQDATTHAEMLAIKEACEKV 73 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VTLEPC MC+ A+ L+R+ +Y+GA +PKGG +H Sbjct: 74 GSWRLEDATLFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERFNHQA 133 Query: 127 EIYPGISEQRSRQIIQDFF 145 + GI E I+ DFF Sbjct: 134 YVEGGILEDECGMILTDFF 152 >gi|259501366|ref|ZP_05744268.1| tRNA-specific adenosine deaminase [Lactobacillus iners DSM 13335] gi|302190913|ref|ZP_07267167.1| hypothetical protein LineA_02730 [Lactobacillus iners AB-1] gi|309808233|ref|ZP_07702142.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LactinV 01V1-a] gi|312872162|ref|ZP_07732235.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LEAF 2062A-h1] gi|312873556|ref|ZP_07733603.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LEAF 2052A-d] gi|312875738|ref|ZP_07735733.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LEAF 2053A-b] gi|325912947|ref|ZP_08175321.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners UPII 60-B] gi|259167219|gb|EEW51714.1| tRNA-specific adenosine deaminase [Lactobacillus iners DSM 13335] gi|308168521|gb|EFO70630.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LactinV 01V1-a] gi|311088730|gb|EFQ47179.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LEAF 2053A-b] gi|311090809|gb|EFQ49206.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LEAF 2052A-d] gi|311092246|gb|EFQ50617.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LEAF 2062A-h1] gi|325477761|gb|EGC80899.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners UPII 60-B] Length = 158 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 83/143 (58%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A EA A + EIP+GAV V +I R NR +D T HAEI+AI+ C+ L Sbjct: 11 MKLAFLEADKAEQQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQEACKNL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L+VTLEPC MCA AI AR++ +YYGA +PK G + + +H P Sbjct: 71 NSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFTKFNHHP 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I+ G+ +++ Q +++FFK R Sbjct: 131 QIFGGLYREQAAQQLKNFFKNIR 153 >gi|76789589|ref|YP_328675.1| tRNA-specific adenosine deaminase [Chlamydia trachomatis A/HAR-13] gi|237803276|ref|YP_002888470.1| Cytosine deaminase [Chlamydia trachomatis B/Jali20/OT] gi|237805197|ref|YP_002889351.1| Cytosine deaminase [Chlamydia trachomatis B/TZ1A828/OT] gi|76168119|gb|AAX51127.1| tRNA-specific adenosine deaminase [Chlamydia trachomatis A/HAR-13] gi|231273497|emb|CAX10413.1| Cytosine deaminase [Chlamydia trachomatis B/TZ1A828/OT] gi|231274510|emb|CAX11306.1| Cytosine deaminase [Chlamydia trachomatis B/Jali20/OT] Length = 163 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM AL+EA+ A ++E+PVG + V +KII+R N +LKD TAHAE++ I Sbjct: 3 IEKDLFFMKKALDEARKAYEQDEVPVGCIIVHGDKIIARGHNSVEQLKDSTAHAEMICIS 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L + LY TLEPC MCA AI LARI R+ +GA + + G + + Sbjct: 63 AAAEYLENWRLKDTILYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEK 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E G+ Q S Q++++FF E+R Sbjct: 123 HPFHQVECCSGVCYQESEQLMKNFFLEKR 151 >gi|315653116|ref|ZP_07906041.1| tRNA-specific adenosine deaminase [Lactobacillus iners ATCC 55195] gi|315489481|gb|EFU79118.1| tRNA-specific adenosine deaminase [Lactobacillus iners ATCC 55195] Length = 158 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 83/143 (58%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A EA A + EIP+GAV V +I R NR +D T HAEI+AI+ C+ L Sbjct: 11 MKLAFLEADKAEKQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQEACKNL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L+VTLEPC MCA AI AR++ +YYGA +PK G + + +H P Sbjct: 71 NSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFTKFNHHP 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I+ G+ +++ Q +++FFK R Sbjct: 131 QIFGGLYREQAAQQLKNFFKNIR 153 >gi|260592642|ref|ZP_05858100.1| tRNA-specific adenosine deaminase [Prevotella veroralis F0319] gi|260535412|gb|EEX18029.1| tRNA-specific adenosine deaminase [Prevotella veroralis F0319] Length = 150 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 85/149 (57%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +KK FM A++EA+ A EIP+GAV V ++II+RA N L DVTAHAE+ AI Sbjct: 7 IKKDMYFMQRAIDEAKAAYREGEIPIGAVVVCRDRIIARAHNLTETLNDVTAHAEMQAIT 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + L + LYVT+EPC MCA AI A++ R+ YG + I+ G Y Sbjct: 67 IAESELGGKYLQDCTLYVTVEPCIMCAGAIGWAQLHRIVYGCPD-----IKRGYHEYAPK 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E+ + ++Q FF+ERR Sbjct: 122 AFHPKANVTSGVLEEECKALMQRFFQERR 150 >gi|300362312|ref|ZP_07058488.1| cytidine/deoxycytidylate deaminase [Lactobacillus gasseri JV-V03] gi|300353303|gb|EFJ69175.1| cytidine/deoxycytidylate deaminase [Lactobacillus gasseri JV-V03] Length = 160 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 87/144 (60%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRI 65 +M A +A+ A + E+P+GA+ V + + G REL +D T HAE++AIR C+ Sbjct: 10 YMQLAFAQAKKAEDQGEVPIGAIVVDKDGNVIGEGYNRRELDEDATQHAEMIAIREACKN 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + L++TLEPC MC+ AI +R+ +YYGA +PK G + + + +H Sbjct: 70 LGSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAAGSVIDLFKVEKFNHH 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P+++ G+ + ++ Q+++DFF+E R Sbjct: 130 PQVFGGLFKDQAAQMLKDFFREIR 153 >gi|309806673|ref|ZP_07700669.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LactinV 03V1-b] gi|308166978|gb|EFO69161.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LactinV 03V1-b] Length = 148 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 83/143 (58%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A EA A + EIP+GAV V +I R NR +D T HAEI+AI+ C+ L Sbjct: 1 MKLAFLEADKAEQQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQEACKNL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L+VTLEPC MCA AI AR++ +YYGA +PK G + + +H P Sbjct: 61 NSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFTKFNHHP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I+ G+ +++ Q +++FFK R Sbjct: 121 QIFGGLYREQAAQQLKNFFKNIR 143 >gi|302390826|ref|YP_003826646.1| tRNA-adenosine deaminase [Acetohalobium arabaticum DSM 5501] gi|302202903|gb|ADL11581.1| tRNA-adenosine deaminase [Acetohalobium arabaticum DSM 5501] Length = 155 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EAQ A + E+P+GAV V +++I+R+ N +L D TAHAEILAI+ L Sbjct: 8 YMKLALAEAQKAYDKAEVPIGAVVVKGDEVIARSHNLREKLADPTAHAEILAIKEAANTL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +YVT+EPC MCA A+ AR+ RL YG ++ K G + + +H Sbjct: 68 GDWRLYNCTIYVTVEPCVMCAGALVQARVERLVYGTADLKAGAAGSILDLVQFSDFNHQL 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ I E + I++ FF++ R Sbjct: 128 EVKSAILEDECKDIMESFFQDLR 150 >gi|85712706|ref|ZP_01043751.1| Cytosine/adenosine deaminase putative [Idiomarina baltica OS145] gi|85693438|gb|EAQ31391.1| Cytosine/adenosine deaminase putative [Idiomarina baltica OS145] Length = 179 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M ++M ALE A AA +E+PVGAV VLN+ I+ N+ L D +AHAE AIR Sbjct: 15 MTTDEIYMQRALELAHKAADEDEVPVGAVLVLNDMIVGEGYNQVITLSDPSAHAEAQAIR 74 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L + LYVTLEPC MCA I+ AR++RL +GA +P+ G + Sbjct: 75 AAGKNVDNYRLTDSTLYVTLEPCAMCAGLITHARVKRLVFGAPDPRTGATGTAIEVLNHV 134 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +H E+ G+ + I++ FF+ RR Sbjct: 135 SMNHRVEVTSGVLAEPCGDILRQFFRARR 163 >gi|261855229|ref|YP_003262512.1| CMP/dCMP deaminase zinc-binding protein [Halothiobacillus neapolitanus c2] gi|261835698|gb|ACX95465.1| CMP/dCMP deaminase zinc-binding protein [Halothiobacillus neapolitanus c2] Length = 153 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ AL+EA AA E+PVGAV V K+I+ N L D +AHAEILA+R L Sbjct: 11 FIQQALDEANLAAADGEVPVGAVVVRQGKVIATGRNAPIRLNDPSAHAEILALRAAGMAL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC MC AAIS ARI R+ + A +P+ G HHS Sbjct: 71 ANYRLDDCTLYVTLEPCPMCMAAISHARIARVVFAAPDPRAGACGGAIDLNRAPWHHHSV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G EQ + ++++ FF+E+R Sbjct: 131 VVDTGPCEQEAAELLRHFFQEKR 153 >gi|118595115|ref|ZP_01552462.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Methylophilales bacterium HTCC2181] gi|118440893|gb|EAV47520.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Methylophilales bacterium HTCC2181] Length = 149 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/142 (42%), Positives = 81/142 (57%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ A +E+PVGAV V +N II R N + D T HAE+ AIR R + Sbjct: 1 MQEALAMAKIAYANHEVPVGAVIVNDNIIIGRGCNELIQKNDPTGHAEMHAIREAARTIK 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L D+YVTLEPC MC AI +RI+ L++GA + K G E+ + T +H Sbjct: 61 NYRLTNCDIYVTLEPCPMCIGAIFNSRIKNLFFGAYDHKTGVCESVVNLGSFKTLNHHCN 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I+ GI E S+ I+Q FF+ERR Sbjct: 121 IFGGILENESKNILQKFFRERR 142 >gi|166154188|ref|YP_001654306.1| cytosine deaminase [Chlamydia trachomatis 434/Bu] gi|166155063|ref|YP_001653318.1| cytosine deaminase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|255311685|ref|ZP_05354255.1| cytosine deaminase [Chlamydia trachomatis 6276] gi|255317986|ref|ZP_05359232.1| cytosine deaminase [Chlamydia trachomatis 6276s] gi|255349249|ref|ZP_05381256.1| cytosine deaminase [Chlamydia trachomatis 70] gi|255503786|ref|ZP_05382176.1| cytosine deaminase [Chlamydia trachomatis 70s] gi|255507467|ref|ZP_05383106.1| cytosine deaminase [Chlamydia trachomatis D(s)2923] gi|301335433|ref|ZP_07223677.1| cytosine deaminase [Chlamydia trachomatis L2tet1] gi|165930176|emb|CAP03660.1| Cytosine deaminase [Chlamydia trachomatis 434/Bu] gi|165931051|emb|CAP06614.1| Cytosine deaminase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|289525890|emb|CBJ15372.1| Cytosine deaminase [Chlamydia trachomatis Sweden2] gi|296435476|gb|ADH17654.1| cytosine deaminase [Chlamydia trachomatis E/150] gi|296437331|gb|ADH19501.1| cytosine deaminase [Chlamydia trachomatis G/11222] gi|296439193|gb|ADH21346.1| cytosine deaminase [Chlamydia trachomatis E/11023] Length = 163 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM AL+EA+ A ++E+PVG + V +KII+R N +LKD TAHAE++ I Sbjct: 3 IEKDLFFMKKALDEARKAYEQDEVPVGCIIVHGDKIIARGHNSVEQLKDPTAHAEMICIS 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L + LY TLEPC MCA AI LARI R+ +GA + + G + + Sbjct: 63 AAAEYLENWRLKDTILYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEK 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E G+ Q S Q++++FF E+R Sbjct: 123 HPFHQVECCSGVCYQESEQLMKNFFLEKR 151 >gi|86607357|ref|YP_476120.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Synechococcus sp. JA-3-3Ab] gi|86555899|gb|ABD00857.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Synechococcus sp. JA-3-3Ab] Length = 174 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/150 (38%), Positives = 85/150 (56%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ +M AL+EA+ A E+PV A+ V ++++ + NR +D TAHAEILA+ Sbjct: 19 WQRHRAWMQLALQEAERAGEAGEVPVAALVVGPGEELLALSSNRRERDRDPTAHAEILAL 78 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + L L LYVTLEPC MCA AIS +R+ ++ YGA +PK G + + Sbjct: 79 RQAGQRLGDWQLQGCRLYVTLEPCPMCAGAISQSRLAQVIYGADDPKAGALRSVLNLPAS 138 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A H PE+ G+ E R+++Q +F RR Sbjct: 139 AASFHCPEVIGGVCEAECRRLLQQWFSRRR 168 >gi|312279157|gb|ADQ63814.1| Cytidine/deoxycytidylate deaminase family protein, putative [Streptococcus thermophilus ND03] Length = 172 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 83/144 (57%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FMS AL+EAQ + + EIP+G V V + +I+ R N EL HAE++AI+ R Sbjct: 11 IFMSEALKEAQKSLDKAEIPIGCVIVKDKEIVGRGHNAREELNQAIMHAEVMAIQEANRT 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L + L+VT+EPC MC+ AI LARI ++ YGA N K GG + +H Sbjct: 71 VGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDERLNHR 130 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E +I+QDFF++ R Sbjct: 131 VEVETGVMEADCAKIMQDFFRQSR 154 >gi|116629038|ref|YP_814210.1| cytosine/adenosine deaminase [Lactobacillus gasseri ATCC 33323] gi|238853616|ref|ZP_04643985.1| tRNA-specific adenosine deaminase [Lactobacillus gasseri 202-4] gi|311111167|ref|ZP_07712564.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus gasseri MV-22] gi|116094620|gb|ABJ59772.1| tRNA-adenosine deaminase [Lactobacillus gasseri ATCC 33323] gi|238833760|gb|EEQ26028.1| tRNA-specific adenosine deaminase [Lactobacillus gasseri 202-4] gi|311066321|gb|EFQ46661.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus gasseri MV-22] Length = 160 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 87/144 (60%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRI 65 +M A +A+ A + E+P+GA+ V + + G REL +D T HAE++AIR C+ Sbjct: 10 YMQLAFAQAKKAEDQGEVPIGAIVVDKDGNVIGEGYNRRELDEDATQHAEMIAIRQACQN 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + L++TLEPC MC+ AI +R+ +YYGA +PK G + + + +H Sbjct: 70 LGSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAAGSVIDLFKVEKFNHH 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P+++ G+ + ++ Q+++DFF+E R Sbjct: 130 PKVFGGLFKDQAAQMLKDFFREIR 153 >gi|329121024|ref|ZP_08249655.1| tRNA-specific adenosine deaminase [Dialister micraerophilus DSM 19965] gi|327471186|gb|EGF16640.1| tRNA-specific adenosine deaminase [Dialister micraerophilus DSM 19965] Length = 149 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 87/142 (61%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ A++EA+ A + NE+P+GA+ + II+ + N + K++ HAEILAI+ ++L Sbjct: 6 YMTLAIQEAKKAYMNNEMPIGAIITYKDIIIANSYNECEKNKNIFDHAEILAIKKASKLL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVT+EPC MCA AI +RI RL +GA N GGI + + ++ +H+ Sbjct: 66 NTSRLTGCTLYVTIEPCPMCAGAIMHSRIDRLVFGAFNDLYGGIISKYKIGKDSSMNHTL 125 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 + GI E +Q++ DFFK + Sbjct: 126 SVVSGIEENTCKQLVCDFFKNK 147 >gi|312870914|ref|ZP_07731019.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LEAF 3008A-a] gi|311093604|gb|EFQ51943.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LEAF 3008A-a] Length = 158 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 83/143 (58%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A EA A + EIP+GAV V +I R NR +D T HAEI+AI+ C+ L Sbjct: 11 MKLAFLEADKAEQQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQEACKNL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L+VTLEPC MCA AI AR++ +YYGA +PK G + + +H P Sbjct: 71 NSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFTKFNHHP 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I+ G+ +++ Q +++FFK R Sbjct: 131 QIFGGLYREQAAQQLKNFFKNIR 153 >gi|312862370|ref|ZP_07722613.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus vestibularis F0396] gi|311102013|gb|EFQ60213.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus vestibularis F0396] Length = 172 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FMS AL+EAQ + + EIP+G V V + +I+ R N EL HAE++AI+ R + Sbjct: 12 FMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAEVMAIQEANRTV 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LARI ++ YGA N K GG + +H Sbjct: 72 GNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDERLNHRV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ +I+QDFF++ R Sbjct: 132 EVETGVMEEECAKIMQDFFRQSR 154 >gi|258649234|ref|ZP_05736703.1| tRNA-specific adenosine deaminase [Prevotella tannerae ATCC 51259] gi|260850414|gb|EEX70283.1| tRNA-specific adenosine deaminase [Prevotella tannerae ATCC 51259] Length = 143 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 82/143 (57%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA+ A E+PVGAV V ++II+RA N L DVTAHAE+ AI L Sbjct: 6 YMQKALIEAKQAFEEGEVPVGAVIVCRDRIIARAHNLTERLTDVTAHAEMQAITAAANAL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVT+EPC MCA A++ A++ R+ YGAS+PK G + H Sbjct: 66 GGKYLTDCTLYVTVEPCVMCAGALAWAQLSRIVYGASDPK-----RGFSVFAPNALHPRT 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + +++DFF+ RR Sbjct: 121 EVTEGVLAEECANLMKDFFQRRR 143 >gi|15834852|ref|NP_296611.1| cytidine/deoxycytidylate deaminase family protein [Chlamydia muridarum Nigg] gi|301336416|ref|ZP_07224618.1| cytidine/deoxycytidylate deaminase family protein [Chlamydia muridarum MopnTet14] gi|8163170|gb|AAF73539.1| cytidine/deoxycytidylate deaminase family protein [Chlamydia muridarum Nigg] Length = 157 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM AL+EA+ A +E+PVG + V + II+R N LKD TAHAE++ I Sbjct: 3 IEKDLFFMKKALDEARKAYELDEVPVGCIIVQGDAIIARGHNSVERLKDPTAHAEMICIS 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L + LY TLEPC MCA AI LARI R+ +GA + + G + + Sbjct: 63 AAAEYLQNWRLKDTTLYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEK 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E PGI Q S ++++FF E+R Sbjct: 123 HPFHQVECCPGICHQESEWLMKNFFWEKR 151 >gi|89094120|ref|ZP_01167063.1| hypothetical protein MED92_16295 [Oceanospirillum sp. MED92] gi|89081595|gb|EAR60824.1| hypothetical protein MED92_16295 [Oceanospirillum sp. MED92] Length = 168 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALE A A NE+PVGA+ VL+ +++ N D TAHAE++A+R + + Sbjct: 10 WMERALELADRAEQLNEVPVGALVVLDGEVVGEGWNHPISGNDPTAHAEMMALRAAAQKV 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +L+VT+EPCTMC+ AI ARI+R+ YGA+ K G +++ Q ++ +H Sbjct: 70 GNYRLVGAELFVTIEPCTMCSGAIVHARIKRVIYGATEAKSGAVDSNCQLFSQPWINHDV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ +R + I FF+ RR Sbjct: 130 EITRGVLAERCSKKISAFFQRRR 152 >gi|257876509|ref|ZP_05656162.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus EC20] gi|257810675|gb|EEV39495.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus EC20] Length = 168 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA+ A E+P+GAV VL+ KII R N + AHAE+ AI CR + Sbjct: 15 FMEEAIKEARKAEGLAEVPIGAVVVLDGKIIGRGHNLRETQQQAAAHAEMFAIEEACRTV 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VTLEPC MC+ A+ LAR+ +Y+GA +PKGG +H Sbjct: 75 GSWRLEQAQLFVTLEPCPMCSGAMLLARVEEVYFGAYDPKGGTAGTLMNLLEDERFNHWS 134 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI E+ Q++ DFF+ R Sbjct: 135 YVEGGILEEACGQLLTDFFRALR 157 >gi|313887628|ref|ZP_07821310.1| cytidine and deoxycytidylate deaminase zinc-binding region [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846237|gb|EFR33616.1| cytidine and deoxycytidylate deaminase zinc-binding region [Peptoniphilus harei ACS-146-V-Sch2b] Length = 150 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 82/143 (57%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL + + L +++P+G V V NNKII N+ +LK+ TAHAEI+AI M R L Sbjct: 5 FMKEALRYGRRSLLSDDVPIGCVVVKNNKIIGYGYNKKEDLKNPTAHAEIMAISMAARHL 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L D+YVTLEPC MC AI ARI+ LY+GA N + G + + + L T H Sbjct: 65 NSYHLEGCDIYVTLEPCLMCVGAILNARIKNLYFGARNKRFGAVVSHQKIEKLITNHRIN 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 Y GI E+ +I FF + R Sbjct: 125 YEY-GILERECASLITGFFSDLR 146 >gi|299820898|ref|ZP_07052787.1| tRNA-specific adenosine deaminase [Listeria grayi DSM 20601] gi|299817919|gb|EFI85154.1| tRNA-specific adenosine deaminase [Listeria grayi DSM 20601] Length = 173 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 53/141 (37%), Positives = 83/141 (58%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FM A++EA+ A E+P+GAV VL+N+II R N ++ HAEILAI+ C+ Sbjct: 18 IFMEEAIKEARKAQALGEVPIGAVVVLDNEIIGRGHNLRETTQNAITHAEILAIQAACQN 77 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L E ++YVTLEPC MC+ AI L+R++++YYGA +PK G +H+ Sbjct: 78 RESWRLSEAEIYVTLEPCPMCSGAILLSRLKKVYYGAPDPKAGTAGTLMNLLQDDRFNHT 137 Query: 126 PEIYPGISEQRSRQIIQDFFK 146 E+ G+ + +++ FF+ Sbjct: 138 CEVEAGLLQTECAELLTSFFR 158 >gi|86608124|ref|YP_476886.1| cytidine and deoxycytidylate deaminase family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556666|gb|ABD01623.1| cytidine and deoxycytidylate deaminase family protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 171 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ +M AL EA+ A E+PV A+ V K+++ + NR +D TAHAEILA+ Sbjct: 13 WQRHRAWMQLALREAEQAGEAGEVPVAALVVGPGEKLLALSSNRRERDRDPTAHAEILAL 72 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + L L LYVTLEPC MCA AIS +R+ ++ YGA +PK G + + Sbjct: 73 RQAGQRLGDWQLQGCRLYVTLEPCPMCAGAISQSRLAQVIYGADDPKAGALRSVLNLPAS 132 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A H PE+ G+ E R+++Q +F RR Sbjct: 133 AASFHCPEVIGGVCEAECRRLLQQWFCRRR 162 >gi|293552936|ref|ZP_06673591.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1039] gi|291602912|gb|EFF33109.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1039] Length = 171 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 53/139 (38%), Positives = 78/139 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA+ A + +E+P+GAV VL+ K++ R N +D T HAE+LAI+ C + Sbjct: 14 WMRLALAEAKKAEMLHEVPIGAVVVLDGKVVGRGYNLRETTQDATTHAEMLAIKEACEKV 73 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VTLEPC MC+ A+ L+R+ +Y+GA +PKGG +H Sbjct: 74 GSWRLEDAALFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERFNHQA 133 Query: 127 EIYPGISEQRSRQIIQDFF 145 + GI E I+ DFF Sbjct: 134 YVEGGILEDECGMILTDFF 152 >gi|329957514|ref|ZP_08297989.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides clarus YIT 12056] gi|328522391|gb|EGF49500.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides clarus YIT 12056] Length = 144 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 78/143 (54%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EAQ A R E+PVGAV V ++II+RA N L DVTAHAE+ AI L Sbjct: 6 YMKQALLEAQKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAAAATL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L E LYVT+EPC MCA AI+ A+ RL +GA + K G Q Y H Sbjct: 66 GGKYLNECTLYVTVEPCVMCAGAIAWAQTGRLVFGAEDEK-----RGYQRYAPQALHPKT 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ +++DFF +R Sbjct: 121 SVVKGVLADECAALMKDFFAAKR 143 >gi|191639204|ref|YP_001988370.1| Putative Cytidine/deoxycytidylate deaminase, zinc-binding region YaaJ [Lactobacillus casei BL23] gi|227533725|ref|ZP_03963774.1| zinc-binding cytidine/deoxycytidylate deaminase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|190713506|emb|CAQ67512.1| Putative Cytidine/deoxycytidylate deaminase, zinc-binding region YaaJ [Lactobacillus casei BL23] gi|227188709|gb|EEI68776.1| zinc-binding cytidine/deoxycytidylate deaminase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|327383282|gb|AEA54758.1| Nucleoside deaminase [Lactobacillus casei LC2W] gi|327386465|gb|AEA57939.1| Nucleoside deaminase [Lactobacillus casei BD-II] Length = 168 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/144 (41%), Positives = 81/144 (56%), Gaps = 4/144 (2%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM AL EA+ AA E+P+GAV V +II R N +D T HAE+LAI+ C+ Sbjct: 7 NQFMDAALTEAKKAAAIGEVPIGAVIVHQGEIIGRGYNLRETTQDATHHAEMLAIQAACK 66 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC-- 122 L L + L+VTLEPC MCA A+ AR+ Y+GA++PK G GT + LA Sbjct: 67 TLGTWRLEDCSLFVTLEPCPMCAGAMINARVATCYFGATDPKAG--VAGTFYNLLADTRF 124 Query: 123 HHSPEIYPGISEQRSRQIIQDFFK 146 +H + GI S ++Q FF+ Sbjct: 125 NHQVAVVSGIKADESATLLQTFFR 148 >gi|158319077|ref|YP_001511584.1| CMP/dCMP deaminase zinc-binding [Alkaliphilus oremlandii OhILAs] gi|158139276|gb|ABW17588.1| CMP/dCMP deaminase zinc-binding [Alkaliphilus oremlandii OhILAs] Length = 154 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A + E+P+GAV V +N+II R N K+ +HAEI+AI+ C+ L Sbjct: 7 FMLEAIEEAKKAFNKKEVPIGAVVVKDNEIIGRGHNLRETTKNSISHAEIMAIQEACKFL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVT+EPC MCA AI +RI+++ GA +PK G + + +H Sbjct: 67 GGWRLTDCTLYVTIEPCPMCAGAILQSRIQKVVIGAMDPKAGACGSLVNLLNDSRFNHQT 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ E+ ++++FFK R Sbjct: 127 EIEQGVLEEECSLLMKEFFKALR 149 >gi|239637751|ref|ZP_04678718.1| tRNA-specific adenosine deaminase [Staphylococcus warneri L37603] gi|239596653|gb|EEQ79183.1| tRNA-specific adenosine deaminase [Staphylococcus warneri L37603] Length = 168 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 87/149 (58%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ +M A++EA+ A L E+P+GA+ V N +I+RA N ++ TAHAE LAI Sbjct: 1 METDEYYMKLAIQEAKKAELLGEVPIGAIIVKNGHVIARAHNLRETMQQPTAHAEHLAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L + LYVTLEPC MCA I ++RI + YGA++PKGG + Sbjct: 61 RAAKVLGSWRLEDCTLYVTLEPCVMCAGTIVMSRIPYIKYGAADPKGGCSGSLMNLLNQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E++ ++++FF++ R Sbjct: 121 DFNHRAQVESGLLEEQCGDLLRNFFRKLR 149 >gi|218258211|ref|ZP_03474613.1| hypothetical protein PRABACTJOHN_00267 [Parabacteroides johnsonii DSM 18315] gi|218225660|gb|EEC98310.1| hypothetical protein PRABACTJOHN_00267 [Parabacteroides johnsonii DSM 18315] Length = 147 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 83/143 (58%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+ AA E+PVGAV V NN+II+RA N+ L D TAHAE+LAI +L Sbjct: 10 FMKQALIEARAAAKEGEVPVGAVIVCNNRIIARAHNQTERLNDPTAHAEMLAITAAVGVL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVT+EPC MCA AI +++ ++ YGA++ K G Q Y H Sbjct: 70 GAKYLTGCSLYVTVEPCVMCAGAIGWSQLSKIVYGATDEK-----RGFQQYAPKALHPKS 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E + +++FF+ +R Sbjct: 125 TVKKGVLENECAEEMRNFFQRKR 147 >gi|121604898|ref|YP_982227.1| CMP/dCMP deaminase [Polaromonas naphthalenivorans CJ2] gi|120593867|gb|ABM37306.1| CMP/dCMP deaminase, zinc-binding protein [Polaromonas naphthalenivorans CJ2] Length = 411 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/144 (42%), Positives = 86/144 (59%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL +A+ AA E+PVGAV V K+I+ N E D TAHAEI+A+R Sbjct: 5 AFMEMALVQARVAAAFGEVPVGAVVVRQGKVIATGRNAPVEAHDPTAHAEIMALRAAALA 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L E +L+VTLEPC MC+ A+ AR++R+ +GAS PK G + + A +H Sbjct: 65 LGNYRLDECELFVTLEPCAMCSGAMLNARLKRVVFGASEPKTGAAGSVINLFAQARLNHQ 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + SR ++QDFF++RR Sbjct: 125 TELQGGVLAESSRALLQDFFRQRR 148 >gi|325566945|ref|ZP_08143723.1| tRNA-specific adenosine deaminase [Enterococcus casseliflavus ATCC 12755] gi|325159117|gb|EGC71262.1| tRNA-specific adenosine deaminase [Enterococcus casseliflavus ATCC 12755] Length = 168 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA+ A E+P+GAV VL+ KII R N + AHAE+ AI CR + Sbjct: 15 FMEEAIKEARKAEGVAEVPIGAVVVLDGKIIGRGHNLRETQQQAAAHAEMFAIEEACRTV 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VTLEPC MC+ A+ LAR+ +Y+GA +PKGG +H Sbjct: 75 GSWRLEQAQLFVTLEPCPMCSGAMLLARVEEVYFGAYDPKGGTAGTLMNLLEDERFNHWS 134 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI E+ Q++ DFF+ R Sbjct: 135 YVEGGILEEACGQLLTDFFRALR 157 >gi|300774752|ref|ZP_07084615.1| cytosine deaminase [Chryseobacterium gleum ATCC 35910] gi|300506567|gb|EFK37702.1| cytosine deaminase [Chryseobacterium gleum ATCC 35910] Length = 143 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 81/143 (56%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+EA+ A ++E+P+G V V NN+II+RA N L DVTAHAE+ AI L Sbjct: 7 YMKMALQEAEAALEKDEVPIGCVVVSNNRIIARAHNLTETLNDVTAHAEMQAITSAANFL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVT+EPC MC+ A+S ++I ++ GA + + G I H Sbjct: 67 GGKYLKDCTLYVTMEPCVMCSGALSWSQISKVVIGARDEQRGFINKHLSL------HPKT 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI E I++ FFK +R Sbjct: 121 EVITGIMEAECSSIVKQFFKSKR 143 >gi|261364637|ref|ZP_05977520.1| tRNA-specific adenosine deaminase [Neisseria mucosa ATCC 25996] gi|288567233|gb|EFC88793.1| tRNA-specific adenosine deaminase [Neisseria mucosa ATCC 25996] Length = 243 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ +A EIPVGAV V +N+II+ A N D++ HAEI A+ + L Sbjct: 98 FMRAALVQAEQSARIGEIPVGAVVVADNQIIAAAHNTCVSDHDISRHAEIRALAVAGAAL 157 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E DLY+TLEPC MCA+AI AR+RR+ YGA+ PK G + + + Sbjct: 158 QNYRLDECDLYITLEPCAMCASAIIQARVRRVIYGAAEPKTGAAGSVVNLFANPLLNKHT 217 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI E + ++Q FF+ RR Sbjct: 218 AIKGGILEDECKDVLQAFFQTRR 240 >gi|237745836|ref|ZP_04576316.1| tRNA-specific adenosine deaminase [Oxalobacter formigenes HOxBLS] gi|229377187|gb|EEO27278.1| tRNA-specific adenosine deaminase [Oxalobacter formigenes HOxBLS] Length = 150 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 83/145 (57%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +VFM AL++A A E+PVGAV VL ++I+ N D TAHAEI+A+R + Sbjct: 4 DVFMRAALDQAALAKEAGEVPVGAVVVLEGRVIASGFNCPISRHDPTAHAEIMALRNAAK 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 I LP +LYVTLEPC+MCA A+ AR++R+ +GA +PK G + + +H Sbjct: 64 ICGNYRLPACELYVTLEPCSMCAGAMIHARLKRVVFGAFDPKTGACGSVVDLFGQKELNH 123 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + G+ + +++ FF ERR Sbjct: 124 HTTVTSGVLQDECSLLLKMFFAERR 148 >gi|55823732|ref|YP_142173.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus thermophilus CNRZ1066] gi|55739717|gb|AAV63358.1| cytidine/deoxycytidylate deaminase family protein, putative [Streptococcus thermophilus CNRZ1066] Length = 172 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/144 (40%), Positives = 83/144 (57%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FMS AL+EAQ + + EIP+G V V + +I+ R N EL HAE++AI+ R Sbjct: 11 IFMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAEVMAIQEANRT 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L + L+VT+EPC MC+ AI LARI ++ YGA N K GG + +H Sbjct: 71 VGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDERLNHR 130 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ GI E +I+QDFF++ R Sbjct: 131 VEVETGIMEVDCAKIMQDFFRQSR 154 >gi|118444046|ref|YP_879269.1| cytidine/deoxycytidylate deaminase family protein, pytative [Clostridium novyi NT] gi|118134502|gb|ABK61546.1| cytidine/deoxycytidylate deaminase family protein, pytative [Clostridium novyi NT] Length = 147 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 62/146 (42%), Positives = 85/146 (58%), Gaps = 7/146 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ AAL++E+PVGAV V N ++I+ A N L D TAHAEILAI+ IL Sbjct: 5 FMEIALDEAKIAALKDEVPVGAVIVKNGEVIASAHNLRETLNDPTAHAEILAIKKASSIL 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK---GGGIENGTQFYTLATCH 123 L E ++YVTLEPC MC+ AI +RIR+LY G +P G + + Q L T Sbjct: 65 KNWRLNECEMYVTLEPCPMCSGAILQSRIRKLYIGTIDPSMGCCGSVVDLVQNRYLKTAL 124 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 ++ R I+ +FF+ +R Sbjct: 125 D----IKWFNDDRCSSILTNFFRSKR 146 >gi|116495716|ref|YP_807450.1| cytosine/adenosine deaminase [Lactobacillus casei ATCC 334] gi|116105866|gb|ABJ71008.1| tRNA-adenosine deaminase [Lactobacillus casei ATCC 334] Length = 168 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/144 (41%), Positives = 81/144 (56%), Gaps = 4/144 (2%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM AL EA+ AA E+P+GAV V +II R N +D T HAE+LAI+ C+ Sbjct: 7 NQFMDAALTEAKKAAAIGEVPIGAVIVHQGEIIGRGYNLRETTQDATYHAEMLAIQAACK 66 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC-- 122 L L + L+VTLEPC MCA A+ AR+ Y+GA++PK G GT + LA Sbjct: 67 TLGTWRLEDCSLFVTLEPCPMCAGAMINARVATCYFGATDPKAG--VAGTFYNLLADTRF 124 Query: 123 HHSPEIYPGISEQRSRQIIQDFFK 146 +H + GI S ++Q FF+ Sbjct: 125 NHQVAVVSGIKADESATLLQTFFR 148 >gi|119356459|ref|YP_911103.1| tRNA-adenosine deaminase [Chlorobium phaeobacteroides DSM 266] gi|119353808|gb|ABL64679.1| tRNA-adenosine deaminase [Chlorobium phaeobacteroides DSM 266] Length = 153 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 85/144 (59%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M+ A +EA A + E+PVGAV +N I+ + N+ EL D TAHAE++A+ Sbjct: 6 YMAIAFKEALKAVEKKEVPVGAVVFDSNGNIVGKGYNQVEELSDATAHAEMIALTSAMAT 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L+ + L + + VT+EPC MCA A+ A+I RL +GA +PK G +H+ Sbjct: 66 LNTKYLDDCTIAVTMEPCPMCAGALVNAKIGRLIFGAYDPKMGAAGTVLNITGCRELNHN 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE++ GI EQ+ ++QDFF+E R Sbjct: 126 PEVFGGIMEQQCSGLLQDFFRELR 149 >gi|260061052|ref|YP_003194132.1| putative cytosine/adenosine deaminase [Robiginitalea biformata HTCC2501] gi|88785184|gb|EAR16353.1| putative cytosine/adenosine deaminase [Robiginitalea biformata HTCC2501] Length = 149 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 83/143 (58%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ A E+PVGAV + +++I+RA N +L DVTAHAE+ AI L Sbjct: 10 FMRKALQEAEAAFDLGEVPVGAVITVRDRVIARAHNLTEKLNDVTAHAEMQAITAAANFL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC MCA A+ +++ R+ YGA +P+ G G + H Sbjct: 70 GGKYLTDCTLYVTLEPCQMCAGALYWSQVSRVVYGAPDPQRGFTAMGGKL------HPRT 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + PGI E + +++ FF ERR Sbjct: 124 LVTPGILEAEAAALLKRFFIERR 146 >gi|255659416|ref|ZP_05404825.1| tRNA-specific adenosine deaminase [Mitsuokella multacida DSM 20544] gi|260848379|gb|EEX68386.1| tRNA-specific adenosine deaminase [Mitsuokella multacida DSM 20544] Length = 169 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M++ +M ALEEAQ A E+P+GAV V ++++R N D TAHAE++AI Sbjct: 1 MQEDAYYMRLALEEAQKAYDLEEVPIGAVLVDREGEVVARGHNMREVWHDATAHAEMIAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R C + L + LYVT+EPC MCA AI ++R+ R+ YG+++ + G E+ Sbjct: 61 REACAKEGRWRLSGLTLYVTIEPCPMCAGAIVMSRVDRVVYGSTDARAGACESVFNIPGC 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ ++ I++ FFKERR Sbjct: 121 PALNHRPEMTAGVLQEECAGIMKRFFKERR 150 >gi|55821816|ref|YP_140258.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus thermophilus LMG 18311] gi|55737801|gb|AAV61443.1| cytidine/deoxycytidylate deaminase family protein, putative [Streptococcus thermophilus LMG 18311] Length = 172 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 83/144 (57%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FMS AL+EAQ + + EIP+G V V + +I+ R N EL HAE++AI+ R Sbjct: 11 IFMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAEVMAIQEANRT 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L + L+VT+EPC MC+ AI LARI ++ YGA N K GG + +H Sbjct: 71 VGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDDRLNHR 130 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E +I+QDFF++ R Sbjct: 131 VEVETGVMEADCAKIMQDFFRQSR 154 >gi|269302803|gb|ACZ32903.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila pneumoniae LPCoLN] Length = 155 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+K FM A +EA+ A ++E+PVG V V ++KII+RA N +LKD TAHAEIL I Sbjct: 1 MEKDIFFMQQAFKEARKAYDQDEVPVGCVIVKDDKIIARAHNSVEKLKDATAHAEILCIG 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + LY TLEPC MCA AI LARI R+ + A + + G + +T Sbjct: 61 SAAQDLDNWRLLDTVLYCTLEPCLMCAGAIQLARIPRIVWAAPDVRLGAGGSWVNIFTEK 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H+ G+ + + +++ FF E+R Sbjct: 121 HPFHTVSCTGGVCSEEAEHLMKKFFVEKR 149 >gi|332360091|gb|EGJ37905.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1056] Length = 156 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEAFMREALKEAEIALAYDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 66 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+QDFF++RR Sbjct: 126 RLNHRVEVETGVLQEECAQIMQDFFRQRR 154 >gi|317126762|ref|YP_004093044.1| CMP/dCMP deaminase zinc-binding protein [Bacillus cellulosilyticus DSM 2522] gi|315471710|gb|ADU28313.1| CMP/dCMP deaminase zinc-binding protein [Bacillus cellulosilyticus DSM 2522] Length = 161 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/148 (38%), Positives = 87/148 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K+ FM AL EA+ A E+P+GA+ V +N II+R N + + VT HAE++AI+ Sbjct: 7 KEDIFFMEQALVEAEKAMEIGEVPIGAIIVRDNVIIARGHNLREQQQMVTNHAELIAIQK 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C + L + LYVTLEPC MCA AI +R++R+ YGA++PK G + Sbjct: 67 ACEEVGSWRLEDCTLYVTLEPCPMCAGAIVQSRMKRVVYGAADPKAGCCGSLMNLLDEPR 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ S ++++DFFK+ R Sbjct: 127 LNHQVYVTSGLYEEESSRLLKDFFKKLR 154 >gi|116628523|ref|YP_821142.1| cytidine/deoxycytidylate deaminase family protein, putative [Streptococcus thermophilus LMD-9] gi|116101800|gb|ABJ66946.1| tRNA-adenosine deaminase [Streptococcus thermophilus LMD-9] Length = 172 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 83/144 (57%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FMS AL+EAQ + + EIP+G V V + +I+ R N EL HAE++AI+ R Sbjct: 11 IFMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAEVMAIQEANRT 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L + L+VT+EPC MC+ AI LARI ++ YGA N K GG + +H Sbjct: 71 VGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDERLNHR 130 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E +I+QDFF++ R Sbjct: 131 VEVETGVMEADCAKIMQDFFRQSR 154 >gi|297172082|gb|ADI23064.1| cytosine/adenosine deaminases [uncultured gamma proteobacterium HF0770_07M15] Length = 150 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/142 (39%), Positives = 80/142 (56%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ +A A +E+PVGAV V +I+RA N+ LKD TAHAE++A+ + Sbjct: 1 MQAAIRQAVKAYEEDEVPVGAVVVREGAVIARAWNQVELLKDATAHAEMIALTAAEAAVG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L LYVT EPC MCA A+ RI R+ +GA++P+GG T +H+ + Sbjct: 61 DWRLTGCTLYVTKEPCPMCAGALVHCRIDRVVFGATDPRGGAAGGAMNLLQFPTLNHACD 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I G+ E R ++Q FFKE+R Sbjct: 121 ITGGVMEPDCRNLLQTFFKEKR 142 >gi|262372477|ref|ZP_06065756.1| ComE operon protein 2 [Acinetobacter junii SH205] gi|262312502|gb|EEY93587.1| ComE operon protein 2 [Acinetobacter junii SH205] Length = 167 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/150 (40%), Positives = 83/150 (55%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + K +M A E+A AA + EIPVGAV V +KII N +L D TAHAEI A+R Sbjct: 3 VNKDEYWMQFAYEQAAIAASQGEIPVGAVIVSQDKIIGSGYNAPIQLSDPTAHAEIQALR 62 Query: 61 MGCRILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 CR + LP+ LYVTLEPCTMC A+ ARI+++ + + PK G + + Q Sbjct: 63 SACRAIENYRLPDDAVLYVTLEPCTMCVGALIHARIQKVIFATTEPKAGSVVSARQLLDN 122 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G +Q+ + DFFK+RR Sbjct: 123 GYYNHKFVFEQGCLQQQCSAQLSDFFKQRR 152 >gi|15618909|ref|NP_225195.1| cytosine deaminase [Chlamydophila pneumoniae CWL029] gi|16752024|ref|NP_445390.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila pneumoniae AR39] gi|4377331|gb|AAD19138.1| cytosine deaminase [Chlamydophila pneumoniae CWL029] gi|8163513|gb|AAF73712.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila pneumoniae AR39] Length = 155 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+K FM A +EA+ A ++E+PVG V V ++KII+RA N +LKD TAHAEIL I Sbjct: 1 MEKDIFFMQQAFKEARKAYDQDEVPVGCVIVKDDKIIARAHNSVEKLKDATAHAEILCIG 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + LY TLEPC MCA AI LARI R+ + A + + G + +T Sbjct: 61 SAAQDLDNWRLLDTVLYCTLEPCLMCAGAIQLARIPRIVWAAPDVRLGAGGSWVNIFTEE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H+ G+ + + +++ FF E+R Sbjct: 121 HPFHTVSCTGGVCSEEAEHLMKKFFVEKR 149 >gi|256820484|ref|YP_003141763.1| CMP/dCMP deaminase zinc-binding [Capnocytophaga ochracea DSM 7271] gi|256582067|gb|ACU93202.1| CMP/dCMP deaminase zinc-binding [Capnocytophaga ochracea DSM 7271] Length = 144 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 6/149 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM ALEEAQ A +EIPVGA+ ++N+II++A N L DVTAHAE+ AI Sbjct: 1 MNTDEYFMQKALEEAQLAFEEDEIPVGAIITIDNRIIAKAHNLTERLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M L + L +Y+TLEPC MCA A+ +++ RL Y A + G G + Sbjct: 61 MAAHYLGGKYLIGCTMYLTLEPCAMCAGALYWSQLSRLVYAAPDTHRGYSVMGGKL---- 116 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI Q + +++ FF+++R Sbjct: 117 --HPKTEVVTGILSQEATTLLKQFFQQKR 143 >gi|238926792|ref|ZP_04658552.1| deaminase [Selenomonas flueggei ATCC 43531] gi|238885324|gb|EEQ48962.1| deaminase [Selenomonas flueggei ATCC 43531] Length = 152 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 88/144 (61%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M ALEEA+ A L E+P+GAV +L++ +IS N D TAHAE++AIR C+ Sbjct: 8 MRLALEEAKRAYLCGEVPIGAV-ILDDAGSVISSGYNLRETEHDATAHAELIAIRRACKA 66 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L + LYVT+EPC MCA AI ++RI R+ YG+++ K G E+ + +H Sbjct: 67 LGRWRLTGLTLYVTIEPCPMCAGAIVMSRISRVVYGSADSKAGACESLFNITGCSGLNHQ 126 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P++ G+ + ++++FF+ERR Sbjct: 127 PDVCAGVLAEECAALLRNFFQERR 150 >gi|322374121|ref|ZP_08048655.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus sp. C150] gi|321277087|gb|EFX54158.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus sp. C150] Length = 172 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 85/145 (58%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FMS AL+EAQ + + EIP+G V V + +I+ R N EL HAE++AI+ R Sbjct: 10 DFFMSEALKEAQKSLDKAEIPIGCVIVKDGEIVGRGHNAREELNQAIMHAEVMAIQEANR 69 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L + L+VT+EPC MC+ AI LARI ++ YGASN K GG + +H Sbjct: 70 TIGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGASNQKFGGAGSLYDILRDERLNH 129 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E+ +I+Q+FF++ R Sbjct: 130 RVDLETGVMEKECAEIMQNFFRQSR 154 >gi|309805439|ref|ZP_07699486.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LactinV 09V1-c] gi|309810071|ref|ZP_07703917.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners SPIN 2503V10-D] gi|308165257|gb|EFO67493.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LactinV 09V1-c] gi|308169570|gb|EFO71617.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners SPIN 2503V10-D] Length = 158 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 82/143 (57%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A EA A + EIP+GAV V +I R NR +D T HAEI+AI+ C+ L Sbjct: 11 MKLAFLEADKAEQQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQEACKNL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L+VTLEPC MCA AI AR++ +YYGA +PK G + + +H P Sbjct: 71 NSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFTKFNHHP 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I+ G+ +++ Q ++ FFK R Sbjct: 131 QIFGGLYREQAAQQLKKFFKNIR 153 >gi|296436400|gb|ADH18574.1| cytosine deaminase [Chlamydia trachomatis G/9768] gi|296438259|gb|ADH20420.1| cytosine deaminase [Chlamydia trachomatis G/11074] gi|297140760|gb|ADH97518.1| cytosine deaminase [Chlamydia trachomatis G/9301] Length = 163 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM AL+EA+ A ++E+PVG + V +KII+R N +LKD TAHAE++ + Sbjct: 3 IEKDLFFMKKALDEARKAYEQDEVPVGCIIVHGDKIIARGHNSVEQLKDPTAHAEMICVS 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L + LY TLEPC MCA AI LARI R+ +GA + + G + + Sbjct: 63 AAAEYLENWRLKDTILYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEK 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E G+ Q S Q++++FF E+R Sbjct: 123 HPFHQVECCSGVCYQESEQLMKNFFLEKR 151 >gi|257866910|ref|ZP_05646563.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus EC30] gi|257872573|ref|ZP_05652226.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus EC10] gi|257800868|gb|EEV29896.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus EC30] gi|257806737|gb|EEV35559.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus EC10] Length = 168 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 55/140 (39%), Positives = 78/140 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA+ A E+P+GAV VL+ KII R N + AHAE+ AI CR + Sbjct: 15 FMEEAIKEARKAEGLAEVPIGAVVVLDGKIIGRGHNLRETQQQAAAHAEMFAIEEACRTV 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VTLEPC MC+ A+ LAR+ +Y+GA +PKGG +H Sbjct: 75 GSWRLEQAQLFVTLEPCPMCSGAMLLARVEEVYFGAYDPKGGTAGTLMNLLEDERFNHWS 134 Query: 127 EIYPGISEQRSRQIIQDFFK 146 + GI E+ Q++ DFF+ Sbjct: 135 YVEGGILEEACGQLLTDFFR 154 >gi|71066051|ref|YP_264778.1| tRNA-adenosine deaminase [Psychrobacter arcticus 273-4] gi|71039036|gb|AAZ19344.1| tRNA-adenosine deaminase [Psychrobacter arcticus 273-4] Length = 195 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 59/144 (40%), Positives = 84/144 (58%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ AL+ A+ A R E+PVGAV V N +II + N D TAHAEI+A+R C L Sbjct: 41 WMTEALKLAKQGAEREEVPVGAVLVHNQQIIGQGFNEPIGRCDATAHAEIVALREACAHL 100 Query: 67 SQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 LP + LYVTLEPCTMC A+ AR+ RL Y + P+ G + + +H Sbjct: 101 KNYRLPLQTTLYVTLEPCTMCIGALIHARVDRLVYSTNEPRAGMVGSQMNLAAQPFYNHH 160 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + S Q+++DFF+ERR Sbjct: 161 MQVDTGLCREHSSQMLKDFFRERR 184 >gi|254448832|ref|ZP_05062288.1| zinc-binding domain protein [gamma proteobacterium HTCC5015] gi|198261522|gb|EDY85811.1| zinc-binding domain protein [gamma proteobacterium HTCC5015] Length = 163 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/147 (40%), Positives = 83/147 (56%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M ALE+A+ AA E+PVGAV V +++I+ A NR D TAHAEI +R Sbjct: 8 RDECYMQLALEQAELAAQVGEVPVGAVLVQGDEVIASAFNRPIAEHDPTAHAEIQVLRQA 67 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L + LYVTLEPC MC AI ARI RL Y A+ PK G +++ Sbjct: 68 GQSQQNYRLCDTTLYVTLEPCVMCVGAILHARIGRLVYAAAEPKMGAVDSAFSLLRDERH 127 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ E SR++IQ FF++RR Sbjct: 128 FHRMQVASGVLEAPSRELIQSFFRQRR 154 >gi|296332941|ref|ZP_06875399.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305672716|ref|YP_003864387.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp. spizizenii str. W23] gi|296149905|gb|EFG90796.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305410959|gb|ADM36077.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp. spizizenii str. W23] Length = 161 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + ++M A++EA+ A + E+P+GAV V+N++II+RA N + AHAE+L I Sbjct: 1 MTQDELYMKEAIKEAKKAEEKGEVPIGAVLVVNDEIIARAHNLRETEQRSIAHAEMLVID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG Sbjct: 61 EACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGAFDPKGGCSGTIMNLLQEE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ FF+E R Sbjct: 121 RFNHQAEVVSGVLEEECGGMLSSFFRELR 149 >gi|327472530|gb|EGF17961.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK408] Length = 156 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGASN K G + T Sbjct: 66 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGASNQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+Q+FF++RR Sbjct: 126 RLNHRVEVETGVLQEECAQIMQEFFRQRR 154 >gi|160936895|ref|ZP_02084259.1| hypothetical protein CLOBOL_01784 [Clostridium bolteae ATCC BAA-613] gi|158440085|gb|EDP17832.1| hypothetical protein CLOBOL_01784 [Clostridium bolteae ATCC BAA-613] Length = 244 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/148 (39%), Positives = 83/148 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +K FM AL +AQ AA ++P+G V V +KII+R NR K V +HAEI++I+ Sbjct: 93 QKDEGFMREALRQAQKAAAIGDVPIGCVIVRGDKIIARGYNRRNADKSVLSHAEIISIKK 152 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C+ + L + +YVTLEPC MCA AI ARI R+ G NPK G + + Sbjct: 153 ACKKIGDWRLEDCTMYVTLEPCPMCAGAIVQARIPRIAVGCMNPKAGCAGSVLDMLHVPG 212 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ EQ +++ DFF+ R Sbjct: 213 FNHQAEVTEGVLEQECSKLMSDFFQSLR 240 >gi|332358122|gb|EGJ35954.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK49] Length = 156 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 66 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+QDFF+ RR Sbjct: 126 RLNHRVEVETGVLQEECAQIMQDFFRNRR 154 >gi|239630121|ref|ZP_04673152.1| tRNA-adenosine deaminase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067271|ref|YP_003789294.1| cytosine/adenosine deaminase [Lactobacillus casei str. Zhang] gi|239527733|gb|EEQ66734.1| tRNA-adenosine deaminase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439678|gb|ADK19444.1| Cytosine/adenosine deaminase [Lactobacillus casei str. Zhang] Length = 168 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/144 (41%), Positives = 81/144 (56%), Gaps = 4/144 (2%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM AL EA+ AA E+P+GAV V +II R N +D T HAE+LAI+ C+ Sbjct: 7 NQFMDAALTEAKKAAAIGEVPIGAVIVHQGEIIGRGYNLRETTQDATHHAEMLAIQAACK 66 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC-- 122 L L + L+VTLEPC MCA A+ AR+ Y+GA++PK G GT + LA Sbjct: 67 TLGTWRLEDCSLFVTLEPCPMCAGAMINARVATCYFGATDPKAG--VAGTFYNLLADTRF 124 Query: 123 HHSPEIYPGISEQRSRQIIQDFFK 146 +H + GI S ++Q FF+ Sbjct: 125 NHQVVVVSGIKADESATLLQTFFR 148 >gi|256848137|ref|ZP_05553581.1| tRNA-adenosine deaminase [Lactobacillus coleohominis 101-4-CHN] gi|256715197|gb|EEU30174.1| tRNA-adenosine deaminase [Lactobacillus coleohominis 101-4-CHN] Length = 169 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA A L E+P+GAV V + +II N + + HAEILAI C L Sbjct: 12 FMRAAINEAHQAELLGEVPIGAVIVKDGQIIGAGHNMREKYQQSIYHAEILAIMEACDAL 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + DLYVTLEPC MC+ AI +R+R++YY A +PK G + + + +H Sbjct: 72 HSWRLEDCDLYVTLEPCIMCSGAIIHSRLRQVYYAAPDPKAGAVNSLYTLLNDSRLNHQV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + Q+++ FF+E R Sbjct: 132 TVHQGLLQDECSQMLKHFFREIR 154 >gi|331701735|ref|YP_004398694.1| CMP/dCMP deaminase zinc-binding protein [Lactobacillus buchneri NRRL B-30929] gi|329129078|gb|AEB73631.1| CMP/dCMP deaminase zinc-binding protein [Lactobacillus buchneri NRRL B-30929] Length = 165 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/139 (41%), Positives = 78/139 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA A L E+P+GAV V + I+ R N L D TAHAEILAI+ CR L Sbjct: 8 FMKAALIEANKAYLIGEVPIGAVVVHDGTIVGRGHNLREHLNDGTAHAEILAIQEACRTL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + DLYVT+EPC MCA AI +RI + +G+ +PK G + + +H Sbjct: 68 RSWRLIDCDLYVTIEPCLMCAGAIINSRIENVCFGSRDPKAGATRSLYAVLEDSRLNHQV 127 Query: 127 EIYPGISEQRSRQIIQDFF 145 + G+ + +I++DFF Sbjct: 128 NVVEGLYADAASRIMKDFF 146 >gi|194333451|ref|YP_002015311.1| CMP/dCMP deaminase [Prosthecochloris aestuarii DSM 271] gi|194311269|gb|ACF45664.1| CMP/dCMP deaminase zinc-binding [Prosthecochloris aestuarii DSM 271] Length = 154 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/144 (41%), Positives = 79/144 (54%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A EA A + EIPVGAV N I+ R N+ L D TAHAEI+A+ Sbjct: 6 FMEQAFREAIKAYEKKEIPVGAVVFDSNGSIVGRGYNQVEALSDATAHAEIIALTSAMAT 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L + L VTLEPC MCA AI A++ RL +GA +PK G +H Sbjct: 66 LGSKYLSDCTLAVTLEPCPMCAGAIVNAKVGRLIFGAYDPKMGACGTVMNITGNRQLNHQ 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+Y GI E +++ ++QDFF+ R Sbjct: 126 PEVYGGILEHKAQSLLQDFFRGLR 149 >gi|104774442|ref|YP_619422.1| cytosine/adenosine deaminase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514541|ref|YP_813447.1| cytosine/adenosine deaminase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103423523|emb|CAI98425.1| Cytosine/adenosine deaminase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093856|gb|ABJ59009.1| tRNA-adenosine deaminase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126252|gb|ADY85582.1| Cytidine-deoxycytidylate deaminase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 169 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 52/130 (40%), Positives = 84/130 (64%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 ++E+P+GAV V + +II R NR +D TAHAEILAI+ C+ L L + +L+VT Sbjct: 24 QDEVPIGAVVVGPDGQIIGRGYNRRELDEDGTAHAEILAIKEACQKLDSWRLIDCNLFVT 83 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA AI +RI+ +Y+ A +PK G + +++ +H P++ G+ +++ Q Sbjct: 84 LEPCAMCAGAIINSRIKEVYFAAMDPKAGAAGSVVDLFSVEKFNHHPKVIRGLYKEQGAQ 143 Query: 140 IIQDFFKERR 149 +++DFF+E R Sbjct: 144 LLKDFFREIR 153 >gi|255693703|ref|ZP_05417378.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides finegoldii DSM 17565] gi|260620520|gb|EEX43391.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides finegoldii DSM 17565] Length = 145 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 81/149 (54%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM AL EA AA R E+PVGAV V +II+RA N L DVTAHAE+ AI Sbjct: 1 MLDDTYFMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y ++ Sbjct: 61 AAANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEK-----RGYQKYAVS 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ ++++FF +R Sbjct: 116 ALHPKTVVVKGLLADECAALMKNFFAAKR 144 >gi|327459989|gb|EGF06328.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1] Length = 156 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 66 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGAANQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+QDFF+ RR Sbjct: 126 RLNHRVEVETGVLQEECAQIMQDFFRNRR 154 >gi|264677875|ref|YP_003277782.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] gi|262208388|gb|ACY32486.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] Length = 457 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 55/143 (38%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+A+ AA E+PVGAV V + ++I R N +D TAHAE+LA+R R L Sbjct: 11 FMRQALEQARRAAACGEVPVGAVVVKDGQVIGRGHNSPLSAQDPTAHAEVLALREAARTL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMC+ A+ AR+ + YGA+ P+ G + + +H Sbjct: 71 GNYRLEGCTLYVTLEPCTMCSGAMLHARVDAVVYGAAEPRTGAAGSVLDVFGYPAINHQT 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + ++ +FF++RR Sbjct: 131 RVLRGVLAAQCSALMAEFFQQRR 153 >gi|196251180|ref|ZP_03149855.1| CMP/dCMP deaminase zinc-binding [Geobacillus sp. G11MC16] gi|196209306|gb|EDY04090.1| CMP/dCMP deaminase zinc-binding [Geobacillus sp. G11MC16] Length = 169 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+EEA+ A E+P+GAV V + ++I+RA N + AHAEILAI Sbjct: 10 MNNDEYYMRLAIEEAKKAEQIGEVPIGAVIVQDGRVIARAHNLRETEQRAIAHAEILAID 69 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L LYVTLEPC MCA AI L+RI R+ +GAS+PKGG + Sbjct: 70 EACQATGSWRLERATLYVTLEPCAMCAGAIVLSRIERVVFGASDPKGGCAGTLMNLLQES 129 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ ++ DFF+ R Sbjct: 130 RFNHQADVTSGVLASECGSLLSDFFRRLR 158 >gi|332365640|gb|EGJ43399.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK355] Length = 156 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI R Sbjct: 12 FMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIEEANRHE 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T +H Sbjct: 72 NSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDERLNHRV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ ++ QI+QDFF+ RR Sbjct: 132 EVETGVLQEECAQIMQDFFRNRR 154 >gi|262278921|ref|ZP_06056706.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262259272|gb|EEY78005.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 167 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/144 (42%), Positives = 80/144 (55%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A E+A+ AA + EIPVGAV V N++I N L D TAHAEI AIR C L Sbjct: 9 WMQLAYEQAELAAQQGEIPVGAVVVSQNRVIGSGYNAPISLLDPTAHAEIQAIRAACLSL 68 Query: 67 SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 LPE LYVTLEPCTMC A+ ARI+ + +G + PK G + + Q +H Sbjct: 69 ENYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSTRQLLQHGYYNHR 128 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 G +++ Q + FFK+RR Sbjct: 129 FTFEHGCLQEKCAQQLSHFFKQRR 152 >gi|242372784|ref|ZP_04818358.1| deaminase [Staphylococcus epidermidis M23864:W1] gi|242349557|gb|EES41158.1| deaminase [Staphylococcus epidermidis M23864:W1] Length = 168 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ N +M A++EA+ A E+P+GAV V +N +I+RA N L+ TAHAE +AI Sbjct: 1 MRTDNDYMRLAIKEARKAQELGEVPIGAVIVKDNHVIARAHNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L + LYVTLEPC MCA AI ++RI R+ YGA +PKGG + Sbjct: 61 RASEVIGSWRLEDCTLYVTLEPCVMCAGAIVMSRIPRVVYGAIDPKGGCTGSLMNLLAQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E ++++FFK R Sbjct: 121 QFNHRAIVESGILENECSTLLREFFKNIR 149 >gi|183599769|ref|ZP_02961262.1| hypothetical protein PROSTU_03276 [Providencia stuartii ATCC 25827] gi|188022032|gb|EDU60072.1| hypothetical protein PROSTU_03276 [Providencia stuartii ATCC 25827] Length = 178 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALE A+NA EIPVGA+ V +N++I+ NR+ E D TAHAEI+ ++ G R L Sbjct: 10 WMKRALELAKNAQDAGEIPVGALLVKDNQLIASGWNRSIESHDPTAHAEIMVLQQGGRAL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S L + LYVTLEPC MCA A+ +RI RL YGA + K G + +H Sbjct: 70 SNYRLLDTTLYVTLEPCIMCAGALVHSRIGRLVYGARDFKTGACGSFINILERPGLNHYV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E+ ++ +FFK RR Sbjct: 130 DVKGGVLEETCSAMLSNFFKMRR 152 >gi|138893694|ref|YP_001124147.1| cytosine deaminase [Geobacillus thermodenitrificans NG80-2] gi|134265207|gb|ABO65402.1| Cytosine deaminase [Geobacillus thermodenitrificans NG80-2] Length = 161 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+EEA+ A E+P+GAV V + ++I+RA N + AHAEILAI Sbjct: 2 MNNDEYYMRLAIEEAKKAEQIGEVPIGAVIVQDGRVIARAHNLRETEQRAIAHAEILAIA 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L LYVTLEPC MCA AI L+RI R+ +GAS+PKGG + Sbjct: 62 EACQATGSWRLERATLYVTLEPCAMCAGAIVLSRIERVVFGASDPKGGCAGTLMNLLQES 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ ++ DFF+ R Sbjct: 122 RFNHQADVTSGVLASECGSLLSDFFRRLR 150 >gi|186684043|ref|YP_001867239.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102] gi|186466495|gb|ACC82296.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102] Length = 161 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/144 (42%), Positives = 81/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +MSCALE A+ A E+PVGAV + + K++++ NR KD TAHAEILA++ Sbjct: 14 WMSCALELAKVAGDAGEVPVGAVIIDSTGKLLAQGENRKERDKDPTAHAEILALKTAATT 73 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L E LYVTLEPC MCA AI AR+ +L YG + K G I A +H Sbjct: 74 LQNWHLNECTLYVTLEPCPMCAGAILQARVGQLVYGVDDTKTGAIRTVINIPDSAASNHG 133 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 ++ GI E R+ +Q +F RR Sbjct: 134 LQVIGGILESACREQLQAWFATRR 157 >gi|59711257|ref|YP_204033.1| tRNA-specific adenosine deaminase [Vibrio fischeri ES114] gi|59479358|gb|AAW85145.1| tRNA-specific adenosine deaminase [Vibrio fischeri ES114] Length = 171 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/144 (40%), Positives = 82/144 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + +M A+E A A E+PVGAV VL+++II NR+ D TAHAE++AI+ Sbjct: 8 RDASFYMQRAMELAAIAEQEGEVPVGAVIVLDDEIIGEGWNRSISTHDATAHAEMMAIKQ 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L + LYVTLEPC MCA AI +RI+R+ +GAS+ K G + +T AT Sbjct: 68 AGSKIENYRLVDATLYVTLEPCPMCAGAIVHSRIKRVIFGASDMKTGASGSVINLFTSAT 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 H E G+ E+ R +Q FF Sbjct: 128 AFHFVECESGVMEEACRSQLQAFF 151 >gi|171911154|ref|ZP_02926624.1| cytidine/deoxycytidylate deaminase family protein [Verrucomicrobium spinosum DSM 4136] Length = 176 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL +A+ AA ++E+P+GAV V ++II+RA N+ LKD TAHAE++A+ L Sbjct: 16 YMREALRQARKAARQDEVPIGAVIVHGSQIIARAWNQVETLKDATAHAEMIALTQAQGAL 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E DLYVT EPC MCA AI R+RR+ +G + KGG +H Sbjct: 76 GDWRLNECDLYVTKEPCPMCAGAIMHCRVRRVIFGCPDLKGGAAGGYWNLLQSPNLNHRS 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + ++++ FF+E R Sbjct: 136 EITAGVLGEECVEVLKSFFREAR 158 >gi|282918346|ref|ZP_06326083.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus C427] gi|282317480|gb|EFB47852.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus C427] Length = 156 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A+EEA+ AA E+P+GA+ ++++I+RA N L+ TAHAE +AI ++L Sbjct: 7 FMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARANNLRETLQQPTAHAEHIAIERAAKVL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I ++RI R+ YGA +PKGG + + +H Sbjct: 67 GSWRLEDCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRA 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ ++ FFK R Sbjct: 127 IVDKGVLKEACSTLLTTFFKNLR 149 >gi|162147097|ref|YP_001601558.1| cytidine deaminase protein [Gluconacetobacter diazotrophicus PAl 5] gi|161785674|emb|CAP55245.1| putative cytidine deaminase protein [Gluconacetobacter diazotrophicus PAl 5] Length = 193 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV + + I++RAGN+ D AHAE+L +R RIL L L VTL Sbjct: 44 GEVPVGAVLLGPDGTILARAGNQVEAGHDAAAHAEMLVMRAAARILGSPRLTGCTLVVTL 103 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCAAA R+ R+ +GA +PKGGG+E+G + C H PE G+ E+ + + Sbjct: 104 EPCPMCAAASVHFRVGRIVFGAYDPKGGGVEHGPRLLARPDCLHRPEWVGGVREREAAAL 163 Query: 141 IQDFFKERR 149 ++DFF R Sbjct: 164 LRDFFAALR 172 >gi|313896633|ref|ZP_07830182.1| cytidine and deoxycytidylate deaminase zinc-binding region [Selenomonas sp. oral taxon 137 str. F0430] gi|320529093|ref|ZP_08030185.1| cytidine and deoxycytidylate deaminase zinc-binding region [Selenomonas artemidis F0399] gi|312974818|gb|EFR40284.1| cytidine and deoxycytidylate deaminase zinc-binding region [Selenomonas sp. oral taxon 137 str. F0430] gi|320138723|gb|EFW30613.1| cytidine and deoxycytidylate deaminase zinc-binding region [Selenomonas artemidis F0399] Length = 156 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 80/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA+ A E+P+GAV + I+S N D TAHAE++AIR CR L Sbjct: 8 MRLALAEAERAYALGEVPIGAVVMDGAGNIVSTGHNLRESEHDATAHAELIAIRRACRAL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVT+EPC MCA AI ++RI R+ YGA++ K G E+ T +H P Sbjct: 68 GRWRLTGMTLYVTIEPCPMCAGAIVMSRISRVVYGAADSKAGACESLFNIPGCMTLNHRP 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y + I++ FF ERR Sbjct: 128 EVYGQVMADECHAIMRRFFNERR 150 >gi|237714907|ref|ZP_04545388.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262406825|ref|ZP_06083374.1| ComE operon protein 2 [Bacteroides sp. 2_1_22] gi|298483658|ref|ZP_07001833.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. D22] gi|229445232|gb|EEO51023.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355528|gb|EEZ04619.1| ComE operon protein 2 [Bacteroides sp. 2_1_22] gi|295084706|emb|CBK66229.1| Cytosine/adenosine deaminases [Bacteroides xylanisolvens XB1A] gi|298270228|gb|EFI11814.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. D22] Length = 145 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 79/143 (55%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA AA R E+PVGAV V +II+RA N L DVTAHAE+ AI +L Sbjct: 7 FMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAITAAANVL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y + H Sbjct: 67 GGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEK-----RGYQKYAGSALHPKT 121 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI ++++FF +R Sbjct: 122 VVVKGIMADECAALMKEFFAAKR 144 >gi|323350632|ref|ZP_08086294.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis VMC66] gi|322123314|gb|EFX94999.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis VMC66] Length = 156 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI R Sbjct: 12 FMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIEEANRHE 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T +H Sbjct: 72 NSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDERLNHRV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ ++ QI+QDFF+ RR Sbjct: 132 EVETGVLQEDCAQIMQDFFRNRR 154 >gi|282852744|ref|ZP_06262086.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus gasseri 224-1] gi|282556486|gb|EFB62106.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus gasseri 224-1] Length = 150 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 86/143 (60%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRIL 66 M A +A+ A + E+P+GA+ V + + G REL +D T HAE++AIR C+ L Sbjct: 1 MQLAFAQAKKAEDQGEVPIGAIVVDKDGNVIGEGYNRRELDEDATQHAEMIAIRQACQNL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L++TLEPC MC+ AI +R+ +YYGA +PK G + + + +H P Sbjct: 61 GSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAAGSVIDLFKVEKFNHHP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +++ G+ + ++ Q+++DFF+E R Sbjct: 121 KVFGGLFKDQAAQMLKDFFREIR 143 >gi|284040230|ref|YP_003390160.1| CMP/dCMP deaminase zinc-binding protein [Spirosoma linguale DSM 74] gi|283819523|gb|ADB41361.1| CMP/dCMP deaminase zinc-binding protein [Spirosoma linguale DSM 74] Length = 144 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/145 (40%), Positives = 83/145 (57%), Gaps = 5/145 (3%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL A+ AA EIPVGA+ V N+II++A N+ +LKDVTAHAEI+AI + Sbjct: 4 DYFMEIALTLAEEAADNGEIPVGAIVVCRNRIIAKARNQTEQLKDVTAHAEIMAITSATQ 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + LP+ +YVTLEPC MCA A+ A++ RL GA++ + G T H Sbjct: 64 YLGSKYLPDCTMYVTLEPCVMCAGALFWAQLGRLVIGAADARRGYSRVETNLL-----HP 118 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + G+ + S+ ++ FF R Sbjct: 119 KTRVETGVLAEESQALLAKFFTRLR 143 >gi|171058718|ref|YP_001791067.1| CMP/dCMP deaminase zinc-binding [Leptothrix cholodnii SP-6] gi|170776163|gb|ACB34302.1| CMP/dCMP deaminase zinc-binding [Leptothrix cholodnii SP-6] Length = 231 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 56/146 (38%), Positives = 86/146 (58%), Gaps = 4/146 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNN----KIISRAGNRNRELKDVTAHAEILAIRMGC 63 M AL++A NA L E+PVGAV V + ++I+ NR D TAHAE++A+R Sbjct: 15 MRLALDQALNAHLAGEVPVGAVIVRHTADGPQVIATGYNRPVTTNDPTAHAELVALRHAA 74 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 +L LP+ ++Y+TLEPC MCA A+ AR+RR+ +GA +PK G + + L + Sbjct: 75 TLLENYRLPDCEIYITLEPCAMCAMALLHARLRRVVFGAWDPKTGAAGSVVNLFDLPQLN 134 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ +++++FF ERR Sbjct: 135 HQTEVQGGVLADSCGRVLREFFVERR 160 >gi|78186386|ref|YP_374429.1| cytosine deaminase, putative [Chlorobium luteolum DSM 273] gi|78166288|gb|ABB23386.1| tRNA-adenosine deaminase [Chlorobium luteolum DSM 273] Length = 153 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 82/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A EA+ A E+PVGAV + ++ ++ R N+ L D TAHAEI+A+ Sbjct: 6 FMELAFREARKAFEAGEVPVGAVVLDASSHVVGRGYNQVETLSDATAHAEIIALTAAMAT 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L + L VTLEPC MCA AI A++ R+ +GA +PK G + +H Sbjct: 66 LGNKYLNDCTLVVTLEPCPMCAGAIVNAKVGRVVFGAYDPKMGAAGSVLNVTGCRALNHQ 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE++ GI E R++ ++QDFF E R Sbjct: 126 PEVFGGIMEARAQGLLQDFFAELR 149 >gi|305665590|ref|YP_003861877.1| putative cytosine/adenosine deaminase [Maribacter sp. HTCC2170] gi|88710346|gb|EAR02578.1| putative cytosine/adenosine deaminase [Maribacter sp. HTCC2170] Length = 149 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 86/143 (60%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ A + E+P+GA+ V++++II+RA N +L DVTAHAE+ AI L Sbjct: 10 FMKKALQEAEAAYEKGEVPIGAIIVIDDRIIARAHNLTEQLNDVTAHAEMQAITAAANFL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +YVTLEPC MCA A+ ++I ++ +GA + + G GT+ H Sbjct: 70 GGKYLQNCTMYVTLEPCQMCAGALYWSQISKIVFGAKDTERGCGAMGTKL------HPKT 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ E + ++++ FF ERR Sbjct: 124 KITGGVMENEASELLKRFFIERR 146 >gi|154494050|ref|ZP_02033370.1| hypothetical protein PARMER_03395 [Parabacteroides merdae ATCC 43184] gi|154086310|gb|EDN85355.1| hypothetical protein PARMER_03395 [Parabacteroides merdae ATCC 43184] Length = 147 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 82/143 (57%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA +AA E+PVGAV V NN+II+RA N+ L D TAHAE+LAI +L Sbjct: 10 FMKQALVEACSAAEEGEVPVGAVIVCNNQIIARAHNQTERLNDPTAHAEMLAITAAVGVL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVT+EPC MCA AI +++ ++ YGA++ K G Q Y H Sbjct: 70 GAKYLTGCSLYVTVEPCVMCAGAIGWSQLSKIVYGATDEK-----RGFQQYAPKALHPKA 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E + ++ FF+ +R Sbjct: 125 TVKKGVLENECAEEMRKFFQRKR 147 >gi|325685703|gb|EGD27782.1| cytidine/deoxycytidylate deaminase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 169 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 52/130 (40%), Positives = 83/130 (63%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 ++E+P+GAV V + +II R NR +D TAHAEILAI+ C+ L L + L+VT Sbjct: 24 QDEVPIGAVVVGPDGQIIGRGYNRRELDEDGTAHAEILAIKEACQKLDSWRLIDCSLFVT 83 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA AI +RI+ +Y+ A +PK G + +++ +H P++ G+ +++ Q Sbjct: 84 LEPCAMCAGAIINSRIKEVYFAAMDPKAGAAGSVVDLFSVEKFNHHPKVIRGLYKEQGAQ 143 Query: 140 IIQDFFKERR 149 +++DFF+E R Sbjct: 144 LLKDFFREIR 153 >gi|209544158|ref|YP_002276387.1| CMP/dCMP deaminase [Gluconacetobacter diazotrophicus PAl 5] gi|209531835|gb|ACI51772.1| CMP/dCMP deaminase zinc-binding [Gluconacetobacter diazotrophicus PAl 5] Length = 178 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV + + I++RAGN+ D AHAE+L +R RIL L L VTL Sbjct: 29 GEVPVGAVLLGPDGTILARAGNQVEAGHDAAAHAEMLVMRAAARILGSPRLTGCTLVVTL 88 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCAAA R+ R+ +GA +PKGGG+E+G + C H PE G+ E+ + + Sbjct: 89 EPCPMCAAASVHFRVGRIVFGAYDPKGGGVEHGPRLLARPDCLHRPEWVGGVREREAAAL 148 Query: 141 IQDFFKERR 149 ++DFF R Sbjct: 149 LRDFFAALR 157 >gi|270294540|ref|ZP_06200742.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270276007|gb|EFA21867.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 144 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 59/145 (40%), Positives = 80/145 (55%), Gaps = 5/145 (3%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + +M AL EA A R E+PVGAV V ++II+RA N L DVTAHAE+ AI Sbjct: 4 SYYMKQALLEAHKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAAAA 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + L E LYVT+EPC MCA AI+ A++ RL +GA + K G Q Y H Sbjct: 64 TLGGKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAEDEK-----RGYQRYASQALHP 118 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ GI ++++FF +R Sbjct: 119 KTQVVKGILADECAALMKEFFAAKR 143 >gi|317481165|ref|ZP_07940240.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides sp. 4_1_36] gi|316902661|gb|EFV24540.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides sp. 4_1_36] Length = 146 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 59/145 (40%), Positives = 80/145 (55%), Gaps = 5/145 (3%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + +M AL EA A R E+PVGAV V ++II+RA N L DVTAHAE+ AI Sbjct: 6 SYYMKQALLEAHKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAAAA 65 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + L E LYVT+EPC MCA AI+ A++ RL +GA + K G Q Y H Sbjct: 66 TLGGKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAEDEK-----RGYQRYASQALHP 120 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ GI ++++FF +R Sbjct: 121 KTQVVKGILADECAALMKEFFAAKR 145 >gi|116493223|ref|YP_804958.1| tRNA-adenosine deaminase [Pediococcus pentosaceus ATCC 25745] gi|116103373|gb|ABJ68516.1| tRNA-adenosine deaminase [Pediococcus pentosaceus ATCC 25745] Length = 161 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 52/145 (35%), Positives = 84/145 (57%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N +M+ A++EAQ A + +E+P+GAV V + KII R N +D T HAE+LAI C Sbjct: 10 NFYMNEAIKEAQFAKMIDEVPIGAVVVHDGKIIGRGHNLREHSQDSTTHAEVLAITEACA 69 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + L+VT+EPC MC+ I +++ ++++GA +PK G + + +H Sbjct: 70 YLKSWRLWDCQLFVTIEPCLMCSGTIINSQLPQVFFGARDPKAGAVRSLYTVLEDTRLNH 129 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ GI R+ +++ FFKE R Sbjct: 130 QVTVHEGIEADRASMLMKTFFKEIR 154 >gi|322434989|ref|YP_004217201.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp. MP5ACTX9] gi|321162716|gb|ADW68421.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp. MP5ACTX9] Length = 292 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/126 (46%), Positives = 74/126 (58%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV VLNN+II+R NR D TAHAEI+A+R RIL L DLY TLEPC Sbjct: 24 VPVGAVLVLNNEIIARGRNRVILDSDPTAHAEIVALREAGRILGNYRLENCDLYTTLEPC 83 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARIRRL Y A++PK G + +H E+ G+ + +++ Sbjct: 84 AMCAGAILHARIRRLIYAAADPKAGACGSALDVMNHPRLNHRMEVAVGLLAEECGEMLTS 143 Query: 144 FFKERR 149 FF+ RR Sbjct: 144 FFRTRR 149 >gi|315641449|ref|ZP_07896521.1| tRNA-specific adenosine deaminase [Enterococcus italicus DSM 15952] gi|315482737|gb|EFU73261.1| tRNA-specific adenosine deaminase [Enterococcus italicus DSM 15952] Length = 186 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA+ A E+P+GAV VL +II R N +D T HAE++AIR C + Sbjct: 30 FMCAAIGEAKKAQAIAEVPIGAVVVLEGEIIGRGHNLRETTQDATMHAEMIAIREACAKV 89 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VTLEPC MC A L+R+ +Y+GA +PKGG + T +H Sbjct: 90 GSWRLEDSQLFVTLEPCPMCGGAAMLSRVEEIYFGAYDPKGGATGSLLNLATDERFNHWS 149 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI + +++ FFKE R Sbjct: 150 YVEAGILQAECSDLLRTFFKELR 172 >gi|152978402|ref|YP_001344031.1| CMP/dCMP deaminase zinc-binding [Actinobacillus succinogenes 130Z] gi|150840125|gb|ABR74096.1| CMP/dCMP deaminase zinc-binding [Actinobacillus succinogenes 130Z] Length = 182 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 62/144 (43%), Positives = 85/144 (59%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ AL A A + EIPVGAV V +N+II N + D TAHAEI+A+R G + Sbjct: 16 FMNHALALADKARMLGEIPVGAVLVDEHNQIIGEGWNLSIIHSDPTAHAEIVALRRGAQK 75 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L LYVTLEPCTMCA AI +RI+RL +GA++ K G + + F+ +H Sbjct: 76 IQNYRLLNCTLYVTLEPCTMCAGAILHSRIKRLVFGAADEKTGAVGSRFHFFEDYKMNHV 135 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ ++ Q + DFFK RR Sbjct: 136 IEVTGGVLAEKCGQKLSDFFKMRR 159 >gi|15605579|ref|NP_220365.1| cytosine deaminase [Chlamydia trachomatis D/UW-3/CX] gi|3329316|gb|AAC68441.1| cytosine deaminase [Chlamydia trachomatis D/UW-3/CX] gi|297748972|gb|ADI51518.1| tRNA-specific adenosine deaminase [Chlamydia trachomatis D-EC] gi|297749852|gb|ADI52530.1| tRNA-specific adenosine deaminase [Chlamydia trachomatis D-LC] Length = 163 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM AL+EA+ A ++E+PVG + V +KII+R N +LKD T HAE++ I Sbjct: 3 IEKDLFFMKKALDEARKAYEQDEVPVGCIIVHGDKIIARGHNSVEQLKDPTVHAEMICIS 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L + LY TLEPC MCA AI LARI R+ +GA + + G + + Sbjct: 63 AAAEYLENWRLKDTILYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEK 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E G+ Q S Q++++FF E+R Sbjct: 123 HPFHQVECCSGVCYQESEQLMKNFFLEKR 151 >gi|326693434|ref|ZP_08230439.1| hypothetical protein LargK3_06881 [Leuconostoc argentinum KCTC 3773] Length = 169 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/145 (40%), Positives = 80/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL EA+ AA E+P+GAV V +N+I++RA N + TAHAE+LAI Sbjct: 13 DYFMQVALNEAKLAATEGEVPIGAVIVKDNQIVARAHNHREAHQLATAHAELLAIEAAND 72 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L L+VTLEPC MCA AI AR+ +YYGA + KGG + Q +H Sbjct: 73 ALQSWRLENTALFVTLEPCIMCAGAIINARVPVVYYGADDAKGGATRSLYQLLEDERLNH 132 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++P + ++QDFF + R Sbjct: 133 RVVVHPQVRGDEGGALLQDFFGQIR 157 >gi|37527198|ref|NP_930542.1| tRNA-specific adenosine deaminase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36786632|emb|CAE15694.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 173 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+E A A + EIPVGA+ V +NKIIS N++ D TAHAEI+ +R G L Sbjct: 10 WMQQAIERAIKAWEQGEIPVGAILVADNKIISEGWNQSIIAHDPTAHAEIIVLRKGGERL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMCA A+ +RI+RL YGAS+ K G + + +H Sbjct: 70 RNYRLINTTLYVTLEPCTMCAGAMIHSRIQRLVYGASDMKTGAVGSLVDILRHPGMNHQI 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ + ++ FFK+RR Sbjct: 130 DITSGVLAEECSTMLSAFFKQRR 152 >gi|309803507|ref|ZP_07697600.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LactinV 11V1-d] gi|308164391|gb|EFO66645.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LactinV 11V1-d] Length = 158 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 82/143 (57%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A EA A + EIP+GAV V +I R NR +D T HAEI+AI+ C+ L Sbjct: 11 MKLAFLEADKAEKQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQEACKNL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L+VTLEPC MCA AI AR++ +YYGA +PK G + + +H P Sbjct: 71 NSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFTKFNHHP 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I+ G+ +++ Q ++ FFK R Sbjct: 131 QIFGGLYREQAAQQLKIFFKNIR 153 >gi|160885114|ref|ZP_02066117.1| hypothetical protein BACOVA_03112 [Bacteroides ovatus ATCC 8483] gi|237718265|ref|ZP_04548746.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|260174220|ref|ZP_05760632.1| putative cytosine/adenosine deaminase [Bacteroides sp. D2] gi|293368778|ref|ZP_06615382.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides ovatus SD CMC 3f] gi|299147814|ref|ZP_07040877.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 3_1_23] gi|315922489|ref|ZP_07918729.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156109464|gb|EDO11209.1| hypothetical protein BACOVA_03112 [Bacteroides ovatus ATCC 8483] gi|229452449|gb|EEO58240.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|292636083|gb|EFF54571.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides ovatus SD CMC 3f] gi|298513997|gb|EFI37883.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 3_1_23] gi|313696364|gb|EFS33199.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 145 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 79/143 (55%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA AA R E+PVGAV V +II+RA N L DVTAHAE+ AI +L Sbjct: 7 FMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAITAAANVL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y + H Sbjct: 67 GGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEK-----RGYQKYAGSALHPKT 121 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++++FF +R Sbjct: 122 VVVKGVMADECATLMKEFFAAKR 144 >gi|307565958|ref|ZP_07628417.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella amnii CRIS 21A-A] gi|307345386|gb|EFN90764.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella amnii CRIS 21A-A] Length = 156 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 83/149 (55%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +KK +M ALEEA+ A EIP+GA+ V ++II+RA N L DVTAHAE+ AI Sbjct: 13 IKKDLYYMQFALEEAKQAYKEKEIPIGAIIVCKDRIIARAHNLTERLHDVTAHAEMQAIT 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + L LYVT+EPC MCA A+ ++++R+ +G + K G Y Sbjct: 73 IAANELGGKYLEGCTLYVTVEPCIMCAGALGWSQMKRIVFGCIDDK-----RGYHTYAPK 127 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H I GI E ++++ FFKERR Sbjct: 128 ALHPKANIIGGIMENECKELMLRFFKERR 156 >gi|329921024|ref|ZP_08277552.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners SPIN 1401G] gi|328935300|gb|EGG31780.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners SPIN 1401G] Length = 158 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 82/143 (57%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A EA A + EIP+GAV V +I R NR +D T HAEI+AI+ C+ L Sbjct: 11 MKLAFLEADKAEQQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQEACKNL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L+VTLEPC MCA AI AR++ +YYGA +PK G + + +H P Sbjct: 71 NSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFTKFNHHP 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I+ G+ +++ Q ++ FFK R Sbjct: 131 QIFGGLYREQAAQQLKIFFKNIR 153 >gi|332292166|ref|YP_004430775.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus 4H-3-7-5] gi|332170252|gb|AEE19507.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus 4H-3-7-5] Length = 149 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 82/143 (57%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EAQ A + EIPVGAV V++N II+RA N L DVTAHAE+ AI + Sbjct: 10 FMKKALQEAQAAFDQGEIPVGAVVVIDNMIIARAHNLTERLTDVTAHAEMQAITSASNFI 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC MCA A+ ++I R+ YGA + + G GT H Sbjct: 70 GGKYLQQCTLYVTLEPCQMCAGALYWSQIGRIVYGAKDLRRGYDVMGT------ILHPKT 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ Q I++ FF ++R Sbjct: 124 KVESGVLAQECESIMKRFFVDKR 146 >gi|171463305|ref|YP_001797418.1| CMP/dCMP deaminase zinc-binding [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192843|gb|ACB43804.1| CMP/dCMP deaminase zinc-binding [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 152 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+E+AQ AA E+PVGAV V + ++I++A N+ D +AHAE+LA+R Sbjct: 10 YMRMAIEQAQLAAQAGEVPVGAVLVKDGQVIAKAFNKPIANHDPSAHAEMLALREAALAQ 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 +P LYVTLEPC MC+ A+ ARI R+ +GA +PK G + + +H Sbjct: 70 ENYRIPGSTLYVTLEPCAMCSGAMLHARIDRVVFGAPDPKTGAAGSVLDLFASKQINHQT 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI + Q+++DFFK RR Sbjct: 130 SVEGGIMSEECGQLLRDFFKRRR 152 >gi|153808687|ref|ZP_01961355.1| hypothetical protein BACCAC_02986 [Bacteroides caccae ATCC 43185] gi|149128513|gb|EDM19731.1| hypothetical protein BACCAC_02986 [Bacteroides caccae ATCC 43185] Length = 145 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM AL EA AA R E+PVGAV V +II+RA N L DVTAHAE+ AI Sbjct: 1 MLDDTYFMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y Sbjct: 61 AAANVLGGKYLSECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEK-----RGYQRYAAD 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI ++++FF +R Sbjct: 116 ALHPKTVVVKGILADECAALMREFFAAKR 144 >gi|162446945|ref|YP_001620077.1| Zn dependent nucleoside deaminase [Acholeplasma laidlawii PG-8A] gi|161985052|gb|ABX80701.1| probable Zn dependent nucleoside deaminase [Acholeplasma laidlawii PG-8A] Length = 146 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 53/106 (50%), Positives = 71/106 (66%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ AL+EA+ A ++E+PVGAV VL+ KII+RA N + + AHAE LAI + + Sbjct: 9 FMNEALKEAKKANDKDEVPVGAVVVLDGKIIARAHNLRESRQSIHAHAEFLAIEKAAKKI 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 L D+YVTLEPC MCA A+ ARI+ LYYGA +PK G +E+ Sbjct: 69 GSWRLENADVYVTLEPCPMCAGAMIQARIKNLYYGAKDPKTGAVES 114 >gi|188584656|ref|YP_001916201.1| tRNA-adenosine deaminase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349343|gb|ACB83613.1| tRNA-adenosine deaminase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 158 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 85/143 (59%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+++A+ A + E+P+GAV V + ++I+ N+ +D T+HAEI+AI+ C L Sbjct: 11 WMQQAIDQAKLAYNKGEVPIGAVIVKDEQLIATGFNKRETSQDATSHAEIIAIQSACNYL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVT+EPC MCA AI +RI +L +G +PK G + +Q +H Sbjct: 71 GGWRLLDCTLYVTIEPCPMCAGAILQSRITKLVFGTEDPKAWGELSISQLLQNPQLNHQV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I GI ++ S+ II+ FF E R Sbjct: 131 DIVEGICKEESKDIIKQFFHELR 153 >gi|49482788|ref|YP_040012.1| deaminase [Staphylococcus aureus subsp. aureus MRSA252] gi|257424672|ref|ZP_05601099.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257427340|ref|ZP_05603739.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus 65-1322] gi|257429977|ref|ZP_05606361.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257432678|ref|ZP_05609038.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257435582|ref|ZP_05611630.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus M876] gi|282903146|ref|ZP_06311037.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus aureus subsp. aureus C160] gi|282904936|ref|ZP_06312794.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus Btn1260] gi|282907886|ref|ZP_06315721.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910199|ref|ZP_06318003.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus WBG10049] gi|282913391|ref|ZP_06321180.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus aureus subsp. aureus M899] gi|282923308|ref|ZP_06330988.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus C101] gi|283957356|ref|ZP_06374809.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus aureus subsp. aureus A017934/97] gi|293500437|ref|ZP_06666288.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus 58-424] gi|293509382|ref|ZP_06668093.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus M809] gi|293523969|ref|ZP_06670656.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus aureus subsp. aureus M1015] gi|295427097|ref|ZP_06819733.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590551|ref|ZP_06949190.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus MN8] gi|49240917|emb|CAG39584.1| putative deaminase [Staphylococcus aureus subsp. aureus MRSA252] gi|257272242|gb|EEV04365.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257275533|gb|EEV07006.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus 65-1322] gi|257279174|gb|EEV09775.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257282093|gb|EEV12228.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257284773|gb|EEV14892.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus M876] gi|282314176|gb|EFB44566.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus C101] gi|282322423|gb|EFB52745.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus aureus subsp. aureus M899] gi|282325591|gb|EFB55899.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus WBG10049] gi|282328270|gb|EFB58548.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331761|gb|EFB61272.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus Btn1260] gi|282596101|gb|EFC01062.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus aureus subsp. aureus C160] gi|283790807|gb|EFC29622.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus aureus subsp. aureus A017934/97] gi|290920932|gb|EFD97993.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus aureus subsp. aureus M1015] gi|291095442|gb|EFE25703.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus 58-424] gi|291467479|gb|EFF09994.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus M809] gi|295128885|gb|EFG58515.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576850|gb|EFH95565.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus MN8] gi|312439022|gb|ADQ78093.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus TCH60] gi|315193922|gb|EFU24316.1| putative deaminase [Staphylococcus aureus subsp. aureus CGS00] Length = 156 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A+EEA+ AA E+P+GA+ ++++I+RA N L+ TAHAE +AI ++L Sbjct: 7 FMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I ++RI R+ YGA +PKGG + + +H Sbjct: 67 GSWRLEDCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRA 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ ++ FFK R Sbjct: 127 IVDKGVLKEACSTLLTTFFKNLR 149 >gi|327463521|gb|EGF09840.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1057] gi|327467872|gb|EGF13362.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK330] Length = 156 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 66 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+Q+FF++RR Sbjct: 126 RLNHRVEVETGVLQEECAQIMQEFFRQRR 154 >gi|254361249|ref|ZP_04977392.1| cytosine deaminase [Mannheimia haemolytica PHL213] gi|153092745|gb|EDN73788.1| cytosine deaminase [Mannheimia haemolytica PHL213] Length = 174 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 62/144 (43%), Positives = 84/144 (58%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL+ A A + EIPVGAV V N +II R N+ +L D +AHAE+ AIR + Sbjct: 21 FMQYALDLADLAEAKGEIPVGAVLVDKNQQIIGRGWNQTIQLCDPSAHAEMQAIRQAGQT 80 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + LYVTLEPC MCA AI +RI+RL +GAS+ K G + + + +H Sbjct: 81 LGNYRLLDCTLYVTLEPCPMCAGAILHSRIKRLVFGASDYKTGAVGSRYHLFEDYKMNHF 140 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E++ + + Q I DFFK+RR Sbjct: 141 LEVHGNVLGRECSQKISDFFKQRR 164 >gi|323142068|ref|ZP_08076916.1| cytidine and deoxycytidylate deaminase zinc-binding region [Phascolarctobacterium sp. YIT 12067] gi|322413455|gb|EFY04326.1| cytidine and deoxycytidylate deaminase zinc-binding region [Phascolarctobacterium sp. YIT 12067] Length = 166 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 58/145 (40%), Positives = 81/145 (55%), Gaps = 2/145 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAV--AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL EA+ AA EIP+GAV + ++I+ A N D TAHAE++ IR C Sbjct: 6 YMQLALAEARKAAELGEIPIGAVLADMTTGEVIAAAHNMRETWHDATAHAEVIVIREACE 65 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + L LYVT+EPC MC+ AI R+ R+ YG + K GG E+ T +H Sbjct: 66 RLGRWRLSGCALYVTVEPCPMCSGAIVNGRVDRVVYGCHDVKAGGAESIFNIITNPNLNH 125 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ GI E+ Q+++DFF+ RR Sbjct: 126 CAEVISGICEEECAQVMRDFFRRRR 150 >gi|125718966|ref|YP_001036099.1| hypothetical protein SSA_2184 [Streptococcus sanguinis SK36] gi|125498883|gb|ABN45549.1| Conserved hypothetical protein [Streptococcus sanguinis SK36] Length = 156 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 66 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+Q+FF++RR Sbjct: 126 RLNHRVEVEAGVLQEECAQIMQEFFRQRR 154 >gi|160882011|ref|YP_001560979.1| CMP/dCMP deaminase zinc-binding [Clostridium phytofermentans ISDg] gi|160430677|gb|ABX44240.1| CMP/dCMP deaminase zinc-binding [Clostridium phytofermentans ISDg] Length = 161 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 54/139 (38%), Positives = 80/139 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ +A+ AAL E+P+G V V +NKII+R N+ K AHAEILAI R L Sbjct: 7 YMKAAIVQAKKAALIGEVPIGCVIVYDNKIIARGYNKRNTKKTTLAHAEILAIEKASRYL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +YVTLEPC MC+ AI +R+ R+ G+ NPK G + + +H Sbjct: 67 NDWRLEGCTMYVTLEPCQMCSGAIVQSRMDRVVIGSMNPKAGCAGSILNLLQMEQFNHQV 126 Query: 127 EIYPGISEQRSRQIIQDFF 145 E+ G+ ++ +++QDFF Sbjct: 127 ELETGVMQEECTKLLQDFF 145 >gi|325295641|ref|YP_004282155.1| CMP/dCMP deaminase zinc-binding protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066089|gb|ADY74096.1| CMP/dCMP deaminase zinc-binding protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 155 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ ++F+ AL+EA+ A E+P+GA+ V + KIISRA NR L+D TAHAE+LAI+ Sbjct: 1 MELDHLFLLEALKEAKKAFKLGEVPIGAIIVKDRKIISRAFNRKEFLQDPTAHAELLAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R L+ L LY T+EPC MC I +RI RL Y +PK GGIE+ + Sbjct: 61 EASRKLNSWRLNGCTLYSTVEPCIMCCGVIIQSRIDRLVYSVPDPKFGGIESLYTIFKDK 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ I + + +++++FFK R Sbjct: 121 KVNHRLEV-KKIYIKEAEELLKEFFKALR 148 >gi|163782336|ref|ZP_02177334.1| hypothetical protein HG1285_06100 [Hydrogenivirga sp. 128-5-R1-1] gi|159882369|gb|EDP75875.1| hypothetical protein HG1285_06100 [Hydrogenivirga sp. 128-5-R1-1] Length = 147 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 86/149 (57%), Gaps = 9/149 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 VF+ AL+EA+ A E+PVG V V +++RA NR ELKD +AHAE+LA+R + Sbjct: 3 EVFLKEALKEAERAYALGEVPVGCVVVKGGNVLARAHNRTEELKDASAHAELLALREAAK 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC-- 122 +L L +LYVTLEPC MCA A+ L R+ R+ +G + K GG+ Y+L Sbjct: 63 VLGDWRLEGCELYVTLEPCVMCAYALILFRVDRVVFGTPDRKHGGV---MSLYSLLDDER 119 Query: 123 --HHSPEIYPGISEQRSRQIIQDFFKERR 149 H +Y E +++++FFKERR Sbjct: 120 FNHRVKWVYEPCEE--CGRLLREFFKERR 146 >gi|308187798|ref|YP_003931929.1| tRNA-specific adenosine deaminase [Pantoea vagans C9-1] gi|308058308|gb|ADO10480.1| tRNA-specific adenosine deaminase [Pantoea vagans C9-1] Length = 163 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 57/148 (38%), Positives = 83/148 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL A+ A + E+PVGAV V N+++I NR D TAHAEI+A+R Sbjct: 3 QQDEYWMRHALSLARRAWEQGEVPVGAVLVQNDRVIGEGWNRPIGQHDPTAHAEIMALRQ 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G ++L L + LYVTLEPC MCA A+ +RI RL YGA + K G + Sbjct: 63 GGKVLENYRLLDTTLYVTLEPCVMCAGAMVHSRISRLVYGAHDIKSGAAGSLLDVLGHPG 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E++ G+ + ++ DFF+ RR Sbjct: 123 MNHQVELHSGVLAEECAAMLSDFFRMRR 150 >gi|283778333|ref|YP_003369088.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM 6068] gi|283436786|gb|ADB15228.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM 6068] Length = 155 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 84/145 (57%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + +M AL EA A +E+PVGAV V + ++I+ A N+ L D TAHAE++AI Sbjct: 6 DYYMQLALNEASAAFDEDEVPVGAVIVHSGRVIAAAHNQREALHDPTAHAEMIAITQAAE 65 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L LYVTLEPC MC+ AI AR+ + YGA++PK G + + T +H Sbjct: 66 SMGDWRLEGCTLYVTLEPCIMCSGAILQARVPTVVYGATDPKAGAVGSLFHLLTDERLNH 125 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ PGI + S +I+ FF+++R Sbjct: 126 RCQVVPGILAKPSGEILTRFFQQQR 150 >gi|295702259|ref|YP_003595334.1| tRNA-specific adenosine deaminase [Bacillus megaterium DSM 319] gi|294799918|gb|ADF36984.1| tRNA-specific adenosine deaminase [Bacillus megaterium DSM 319] Length = 156 Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A++EA A + E+P+GAV V N+++++ A N + AHAE+LAI C+ L Sbjct: 7 YMRLAIDEALKAKDKLEVPIGAVIVQNDEVVASAYNLRETEQRSVAHAELLAIDEACKKL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI L+R++R+ +GA +PKGG +H Sbjct: 67 RTWRLEDATLYVTLEPCPMCAGAIVLSRVKRVVFGAYDPKGGCAGTLLNLLKFEKFNHQA 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ FF+E R Sbjct: 127 EVVGGMLEEECGSLLTTFFRELR 149 >gi|260886684|ref|ZP_05897947.1| tRNA-specific adenosine deaminase [Selenomonas sputigena ATCC 35185] gi|330839487|ref|YP_004414067.1| CMP/dCMP deaminase zinc-binding protein [Selenomonas sputigena ATCC 35185] gi|260863536|gb|EEX78036.1| tRNA-specific adenosine deaminase [Selenomonas sputigena ATCC 35185] gi|329747251|gb|AEC00608.1| CMP/dCMP deaminase zinc-binding protein [Selenomonas sputigena ATCC 35185] Length = 168 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 84/144 (58%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL+EAQ A E+P+GAV V + +++RA N D TAHAEI+A++ R Sbjct: 7 FMKEALKEAQEAFQAGEVPIGAVLVDADGTVVARAHNMRETWHDGTAHAEIIALQEAARK 66 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L + LYVT+EPC MCA A+ ++R+ R+ YGA++ K G E+ +H Sbjct: 67 LGRWRLSGLTLYVTIEPCPMCAGALVMSRVDRVVYGATDAKAGACESLFNIVRHPALNHQ 126 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E R I++ FF +RR Sbjct: 127 LEMRAGVLEDECRAIMKRFFGQRR 150 >gi|327182903|gb|AEA31350.1| cytidine-deoxycytidylate deaminase [Lactobacillus amylovorus GRL 1118] Length = 168 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 84/144 (58%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+ +A+ A + E+P+GAV V + K+I NR KD T HAE++AI+ C+ Sbjct: 10 YMQLAIAQAKEAEKQGEVPIGAVIVDPDGKVIGTGYNRRELDKDATQHAEMIAIKEACKN 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + +T+ +H Sbjct: 70 LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFTVEKFNHH 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P G+ + Q+++DFF+ R Sbjct: 130 PHAIRGLYRDQCAQMLKDFFRAIR 153 >gi|317493152|ref|ZP_07951575.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918812|gb|EFV40148.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 170 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL AQ A + E+PVGA+ VL++++I + NR D TAHAEI+A++ G +I+ Sbjct: 9 WMKQALALAQKAWEQGEVPVGAILVLDDEVIGQGWNRPITRHDPTAHAEIMALQQGGQIV 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA A+ +RI+RL YGAS+ K G + +H Sbjct: 69 QNYRLLNATLYVTLEPCVMCAGAMVHSRIKRLVYGASDLKTGAAGSLLDVLRHPGMNHQI 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ +++ FF++RR Sbjct: 129 EITAGVMANECSEMLSQFFQQRR 151 >gi|330936949|gb|EGH41059.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. pisi str. 1704B] Length = 169 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL A AL E+PVGAV V N +II R N D +AHAE++AIR + L Sbjct: 15 FMREALALASQGALLGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRDAAKAL 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ A +H Sbjct: 75 DNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAFLNHRV 134 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ + ++ +FF+ RR Sbjct: 135 LFEGGVLGEECGTMLSEFFRMRR 157 >gi|238753915|ref|ZP_04615275.1| tRNA-specific adenosine deaminase [Yersinia ruckeri ATCC 29473] gi|238707903|gb|EEQ00261.1| tRNA-specific adenosine deaminase [Yersinia ruckeri ATCC 29473] Length = 171 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALE AQ A E+PVGAV VL+N+ I NR D TAHAE++A+R G + L Sbjct: 10 WMRQALELAQRAQEEGEVPVGAVLVLDNQAIGIGWNRPIVHHDPTAHAEMMALRQGGQAL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA A+ +RIRRL YGA++ K G + +H Sbjct: 70 QNYRLLNATLYVTLEPCVMCAGAMVHSRIRRLVYGANDIKTGAAGSLLDILRHPGMNHQV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q + FF++RR Sbjct: 130 EITAGVLAEECSQTLSTFFRQRR 152 >gi|146319707|ref|YP_001199419.1| cytosine/adenosine deaminase [Streptococcus suis 05ZYH33] gi|253752698|ref|YP_003025839.1| deaminase [Streptococcus suis SC84] gi|253754524|ref|YP_003027665.1| deaminase [Streptococcus suis P1/7] gi|253756457|ref|YP_003029597.1| deaminase [Streptococcus suis BM407] gi|145690513|gb|ABP91019.1| Cytosine/adenosine deaminase [Streptococcus suis 05ZYH33] gi|251816987|emb|CAZ52636.1| putative deaminase [Streptococcus suis SC84] gi|251818921|emb|CAZ56764.1| putative deaminase [Streptococcus suis BM407] gi|251820770|emb|CAR47532.1| putative deaminase [Streptococcus suis P1/7] gi|292559319|gb|ADE32320.1| Cytosine/adenosine deaminase [Streptococcus suis GZ1] gi|319759114|gb|ADV71056.1| cytosine/adenosine deaminase [Streptococcus suis JS14] Length = 173 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ AL+EA+ + ++EIP+G V V + +II R N EL HAE++AI+ + Sbjct: 11 FMTQALQEARKSLEKDEIPIGCVIVKDGQIIGRGHNAREELNQAIMHAEVMAIQEANNVE 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LARI ++ YGA+N K G + T +H Sbjct: 71 GNWRLLDSTLFVTIEPCVMCSGAIGLARIPQVIYGATNKKFGAAGSLYDILTDERLNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI E I+QDFF++RR Sbjct: 131 KVETGILEAECANIMQDFFRQRR 153 >gi|53711997|ref|YP_097989.1| putative cytosine/adenosine deaminase [Bacteroides fragilis YCH46] gi|60680198|ref|YP_210342.1| cytosine deaminase [Bacteroides fragilis NCTC 9343] gi|253563968|ref|ZP_04841425.1| cytosine deaminase [Bacteroides sp. 3_2_5] gi|265765335|ref|ZP_06093610.1| ComE operon protein 2 [Bacteroides sp. 2_1_16] gi|52214862|dbj|BAD47455.1| putative cytosine/adenosine deaminase [Bacteroides fragilis YCH46] gi|60491632|emb|CAH06384.1| possible cytosine deaminase [Bacteroides fragilis NCTC 9343] gi|251947744|gb|EES88026.1| cytosine deaminase [Bacteroides sp. 3_2_5] gi|263254719|gb|EEZ26153.1| ComE operon protein 2 [Bacteroides sp. 2_1_16] gi|301161723|emb|CBW21263.1| possible cytosine deaminase [Bacteroides fragilis 638R] Length = 145 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM AL EA A R E+PVGAV V +II+RA N L DVTAHAE+ AI Sbjct: 1 MLDDSYFMKQALIEAVKAGERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y Sbjct: 61 AAANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDDK-----RGYQRYAPQ 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI +++DFF +R Sbjct: 116 ALHPKTVVVKGILADECAGLMKDFFAAKR 144 >gi|330833669|ref|YP_004402494.1| cytosine/adenosine deaminase [Streptococcus suis ST3] gi|329307892|gb|AEB82308.1| cytosine/adenosine deaminase [Streptococcus suis ST3] Length = 173 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ AL+EA+ + ++EIP+G V V + +II R N EL HAE++AI+ + Sbjct: 11 FMTQALQEARKSLEKDEIPIGCVIVKDGQIIGRGHNAREELNQAIMHAEVMAIQEANNVE 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LARI ++ YGA+N K G + T +H Sbjct: 71 GNWRLLDSTLFVTIEPCVMCSGAIGLARIPQVIYGATNKKFGAAGSLYDILTDERLNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI E I+QDFF++RR Sbjct: 131 KVETGILEAECANIMQDFFRQRR 153 >gi|224475714|ref|YP_002633320.1| putative deaminase [Staphylococcus carnosus subsp. carnosus TM300] gi|222420321|emb|CAL27135.1| putative deaminase [Staphylococcus carnosus subsp. carnosus TM300] Length = 159 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALEEA+ A E+P+GA+ V ++I+RA N ++ TAHAE +AI + Sbjct: 7 YMKLALEEAKKAERIGEVPIGAIVVKEGEVIARAHNLRETVQQPTAHAEHIAIEKAAEAV 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MC+ AI ++RI R+ YGAS+PKGG + +H Sbjct: 67 GSWRLEDCTLYVTLEPCVMCSGAIVMSRIPRVVYGASDPKGGCSGSLMDLLQEPRFNHRA 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E I++ FFK+ R Sbjct: 127 EVVSGVLENECGAILKSFFKQLR 149 >gi|304558173|gb|ADM40837.1| tRNA-specific adenosine-34 deaminase [Edwardsiella tarda FL6-60] Length = 170 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+ A+ A + E+PVGAV VLN+++I NR D TAHAEI+A++ G I+ Sbjct: 9 WMRHALQLAEKARAQGEVPVGAVLVLNDRVIGEGWNRPITRHDPTAHAEIMALQQGGAIM 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LYVTLEPC MCA A+ +RIRRL YGA + K G + +H Sbjct: 69 QNYRLLEATLYVTLEPCVMCAGAMVHSRIRRLVYGAPDLKTGAAGSLLDVLGHPGMNHRI 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + DFF++RR Sbjct: 129 EVCGGVLADACAAQLSDFFRQRR 151 >gi|255007517|ref|ZP_05279643.1| cytosine deaminase [Bacteroides fragilis 3_1_12] gi|313145211|ref|ZP_07807404.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313133978|gb|EFR51338.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 145 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 80/149 (53%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM AL EA A R E+PVGAV V +II+RA N L DVTAHAE+ AI Sbjct: 1 MLDDSYFMKQALVEAAKAGERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y Sbjct: 61 AAANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEK-----RGYQRYAPK 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + H + GI ++++FF +R Sbjct: 116 SLHPKTVVVKGILADECANLMKNFFASKR 144 >gi|78188173|ref|YP_378511.1| cytosine deaminase, putative [Chlorobium chlorochromatii CaD3] gi|78170372|gb|ABB27468.1| tRNA-adenosine deaminase [Chlorobium chlorochromatii CaD3] Length = 153 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 58/146 (39%), Positives = 82/146 (56%), Gaps = 1/146 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGC 63 N FMS AL EA A + E+PVGAV + +N II R N+ L D TAHAE++A+ Sbjct: 5 NTFMSAALREAIKAYEQREVPVGAVVLDSNGHIIGRGHNQVETLHDATAHAEMIALTAAM 64 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L + L + L VT+EPC MCA AI A++ R+ +GA + K G + Sbjct: 65 ATLGNKYLDDCTLAVTMEPCPMCAGAIVNAKVGRVIFGAYDSKMGACGTVLNITGNRVLN 124 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H PE++ GI E + ++++Q FFK R Sbjct: 125 HQPEVFGGIMEHKCQELLQSFFKSLR 150 >gi|153952715|ref|YP_001393480.1| hypothetical protein CKL_0054 [Clostridium kluyveri DSM 555] gi|219853386|ref|YP_002470508.1| hypothetical protein CKR_0043 [Clostridium kluyveri NBRC 12016] gi|146345596|gb|EDK32132.1| TadA [Clostridium kluyveri DSM 555] gi|219567110|dbj|BAH05094.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 145 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 79/143 (55%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+++A+ A E+PVGAV V NN IISRA N LKD TAHAEILAIR +++ Sbjct: 4 FMFEAIKQAEMALQLGEVPVGAVVVKNNNIISRAYNLKETLKDSTAHAEILAIRSASKVV 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + +YVTLEPC MCA AI RI RLY G +P G + +H Sbjct: 64 KNWRLKDCSMYVTLEPCPMCAGAILQCRISRLYIGTFDPVMGACGSVVNILQNNFLNHWI 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I + +++ FFK RR Sbjct: 124 DI-QWLYNNECSNMLKKFFKNRR 145 >gi|324995886|gb|EGC27797.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK678] gi|325695392|gb|EGD37292.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK150] gi|327488579|gb|EGF20379.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1058] gi|328944679|gb|EGG38840.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1087] Length = 156 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEAFMREALKEAEIALAYDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 66 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+Q+FF++RR Sbjct: 126 RLNHRVEVETGVLQEECAQIMQEFFRQRR 154 >gi|300311527|ref|YP_003775619.1| cytosine/adenosine deaminases protein [Herbaspirillum seropedicae SmR1] gi|300074312|gb|ADJ63711.1| cytosine/adenosine deaminases protein [Herbaspirillum seropedicae SmR1] Length = 185 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 83/144 (57%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + M ALE+A++A E+PVGAV V + +I+ N+ D TAHAEI+A+R I Sbjct: 20 LHMRAALEQARHAWALGEVPVGAVVVKDGVVIATGFNQPIGKHDPTAHAEIMALRRAAEI 79 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L LP +LYVTLEPC MC+ A+ AR+ R+ +GA++PK G + + +H Sbjct: 80 LGNYRLPGCELYVTLEPCVMCSGAMMHARLARVVFGAADPKTGACGSVLNLFEQDQLNHH 139 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G+ + Q+++DFF RR Sbjct: 140 TALLGGVMAEECGQLLKDFFAMRR 163 >gi|295102136|emb|CBK99681.1| tRNA-adenosine deaminase [Faecalibacterium prausnitzii L2-6] Length = 162 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 83/143 (58%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALEEA+ AA E+PVGAV + +IIS A N K+ HAE+LAI C+ L Sbjct: 6 LMGAALEEARKAAALGEVPVGAVVAKDGEIISAAHNTRETEKNALHHAELLAIDAACKKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + +L+VTLEPC MC+ AI +RI+R+ YGA++ K G + T + HH P Sbjct: 66 GGWRLWQCELFVTLEPCPMCSGAIINSRIKRVVYGAADVKAGCCGSVTDLFAQPFNHH-P 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I G+ ++Q++Q+FF R Sbjct: 125 VIEKGLRADEAQQLLQEFFVSLR 147 >gi|291482388|dbj|BAI83463.1| hypothetical protein BSNT_00036 [Bacillus subtilis subsp. natto BEST195] Length = 161 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 84/147 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + ++M A++EA+ A + E+P+GAV V+N++II+RA N + AHAE+L I Sbjct: 1 MTQDELYMKEAIKEAKKAEEKGEVPIGAVLVVNDEIIARAHNLRETEQRSIAHAEMLVID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG Sbjct: 61 EACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGAFDPKGGCSGTLMNLLQEE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147 +H E+ G+ E+ ++ FF+E Sbjct: 121 RFNHQAEVVSGVLEEECGGMLSAFFRE 147 >gi|104783359|ref|YP_609857.1| cytidine/deoxycytidylate deaminase [Pseudomonas entomophila L48] gi|95112346|emb|CAK17073.1| putative cytidine/deoxycytidylate deaminase [Pseudomonas entomophila L48] Length = 145 Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 58/142 (40%), Positives = 80/142 (56%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALE A A E+PVGAV V + ++I + NR D +AHAE++AIR + S Sbjct: 1 MRLALELAAQGAALGEVPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRAAAKSAS 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ +H Sbjct: 61 NYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRVM 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 G+ Q I+ +FFK RR Sbjct: 121 FEGGVLAQECGAILSEFFKARR 142 >gi|290476033|ref|YP_003468930.1| TadA, tRNA-specific adenosine deaminase [Xenorhabdus bovienii SS-2004] gi|289175363|emb|CBJ82166.1| TadA, tRNA-specific adenosine deaminase [Xenorhabdus bovienii SS-2004] Length = 169 Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 63/143 (44%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+E A A ++EIPVGAV V NNKII+ N D TAHAEI+A+R G L Sbjct: 10 WMRRAMELAMQAQSQDEIPVGAVLVANNKIIAEGYNHPITEHDPTAHAEIIALRRGGIEL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA A+ +RI+RL YGAS+ K G + +H Sbjct: 70 QNYRLLNTTLYVTLEPCVMCAGAMVHSRIQRLVYGASDMKTGAAGSLIDILRHPGMNHQI 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ Q ++ FFK+RR Sbjct: 130 EITAGVLAQECATMLSTFFKQRR 152 >gi|269138128|ref|YP_003294828.1| tRNA-specific adenosine deaminase [Edwardsiella tarda EIB202] gi|267983788|gb|ACY83617.1| tRNA-specific adenosine deaminase [Edwardsiella tarda EIB202] Length = 180 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+ A+ A + E+PVGAV VLN+++I NR D TAHAEI+A++ G I+ Sbjct: 19 WMRHALQLAEKARAQGEVPVGAVLVLNDRVIGEGWNRPITRHDPTAHAEIMALQQGGAIM 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LYVTLEPC MCA A+ +RIRRL YGA + K G + +H Sbjct: 79 QNYRLLEATLYVTLEPCVMCAGAMVHSRIRRLVYGAPDLKTGAAGSLLDVLGHPGMNHRI 138 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + DFF++RR Sbjct: 139 EVCGGVLADACAAQLSDFFRQRR 161 >gi|296276694|ref|ZP_06859201.1| putative tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus MR1] Length = 156 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A+EEA+ AA E+P+GA+ ++++I+RA N L+ TAHAE +AI ++L Sbjct: 7 FMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA I ++RI R+ YGA +PKGG + + +H Sbjct: 67 GSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSSSLMNLLQQSNFNHRA 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ ++ FFK R Sbjct: 127 IVDKGVLKEACSTLLTTFFKNLR 149 >gi|317475163|ref|ZP_07934430.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides eggerthii 1_2_48FAA] gi|316908616|gb|EFV30303.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides eggerthii 1_2_48FAA] Length = 144 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 59/145 (40%), Positives = 79/145 (54%), Gaps = 5/145 (3%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N +M AL EAQ A R E+PVGAV V +++I+RA N L DVTAHAE+ AI Sbjct: 4 NYYMKQALLEAQKAGDRGEVPVGAVVVCKDRVIARAHNLTETLTDVTAHAEMQAITAAAS 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + L E LYVT+EPC MCA AI+ A+ RL +GA + K G Q Y H Sbjct: 64 TLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGRLVFGAEDEK-----RGYQRYAPHALHP 118 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + G+ ++++FF +R Sbjct: 119 KTVVVKGVLGDECAALMKNFFAGKR 143 >gi|332365217|gb|EGJ42980.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1059] Length = 179 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 29 IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 89 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 148 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+Q+FF++RR Sbjct: 149 RLNHRVEVEIGVLQEECAQIMQEFFRQRR 177 >gi|313124289|ref|YP_004034548.1| nucleoside deaminase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280852|gb|ADQ61571.1| Nucleoside deaminase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 169 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 52/130 (40%), Positives = 82/130 (63%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 ++E+P+GAV V + +II R NR +D TAHAEILAI+ C+ L L + L+VT Sbjct: 24 QDEVPIGAVVVGPDGQIIGRGYNRRELDEDGTAHAEILAIKEACQKLDSWRLIDCSLFVT 83 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA AI +RI+ +Y+ A +PK G + +++ +H PE+ G+ +++ Sbjct: 84 LEPCAMCAGAIINSRIKEVYFAAMDPKAGAAGSVVDLFSVEKFNHHPEVIRGLYKEQGAL 143 Query: 140 IIQDFFKERR 149 +++DFF+E R Sbjct: 144 LLKDFFREIR 153 >gi|329768262|ref|ZP_08259763.1| hypothetical protein HMPREF0428_01460 [Gemella haemolysans M341] gi|328837461|gb|EGF87090.1| hypothetical protein HMPREF0428_01460 [Gemella haemolysans M341] Length = 155 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK + +M ALEEA+ A + E+P+GAV V++ ++I++A N E + HAE+LAI+ Sbjct: 1 MKDHSYYMEMALEEARRAYAKGEVPIGAVLVVDGEVIAKAHNTREEHQQALNHAEMLAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C L LY T+EPC MC+ AI AR+ + YGAS+PK G + Sbjct: 61 EACEKQGFWRLDNSYLYTTVEPCVMCSGAIVQARVENVIYGASDPKYGCCGSCIDLVGEN 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++++FFKE R Sbjct: 121 KFNHQAEVISGVLEEECSMLMKNFFKELR 149 >gi|255320509|ref|ZP_05361690.1| tRNA-specific adenosine deaminase [Acinetobacter radioresistens SK82] gi|262378401|ref|ZP_06071558.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|255302481|gb|EET81717.1| tRNA-specific adenosine deaminase [Acinetobacter radioresistens SK82] gi|262299686|gb|EEY87598.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 163 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 85/146 (58%), Gaps = 1/146 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + +M A E+A AA + E+PVGAV V NN++I N+ D TAHAEI A+R C+ Sbjct: 9 HYWMQLAYEQAALAASKGEVPVGAVIVSNNQVIGVGHNQPIFKHDPTAHAEIQALREACQ 68 Query: 65 ILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + LP+ LYVTLEPCTMC A+ AR++R+ +GA+ PK G + + + + Sbjct: 69 LTQNYRLPDDTTLYVTLEPCTMCVGALIHARVQRVVFGATEPKAGSLVSARRLLESGYYN 128 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H + G +++ Q + DFF+ RR Sbjct: 129 HLFQFESGCLQEQCSQQLSDFFRMRR 154 >gi|86160056|ref|YP_466841.1| tRNA-adenosine deaminase [Anaeromyxobacter dehalogenans 2CP-C] gi|85776567|gb|ABC83404.1| tRNA-adenosine deaminase [Anaeromyxobacter dehalogenans 2CP-C] Length = 160 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 58/138 (42%), Positives = 79/138 (57%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ AA R E+PVGAVA+ +++ R N +D TAHAE+LAI+ R L Sbjct: 7 MQEALGLAREAAARGEVPVGAVALFEGRVVGRGANAREAARDPTAHAELLAIQEAARTLG 66 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L V L VTLEPC MCA A+ LARI RL YGAS+PK G + +H Sbjct: 67 RWRLTGVTLVVTLEPCAMCAGAMVLARIDRLVYGASDPKAGCTGSLQDLSADPRLNHRFP 126 Query: 128 IYPGISEQRSRQIIQDFF 145 + G+ + S ++++ FF Sbjct: 127 VERGLLAEESGELLRAFF 144 >gi|268611568|ref|ZP_06145295.1| cytosine/adenosine deaminase [Ruminococcus flavefaciens FD-1] Length = 153 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 62/145 (42%), Positives = 82/145 (56%), Gaps = 3/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M ALE A+ A E+PVGAV V +I+ NR K+ AHAEI AI CR Sbjct: 4 YMKRALELAREAFDEGEVPVGAVVVKKTTGEIVGEGRNRRETAKNALAHAEIEAIDQACR 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L LPE LYVTLEPC MC AI +RI +Y+GA + K G E+ + ++L ++ Sbjct: 64 KLGGWRLPECALYVTLEPCPMCCGAIINSRIDNVYFGAYDYKSGSAESVQKMFSLPY-NY 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 PE+ GI E+ I+ +FFKE R Sbjct: 123 RPEVMGGIMEEECSAILSEFFKELR 147 >gi|257062766|ref|YP_003142438.1| tRNA-adenosine deaminase [Slackia heliotrinireducens DSM 20476] gi|256790419|gb|ACV21089.1| tRNA-adenosine deaminase [Slackia heliotrinireducens DSM 20476] Length = 172 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E+A A L E+P+GAV V +II+ N +D +AHAE AI R L Sbjct: 19 FMRAAIEQAHLAELDGEVPIGAVVVCQGEIIAEGRNHRETDQDPSAHAEFSAIMQASREL 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + LP+ +YVTLEPC MC+ + ARI R YGA +PK G + Q + +H+ Sbjct: 79 ERWRLPDCTVYVTLEPCIMCSGLMHQARIGRCVYGAPDPKAGALGTLYQVHADERLNHTF 138 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + ++++DFF +R Sbjct: 139 EVTSGVLQDECARLLKDFFARKR 161 >gi|312898548|ref|ZP_07757938.1| cytidine and deoxycytidylate deaminase zinc-binding region [Megasphaera micronuciformis F0359] gi|310620467|gb|EFQ04037.1| cytidine and deoxycytidylate deaminase zinc-binding region [Megasphaera micronuciformis F0359] Length = 158 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+EEA+ AA EIP+GAV + K I+RA N L TAHAEILAI Sbjct: 1 MTQDEFYMGKAIEEAKKAAAIGEIPIGAVIIYKKKAIARAHNLRETLPSATAHAEILAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR+LS+ L + LYVT EPC MCA A+ +R+ R+ YG +PKGGG + Sbjct: 61 EACRVLSRWRLTDCTLYVTAEPCPMCAGAVVNSRLDRIVYGCPDPKGGGTRSLYTIVEDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ +++ FF++RR Sbjct: 121 RLNHRAQVTAGVRADECADLLKKFFQKRR 149 >gi|293367940|ref|ZP_06614578.1| tRNA-specific adenosine deaminase [Staphylococcus epidermidis M23864:W2(grey)] gi|291317969|gb|EFE58377.1| tRNA-specific adenosine deaminase [Staphylococcus epidermidis M23864:W2(grey)] gi|329737844|gb|EGG74076.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus epidermidis VCU045] Length = 168 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKK + +M A+ EA A E+P+GAV V ++I+RA N L+ TAHAE +AI Sbjct: 1 MKKNHDYMRLAINEAHKAKALGEVPIGAVIVKEGQVIARAHNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L E LYVTLEPC MCA I ++RI ++ YGA++ KGG + Sbjct: 61 RASEVVGSWRLEECTLYVTLEPCVMCAGTIIMSRIPKVVYGATDSKGGCSGSLMNLLEQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E+ ++++ FFKE R Sbjct: 121 QFNHRATVEKGILEEECAELLRSFFKEIR 149 >gi|167758650|ref|ZP_02430777.1| hypothetical protein CLOSCI_00991 [Clostridium scindens ATCC 35704] gi|167663846|gb|EDS07976.1| hypothetical protein CLOSCI_00991 [Clostridium scindens ATCC 35704] Length = 157 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ +A+ A E+P+G V V +KII R NR K+ +HAE++AIR R + Sbjct: 8 YMKEAIRQARKAYAIGEVPIGCVIVYKDKIIGRGYNRRMADKNTLSHAELIAIRKASRKM 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E +YVTLEPC MC+ AI +R+ R+ G NPK G + + +H Sbjct: 68 GDWRLEECTMYVTLEPCQMCSGAIVQSRMSRVVVGCMNPKAGCAGSILNLLQMTEFNHQA 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ Q+++DFFKE R Sbjct: 128 ELTTGVLEEECSQMMKDFFKELR 150 >gi|291520377|emb|CBK75598.1| Cytosine/adenosine deaminases [Butyrivibrio fibrisolvens 16/4] Length = 179 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ AL+EA+ A NE+P+G V V N+KII+R NR K V AHAEI AI+ C+ Sbjct: 30 YMAQALKEARKAYDINEVPIGCVIVQNDKIIARGYNRRNTDKSVLAHAEIAAIQKACKKT 89 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI ARI R+ GA NPK G + + +H Sbjct: 90 GDWRLEDCTLYVTLEPCQMCAGAIVQARIPRVVVGAMNPKAGCAGSILNILQMHQFNHVC 149 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ + + +++++ FF+E R Sbjct: 150 DLETDVLGEECKEMMKSFFEELR 172 >gi|114565589|ref|YP_752743.1| hypothetical protein Swol_0013 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336524|gb|ABI67372.1| tRNA-adenosine deaminase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 151 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A R EIPVGA+ V N KII+RA N +D TAHAE+LA++ R L Sbjct: 6 FMRHALEEAREAYKRGEIPVGAIVVHNGKIIARAHNEKESYQDATAHAEMLALQRAARHL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LY TLEPC MCA A+ R+ L YG ++PK G + +H Sbjct: 66 GHWRLNESVLYCTLEPCVMCAGAMVNVRLGHLVYGVTDPKAGSAGSIYDIVRSPALNHQV 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ ++++ FF R Sbjct: 126 VVEGGVLKEECSELLKRFFASLR 148 >gi|240949642|ref|ZP_04753977.1| tRNA-adenosine deaminase, cytosine/adenosine deaminases [Actinobacillus minor NM305] gi|240295900|gb|EER46576.1| tRNA-adenosine deaminase, cytosine/adenosine deaminases [Actinobacillus minor NM305] Length = 150 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 65/143 (45%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A EIPVGAV + N KI+ NR+ L D TAHAEI AIRM L Sbjct: 1 MQYALSLADKAEQEGEIPVGAVLIDKNGKILGEGWNRSIILSDSTAHAEIQAIRMAGEQL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPCTMCA AI +RI RL +GAS+ K G I + + +H Sbjct: 61 QNYRLLDTTLYVTLEPCTMCAGAILHSRIGRLVFGASDYKTGAIGSRFHLFEDYKMNHFL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ Q I FFK+RR Sbjct: 121 QIRGGVMRDECSQKISAFFKKRR 143 >gi|319655047|ref|ZP_08009117.1| cytidine/deoxycytidylate deaminase [Bacillus sp. 2_A_57_CT2] gi|317393271|gb|EFV74039.1| cytidine/deoxycytidylate deaminase [Bacillus sp. 2_A_57_CT2] Length = 178 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 55/141 (39%), Positives = 82/141 (58%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++M A++EA+ A E+P+GAV VL +II+RA N + AHAE+LAI C+ Sbjct: 11 LYMQEAIKEAKLAEGLEEVPIGAVIVLEGEIIARAHNLREVNQTAIAHAELLAIDQACKN 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LYVTLEPC MC+ +I L+RI+++ YGA +PKGG +H Sbjct: 71 LGTWRLENAVLYVTLEPCPMCSGSIILSRIKKVVYGAKDPKGGCAGTLMNLLQDERFNHQ 130 Query: 126 PEIYPGISEQRSRQIIQDFFK 146 E+ PG+ E+ +++ FF+ Sbjct: 131 SEVVPGVLEEECGEMLSSFFR 151 >gi|294647204|ref|ZP_06724803.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides ovatus SD CC 2a] gi|294809184|ref|ZP_06767900.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides xylanisolvens SD CC 1b] gi|292637491|gb|EFF55910.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides ovatus SD CC 2a] gi|294443578|gb|EFG12329.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides xylanisolvens SD CC 1b] Length = 145 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 78/143 (54%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA AA R E+PVGAV V +II+RA N L DVTAHAE+ I +L Sbjct: 7 FMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQVITAAANVL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y + H Sbjct: 67 GGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEK-----RGYQKYAGSALHPKT 121 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI ++++FF +R Sbjct: 122 VVVKGIMADECAALMKEFFAAKR 144 >gi|253682749|ref|ZP_04863545.1| tRNA-specific adenosine deaminase [Clostridium botulinum D str. 1873] gi|253561071|gb|EES90524.1| tRNA-specific adenosine deaminase [Clostridium botulinum D str. 1873] Length = 147 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/146 (41%), Positives = 84/146 (57%), Gaps = 7/146 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ A +E+PVGA+ V K+I+ A N +LKD TAHAEILAI+ C IL Sbjct: 5 FMKLALKEAKIAKNMDEVPVGAIIVKEGKVIASAHNLREKLKDPTAHAEILAIKKACEIL 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG---GGIENGTQFYTLATCH 123 L + ++YVTLEPC MC AI +RI+++Y G +P G + + Q L T Sbjct: 65 GDWRLSDCEMYVTLEPCPMCTGAIIQSRIKKIYIGTFDPVAGCCGSVVDLVQNRYLNTMI 124 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 +Y + +I+ +FFK RR Sbjct: 125 DVIWLY----HKECSEILTNFFKNRR 146 >gi|148981936|ref|ZP_01816576.1| cytosine/adenosine deaminase [Vibrionales bacterium SWAT-3] gi|145960698|gb|EDK26041.1| cytosine/adenosine deaminase [Vibrionales bacterium SWAT-3] Length = 181 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 82/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +FM A+E A+ A E+PVGAV V + ++IS NR+ D TAHAE+ +R Sbjct: 9 QDEIFMRRAIEVAKKAESEGEVPVGAVLVKDGEVISEGWNRSIGSHDATAHAEVETLRKA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++L L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 69 GQVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFESQAS 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E R+ +Q FFK RR Sbjct: 129 YHYADVEHGLLEDECREQLQAFFKRRR 155 >gi|160891295|ref|ZP_02072298.1| hypothetical protein BACUNI_03744 [Bacteroides uniformis ATCC 8492] gi|156859516|gb|EDO52947.1| hypothetical protein BACUNI_03744 [Bacteroides uniformis ATCC 8492] Length = 138 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/142 (41%), Positives = 78/142 (54%), Gaps = 5/142 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EA A R E+PVGAV V ++II+RA N L DVTAHAE+ AI L Sbjct: 1 MKQALLEAHKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAAAATLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L E LYVT+EPC MCA AI+ A++ RL +GA + K G Q Y H + Sbjct: 61 GKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAEDEK-----RGYQRYASQALHPKTQ 115 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + GI ++++FF +R Sbjct: 116 VVKGILADECAALMKEFFAAKR 137 >gi|119897879|ref|YP_933092.1| cytidine deaminase [Azoarcus sp. BH72] gi|119670292|emb|CAL94205.1| cytidine deaminase [Azoarcus sp. BH72] Length = 154 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/147 (40%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K +FM ALE+A A +E+PVGAV V +I+ R N+ D TAHAE++A+R Sbjct: 2 KDEMFMRAALEQAHLAGACDEVPVGAVVVCEGEIVGRGFNQPIGRHDPTAHAEVMALRDA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L LP +LYVTLEPC MC+ AI ARI R+ YGA +PK G + Y Sbjct: 62 AARLGNYRLPGCELYVTLEPCVMCSGAIMHARIARVVYGARDPKTGVAGSVIDLYAEGRL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ + ++ FF RR Sbjct: 122 NHHASIEGGLLAEECGGLLSSFFAARR 148 >gi|260221448|emb|CBA30021.1| hypothetical protein Csp_A15070 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 408 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ FMS ALE+A A L E+PVGAV V ++I++ NR E D +AHAE++A++ Sbjct: 4 IQSDEYFMSLALEQAIEAELAGEVPVGAVIVKGGQVIAKGRNRTIEWNDPSAHAEVVALK 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R L + L+VTLEPC MC+ AI RI R+ +GA++PK G + + + Sbjct: 64 EAARACGTHRLSGLQLFVTLEPCAMCSGAIFHGRIERVVFGAADPKTGCAGSVLNLFAVD 123 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ I+ FF+ R Sbjct: 124 KLNHHAEVSGGVLSHECSDILVRFFERSR 152 >gi|93006499|ref|YP_580936.1| CMP/dCMP deaminase, zinc-binding [Psychrobacter cryohalolentis K5] gi|92394177|gb|ABE75452.1| tRNA-adenosine deaminase [Psychrobacter cryohalolentis K5] Length = 197 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 58/144 (40%), Positives = 85/144 (59%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ AL+ A+ A + E+PVGAV V N +II + N D TAHAEI+A+R C L Sbjct: 43 WMTEALKLAKQGAEKEEVPVGAVLVHNQQIIGQGFNEPIGRCDATAHAEIVALRDACTRL 102 Query: 67 SQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + LP + LYVTLEPCTMC A+ AR+ RL Y A P+ G + + +H Sbjct: 103 NNYRLPLKTTLYVTLEPCTMCMGAMIHARVDRLVYAAHEPRAGVLGSQMNLAEQPFYNHR 162 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + S Q+++DFF++RR Sbjct: 163 MQVDAGLCREHSSQMLKDFFRQRR 186 >gi|110597776|ref|ZP_01386060.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM 13031] gi|110340683|gb|EAT59163.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM 13031] Length = 153 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 80/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A EA A + E+PVGAV V +N +I R N+ L D TAHAE++A+ + Sbjct: 8 MELAFREAIKAFEKKEVPVGAVIVDSNGHVIGRGYNQVESLCDATAHAEMIALTSAMATI 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L VT+EPC MCA AI A++ R+ +GA +PK G +H P Sbjct: 68 GNKYLEDCTLAVTMEPCPMCAGAIVNAKVGRVVFGAYDPKMGASGTVMNITGCQQLNHQP 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GI E + R ++QDFF+E R Sbjct: 128 EVYGGIMENKCRTLLQDFFRELR 150 >gi|170723352|ref|YP_001751040.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida W619] gi|169761355|gb|ACA74671.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida W619] Length = 159 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+ A A E+PVGAV V + ++I + NR D +AHAE++AIR + Sbjct: 14 FMRMALDLAAQGAALGEVPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRAAAKSA 73 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ +H Sbjct: 74 SNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRV 133 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ + I+ +FFK RR Sbjct: 134 MFEGGVLAEECGAILSEFFKARR 156 >gi|163786614|ref|ZP_02181062.1| putative cytosine/adenosine deaminase [Flavobacteriales bacterium ALC-1] gi|159878474|gb|EDP72530.1| putative cytosine/adenosine deaminase [Flavobacteriales bacterium ALC-1] Length = 149 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 85/143 (59%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ A + EIPVGA+ V+ ++II+R N L DVTAHAE+ AI L Sbjct: 10 FMRKALQEAEVAFEKGEIPVGAIIVVKDRIIARTHNLTELLNDVTAHAEMQAITSAANFL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC MCA A+ ++I ++ YGAS+ + G GT+ H Sbjct: 70 GGKYLIDCTLYVTLEPCQMCAGALYWSQISKIVYGASDEQRGFETMGTKL------HPKT 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI + + ++++ FF E+R Sbjct: 124 KVVSGILAEEASELMKRFFIEKR 146 >gi|311028951|ref|ZP_07707041.1| CMP/dCMP deaminase zinc-binding protein [Bacillus sp. m3-13] Length = 161 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ A E+P+GAV V + K+IS+ N + HAEI+ I C L Sbjct: 6 FMKLAIEEAKKAEALKEVPIGAVLVHDGKVISKGYNLRETTQRSITHAEIMVIDQACEAL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LYVTLEPC MCA AI +RI ++ YGA +PK G + +H Sbjct: 66 QTWRLEEATLYVTLEPCPMCAGAIIQSRIMKVVYGAKDPKAGCAGTLMNILQDSRFNHQT 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI E+ +++ FF++ R Sbjct: 126 EVVSGIMEEECGELLSSFFRKLR 148 >gi|300811153|ref|ZP_07091665.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497857|gb|EFK32867.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 171 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 51/130 (39%), Positives = 83/130 (63%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 ++E+P+GAV V + +II + NR +D TAHAEILAI+ C+ L L + L+VT Sbjct: 24 QDEVPIGAVVVGPDGQIIGQGYNRRELDEDGTAHAEILAIKEACQKLDSWRLIDCSLFVT 83 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA AI +RI+ +Y+ A +PK G + +++ +H P++ G+ +++ Q Sbjct: 84 LEPCAMCAGAIINSRIKEVYFAAMDPKAGAAGSVVDLFSVEKFNHHPKVIRGLYKEQGAQ 143 Query: 140 IIQDFFKERR 149 +++DFF+E R Sbjct: 144 LLKDFFREIR 153 >gi|294496892|ref|YP_003560592.1| tRNA-specific adenosine deaminase [Bacillus megaterium QM B1551] gi|294346829|gb|ADE67158.1| tRNA-specific adenosine deaminase [Bacillus megaterium QM B1551] Length = 156 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A++EA A + E+P+GAV V N+++++ A N + AHAE+LAI C+ L Sbjct: 7 YMRLAIDEALKAKDKLEVPIGAVIVQNDEVVASAYNLRETEQRSVAHAELLAIDEACKKL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI L+R++R+ +GA +PKGG +H Sbjct: 67 GTWRLEDATLYVTLEPCPMCAGAIVLSRVKRVVFGAYDPKGGCAGTLLNLLEFEKFNHQA 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E+ ++ FF+E R Sbjct: 127 QVVGGMLEEECGSLLTTFFRELR 149 >gi|282915881|ref|ZP_06323646.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus D139] gi|283769715|ref|ZP_06342607.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus H19] gi|282320177|gb|EFB50522.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus D139] gi|283459862|gb|EFC06952.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus H19] Length = 156 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A+EEA+ AA E+P+GAV ++++I+RA N L+ TAHAE +AI ++L Sbjct: 7 FMTLAIEEAKKAARLGEVPIGAVITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA I ++RI R+ YGA +PKGG + + +H Sbjct: 67 GSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRA 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ ++ FFK R Sbjct: 127 IVDKGVLKEACSTLLTTFFKNLR 149 >gi|261492526|ref|ZP_05989079.1| cytosine deaminase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496801|ref|ZP_05993175.1| cytosine deaminase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307548|gb|EEY08877.1| cytosine deaminase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311685|gb|EEY12835.1| cytosine deaminase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 174 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 62/144 (43%), Positives = 83/144 (57%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL+ A A + EIPVGAV V N +II R N+ +L D +AHAE+ AIR + Sbjct: 21 FMQYALDLADLAEAKGEIPVGAVLVDKNQQIIGRGWNQTIQLCDPSAHAEMQAIRQAGQT 80 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + LYVTLEPC MCA AI +RI+RL +GAS+ K G + + + +H Sbjct: 81 LGNYRLLDCTLYVTLEPCPMCAGAILHSRIKRLVFGASDYKTGAVGSRYHLFEDYKMNHF 140 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ + + Q I DFFK+RR Sbjct: 141 LEVQGNVLGRECSQKISDFFKQRR 164 >gi|16077086|ref|NP_387899.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp. subtilis str. 168] gi|221307827|ref|ZP_03589674.1| hypothetical protein Bsubs1_00090 [Bacillus subtilis subsp. subtilis str. 168] gi|221312149|ref|ZP_03593954.1| hypothetical protein BsubsN3_00090 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317082|ref|ZP_03598376.1| hypothetical protein BsubsJ_00090 [Bacillus subtilis subsp. subtilis str. JH642] gi|221321345|ref|ZP_03602639.1| hypothetical protein BsubsS_00090 [Bacillus subtilis subsp. subtilis str. SMY] gi|112703|sp|P21335|TADA_BACSU RecName: Full=tRNA-specific adenosine deaminase gi|40011|emb|CAA36389.1| unnamed protein product [Bacillus subtilis subsp. subtilis str. 168] gi|467408|dbj|BAA05254.1| unknown [Bacillus subtilis] gi|2632285|emb|CAB11794.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp. subtilis str. 168] gi|227231|prf||1617102A 17kD protein Length = 161 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 83/147 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + ++M A++EA+ A + E+P+GAV V+N +II+RA N + AHAE+L I Sbjct: 1 MTQDELYMKEAIKEAKKAEEKGEVPIGAVLVINGEIIARAHNLRETEQRSIAHAEMLVID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG Sbjct: 61 EACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGAFDPKGGCSGTLMNLLQEE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147 +H E+ G+ E+ ++ FF+E Sbjct: 121 RFNHQAEVVSGVLEEECGGMLSAFFRE 147 >gi|283768643|ref|ZP_06341555.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bulleidia extructa W1219] gi|283105035|gb|EFC06407.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bulleidia extructa W1219] Length = 195 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 83/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +MS A+EEA+ A L +E+P+G V V ++ +I+R N + HAE+ AI ++ Sbjct: 48 YMSLAIEEAKKAELSDEVPIGCVIVCDDMVIARNHNHKESKNNAIYHAEVEAILEASKVK 107 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + DLYVTLEPC MC AI +R+R +YYGA + K G ++ + +H P Sbjct: 108 NNWNLNDCDLYVTLEPCMMCTGAILNSRLRTIYYGADSFKAGFLKTKINLEAIRGLNHYP 167 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I G+ E+ Q++ +F+++R Sbjct: 168 VIKKGVLERECAQLLSRYFQKKR 190 >gi|189468213|ref|ZP_03016998.1| hypothetical protein BACINT_04609 [Bacteroides intestinalis DSM 17393] gi|189436477|gb|EDV05462.1| hypothetical protein BACINT_04609 [Bacteroides intestinalis DSM 17393] Length = 139 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/142 (42%), Positives = 78/142 (54%), Gaps = 5/142 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EA+ AA R E+PVGA+ V +II+RA N L DVTAHAE+ AI L Sbjct: 1 MKQALVEARKAAERGEVPVGAIVVCKERIIARAHNLTETLTDVTAHAEMQAITAAASTLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L E LYVT+EPC MCA AI+ A++ RL +GA + K G Q Y H Sbjct: 61 GKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAEDEK-----RGYQRYAPQALHPKTV 115 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + GI +++DFF +R Sbjct: 116 VVKGILADDCAALMKDFFAAKR 137 >gi|193213141|ref|YP_001999094.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327] gi|193086618|gb|ACF11894.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327] Length = 152 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/150 (39%), Positives = 80/150 (53%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M N M A EA A E+PVGAV + N +I R N+ L D TAHAE++A+ Sbjct: 1 MSDLNRCMELAFREAIKAYESKEVPVGAVVLDPNGLVIGRGYNQVETLSDATAHAEMIAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L + L L VTLEPC MCA AI L++I R+ +GA +PK G Sbjct: 61 TSAMATLDNKYLEGCTLAVTLEPCPMCAGAIVLSKISRVVFGAWDPKMGASGTVLNVTGC 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +H PE+Y GI E ++ ++QDFF+ R Sbjct: 121 SALNHQPEVYGGIMEHKAESLLQDFFRGLR 150 >gi|332522875|ref|ZP_08399127.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus porcinus str. Jelinkova 176] gi|332314139|gb|EGJ27124.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus porcinus str. Jelinkova 176] Length = 176 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ + ++ EIP+G V V KII R N EL HAEI+AI Sbjct: 11 FMREALKEAEKSLVKAEIPIGCVIVKEGKIIGRGHNAREELNQAIMHAEIMAINEANVHE 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E L+VT+EPC MC+ AI LARI + +GA N K GG + Q T +H Sbjct: 71 GNWRLLETSLFVTIEPCVMCSGAIGLARIPHVIFGAPNQKFGGAGSLYQILTDQRLNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E QI+QDFF + R Sbjct: 131 ELESGLLEAECAQIMQDFFHQSR 153 >gi|209694336|ref|YP_002262264.1| tRNA-specific adenosine deaminase [Aliivibrio salmonicida LFI1238] gi|208008287|emb|CAQ78433.1| tRNA-specific adenosine deaminase [Aliivibrio salmonicida LFI1238] Length = 177 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 80/144 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +M A+E A A E+PVGAV VLN +II NR+ D TAHAE++AI+ Sbjct: 8 KSATFYMQRAIELASIAEGEGEVPVGAVIVLNGEIIGEGWNRSIGTHDATAHAEMMAIKQ 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + L LYVTLEPC MCA AI +RI+++++GA++ K G + +T AT Sbjct: 68 AGQTVENYRLVNATLYVTLEPCPMCAGAIVQSRIKQVFFGAADLKTGASGSVINLFTAAT 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 H E G+ R+ +Q FF Sbjct: 128 AFHFVECESGLMADECREQLQAFF 151 >gi|159045329|ref|YP_001534123.1| hypothetical protein Dshi_2789 [Dinoroseobacter shibae DFL 12] gi|157913089|gb|ABV94522.1| hypothetical protein Dshi_2789 [Dinoroseobacter shibae DFL 12] Length = 151 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 65/129 (50%), Positives = 87/129 (67%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV + K+++RAGNR REL D TAHAE+LAIR C E LP LYVTL Sbjct: 22 GEVPVGAVLIDPAGKVLARAGNRTRELSDPTAHAEVLAIRAACAAAGSERLPGAVLYVTL 81 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC +CAA I+ ARI RL YGA++PK GG+ +G + ++ HH PE+ GI+ ++ + Sbjct: 82 EPCAICAATIAAARIARLVYGAADPKSGGVAHGARVFSHPQSHHVPEVIDGIAAAQAEAL 141 Query: 141 IQDFFKERR 149 ++DFF RR Sbjct: 142 LKDFFAARR 150 >gi|269468375|gb|EEZ80040.1| cytosine/adenosine deaminase [uncultured SUP05 cluster bacterium] Length = 156 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALE+A+ A +NE+PVGA+ V N+++I+ A N+ D TAHAEI +R+ + L Sbjct: 11 WMKIALEQARFAQAKNEVPVGAILVKNDQLIASAHNQPISNNDPTAHAEIQLLRVAGKRL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + LP LYVTLEPCTMC A+ AR+ R+ +GA + K G + T +H Sbjct: 71 NNYRLPNTTLYVTLEPCTMCLGAMIHARVSRVVFGAYDKKTGVCGSCQDLVTSKCFNHQL 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI E +I FFK RR Sbjct: 131 QAQGGILESECSSLISQFFKNRR 153 >gi|238918820|ref|YP_002932334.1| cytidine and deoxycytidylate deaminase family protein [Edwardsiella ictaluri 93-146] gi|238868388|gb|ACR68099.1| cytidine and deoxycytidylate deaminase family protein [Edwardsiella ictaluri 93-146] Length = 170 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+ A+ A + E+PVGAV VLN+++I NR D TAHAEI+A++ G ++ Sbjct: 9 WMRHALQLAEKARAQGEVPVGAVLVLNDRVIGEGWNRPITRHDPTAHAEIMALQQGGAVM 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LYVTLEPC MCA A+ +RIRRL YGA + K G + +H Sbjct: 69 QNYRLLEATLYVTLEPCVMCAGAMVHSRIRRLVYGAPDLKTGAAGSLLDVLGHPGMNHRI 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + DFF++RR Sbjct: 129 EVCGGVLADACAAQLSDFFRQRR 151 >gi|84388906|ref|ZP_00991114.1| Cytosine/adenosine deaminase [Vibrio splendidus 12B01] gi|84376970|gb|EAP93842.1| Cytosine/adenosine deaminase [Vibrio splendidus 12B01] Length = 194 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/147 (38%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +FM A+E A+ A E+PVGAV V +IIS NR+ D TAHAEI +R Sbjct: 9 QDEIFMRRAIEVAKQAEKEGEVPVGAVLVKEGEIISEGWNRSIGSHDATAHAEIETLRKA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 69 GQALENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFESQAS 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ EQ R +Q FFK RR Sbjct: 129 YHYADVENGLLEQECRDQLQAFFKRRR 155 >gi|15923548|ref|NP_371082.1| cytosine deaminase [Staphylococcus aureus subsp. aureus Mu50] gi|15926236|ref|NP_373769.1| hypothetical protein SA0516 [Staphylococcus aureus subsp. aureus N315] gi|21282242|ref|NP_645330.1| hypothetical protein MW0513 [Staphylococcus aureus subsp. aureus MW2] gi|49485423|ref|YP_042644.1| putative deaminase [Staphylococcus aureus subsp. aureus MSSA476] gi|87160687|ref|YP_493246.1| putative deaminase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194321|ref|YP_499113.1| hypothetical protein SAOUHSC_00541 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148267018|ref|YP_001245961.1| CMP/dCMP deaminase, zinc-binding [Staphylococcus aureus subsp. aureus JH9] gi|150393065|ref|YP_001315740.1| CMP/dCMP deaminase zinc-binding [Staphylococcus aureus subsp. aureus JH1] gi|151220732|ref|YP_001331554.1| hypothetical protein NWMN_0520 [Staphylococcus aureus subsp. aureus str. Newman] gi|156978887|ref|YP_001441146.1| hypothetical protein SAHV_0556 [Staphylococcus aureus subsp. aureus Mu3] gi|161508798|ref|YP_001574457.1| deaminase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221141004|ref|ZP_03565497.1| deaminase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315668|ref|ZP_04838881.1| putative deaminase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732567|ref|ZP_04866732.1| deaminase [Staphylococcus aureus subsp. aureus TCH130] gi|255005352|ref|ZP_05143953.2| putative deaminase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795343|ref|ZP_05644322.1| deaminase [Staphylococcus aureus A9781] gi|258408970|ref|ZP_05681251.1| deaminase [Staphylococcus aureus A9763] gi|258420392|ref|ZP_05683335.1| tRNA-adenosine deaminase [Staphylococcus aureus A9719] gi|258422595|ref|ZP_05685501.1| CMP/dCMP deaminase, zinc-binding [Staphylococcus aureus A9635] gi|258439312|ref|ZP_05690244.1| cytosine deaminase [Staphylococcus aureus A9299] gi|258444052|ref|ZP_05692389.1| tRNA-adenosine deaminase [Staphylococcus aureus A8115] gi|258446321|ref|ZP_05694479.1| CMP/dCMP deaminase zinc-binding [Staphylococcus aureus A6300] gi|258448414|ref|ZP_05696529.1| deaminase [Staphylococcus aureus A6224] gi|258452708|ref|ZP_05700706.1| conserved hypothetical protein [Staphylococcus aureus A5948] gi|258453770|ref|ZP_05701744.1| cytosine deaminase [Staphylococcus aureus A5937] gi|262049601|ref|ZP_06022470.1| hypothetical protein SAD30_0395 [Staphylococcus aureus D30] gi|262052438|ref|ZP_06024638.1| hypothetical protein SA930_0274 [Staphylococcus aureus 930918-3] gi|269202181|ref|YP_003281450.1| putative tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus ED98] gi|282894994|ref|ZP_06303217.1| tRNA-adenosine deaminase [Staphylococcus aureus A8117] gi|282924473|ref|ZP_06332145.1| tRNA-adenosine deaminase [Staphylococcus aureus A9765] gi|282928896|ref|ZP_06336487.1| tRNA-adenosine deaminase [Staphylococcus aureus A10102] gi|294850335|ref|ZP_06791069.1| tRNA-adenosine deaminase [Staphylococcus aureus A9754] gi|295406935|ref|ZP_06816738.1| tRNA-adenosine deaminase [Staphylococcus aureus A8819] gi|297208728|ref|ZP_06925156.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297246241|ref|ZP_06930090.1| tRNA-adenosine deaminase [Staphylococcus aureus A8796] gi|300912818|ref|ZP_07130260.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus TCH70] gi|304381843|ref|ZP_07364490.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|13700450|dbj|BAB41747.1| SA0516 [Staphylococcus aureus subsp. aureus N315] gi|14246326|dbj|BAB56720.1| similar to cytosine deaminase [Staphylococcus aureus subsp. aureus Mu50] gi|21203678|dbj|BAB94378.1| MW0513 [Staphylococcus aureus subsp. aureus MW2] gi|49243866|emb|CAG42291.1| putative deaminase [Staphylococcus aureus subsp. aureus MSSA476] gi|87126661|gb|ABD21175.1| putative deaminase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201879|gb|ABD29689.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740087|gb|ABQ48385.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus JH9] gi|149945517|gb|ABR51453.1| CMP/dCMP deaminase zinc-binding [Staphylococcus aureus subsp. aureus JH1] gi|150373532|dbj|BAF66792.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus str. Newman] gi|156721022|dbj|BAF77439.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|160367607|gb|ABX28578.1| deaminase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253729496|gb|EES98225.1| deaminase [Staphylococcus aureus subsp. aureus TCH130] gi|257789315|gb|EEV27655.1| deaminase [Staphylococcus aureus A9781] gi|257840321|gb|EEV64784.1| deaminase [Staphylococcus aureus A9763] gi|257843582|gb|EEV67988.1| tRNA-adenosine deaminase [Staphylococcus aureus A9719] gi|257847167|gb|EEV71175.1| CMP/dCMP deaminase, zinc-binding [Staphylococcus aureus A9635] gi|257847649|gb|EEV71648.1| cytosine deaminase [Staphylococcus aureus A9299] gi|257850722|gb|EEV74667.1| tRNA-adenosine deaminase [Staphylococcus aureus A8115] gi|257854915|gb|EEV77860.1| CMP/dCMP deaminase zinc-binding [Staphylococcus aureus A6300] gi|257858283|gb|EEV81170.1| deaminase [Staphylococcus aureus A6224] gi|257859581|gb|EEV82431.1| conserved hypothetical protein [Staphylococcus aureus A5948] gi|257864026|gb|EEV86780.1| cytosine deaminase [Staphylococcus aureus A5937] gi|259159684|gb|EEW44728.1| hypothetical protein SA930_0274 [Staphylococcus aureus 930918-3] gi|259162341|gb|EEW46914.1| hypothetical protein SAD30_0395 [Staphylococcus aureus D30] gi|262074471|gb|ACY10444.1| putative tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus ED98] gi|269940131|emb|CBI48507.1| putative deaminase [Staphylococcus aureus subsp. aureus TW20] gi|282589504|gb|EFB94593.1| tRNA-adenosine deaminase [Staphylococcus aureus A10102] gi|282592884|gb|EFB97888.1| tRNA-adenosine deaminase [Staphylococcus aureus A9765] gi|282762676|gb|EFC02813.1| tRNA-adenosine deaminase [Staphylococcus aureus A8117] gi|285816259|gb|ADC36746.1| tRNA-specific adenosine-34 deaminase [Staphylococcus aureus 04-02981] gi|294822847|gb|EFG39282.1| tRNA-adenosine deaminase [Staphylococcus aureus A9754] gi|294968166|gb|EFG44192.1| tRNA-adenosine deaminase [Staphylococcus aureus A8819] gi|296886673|gb|EFH25578.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297176839|gb|EFH36097.1| tRNA-adenosine deaminase [Staphylococcus aureus A8796] gi|300885922|gb|EFK81125.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus TCH70] gi|302332271|gb|ADL22464.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus JKD6159] gi|302750450|gb|ADL64627.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304339629|gb|EFM05576.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312829054|emb|CBX33896.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128851|gb|EFT84850.1| deaminase [Staphylococcus aureus subsp. aureus CGS03] gi|315196629|gb|EFU26976.1| deaminase [Staphylococcus aureus subsp. aureus CGS01] gi|320141577|gb|EFW33416.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus aureus subsp. aureus MRSA131] gi|320141794|gb|EFW33622.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus aureus subsp. aureus MRSA177] gi|323439830|gb|EGA97547.1| putative deaminase [Staphylococcus aureus O11] gi|323443069|gb|EGB00689.1| putative deaminase [Staphylococcus aureus O46] gi|329313279|gb|AEB87692.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus T0131] gi|329727928|gb|EGG64377.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus aureus subsp. aureus 21172] gi|329731027|gb|EGG67400.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus aureus subsp. aureus 21189] gi|329731987|gb|EGG68343.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus aureus subsp. aureus 21193] Length = 156 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A+EEA+ AA E+P+GA+ ++++I+RA N L+ TAHAE +AI ++L Sbjct: 7 FMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA I ++RI R+ YGA +PKGG + + +H Sbjct: 67 GSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRA 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ ++ FFK R Sbjct: 127 IVDKGVLKEACSTLLTTFFKNLR 149 >gi|298693889|gb|ADI97111.1| cytosine deaminase [Staphylococcus aureus subsp. aureus ED133] Length = 156 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A+EEA+ AA E+P+GA+ ++++I+RA N L+ TAHAE +AI ++L Sbjct: 7 FMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA I ++RI R+ YGA +PKGG + + +H Sbjct: 67 GSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRA 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ ++ FFK R Sbjct: 127 IVDKGVLKEACSTLLTTFFKNLR 149 >gi|284023569|ref|ZP_06377967.1| putative tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus 132] Length = 156 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A+EEA+ AA E+P+GA+ ++++I+RA N L+ TAHAE +AI ++L Sbjct: 7 FMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA I ++RI R+ YGA +PKGG + + +H Sbjct: 67 GSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRA 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ ++ FFK R Sbjct: 127 IVDKGVLKEACSTLLTTFFKNLR 149 >gi|324992584|gb|EGC24505.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK405] Length = 156 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 66 EANRHENSWRLLGTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+Q+FF++RR Sbjct: 126 RLNHRVEVETGVLQEECAQIMQEFFRQRR 154 >gi|332519171|ref|ZP_08395638.1| CMP/dCMP deaminase, zinc-binding [Lacinutrix algicola 5H-3-7-4] gi|332045019|gb|EGI81212.1| CMP/dCMP deaminase, zinc-binding [Lacinutrix algicola 5H-3-7-4] Length = 149 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/145 (40%), Positives = 84/145 (57%), Gaps = 6/145 (4%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM AL+EA+ A + EIPVGAV V+ N+II+RA N L DVTAHAE+ AI Sbjct: 8 NYFMKKALQEAEVAFDKGEIPVGAVIVIENRIIARAHNLTELLNDVTAHAEMQAITAAAN 67 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + L LYVTLEPC MCA A+ +++ ++ YGA + + G I T+ H Sbjct: 68 FLGGKYLKNCTLYVTLEPCQMCAGALYWSQVSKIVYGARDEERGCINLQTKL------HP 121 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ GI + + +++ FF E+R Sbjct: 122 KTKLEGGILAKEASSLMKRFFIEKR 146 >gi|258645306|ref|ZP_05732775.1| zinc-binding domain protein [Dialister invisus DSM 15470] gi|260402655|gb|EEW96202.1| zinc-binding domain protein [Dialister invisus DSM 15470] Length = 151 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 86/144 (59%), Gaps = 3/144 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +MS A++EA+ A EIP+GA+ VL++ +I+ A N+ D TAHAEILAI+ IL Sbjct: 6 YMSLAMQEAKKALTSREIPIGAIIVLHDSVIAAAHNQCENRSDPTAHAEILAIKKASAIL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT-CHHS 125 L LYVT+EPC MCA A A + + YGA NP GGI+ ++F + +H+ Sbjct: 66 GNWRLTGCSLYVTIEPCPMCAGAAVNAHLSSIIYGAPNPWYGGID--SKFRIVQNPFNHA 123 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G+ + +Q++ +FF ++R Sbjct: 124 VSVIRGVCQSECQQLMDEFFDDKR 147 >gi|88192205|pdb|2B3J|A Chain A, Crystal Structure Of Staphylococcus Aureus Trna Adenosine Deaminase, Tada, In Complex With Rna gi|88192206|pdb|2B3J|B Chain B, Crystal Structure Of Staphylococcus Aureus Trna Adenosine Deaminase, Tada, In Complex With Rna gi|88192207|pdb|2B3J|C Chain C, Crystal Structure Of Staphylococcus Aureus Trna Adenosine Deaminase, Tada, In Complex With Rna gi|88192208|pdb|2B3J|D Chain D, Crystal Structure Of Staphylococcus Aureus Trna Adenosine Deaminase, Tada, In Complex With Rna Length = 159 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A+EEA+ AA E+P+GA+ ++++I+RA N L+ TAHAE +AI ++L Sbjct: 10 FMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA I ++RI R+ YGA +PKGG + + +H Sbjct: 70 GSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRA 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ ++ FFK R Sbjct: 130 IVDKGVLKEACSTLLTTFFKNLR 152 >gi|321313686|ref|YP_004205973.1| tRNA specific adenosine deaminase [Bacillus subtilis BSn5] gi|320019960|gb|ADV94946.1| tRNA specific adenosine deaminase [Bacillus subtilis BSn5] Length = 161 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/147 (36%), Positives = 84/147 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + ++M A++EA+ A + E+P+GAV V+N++II+RA N + AHAE+L + Sbjct: 1 MTQDELYMKEAIKEAKKAEEKGEVPIGAVLVVNDEIIARAHNLRETEQRSIAHAEMLVMD 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG Sbjct: 61 EACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGAFDPKGGCSGTLMNLLQEE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147 +H E+ G+ E+ ++ FF+E Sbjct: 121 RFNHQAEVVSGVLEEECGGMLSAFFRE 147 >gi|262281785|ref|ZP_06059554.1| cytidine/deoxycytidylate deaminase [Streptococcus sp. 2_1_36FAA] gi|262262239|gb|EEY80936.1| cytidine/deoxycytidylate deaminase [Streptococcus sp. 2_1_36FAA] Length = 162 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ A +EIP+G V V + +II R N EL+ HAEI+AI + Sbjct: 18 FMLEALKEARIALENDEIPIGCVIVRDGQIIGRGHNAREELQRAVMHAEIMAIEEANQHE 77 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L+VT+EPC MC+ AI LARI + YGASN K G + T +H Sbjct: 78 NSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGASNQKFGAAGSLYDILTDERLNHRV 137 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ ++ QI+QDFF+ RR Sbjct: 138 EVETGVLQEECAQIMQDFFRNRR 160 >gi|86145643|ref|ZP_01063973.1| Cytosine/adenosine deaminase [Vibrio sp. MED222] gi|85836614|gb|EAQ54740.1| Cytosine/adenosine deaminase [Vibrio sp. MED222] Length = 212 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 55/147 (37%), Positives = 82/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +FM A+E A+ A E+PVGAV V + ++IS NR+ D TAHAEI +R Sbjct: 27 QDEIFMRRAIEVAKQAEKEGEVPVGAVLVKDGEVISEGWNRSIGCHDATAHAEIETLRKA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 87 GQALENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFESQAS 146 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E+ R+ +Q FFK RR Sbjct: 147 YHYADVEHGLLEEECREQLQAFFKRRR 173 >gi|308171910|ref|YP_003918615.1| tRNA specific adenosine deaminase [Bacillus amyloliquefaciens DSM 7] gi|307604774|emb|CBI41145.1| tRNA specific adenosine deaminase [Bacillus amyloliquefaciens DSM 7] gi|328551718|gb|AEB22210.1| tRNA specific adenosine deaminase [Bacillus amyloliquefaciens TA208] gi|328909978|gb|AEB61574.1| tRNA specific adenosine deaminase [Bacillus amyloliquefaciens LL3] Length = 160 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/139 (38%), Positives = 82/139 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A++EA+ A + E+P+GAV VL+++I++RA N + AHAE+LAI CR L Sbjct: 6 YMREAIKEAKKAEAKGEVPIGAVLVLHDEIVARAHNLRETEQRSLAHAEMLAIDEACRKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG +H Sbjct: 66 GTWRLEDAVLYVTLEPCPMCAGAVVLSRVDKVVFGAFDPKGGCTGTLMNLLQEERFNHQA 125 Query: 127 EIYPGISEQRSRQIIQDFF 145 E+ G+ E+ +++ FF Sbjct: 126 EVVSGVLEEECGEMLSAFF 144 >gi|322418061|ref|YP_004197284.1| CMP/dCMP deaminase zinc-binding protein [Geobacter sp. M18] gi|320124448|gb|ADW12008.1| CMP/dCMP deaminase zinc-binding protein [Geobacter sp. M18] Length = 162 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 1/150 (0%) Query: 1 MKKGN-VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 MKK + +M A+++A+ A E+P+GAV V + +I+R N +D AHAE++AI Sbjct: 1 MKKNDHYWMGKAIDQARKAESIGEVPIGAVIVKDGAVIARGHNLRESKQDPAAHAELIAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + LS L LYVTLEPCTMC AI L+R+ R+ +G+ +PKGG + F Sbjct: 61 RKAAKKLSSWRLTGATLYVTLEPCTMCMGAIILSRLDRVVFGSYDPKGGAAGSLFDFSDD 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +HS + PG+ + + ++ FF + R Sbjct: 121 KRLNHSVVLTPGVRGEETSSMLSCFFAKLR 150 >gi|218708682|ref|YP_002416303.1| tRNA-specific adenosine deaminase [Vibrio splendidus LGP32] gi|218321701|emb|CAV17655.1| tRNA-specific adenosine deaminase [Vibrio splendidus LGP32] Length = 212 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 55/147 (37%), Positives = 82/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +FM A+E A+ A E+PVGAV V + ++IS NR+ D TAHAEI +R Sbjct: 27 QDEIFMRRAIEVAKQAEKEGEVPVGAVLVKDGEVISEGWNRSIGCHDATAHAEIETLRKA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 87 GQALENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFESQAS 146 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E+ R+ +Q FFK RR Sbjct: 147 YHYADVEHGLLEEECREQLQAFFKRRR 173 >gi|238784197|ref|ZP_04628210.1| tRNA-specific adenosine deaminase [Yersinia bercovieri ATCC 43970] gi|238714906|gb|EEQ06905.1| tRNA-specific adenosine deaminase [Yersinia bercovieri ATCC 43970] Length = 181 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A A E+PVGAV VL+N++I NR+ D TAHAEI+A+R G +++ Sbjct: 22 WMQRALMLALRAQEEGEVPVGAVLVLDNQVIGEGWNRSICDSDPTAHAEIMALRQGGQVV 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + +H Sbjct: 82 QNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLLDILRHPGMNHQV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q + FF++RR Sbjct: 142 EISAGVLAEACSQQLSAFFRQRR 164 >gi|258543612|ref|YP_003189045.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-01] gi|256634690|dbj|BAI00666.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-01] gi|256637746|dbj|BAI03715.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-03] gi|256640800|dbj|BAI06762.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-07] gi|256643855|dbj|BAI09810.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-22] gi|256646910|dbj|BAI12858.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-26] gi|256649963|dbj|BAI15904.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-32] gi|256652953|dbj|BAI18887.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256656007|dbj|BAI21934.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-12] Length = 151 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 85/129 (65%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV + +N ++++AGNR EL+D +AHAE+L +R + + L + L+V+L Sbjct: 21 GEVPVGAVLLDSNGNVLAQAGNRVEELRDPSAHAEMLVMREAVQQRQGQKLADCTLFVSL 80 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCAAA++ R+ R+ +GA +PKGGG+E+G + H E+ G+ EQ + ++ Sbjct: 81 EPCPMCAAAMAHFRLGRVVFGAYDPKGGGVEHGARLPYRPETLHRMEVIGGVREQEAAEM 140 Query: 141 IQDFFKERR 149 ++ FF++ R Sbjct: 141 LKAFFQKLR 149 >gi|322386624|ref|ZP_08060249.1| tRNA-specific adenosine deaminase [Streptococcus cristatus ATCC 51100] gi|321269297|gb|EFX52232.1| tRNA-specific adenosine deaminase [Streptococcus cristatus ATCC 51100] Length = 166 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 86/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ +FM AL+EA+ A +EIP+G V V N +II R N EL+ HAEI+AI Sbjct: 16 IEEKEMFMREALKEAEIALANDEIPIGCVLVKNGQIIGRGHNAREELQRAVMHAEIMAIE 75 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L + L+VT+EPC MC+ AI LARI ++ YGA N K G + T A Sbjct: 76 EANQHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPKVIYGAKNQKFGAGGSLYDILTDA 135 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ I+Q+FF+ RR Sbjct: 136 RLNHRVEVESGLLEEECAAIMQNFFRNRR 164 >gi|312864368|ref|ZP_07724601.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus downei F0415] gi|311100089|gb|EFQ58300.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus downei F0415] Length = 157 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EAQ + + EIP+G V V + +II R N EL HAEI+AI + Sbjct: 12 FMQEALKEAQKSLAKEEIPIGCVIVKDGQIIGRGHNAREELNQAIMHAEIMAINQANQTE 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LARI ++ YGA N K G + T +H Sbjct: 72 GNWRLLDSALFVTIEPCVMCSGAIGLARIPQVIYGAPNQKFGAAGSLYDILTDQRLNHHV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI E +I+QDFF+ RR Sbjct: 132 QVETGILEADCAKIMQDFFRNRR 154 >gi|270285018|ref|ZP_06194412.1| cytidine/deoxycytidylate deaminase family protein [Chlamydia muridarum Nigg] gi|270289043|ref|ZP_06195345.1| cytidine/deoxycytidylate deaminase family protein [Chlamydia muridarum Weiss] Length = 148 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/142 (40%), Positives = 78/142 (54%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+EA+ A +E+PVG + V + II+R N LKD TAHAE++ I L Sbjct: 1 MKKALDEARKAYELDEVPVGCIIVQGDAIIARGHNSVERLKDPTAHAEMICISAAAEYLQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LY TLEPC MCA AI LARI R+ +GA + + G + + H E Sbjct: 61 NWRLKDTTLYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEKHPFHQVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 PGI Q S ++++FF E+R Sbjct: 121 CCPGICHQESEWLMKNFFWEKR 142 >gi|262370390|ref|ZP_06063716.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262314732|gb|EEY95773.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 166 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +K + +M ALE+A AA + E+PVGAV V NKII N L D TAHAE+ A+R Sbjct: 5 LKIDSEWMQLALEQAAIAASKGEVPVGAVIVSQNKIIGSGFNAPITLNDPTAHAEVQALR 64 Query: 61 MGCRILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 C+ LP+ +YVTLEPCTMC A+ AR+ ++ +GA+ PK G + + + + Sbjct: 65 DACQNTQNYRLPDDAVMYVTLEPCTMCVGALVHARVSKVVFGATEPKAGSLISARKLFET 124 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G ++ Q + FFK RR Sbjct: 125 GYYNHQFLVESGCLHEQCSQQLSHFFKMRR 154 >gi|220918865|ref|YP_002494169.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter dehalogenans 2CP-1] gi|219956719|gb|ACL67103.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter dehalogenans 2CP-1] Length = 154 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/138 (41%), Positives = 79/138 (57%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ AA R E+PVGAVA+ +++ R N +D TAHAE+LAI+ R L Sbjct: 1 MQEALGLAREAAARGEVPVGAVALFEGRVVGRGANAREAARDPTAHAELLAIQEAARTLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L V + VTLEPC MCA A+ LARI RL YGAS+PK G + +H Sbjct: 61 RWRLTGVTVVVTLEPCAMCAGAMVLARIDRLVYGASDPKAGCTGSLQDLSADPRLNHRFP 120 Query: 128 IYPGISEQRSRQIIQDFF 145 + G+ + S ++++ FF Sbjct: 121 VERGVLAEESGELLRAFF 138 >gi|294055423|ref|YP_003549081.1| CMP/dCMP deaminase zinc-binding protein [Coraliomargarita akajimensis DSM 45221] gi|293614756|gb|ADE54911.1| CMP/dCMP deaminase zinc-binding protein [Coraliomargarita akajimensis DSM 45221] Length = 181 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 81/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM+ A EA A ++E+P+GAV +II+ A N++R D TAHAEILAI Sbjct: 20 DYFMAHAFNEAIEAWKKDEVPIGAVIEYEGRIIASAHNQSRSTNDPTAHAEILAISQAAN 79 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L E LYVT EPC MC+ A+ +ARI ++YYG + K G + L +H Sbjct: 80 TLGDWRLNECRLYVTKEPCPMCSGALVIARIGKVYYGLPDEKMGCVGGAVDLGALPRSNH 139 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E G+ E + I++ FF+++R Sbjct: 140 HFESIGGVMEDANHAILKAFFEKKR 164 >gi|146299285|ref|YP_001193876.1| CMP/dCMP deaminase, zinc-binding [Flavobacterium johnsoniae UW101] gi|146153703|gb|ABQ04557.1| CMP/dCMP deaminase, zinc-binding [Flavobacterium johnsoniae UW101] Length = 147 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 83/143 (58%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ A + EIPVGA+ V+ +K+I+R+ N L DVTAHAE+ +I L Sbjct: 10 FMKKALQEAEIAYEKGEIPVGAIIVVADKVIARSHNLTELLNDVTAHAEMQSITAAANFL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC MCA A+ ++I ++ +GA + + G I GT+ H Sbjct: 70 GGKYLKDCTLYVTLEPCQMCAGALYWSQISKIVFGARDEQRGFINMGTKL------HPKT 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + +++ FF ERR Sbjct: 124 TVVSGVMANEAADLMKRFFLERR 146 >gi|297582358|ref|YP_003698138.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens MLS10] gi|297140815|gb|ADH97572.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens MLS10] Length = 174 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K +M AL EA A E+P+GAV V ++ II+R N + T HAE++AI Sbjct: 8 KDEAYMKEALTEADKAEAIGEVPIGAVIVKDDIIIARGYNERETKQRATGHAELVAIEEA 67 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 CRIL L LYVTLEPC MCA AI +RI R+ YGA +PKGG Sbjct: 68 CRILKTWRLEGCTLYVTLEPCPMCAGAIVQSRIDRVVYGADDPKGGSCGTVVNLLDEPKF 127 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+P + G ++ + + FF+ R Sbjct: 128 NHAPLVTSGTLKEEAADRLSSFFRALR 154 >gi|315037609|ref|YP_004031177.1| cytidine-deoxycytidylate deaminase [Lactobacillus amylovorus GRL 1112] gi|325956088|ref|YP_004286698.1| cytidine-deoxycytidylate deaminase [Lactobacillus acidophilus 30SC] gi|312275742|gb|ADQ58382.1| cytidine-deoxycytidylate deaminase [Lactobacillus amylovorus GRL 1112] gi|325332653|gb|ADZ06561.1| cytidine-deoxycytidylate deaminase [Lactobacillus acidophilus 30SC] Length = 168 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 84/144 (58%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+ +A+ A + E+P+GAV V + K+I NR +D T HAE++AI+ C+ Sbjct: 10 YMQLAIAQAKEAEKQGEVPIGAVIVDPDGKVIGTGYNRRELDEDATQHAEMIAIKEACKN 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + +T+ +H Sbjct: 70 LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFTVEKFNHH 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P G+ + Q+++DFF+ R Sbjct: 130 PHAIRGLYRDQCAQMLKDFFRAIR 153 >gi|304436805|ref|ZP_07396772.1| tRNA-specific adenosine deaminase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370198|gb|EFM23856.1| tRNA-specific adenosine deaminase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 153 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 86/144 (59%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M ALEEA+ A E+P+GAV +L++ +IS N D TAHAE++AIR C+ Sbjct: 8 MRLALEEARRAYQCGEVPIGAV-ILDDVGSVISSGYNLRETEHDATAHAELIAIRRACKA 66 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L + LYVT+EPC MCA AI ++RI R+ YG+++ K G E+ +H Sbjct: 67 LGRWRLTGMTLYVTIEPCPMCAGAIVMSRISRVVYGSTDSKAGACESLFNITGCPGLNHQ 126 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P++ G+ + ++++FF+ERR Sbjct: 127 PDVCAGVLAEECAALLKNFFRERR 150 >gi|330007694|ref|ZP_08306033.1| cytidine and deoxycytidylate deaminase zinc-binding region [Klebsiella sp. MS 92-3] gi|328535375|gb|EGF61857.1| cytidine and deoxycytidylate deaminase zinc-binding region [Klebsiella sp. MS 92-3] Length = 180 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G +L Sbjct: 22 WMRHALTLAKRAWEEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI RL +GA + K G + + +H Sbjct: 82 QNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAVGSLMDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + ++ DFF+ RR Sbjct: 142 EISEGVLAESCSAMLSDFFRWRR 164 >gi|283469850|emb|CAQ49061.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus ST398] Length = 156 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A+EEA+ AA E+P+GAV +++I+RA N L+ TAHAE +AI ++L Sbjct: 7 FMTLAIEEAKKAARLGEVPIGAVITKGDEVIARAHNLRETLQQPTAHAEHIAIERAAKVL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA I ++RI R+ YGA +PKGG + + +H Sbjct: 67 GSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRA 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ ++ FFK R Sbjct: 127 IVDKGVLKEACSTLLTTFFKNLR 149 >gi|322515941|ref|ZP_08068882.1| tRNA-specific adenosine deaminase [Streptococcus vestibularis ATCC 49124] gi|322125615|gb|EFX96945.1| tRNA-specific adenosine deaminase [Streptococcus vestibularis ATCC 49124] Length = 172 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FMS AL+EAQ + + EIP+G V V + +I+ R N EL HAE++AI+ R + Sbjct: 12 FMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAEVMAIQEANRTV 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LARI ++ YGA N K GG + +H Sbjct: 72 GNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDERLNHRV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ + E +I+QDFF++ R Sbjct: 132 EVETSVMEADCAKIMQDFFRQSR 154 >gi|319775162|ref|YP_004137650.1| tRNA-specific adenosine deaminase [Haemophilus influenzae F3047] gi|329122920|ref|ZP_08251491.1| tRNA-specific adenosine deaminase [Haemophilus aegyptius ATCC 11116] gi|317449753|emb|CBY85960.1| tRNA-specific adenosine deaminase [Haemophilus influenzae F3047] gi|327471851|gb|EGF17291.1| tRNA-specific adenosine deaminase [Haemophilus aegyptius ATCC 11116] Length = 173 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 63/143 (44%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A A EIPVGAV V + II N + D TAHAEI+A+R G + + Sbjct: 15 MRYALELADKAEALGEIPVGAVLVDDAGNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMCA AI +RIRRL +GAS+ K G I + F+ +H+ Sbjct: 75 QNYRLLNSTLYVTLEPCTMCAGAILHSRIRRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 134 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q + FF++RR Sbjct: 135 EITSGVLAEECSQKLSTFFQKRR 157 >gi|325108107|ref|YP_004269175.1| tRNA-adenosine deaminase [Planctomyces brasiliensis DSM 5305] gi|324968375|gb|ADY59153.1| tRNA-adenosine deaminase [Planctomyces brasiliensis DSM 5305] Length = 162 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+EA A E+PVGA+ V + +I+ A N+ L D TAHAE++A+ L Sbjct: 15 YMRMALDEAVAAFDEKEVPVGAIIVHDGHVIAAAHNQRETLNDPTAHAEMIALTQAATAL 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI AR+ R+ YG ++ K G + + +H Sbjct: 75 ESWRLEDCTLYVTLEPCPMCAGAIVQARVPRVVYGTTDLKAGACHSLYSITSDPRLNHRS 134 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ PG+ + I+Q+FF+++R Sbjct: 135 EVLPGVLAPDCKAILQEFFRQQR 157 >gi|110636535|ref|YP_676742.1| cytosine/adenosine deaminase [Cytophaga hutchinsonii ATCC 33406] gi|110279216|gb|ABG57402.1| cytosine/adenosine deaminase [Cytophaga hutchinsonii ATCC 33406] Length = 148 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 82/143 (57%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EAQ A + EIPVGAV V NN+IISRA N+ L DVTAHAE+LAI L Sbjct: 10 FMREALKEAQKAFEKGEIPVGAVVVSNNQIISRAYNQTELLSDVTAHAEMLAITAAANHL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L+VTLEPC MCA A++ ++I + Y A + I G + H Sbjct: 70 GGKYLSDCTLFVTLEPCVMCAGALTWSQIGNVVYAAKD-----IRRGYSTISGLKMHPKT 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G + S +++ DFF++ R Sbjct: 125 RVCQGPFSEESEKLLLDFFRKLR 147 >gi|157691308|ref|YP_001485770.1| nucleoside deaminase [Bacillus pumilus SAFR-032] gi|157680066|gb|ABV61210.1| possible nucleoside deaminase [Bacillus pumilus SAFR-032] Length = 158 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM A+ EA A E+P+GA+ V++++I+SRA N + AHAE+LAI Sbjct: 1 MTRDEQFMQEAISEALKAEQIGEVPIGAIIVVDDQIVSRAHNLRETEQRSIAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L + LYVTLEPC MCA AI L+R++++ +GA +PKGG Sbjct: 61 EACKTTESWRLEDAVLYVTLEPCPMCAGAIVLSRVKKVVFGAYDPKGGCAGTLMNLLDDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E +++ FF+ R Sbjct: 121 RFNHQSEVIGGVLENECGELLSQFFRNLR 149 >gi|21673220|ref|NP_661285.1| cytosine deaminase, putative [Chlorobium tepidum TLS] gi|21646303|gb|AAM71627.1| cytosine deaminase, putative [Chlorobium tepidum TLS] Length = 152 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/150 (39%), Positives = 80/150 (53%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M N M A EA A E+PVGAV + N II R N+ L D TAHAE++A+ Sbjct: 1 MSDLNHCMELAFREAIKAYESKEVPVGAVVLDPNGLIIGRGYNQVETLSDATAHAEMIAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + + L L VTLEPC MCA AI L++I R+ +GA +PK G Sbjct: 61 TSAMATIGSKYLEGCTLAVTLEPCPMCAGAIVLSKISRVVFGAWDPKMGAAGTVLNITAC 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+Y GI E+++ ++QDFF+ R Sbjct: 121 NALNHQPEVYGGIMERKAESLLQDFFRGLR 150 >gi|210631978|ref|ZP_03297143.1| hypothetical protein COLSTE_01034 [Collinsella stercoris DSM 13279] gi|210159780|gb|EEA90751.1| hypothetical protein COLSTE_01034 [Collinsella stercoris DSM 13279] Length = 647 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 58/143 (40%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FMS ALEEA+ AA E+P+GAV V ++I+RA NR +D +AHAE A+ R L Sbjct: 11 FMSMALEEARAAASIGEVPIGAVVVHEGRVIARAHNRREADEDPSAHAEFAAMMEASRAL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +YVTLEPC MCA + ARI R +GA +PKGG + +H+ Sbjct: 71 GRWRLTGCTVYVTLEPCLMCAGLMVNARIDRCVFGAYDPKGGAVGTLYDVSCDERLNHAF 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ PG+ E +++ FF+E R Sbjct: 131 DVTPGVLEDECAAVLRAFFQELR 153 >gi|77361256|ref|YP_340831.1| tRNA-specific adenosine deaminase [Pseudoalteromonas haloplanktis TAC125] gi|76876167|emb|CAI87389.1| tRNA-specific adenosine deaminase [Pseudoalteromonas haloplanktis TAC125] Length = 168 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 85/145 (58%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N +M AL A+ A +EIPVGA+ V +N++++ NR+ D +AHAE++A+R G + Sbjct: 8 NYWMQQALTYAKQAEQLDEIPVGAILVKDNQLVAAGYNRSITDNDPSAHAEMMAVRKGGK 67 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L+ L + LYVTLEPC+MCA + +RI+RL +GA++ K G + +H Sbjct: 68 ALNNYRLIDCTLYVTLEPCSMCAGLLVHSRIKRLVFGAADAKTGSAGSIMNLLQEPKLNH 127 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E + II FFK RR Sbjct: 128 QVEVLGGVLEGQCATIISGFFKRRR 152 >gi|149006819|ref|ZP_01830505.1| deoxyuridine 5'-triphosphate nucleotidohydrolase [Streptococcus pneumoniae SP18-BS74] gi|307126250|ref|YP_003878281.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae 670-6B] gi|147761734|gb|EDK68698.1| deoxyuridine 5'-triphosphate nucleotidohydrolase [Streptococcus pneumoniae SP18-BS74] gi|306483312|gb|ADM90181.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae 670-6B] gi|332076481|gb|EGI86943.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Streptococcus pneumoniae GA17545] Length = 155 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 64/151 (42%), Positives = 85/151 (56%), Gaps = 4/151 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LS+E +D L+VT+EPC MC+ AI LARI + YGA N K GG + T Sbjct: 65 DAN--LSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGGAGSLYNILT 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 123 DERLNHRVEVEIGILEDECAAIMQDFFRNRR 153 >gi|169335874|ref|ZP_02863067.1| hypothetical protein ANASTE_02307 [Anaerofustis stercorihominis DSM 17244] gi|169258612|gb|EDS72578.1| hypothetical protein ANASTE_02307 [Anaerofustis stercorihominis DSM 17244] Length = 145 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 62/146 (42%), Positives = 87/146 (59%), Gaps = 5/146 (3%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N +M A++EA + ++PVGA+ V ++KIIS+A N + D TAHAEILAIR C Sbjct: 2 NTYMLLAVQEALKSG--KDVPVGALIVKDDKIISKAHNEVIKNNDPTAHAEILAIREACS 59 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH- 123 IL L +YVTLEPC MCA AI A+I ++ YGA + G G+++ L Sbjct: 60 ILDSYNLSGCSIYVTLEPCPMCAGAIINAKIDKVVYGAMDMDYGAC--GSKYNLLEDNRA 117 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 S E+Y GI E + I++DFF++ R Sbjct: 118 KSIEVYAGIEEDKCSVILKDFFEQIR 143 >gi|194335892|ref|YP_002017686.1| CMP/dCMP deaminase zinc-binding [Pelodictyon phaeoclathratiforme BU-1] gi|194308369|gb|ACF43069.1| CMP/dCMP deaminase zinc-binding [Pelodictyon phaeoclathratiforme BU-1] Length = 155 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 80/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A EA A R E+PVGAV + +N +I R N+ L D TAHAE++A+ L Sbjct: 8 MELAFREAIKAFERKEVPVGAVVLDSNGHVIGRGYNQVEALCDSTAHAEMIALTSAMATL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L VTLEPC MCA AI A++ R+ +GA +PK G +H P Sbjct: 68 GSKYLNDCTLAVTLEPCPMCAGAIVNAKVGRVIFGAYDPKMGAAGTVMNVTGSRQLNHQP 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E++ GI E + R ++QDFF+E R Sbjct: 128 EVFGGIMENKCRNLLQDFFRELR 150 >gi|163753582|ref|ZP_02160705.1| putative cytosine/adenosine deaminase [Kordia algicida OT-1] gi|161325796|gb|EDP97122.1| putative cytosine/adenosine deaminase [Kordia algicida OT-1] Length = 151 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 84/145 (57%), Gaps = 6/145 (4%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM AL+EA+ A + E+PVGAV V++N++I+R N L DVTAHAE+ AI Sbjct: 10 NYFMKKALQEAEMAFEKGEVPVGAVIVIDNRVIARGHNLTETLNDVTAHAEMQAITAAAN 69 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + L LYVTLEPC MCA A+ ++I + YGA + + G I+ T+ H Sbjct: 70 FLGGKYLKRCTLYVTLEPCQMCAGALYWSQISNIVYGARDEERGCIKLNTKL------HP 123 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + G+ + + Q+++ FF ++R Sbjct: 124 KTVMKGGVLAEEASQLLKRFFIQKR 148 >gi|145629986|ref|ZP_01785768.1| hypothetical protein CGSHi22421_08043 [Haemophilus influenzae R3021] gi|144984267|gb|EDJ91690.1| hypothetical protein CGSHi22421_08043 [Haemophilus influenzae R3021] Length = 159 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A A + EIPVGAV V + II N + D TAHAEI+A+R G + + Sbjct: 1 MRYALELADKAEVLGEIPVGAVLVDDAGNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMCA AI +RI+RL +GAS+ K G I + F+ +H+ Sbjct: 61 QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q + FF++RR Sbjct: 121 EITSGVLAEECSQKLSTFFQKRR 143 >gi|313848259|emb|CBY17260.1| putative cytidine/deoxycytidylate deaminase family protein [Chlamydophila psittaci RD1] gi|328914938|gb|AEB55771.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila psittaci 6BC] Length = 157 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM+ AL+EA+ A +E+PVG V V +NKII+R N +L+D TAHAEIL I Sbjct: 3 IEKDIFFMNQALKEARQAYDEDEVPVGCVIVKDNKIIARGHNTTEKLQDPTAHAEILCIG 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + LY TLEPC MCA AI ARIRR+ + A + + G + + Sbjct: 63 AAAQYLENWRLVDTVLYCTLEPCLMCAGAIQQARIRRIVWAAPDLRLGAGGSWINVFKEK 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E GI + + Q+++ FF +R Sbjct: 123 HPFHQVECCSGICREDAEQLMKQFFIGKR 151 >gi|312884996|ref|ZP_07744685.1| tRNA-specific adenosine deaminase [Vibrio caribbenthicus ATCC BAA-2122] gi|309367328|gb|EFP94891.1| tRNA-specific adenosine deaminase [Vibrio caribbenthicus ATCC BAA-2122] Length = 156 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 55/142 (38%), Positives = 79/142 (55%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+E A A E+PVGA+ V + +II+ NR+ D TAHAEI +R +IL Sbjct: 1 MRRAIELAHKAEQEGEVPVGALLVKDGEIIAEGWNRSISTHDATAHAEIEVLRKAGKILE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +R++R+ +GA + K G + + +H + Sbjct: 61 NYRLNDTTLYVTLEPCPMCAGALLHSRVKRIVFGAFDKKTGAAGSVLNLFEHQAAYHYAD 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I G+ E + R +Q FFK RR Sbjct: 121 IEKGVLEHQCRTQLQSFFKRRR 142 >gi|110803707|ref|YP_697380.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens SM101] gi|110684208|gb|ABG87578.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens SM101] Length = 143 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 84/143 (58%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +S ALEEA+ A + E+PVGAV V N +II+RA N LKD TAHAEILAIR C L Sbjct: 1 MLSLALEEAEKAREKGEVPVGAVIVKNGEIIARAHNLKETLKDPTAHAEILAIREACNKL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L ++YVTLEPC MCA AI +R+ ++Y G + G + ++ Sbjct: 61 NNWRLHGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ ++ + +I+ +FFK+RR Sbjct: 121 EVVWE-NDDKCSKILTNFFKDRR 142 >gi|168187922|ref|ZP_02622557.1| tRNA-specific adenosine deaminase [Clostridium botulinum C str. Eklund] gi|169294234|gb|EDS76367.1| tRNA-specific adenosine deaminase [Clostridium botulinum C str. Eklund] Length = 147 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 64/152 (42%), Positives = 88/152 (57%), Gaps = 9/152 (5%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKK FM AL+EA+ A ++E+PVGAV V N +II+ A N L D TAHAE+LAI+ Sbjct: 1 MKKK--FMDIALDEAKLAMEKDEVPVGAVIVRNGEIIASAHNLRETLNDPTAHAEMLAIK 58 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG---GGIENGTQFY 117 +L L E ++YVTLEPC MCA AI +RIR++Y G +P G + N T+ Sbjct: 59 KASSVLKNWRLNECEMYVTLEPCPMCAGAIIQSRIRKIYIGTIDPCAGCCGSVLNLTENI 118 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 L T ++ R +I+ +FFK +R Sbjct: 119 YLNTALG----VKWFNDNRCSEILINFFKSKR 146 >gi|194018067|ref|ZP_03056672.1| tRNA-specific adenosine deaminase [Bacillus pumilus ATCC 7061] gi|194010259|gb|EDW19836.1| tRNA-specific adenosine deaminase [Bacillus pumilus ATCC 7061] Length = 158 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM A+ EA A E+P+GA+ V++++I+SRA N + AHAE+LAI Sbjct: 1 MTRDEQFMQEAISEALKAEQIGEVPIGAIIVVDDQIVSRAHNLRETEQRSIAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L + LYVTLEPC MCA AI L+R++++ +GA +PKGG Sbjct: 61 EACKTTGSWRLEDAVLYVTLEPCPMCAGAIVLSRVKKVVFGAYDPKGGCAGTLMNLLDDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E +++ FF+ R Sbjct: 121 RFNHQSEVIGGVLENECGELLSQFFRNLR 149 >gi|149369606|ref|ZP_01889458.1| putative cytosine/adenosine deaminase [unidentified eubacterium SCB49] gi|149357033|gb|EDM45588.1| putative cytosine/adenosine deaminase [unidentified eubacterium SCB49] Length = 152 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 82/143 (57%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A +EA+ A + EIP+GAV V +NKII+RA N L DVTAHAE+ AI L Sbjct: 13 FMKRAFQEAETAYSQGEIPIGAVIVADNKIIARAHNLTETLNDVTAHAEMQAITAAANYL 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVT+EPC MCA A+ ++I + YGA + + G +E GT+ H Sbjct: 73 GGKYLKGCTLYVTIEPCQMCAGALYWSQISNVVYGARDEQRGCLEMGTKL------HPKT 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + +++ FF E+R Sbjct: 127 KMTGGVLAEECATLLKRFFIEKR 149 >gi|329961864|ref|ZP_08299878.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides fluxus YIT 12057] gi|328531304|gb|EGF58148.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides fluxus YIT 12057] Length = 144 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EAQ A R E+PVGAV V ++II+RA N L DVTAHAE+ AI L Sbjct: 6 YMKQALLEAQKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAAASTL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y H Sbjct: 66 GGKYLNECALYVTVEPCVMCAGAIAWAQTGKLVFGAEDEK-----RGYQRYAPQALHPKT 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++++FF +R Sbjct: 121 MVVKGVLADECAALMKNFFAAKR 143 >gi|332883068|gb|EGK03352.1| hypothetical protein HMPREF9456_01989 [Dysgonomonas mossii DSM 22836] Length = 148 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 52/145 (35%), Positives = 82/145 (56%), Gaps = 5/145 (3%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + +M AL EA+ A + E+P+GAV V +II+R N L DVTAHAE+ AI Sbjct: 9 DYYMRQALNEARQAFDKGEVPIGAVVVCKGRIIARGHNLTETLTDVTAHAEMQAITAAAN 68 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 +L + L + LYVT+EPC MCA + ++I ++ YGA + K G ++ + H Sbjct: 69 VLGGKYLTDCILYVTIEPCPMCAGGLLWSQISKIVYGAKDEK-----KGYSVFSPSILHP 123 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E ++++FFK++R Sbjct: 124 KTEVVSGVMEDECASLMKEFFKQKR 148 >gi|169351621|ref|ZP_02868559.1| hypothetical protein CLOSPI_02401 [Clostridium spiroforme DSM 1552] gi|169291843|gb|EDS73976.1| hypothetical protein CLOSPI_02401 [Clostridium spiroforme DSM 1552] Length = 148 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/144 (41%), Positives = 82/144 (56%), Gaps = 4/144 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A +EA ++E+PVGAV V NN++IS A N TAHAEILAI C+ L Sbjct: 7 FMEIAYQEALKCLEKDEVPVGAVIVKNNEVISCAHNLRETTNLATAHAEILAINEACKKL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-ATCHHS 125 L E LYVTLEPC MC+ AI +RI+++ +GA + + T Y +H Sbjct: 67 ESWYLDECTLYVTLEPCVMCSGAIINSRIKKVVFGAFENRWLAL---TSIYNCNFPVNHR 123 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PEI GI + +II+++FK +R Sbjct: 124 PEIVTGILGDKCSKIIKEYFKIKR 147 >gi|168217743|ref|ZP_02643368.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens NCTC 8239] gi|182380212|gb|EDT77691.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens NCTC 8239] Length = 143 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 84/143 (58%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +S ALEEA+ A + E+PVGAV V N +II+RA N LKD TAHAEILAIR C L Sbjct: 1 MLSLALEEAEKAREKGEVPVGAVIVKNGEIIARAHNLKETLKDPTAHAEILAIREACNKL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L ++YVTLEPC MCA AI +R+ ++Y G + G + ++ Sbjct: 61 NNWRLNGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ ++++ +I+ FFK+RR Sbjct: 121 EVVWE-NDEKCSKILTKFFKDRR 142 >gi|168206176|ref|ZP_02632181.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens E str. JGS1987] gi|170662306|gb|EDT14989.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens E str. JGS1987] Length = 143 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 84/143 (58%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +S ALEEA+ A + E+PVGAV V N +II+RA N LKD TAHAEILAIR C L Sbjct: 1 MLSLALEEAEKAREKGEVPVGAVIVKNGEIIARAHNLKETLKDPTAHAEILAIREACNKL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L ++YVTLEPC MCA AI +R+ ++Y G + G + ++ Sbjct: 61 NNWRLHGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ ++++ +I+ FFK+RR Sbjct: 121 EVVWE-NDEKCSKILTKFFKDRR 142 >gi|154684537|ref|YP_001419698.1| YaaJ [Bacillus amyloliquefaciens FZB42] gi|154350388|gb|ABS72467.1| YaaJ [Bacillus amyloliquefaciens FZB42] Length = 160 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A++EA+ A + E+P+GAV VL+++I++RA N + AHAE+LAI CR L Sbjct: 6 YMREAIKEAKKAEAKGEVPIGAVLVLHDEIVARAHNLRETEQRSLAHAEMLAIDEACRKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG +H Sbjct: 66 GTWRLEDAVLYVTLEPCPMCAGAVVLSRVDKVVFGAFDPKGGCTGTLMNLLQEERFNHQA 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + +++ FF++ R Sbjct: 126 EVVSGVLGEECGEMLSAFFRKLR 148 >gi|304398612|ref|ZP_07380484.1| CMP/dCMP deaminase zinc-binding [Pantoea sp. aB] gi|304353823|gb|EFM18198.1| CMP/dCMP deaminase zinc-binding [Pantoea sp. aB] Length = 155 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 57/142 (40%), Positives = 81/142 (57%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ A ++E+PVGAV V N+++I NR D TAHAEI+A+R G ++L Sbjct: 1 MRHALGLARRAWEQSEVPVGAVLVQNDQVIGEGWNRPIGQHDPTAHAEIMALRQGGKVLE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +RI RL YGA + K G + +H E Sbjct: 61 NYRLLDTTLYVTLEPCVMCAGAMVHSRITRLVYGAHDVKSGAAGSLLDVLGHPGMNHQIE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 ++ G+ + ++ DFF+ RR Sbjct: 121 LHSGVLAEECAAMLSDFFRMRR 142 >gi|257899803|ref|ZP_05679456.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com15] gi|293571142|ref|ZP_06682180.1| tRNA-specific adenosine deaminase [Enterococcus faecium E980] gi|257837715|gb|EEV62789.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com15] gi|291608755|gb|EFF38039.1| tRNA-specific adenosine deaminase [Enterococcus faecium E980] Length = 165 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 52/139 (37%), Positives = 76/139 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA+ A + +E+P+GAV VL ++I + N +D T HAE+LAI+ C + Sbjct: 14 WMRLALAEAKKAEVLHEVPIGAVVVLEGEVIGKGYNLRETTQDATTHAEMLAIKEACEKV 73 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L+VTLEPC MC+ A+ L+R+ +Y+GA +PKGG +H Sbjct: 74 GSWRLENASLFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERFNHQA 133 Query: 127 EIYPGISEQRSRQIIQDFF 145 + GI E I+ DFF Sbjct: 134 YVEGGILEDECGMILTDFF 152 >gi|253996102|ref|YP_003048166.1| CMP/dCMP deaminase zinc-binding [Methylotenera mobilis JLW8] gi|253982781|gb|ACT47639.1| CMP/dCMP deaminase zinc-binding [Methylotenera mobilis JLW8] Length = 165 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/148 (39%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM+ AL A+ AAL E+PVGA+ V + II R N L D +AHAEI A+R Sbjct: 10 EQDQAFMNIALTLAKQAALAGEVPVGAIVVKDGVIIGRGSNAPITLHDPSAHAEIQAMRD 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L + LYVTLEPC MCA AI ARI +L YGAS+ K G + Sbjct: 70 AAQHLGNYRLVDCTLYVTLEPCAMCAGAIQHARIAKLVYGASDQKTGACGSVVNLMAEQK 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ FF ERR Sbjct: 130 LNHHTTVASGLLADECGMMLSSFFSERR 157 >gi|227894597|ref|ZP_04012402.1| nucleoside deaminase [Lactobacillus ultunensis DSM 16047] gi|227863588|gb|EEJ71009.1| nucleoside deaminase [Lactobacillus ultunensis DSM 16047] Length = 174 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 52/141 (36%), Positives = 84/141 (59%), Gaps = 1/141 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+++A+ A + E+P+GAV V + K+I NR +D T HAE++AI+ C+ Sbjct: 15 YMQLAMDQAKIAEQQGEVPIGAVIVDPDGKVIGTGYNRRELDEDSTQHAEMIAIKEACKN 74 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + +T+ +H Sbjct: 75 LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFTVDKFNHH 134 Query: 126 PEIYPGISEQRSRQIIQDFFK 146 P G+ + Q+++DFF+ Sbjct: 135 PRAIRGLYRDQCAQMLKDFFR 155 >gi|197124086|ref|YP_002136037.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter sp. K] gi|196173935|gb|ACG74908.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter sp. K] Length = 183 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 57/138 (41%), Positives = 79/138 (57%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ AA R E+PVGAVA+ +++ R N +D TAHAE+LAI+ R L Sbjct: 30 MQEALGLAREAAARGEVPVGAVALFEGRVVGRGANAREAARDPTAHAELLAIQEAARTLG 89 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L V + VTLEPC MCA A+ LARI RL YGAS+PK G + +H Sbjct: 90 RWRLTGVTVVVTLEPCAMCAGAMVLARIDRLVYGASDPKAGCTGSLQDLSADPRLNHRFP 149 Query: 128 IYPGISEQRSRQIIQDFF 145 + G+ + S ++++ FF Sbjct: 150 VERGLLAEESGELLRAFF 167 >gi|328952357|ref|YP_004369691.1| CMP/dCMP deaminase zinc-binding protein [Desulfobacca acetoxidans DSM 11109] gi|328452681|gb|AEB08510.1| CMP/dCMP deaminase zinc-binding protein [Desulfobacca acetoxidans DSM 11109] Length = 167 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 82/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+ EA+ A+ E+PVGAV + KII + N+ D +AHAEI+A+R Sbjct: 23 YMCLAIGEAKKASSLQEVPVGAVVIDKAGKIIGQGHNQPIASHDPSAHAEIVALRQASAC 82 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 LP+ +YVTLEPC MC A+ AR+RRL YGA +PKGG + + +H Sbjct: 83 SRNYRLPDCTMYVTLEPCIMCIGAVLQARLRRLVYGADDPKGGACVSLYRLPEDTRLNHR 142 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E R ++Q+FF+ RR Sbjct: 143 LEVVRGVCEAECRTLLQEFFRRRR 166 >gi|227552392|ref|ZP_03982441.1| nucleoside deaminase [Enterococcus faecium TX1330] gi|257888367|ref|ZP_05668020.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,141,733] gi|257896743|ref|ZP_05676396.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com12] gi|293378075|ref|ZP_06624251.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium PC4.1] gi|227178480|gb|EEI59452.1| nucleoside deaminase [Enterococcus faecium TX1330] gi|257824421|gb|EEV51353.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,141,733] gi|257833308|gb|EEV59729.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com12] gi|292643330|gb|EFF61464.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium PC4.1] Length = 171 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 77/139 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA+ A + +E+P+GAV VL ++I + N +D T HAE+LAI+ C + Sbjct: 14 WMRLALAEAKKAEVLHEVPIGAVVVLEGEVIGKGYNLRETTQDATTHAEMLAIKEACEKV 73 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L+VTLEPC MC+ A+ L+R+ +Y+GA +PKGG +H Sbjct: 74 GSWRLENASLFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERFNHQA 133 Query: 127 EIYPGISEQRSRQIIQDFF 145 + GI E +++ DFF Sbjct: 134 YVEGGILEDECGRVLTDFF 152 >gi|227431250|ref|ZP_03913304.1| tRNA-adenosine deaminase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227353012|gb|EEJ43184.1| tRNA-adenosine deaminase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 168 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 80/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL EA+ A E+P+GAV V N++I+RA N + TAHAE+LAI Sbjct: 13 DYFMQEALNEAKIAQSEGEVPIGAVIVYENQMIARAHNHREADQLATAHAELLAIESANT 72 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L L+VTLEPC MCA AI ARI +YYGA++PKGG + +H Sbjct: 73 KLKSWRLENTALFVTLEPCIMCAGAIINARIPVVYYGANDPKGGATRSLYSLLEDNRLNH 132 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++Y GI + S ++Q FF R Sbjct: 133 MVKVYEGIRGEESGLLLQRFFSNIR 157 >gi|238917935|ref|YP_002931452.1| hypothetical protein EUBELI_02023 [Eubacterium eligens ATCC 27750] gi|238873295|gb|ACR73005.1| Hypothetical protein EUBELI_02023 [Eubacterium eligens ATCC 27750] Length = 176 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ +A+ A NE+P+G V V K+I R NR K HAEI AI+ R + Sbjct: 20 YMKQAITQAKKAYKLNEVPIGCVIVYEGKVIGRGYNRRNTDKTSLGHAEITAIKKASRYM 79 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVTLEPC MCA AI ARI R+ G+ NPK G + + T +H Sbjct: 80 NDWRLENCTLYVTLEPCQMCAGAIVQARIPRVVIGSMNPKAGCAGSILNILQIPTFNHQC 139 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ E+ +++ FFKE R Sbjct: 140 EITKGVCEEECSEMLTTFFKELR 162 >gi|313889859|ref|ZP_07823501.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus pseudoporcinus SPIN 20026] gi|313121904|gb|EFR45001.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus pseudoporcinus SPIN 20026] Length = 174 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ + ++ EIP+G V V + KII R N EL HAEI+AI Sbjct: 12 FMREALKEAEKSLVKAEIPIGCVIVKDGKIIGRGHNAREELNQAIMHAEIMAINEANAHE 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E L+VT+EPC MC+ AI LARI + +GA N K GG + Q T +H Sbjct: 72 KNWRLLETSLFVTIEPCVMCSGAIGLARIPHVVFGAPNQKFGGAGSLYQILTDQRLNHRV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E +++QDFF++ R Sbjct: 132 ELESGLLEAECAKMMQDFFRQGR 154 >gi|294084707|ref|YP_003551465.1| CMP/dCMP deaminase, zinc-binding protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664280|gb|ADE39381.1| CMP/dCMP deaminase, zinc-binding protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 149 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 53/128 (41%), Positives = 77/128 (60%), Gaps = 3/128 (2%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTA--HAEILAIRMGCRILSQEILPEVDLYVTLE 81 +PV A V + + A NR ++D A HAEILAI L DL+VTLE Sbjct: 23 VPVAAAIVAPDGTVV-ALESNRMVRDGNALHHAEILAINAALAKTGGSRLDGYDLWVTLE 81 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI+ AR+RR+Y+ A + K G +E+G +++ +C+H PE+Y G+SEQ + ++ Sbjct: 82 PCAMCAGAIAHARLRRVYFAAYDAKAGAVESGIRYFDHPSCNHRPEVYGGLSEQAASIML 141 Query: 142 QDFFKERR 149 DFF +R Sbjct: 142 SDFFAAKR 149 >gi|319891528|ref|YP_004148403.1| tRNA-specific adenosine-34 deaminase [Staphylococcus pseudintermedius HKU10-03] gi|317161224|gb|ADV04767.1| tRNA-specific adenosine-34 deaminase [Staphylococcus pseudintermedius HKU10-03] Length = 157 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +MS ALEEA+ AA + E+P+GAV V N KII+RA N + TAHAE LA+ Sbjct: 1 MTSHQYYMSIALEEAKKAAKKGEVPIGAVVVKNGKIIARAHNLRETDQSPTAHAEHLAME 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L LYVTLEPC MCA I ++R+ + +GA +PKGG + + + Sbjct: 61 RAAAQLGTWRLEGCTLYVTLEPCVMCAGTIVMSRVDTVVFGAMDPKGGCVGSLMNLVQDS 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ +I++ FF+ R Sbjct: 121 RMNHRASVVSGVLAYSCGEILRQFFRALR 149 >gi|291562950|emb|CBL41766.1| Cytosine/adenosine deaminases [butyrate-producing bacterium SS3/4] Length = 186 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ +A+ AA E+P+G V V + +II+R NR K+V AHAEI+A+R CRIL Sbjct: 16 YMKEAIRQAKKAAALKEVPIGCVIVYDGRIIARGYNRRTVDKNVLAHAEIIAMRRACRIL 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +YVTLEPC MCA AI ARI ++ G NPK G + +H Sbjct: 76 GDWRLEGCTMYVTLEPCPMCAGAIVQARIPKVVIGCMNPKAGCAGSVLDMLHEDGFNHQV 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E G+ Q+++DFFK R Sbjct: 136 ETEVGLLGDECSQMLKDFFKALR 158 >gi|291532344|emb|CBL05457.1| tRNA-adenosine deaminase [Megamonas hypermegale ART12/1] Length = 159 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/144 (40%), Positives = 84/144 (58%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL EA+ A EIP+GA+ + ++K IISR N + D TAHAEI+AIR C Sbjct: 13 MKEALIEAKKAFAIGEIPIGAI-ICDDKGNIISRGHNLREKTFDATAHAEIVAIRKACTK 71 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L ++ LYVT+EPC MCA AI +R++RL YGA++ + GG E+ +H Sbjct: 72 LQNWRLSDLTLYVTVEPCPMCAGAIFSSRLKRLVYGATDWRAGGCESVFNIVNNHWLNHQ 131 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 +I G+ E +++ FF+ RR Sbjct: 132 TQIRAGVLEDECSLLVKKFFQTRR 155 >gi|315173580|gb|EFU17597.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX1346] Length = 173 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA+ A +E+P+GAV V +II R N ++ TAHAE+ AI+ CR + Sbjct: 16 FMREAIAEAKKAEGLDEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACRGI 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E L+VTLEPC MC+ A+ LARI +YYGA++PK G +H Sbjct: 76 ENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVA 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R ++ FFK+ R Sbjct: 136 YVEAGVLEEECRLLLVQFFKKLR 158 >gi|149908700|ref|ZP_01897361.1| putative zinc-binding protein [Moritella sp. PE36] gi|149808242|gb|EDM68181.1| putative zinc-binding protein [Moritella sp. PE36] Length = 182 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A A +E+PVGAV VLN+KII N++ D TAHAEI+A+R + + Sbjct: 28 WMQHAIMLAGKAEAIDEVPVGAVIVLNDKIIGEGWNQSIISHDATAHAEIMALREAGKTV 87 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC+MCA A+ +R++RL YGA + K G + A +H Sbjct: 88 ENYRLIDATLYVTLEPCSMCAGAMVHSRVKRLVYGAVDLKTGAAGSVFNLVEHAQLNHQI 147 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + ++ FFK RR Sbjct: 148 EVRSGVFASETGALLSQFFKRRR 170 >gi|227824625|ref|ZP_03989457.1| CMP/dCMP deaminase [Acidaminococcus sp. D21] gi|226905124|gb|EEH91042.1| CMP/dCMP deaminase [Acidaminococcus sp. D21] Length = 153 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 56/127 (44%), Positives = 75/127 (59%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 EIPVGA+ V + ++I+R NR D TAHAEIL IR C L + L + LYVT+EP Sbjct: 27 EIPVGAILVQDGRVIARNHNRRERAHDATAHAEILVIREACEKLRRWRLADSTLYVTMEP 86 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCA AI ARI R+ +GAS+ G + Q + H + I GI +R ++I+Q Sbjct: 87 CPMCAGAIYNARIGRVVFGASDSVAGACGSLFQIPLHPSLHANTIIKAGIEAERCKKILQ 146 Query: 143 DFFKERR 149 +FF RR Sbjct: 147 EFFTRRR 153 >gi|206578910|ref|YP_002237098.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae 342] gi|206567968|gb|ACI09744.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae 342] Length = 180 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G +L Sbjct: 22 WMRHALTLAKRAWKEGEVPVGAVLVYNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI RL +GA + K G + +H Sbjct: 82 QNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLIDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + ++ DFF+ RR Sbjct: 142 EISEGVLAESCSTMLSDFFRWRR 164 >gi|197294746|ref|YP_001799287.1| Cytidine/deoxycytidylate deaminase family protein [Candidatus Phytoplasma australiense] gi|171854073|emb|CAM12046.1| Cytidine/deoxycytidylate deaminase family protein [Candidatus Phytoplasma australiense] Length = 166 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 57/147 (38%), Positives = 82/147 (55%), Gaps = 1/147 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K FM A +EA A L+ E+PVGAV VLNN+II+RA N ++ HAE LA+ Sbjct: 6 KNLFFMKAAFQEAYKAYLKKEVPVGAVVVLNNQIIARAHNNRKQKNLFFGHAEFLALIKA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L +YVTLEPC MCA A+ A ++ +YYGA++ K G I++ + L Sbjct: 66 NKKLKNRRLTNSSVYVTLEPCLMCAGALIQAGVKHVYYGAADSKTGCIKSLLTSFELPLP 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G Q S +++ FF++ R Sbjct: 126 HKVIA-HSGFLAQESSDLLKTFFQQLR 151 >gi|218961251|ref|YP_001741026.1| Cytosine/adenosine deaminase [Candidatus Cloacamonas acidaminovorans] gi|167729908|emb|CAO80820.1| Cytosine/adenosine deaminase [Candidatus Cloacamonas acidaminovorans] Length = 155 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 59/146 (40%), Positives = 86/146 (58%), Gaps = 5/146 (3%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FM A+ EA+ A +EIPVGA+ V NN II + NR+R+L + AH E L I +I Sbjct: 11 LFMQEAIAEAKKAFTEDEIPVGALLVKNNTIILKEHNRSRQLANPLAHCEKLLID---KI 67 Query: 66 LSQE--ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L+ E L + LYVTLEPC MCA I L++I + YGA +PK G + + + + Sbjct: 68 LTSEPGFLYDYTLYVTLEPCLMCAGMIILSKIGTVVYGAKDPKAGVVGSLYNVLNDKSFN 127 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H P + GI EQ ++++FF ++R Sbjct: 128 HHPVVIGGILEQECAFLLEEFFHKKR 153 >gi|124266938|ref|YP_001020942.1| tRNA-adenosine deaminase [Methylibium petroleiphilum PM1] gi|124259713|gb|ABM94707.1| tRNA-adenosine deaminase [Methylibium petroleiphilum PM1] Length = 205 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 4/148 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN----NKIISRAGNRNRELKDVTAHAEIL 57 +K M AL++AQNA L E+PVGAV V +++++ NR D TAHAEI+ Sbjct: 9 RKDEAAMRLALDQAQNAWLVGEVPVGAVIVREVDGVHQVVATGYNRPITTHDPTAHAEIV 68 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 A+R ++L LP+ +LYVTLEPC MCA A+ AR +R+ Y A++PK G + + Sbjct: 69 ALRHAAQLLGNYRLPDCELYVTLEPCAMCAMALVHARFKRVVYAAADPKTGAAGSVIDLF 128 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 +H + G+ Q++++FF Sbjct: 129 AQRQLNHHTAVQGGVLADTCGQLLREFF 156 >gi|126697581|ref|YP_001086478.1| putative cytosine/adenosine deaminase [Clostridium difficile 630] gi|254973665|ref|ZP_05270137.1| putative cytosine/adenosine deaminase [Clostridium difficile QCD-66c26] gi|255091056|ref|ZP_05320534.1| putative cytosine/adenosine deaminase [Clostridium difficile CIP 107932] gi|255099172|ref|ZP_05328149.1| putative cytosine/adenosine deaminase [Clostridium difficile QCD-63q42] gi|255312710|ref|ZP_05354293.1| putative cytosine/adenosine deaminase [Clostridium difficile QCD-76w55] gi|255515470|ref|ZP_05383146.1| putative cytosine/adenosine deaminase [Clostridium difficile QCD-97b34] gi|255648562|ref|ZP_05395464.1| putative cytosine/adenosine deaminase [Clostridium difficile QCD-37x79] gi|255654097|ref|ZP_05399506.1| putative cytosine/adenosine deaminase [Clostridium difficile QCD-23m63] gi|260681784|ref|YP_003213069.1| putative cytosine/adenosine deaminase [Clostridium difficile CD196] gi|260685381|ref|YP_003216514.1| putative cytosine/adenosine deaminase [Clostridium difficile R20291] gi|296452478|ref|ZP_06894177.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP08] gi|296878246|ref|ZP_06902256.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP07] gi|306518691|ref|ZP_07405038.1| putative cytosine/adenosine deaminase [Clostridium difficile QCD-32g58] gi|115249018|emb|CAJ66829.1| transfer RNA specific adenosine deaminase [Clostridium difficile] gi|260207947|emb|CBA60067.1| putative cytosine/adenosine deaminase [Clostridium difficile CD196] gi|260211397|emb|CBE01470.1| putative cytosine/adenosine deaminase [Clostridium difficile R20291] gi|296258684|gb|EFH05580.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP08] gi|296430754|gb|EFH16591.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP07] Length = 151 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 57/147 (38%), Positives = 86/147 (58%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + + +M AL+EA A + E P+GA+ V +N+II+RA N LKD TAHAEILAI+ Sbjct: 2 ESSFYMKEALKEAYKAYNKKETPIGAIIVKDNQIIARAHNLTETLKDSTAHAEILAIKQA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L + DLYVT+EPC MC+ AI +RI++L G + K IE +F Sbjct: 62 SEKLGGWRLTDCDLYVTMEPCIMCSGAIVNSRIKKLIIGTRHVKNSYIEKQHEFKLDYFN 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +++ ++ + ++ I+Q+FFK R Sbjct: 122 NNNVKVAFDVLQEECSIILQEFFKALR 148 >gi|323465305|gb|ADX77458.1| tRNA-specific adenosine deaminase [Staphylococcus pseudintermedius ED99] Length = 157 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +MS ALEEA+ AA + E+P+GAV V N KII+RA N + TAHAE LA+ Sbjct: 1 MTSHQYYMSIALEEARKAAKKGEVPIGAVVVKNGKIIARAHNLRETDQSPTAHAEHLAME 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L LYVTLEPC MCA I ++R+ + +GA +PKGG + + + Sbjct: 61 RAAAQLGTWRLEGCTLYVTLEPCVMCAGTIVMSRVDTVVFGAMDPKGGCVGSLMNLVQDS 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ +I++ FF+ R Sbjct: 121 RMNHRASVVSGVLAYSCGEILRQFFRALR 149 >gi|56459694|ref|YP_154975.1| cytosine/adenosine deaminase putative [Idiomarina loihiensis L2TR] gi|56178704|gb|AAV81426.1| Cytosine/adenosine deaminase putative [Idiomarina loihiensis L2TR] Length = 150 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 82/142 (57%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALE A+ A +E+PVGAV V+++KI+ N+ L D +AHAE AIR + + Sbjct: 1 MQRALELAEQAQNADEVPVGAVLVMDDKIVGEGYNQVISLSDPSAHAEAQAIRSAGQAID 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L LYVTLEPC MCA I+ AR++RL +GA++P+ G + A+ +H + Sbjct: 61 NYRLVNATLYVTLEPCAMCAGLITHARVKRLVFGATDPRTGATGTAIEVINHASMNHKVD 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ + I++ FF+ RR Sbjct: 121 VESGVLAEECGDILRRFFRARR 142 >gi|145632283|ref|ZP_01788018.1| hypothetical protein CGSHi3655_07509 [Haemophilus influenzae 3655] gi|145634073|ref|ZP_01789784.1| hypothetical protein CGSHiAA_08515 [Haemophilus influenzae PittAA] gi|229844039|ref|ZP_04464180.1| hypothetical protein CGSHi6P18H1_06366 [Haemophilus influenzae 6P18H1] gi|144987190|gb|EDJ93720.1| hypothetical protein CGSHi3655_07509 [Haemophilus influenzae 3655] gi|145268517|gb|EDK08510.1| hypothetical protein CGSHiAA_08515 [Haemophilus influenzae PittAA] gi|229813033|gb|EEP48721.1| hypothetical protein CGSHi6P18H1_06366 [Haemophilus influenzae 6P18H1] Length = 173 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A A EIPVGAV V + + II N + D TAHAEI+A+R G + + Sbjct: 15 MRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMCA AI +RI+RL +GAS+ K G I + F+ +H+ Sbjct: 75 QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFNDYKMNHTL 134 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q + FF++RR Sbjct: 135 EITSGVLAEECSQKLSTFFQKRR 157 >gi|256961376|ref|ZP_05565547.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Merz96] gi|293383665|ref|ZP_06629574.1| tRNA-specific adenosine deaminase [Enterococcus faecalis R712] gi|293387223|ref|ZP_06631781.1| tRNA-specific adenosine deaminase [Enterococcus faecalis S613] gi|312906213|ref|ZP_07765225.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis DAPTO 512] gi|312909559|ref|ZP_07768414.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis DAPTO 516] gi|256951872|gb|EEU68504.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Merz96] gi|291079001|gb|EFE16365.1| tRNA-specific adenosine deaminase [Enterococcus faecalis R712] gi|291083361|gb|EFE20324.1| tRNA-specific adenosine deaminase [Enterococcus faecalis S613] gi|310627859|gb|EFQ11142.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis DAPTO 512] gi|311290232|gb|EFQ68788.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis DAPTO 516] Length = 173 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 80/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +FM A+ EA+ A E+P+GAV V +II R N ++ TAHAE+ AI+ CR Sbjct: 14 EIFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACR 73 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L E L+VTLEPC MC+ A+ LARI +YYGA++PK G +H Sbjct: 74 GIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNH 133 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R ++ FFK+ R Sbjct: 134 VAYVEAGVLEEECRLLLVQFFKKLR 158 >gi|153834810|ref|ZP_01987477.1| tRNA-specific adenosine deaminase [Vibrio harveyi HY01] gi|148868738|gb|EDL67812.1| tRNA-specific adenosine deaminase [Vibrio harveyi HY01] Length = 177 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +FM A+E A+ A E+PVGAV V + +II+ NR+ D TAHAEI +R Sbjct: 9 QDELFMRRAMELAEQAEAEGEVPVGAVLVKDGEIIAEGWNRSICAHDATAHAEIQTLRKA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + LYVTLEPC MCA A+ +R++R+ YGA + K G + Sbjct: 69 GKALGNYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVYGAPDLKAGAAGTVLNLFESQAA 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R +Q FFK RR Sbjct: 129 YHYATVENGLLEEECRSQLQAFFKRRR 155 >gi|68249492|ref|YP_248604.1| hypothetical protein NTHI1073 [Haemophilus influenzae 86-028NP] gi|145636963|ref|ZP_01792627.1| preprotein translocase subunit SecA [Haemophilus influenzae PittHH] gi|145638273|ref|ZP_01793883.1| preprotein translocase subunit SecA [Haemophilus influenzae PittII] gi|68057691|gb|AAX87944.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP] gi|145269821|gb|EDK09760.1| preprotein translocase subunit SecA [Haemophilus influenzae PittHH] gi|145272602|gb|EDK12509.1| preprotein translocase subunit SecA [Haemophilus influenzae PittII] gi|309751427|gb|ADO81411.1| tRNA-specific adenosine deaminase [Haemophilus influenzae R2866] gi|309973597|gb|ADO96798.1| tRNA-specific adenosine deaminase [Haemophilus influenzae R2846] Length = 173 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A A EIPVGAV V + + II N + D TAHAEI+A+R G + + Sbjct: 15 MRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMCA AI +RI+RL +GAS+ K G I + F+ +H+ Sbjct: 75 QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 134 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q + FF++RR Sbjct: 135 EITSGVLAEECSQKLSTFFQKRR 157 >gi|290508256|ref|ZP_06547627.1| tRNA-specific adenosine deaminase yfhC [Klebsiella sp. 1_1_55] gi|289777650|gb|EFD85647.1| tRNA-specific adenosine deaminase yfhC [Klebsiella sp. 1_1_55] Length = 180 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G +L Sbjct: 22 WMRHALTLAKRAWEEGEVPVGAVLVYNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI RL +GA + K G + +H Sbjct: 82 QNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLIDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + ++ DFF+ RR Sbjct: 142 EISEGVLAESCSTMLSDFFRWRR 164 >gi|226952955|ref|ZP_03823419.1| deaminase [Acinetobacter sp. ATCC 27244] gi|294650537|ref|ZP_06727894.1| cytosine deaminase [Acinetobacter haemolyticus ATCC 19194] gi|226836276|gb|EEH68659.1| deaminase [Acinetobacter sp. ATCC 27244] gi|292823534|gb|EFF82380.1| cytosine deaminase [Acinetobacter haemolyticus ATCC 19194] Length = 174 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 60/144 (41%), Positives = 79/144 (54%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A E+A AA + EIPVGAV V +KII N L D +AHAEI A+RM C+ + Sbjct: 16 WMQFAYEQAALAAEQGEIPVGAVIVSQSKIIGAGYNAPILLSDPSAHAEIQALRMACQSI 75 Query: 67 SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 LPE LYVTLEPCTMC A+ ARI+R+ + PK G + + Q +H Sbjct: 76 QNYRLPEDATLYVTLEPCTMCVGALIHARIQRVVFATPEPKAGSLVSARQLLDSGYYNHK 135 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 G + + + DFFK+RR Sbjct: 136 FVFEHGCMQAKCSAQLSDFFKQRR 159 >gi|260581733|ref|ZP_05849530.1| ComE operon protein 2 [Haemophilus influenzae NT127] gi|319897607|ref|YP_004135804.1| tRNA-specific adenosine deaminase [Haemophilus influenzae F3031] gi|260095326|gb|EEW79217.1| ComE operon protein 2 [Haemophilus influenzae NT127] gi|317433113|emb|CBY81487.1| tRNA-specific adenosine deaminase [Haemophilus influenzae F3031] Length = 173 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A A EIPVGAV V + + II N + D TAHAEI+A+R G + + Sbjct: 15 MRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMCA AI +RI+RL +GAS+ K G I + F+ +H+ Sbjct: 75 QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 134 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q + FF++RR Sbjct: 135 EITSGVLAEECSQKLSTFFQKRR 157 >gi|78224707|ref|YP_386454.1| tRNA-adenosine deaminase [Geobacter metallireducens GS-15] gi|78195962|gb|ABB33729.1| tRNA-adenosine deaminase [Geobacter metallireducens GS-15] Length = 171 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ + +M AL EA+ AA R+E+P+GAV V N +I R N +D +AHAE++AIR Sbjct: 9 VRDDSYWMGKALREAEKAAARDEVPIGAVVVRNGAVIGRGHNLRENKQDPSAHAEMIAIR 68 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R L L LYVTLEPC MC AI LAR R+ +G +PKGG + Sbjct: 69 QAARRLGCWRLTGCVLYVTLEPCLMCMGAIILARFDRVVFGCHDPKGGAAGSLYDLSDDR 128 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ + E+ I+ FF + R Sbjct: 129 RLNHRVELTSRVREEECSAILSGFFADLR 157 >gi|46446282|ref|YP_007647.1| hypothetical protein pc0648 [Candidatus Protochlamydia amoebophila UWE25] gi|46399923|emb|CAF23372.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 166 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 4/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA A +E+PVGAV V + II+R N+ LKD TAHAE+L + G L Sbjct: 16 FMLEALKEAWKAFKADEVPVGAVLVKDKHIIARGFNQVEMLKDATAHAEMLCLTAGESAL 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH--H 124 L E LY T+EPC+MCA A+ L RI+ L +GA + + G NG+ H H Sbjct: 76 DNWRLSETTLYCTVEPCSMCAGAMFLTRIKTLVWGAPDLRHGA--NGSWVNLFDEIHPTH 133 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + EI + + QI++DFF+ +R Sbjct: 134 AIEIRKHVLQNPCAQILKDFFQLQR 158 >gi|291287100|ref|YP_003503916.1| CMP/dCMP deaminase zinc-binding protein [Denitrovibrio acetiphilus DSM 12809] gi|290884260|gb|ADD67960.1| CMP/dCMP deaminase zinc-binding protein [Denitrovibrio acetiphilus DSM 12809] Length = 158 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A++EA+ AA + E+P+GAV V +I R N+ K HAEI+AI + Sbjct: 11 FMNEAVKEAEGAAAKGEVPIGAVVVSEGAVIGRGSNKKNSGKSALNHAEIIAIEDASSKI 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LYVTLEPC MCA AI ARIR + +G + PK GG+ + + + + +H Sbjct: 71 GDWRLDECTLYVTLEPCLMCAGAIIHARIRNVIFGTTEPKFGGVISLARTFDIDGLNHKV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ +++ FFKE R Sbjct: 131 SYKGGLHSDEISAMMKQFFKEVR 153 >gi|254425304|ref|ZP_05039022.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Synechococcus sp. PCC 7335] gi|196192793|gb|EDX87757.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Synechococcus sp. PCC 7335] Length = 162 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 56/136 (41%), Positives = 79/136 (58%), Gaps = 1/136 (0%) Query: 15 AQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73 AQ A E+PV A+ V +N++++ A NR +D TAHAE+LAIR + L L + Sbjct: 8 AQEAGTAGEVPVAAIIVGPDNQLVASAANRKERDQDPTAHAEVLAIRAAAKHLGDWHLNQ 67 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGIS 133 LYVTLEPC MCA AI AR+ L YG S+PK G I + + +H + G+ Sbjct: 68 CTLYVTLEPCPMCAGAIIHARLGLLVYGTSDPKTGAIRSVLNLPDGPSSNHKLVVIGGVL 127 Query: 134 EQRSRQIIQDFFKERR 149 E +Q +QD+FK++R Sbjct: 128 ETVCKQQLQDWFKQKR 143 >gi|270264772|ref|ZP_06193037.1| hypothetical protein SOD_i01890 [Serratia odorifera 4Rx13] gi|270041455|gb|EFA14554.1| hypothetical protein SOD_i01890 [Serratia odorifera 4Rx13] Length = 168 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL AQ A E+PVGA+ VL+N++I NR D TAHAEI+A+R G +L Sbjct: 9 WMRQALLLAQRAQEEGEVPVGALLVLDNQVIGEGWNRPIGRHDPTAHAEIMALRQGGAVL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA A+ +RIRRL YGA++ K G + +H Sbjct: 69 QNYRLLNATLYVTLEPCVMCAGAMVHSRIRRLVYGAADVKTGAAGSLVDILRHPGMNHQV 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + +FF+ RR Sbjct: 129 EIASGVLADECAATLSNFFRLRR 151 >gi|253731164|ref|ZP_04865329.1| deaminase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253725129|gb|EES93858.1| deaminase [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 156 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A++EA+ AA E+P+GA+ ++++I+RA N L+ TAHAE +AI ++L Sbjct: 7 FMTLAIKEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA I ++RI R+ YGA +PKGG + + +H Sbjct: 67 GSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRA 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ ++ FFK R Sbjct: 127 IVDKGVLKEACSTLLTTFFKNLR 149 >gi|170078671|ref|YP_001735309.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Synechococcus sp. PCC 7002] gi|169886340|gb|ACB00054.1| Cytidine and deoxycytidylate deaminase zinc-binding protein [Synechococcus sp. PCC 7002] Length = 158 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+ A+ A EIPVGAV V N+ ++++GNR + +D TAHAE+L IR ++ Sbjct: 13 WMQKAIALAKVAGQSGEIPVGAVIVDGKNQCLAQSGNRKEKTQDPTAHAEMLVIRAASQM 72 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + LYVTLEPC MCA A+ +R++++ YGA +PK G + + F +HS Sbjct: 73 RQDWHLQDCTLYVTLEPCPMCAGAMIHSRLKQVVYGADDPKTGALRSMANFPDAPFSNHS 132 Query: 126 PEIYPGISEQRSRQIIQDFFKE 147 + GI+ RQ++Q++F+ Sbjct: 133 FPVLGGIAAMECRQLLQNWFQH 154 >gi|56418551|ref|YP_145869.1| hypothetical protein GK0016 [Geobacillus kaustophilus HTA426] gi|261417515|ref|YP_003251197.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y412MC61] gi|297528391|ref|YP_003669666.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. C56-T3] gi|319765173|ref|YP_004130674.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y412MC52] gi|56378393|dbj|BAD74301.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] gi|261373972|gb|ACX76715.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y412MC61] gi|297251643|gb|ADI25089.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. C56-T3] gi|317110039|gb|ADU92531.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y412MC52] Length = 165 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 56/149 (37%), Positives = 78/149 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+EEA+ A E+P+GAV V + ++I+RA N + AHAEILAI Sbjct: 1 MNTDEYYMRLAMEEAKKAEQIGEVPIGAVIVQDGRVIARAHNLRETEQRAIAHAEILAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR L LYVTLEPC MCA AI L+RI R+ +GA +PKGG + Sbjct: 61 EACRATGSWRLERATLYVTLEPCAMCAGAIVLSRIERVVFGAFDPKGGCAGTLMNLLQES 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ ++ FF+ R Sbjct: 121 RFNHQVKVVSGVLADECGSLLSQFFRRLR 149 >gi|182682990|ref|YP_001834737.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae CGSP14] gi|303255537|ref|ZP_07341594.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS455] gi|303260656|ref|ZP_07346619.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP-BS293] gi|303260820|ref|ZP_07346769.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP14-BS292] gi|303263147|ref|ZP_07349070.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS397] gi|303267493|ref|ZP_07353343.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS457] gi|303269460|ref|ZP_07355227.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS458] gi|182628324|gb|ACB89272.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae CGSP14] gi|301800992|emb|CBW33654.1| putative deaminase [Streptococcus pneumoniae INV200] gi|302597498|gb|EFL64587.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS455] gi|302637657|gb|EFL68143.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP14-BS292] gi|302638186|gb|EFL68658.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP-BS293] gi|302640994|gb|EFL71374.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS458] gi|302642968|gb|EFL73265.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS457] gi|302646920|gb|EFL77144.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS397] Length = 155 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 63/151 (41%), Positives = 85/151 (56%), Gaps = 4/151 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LS+E +D L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 65 DAN--LSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILT 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E + I+QDFF+ RR Sbjct: 123 DERLNHRVEVEIGILEDKCAAIMQDFFRNRR 153 >gi|118580679|ref|YP_901929.1| CMP/dCMP deaminase [Pelobacter propionicus DSM 2379] gi|118503389|gb|ABK99871.1| tRNA-adenosine deaminase [Pelobacter propionicus DSM 2379] Length = 181 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 55/129 (42%), Positives = 77/129 (59%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ EA A R+E+P+G V V +N+II+R N +D +AHAE++AIR R L Sbjct: 18 WMQRAIAEAGKARSRDEVPIGCVIVRDNRIIARGHNLRESSQDPSAHAEMIAIRKAARKL 77 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S L + LYVTLEPCTMC AI L+RI R+ +G +PKGG + +H Sbjct: 78 SSWRLLDTTLYVTLEPCTMCMGAIILSRIPRVVFGCLDPKGGAAGSLYDLSNDPRLNHRV 137 Query: 127 EIYPGISEQ 135 E+ PG+ E+ Sbjct: 138 ELLPGVLER 146 >gi|229845957|ref|ZP_04466069.1| hypothetical protein CGSHi7P49H1_03883 [Haemophilus influenzae 7P49H1] gi|229810961|gb|EEP46678.1| hypothetical protein CGSHi7P49H1_03883 [Haemophilus influenzae 7P49H1] Length = 159 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A A EIPVGAV V + + II N + D TAHAEI+A+R G + + Sbjct: 1 MRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMCA AI +RI+RL +GAS+ K G I + F+ +H+ Sbjct: 61 QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q + FF++RR Sbjct: 121 EITSGVLAEECSQKLSTFFQKRR 143 >gi|148826450|ref|YP_001291203.1| preprotein translocase subunit SecA [Haemophilus influenzae PittEE] gi|148716610|gb|ABQ98820.1| preprotein translocase subunit SecA [Haemophilus influenzae PittEE] Length = 161 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A A EIPVGAV V + + II N + D TAHAEI+A+R G + + Sbjct: 15 MRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMCA AI +RI+RL +GAS+ K G I + F+ +H+ Sbjct: 75 QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 134 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q + FF++RR Sbjct: 135 EITSGVLAEECSQKLSTFFQKRR 157 >gi|301169624|emb|CBW29225.1| tRNA-specific adenosine deaminase [Haemophilus influenzae 10810] Length = 173 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A A EIPVGAV V + II N + D TAHAEI+A+R G + + Sbjct: 15 MRYALELADKAEALGEIPVGAVLVDDAGNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMCA AI +RI+RL +GAS+ K G I + F+ +H+ Sbjct: 75 QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 134 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q + FF++RR Sbjct: 135 EITSGVLAEECSQKLSTFFQKRR 157 >gi|295692237|ref|YP_003600847.1| tRNA-specific adenosine deaminase [Lactobacillus crispatus ST1] gi|295030343|emb|CBL49822.1| tRNA-specific adenosine deaminase [Lactobacillus crispatus ST1] Length = 166 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRI 65 +M A+++A+ A + E+P+GAV V + + G REL +D T HAE++AI+ C Sbjct: 10 YMQLAIDQAKEAEKQGEVPIGAVVVDPDGRVVGTGYNRRELDEDATQHAEMIAIKEACSK 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + +++ +H Sbjct: 70 LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFSVEKFNHH 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P G+ + Q+++DFF+ R Sbjct: 130 PHAIRGLYRDQCAQMLKDFFRAIR 153 >gi|256844520|ref|ZP_05550006.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus 125-2-CHN] gi|256849091|ref|ZP_05554524.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus MV-1A-US] gi|262047573|ref|ZP_06020528.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus MV-3A-US] gi|312977923|ref|ZP_07789669.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus crispatus CTV-05] gi|256613598|gb|EEU18801.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus 125-2-CHN] gi|256713867|gb|EEU28855.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus MV-1A-US] gi|260572149|gb|EEX28714.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus MV-3A-US] gi|310895230|gb|EFQ44298.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus crispatus CTV-05] Length = 166 Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRI 65 +M A+++A+ A + E+P+GAV V + + G REL +D T HAE++AI+ C Sbjct: 10 YMQLAIDQAKEAEKQGEVPIGAVVVDPDGRVVGTGYNRRELDEDATQHAEMIAIKEACSK 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + +++ +H Sbjct: 70 LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFSVEKFNHH 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P G+ + Q+++DFF+ R Sbjct: 130 PHAIRGLYRDQCAQMLKDFFRAIR 153 >gi|118602884|ref|YP_904099.1| CMP/dCMP deaminase, zinc-binding [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567823|gb|ABL02628.1| CMP/dCMP deaminase, zinc-binding protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 156 Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ A+E+A+ A NE+PVGA+ + NN++IS A N+ D TAHAEI +R + L Sbjct: 11 WMTLAIEQAKQAQKVNEVPVGAILIQNNQLISSAYNQPISNNDPTAHAEIQLLRAAGKQL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPCTMC AI AR+ + +GA + K G + +HS Sbjct: 71 NNYRLYDTTLYVTLEPCTMCLGAIVHARVSYIVFGAYDQKSGVCGSCINLQNSQCFNHSI 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI + + ++Q FFK RR Sbjct: 131 NIQGGILADQCKDLLQQFFKSRR 153 >gi|307710059|ref|ZP_07646503.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK564] gi|307619039|gb|EFN98171.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK564] Length = 155 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 61/149 (40%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL EA+ A +EIP+G V V + KII R N EL+ HAEI+AI Sbjct: 5 VEEKEVFMREALREAEIALEHDEIPIGCVIVKDGKIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 65 NANLREESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 125 RLNHRVEVETGILEDECAAIMQDFFRNRR 153 >gi|145628165|ref|ZP_01783966.1| preprotein translocase subunit SecA [Haemophilus influenzae 22.1-21] gi|144979940|gb|EDJ89599.1| preprotein translocase subunit SecA [Haemophilus influenzae 22.1-21] Length = 159 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A A EIPVGAV V + II N + D TAHAEI+A+R G + + Sbjct: 1 MRYALELADKAEALGEIPVGAVLVDDAGNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMCA AI +RI+RL +GAS+ K G I + F+ +H+ Sbjct: 61 QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q + FF++RR Sbjct: 121 EITSGVLAEECSQKLSTFFQKRR 143 >gi|307152204|ref|YP_003887588.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822] gi|306982432|gb|ADN14313.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822] Length = 162 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 61/148 (41%), Positives = 80/148 (54%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +MS A+ AQ AAL ++PVGAV + ++I+ A NR +D TAHAEIL +R Sbjct: 15 KHQQWMSRAIVLAQQAALAGDVPVGAVILDREGRLIAEASNRKERDQDPTAHAEILVLRR 74 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 +IL L LYVTLEPC MC AI ARI L YG +PK G I + Sbjct: 75 ASQILKTWHLEACYLYVTLEPCPMCTGAIIQARIGLLVYGVDDPKTGTIRTVANLPDSSC 134 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E R+ +Q +F +RR Sbjct: 135 SNHRLSVLSGIMESACREQLQTWFAQRR 162 >gi|188996445|ref|YP_001930696.1| CMP/dCMP deaminase zinc-binding [Sulfurihydrogenibium sp. YO3AOP1] gi|188931512|gb|ACD66142.1| CMP/dCMP deaminase zinc-binding [Sulfurihydrogenibium sp. YO3AOP1] Length = 149 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 85/143 (59%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A++EA+ A +NE+PVGAV V + KIIS+A N+ + HAEILAI C+ L Sbjct: 7 FIDQAVKEAEKALKKNEVPVGAVIVKDGKIISKAHNQRISKNNALYHAEILAIEKSCKKL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LY TLEPC MCA A+ ARI+++ + A + KGG + + + + Sbjct: 67 KTWRLDDAVLYTTLEPCLMCAGAVMQARIKKVVFCAKDEKGGAVLSKYTVFDDKKLPFNV 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E Y I ++R +++++FFK+ R Sbjct: 127 E-YEYIPDERCSKLLKEFFKKLR 148 >gi|297566040|ref|YP_003685012.1| tRNA(Ile)-lysidine synthetase [Meiothermus silvanus DSM 9946] gi|296850489|gb|ADH63504.1| tRNA(Ile)-lysidine synthetase [Meiothermus silvanus DSM 9946] Length = 524 Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats. Identities = 52/103 (50%), Positives = 67/103 (65%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA +A R E+P+GAV V K+I++AGN+ E +D TAHAE+LAIR L Sbjct: 383 FMRLALAEAHSAGGRGEVPIGAVLVRGEKVIAKAGNQVEEFQDATAHAELLAIRAALEAL 442 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 +++LP LYVTLEPC MC A+ A++ RL YG N K G Sbjct: 443 GEKVLPGSTLYVTLEPCPMCYGAMLEAQVSRLVYGMENLKAGA 485 >gi|149176635|ref|ZP_01855247.1| cytosine deaminase [Planctomyces maris DSM 8797] gi|148844514|gb|EDL58865.1| cytosine deaminase [Planctomyces maris DSM 8797] Length = 171 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A +EA+ A +E+PVGAV V ++II+ A N+ L D TAHAE++AI L Sbjct: 24 WMRYAYDEARAAFEEDEVPVGAVIVYQDRIIAAAHNQREMLSDPTAHAEMIAITQAAESL 83 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI +R+ + YG + K G + Q + A +H Sbjct: 84 GSWRLSDCVLYVTLEPCPMCAGAIVQSRLPLVIYGTRDEKAGACHSLFQITSDARLNHQS 143 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ R I+Q+FF+ +R Sbjct: 144 TVISGVMQEECRGILQEFFRRKR 166 >gi|306828458|ref|ZP_07461653.1| tRNA-specific adenosine deaminase [Streptococcus mitis ATCC 6249] gi|304429257|gb|EFM32342.1| tRNA-specific adenosine deaminase [Streptococcus mitis ATCC 6249] Length = 155 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 63/145 (43%), Positives = 82/145 (56%), Gaps = 4/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+ A +EIP+G V V + +IISR N EL+ HAEI+AI L Sbjct: 11 FMREALREAEIALEHDEIPIGCVIVKDGEIISRGHNAREELQRAVMHAEIMAIENAN--L 68 Query: 67 SQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 S+E +D L+VT+EPC MC+ AI LARI ++ YGA N K G + T +H Sbjct: 69 SEESWRLLDCTLFVTIEPCVMCSGAIGLARIPKVVYGAKNQKFGAAGSLYDILTDERLNH 128 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ GI E I+QDFF+ RR Sbjct: 129 RVEVETGILEDECAGIMQDFFRNRR 153 >gi|15902066|ref|NP_357616.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae R6] gi|116516620|ref|YP_815440.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae D39] gi|148987738|ref|ZP_01819201.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP6-BS73] gi|15457551|gb|AAK98826.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116077196|gb|ABJ54916.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae D39] gi|147926202|gb|EDK77275.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP6-BS73] Length = 155 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 63/151 (41%), Positives = 84/151 (55%), Gaps = 4/151 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LS+E +D L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 65 DAN--LSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILT 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 123 DERLNHRVEVETGILEDECAAIMQDFFRNRR 153 >gi|67922696|ref|ZP_00516200.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Crocosphaera watsonii WH 8501] gi|67855478|gb|EAM50733.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Crocosphaera watsonii WH 8501] Length = 165 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 59/144 (40%), Positives = 81/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL Q AA ++PVGAV + + K+I++ N + D TAHAEI+AIR + Sbjct: 15 WMKQALNLGQEAAKAGDVPVGAVIIDSQGKLIAQGLNCKEQNHDPTAHAEIIAIRQATQK 74 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + LYVTLEPC MCA AI +R+ L YG +PK G I + A +H Sbjct: 75 LHSWYLNKCTLYVTLEPCIMCAGAIIHSRLGLLVYGVDDPKSGTIRSVLNLPDSAASNHR 134 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI E RQ +QD+FK++R Sbjct: 135 LSVLSGILEAECRQQLQDWFKQKR 158 >gi|237733437|ref|ZP_04563918.1| tRNA-adenosine deaminase [Mollicutes bacterium D7] gi|229383472|gb|EEO33563.1| tRNA-adenosine deaminase [Coprobacillus sp. D7] Length = 152 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 2/149 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM A +EA +E+PVGAV V + KII+ N K TAHAEI+AI Sbjct: 1 MDQDLEFMEIAYQEALKCLDMDEVPVGAVIVKDGKIIACGRNLRETSKRATAHAEIIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR L+ L E LYVTLEPC MC+ AI +RI+R+ +GA + + T + + Sbjct: 61 EACRTLNSWYLDECTLYVTLEPCVMCSGAIINSRIQRVVFGAFESRWLAL--TTIYQSDI 118 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P I G+ + ++I+D+FK +R Sbjct: 119 PVNHQPVIVSGVLGDKCSKVIKDYFKNKR 147 >gi|307243435|ref|ZP_07525591.1| putative thiamine-phosphate pyrophosphorylase [Peptostreptococcus stomatis DSM 17678] gi|306493159|gb|EFM65156.1| putative thiamine-phosphate pyrophosphorylase [Peptostreptococcus stomatis DSM 17678] Length = 391 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FMS AL+EA+ A E P+GAV V + +I+ R N+ D T HAE++AI+ + L Sbjct: 244 FMSEALKEARKAYAMKETPIGAVVVYDGQIVGRGFNQVELTGDPTQHAEMVAIQEAAKAL 303 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + +YVT+EPC MCA AI +RI+ LY GAS+ K + F Sbjct: 304 GRWRLYDCQMYVTMEPCLMCAGAIENSRIKSLYIGASHKKNHLVGKHNDFKLEVYKDRKI 363 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI E+ + +I+ DFFKERR Sbjct: 364 DYEFGILEKEASKILTDFFKERR 386 >gi|291618438|ref|YP_003521180.1| TadA [Pantoea ananatis LMG 20103] gi|291153468|gb|ADD78052.1| TadA [Pantoea ananatis LMG 20103] Length = 171 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL AQ A + E+PVGAV V +++I NR D TAHAEI+A+R G ++L Sbjct: 16 WMRRALTLAQRAWEQGEVPVGAVLVQGDRVIGEGWNRPIGQHDPTAHAEIMALRQGGKVL 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA A+ +RI RL YGA + K G + +H Sbjct: 76 ENYRLLNTTLYVTLEPCIMCAGAMVHSRIGRLVYGAHDVKTGAAGSLIDILGHPGMNHQV 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E+ ++ DFF+ RR Sbjct: 136 ALHQGVLEEECAAMLSDFFRMRR 158 >gi|75908361|ref|YP_322657.1| tRNA-adenosine deaminase [Anabaena variabilis ATCC 29413] gi|75702086|gb|ABA21762.1| tRNA-adenosine deaminase [Anabaena variabilis ATCC 29413] Length = 147 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 63/143 (44%), Positives = 79/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 MS ALE A+ A EIPVGAV + +I+ NR +D TAHAEI+A+R RIL Sbjct: 1 MSHALELAKVAGDAGEIPVGAVITDASGNLIAEGENRKERDQDPTAHAEIVALRAATRIL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LYVTLEPC MCA AI AR+ +L YG + K G I A +H Sbjct: 61 QTWRLHECTLYVTLEPCPMCAGAIIQARLGKLVYGVDDTKTGAIRTVLNIPDSAASNHRL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI E RQ +Q++F RR Sbjct: 121 QVIGGILESACRQHLQNWFINRR 143 >gi|270291185|ref|ZP_06197408.1| cytidine deaminase [Pediococcus acidilactici 7_4] gi|270280581|gb|EFA26416.1| cytidine deaminase [Pediococcus acidilactici 7_4] Length = 163 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 3/146 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+EAQ A + +E+P+GAV V + KII R N +D T HAE+LAI C L Sbjct: 14 YMGEALKEAQFAKMIDEVPIGAVVVHDGKIIGRGHNLREHSQDATTHAEVLAITEACAYL 73 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ I ++I +Y+GA +PK G + + +H Sbjct: 74 RSWRLWDCQLFVTIEPCLMCSGTIINSQIPEVYFGARDPKAGAVRSLYTVLEDQRLNHQV 133 Query: 127 EIYPGISEQRSRQIIQDFFK---ERR 149 E+ G++ ++ +++ FFK ERR Sbjct: 134 EVREGVAADQAAGLMKSFFKAIRERR 159 >gi|323488468|ref|ZP_08093714.1| hypothetical protein GPDM_03987 [Planococcus donghaensis MPA1U2] gi|323397860|gb|EGA90660.1| hypothetical protein GPDM_03987 [Planococcus donghaensis MPA1U2] Length = 162 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 53/149 (35%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+K + +M A+EEA AA + E+P+GAV V +++I+RA N + HAE+LAI+ Sbjct: 4 MEKDHFYMQLAIEEANKAAAKGEVPIGAVIVYKDEVIARAHNLRETTNNAVTHAELLAIQ 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C L L + LYVTLEPC MCA AI +RI + YGA + K G +++ + Sbjct: 64 EACLHLGNWRLEDTKLYVTLEPCPMCAGAILQSRIPHIVYGARDAKAGCVDSLYRLLNDD 123 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ + Q++ FF+ R Sbjct: 124 RFNHQCQVTENVLADECGQLLTQFFRNLR 152 >gi|167755137|ref|ZP_02427264.1| hypothetical protein CLORAM_00641 [Clostridium ramosum DSM 1402] gi|167705187|gb|EDS19766.1| hypothetical protein CLORAM_00641 [Clostridium ramosum DSM 1402] Length = 177 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 81/143 (56%), Gaps = 2/143 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A +EA +E+PVGAV V + KII+ N K TAHAEI+AI CR L Sbjct: 32 FMEIAYQEALKCLDMDEVPVGAVIVKDGKIIACGRNLRETSKRATAHAEIIAIEEACRTL 91 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L E LYVTLEPC MC+ AI +RI+R+ +GA + + T + + +H P Sbjct: 92 NSWYLDECTLYVTLEPCVMCSGAIINSRIQRVVFGAFESRWLALT--TIYQSDIPVNHQP 149 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I G+ + ++I+D+FK +R Sbjct: 150 VIVSGVLGDKCSKVIKDYFKNKR 172 >gi|189426160|ref|YP_001953337.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ] gi|189422419|gb|ACD96817.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ] Length = 157 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 58/145 (40%), Positives = 78/145 (53%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + +M A+ EA+ A + E+P+G V V NN+II+RA N +D AHAE+LAIR R Sbjct: 6 DYWMDKAIAEARKAEVIAEVPIGCVIVQNNRIIARAHNLREAKQDPAAHAELLAIRKAAR 65 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L E LYVTLEPC MC AI LARI + +G +PK G + +H Sbjct: 66 KLGNWRLLETTLYVTLEPCLMCMGAILLARIPTVVFGCHDPKAGAAGSLYDLSNDPRLNH 125 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ GI Q ++ +FF R Sbjct: 126 RFELVSGIRRQECSSMLSEFFAALR 150 >gi|163802511|ref|ZP_02196404.1| molecular chaperone DnaK [Vibrio sp. AND4] gi|159173812|gb|EDP58627.1| molecular chaperone DnaK [Vibrio sp. AND4] Length = 178 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E A+ A E+PVGAV V + KII+ NR+ D TAHAEI +R L Sbjct: 13 FMRRAMELAEQAEAEGEVPVGAVLVKDGKIIAEGWNRSICSHDATAHAEIQTLRKAGETL 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +R++R+ YGA + K G + +H Sbjct: 73 GNYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVYGAPDLKAGAAGTVLNLFESQAAYHYA 132 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E R +Q FFK RR Sbjct: 133 TVESGLLENECRTQLQAFFKRRR 155 >gi|260913765|ref|ZP_05920241.1| tRNA-specific adenosine deaminase [Pasteurella dagmatis ATCC 43325] gi|260632304|gb|EEX50479.1| tRNA-specific adenosine deaminase [Pasteurella dagmatis ATCC 43325] Length = 170 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 60/144 (41%), Positives = 81/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M ALE A A EIPVGAV V ++ N + D TAHAEI+A+R G + Sbjct: 9 WMRYALELADKAEQLGEIPVGAVLVDEEGNVLGEGWNLSIIESDPTAHAEIVALRQGGKT 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LYVTLEPCTMCA AI +RI+RL +GAS+ K G + + F+ +H+ Sbjct: 69 LQNYRLVNTTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAVGSRFHFFDDYKMNHT 128 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q + FF++RR Sbjct: 129 VEITAGVLQDECSQKLSVFFQKRR 152 >gi|227877638|ref|ZP_03995691.1| nucleoside deaminase [Lactobacillus crispatus JV-V01] gi|227862786|gb|EEJ70252.1| nucleoside deaminase [Lactobacillus crispatus JV-V01] Length = 185 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRI 65 +M A+++A+ A + E+P+GAV V + + G REL +D T HAE++AI+ C Sbjct: 29 YMQLAIDQAKEAEKQGEVPIGAVVVDPDGRVVGTGYNRRELDEDATQHAEMIAIKEACSK 88 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + +++ +H Sbjct: 89 LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFSVEKFNHH 148 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P G+ + Q+++DFF+ R Sbjct: 149 PHAIRGLYRDQCAQMLKDFFRAIR 172 >gi|315033440|gb|EFT45372.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0017] Length = 173 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 80/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +FM A+ EA+ A E+P+GAV V +II R N ++ TAHAE+ AI+ CR Sbjct: 14 ELFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACR 73 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L E L+VTLEPC MC+ A+ LARI +YYGA++PK G +H Sbjct: 74 GIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNH 133 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R ++ FFK+ R Sbjct: 134 VAYVEAGVLEEECRLLLVQFFKKLR 158 >gi|153837700|ref|ZP_01990367.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AQ3810] gi|260366298|ref|ZP_05778754.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus K5030] gi|260876398|ref|ZP_05888753.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AN-5034] gi|308095607|ref|ZP_05907165.2| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus Peru-466] gi|308126068|ref|ZP_05907632.2| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AQ4037] gi|149748895|gb|EDM59726.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AQ3810] gi|308086905|gb|EFO36600.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus Peru-466] gi|308092990|gb|EFO42685.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AN-5034] gi|308106632|gb|EFO44172.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AQ4037] gi|308112714|gb|EFO50254.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus K5030] Length = 174 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 55/147 (37%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +FM AL A+ A L E+PVGAV V + ++I+ NR+ D TAHAEI +R Sbjct: 9 QDEIFMRRALALAEQAELEGEVPVGAVLVKDGEVIAEGWNRSICSHDATAHAEIQTLRNA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 69 GAVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAA 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E R+ +Q FFK RR Sbjct: 129 YHYATVEKGLLEDECREQLQAFFKRRR 155 >gi|262402782|ref|ZP_06079343.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. RC586] gi|262351564|gb|EEZ00697.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. RC586] Length = 170 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E A A E+PVGAV V KII+ N + +D TAHAEI IR ++L Sbjct: 13 FMRRAIELAAQAEALGEVPVGAVLVQEGKIIAEGWNCSITHQDATAHAEIEVIREAGKVL 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S L + LYVTLEPC MCA A+ +R++R+ YGA + K G + +H Sbjct: 73 SNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFNSQASYHYA 132 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R +Q FF+ RR Sbjct: 133 TVEKGLLEEECRTQLQAFFQRRR 155 >gi|58336712|ref|YP_193297.1| cytidine-deoxycytidylate deaminase [Lactobacillus acidophilus NCFM] gi|58254029|gb|AAV42266.1| cytidine-deoxycytidylate deaminase [Lactobacillus acidophilus NCFM] Length = 168 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 53/145 (36%), Positives = 83/145 (57%), Gaps = 1/145 (0%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A+++A+ A + E+P+GAV V KII NR +D T HAE++AI+ C+ Sbjct: 9 TYMQLAIDKAKEAEKQGEVPIGAVVVDPTGKIIGTGYNRRELDEDSTQHAEMIAIKEACK 68 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + + + +H Sbjct: 69 NLGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFAVERFNH 128 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 P G+ + Q+++DFF+ R Sbjct: 129 HPHAIRGLYRDQCAQMLKDFFRAIR 153 >gi|16272843|ref|NP_439066.1| hypothetical protein HI0906 [Haemophilus influenzae Rd KW20] gi|260579996|ref|ZP_05847826.1| ComE operon protein 2 [Haemophilus influenzae RdAW] gi|1175980|sp|P44931|TADA_HAEIN RecName: Full=tRNA-specific adenosine deaminase gi|1573925|gb|AAC22565.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] gi|260093280|gb|EEW77213.1| ComE operon protein 2 [Haemophilus influenzae RdAW] Length = 173 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 82/143 (57%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A A EIPVGAV V + + II N + D TAHAEI+A+R G + + Sbjct: 15 MRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMCA AI +RI+RL +GAS+ K G I + F+ +H+ Sbjct: 75 QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 134 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + Q + FF++RR Sbjct: 135 EVTSGVLAEECSQKLSTFFQKRR 157 >gi|298368702|ref|ZP_06980020.1| tRNA-specific adenosine deaminase [Neisseria sp. oral taxon 014 str. F0314] gi|298282705|gb|EFI24192.1| tRNA-specific adenosine deaminase [Neisseria sp. oral taxon 014 str. F0314] Length = 241 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 55/145 (37%), Positives = 81/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +FM ALE+A +A EIPVGA V N +I+ A N + +DV+ HAEI A+ Sbjct: 93 EIFMRIALEQAVQSAAAGEIPVGAAVVKNGSVIAAAHNTCIQSRDVSRHAEISALAQAGA 152 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 +L L D+YVTLEPC MCA+A+ AR+ R+ +GA PK G + + + Sbjct: 153 VLGNYRLDGCDVYVTLEPCAMCASALIQARVARVIFGADEPKTGAAGSIIDLFAAHGINK 212 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + GI ++ R ++Q FF+E+R Sbjct: 213 HTAVTGGILKKECRTLLQQFFREKR 237 >gi|227903275|ref|ZP_04021080.1| nucleoside deaminase [Lactobacillus acidophilus ATCC 4796] gi|227869080|gb|EEJ76501.1| nucleoside deaminase [Lactobacillus acidophilus ATCC 4796] Length = 231 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+++A+ A + E+P+GAV V KII NR +D T HAE++AI+ C+ Sbjct: 73 YMQLAIDKAKEAEKQGEVPIGAVVVDPTGKIIGTGYNRRELDEDSTQHAEMIAIKEACKN 132 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + + + +H Sbjct: 133 LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFAVERFNHH 192 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P G+ + Q+++DFF+ R Sbjct: 193 PHAIRGLYRDQCAQMLKDFFRAIR 216 >gi|168214007|ref|ZP_02639632.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens CPE str. F4969] gi|170714472|gb|EDT26654.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens CPE str. F4969] Length = 143 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 84/143 (58%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +S ALEEA+ A + E+PVGAV V N +II+RA N LKD TAHAE+LAIR C L Sbjct: 1 MLSLALEEAEKAREKGEVPVGAVIVKNGEIIARAHNLKETLKDPTAHAEMLAIREACNKL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L ++YVTLEPC MCA AI +R+ ++Y G + G + ++ Sbjct: 61 NNWRLHGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ ++++ +I+ FFK+RR Sbjct: 121 EVVWE-NDEKCSKILTKFFKDRR 142 >gi|20428822|emb|CAD21697.1| hypothetical protein [Azoarcus evansii] Length = 154 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALE+A+ A +E+PVGAV VL+ +I+ R N+ D TAHAE++A+R L Sbjct: 6 YMRVALEQAREAGSCDEVPVGAVVVLDGEIVGRGFNQPIGRHDPTAHAEVMALRDAAARL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP +LYVTLEPC MC+ AI +RI R+ +GA +PK G + + + +H Sbjct: 66 GNYRLPGCELYVTLEPCAMCSGAIMHSRIARVVFGARDPKTGVAGSVIDLFAESRLNHHA 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I G+ + ++ FF RR Sbjct: 126 TISGGVLAEECGGLLSSFFAARR 148 >gi|295132290|ref|YP_003582966.1| cytidine/deoxycytidylate deaminase family protein [Zunongwangia profunda SM-A87] gi|294980305|gb|ADF50770.1| cytidine/deoxycytidylate deaminase family protein [Zunongwangia profunda SM-A87] Length = 149 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A EEAQ A + EIPVG V V+ N+II+R N L DVTAHAE+ +I L Sbjct: 10 FMKKAFEEAQIAFEKGEIPVGVVVVIKNRIIARGHNLTETLNDVTAHAEMQSITAAASFL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +YVTLEPC MCA A+ +++ RL + A + G + G Q H Sbjct: 70 GGKYLKGCTMYVTLEPCQMCAGALYWSQLSRLVFAAKDDHRGYQKFGVQL------HPKT 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI Q+++ FF ++R Sbjct: 124 EVSQGIMANECSQLLKKFFIQKR 146 >gi|238896010|ref|YP_002920746.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae NTUH-K2044] gi|238548328|dbj|BAH64679.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 180 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G +L Sbjct: 22 WMRHALTLAKRAWEEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI RL +GA + K G + +H Sbjct: 82 QNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLMDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + ++ DFF+ RR Sbjct: 142 EISEGVLAESCSAMLSDFFRWRR 164 >gi|152971415|ref|YP_001336524.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150956264|gb|ABR78294.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 172 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G +L Sbjct: 14 WMRHALTLAKRAWEEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 73 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI RL +GA + K G + +H Sbjct: 74 QNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLMDVLHHPGMNHRV 133 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + ++ DFF+ RR Sbjct: 134 EISEGVLAESCSAMLSDFFRWRR 156 >gi|189220193|ref|YP_001940833.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4] gi|189187051|gb|ACD84236.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4] Length = 173 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 57/139 (41%), Positives = 76/139 (54%), Gaps = 3/139 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+A+ A E+PVGAV V +I+ NR +DVTAHAE+ AIR + + Sbjct: 20 FMGLALEKAKEAFDNGEVPVGAVIVRGEEILGFGRNRVERHRDVTAHAEMEAIRQSQQRV 79 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVT EPC MC A+ L+RI R+ +G S+PK F+ T P Sbjct: 80 GDWRLDSTTLYVTKEPCLMCWGAVFLSRIERVVFGISDPKQADFCCIKDFF---TARKKP 136 Query: 127 EIYPGISEQRSRQIIQDFF 145 EI PG+ Q S +++ FF Sbjct: 137 EILPGVRSQESLELMHQFF 155 >gi|242240191|ref|YP_002988372.1| CMP/dCMP deaminase zinc-binding [Dickeya dadantii Ech703] gi|242132248|gb|ACS86550.1| CMP/dCMP deaminase zinc-binding [Dickeya dadantii Ech703] Length = 164 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL AQ A E+PVGAV V K+I NR D TAHAE++A+R G R+L Sbjct: 10 WMRHALILAQRAWDEGEVPVGAVLVQGGKVIGEGWNRPIGQHDPTAHAEMMALRQGGRVL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LY+TLEPC MCA A+ +RI RL YGA++ K G + +H Sbjct: 70 QNYRLLDTTLYITLEPCIMCAGAMVHSRISRLVYGAADAKTGAAGSLVDILRHPGMNHQV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I G+ + ++ DFF+ RR Sbjct: 130 AITSGVLAEACSTLLSDFFRMRR 152 >gi|161502277|ref|YP_001569389.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863624|gb|ABX20247.1| hypothetical protein SARI_00307 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 176 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G +L Sbjct: 22 WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RIRR+ +GA + K G + +H Sbjct: 82 QNYRLLDTTLYVTLEPCVMCAGAMVHSRIRRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ ++ DFF+ RR Sbjct: 142 EIIEGVLHDECAMLLSDFFRMRR 164 >gi|77460805|ref|YP_350312.1| tRNA-adenosine deaminase [Pseudomonas fluorescens Pf0-1] gi|77384808|gb|ABA76321.1| putative deaminase [Pseudomonas fluorescens Pf0-1] Length = 165 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE A A E+PVGAV V + +II R N D +AHAE++AIR + + Sbjct: 18 FMREALELAAQGAALGEVPVGAVLVQDGEIIGRGFNCPISTSDPSAHAEMVAIRAAAQAV 77 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP LYVTLEPC+MCA I +R+ R+ +GA PK G +++ QF+T +H Sbjct: 78 DNYRLPGSTLYVTLEPCSMCAGLIVHSRVSRVVFGALEPKAGIVQSQGQFFTQGFLNHRV 137 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ + ++ +FF+ RR Sbjct: 138 LYEGGVLAEECGAVLTEFFRARR 160 >gi|18309013|ref|NP_560947.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens str. 13] gi|18143688|dbj|BAB79737.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 143 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 84/143 (58%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +S ALEEA+ A + E+PVGAV V + +II+RA N LKD TAHAEILAIR C L Sbjct: 1 MLSLALEEAEKAREKGEVPVGAVIVKDGEIIARAHNLKETLKDPTAHAEILAIREACNKL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L ++YVTLEPC MCA AI +R+ ++Y G + G + ++ Sbjct: 61 NNWRLHGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ ++++ +I+ FFK+RR Sbjct: 121 EVVWQ-NDEKCSKILTKFFKDRR 142 >gi|289551636|ref|YP_003472540.1| tRNA-specific adenosine-34 deaminase [Staphylococcus lugdunensis HKU09-01] gi|289181167|gb|ADC88412.1| tRNA-specific adenosine-34 deaminase [Staphylococcus lugdunensis HKU09-01] Length = 158 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 56/149 (37%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ +M A+ EA+ A E+P+GAV V + ++I+RA N + TAHAE +AI Sbjct: 1 MRNDEYYMKIAIAEARKAEAIGEVPIGAVIVKDTQVIARAHNLRETSQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L L LYVTLEPC MCA AI ++RI R+ YGA +PKGG + Sbjct: 61 RASEVLGSWRLEACTLYVTLEPCVMCAGAIVMSRIPRVVYGAIDPKGGCSGSLMNLLEQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ EQ Q+++ FF+ R Sbjct: 121 QLNHQAIVKTGVLEQECGQLLRSFFQRLR 149 >gi|225847988|ref|YP_002728151.1| tRNA-specific adenosine deaminase [Sulfurihydrogenibium azorense Az-Fu1] gi|225643800|gb|ACN98850.1| tRNA-specific adenosine deaminase [Sulfurihydrogenibium azorense Az-Fu1] Length = 157 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 55/147 (37%), Positives = 86/147 (58%), Gaps = 2/147 (1%) Query: 1 MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 MK+ N F+ A++EA+ A + E+PVGAV V ++K++S+ N K+ HAEI+AI Sbjct: 1 MKEINTKFIELAIKEAEKALKKGEVPVGAVLVKDDKVVSKGYNLRISKKNALYHAEIVAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 C+ L L + LY TLEPC MCA AI ARI+++ + A + KGG + + + Sbjct: 61 ERACKKLKSWRLDDTVLYTTLEPCLMCAGAIMQARIKKVVFLAKDEKGGAVLSNYTVFDD 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146 E Y I ++R+ ++++DFFK Sbjct: 121 KKLPFKVE-YSYIPDERAEKLLKDFFK 146 >gi|218129188|ref|ZP_03457992.1| hypothetical protein BACEGG_00763 [Bacteroides eggerthii DSM 20697] gi|217988566|gb|EEC54886.1| hypothetical protein BACEGG_00763 [Bacteroides eggerthii DSM 20697] Length = 138 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 58/142 (40%), Positives = 77/142 (54%), Gaps = 5/142 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ A R E+PVGAV V +++I+RA N L DVTAHAE+ AI L Sbjct: 1 MKQALLEAQKAGDRGEVPVGAVVVCKDRVIARAHNLTETLTDVTAHAEMQAITAAASTLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L E LYVT+EPC MCA AI+ A+ RL +GA + K G Q Y H Sbjct: 61 GKYLNECTLYVTVEPCVMCAGAIAWAQTGRLVFGAEDEK-----RGYQRYAPHALHPKTV 115 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ ++++FF +R Sbjct: 116 VVKGVLGDECAALMKNFFAGKR 137 >gi|306834459|ref|ZP_07467572.1| tRNA-specific adenosine deaminase [Streptococcus bovis ATCC 700338] gi|304423261|gb|EFM26414.1| tRNA-specific adenosine deaminase [Streptococcus bovis ATCC 700338] Length = 168 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EAQ + + EIP+G V V N II R N E + HAEI+AI Sbjct: 12 FMREALKEAQKSLAKEEIPIGCVIVKNGDIIGRGHNAREERQKAILHAEIMAIDDANENE 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LARI ++ YGA+N K GG + T +H Sbjct: 72 GNWRLLDSTLFVTIEPCVMCSGAIGLARIPQVIYGAANQKFGGAGSLYDILTDVRLNHRV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI E I+QDFF++ R Sbjct: 132 EVETGILETECAAIMQDFFRKNR 154 >gi|229542244|ref|ZP_04431304.1| CMP/dCMP deaminase zinc-binding [Bacillus coagulans 36D1] gi|229326664|gb|EEN92339.1| CMP/dCMP deaminase zinc-binding [Bacillus coagulans 36D1] Length = 169 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A++EA A E+P+GAV VL+ K+I+ A N + AHAE+LAI C + Sbjct: 8 YMRLAIQEAVKAQRLREVPIGAVIVLDEKVIAAAHNLRETTQRAAAHAELLAIEKACEVT 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +LYVTLEPC MC+ A+ +RI+R+ YGA +PK G + +H Sbjct: 68 GSWRLENAELYVTLEPCPMCSGAVLQSRIKRVVYGAKDPKAGCAGSLMNLLEDGRFNHRS 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E ++++ FF+ R Sbjct: 128 EVVSGVLETECGELLRSFFRSLR 150 >gi|168210507|ref|ZP_02636132.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens B str. ATCC 3626] gi|170711409|gb|EDT23591.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens B str. ATCC 3626] Length = 143 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 84/143 (58%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +S ALEEA+ A + E+PVGAV V + +II+RA N LKD TAHAEILAIR C L Sbjct: 1 MLSLALEEAEKAREKGEVPVGAVIVKDGEIIARAHNLKETLKDPTAHAEILAIREACNKL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L ++YVTLEPC MCA AI +R+ ++Y G + G + ++ Sbjct: 61 NNWRLNGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ ++++ +I+ FFK+RR Sbjct: 121 EVVWE-NDEKCSKILTKFFKDRR 142 >gi|293394841|ref|ZP_06639131.1| tRNA-specific adenosine deaminase [Serratia odorifera DSM 4582] gi|291422592|gb|EFE95831.1| tRNA-specific adenosine deaminase [Serratia odorifera DSM 4582] Length = 179 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 58/145 (40%), Positives = 79/145 (54%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + +M AL A A E+PVGA+ VL+N++I NR D TAHAEI+A+R G Sbjct: 18 DYWMRQALTLALRAQEEGEVPVGALLVLDNQVIGEGWNRPIGRHDPTAHAEIMALRQGGA 77 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 +L L LYVTLEPC MCA A+ +RIRRL YGAS+ K G + +H Sbjct: 78 VLQNYRLLNATLYVTLEPCVMCAGAMVHSRIRRLVYGASDEKTGAAGSLVDILRHPGMNH 137 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 +I G+ + + +FF+ RR Sbjct: 138 QVDITAGVLAEECAATLSNFFRLRR 162 >gi|157371891|ref|YP_001479880.1| CMP/dCMP deaminase zinc-binding [Serratia proteamaculans 568] gi|157323655|gb|ABV42752.1| CMP/dCMP deaminase zinc-binding [Serratia proteamaculans 568] Length = 170 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A A E+PVGA+ VL+N++I NR D TAHAEI+A+R G +L Sbjct: 9 WMRQALRLALRAQEEGEVPVGALLVLDNQVIGEGWNRPIGRHDPTAHAEIMALRQGGAVL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA A+ +RIRRL YGA++ K G + +H Sbjct: 69 QNYRLLNATLYVTLEPCVMCAGAMVHSRIRRLVYGAADVKTGAAGSLVDILRHPGMNHQV 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + + +FF+ RR Sbjct: 129 EILSGVLAEECAATLSNFFRMRR 151 >gi|110798954|ref|YP_694504.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens ATCC 13124] gi|169343373|ref|ZP_02864377.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens C str. JGS1495] gi|182625368|ref|ZP_02953141.1| tRNA-specific adenosine deaminase [Clostridium perfringens D str. JGS1721] gi|110673601|gb|ABG82588.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens ATCC 13124] gi|169298459|gb|EDS80545.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens C str. JGS1495] gi|177909365|gb|EDT71817.1| tRNA-specific adenosine deaminase [Clostridium perfringens D str. JGS1721] Length = 143 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 84/143 (58%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +S ALEEA+ A + E+PVGAV V + +II+RA N LKD TAHAEILAIR C L Sbjct: 1 MLSLALEEAEKAREKGEVPVGAVIVKDGEIIARAHNLKETLKDPTAHAEILAIREACNKL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L ++YVTLEPC MCA AI +R+ ++Y G + G + ++ Sbjct: 61 NNWRLHGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ ++++ +I+ FFK+RR Sbjct: 121 EVVWE-NDEKCSKILTKFFKDRR 142 >gi|89073121|ref|ZP_01159660.1| Putative cytosine/adenosine deaminase [Photobacterium sp. SKA34] gi|89051074|gb|EAR56531.1| Putative cytosine/adenosine deaminase [Photobacterium sp. SKA34] Length = 175 Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E A A E+PVGAV V N +++ NR+ D TAHAEI+A+R ++L Sbjct: 13 FMRRAIELAAKAEEEGEVPVGAVVVYNGRVVGEGWNRSIGQHDATAHAEIMALRQAGKVL 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ R+ ++ YGA + K G + + +H Sbjct: 73 ENYRLIDTTLYVTLEPCPMCAGAMVHCRVGKVVYGADDLKTGAAGSTMNLLSYDGVNHHV 132 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E G+ + R +Q FFK RR Sbjct: 133 EQTSGVLVEECRAQLQAFFKRRR 155 >gi|255304952|ref|ZP_05349126.1| putative cytosine/adenosine deaminase [Clostridium difficile ATCC 43255] Length = 151 Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 86/147 (58%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + + +M AL+EA A + E P+GA+ V +N+II+RA N LKD TAHAEILAI+ Sbjct: 2 ESSFYMKEALKEAYKAYNKKETPIGAIIVKDNQIIARAHNLTETLKDSTAHAEILAIKQA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L + DLYVT+EPC MC+ AI +RI++L G + K IE +F Sbjct: 62 SEKLGGWRLTDCDLYVTMEPCIMCSGAIVNSRIKKLIIGTRHVKNSYIEKQHEFKLDYFN 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +++ ++ + ++ ++Q+FFK R Sbjct: 122 NNNVKVAFDVLQEECSIMLQEFFKALR 148 >gi|157150388|ref|YP_001449474.1| putative cytidine/deoxycytidylate deaminase [Streptococcus gordonii str. Challis substr. CH1] gi|157075182|gb|ABV09865.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus gordonii str. Challis substr. CH1] Length = 177 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 33 FMLEALKEARIALENDEIPIGCVIVRDGQIIGRGHNAREELQRAVMHAEIMAIEEANHHE 92 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T +H Sbjct: 93 NGWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDERLNHRV 152 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ ++ QI+QDFF+ RR Sbjct: 153 EVETGVLQEECAQIMQDFFRNRR 175 >gi|148985360|ref|ZP_01818565.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP3-BS71] gi|148986205|ref|ZP_01819157.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP3-BS71] gi|148995215|ref|ZP_01824050.1| deoxyuridine 5'-triphosphate nucleotidohydrolase [Streptococcus pneumoniae SP9-BS68] gi|149004172|ref|ZP_01828969.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP14-BS69] gi|149023458|ref|ZP_01836047.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP23-BS72] gi|168483689|ref|ZP_02708641.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae CDC1873-00] gi|168486729|ref|ZP_02711237.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae CDC1087-00] gi|169833520|ref|YP_001693493.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae Hungary19A-6] gi|221230966|ref|YP_002510118.1| deaminase [Streptococcus pneumoniae ATCC 700669] gi|225853633|ref|YP_002735145.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae JJA] gi|225857883|ref|YP_002739393.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae 70585] gi|237650015|ref|ZP_04524267.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae CCRI 1974] gi|237822610|ref|ZP_04598455.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae CCRI 1974M2] gi|147757834|gb|EDK64845.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP14-BS69] gi|147921819|gb|EDK72947.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP3-BS71] gi|147922318|gb|EDK73438.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP3-BS71] gi|147926817|gb|EDK77872.1| deoxyuridine 5'-triphosphate nucleotidohydrolase [Streptococcus pneumoniae SP9-BS68] gi|147929781|gb|EDK80771.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP23-BS72] gi|168996022|gb|ACA36634.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae Hungary19A-6] gi|172043028|gb|EDT51074.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae CDC1873-00] gi|183570307|gb|EDT90835.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae CDC1087-00] gi|220673426|emb|CAR67886.1| putative deaminase [Streptococcus pneumoniae ATCC 700669] gi|225721389|gb|ACO17243.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae 70585] gi|225723035|gb|ACO18888.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae JJA] gi|301793341|emb|CBW35702.1| putative deaminase [Streptococcus pneumoniae INV104] gi|301799211|emb|CBW31724.1| putative deaminase [Streptococcus pneumoniae OXC141] gi|332075677|gb|EGI86144.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Streptococcus pneumoniae GA17570] gi|332204048|gb|EGJ18113.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Streptococcus pneumoniae GA47901] gi|332205041|gb|EGJ19104.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Streptococcus pneumoniae GA47368] Length = 155 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 63/151 (41%), Positives = 84/151 (55%), Gaps = 4/151 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LS+E +D L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 65 DAN--LSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILT 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 123 DERLNHRVEVEIGILEDECAAIMQDFFRNRR 153 >gi|299143513|ref|ZP_07036593.1| cytidine/deoxycytidylate deaminase family protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517998|gb|EFI41737.1| cytidine/deoxycytidylate deaminase family protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 153 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 56/150 (37%), Positives = 89/150 (59%), Gaps = 3/150 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + + FM+ AL+ A+ + +IP+GA+ V N++II R N+ LKD +AHAE++A++ Sbjct: 1 MNRNDFFMNEALKLAKISYDNGDIPIGAIIVFNDEIIGRGFNKKELLKDASAHAELIAMK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL- 119 + L+ L + +YVTLEPC MCA AI R++++Y GA N + G G++ L Sbjct: 61 EASKFLNSYHLEDCTMYVTLEPCAMCAGAILNFRLKKIYIGAKNERFGCC--GSKINLLN 118 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ E GI E + +I +FF E R Sbjct: 119 YNFNHTCECEFGILEDDCKNLISNFFIELR 148 >gi|332830410|gb|EGK03038.1| hypothetical protein HMPREF9455_01288 [Dysgonomonas gadei ATCC BAA-286] Length = 147 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 81/143 (56%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EAQ A + E+P+GAV V N+II+RA N L DVTAHAE+ AI L Sbjct: 10 YMRQALNEAQIAFEKKEVPIGAVIVCQNRIIARAHNLTETLNDVTAHAEMQAITAAANFL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVTLEPC MCA + ++I ++ +GA + K G ++ H+ Sbjct: 70 GGKYLTNCTLYVTLEPCPMCAGGLLWSQIPKVVFGAKDEK-----KGYSLFSPNILHNKT 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI E+ ++++FF+++R Sbjct: 125 SIISGILEEECAFLLKEFFRQKR 147 >gi|307704429|ref|ZP_07641340.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK597] gi|307707916|ref|ZP_07644391.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus mitis NCTC 12261] gi|307615981|gb|EFN95179.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus mitis NCTC 12261] gi|307622002|gb|EFO01028.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK597] Length = 155 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 63/151 (41%), Positives = 84/151 (55%), Gaps = 4/151 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 VEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LS+E +D L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 65 NAN--LSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILT 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 123 DERLNHRVEVETGILEDECAAIMQDFFRNRR 153 >gi|257082102|ref|ZP_05576463.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis E1Sol] gi|257419759|ref|ZP_05596753.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T11] gi|257422022|ref|ZP_05599012.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis X98] gi|256990132|gb|EEU77434.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis E1Sol] gi|257161587|gb|EEU91547.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T11] gi|257163846|gb|EEU93806.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis X98] gi|315157050|gb|EFU01067.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0043] Length = 173 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA+ A E+P+GAV V +II R N ++ TAHAE+ AI+ CR + Sbjct: 16 FMREAIAEAKKAEGLAEVPIGAVIVRKGEIIGRGHNLREARQEATAHAEMYAIQEACRGI 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E L+VTLEPC MC+ A+ LARI +YYGA++PK G +H Sbjct: 76 ENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVA 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R ++ FFK+ R Sbjct: 136 YVEAGVLEEECRLLLVQFFKKLR 158 >gi|229917437|ref|YP_002886083.1| CMP/dCMP deaminase zinc-binding [Exiguobacterium sp. AT1b] gi|229468866|gb|ACQ70638.1| CMP/dCMP deaminase zinc-binding [Exiguobacterium sp. AT1b] Length = 166 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 53/149 (35%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ FM A+EEA+ A E+P+G V V +++I+ NR + AHAE++AI Sbjct: 1 MERDERFMQLAIEEAKKAEAIGEVPIGCVIVKGDQVIATGHNRRETDRLAAAHAEMIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L + +LYVTLEPC MCA AI L+R++R+ +GA +PKGG Sbjct: 61 TANETLGNWRLEDCELYVTLEPCPMCAGAIVLSRVKRVIFGAHDPKGGCCGTLMNLVQDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ + + Q++ DFF+ R Sbjct: 121 RFNHQAEVTENVLAEECGQLLTDFFRALR 149 >gi|37520622|ref|NP_923999.1| putative cytidine and deoxycytidylate deaminase [Gloeobacter violaceus PCC 7421] gi|35211616|dbj|BAC88994.1| gll1053 [Gloeobacter violaceus PCC 7421] Length = 150 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 59/150 (39%), Positives = 82/150 (54%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAI 59 MK + +M ALE A+ A E+PVGA+ V + ++ G RE D TAHAEI+A+ Sbjct: 1 MKSHSEWMGMALELAREAGRVGEVPVGALVVDASGVLLATGANRRERDYDPTAHAEIVAM 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R C L L + LYVTLEPC MCA AI +R+ L YGA +PK G + + Sbjct: 61 RAACAKLRDWRLTDCTLYVTLEPCAMCAGAILQSRLGLLVYGADDPKAGAVGSVLNLPAS 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A H + GI E+ R ++ +F+E+R Sbjct: 121 AVSFHRLPVVAGIEERACRDLLCRWFEEQR 150 >gi|319901083|ref|YP_004160811.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides helcogenes P 36-108] gi|319416114|gb|ADV43225.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides helcogenes P 36-108] Length = 159 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 79/143 (55%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA+ A R E+PVGAV V ++II+RA N L DVTAHAE+ AI L Sbjct: 21 YMKQALLEARKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAAASTL 80 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L E LYVT+EPC MCA AI+ A++ +L +GA + K G Q Y H Sbjct: 81 GGKYLNECTLYVTVEPCVMCAGAIAWAQMGKLVFGAVDEK-----RGYQRYASQALHPKT 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI ++++FF +R Sbjct: 136 IVVQGILADECAALMKEFFAGKR 158 >gi|90579814|ref|ZP_01235622.1| Putative cytosine/adenosine deaminase [Vibrio angustum S14] gi|90438699|gb|EAS63882.1| Putative cytosine/adenosine deaminase [Vibrio angustum S14] Length = 175 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E A A E+PVGAV V N +++ NR+ D TAHAEI+A+R ++L Sbjct: 13 FMRRAIELAAKAEEEGEVPVGAVVVYNGQVVGEGWNRSIGQHDATAHAEIMALRQAGKVL 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ R+ ++ YGA + K G + + +H Sbjct: 73 ENYRLIDTTLYVTLEPCPMCAGAMVHCRVGKVVYGADDLKTGAAGSTMNLLSYDGVNHHV 132 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E G+ + R +Q FFK RR Sbjct: 133 EQTSGVLVEECRAQLQAFFKRRR 155 >gi|317496201|ref|ZP_07954561.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Gemella moribillum M424] gi|316913776|gb|EFV35262.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Gemella moribillum M424] Length = 153 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 53/149 (35%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK N +M ALEEA+ A + E+PVGAV V++++++++A N + V HAE+L I+ Sbjct: 1 MKDHNYYMEMALEEARRAYQKGEVPVGAVLVIDDEVVAKAHNTREASQQVLNHAEMLVIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C + L LY T+EPC MC+ AI AR+ + YGA++ K G + Sbjct: 61 EACEKIGFWRLDNSYLYTTVEPCVMCSGAIVQARVENVIYGAADVKYGCCGSCIDLVANN 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ E+ +++DFF+E R Sbjct: 121 KFNHQAHIISGVLEEECAALMKDFFRELR 149 >gi|33597610|ref|NP_885253.1| putative zinc-binding hydrolase [Bordetella parapertussis 12822] gi|33602013|ref|NP_889573.1| putative zinc-binding hydrolase [Bordetella bronchiseptica RB50] gi|33574038|emb|CAE38361.1| putative zinc-binding hydrolase [Bordetella parapertussis] gi|33576451|emb|CAE33529.1| putative zinc-binding hydrolase [Bordetella bronchiseptica RB50] Length = 168 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 58/144 (40%), Positives = 81/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ ALE+AQ AA E+PVGAV V +++ NR +D TAHAEI+A+R R Sbjct: 19 LMALALEQAQEAARLGEVPVGAVVVDAQGEVLGAGYNRTIIDRDPTAHAEIVALRAAARR 78 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L LP V LYVTLEPC MC A+ AR+ R+ YGA +PK G + + +H Sbjct: 79 LDNYRLPGVSLYVTLEPCVMCIGAMLHARLARVVYGARDPKTGACGSVLDVGAVGQLNHH 138 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 I G+ + ++++ FF+ RR Sbjct: 139 TTITGGVLAEPCGELLRGFFRARR 162 >gi|88813490|ref|ZP_01128725.1| zinc-binding domain protein [Nitrococcus mobilis Nb-231] gi|88789280|gb|EAR20412.1| zinc-binding domain protein [Nitrococcus mobilis Nb-231] Length = 181 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 55/148 (37%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM+ ALE A+ A E+PVGAV V +++ NR +D TAHAEI A+R Sbjct: 24 DQDQAFMARALELARRAQAHGEVPVGAVVVQRERVVGEGYNRPIATRDPTAHAEIEALRA 83 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LP LYVTLEPC MC A+ AR+ RL +GA +PK G + + Sbjct: 84 AGQALGAYRLPATTLYVTLEPCAMCVGALIHARVARLVFGAHDPKTGACGGALRLIDYPS 143 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + +I++ FF++RR Sbjct: 144 HNHRIALCGGVLAETCSEILRAFFRDRR 171 >gi|315659096|ref|ZP_07911961.1| zinc-binding domain protein [Staphylococcus lugdunensis M23590] gi|315495820|gb|EFU84150.1| zinc-binding domain protein [Staphylococcus lugdunensis M23590] Length = 158 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/149 (37%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ +M A+ EA+ A E+P+GAV V + ++I+RA N + TAHAE +AI Sbjct: 1 MRNDEYYMKIAIAEARKAEAIGEVPIGAVIVKDTQVIARAHNLRETSQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L L LYVTLEPC MCA AI ++RI R+ YGA +PKGG + Sbjct: 61 RASEVLGSWRLEACTLYVTLEPCVMCAGAIVMSRIPRVVYGAIDPKGGCSGSLMNLLEQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ EQ Q+++ FF+ R Sbjct: 121 QFNHQAIVKTGVLEQECGQLLRSFFQRLR 149 >gi|300860777|ref|ZP_07106864.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TUSoD Ef11] gi|300849816|gb|EFK77566.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TUSoD Ef11] gi|315146059|gb|EFT90075.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX2141] Length = 173 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA+ A E+P+GAV V +II R N ++ TAHAE+ AI+ CR + Sbjct: 16 FMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACRGI 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E L+VTLEPC MC+ A+ LARI +YYGA++PK G +H Sbjct: 76 ENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVA 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R ++ FFK+ R Sbjct: 136 YVEAGVLEEECRLLLVQFFKKLR 158 >gi|91215472|ref|ZP_01252443.1| putative cytosine/adenosine deaminase [Psychroflexus torquis ATCC 700755] gi|91186424|gb|EAS72796.1| putative cytosine/adenosine deaminase [Psychroflexus torquis ATCC 700755] Length = 149 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/145 (39%), Positives = 83/145 (57%), Gaps = 6/145 (4%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL+EAQ A + EIPVGAV NN+II+++ N +L DVTAHAE+ AI Sbjct: 8 HYFMKKALQEAQQAFDKGEIPVGAVVTHNNQIIAKSHNLTEQLTDVTAHAEMQAITAAAN 67 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + L LYVTLEPC MCA A+ +++ RL + A + G GTQ + H Sbjct: 68 HIGGKYLRGCTLYVTLEPCQMCAGALYWSQLSRLVFAAPDEGRGYRTLGTQLHPKTKVDH 127 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 GI E+ + ++++ FF ++R Sbjct: 128 ------GILEEEASRLLKAFFIQKR 146 >gi|29376713|ref|NP_815867.1| cytidine/deoxycytidylate deaminase family protein [Enterococcus faecalis V583] gi|227520261|ref|ZP_03950310.1| nucleoside deaminase [Enterococcus faecalis TX0104] gi|227555305|ref|ZP_03985352.1| nucleoside deaminase [Enterococcus faecalis HH22] gi|229549515|ref|ZP_04438240.1| nucleoside deaminase [Enterococcus faecalis ATCC 29200] gi|256617220|ref|ZP_05474066.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ATCC 4200] gi|256763008|ref|ZP_05503588.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T3] gi|256853656|ref|ZP_05559021.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T8] gi|256956593|ref|ZP_05560764.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis DS5] gi|256963481|ref|ZP_05567652.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis HIP11704] gi|257079519|ref|ZP_05573880.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis JH1] gi|257084716|ref|ZP_05579077.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Fly1] gi|257087338|ref|ZP_05581699.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis D6] gi|257090472|ref|ZP_05584833.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis CH188] gi|294779058|ref|ZP_06744471.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis PC1.1] gi|307270381|ref|ZP_07551686.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX4248] gi|307272388|ref|ZP_07553644.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0855] gi|307277264|ref|ZP_07558368.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX2134] gi|307287809|ref|ZP_07567847.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0109] gi|307290876|ref|ZP_07570767.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0411] gi|312901462|ref|ZP_07760737.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0470] gi|312903780|ref|ZP_07762953.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0635] gi|312953348|ref|ZP_07772190.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0102] gi|29344177|gb|AAO81937.1| cytidine/deoxycytidylate deaminase family protein [Enterococcus faecalis V583] gi|227072340|gb|EEI10303.1| nucleoside deaminase [Enterococcus faecalis TX0104] gi|227175516|gb|EEI56488.1| nucleoside deaminase [Enterococcus faecalis HH22] gi|229305333|gb|EEN71329.1| nucleoside deaminase [Enterococcus faecalis ATCC 29200] gi|256596747|gb|EEU15923.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ATCC 4200] gi|256684259|gb|EEU23954.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T3] gi|256710599|gb|EEU25642.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T8] gi|256947089|gb|EEU63721.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis DS5] gi|256953977|gb|EEU70609.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis HIP11704] gi|256987549|gb|EEU74851.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis JH1] gi|256992746|gb|EEU80048.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Fly1] gi|256995368|gb|EEU82670.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis D6] gi|256999284|gb|EEU85804.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis CH188] gi|294453888|gb|EFG22277.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis PC1.1] gi|306498076|gb|EFM67602.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0411] gi|306501197|gb|EFM70502.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0109] gi|306506194|gb|EFM75360.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX2134] gi|306510942|gb|EFM79956.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0855] gi|306513289|gb|EFM81916.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX4248] gi|310628736|gb|EFQ12019.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0102] gi|310632854|gb|EFQ16137.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0635] gi|311291451|gb|EFQ70007.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0470] gi|315025888|gb|EFT37820.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX2137] gi|315028203|gb|EFT40135.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX4000] gi|315035707|gb|EFT47639.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0027] gi|315149190|gb|EFT93206.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0012] gi|315154468|gb|EFT98484.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0031] gi|315157427|gb|EFU01444.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0312] gi|315161835|gb|EFU05852.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0645] gi|315164307|gb|EFU08324.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX1302] gi|315166488|gb|EFU10505.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX1341] gi|315171494|gb|EFU15511.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX1342] gi|315575193|gb|EFU87384.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0309B] gi|315578180|gb|EFU90371.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0630] gi|315582620|gb|EFU94811.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0309A] gi|323481270|gb|ADX80709.1| cytidine and deoxycytidylate deaminase family protein [Enterococcus faecalis 62] gi|327535599|gb|AEA94433.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis OG1RF] Length = 173 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA+ A E+P+GAV V +II R N ++ TAHAE+ AI+ CR + Sbjct: 16 FMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACRGI 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E L+VTLEPC MC+ A+ LARI +YYGA++PK G +H Sbjct: 76 ENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVA 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R ++ FFK+ R Sbjct: 136 YVEAGVLEEECRLLLVQFFKKLR 158 >gi|121998459|ref|YP_001003246.1| CMP/dCMP deaminase, zinc-binding [Halorhodospira halophila SL1] gi|121589864|gb|ABM62444.1| CMP/dCMP deaminase, zinc-binding protein [Halorhodospira halophila SL1] Length = 142 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 58/142 (40%), Positives = 82/142 (57%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M+ ALE A+ AA + E+PVGAV V + ++ N+ +D TAHAEI A+R + Sbjct: 1 MARALELARYAADQGEVPVGAVVVRDGVLLGEGRNQPIVSRDPTAHAEINALRAAGQAAG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 LP LYVTLEPC MCA A+ ARI RL YGA++PK G L +H E Sbjct: 61 AYRLPGATLYVTLEPCFMCAGALIHARIERLVYGAADPKTGACGGQFDLLGLPGHNHRVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+S + + ++++FF+ RR Sbjct: 121 VTAGVSGEAAAGLLREFFRARR 142 >gi|199599026|ref|ZP_03212433.1| Cytosine/adenosine deaminase [Lactobacillus rhamnosus HN001] gi|199590062|gb|EDY98161.1| Cytosine/adenosine deaminase [Lactobacillus rhamnosus HN001] Length = 170 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/148 (44%), Positives = 86/148 (58%), Gaps = 6/148 (4%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N +MS AL EA+ AA E+P+GAV V + +II R N +D T HAEILAI+ CR Sbjct: 9 NQYMSAALAEAKKAAAIGEVPIGAVVVHDQQIIGRGYNLRETTQDATQHAEILAIQAACR 68 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL---AT 121 L L + L+VTLEPC MCA A+ ARI Y+GA++PK G GT FY L Sbjct: 69 QLGTWRLEDCSLFVTLEPCPMCAGAMINARIATCYFGATDPKAG--VAGT-FYNLLEDTR 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + PGI S ++Q+FF+ R Sbjct: 126 FNHQVAVVPGIQATASAALLQEFFRAIR 153 >gi|15836532|ref|NP_301056.1| cytosine deaminase [Chlamydophila pneumoniae J138] gi|33242370|ref|NP_877311.1| putative cytosine deaminase [Chlamydophila pneumoniae TW-183] gi|8979374|dbj|BAA99208.1| cytosine deaminase [Chlamydophila pneumoniae J138] gi|33236881|gb|AAP98968.1| putative cytosine deaminase [Chlamydophila pneumoniae TW-183] Length = 148 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/142 (39%), Positives = 81/142 (57%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A +EA+ A ++E+PVG V V ++KII+RA N +LKD TAHAEIL I + L Sbjct: 1 MQQAFKEARKAYDQDEVPVGCVIVKDDKIIARAHNSVEKLKDATAHAEILCIGSAAQDLD 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LY TLEPC MCA AI LARI R+ + A + + G + +T H+ Sbjct: 61 NWRLLDTVLYCTLEPCLMCAGAIQLARIPRIVWAAPDVRLGAGGSWVNIFTEEHPFHTVS 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 G+ + + +++ FF E+R Sbjct: 121 CTGGVCSEEAEHLMKKFFVEKR 142 >gi|241889023|ref|ZP_04776327.1| tRNA-specific adenosine deaminase [Gemella haemolysans ATCC 10379] gi|241864272|gb|EER68650.1| tRNA-specific adenosine deaminase [Gemella haemolysans ATCC 10379] Length = 165 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +K + +M ALEEA+ A + E+P+GAV V+ +K++++A N E + HAEIL I+ Sbjct: 12 VKDHSYYMEMALEEARRAYAKGEVPIGAVLVIGDKVVAKAHNTREENQQALNHAEILVIK 71 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C L LY T+EPC MC+ AI ARI + YGAS+PK G + Sbjct: 72 ESCEKQGFWRLDNSYLYTTVEPCVMCSGAIVQARIENVIYGASDPKYGCCGSCIDLVGEN 131 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I G+ E+ ++++FFKE R Sbjct: 132 KFNHQAKIISGVLEEECSILMKNFFKELR 160 >gi|225860063|ref|YP_002741572.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae Taiwan19F-14] gi|298229197|ref|ZP_06962878.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254029|ref|ZP_06977615.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298501811|ref|YP_003723751.1| cytosine deaminase [Streptococcus pneumoniae TCH8431/19A] gi|225728250|gb|ACO24101.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae Taiwan19F-14] gi|298237406|gb|ADI68537.1| possible cytosine deaminase [Streptococcus pneumoniae TCH8431/19A] gi|327390436|gb|EGE88776.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Streptococcus pneumoniae GA04375] Length = 155 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/151 (41%), Positives = 84/151 (55%), Gaps = 4/151 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LS+E +D L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 65 DAN--LSKESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILT 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 123 DERLNHRVEVEIGILEDECAAIMQDFFRNRR 153 >gi|328472552|gb|EGF43415.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus 10329] Length = 199 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 55/147 (37%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +FM AL A+ A L E+PVGAV V + ++I+ NR+ D TAHAEI +R Sbjct: 34 QDEIFMRRALALAEQAELEGEVPVGAVLVKDGEVIAEGWNRSICSHDATAHAEIQTLRNA 93 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 94 GAVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAA 153 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E R+ +Q FFK RR Sbjct: 154 YHYATVERGLLEDECREQLQAFFKRRR 180 >gi|298373649|ref|ZP_06983638.1| tRNA-specific adenosine deaminase [Bacteroidetes oral taxon 274 str. F0058] gi|298274701|gb|EFI16253.1| tRNA-specific adenosine deaminase [Bacteroidetes oral taxon 274 str. F0058] Length = 143 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 76/143 (53%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA A E+P+GAV V II++A N L DVTAHAE+ A+ M L Sbjct: 6 FMQQALREAAYAFDEGEVPIGAVVVCAGNIIAKAHNLTERLNDVTAHAEMQAVTMAANYL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC MCA A++ A I R+ +GA + K G + H Sbjct: 66 GGKYLNDCTLYVTLEPCVMCAGALAWAHIGRVVFGAYDDK-----RGFGRFAPKALHTKT 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ Q +I+Q FF +R Sbjct: 121 ELVGGVMAQECGEILQRFFSTKR 143 >gi|260102436|ref|ZP_05752673.1| tRNA-specific adenosine deaminase [Lactobacillus helveticus DSM 20075] gi|260083756|gb|EEW67876.1| tRNA-specific adenosine deaminase [Lactobacillus helveticus DSM 20075] Length = 168 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 82/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+++A+ A + E+P+GAV V K+I NR +D T HAE++AI+ C Sbjct: 10 YMELAIDQAKEAEKQGEVPIGAVVVDPEGKVIGTGYNRRELDEDSTQHAEMIAIKEACHN 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + + + +H Sbjct: 70 LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFEVEKFNHH 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P G+ + Q+++DFF+ R Sbjct: 130 PHSISGLYRDQCAQMLKDFFRAIR 153 >gi|320353809|ref|YP_004195148.1| tRNA-adenosine deaminase [Desulfobulbus propionicus DSM 2032] gi|320122311|gb|ADW17857.1| tRNA-adenosine deaminase [Desulfobulbus propionicus DSM 2032] Length = 146 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL +A+ AA E+PVGAVA+ I++ AGN D + HAE++ +R ++ Sbjct: 3 LMRRALVQARQAAEAGEVPVGAVAIDAQGAILAEAGNNCIGASDPSGHAEMVVLRRAAQV 62 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + LP + LYVTLEPC MCAA + ARI RL +GA++PKGG I + + + +H Sbjct: 63 VGNYRLPGLTLYVTLEPCPMCAALMVHARIARLVFGATDPKGGAIVSKYRIGSDGLLNHG 122 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G+ + +++DFF+ RR Sbjct: 123 FSVTGGVCAEECGNLLRDFFRGRR 146 >gi|172056061|ref|YP_001812521.1| CMP/dCMP deaminase zinc-binding [Exiguobacterium sibiricum 255-15] gi|171988582|gb|ACB59504.1| CMP/dCMP deaminase zinc-binding [Exiguobacterium sibiricum 255-15] Length = 169 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ +M A+EEA+ A E+P+G V V +++I+ N TAHAE+LAI Sbjct: 2 MERHEHYMRLAIEEAKKAKAIGEVPIGCVIVKGDEVIATGYNHRETNHQATAHAELLAIE 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C L+ L +LYVTLEPC MCA AI L+RI + +GA +PKGG Sbjct: 62 EACNKLANWRLEGCELYVTLEPCPMCAGAIMLSRIEHVIFGAVDPKGGCCGTLMNLVQDE 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ EQ +++ FF+E R Sbjct: 122 RFNHVSQLTGGVLEQECGEMLTSFFRELR 150 >gi|322388496|ref|ZP_08062098.1| tRNA-specific adenosine deaminase [Streptococcus infantis ATCC 700779] gi|321140614|gb|EFX36117.1| tRNA-specific adenosine deaminase [Streptococcus infantis ATCC 700779] Length = 166 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/151 (39%), Positives = 85/151 (56%), Gaps = 4/151 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V + K+I R N EL+ HAEI+AI Sbjct: 16 LEEKEAFMREALKEAEIALEHDEIPIGCVIVKDGKVIGRGHNAREELQRAVMHAEIMAIE 75 Query: 61 MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LS+E +D L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 76 NAN--LSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVIYGAKNQKFGAAGSLYDILT 133 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E +I+QDFF+ RR Sbjct: 134 DERLNHRVDVETGVLENECAEIMQDFFRNRR 164 >gi|329117262|ref|ZP_08245979.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus parauberis NCFD 2020] gi|326907667|gb|EGE54581.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus parauberis NCFD 2020] Length = 169 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+ + + EIP+G V V + +II R N EL HAE++AI Sbjct: 11 FMREALREAEKSLAKEEIPIGCVIVKDGQIIGRGHNAREELNQAIMHAEMMAISQANAHE 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E ++VT+EPC MC+ AI LARI ++ YGA+N K GG ++ Q T +H Sbjct: 71 GNWRLLETTMFVTIEPCVMCSGAIGLARIPKVIYGAANQKFGGAQSLYQILTDERLNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E I+Q FF++ R Sbjct: 131 ELETGVLEADCAAIMQSFFRQNR 153 >gi|33592773|ref|NP_880417.1| putative zinc-binding hydrolase [Bordetella pertussis Tohama I] gi|33572421|emb|CAE41987.1| putative zinc-binding hydrolase [Bordetella pertussis Tohama I] gi|332382186|gb|AEE67033.1| putative zinc-binding hydrolase [Bordetella pertussis CS] Length = 149 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ ALE+AQ AA E+PVGAV V +++ NR +D TAHAEI+A+R R L Sbjct: 1 MALALEQAQEAARLGEVPVGAVVVDAQGEVLGTGYNRTIIDRDPTAHAEIVALRAAARRL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP V LYVTLEPC MC A+ AR+ R+ YGA +PK G + + +H Sbjct: 61 DNYRLPGVSLYVTLEPCVMCIGAMLHARLARVVYGARDPKTGACGSVLDVGAVGQLNHHT 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I G+ + ++++ FF+ RR Sbjct: 121 TITGGVLAEPCGELLRGFFRARR 143 >gi|171777570|ref|ZP_02919258.1| hypothetical protein STRINF_00093 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283179|gb|EDT48603.1| hypothetical protein STRINF_00093 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 168 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EAQ + + EIP+G V V N II R N E + HAEI+AI Sbjct: 12 FMREALKEAQKSLAKEEIPIGCVIVKNGDIIGRGHNAREERQKAILHAEIMAIDDANENE 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LAR+ ++ YGA+N K GG + T +H Sbjct: 72 GSWRLLDSTLFVTIEPCVMCSGAIGLARVPQVIYGAANQKFGGAGSLYDILTDVRLNHRV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI E I+QDFF++ R Sbjct: 132 EVETGILETECAAIMQDFFRKNR 154 >gi|15899968|ref|NP_344572.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae TIGR4] gi|111657255|ref|ZP_01408023.1| hypothetical protein SpneT_02001535 [Streptococcus pneumoniae TIGR4] gi|148996424|ref|ZP_01824142.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP11-BS70] gi|149010880|ref|ZP_01832185.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP19-BS75] gi|168492307|ref|ZP_02716450.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae CDC0288-04] gi|168576944|ref|ZP_02722786.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae MLV-016] gi|225855809|ref|YP_002737320.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae P1031] gi|307066702|ref|YP_003875668.1| cytosine/adenosine deaminase [Streptococcus pneumoniae AP200] gi|14971484|gb|AAK74212.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae TIGR4] gi|147756999|gb|EDK64038.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP11-BS70] gi|147764516|gb|EDK71446.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP19-BS75] gi|183573448|gb|EDT93976.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae CDC0288-04] gi|183577431|gb|EDT97959.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae MLV-016] gi|225725405|gb|ACO21257.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae P1031] gi|306408239|gb|ADM83666.1| Cytosine/adenosine deaminase [Streptococcus pneumoniae AP200] gi|332077311|gb|EGI87772.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Streptococcus pneumoniae GA41301] gi|332201950|gb|EGJ16019.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Streptococcus pneumoniae GA41317] Length = 155 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/151 (41%), Positives = 84/151 (55%), Gaps = 4/151 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LS+E +D L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 65 DAN--LSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYNILT 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 123 DERLNHRVEVEIGILEDECAAIMQDFFRNRR 153 >gi|146329465|ref|YP_001209489.1| adenosine deaminase [Dichelobacter nodosus VCS1703A] gi|146232935|gb|ABQ13913.1| adenosine deaminase [Dichelobacter nodosus VCS1703A] Length = 157 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 58/144 (40%), Positives = 82/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+AQ AA EIP+GAV V ++I+ NR D +AH+EIL +R G + + Sbjct: 6 FMRLALEQAQLAAEIGEIPIGAVLVYQQQVIAANFNRTISACDPSAHSEILVLREGAQRI 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC-HHS 125 L E+ LYVT+EPC MC A+ ARI +L +GA N +GG + A HH Sbjct: 66 KNYRLTEMALYVTVEPCVMCVGALIHARIEKLVFGAYNARGGACGSSFDLTRHAQLNHHI 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + ++Q FF++RR Sbjct: 126 NEVKGGVLAAECQLLLQQFFQKRR 149 >gi|257094052|ref|YP_003167693.1| CMP/dCMP deaminase zinc-binding [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046576|gb|ACV35764.1| CMP/dCMP deaminase zinc-binding [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 153 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL AQ A E+PVGA+ V + I+ R N D TAHAEI A+R R L Sbjct: 6 FMREALSLAQAAECLGEVPVGALVVRDGVIVGRGFNSPIGEHDPTAHAEIAALRDAARTL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP +L+VTLEPC MCA A+ AR+ RL YGA +PK G + + + +H Sbjct: 66 RNYRLPGCELFVTLEPCAMCAGAMLQARLARLVYGARDPKTGVHGSVVDLFAVGRLNHHT 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ +++ DFF RR Sbjct: 126 QVVGGVLAAECGRLLSDFFAARR 148 >gi|297627118|ref|YP_003688881.1| CMP/dCMP deaminase, zinc-binding [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922883|emb|CBL57463.1| CMP/dCMP deaminase, zinc-binding [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 159 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/128 (42%), Positives = 72/128 (56%), Gaps = 1/128 (0%) Query: 23 EIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 ++PVGAV + N ++ GNR + D TAHAE+LAIR C L + L VTLE Sbjct: 32 DVPVGAVVLDGNGVLLGEGGNRREQDGDATAHAEVLAIRAACARRGAWRLDDCTLVVTLE 91 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PCTMCA A+ ARIRRL +GA +PK G I + +H E+ GI ++++ Sbjct: 92 PCTMCAGALVNARIRRLVFGAFDPKAGAIASLWDVVRDPRLNHRVEVVGGIMADDCQRVL 151 Query: 142 QDFFKERR 149 DFF RR Sbjct: 152 TDFFATRR 159 >gi|315125849|ref|YP_004067852.1| tRNA-specific adenosine deaminase [Pseudoalteromonas sp. SM9913] gi|315014363|gb|ADT67701.1| tRNA-specific adenosine deaminase [Pseudoalteromonas sp. SM9913] Length = 168 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A +EIPVGA+ V +N++IS NR+ D +AHAE++A+R ++L Sbjct: 10 WMEQALVYAKQAEQLDEIPVGAIIVKDNQLISAGYNRSITDNDPSAHAEMIAVREAGKVL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC+MCA + +RI+RL +GA++ K G + +H Sbjct: 70 NNYRLIDCTLYVTLEPCSMCAGLLVHSRIKRLVFGAADAKTGSAGSIMNLLQEPRLNHQV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ E + + I FFK RR Sbjct: 130 EITGGVLETQCAETISSFFKRRR 152 >gi|94266763|ref|ZP_01290431.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta proteobacterium MLMS-1] gi|94270234|ref|ZP_01291686.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta proteobacterium MLMS-1] gi|93450891|gb|EAT01904.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta proteobacterium MLMS-1] gi|93452585|gb|EAT03162.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta proteobacterium MLMS-1] Length = 156 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 53/129 (41%), Positives = 77/129 (59%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVLNNKIISRA-GNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGA+ V + + A GNR E D AHAEI+ +R +L+ LP LYVTL Sbjct: 25 GEVPVGALLVAADATVLVADGNRTIEYCDPAAHAEIVVLRRAAALLANHRLPGATLYVTL 84 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A+ ARI RL YGA++PK G I++ Q + +H E+ G+ + + Sbjct: 85 EPCVMCAGALIQARIERLVYGAADPKAGAIDSLFQLAADSRLNHRFEVDSGVLAEECGLL 144 Query: 141 IQDFFKERR 149 ++DFF+++R Sbjct: 145 LRDFFRQKR 153 >gi|332534515|ref|ZP_08410352.1| tRNA-specific adenosine-34 deaminase [Pseudoalteromonas haloplanktis ANT/505] gi|332036083|gb|EGI72560.1| tRNA-specific adenosine-34 deaminase [Pseudoalteromonas haloplanktis ANT/505] Length = 171 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 84/143 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A L +EIPVGA+ V +N++IS NR+ D +AHAE++A+R ++L Sbjct: 10 WMEQALLYAKQAELLDEIPVGAIVVKDNQLISVGYNRSITDNDPSAHAEMIAVREAGKVL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC+MCA + +RI+RL +GA + K G + +H Sbjct: 70 NNYRLIDCTLYVTLEPCSMCAGLLVHSRIKRLVFGALDAKTGSAGSIMNLLQEPRLNHQV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ Q+ I +FFK RR Sbjct: 130 EVCGGVLAQQCGDTISNFFKRRR 152 >gi|220930799|ref|YP_002507708.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulolyticum H10] gi|220001127|gb|ACL77728.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulolyticum H10] Length = 152 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 82/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K FM A+++A+ A E PVGAV V N +II+ NR E DVT+HAEI A++ Sbjct: 4 KNEQFMLAAIQQAKEAYKNGESPVGAVIVKNGEIIAYGCNRREEKLDVTSHAEIEALKKA 63 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L D+YVTLEPC MCA AI +RI+ LY GA + K G + + + Sbjct: 64 AKEIGTWKLDGCDMYVTLEPCPMCAGAIIQSRIKTLYIGAMDKKSGSAGSVVDLFRVPQF 123 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + I+ +FFK+ R Sbjct: 124 NHRVDVVYGLMFEECGTILTEFFKQLR 150 >gi|160947058|ref|ZP_02094225.1| hypothetical protein PEPMIC_00989 [Parvimonas micra ATCC 33270] gi|158446192|gb|EDP23187.1| hypothetical protein PEPMIC_00989 [Parvimonas micra ATCC 33270] Length = 155 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 62/152 (40%), Positives = 85/152 (55%), Gaps = 6/152 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM AL+EA+ A + E+P+G V V ++KI+SR N+ K HAEI+AI Sbjct: 1 MSRDEYFMDIALKEAKKAYNKGEVPIGCVIVKDDKIVSRGHNQVLSKKSGVNHAEIIAIN 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK---GGGIENGTQFY 117 + L L + +L+VTLEPC MCA AI +RI+R+ GA + K G IEN Sbjct: 61 KAGQKLGDFRLEDTELFVTLEPCCMCAGAIVNSRIKRVIIGAMDVKRGFCGSIENVLDRQ 120 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 L +H I G+ EQ+ I+QDFFK R Sbjct: 121 EL---NHRSIIKTGVLEQKCLDILQDFFKNLR 149 >gi|332973009|gb|EGK10948.1| cytidine/deoxycytidylate deaminase [Psychrobacter sp. 1501(2011)] Length = 207 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 77/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALE AQ A + E+PVGAV V II N+ D TAHAEI+A+R C L Sbjct: 57 MQAALELAQQGASKEEVPVGAVLVQEGNIIGEGFNQPILTCDPTAHAEIVALRSACSALE 116 Query: 68 QEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP LYVTLEPCTMC A+ AR+ RL + P+ G + + + +H Sbjct: 117 NYRLPANTTLYVTLEPCTMCLGALIHARLSRLVFATQEPRAGMVGSQLNLVEMDFYNHKI 176 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + S+QI++ FFK RR Sbjct: 177 AVNYGLLQADSQQILKSFFKARR 199 >gi|332289514|ref|YP_004420366.1| tRNA-specific adenosine deaminase [Gallibacterium anatis UMN179] gi|330432410|gb|AEC17469.1| tRNA-specific adenosine deaminase [Gallibacterium anatis UMN179] Length = 153 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A NAA+ EIPVGAV V I++ N++ L D TAHAEI+A+R + L Sbjct: 1 MQYALALADNAAMMGEIPVGAVLVDEQGNIVAEGWNQSITLSDPTAHAEIMALRQAGQKL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI +RI+RL +GAS+ K G I + + +H Sbjct: 61 QNYRLLNLTLYVTLEPCPMCAGAILHSRIKRLVFGASDYKTGAIGSRFHLFEDYRMNHIV 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + I FF++RR Sbjct: 121 EITAGVLAEECSAKISQFFQKRR 143 >gi|124008183|ref|ZP_01692880.1| cytosine deaminase [Microscilla marina ATCC 23134] gi|123986282|gb|EAY26104.1| cytosine deaminase [Microscilla marina ATCC 23134] Length = 154 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/148 (39%), Positives = 83/148 (56%), Gaps = 5/148 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A +EA A + EIPVGAV V+ +KII+RA N+ +L DVTAHAEILA+ L Sbjct: 6 YMQQAYKEAVIAYNKGEIPVGAVVVVQDKIIARAHNQTEQLLDVTAHAEILAVTGAANYL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG-----GIENGTQFYTLAT 121 + L + +YVTLEPC MCA AI+ +++ RL +GA + K G GT Sbjct: 66 GAKYLNQCTMYVTLEPCVMCAGAIAWSQLGRLVFGAYDVKRGFSRIESATEGTNNKVTKL 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H G+ E +++Q FF++ R Sbjct: 126 LHPKTLQVGGVLENECAELLQRFFQKLR 153 >gi|295398379|ref|ZP_06808419.1| cytidine/deoxycytidylate deaminase [Aerococcus viridans ATCC 11563] gi|294973332|gb|EFG49119.1| cytidine/deoxycytidylate deaminase [Aerococcus viridans ATCC 11563] Length = 175 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ AA E+P+GAV V +II R N +D T HAEILAIR R Sbjct: 19 FMEAAIEEAKKAAAIGEVPIGAVVVYQGEIIGRGHNLRETSQDATTHAEILAIREANRNR 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + DLYVTLEPC MC+ A+ +RIR +Y+GA + KGG + +H Sbjct: 79 ASWRLADADLYVTLEPCPMCSGAMIQSRIRHVYFGAYDQKGGTAGTLMNLLDDSRFNHQV 138 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + + ++QDFF E R Sbjct: 139 EVIGGVMHEECKALLQDFFIELR 161 >gi|158522041|ref|YP_001529911.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3] gi|158510867|gb|ABW67834.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3] Length = 146 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 79/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA A +E+PVGAV V + K++S NR D +AHAE+L IR R Sbjct: 1 MELALVEAGKARDMDEVPVGAVLVSPDGKVLSADHNRPIAECDPSAHAEMLVIRRAARQA 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + LP LYVT+EPC MC A+ ARI + +G +PK G + F + +HSP Sbjct: 61 ANYRLPNTTLYVTVEPCVMCMGAVIHARIGTVVFGVHDPKWGAAGSLYDFTKHSALNHSP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E R I+Q FF++RR Sbjct: 121 AVVAGVCEDACRSILQAFFEQRR 143 >gi|28377565|ref|NP_784457.1| cytosine/adenosine deaminase [Lactobacillus plantarum WCFS1] gi|254555738|ref|YP_003062155.1| cytosine/adenosine deaminase [Lactobacillus plantarum JDM1] gi|300769759|ref|ZP_07079641.1| possible guanine deaminase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|28270397|emb|CAD63300.1| cytosine/adenosine deaminase [Lactobacillus plantarum WCFS1] gi|254044665|gb|ACT61458.1| cytosine/adenosine deaminase [Lactobacillus plantarum JDM1] gi|300492667|gb|EFK27853.1| possible guanine deaminase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 168 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/140 (38%), Positives = 80/140 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA+ A L E+P+GAV V +II R N +D T HAEI+AI+ C L Sbjct: 9 WMQEALHEARMAYLIGEVPIGAVIVHQGEIIGRGHNLREHGQDATMHAEIIAIQEACEYL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MC+ AI AR+ LY+GA +PK G + + Q +H Sbjct: 69 HSWRLADCQLYVTLEPCLMCSGAIINARLPELYFGARDPKAGAVRSLYQVMDDTRLNHQV 128 Query: 127 EIYPGISEQRSRQIIQDFFK 146 ++ I + + +++++FF+ Sbjct: 129 TVHERILARPAGEMLENFFR 148 >gi|293379949|ref|ZP_06626050.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus crispatus 214-1] gi|290923462|gb|EFE00364.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus crispatus 214-1] Length = 156 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 83/143 (58%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRIL 66 M A+++A+ A + E+P+GAV V + + G REL +D T HAE++AI+ C L Sbjct: 1 MQLAIDQAKEAEKQGEVPIGAVVVDPDGRVVGTGYNRRELDEDATQHAEMIAIKEACSKL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + +++ +H P Sbjct: 61 GMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFSVEKFNHHP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ + Q+++DFF+ R Sbjct: 121 HAIRGLYRDQCAQMLKDFFRAIR 143 >gi|329298459|ref|ZP_08255795.1| CMP/dCMP deaminase zinc-binding protein [Plautia stali symbiont] Length = 164 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALE A+ A + E+PVGAV V +++I NR D TAHAEI+A+R G +++ Sbjct: 9 WMRHALELARRAWEQGEVPVGAVLVQGDRVIGEGWNRPISQCDPTAHAEIMALRQGGKVI 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI RL YGA + K G + +H Sbjct: 69 DNYRLLDTTLYVTLEPCVMCAGAMVHSRITRLVYGAKDEKTGAAGSLLDVIGHPGMNHQI 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ ++ DFF+ RR Sbjct: 129 EIAHGVLAGECATLLSDFFRMRR 151 >gi|167629244|ref|YP_001679743.1| cytidine and deoxycytidylate deaminase zinc-binding region protein, putative [Heliobacterium modesticaldum Ice1] gi|167591984|gb|ABZ83732.1| cytidine and deoxycytidylate deaminase zinc-binding region protein, putative [Heliobacterium modesticaldum Ice1] Length = 152 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/145 (39%), Positives = 81/145 (55%), Gaps = 4/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEE + A + E+P+G V V + ++I R N K+ AHAE+LAI+ + Sbjct: 8 FMGLALEEGRQAYAKGEVPIGCVIVKDGEVIGRGHNLRETEKNPVAHAEVLAIQDAANRI 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CHH 124 L LYVT+EPC MCA AI LARI R+ + +PKGG GT F L + +H Sbjct: 68 GGWRLAGATLYVTVEPCPMCAGAIVLARIPRVVFAVMDPKGGA--AGTCFNILESPWTNH 125 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + G+ E +R+++Q FF+ R Sbjct: 126 RVSVISGVREGEARELMQSFFQRLR 150 >gi|326564207|gb|EGE14443.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis 12P80B1] Length = 184 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M+ ALE A+ A EIPVGAV V +I+ N +D TAHAEI+A+R C L+ Sbjct: 32 MNHALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRACETLN 91 Query: 68 QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP+ LYVTLEPCTMC A+ ARI R+ +GA PK G + + + +H Sbjct: 92 NYRLPKGCILYVTLEPCTMCFGALIHARISRVVFGAFEPKAGVVVSQLKLPEQVFYNHHL 151 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +Y G+ +S ++ FF++RR Sbjct: 152 SVYGGLLADKSSALLSGFFRQRR 174 >gi|227112728|ref|ZP_03826384.1| tRNA-specific adenosine deaminase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 168 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/149 (40%), Positives = 78/149 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M AL AQ A E+PVGAV VL+N+ I NR D TAHAEI+A+R Sbjct: 4 LRNDEYWMRHALMLAQRAQDEGEVPVGAVLVLDNEAIGEGWNRPIGHHDPTAHAEIMALR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 G ++L L E LYVTLEPC MCA A+ +RI RL YGAS+ K G + Sbjct: 64 QGGQVLQNYRLLETTLYVTLEPCIMCAGAMVHSRIGRLVYGASDEKTGAAGSLVDILRHP 123 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I GI + FF+ RR Sbjct: 124 GMNHQIVIESGILADECSATLSTFFRLRR 152 >gi|291549089|emb|CBL25351.1| Cytosine/adenosine deaminases [Ruminococcus torques L2-14] Length = 163 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/149 (37%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL++A+ A E P+G V V +KII+R NR K+ AHAE+ AI+ Sbjct: 1 MTTDEKYMRAALKQAEKAYNLGETPIGCVIVHEDKIIARGYNRRNTDKNPLAHAEVAAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L E LYVTLEPC MCA AI +RI R+ G NPK G + + Sbjct: 61 KASKKLGDWRLEECTLYVTLEPCQMCAGAIVQSRIPRVVVGCMNPKAGCTGSILNLLDIQ 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E+ Q+++ FF+E R Sbjct: 121 AFNHQADLTTGVLEEECSQLMKQFFRELR 149 >gi|317120920|ref|YP_004100923.1| tRNA-adenosine deaminase [Thermaerobacter marianensis DSM 12885] gi|315590900|gb|ADU50196.1| tRNA-adenosine deaminase [Thermaerobacter marianensis DSM 12885] Length = 207 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/128 (43%), Positives = 73/128 (57%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAVAV + +II+R N L D TAHAEIL +R L L V LYVTLE Sbjct: 63 GEVPVGAVAVHDGRIIARGHNLRERLGDPTAHAEILVLREAAARLGGWRLEGVTLYVTLE 122 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI LAR+ RL YGA +PK G + +H E+ G+ + S ++ Sbjct: 123 PCPMCAGAIVLARVPRLVYGAPDPKAGAAGSLMNLVQHDKLNHRVELRAGVLAEASAALL 182 Query: 142 QDFFKERR 149 + FF++ R Sbjct: 183 RGFFRQLR 190 >gi|288906283|ref|YP_003431505.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus gallolyticus UCN34] gi|306832338|ref|ZP_07465492.1| tRNA-specific adenosine deaminase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325979296|ref|YP_004289012.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288733009|emb|CBI14590.1| putative cytidine/deoxycytidylate deaminase family protein [Streptococcus gallolyticus UCN34] gi|304425777|gb|EFM28895.1| tRNA-specific adenosine deaminase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325179224|emb|CBZ49268.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 168 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EAQ + + EIP+G V V N II R N E + HAEI+AI Sbjct: 12 FMREALKEAQKSLAKEEIPIGCVIVKNGVIIGRGHNAREERQKAILHAEIMAIDDANENE 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LARI ++ YGA+N K GG + T +H Sbjct: 72 GSWRLLDSTLFVTIEPCVMCSGAIGLARIPQVIYGAANQKFGGAGSLYDILTDVRLNHRV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI E I+QDFF++ R Sbjct: 132 EVETGILETECAAIMQDFFRKNR 154 >gi|297170608|gb|ADI21634.1| cytosine/adenosine deaminases [uncultured myxobacterium HF0130_06F04] Length = 159 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/151 (37%), Positives = 83/151 (54%), Gaps = 4/151 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A EA+ A E+PVGA+ + ++++ R NR D AHAEILAI Sbjct: 1 MGRDESWMQAAFAEAEKARALGEVPVGALVIYEDRVVGRGFNRRETDHDPLAHAEILAIG 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + L +LYVTLEPC MCA AI +R+ RL +GA++P+ G GT F + Sbjct: 61 EAAKTLGRWRLSGCELYVTLEPCPMCAGAIVNSRLDRLVFGATDPRAGAA--GTVFDIVR 118 Query: 121 T--CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + +I+ DFF + R Sbjct: 119 DQRLNHQVEVVSGVLGEPCSRILSDFFADLR 149 >gi|166368572|ref|YP_001660845.1| cytidine and deoxycytidylate deaminase [Microcystis aeruginosa NIES-843] gi|166090945|dbj|BAG05653.1| cytidine and deoxycytidylate deaminase [Microcystis aeruginosa NIES-843] Length = 162 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/144 (40%), Positives = 80/144 (55%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL A A R ++PVGAV V +I++ N + D TAHAEILAIR ++ Sbjct: 19 WMQLALNLAATAGDRGDVPVGAVIVDKQGHLIAQGANCKEKHHDPTAHAEILAIRAASQV 78 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + LYVTLEPC MCA AI AR+ L YGA +PK G I F +H Sbjct: 79 LGNWHLNDCTLYVTLEPCPMCAGAIIQARLGLLVYGADDPKTGVIRTVANFIDSPFSNHR 138 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI + S +++Q +F+++R Sbjct: 139 LPVIAGILAKESGELLQTWFEKKR 162 >gi|313826960|gb|EFS64674.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL063PA1] Length = 149 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 80/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL+ A+ AA R ++P+GAV + N +++S AGN D TAHAE+LAIR Sbjct: 1 MTQALDVARRAATRGDVPIGAVILGANGEVLSEAGNERERTGDPTAHAEVLAIRRAAEAR 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPCTMCA I ARI R+ +GA +PK G + + H P Sbjct: 61 DGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDPKAGAVSSLFDAMRDPRLPHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + S ++++FF R Sbjct: 121 KVVTGVMAEESSALLREFFDGHR 143 >gi|253689423|ref|YP_003018613.1| CMP/dCMP deaminase zinc-binding [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756001|gb|ACT14077.1| CMP/dCMP deaminase zinc-binding [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 165 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/149 (40%), Positives = 78/149 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL AQ A E+PVGAV VL+N+ I NR D TAHAEI+A+R Sbjct: 1 MSNDEYWMRYALTLAQRAQDEGEVPVGAVLVLDNEAIGEGWNRPIGHHDPTAHAEIMALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 G ++L L + LYVTLEPC MCA A+ +RI RL YGAS+ K G + Sbjct: 61 QGGQVLQNYRLLDTTLYVTLEPCIMCAGAMIHSRIGRLVYGASDEKTGAAGSLVDILRHP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I GI + + FF+ RR Sbjct: 121 GMNHQIVIESGILAEECSATLSAFFRLRR 149 >gi|315180919|gb|ADT87833.1| zinc-binding domain protein [Vibrio furnissii NCTC 11218] Length = 189 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ A+ A E+PVGAV V + II+ NR+ D TAHAEI +R L Sbjct: 15 FMRRAMALAEQAEAEGEVPVGAVLVKDGHIIAEGWNRSIGACDATAHAEIQVLRQAGEAL 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LYVTLEPC MCA A+ +R++R+ YGA + K G ++ +H Sbjct: 75 HNYRLLETTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAAYHYA 134 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E RQ +Q FF+ RR Sbjct: 135 TVEKGLLEDECRQQLQAFFQRRR 157 >gi|260776578|ref|ZP_05885473.1| tRNA-specific adenosine-34 deaminase [Vibrio coralliilyticus ATCC BAA-450] gi|260607801|gb|EEX34066.1| tRNA-specific adenosine-34 deaminase [Vibrio coralliilyticus ATCC BAA-450] Length = 169 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E A A E+PVGAV V +I++ N++ D TAHAE+ +R ++L Sbjct: 13 FMRRAMELAAQAEAEGEVPVGAVLVKGGEIVAEGWNQSIGHHDATAHAEMQVLRKAGQVL 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +R++R+ YGA + K G + +H Sbjct: 73 ENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLNLFEHQAAYHYA 132 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ E+ R +Q FFK RR Sbjct: 133 DIEQGLMEEECRGQLQAFFKRRR 155 >gi|257464722|ref|ZP_05629093.1| tRNA-adenosine deaminase [Actinobacillus minor 202] gi|257450382|gb|EEV24425.1| tRNA-adenosine deaminase [Actinobacillus minor 202] Length = 150 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 64/143 (44%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A EIPVGAV V + KI+ NR+ L D TAHAEI AIRM + L Sbjct: 1 MQYALSLADKAEQEGEIPVGAVLVDKSGKIVGEGWNRSIILSDPTAHAEIQAIRMAGQHL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI +RI RL +GAS+ K G I + + +H Sbjct: 61 QNYRLLDTTLYVTLEPCPMCAGAILHSRIGRLVFGASDYKTGAIGSRFHLFEDYKMNHFL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ Q I FFK+RR Sbjct: 121 QIRGGVMRDECSQKISAFFKKRR 143 >gi|229545278|ref|ZP_04434003.1| nucleoside deaminase [Enterococcus faecalis TX1322] gi|229309628|gb|EEN75615.1| nucleoside deaminase [Enterococcus faecalis TX1322] Length = 173 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA+ A E+P+GAV V +II R N ++ TAHAE+ AI+ CR + Sbjct: 16 FMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACRGI 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E L+VTLEPC MC+ A+ LARI +YYGA++PK G +H Sbjct: 76 ENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVA 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R ++ FFK R Sbjct: 136 YVEAGVLEEECRLLLVQFFKRLR 158 >gi|153207852|ref|ZP_01946429.1| tRNA-specific adenosine deaminase [Coxiella burnetii 'MSU Goat Q177'] gi|154706920|ref|YP_001424041.1| tRNA-specific adenosine deaminase [Coxiella burnetii Dugway 5J108-111] gi|161830554|ref|YP_001596549.1| tRNA-specific adenosine deaminase [Coxiella burnetii RSA 331] gi|165918843|ref|ZP_02218929.1| tRNA-specific adenosine deaminase [Coxiella burnetii RSA 334] gi|212212896|ref|YP_002303832.1| tRNA-specific adenosine deaminase [Coxiella burnetii CbuG_Q212] gi|212219141|ref|YP_002305928.1| tRNA-specific adenosine deaminase [Coxiella burnetii CbuK_Q154] gi|215919009|ref|NP_819652.2| zinc-binding domain-containing protein [Coxiella burnetii RSA 493] gi|120576278|gb|EAX32902.1| tRNA-specific adenosine deaminase [Coxiella burnetii 'MSU Goat Q177'] gi|154356206|gb|ABS77668.1| tRNA-specific adenosine deaminase [Coxiella burnetii Dugway 5J108-111] gi|161762421|gb|ABX78063.1| tRNA-specific adenosine deaminase [Coxiella burnetii RSA 331] gi|165917475|gb|EDR36079.1| tRNA-specific adenosine deaminase [Coxiella burnetii RSA 334] gi|206583894|gb|AAO90166.2| tRNA-specific adenosine deaminase [Coxiella burnetii RSA 493] gi|212011306|gb|ACJ18687.1| tRNA-specific adenosine deaminase [Coxiella burnetii CbuG_Q212] gi|212013403|gb|ACJ20783.1| tRNA-specific adenosine deaminase [Coxiella burnetii CbuK_Q154] Length = 148 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 80/144 (55%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FM AL A+ A NE+P+GAV V N+I+ N L D TAHAEILA+R + Sbjct: 5 LFMHEALALAKKANENNEVPIGAVLVKENEIVGHGFNEPITLNDPTAHAEILALRNAAKR 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L + LYVTLEPC MC A+ ARI+RL +GA +P+ G +E+ Q +H Sbjct: 65 VGNYRLVDTTLYVTLEPCAMCVGAMIQARIKRLVFGAFDPRAGAVESVFQLLNEPRLNHR 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 G+ + + ++ FF+ RR Sbjct: 125 IVWTSGVIAEACAEPLKAFFRARR 148 >gi|148262140|ref|YP_001228846.1| CMP/dCMP deaminase, zinc-binding [Geobacter uraniireducens Rf4] gi|146395640|gb|ABQ24273.1| tRNA-adenosine deaminase [Geobacter uraniireducens Rf4] Length = 176 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ EA+ AA R E+P+GAV V + KIISR N +D AHAE++AIR + L Sbjct: 25 WMGSAIREAEKAAERGEVPIGAVIVRDGKIISRGYNLREGKQDPAAHAELIAIRKAAKKL 84 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MC AI LAR+ ++ +G +PKGG + +H Sbjct: 85 GNWRLAGTTLYVTLEPCIMCMGAILLARVEKVVFGCYDPKGGAAGSLYDLSDDKRLNHRV 144 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI + ++ FF R Sbjct: 145 TLVAGIRQAECAALLSGFFAALR 167 >gi|331265454|ref|YP_004325084.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus oralis Uo5] gi|326682126|emb|CBY99742.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus oralis Uo5] Length = 155 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/145 (42%), Positives = 82/145 (56%), Gaps = 4/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ A +EIP+G V V + +II R N EL+ HAEI+AI L Sbjct: 11 FMREALKEAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIENAN--L 68 Query: 67 SQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 S+E +D L+VT+EPC MC+ AI LARI ++ YGA N K G + T +H Sbjct: 69 SEESWRLLDCTLFVTIEPCVMCSGAIGLARIPKVVYGAKNQKFGAAGSLYDILTDERLNH 128 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E I+QDFF+ RR Sbjct: 129 RVEVETGVLESECAAIMQDFFRNRR 153 >gi|315222391|ref|ZP_07864296.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus anginosus F0211] gi|315188552|gb|EFU22262.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus anginosus F0211] Length = 155 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ A +EIP+G V V + KII N EL+ HAE++AI Sbjct: 11 FMLEALKEAEIALANDEIPIGCVIVKDGKIIGHGHNAREELQRAVMHAEVMAIEEANAYE 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LARI ++ YGA N K G + T +H Sbjct: 71 KSWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIYGAKNQKFGAAGSLYDILTDERLNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI E Q++QDFF++RR Sbjct: 131 ELENGILEAECAQMMQDFFRKRR 153 >gi|332754092|gb|EGJ84463.1| tRNA-specific adenosine deaminase [Shigella flexneri 4343-70] Length = 178 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 22 WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + + +H Sbjct: 82 QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAVGSLMDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI ++ DFF+ RR Sbjct: 142 EITEGILADECAALLSDFFRMRR 164 >gi|326560462|gb|EGE10844.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis 7169] Length = 159 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M+ ALE A+ A EIPVGAV V +I+ N +D TAHAEI+A+R C L+ Sbjct: 7 MNHALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRACETLN 66 Query: 68 QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP+ LYVTLEPCTMC A+ ARI R+ +GA PK G + + + +H Sbjct: 67 NYRLPKGCILYVTLEPCTMCFGALIHARISRVVFGAFEPKAGVVVSQLKLPEQVFYNHHL 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +Y G+ +S ++ FF++RR Sbjct: 127 SVYGGLLADKSSALLSGFFRQRR 149 >gi|322391142|ref|ZP_08064614.1| tRNA-specific adenosine deaminase [Streptococcus peroris ATCC 700780] gi|321145895|gb|EFX41284.1| tRNA-specific adenosine deaminase [Streptococcus peroris ATCC 700780] Length = 166 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/151 (40%), Positives = 84/151 (55%), Gaps = 4/151 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V + KII R N EL+ HAEI+AI Sbjct: 16 LEEKEAFMREALKEAEIALEHDEIPIGCVIVKDGKIIGRGHNAREELQRAVMHAEIMAIE 75 Query: 61 MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LS+E +D L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 76 DAN--LSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILT 133 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E I+QDFF+ RR Sbjct: 134 DERLNHRVDVETGVLESECAAIMQDFFRNRR 164 >gi|315146338|gb|EFT90354.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX4244] Length = 173 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA+ A E+P+GAV V +II R N + TAHAE+ AI+ CR + Sbjct: 16 FMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARHEATAHAEMYAIQEACRGI 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E L+VTLEPC MC+ A+ LARI +YYGA++PK G +H Sbjct: 76 ENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVA 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R ++ FFK+ R Sbjct: 136 YVEAGVLEEECRLLLVQFFKKLR 158 >gi|260771319|ref|ZP_05880245.1| tRNA-specific adenosine-34 deaminase [Vibrio furnissii CIP 102972] gi|260613635|gb|EEX38828.1| tRNA-specific adenosine-34 deaminase [Vibrio furnissii CIP 102972] Length = 189 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ A+ A E+PVGAV V + II+ NR+ D TAHAEI +R L Sbjct: 15 FMRRAMALAEQAEAEGEVPVGAVLVKDGHIIAEGWNRSIGACDATAHAEIQVLRQAGEAL 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LYVTLEPC MCA A+ +R++R+ YGA + K G ++ +H Sbjct: 75 HNYRLLETTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAAYHYA 134 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E RQ +Q FF+ RR Sbjct: 135 TVEKGLLEDECRQQLQAFFQRRR 157 >gi|255067649|ref|ZP_05319504.1| tRNA-specific adenosine deaminase [Neisseria sicca ATCC 29256] gi|255048123|gb|EET43587.1| tRNA-specific adenosine deaminase [Neisseria sicca ATCC 29256] Length = 243 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ +A EIPVGAV V NN+II+ A N D++ HAEI A+ L Sbjct: 98 FMRAALTQAEQSASIGEIPVGAVVVSNNQIIAAAHNTCVSDHDISRHAEIRALAAAGAAL 157 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L DLY+TLEPC MCA+AI AR+RR+ YGA+ PK G + + + Sbjct: 158 QNYRLDGCDLYITLEPCAMCASAIIQARVRRVIYGAAEPKTGAAGSVVNLFANPLLNKHT 217 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI E + ++Q FF+ RR Sbjct: 218 AIKGGILEDECKAVLQAFFQTRR 240 >gi|51597197|ref|YP_071388.1| tRNA-specific adenosine deaminase [Yersinia pseudotuberculosis IP 32953] gi|186896294|ref|YP_001873406.1| tRNA-specific adenosine deaminase [Yersinia pseudotuberculosis PB1/+] gi|51590479|emb|CAH22119.1| putative zinc-binding protein [Yersinia pseudotuberculosis IP 32953] gi|186699320|gb|ACC89949.1| CMP/dCMP deaminase zinc-binding [Yersinia pseudotuberculosis PB1/+] Length = 187 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A A E+PVGAV VL NK+I NR D TAHAEI+A+R G + + Sbjct: 28 WMRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQGGQAV 87 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + +H Sbjct: 88 QNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGMNHQI 147 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI + FF++RR Sbjct: 148 EVSAGILATACSHQLSAFFRQRR 170 >gi|307706899|ref|ZP_07643700.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK321] gi|307617691|gb|EFN96857.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK321] Length = 155 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL EA+ A +EIP+G V V +II R N EL+ HAEI+AI Sbjct: 5 VEEKEVFMREALREAEIALEHDEIPIGCVIVKEGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LS+E +D L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 65 NAN--LSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILT 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 123 DERLNHRVEVETGILEDECAAIMQDFFRNRR 153 >gi|289166926|ref|YP_003445193.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus mitis B6] gi|288906491|emb|CBJ21321.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus mitis B6] Length = 155 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL EA A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 VEEKEVFMREALREADIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LS+E +D L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 65 NAN--LSEESWRLIDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILT 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ GI E I+QDFF+ RR Sbjct: 123 DERLNHRVDVETGILEDECAAIMQDFFRNRR 153 >gi|254412813|ref|ZP_05026586.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Microcoleus chthonoplastes PCC 7420] gi|196180548|gb|EDX75539.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Microcoleus chthonoplastes PCC 7420] Length = 186 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 84/149 (56%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 +K +M+ +L AQ+A E+PVGAV + N + +I+ NR +D TAHAEILA+R Sbjct: 11 QKHRHWMNRSLAIAQSAGEAGEVPVGAVIIDNQDNLIATGENRRERDRDPTAHAEILALR 70 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L+ L LYVTLEPC MC+ AI LAR+ L YGA +PK G I A Sbjct: 71 AAGQALNTWHLNTCTLYVTLEPCAMCSGAIILARLGLLVYGADDPKTGTIRTVANSPDSA 130 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E R+ ++ +F +RR Sbjct: 131 YSNHRLPVLAGIMETECREYLKSWFAQRR 159 >gi|187776528|ref|ZP_02993001.1| hypothetical protein CLOSPO_00031 [Clostridium sporogenes ATCC 15579] gi|187775187|gb|EDU38989.1| hypothetical protein CLOSPO_00031 [Clostridium sporogenes ATCC 15579] Length = 148 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 7/148 (4%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N ++ A+ EA+ A E+PVGAV V NKII+++ N ELKD TAHAE+LAI+ C+ Sbjct: 2 NSYIEYAIIEAKKALAIGEVPVGAVIVKENKIIAKSHNLKEELKDPTAHAEVLAIKKACK 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFYTLAT 121 IL L +YVTLEPC MCA+AI +RI L+ G +P GG + N T L + Sbjct: 62 ILGNWRLKGCKMYVTLEPCAMCASAIIQSRISELHIGTFDPVGGACGSVVNITNNSYLKS 121 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +Y +II +FF+ R Sbjct: 122 NLTIKWLY----NDECSKIITNFFQNIR 145 >gi|251794142|ref|YP_003008873.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2] gi|247541768|gb|ACS98786.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2] Length = 156 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 52/148 (35%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A+EEA+ A E+P+GA+ V N +++ R N D TAHAE++AIR Sbjct: 5 QEDQAWMQLAIEEAKKAEQIGEVPIGAILVKNGEVVGRGYNLRETNHDPTAHAEMVAIRE 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C L L + LYVTLEPC MCA AI +R++R+ YG +PK G Sbjct: 65 ACERLGAWRLLDCTLYVTLEPCPMCAGAIVQSRVKRVVYGTGDPKAGCAGTLMNLLQEPR 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + +++ +FF+ R Sbjct: 125 FNHETELTSGVLQAECAELLTNFFRNLR 152 >gi|226226900|ref|YP_002761006.1| putative deaminase [Gemmatimonas aurantiaca T-27] gi|226090091|dbj|BAH38536.1| putative deaminase [Gemmatimonas aurantiaca T-27] Length = 144 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/128 (45%), Positives = 72/128 (56%), Gaps = 2/128 (1%) Query: 24 IPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 +PVGAV + +II RA NR R D TAHAE+LA+R RI L E L VTLE Sbjct: 17 VPVGAVVMRTETGEIIVRAQNRMRRDGDATAHAEVLALREAARIAGDARLGEFTLVVTLE 76 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI LARI L +GA + K G + A +H P + G+ E +R ++ Sbjct: 77 PCAMCAGAIVLARIGALAFGAWDEKAGMCGSVGDIVRHARLNHRPAVQGGVLESENRALL 136 Query: 142 QDFFKERR 149 Q FF ERR Sbjct: 137 QQFFAERR 144 >gi|170023497|ref|YP_001720002.1| tRNA-specific adenosine deaminase [Yersinia pseudotuberculosis YPIII] gi|169750031|gb|ACA67549.1| CMP/dCMP deaminase zinc-binding [Yersinia pseudotuberculosis YPIII] Length = 187 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A A E+PVGAV VL NK+I NR D TAHAEI+A+R G + + Sbjct: 28 WMRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQGGQAV 87 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + +H Sbjct: 88 QNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGMNHQI 147 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI + FF++RR Sbjct: 148 EVSAGILATACSHQLSAFFRQRR 170 >gi|161506947|ref|YP_001576901.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Lactobacillus helveticus DPC 4571] gi|160347936|gb|ABX26610.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lactobacillus helveticus DPC 4571] Length = 168 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 82/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+++A+ A + E+P+GAV V K+I NR +D T HAE++AI+ C Sbjct: 10 YMELAIDQAKEAEKQGEVPIGAVVVDPEGKVIGTGYNRRELDEDSTQHAEMIAIKEACHN 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + + + +H Sbjct: 70 LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKNVYFGALDPKAGACGSVVDLFEVEKFNHH 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P G+ + Q+++DFF+ R Sbjct: 130 PHSIRGLYRDQCAQMLKDFFRAIR 153 >gi|119485470|ref|ZP_01619798.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lyngbya sp. PCC 8106] gi|119457226|gb|EAW38352.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lyngbya sp. PCC 8106] Length = 161 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/144 (41%), Positives = 79/144 (54%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M ALE A++A E+PVGAV + ++++ A NR D TAHAEIL +R + Sbjct: 10 WMKRALELARSAGEAGEVPVGAVIINPQGQLLAEAENRRERDNDPTAHAEILVLRQAGQK 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + LYVTLEPC MCA AI ARI+ L YG +PK G I A H Sbjct: 70 LKDWHLNQCTLYVTLEPCPMCAGAIVQARIQLLVYGVDDPKTGTIRTVANIPDSAYSFHR 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 ++ GI E RQ +Q +F +RR Sbjct: 130 LQVLGGILESACRQQLQSWFAQRR 153 >gi|54307981|ref|YP_129001.1| putative cytosine/adenosine deaminase [Photobacterium profundum SS9] gi|46912407|emb|CAG19199.1| Putative cytosine/adenosine deaminase [Photobacterium profundum SS9] Length = 171 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+E A A E+PVGAV V N +++ NR+ D TAHAE++A+R +++ Sbjct: 13 YMRRAIELASQAEAEGEVPVGAVVVYNGQVVGEGWNRSIGQHDATAHAEMMALRQAGKVV 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI ++ +GAS+ K G + + +H Sbjct: 73 QNYRLLDATLYVTLEPCPMCAGAMVHSRIGKVIFGASDLKTGAAGSVMNLLSYDEVNHHV 132 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ R +Q FFK RR Sbjct: 133 DCQSGVLDEECRAQLQAFFKRRR 155 >gi|153948638|ref|YP_001400126.1| tRNA-specific adenosine deaminase [Yersinia pseudotuberculosis IP 31758] gi|152960133|gb|ABS47594.1| tRNA-specific adenosine deaminase [Yersinia pseudotuberculosis IP 31758] Length = 200 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A A E+PVGAV VL NK+I NR D TAHAEI+A+R G + + Sbjct: 41 WMRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQGGQAV 100 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + +H Sbjct: 101 QNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGMNHQI 160 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI + FF++RR Sbjct: 161 EVSAGILATACSHQLSAFFRQRR 183 >gi|326798488|ref|YP_004316307.1| CMP/dCMP deaminase zinc-binding protein [Sphingobacterium sp. 21] gi|326549252|gb|ADZ77637.1| CMP/dCMP deaminase zinc-binding protein [Sphingobacterium sp. 21] Length = 156 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 82/145 (56%), Gaps = 9/145 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EAQ A +E+P+GAV V + KII+R N L DVTAHAE+ A + Sbjct: 18 FMKEALREAQKAFDADEVPIGAVIVHDGKIIARGHNLTETLNDVTAHAEMQAFTAAANYI 77 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CHH 124 + L + LYVT+EPC MCA A ++I+R+ +GA + K G + T++ H Sbjct: 78 GGKYLKDCTLYVTIEPCVMCAGASYWSQIKRIVFGARDEKRG-------YATISKDIVHP 130 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + GI E+ R+++Q FF+ +R Sbjct: 131 KTTVVSGIMEETCRELMQRFFQLKR 155 >gi|260437836|ref|ZP_05791652.1| tRNA-specific adenosine deaminase [Butyrivibrio crossotus DSM 2876] gi|292809861|gb|EFF69066.1| tRNA-specific adenosine deaminase [Butyrivibrio crossotus DSM 2876] Length = 157 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ +A+ A NE+P+G V V + KII+R NR K AHAEI+AI+ +++ Sbjct: 7 FMKEAIRQAKKAEKLNEVPIGCVIVYDGKIIARGYNRRNTDKSTLAHAEIIAIKRASKVI 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI ARI ++ G N K G + + +H Sbjct: 67 KDWRLEDCTLYVTLEPCQMCAGAIVQARIPKVVIGTMNSKAGCAGSVINVLQMKEFNHQV 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ ++++Q+FF+ R Sbjct: 127 DICKGVLADECKEMMQNFFRNLR 149 >gi|323143534|ref|ZP_08078213.1| cytidine and deoxycytidylate deaminase zinc-binding region [Succinatimonas hippei YIT 12066] gi|322416695|gb|EFY07350.1| cytidine and deoxycytidylate deaminase zinc-binding region [Succinatimonas hippei YIT 12066] Length = 175 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/144 (40%), Positives = 83/144 (57%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FMS AL +A++A EIPVGAV V K I+S NR D AHAEI+A+R +I Sbjct: 9 FMSLALSQARHAWDLGEIPVGAVIVNAAKEIVSVGCNRTIIDNDPCAHAEIVALRNAGKI 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L ++ +YVTLEPC MC+ A+ AR++RL YGA +PK G + + +H Sbjct: 69 LDTYRLTDLTMYVTLEPCCMCSGALIHARLKRLVYGAKDPKTGACGSVFDILIDSRHNHK 128 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E +++ FFK RR Sbjct: 129 IDVEGGVLESSCSDLLKSFFKMRR 152 >gi|320176139|gb|EFW51206.1| tRNA-specific adenosine-34 deaminase [Shigella dysenteriae CDC 74-1112] Length = 178 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 22 WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A++ +RI R+ +GA + K G + +H Sbjct: 82 QNYRLIDATLYVTLEPCVMCAGAMTHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI ++ DFF+ RR Sbjct: 142 EITEGILADECAALLSDFFRMRR 164 >gi|81427949|ref|YP_394948.1| putative cytidine deaminase [Lactobacillus sakei subsp. sakei 23K] gi|78609590|emb|CAI54636.1| Putative cytidine deaminase [Lactobacillus sakei subsp. sakei 23K] Length = 172 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 52/139 (37%), Positives = 76/139 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A++EA A + E+P+GAV V + +II R N +D T HAEI+AI+ C + Sbjct: 11 WMQVAIDEANQARIIGEVPIGAVIVKDGQIIGRGHNIREHAQDATLHAEIIAIQEACMVE 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + ++VTLEPC MCA AI +RI +Y+GAS+PK G T +H Sbjct: 71 KSWRLEDTAIFVTLEPCPMCAGAIINSRIPNVYFGASDPKAGVTGTLMNLLTDKRFNHQA 130 Query: 127 EIYPGISEQRSRQIIQDFF 145 + G+ E ++Q FF Sbjct: 131 TVVAGVREAECAALLQTFF 149 >gi|254786582|ref|YP_003074011.1| cytidine and deoxycytidylate deaminase family protein [Teredinibacter turnerae T7901] gi|237687430|gb|ACR14694.1| cytidine and deoxycytidylate deaminase family protein [Teredinibacter turnerae T7901] Length = 164 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ AL A+ AA + E+PVGAV V + II R N D + HAEI A+R + Sbjct: 8 WMTEALVLAREAAAQGEVPVGAVLVQDGAIIGRGSNNPIGSCDASGHAEICALRDAGQRQ 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP LYVT+EPCTMC AI ARI R+ +GA PK G +E+ + + +H Sbjct: 68 KNYRLPNATLYVTIEPCTMCLGAIVHARIARVVFGAPEPKAGVLESNPELLSAKYFNHEF 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ Q ++IQ FFK RR Sbjct: 128 AWSGGVCAQECSELIQQFFKFRR 150 >gi|256420111|ref|YP_003120764.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588] gi|256035019|gb|ACU58563.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588] Length = 146 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/145 (40%), Positives = 83/145 (57%), Gaps = 7/145 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA+ A E+PVGA+ VL++KII + N+ L D TAHAE+LA+ L Sbjct: 6 YMQQALREARKAFDAGEVPVGAIVVLSDKIIGKGSNQVEMLNDCTAHAEMLALTAAFNYL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC--HH 124 + L E LYVTLEPC MCA A+ ++I R+ Y A + K N + AT H Sbjct: 66 GSKYLMEATLYVTLEPCLMCAGALYWSKIGRIVYAAKDEK-----NSYRRVAGATSPFHP 120 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ G E+ S Q+++ FF++RR Sbjct: 121 KTKVEQGPCEEESLQLVKTFFEQRR 145 >gi|323465896|gb|ADX69583.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lactobacillus helveticus H10] gi|328462872|gb|EGF34721.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Lactobacillus helveticus MTCC 5463] Length = 168 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 82/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+++A+ A + E+P+GAV V K+I NR +D T HAE++AI+ C Sbjct: 10 YMELAIDQAKEAEKQGEVPIGAVVVDPEGKVIGTGYNRRELDEDSTQHAEMIAIKEACHN 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + + + +H Sbjct: 70 LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFEVEKFNHH 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P G+ + Q+++DFF+ R Sbjct: 130 PHSIRGLYRDQCAQMLKDFFRAIR 153 >gi|15601943|ref|NP_245015.1| hypothetical protein PM0078 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720287|gb|AAK02162.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 166 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/144 (41%), Positives = 81/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL A A EIPVGAV V ++ N + D TAHAEI+A+R G + Sbjct: 9 WMRHALRLADKAEQLGEIPVGAVLVDEQGNLLGEGWNLSISESDPTAHAEIVALRQGGQR 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LYVTLEPCTMCA AI +RI+RL +GAS+ K G + + F+ +H+ Sbjct: 69 LQNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAVGSRFHFFDDYKMNHA 128 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 EI G+ ++ Q I FF++RR Sbjct: 129 IEITAGVLQEECSQKISAFFQKRR 152 >gi|154505232|ref|ZP_02041970.1| hypothetical protein RUMGNA_02745 [Ruminococcus gnavus ATCC 29149] gi|153794430|gb|EDN76850.1| hypothetical protein RUMGNA_02745 [Ruminococcus gnavus ATCC 29149] Length = 179 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ +A+ A E+P+G V V +KII R NR K+ AHAE+ AIR Sbjct: 20 MNQDEKYMREAIRQAKKAYALEEVPIGCVIVYQDKIIGRGYNRRTVDKNTLAHAELQAIR 79 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L + +YVTLEPC MC+ AI ARI+R+ G NPK G + + Sbjct: 80 KASKKMDDWRLEDCTMYVTLEPCQMCSGAIVQARIKRVVVGCMNPKAGCAGSILNLLDMK 139 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E++ +++ FFKE R Sbjct: 140 EFNHQVELTTGVLEEQCSGMMKQFFKELR 168 >gi|189499637|ref|YP_001959107.1| CMP/dCMP deaminase zinc-binding [Chlorobium phaeobacteroides BS1] gi|189495078|gb|ACE03626.1| CMP/dCMP deaminase zinc-binding [Chlorobium phaeobacteroides BS1] Length = 156 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 78/144 (54%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A EA A + E+PVGAV N II R N+ L D TAHAE++A+ Sbjct: 6 FMEPAFREAIKAYEKKEVPVGAVVFDANGHIIGRGYNQVEALTDATAHAEMIALTSAMAT 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L + L VTLEPC MCA AI A++ R+ +GA + K G +H Sbjct: 66 LGSKYLSDCTLAVTLEPCPMCAGAIVNAKVGRVVFGAYDAKMGACGTVMNITASRDLNHQ 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+Y GI E +++ ++Q+FF+ R Sbjct: 126 PEVYGGILEHKAQSLLQEFFRGLR 149 >gi|326560079|gb|EGE10469.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis 46P47B1] gi|326561665|gb|EGE12002.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis 103P14B1] gi|326565806|gb|EGE15968.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis BC1] gi|326570459|gb|EGE20499.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis BC8] gi|326573436|gb|EGE23404.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis 101P30B1] Length = 181 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M+ ALE A+ A EIPVGAV V +I+ N +D TAHAEI+A+R C L+ Sbjct: 29 MNRALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRACETLN 88 Query: 68 QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP+ LYVTLEPCTMC A+ ARI R+ +GA PK G + + + +H Sbjct: 89 NYRLPKGCILYVTLEPCTMCFGALIHARISRVVFGAFEPKAGVVVSQLKLPEQVFYNHHL 148 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +Y G+ +S ++ FF++RR Sbjct: 149 SVYGGLLADKSSALLSGFFRQRR 171 >gi|323499761|ref|ZP_08104720.1| tRNA-specific adenosine-34 deaminase [Vibrio sinaloensis DSM 21326] gi|323315002|gb|EGA68054.1| tRNA-specific adenosine-34 deaminase [Vibrio sinaloensis DSM 21326] Length = 179 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/147 (36%), Positives = 81/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +FM A++ A+ A E+PVGAV V + +II+ N++ D TAHAEI +R Sbjct: 9 QDELFMRRAMDLAKQAEAEGEVPVGAVLVKDGEIIAEGWNQSIGQNDATAHAEIQTLRKA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++L L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 69 GQVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFEHQAA 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E R +Q FFK RR Sbjct: 129 YHYADVERGLLETECRTQLQAFFKRRR 155 >gi|283786173|ref|YP_003366038.1| tRNA-specific adenosine deaminase [Citrobacter rodentium ICC168] gi|282949627|emb|CBG89246.1| tRNA-specific adenosine deaminase [Citrobacter rodentium ICC168] Length = 180 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G +L Sbjct: 24 WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 83 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 84 QNYRLIDATLYVTLEPCVMCAGAMVHSRISRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 143 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ ++ DFF+ RR Sbjct: 144 EITEGVLRDECATLLSDFFRMRR 166 >gi|22536583|ref|NP_687434.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae 2603V/R] gi|25010509|ref|NP_734904.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae NEM316] gi|76788440|ref|YP_329120.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae A909] gi|77408782|ref|ZP_00785512.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae COH1] gi|77412323|ref|ZP_00788636.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae CJB111] gi|77413967|ref|ZP_00790141.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae 515] gi|22533418|gb|AAM99306.1|AE014209_19 cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae 2603V/R] gi|23094862|emb|CAD46080.1| Unknown [Streptococcus agalactiae NEM316] gi|76563497|gb|ABA46081.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae A909] gi|77160003|gb|EAO71140.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae 515] gi|77161612|gb|EAO72610.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae CJB111] gi|77172627|gb|EAO75766.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae COH1] gi|319744400|gb|EFV96759.1| cytidine/deoxycytidylate deaminase [Streptococcus agalactiae ATCC 13813] Length = 168 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ AL+EA+++ + EIP+G V V + II R N E HAEI+AI + Sbjct: 12 FMTEALKEAKSSLEKEEIPIGCVIVKDGHIIGRGHNAREEFNKAILHAEIMAINNANEKV 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LARI + YGA N K G + + + +H Sbjct: 72 GNWRLLDTTLFVTVEPCVMCSGAIGLARIPHVIYGAKNTKFGAAGSLYDILSDSRLNHRV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI E + +I+QDFF++ R Sbjct: 132 EVETGILEDQCAKIMQDFFRKGR 154 >gi|326203924|ref|ZP_08193786.1| CMP/dCMP deaminase zinc-binding [Clostridium papyrosolvens DSM 2782] gi|325986022|gb|EGD46856.1| CMP/dCMP deaminase zinc-binding [Clostridium papyrosolvens DSM 2782] Length = 151 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+++A+ A + E PVGA+ V + ++I+ N+ E +DVT+HAEI A++ + L Sbjct: 8 FMQEAIKQAKEAYAKGESPVGAIVVKDGELIASGCNQKEEKQDVTSHAEIEALKKAAKKL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+YVTLEPC MCA AI +RI+ LY GA + K G + + + +H Sbjct: 68 GTWRLDGCDMYVTLEPCAMCAGAIIQSRIKTLYIGAMDKKAGAAGSVIDLFRVPQFNHRV 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + I+ +FFK R Sbjct: 128 DVVYGLMFEECGNILTEFFKRLR 150 >gi|325264602|ref|ZP_08131332.1| cytidine/deoxycytidylate deaminase family protein [Clostridium sp. D5] gi|324030264|gb|EGB91549.1| cytidine/deoxycytidylate deaminase family protein [Clostridium sp. D5] Length = 159 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/149 (37%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+ +A+ A E+P+G V V +KII R NR K+ AHAE+ AIR Sbjct: 1 MNADEKYMKEAIRQAKKAYALEEVPIGCVIVYQDKIIGRGYNRRTIDKNPLAHAELTAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L+ L E LYVTLEPC MC+ AI AR++R+ G NPK G + + Sbjct: 61 RASKKLNDWRLEECTLYVTLEPCQMCSGAIIQARVQRVVVGCMNPKAGCAGSILNLLEMK 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ +++ FFKE R Sbjct: 121 EFNHQAELTTGVLEKECSTMMKQFFKELR 149 >gi|255534103|ref|YP_003094475.1| zinc-binding CMP/dCMP deaminase [Pedobacter heparinus DSM 2366] gi|255347087|gb|ACU06413.1| CMP/dCMP deaminase zinc-binding [Pedobacter heparinus DSM 2366] Length = 157 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 73/143 (51%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EAQ A EIP+GA+ V KI+ R N +L DVTAHAE+ A + L Sbjct: 19 FMRLALQEAQKAYDLKEIPIGAIVVCKGKIVGRGHNLTEQLNDVTAHAEMQAFTAASQTL 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVT+EPC MCA A +I +L YGA PK G Q H Sbjct: 79 GGKYLKDCTLYVTIEPCVMCAGASYWTQIGKLVYGAPEPKRGFTTKSNQLL-----HPKT 133 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ Q ++ FF ++R Sbjct: 134 VLKSGVLAQECGALMTKFFADKR 156 >gi|238796745|ref|ZP_04640251.1| tRNA-specific adenosine deaminase [Yersinia mollaretii ATCC 43969] gi|238719476|gb|EEQ11286.1| tRNA-specific adenosine deaminase [Yersinia mollaretii ATCC 43969] Length = 181 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A A E+PVGAV VL+N++I NR+ D TAHAEI+A+R G + + Sbjct: 22 WMQRAMTLALRAQEEGEVPVGAVLVLDNQVIGEGWNRSIRDNDPTAHAEIMALRQGGQAV 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LYVTLEPC MCA A+ +RIRRL YGA++ K G + +H Sbjct: 82 QNYRLLEATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLVDILRHPGMNHQV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + FF+ RR Sbjct: 142 EISAGVLADACSHQLSAFFRLRR 164 >gi|326571142|gb|EGE21166.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis BC7] Length = 159 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M+ ALE A+ A EIPVGAV V +I+ N +D TAHAEI+A+R C L+ Sbjct: 7 MNRALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRACETLN 66 Query: 68 QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP+ LYVTLEPCTMC A+ ARI R+ +GA PK G + + + +H Sbjct: 67 NYRLPKGCILYVTLEPCTMCFGALIHARISRVVFGAFEPKAGVVVSQLKLPEQVFYNHHL 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +Y G+ +S ++ FF++RR Sbjct: 127 SVYGGLLADKSSALLSGFFRQRR 149 >gi|257416518|ref|ZP_05593512.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis AR01/DG] gi|257158346|gb|EEU88306.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ARO1/DG] Length = 173 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA+ A E+P+GAV V +II R N ++ T+HAE+ AI+ CR + Sbjct: 16 FMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATSHAEMYAIQEACRGI 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E L+VTLEPC MC+ A+ LARI +YYGA++PK G +H Sbjct: 76 ENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVA 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R ++ FFK+ R Sbjct: 136 YVEAGVLEEECRLLLVQFFKKLR 158 >gi|255975330|ref|ZP_05425916.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T2] gi|307281893|ref|ZP_07562108.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0860] gi|255968202|gb|EET98824.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T2] gi|306503847|gb|EFM73069.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0860] Length = 173 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA+ A E+P+G+V V +II R N ++ TAHAE+ AI+ CR + Sbjct: 16 FMREAIAEAKKAEGLAEVPIGSVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACRGI 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E L+VTLEPC MC+ A+ LARI +YYGA++PK G +H Sbjct: 76 ENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVA 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R ++ FFK+ R Sbjct: 136 YVEAGVLEEECRLLLVQFFKKLR 158 >gi|270291666|ref|ZP_06197882.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus sp. M143] gi|270279751|gb|EFA25592.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus sp. M143] Length = 155 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 79/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL EA+ A +EIP+G V V N +II R N EL+ HAEI+AI Sbjct: 5 VEEKEAFMREALREAEIALEHDEIPIGCVIVKNGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 65 NANASEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E I+QDFF+ RR Sbjct: 125 RLNHRVEVETGVLESECAAIMQDFFRNRR 153 >gi|237756081|ref|ZP_04584658.1| tRNA-specific adenosine deaminase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691753|gb|EEP60784.1| tRNA-specific adenosine deaminase [Sulfurihydrogenibium yellowstonense SS-5] Length = 149 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 84/143 (58%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A++EA+ A +NE+PVGA+ V + KIIS+A N+ + HAEILAI C+ L Sbjct: 7 FIDQAVKEAEKALKKNEVPVGAIIVKDGKIISKAHNQRISKNNALYHAEILAIEKACKKL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LY TLEPC MC A+ ARI+++ + A + KGG + + + + Sbjct: 67 KTWRLDDAVLYTTLEPCLMCTGAVMQARIKKVVFCAKDEKGGAVLSKYTVFDDKKLPFNV 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E Y I ++R +++++FFK+ R Sbjct: 127 E-YEYIPDERCSKLLKEFFKKLR 148 >gi|238793763|ref|ZP_04637384.1| tRNA-specific adenosine deaminase [Yersinia intermedia ATCC 29909] gi|238726827|gb|EEQ18360.1| tRNA-specific adenosine deaminase [Yersinia intermedia ATCC 29909] Length = 181 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A A E+PVGAV VL N++I N++ D TAHAEI+A+R G +++ Sbjct: 22 WMQRALTLALRAQNEGEVPVGAVLVLGNQVIGEGWNKSIRDNDPTAHAEIMALRQGGQVV 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LYVTLEPC MCA A+ +RIRRL YGA++ K G + +H Sbjct: 82 QNYRLLEATLYVTLEPCVMCAGAMIHSRIRRLVYGANDLKTGAAGSLVDILHHPGMNHQI 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + + FF+ RR Sbjct: 142 EVSAGVLAETCSHQLSAFFRLRR 164 >gi|229588606|ref|YP_002870725.1| putative deaminase [Pseudomonas fluorescens SBW25] gi|229360472|emb|CAY47329.1| putative deaminase [Pseudomonas fluorescens SBW25] Length = 166 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL A A E+PVGAV V + +II R N D +AHAE++AIR + + Sbjct: 19 FMREALVLAAQGAALGEVPVGAVLVQDGEIIGRGFNCPISGNDPSAHAEMVAIRAAAQAI 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S L LYVTLEPC+MCA I +RI R+ YGA PK G +++ QF+T +H Sbjct: 79 SNYRLVGSTLYVTLEPCSMCAGLIVHSRIARVVYGALEPKAGIVQSQGQFFTQGFLNHRV 138 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ Q ++ +FF+ RR Sbjct: 139 VFEGGVLAQECGTVLSEFFRARR 161 >gi|237653174|ref|YP_002889488.1| CMP/dCMP deaminase zinc-binding [Thauera sp. MZ1T] gi|237624421|gb|ACR01111.1| CMP/dCMP deaminase zinc-binding [Thauera sp. MZ1T] Length = 154 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALE+A+ A +E+PVGAV V +I+ R N+ D TAHAEI+A+R L Sbjct: 6 YMRAALEQARAAGAADEVPVGAVVVCGGEIVGRGFNQPIGRHDPTAHAEIMALRDAAAHL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP +LYVTLEPC MC+ AI ARI R+ +GA +PK G + + +H Sbjct: 66 GNYRLPGCELYVTLEPCAMCSGAIMHARIARVVFGARDPKTGVAGSVLDLFAEPRLNHHA 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I G+ +++ FF RR Sbjct: 126 TIEGGLLADECGRMLSSFFAARR 148 >gi|296113086|ref|YP_003627024.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis RH4] gi|295920780|gb|ADG61131.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis RH4] Length = 159 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M+ ALE A+ A EIPVGAV V +I+ N +D TAHAEI+A+R C L+ Sbjct: 7 MNRALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRACETLN 66 Query: 68 QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP+ LYVTLEPCTMC A+ ARI R+ +GA PK G + + + +H Sbjct: 67 NYRLPKGCILYVTLEPCTMCFGALIHARISRVVFGAFEPKAGVVVSQLKLPEQVFYNHHL 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +Y G+ +S ++ FF++RR Sbjct: 127 SVYGGLLADKSSALLSGFFRQRR 149 >gi|254509189|ref|ZP_05121287.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus 16] gi|219547894|gb|EED24921.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus 16] Length = 187 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+E A +A E+PVGAV V + +II+ N++ D TAHAE+ IR ++L Sbjct: 20 YMRRAMELAAHAETEGEVPVGAVLVKDGEIIAEGWNQSIGCHDATAHAEMQTIRKAGQVL 79 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +R++R+ +GA + K G + +H Sbjct: 80 ENYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFEHQAAYHYA 139 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E+ R +Q FFK RR Sbjct: 140 DVEQGLLEEECRVQLQSFFKRRR 162 >gi|302037080|ref|YP_003797402.1| tRNA-specific adenosine deaminase [Candidatus Nitrospira defluvii] gi|300605144|emb|CBK41477.1| tRNA-specific adenosine deaminase [Candidatus Nitrospira defluvii] Length = 162 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL A++A L E+P+ A+ V +I++A N +D TAHAE++ I+ R + Sbjct: 11 FMQQALTLARSAPLIGEVPIAALLVHEGIVIAQAHNLRETRQDPTAHAEVIVIQDAARHM 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMC AI LARI RL + A++PK G + +H Sbjct: 71 GSWRLINTTLYVTLEPCTMCIGAIVLARIPRLVFAATDPKAGACGSIMNIPPEPRLNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + S+ ++QDFF++ R Sbjct: 131 EVVGGVCAEESQALLQDFFQQLR 153 >gi|71907824|ref|YP_285411.1| tRNA-adenosine deaminase [Dechloromonas aromatica RCB] gi|71847445|gb|AAZ46941.1| tRNA-adenosine deaminase [Dechloromonas aromatica RCB] Length = 146 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/139 (39%), Positives = 76/139 (54%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 A+ A+ A E+PVGAV VLN +I+ R N D TAHAEI A+R R+L Sbjct: 4 AISLARAAECLGEVPVGAVVVLNGEIVGRGFNSPIGESDPTAHAEIAALRDAARVLGNYR 63 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130 LP +L+VTLEPC MCA AI +RI R+ YGA +PK G + + + +H + Sbjct: 64 LPGCELFVTLEPCAMCAGAIMHSRISRVIYGARDPKTGVHGSVVDLFGVERLNHHATVEG 123 Query: 131 GISEQRSRQIIQDFFKERR 149 G+ + ++ FF RR Sbjct: 124 GVLAEECSTLLSGFFASRR 142 >gi|325662866|ref|ZP_08151435.1| hypothetical protein HMPREF0490_02175 [Lachnospiraceae bacterium 4_1_37FAA] gi|325470918|gb|EGC74147.1| hypothetical protein HMPREF0490_02175 [Lachnospiraceae bacterium 4_1_37FAA] Length = 163 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ +A+ A E+P+G V V +KII+R NR K+ AHAE++AIR Sbjct: 1 MNQDEKYMKEAIRQAKKAYALKEVPIGCVIVYQDKIIARGYNRRTIDKNTLAHAELIAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + +YVTLEPC MC+ AI +R++++ G NPK G + + Sbjct: 61 KASRKMDDWRLEDCTMYVTLEPCQMCSGAIVQSRMKKVVVGCMNPKAGCAGSIFNLLQVP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ Q+++ FF+E R Sbjct: 121 QFNHQVELEIGVLEEECSQLMKSFFRELR 149 >gi|288934060|ref|YP_003438119.1| CMP/dCMP deaminase zinc-binding protein [Klebsiella variicola At-22] gi|288888789|gb|ADC57107.1| CMP/dCMP deaminase zinc-binding protein [Klebsiella variicola At-22] Length = 169 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G + Sbjct: 11 WMRHALTLAKRAWEEGEVPVGAVLVYNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVQ 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI RL +GA + K G + +H Sbjct: 71 QNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLIDVLHHPGMNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + ++ DFF+ RR Sbjct: 131 EISEGVLAESCSTMLSDFFRWRR 153 >gi|51245291|ref|YP_065175.1| hypothetical protein DP1439 [Desulfotalea psychrophila LSv54] gi|50876328|emb|CAG36168.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54] Length = 166 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 81/144 (56%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++M AL+EA A E+PVGAV V + ++I+ N D +AHAEI+A+R ++ Sbjct: 12 LWMGYALDEAARAGANGEVPVGAVLVQDGELIATGLNGMITHNDPSAHAEIVALRQAGQV 71 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L+ PE LYVTLEPC MC AI ARI+RL + A + K G + +H Sbjct: 72 LNNYRFPEATLYVTLEPCIMCMGAIIQARIKRLVFAAFDTKTGAAGSLYDIGRDGALNHR 131 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 EI G+ + S +++ FF++RR Sbjct: 132 VEIMGGVLAETSAALLKAFFRDRR 155 >gi|300214872|gb|ADJ79288.1| Cytosine/adenosine deaminase [Lactobacillus salivarius CECT 5713] Length = 166 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+ AA E+P+G V V + KII R N ++ T HAE+LAI + Sbjct: 11 FMKEALFEAKLAAKIGEVPIGCVIVKDGKIIGRGHNLREHSQNATLHAEMLAIEEANETV 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L+VTLEPC MC+ AI +RI +YYGAS+PK G + + +H Sbjct: 71 NSWRLVDTQLFVTLEPCPMCSGAIINSRIPEVYYGASDPKAGTVGTLMNLLEDSRFNHQS 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI E I++DFFK R Sbjct: 131 FVEKGILENECASILKDFFKSIR 153 >gi|293390603|ref|ZP_06634937.1| tRNA-specific adenosine deaminase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951137|gb|EFE01256.1| tRNA-specific adenosine deaminase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 175 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/144 (42%), Positives = 82/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL A A EIPVGAV V +II N + D TAHAEI+A+R G + Sbjct: 12 FMRHALMLAGKAEALGEIPVGAVLVSEAGEIIGEGWNLSIIHSDPTAHAEIVALRQGGQK 71 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + LYVTLEPCTMCA AI +RI+RL +GA++ K G + + F+ +H Sbjct: 72 LQNYRLLNITLYVTLEPCTMCAGAILHSRIKRLVFGAADYKTGAVGSRFHFFDDYKMNHV 131 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 EI G+ +Q + + FF++RR Sbjct: 132 IEITGGVLQQECSEKLSAFFQKRR 155 >gi|17232364|ref|NP_488912.1| hypothetical protein all4872 [Nostoc sp. PCC 7120] gi|17134009|dbj|BAB76571.1| all4872 [Nostoc sp. PCC 7120] Length = 147 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 79/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 MS ALE A+ A EIPVGAV + +I+ NR +D TAHAEI+A+R +IL Sbjct: 1 MSHALELAKVAGEAGEIPVGAVITDASGHLIAEGENRKERDQDPTAHAEIVALRAATKIL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LYVTLEPC MCA AI +R+ +L YG + K G I A +H Sbjct: 61 QTWRLHECTLYVTLEPCPMCAGAIIHSRLGKLVYGVDDTKTGAIRTVLNIPDSAASNHRL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI E RQ +Q++F RR Sbjct: 121 QVIGGILESACRQHLQNWFVNRR 143 >gi|157144506|ref|YP_001451825.1| tRNA-specific adenosine deaminase [Citrobacter koseri ATCC BAA-895] gi|157081711|gb|ABV11389.1| hypothetical protein CKO_00224 [Citrobacter koseri ATCC BAA-895] Length = 180 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G +L Sbjct: 24 WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGHHDPTAHAEIMALRQGGLVL 83 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 84 QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 143 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ ++ DFF+ RR Sbjct: 144 EITEGVLRDECAALLSDFFRMRR 166 >gi|172036189|ref|YP_001802690.1| putative cytidine/deoxycytidylate deaminase [Cyanothece sp. ATCC 51142] gi|171697643|gb|ACB50624.1| putative cytidine/deoxycytidylate deaminase [Cyanothece sp. ATCC 51142] Length = 184 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 58/144 (40%), Positives = 77/144 (53%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL+ A AA ++PVGAV + + N II+ N + D T HAEI+AI I Sbjct: 38 WMRQALQLANKAAELGDVPVGAVIINHQNNIIAEGYNSKEQNHDPTGHAEIMAIHRASEI 97 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L E LYVTLEPC MCA AI +R+ L YG +PK G I A +H Sbjct: 98 LQSWHLEECTLYVTLEPCIMCAGAIIQSRLGLLVYGLDDPKSGSIRTVLNLPDSAASNHR 157 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI E RQ ++D+F ++R Sbjct: 158 LSVLSGILEDECRQQLRDWFTDKR 181 >gi|319953292|ref|YP_004164559.1| cmp/dcmp deaminase zinc-binding protein [Cellulophaga algicola DSM 14237] gi|319421952|gb|ADV49061.1| CMP/dCMP deaminase zinc-binding protein [Cellulophaga algicola DSM 14237] Length = 149 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 82/143 (57%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+EA A + E+PVGA+ V+ ++II+RA N +L DVTAHAE+ AI L Sbjct: 10 YMKKALQEAAMAFEKGEVPVGAIIVIQDRIIARAHNLTEQLNDVTAHAEMQAITAAANFL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC MCA A+ ++I ++ Y A + + G GT T H Sbjct: 70 GGKYLKDCTLYVTLEPCQMCAGALYWSQISKIVYAAKDVERGCGAMGT------TLHPKT 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ + +++ FF ++R Sbjct: 124 KIVGGVLAAEASAMLKRFFSQKR 146 >gi|329119731|ref|ZP_08248411.1| tRNA-specific adenosine deaminase [Neisseria bacilliformis ATCC BAA-1200] gi|327464180|gb|EGF10485.1| tRNA-specific adenosine deaminase [Neisseria bacilliformis ATCC BAA-1200] Length = 151 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL++A+ AA NE+PVGA+ V + +I++ A N V AHAEILA+ + L Sbjct: 9 LMAAALDKARQAAAENEVPVGALIVRDGQILAAAHNACAAQNSVAAHAEILALTAAGQSL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D Y+TLEPC MCA+A+ ARI+R+ + A+ PK G + + + Sbjct: 69 GTPRLDSCDAYITLEPCPMCASALMQARIKRVIFAAAEPKSGAAGSVCNLFADTRLNAHT 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI + SR ++Q FF+ RR Sbjct: 129 AVFGGIMAEESRTLLQAFFRSRR 151 >gi|170019158|ref|YP_001724112.1| tRNA-specific adenosine deaminase [Escherichia coli ATCC 8739] gi|169754086|gb|ACA76785.1| CMP/dCMP deaminase zinc-binding [Escherichia coli ATCC 8739] Length = 167 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 11 WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + + +H Sbjct: 71 QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHSGMNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI ++ DFF+ RR Sbjct: 131 EITEGILADECAALLSDFFRMRR 153 >gi|329943103|ref|ZP_08291877.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Chlamydophila psittaci Cal10] gi|332287685|ref|YP_004422586.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila psittaci 6BC] gi|325506881|gb|ADZ18519.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila psittaci 6BC] gi|328814650|gb|EGF84640.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Chlamydophila psittaci Cal10] Length = 148 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/142 (40%), Positives = 80/142 (56%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M+ AL+EA+ A +E+PVG V V +NKII+R N +L+D TAHAEIL I + L Sbjct: 1 MNQALKEARQAYDEDEVPVGCVIVKDNKIIARGHNTTEKLQDPTAHAEILCIGAAAQYLE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LY TLEPC MCA AI ARIRR+ + A + + G + + H E Sbjct: 61 NWRLVDTVLYCTLEPCLMCAGAIQQARIRRIVWAAPDLRLGAGGSWINVFKEKHPFHQVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 GI + + Q+++ FF +R Sbjct: 121 CCSGICREDAEQLMKQFFIGKR 142 >gi|238897621|ref|YP_002923300.1| CMP/dCMP deaminase; zinc-binding [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465378|gb|ACQ67152.1| CMP/dCMP deaminase; zinc-binding [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 168 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 79/143 (55%), Gaps = 2/143 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+P+GAV V+NN+ I N++ D TAHAEI+A+R R Sbjct: 18 WMRHALSLAEQAQASGEVPIGAVVVVNNQSIGEGWNQSVMCHDPTAHAEIIALRQAGRHQ 77 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MC AI +RIR L YGA +PK GG+ T+ + Sbjct: 78 KNYRLVNATLYVTLEPCMMCVGAIMHSRIRGLVYGAPDPKKGGVAFLTRMMNIQV--KRI 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I + Q +++ DFF++RR Sbjct: 136 DIKTDVLSQTCSRMLVDFFQQRR 158 >gi|319790641|ref|YP_004152274.1| CMP/dCMP deaminase zinc-binding protein [Thermovibrio ammonificans HB-1] gi|317115143|gb|ADU97633.1| CMP/dCMP deaminase zinc-binding protein [Thermovibrio ammonificans HB-1] Length = 148 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 51/122 (41%), Positives = 75/122 (61%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ AL EA+ A E+P+GAV V N ++I++A NR L+D TAHAE++AIR R L Sbjct: 6 FLRLALREAEKALSFGEVPIGAVVVRNGEVIAKAFNRKEFLQDPTAHAELIAIREAARKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + +Y T+EPC MC AI +RI+R+ Y +PK GG+E+ + +H P Sbjct: 66 NSWRLNDCTIYSTVEPCIMCCGAIIQSRIKRVVYSTPDPKFGGVESLYRLLGDERNNHRP 125 Query: 127 EI 128 E+ Sbjct: 126 EV 127 >gi|22297721|ref|NP_680968.1| putative cytidine or deoxycytidylate [Thermosynechococcus elongatus BP-1] gi|22293898|dbj|BAC07730.1| tlr0177 [Thermosynechococcus elongatus BP-1] Length = 164 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 81/146 (55%), Gaps = 1/146 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + +M A+ A+ A +E+PVGAV V N++I+ NR + D TAHAEI+A+R Sbjct: 14 DFWMQQAIALAEQAGAADEVPVGAVIVSAENELIATGENRRQRDHDPTAHAEIIALRRAG 73 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L L LYVTLEPC MCA AI ARI L YG ++PK G I++ Q Sbjct: 74 QRLGTWYLTGCRLYVTLEPCPMCAGAIVQARIHTLIYGTTDPKSGAIDSVLQLPQSPAVF 133 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ RQ +Q +F++ R Sbjct: 134 HRIQVIRGVQAVACRQQLQRWFRQHR 159 >gi|253988801|ref|YP_003040157.1| tRNA -specific adenosine deaminase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780251|emb|CAQ83412.1| similar to ecoli yfhc protein, tRNA-specific adenosine deaminase [Photorhabdus asymbiotica] Length = 169 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+E A A + EIPVGAV V +N+II+ N++ D +AHAE++A+R G L Sbjct: 10 WMQQAMERAIKAWEQGEIPVGAVLVADNEIIAEGWNQSIIAHDPSAHAEVIALRKGGEQL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA A+ +RI+RL YGAS+ K G + +H Sbjct: 70 QNYRLLNTTLYVTLEPCAMCAGAMIHSRIQRLVYGASDMKTGAAGSLIDILRHPGMNHQI 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + ++ FFK+RR Sbjct: 130 EITGGVLAEACSTMLSVFFKQRR 152 >gi|149190045|ref|ZP_01868322.1| cytosine/adenosine deaminase [Vibrio shilonii AK1] gi|148836075|gb|EDL53035.1| cytosine/adenosine deaminase [Vibrio shilonii AK1] Length = 178 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E A +A E+PVGAV V KII+ N++ D TAHAE+ IR + L Sbjct: 17 FMQRAMELANHAESEGEVPVGAVLVRGGKIIAEGWNQSIGNHDATAHAEMQVIRKAGQNL 76 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +R++R+ +GA + K G + +H Sbjct: 77 ENYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQASYHYA 136 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E+ R +Q FFK RR Sbjct: 137 DVESGLLEEECRHQLQAFFKRRR 159 >gi|315633684|ref|ZP_07888974.1| tRNA-specific adenosine deaminase [Aggregatibacter segnis ATCC 33393] gi|315477726|gb|EFU68468.1| tRNA-specific adenosine deaminase [Aggregatibacter segnis ATCC 33393] Length = 175 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/144 (42%), Positives = 82/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL A A EIPVGAV V +II N + D TAHAEI+A+R G + Sbjct: 12 FMRHALMLADKAEALGEIPVGAVLVSEEGEIIGEGWNLSIIDSDPTAHAEIVALRQGGQR 71 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LYVTLEPCTMCA AI +RI+RL +GA++ K G + + F+ +H+ Sbjct: 72 LQNYRLLNATLYVTLEPCTMCAGAILHSRIKRLVFGAADYKTGAVGSRFHFFDDYKMNHA 131 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 EI G+ +Q + + FF++RR Sbjct: 132 IEITGGVLQQECSEKLSAFFQKRR 155 >gi|123441377|ref|YP_001005364.1| tRNA-specific adenosine deaminase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088338|emb|CAL11129.1| putative zinc-binding protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 161 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/142 (40%), Positives = 78/142 (54%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A A + E+PVGA+ VL+N++I NR D TAHAEI+A+R G +++ Sbjct: 1 MQRALALALRAQVEGEVPVGAILVLDNQVIGEGWNRPIRDNDPTAHAEIMALRQGGQVVQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + +H E Sbjct: 61 NYRLIDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLVDILRHPGMNHQIE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I G+ + FF+ RR Sbjct: 121 ITAGVMADACAHQLSAFFRLRR 142 >gi|146308436|ref|YP_001188901.1| CMP/dCMP deaminase, zinc-binding [Pseudomonas mendocina ymp] gi|145576637|gb|ABP86169.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina ymp] Length = 158 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ A + E+PVGAV V + +++ + N D +AHAE++AIR + + Sbjct: 15 FMRLALVQARLGAEQGEVPVGAVLVQDGEVVGQGFNCPILRHDPSAHAEMVAIRAAAQSV 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP LYVTLEPC+MCA I ARI R+ Y AS P+ G + QF+ +H Sbjct: 75 QNYRLPGSTLYVTLEPCSMCAGLIVHARIARVVYAASEPRAGVAISQGQFFDQGFLNHRV 134 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + S +++DFFK RR Sbjct: 135 LVEGGLLAEESGALLKDFFKARR 157 >gi|332526241|ref|ZP_08402370.1| tRNA-adenosine deaminase [Rubrivivax benzoatilyticus JA2] gi|332110075|gb|EGJ10703.1| tRNA-adenosine deaminase [Rubrivivax benzoatilyticus JA2] Length = 188 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 55/142 (38%), Positives = 80/142 (56%), Gaps = 4/142 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNN----KIISRAGNRNRELKDVTAHAEILAIRMGC 63 M+ AL++AQNA L E+PVGAV + ++++ NR D TAHAEI+A+R Sbjct: 15 MAIALDQAQNAWLVGEVPVGAVIMRPGPEGPQVLATGYNRPITTHDPTAHAEIVALRHAA 74 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 +L LPE +LYVTLEPC MCA A+ AR +R+ YGA +PK G + + + Sbjct: 75 TLLGNYRLPECELYVTLEPCAMCAMALMHARFKRIVYGAPDPKTGAAGSVVDLFADRRLN 134 Query: 124 HSPEIYPGISEQRSRQIIQDFF 145 H +I G+ +++ FF Sbjct: 135 HHTQIVGGVMAAECGDLLRRFF 156 >gi|37679027|ref|NP_933636.1| cytosine/adenosine deaminase [Vibrio vulnificus YJ016] gi|37197769|dbj|BAC93607.1| cytosine/adenosine deaminase [Vibrio vulnificus YJ016] Length = 181 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 55/147 (37%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + VFM A+E A A E+PVGAV V + ++I+ N++ D TAHAEI +R Sbjct: 11 QDEVFMRRAIELAAIAESEGEVPVGAVLVKDGEVIAEGWNQSIGQHDATAHAEIQTLRQA 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + LYVTLEPC MCA A+ +R++R+ +GA + K G ++ Sbjct: 71 GQSLGNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLDLFSSQAA 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ E R+ +Q FFK RR Sbjct: 131 YHYATIDKGLLESECREQLQAFFKRRR 157 >gi|309800211|ref|ZP_07694392.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus infantis SK1302] gi|308116152|gb|EFO53647.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus infantis SK1302] Length = 166 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL+EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 VEEKEVFMREALKEAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI ++ YGA N K G + T Sbjct: 65 NANVREESWRLLDCTLFVTIEPCVMCSGAIGLARIPKVVYGAKNQKFGAAGSLYDILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+Q+FF+ RR Sbjct: 125 RLNHRVEVETGILESECAGIMQEFFRNRR 153 >gi|145641906|ref|ZP_01797480.1| preprotein translocase subunit SecA [Haemophilus influenzae R3021] gi|145273385|gb|EDK13257.1| preprotein translocase subunit SecA [Haemophilus influenzae 22.4-21] Length = 147 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 80/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A EIPVGAV V ++ II N + D TAHAEI+A+R G + + Sbjct: 1 MRYALTLADKAEALGEIPVGAVLVDDSGNIIGEGWNLSIVQNDPTAHAEIIALRNGAKNI 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMCA AI +RI+RL +G S+ K G I + F+ +H+ Sbjct: 61 QNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGTSDYKTGAIGSRFHFFDDYKMNHTL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q + FF++RR Sbjct: 121 EITSGVLAEECSQKLSTFFQKRR 143 >gi|259650544|dbj|BAI42706.1| putative cytosine/adenosine deaminase [Lactobacillus rhamnosus GG] Length = 170 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/130 (43%), Positives = 74/130 (56%), Gaps = 6/130 (4%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+P+GAV V + +II R N +D T HAEILAI+ CR L L + L+VTLEP Sbjct: 27 EVPIGAVVVHDQQIIGRGYNLRETTQDATQHAEILAIQAACRQLGTWRLEDCSLFVTLEP 86 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL---ATCHHSPEIYPGISEQRSRQ 139 C MCA + ARI Y+GA++PK G GT FY L +H + PGI S Sbjct: 87 CPMCAGTMINARIATCYFGATDPKAG--VAGT-FYNLLEDTRFNHQVAVVPGIQAIASAA 143 Query: 140 IIQDFFKERR 149 ++QDFF+ R Sbjct: 144 LLQDFFRAIR 153 >gi|184157936|ref|YP_001846275.1| cytosine/adenosine deaminase [Acinetobacter baumannii ACICU] gi|332872773|ref|ZP_08440739.1| cytidine and deoxycytidylate deaminase zinc-binding region [Acinetobacter baumannii 6014059] gi|183209530|gb|ACC56928.1| Cytosine/adenosine deaminase [Acinetobacter baumannii ACICU] gi|322508255|gb|ADX03709.1| Putative deaminase [Acinetobacter baumannii 1656-2] gi|323517881|gb|ADX92262.1| cytosine/adenosine deaminase [Acinetobacter baumannii TCDC-AB0715] gi|332739070|gb|EGJ69931.1| cytidine and deoxycytidylate deaminase zinc-binding region [Acinetobacter baumannii 6014059] Length = 167 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 59/140 (42%), Positives = 75/140 (53%), Gaps = 1/140 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A E+A+ AA + EIPVGAV V NK+I N L D TAHAEI AIR C L Sbjct: 9 WMQLAYEQAELAAKQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESL 68 Query: 67 SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 LPE LYVTLEPCTMC A+ ARI+ + +G + PK G + + Q +H Sbjct: 69 KNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGYYNHK 128 Query: 126 PEIYPGISEQRSRQIIQDFF 145 G ++ Q + FF Sbjct: 129 FTFEHGYLHEKCAQQLSLFF 148 >gi|45442315|ref|NP_993854.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Microtus str. 91001] gi|108808356|ref|YP_652272.1| tRNA-specific adenosine deaminase [Yersinia pestis Antiqua] gi|108811379|ref|YP_647146.1| tRNA-specific adenosine deaminase [Yersinia pestis Nepal516] gi|145599538|ref|YP_001163614.1| tRNA-specific adenosine deaminase [Yersinia pestis Pestoides F] gi|149365378|ref|ZP_01887413.1| tRNA-specific adenosine deaminase [Yersinia pestis CA88-4125] gi|229838506|ref|ZP_04458665.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895510|ref|ZP_04510681.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis Pestoides A] gi|229899076|ref|ZP_04514220.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis biovar Orientalis str. India 195] gi|229901629|ref|ZP_04516751.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis Nepal516] gi|45437179|gb|AAS62731.1| putative zinc-binding protein [Yersinia pestis biovar Microtus str. 91001] gi|108775027|gb|ABG17546.1| tRNA-adenosine deaminase [Yersinia pestis Nepal516] gi|108780269|gb|ABG14327.1| tRNA-adenosine deaminase [Yersinia pestis Antiqua] gi|145211234|gb|ABP40641.1| tRNA-adenosine deaminase [Yersinia pestis Pestoides F] gi|149291791|gb|EDM41865.1| tRNA-specific adenosine deaminase [Yersinia pestis CA88-4125] gi|229681558|gb|EEO77652.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis Nepal516] gi|229688021|gb|EEO80093.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis biovar Orientalis str. India 195] gi|229694872|gb|EEO84919.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701316|gb|EEO89344.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis Pestoides A] gi|320016065|gb|ADV99636.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 187 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A A E+PVGAV VL NK+I NR D TAHAEI+A+R G + + Sbjct: 28 WMRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQGGQAV 87 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + +H Sbjct: 88 QNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGMNHQI 147 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI + FF++RR Sbjct: 148 EVSAGILAIACSHQLSAFFRQRR 170 >gi|238788214|ref|ZP_04632009.1| tRNA-specific adenosine deaminase [Yersinia frederiksenii ATCC 33641] gi|238723801|gb|EEQ15446.1| tRNA-specific adenosine deaminase [Yersinia frederiksenii ATCC 33641] Length = 191 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A A E+PVGA+ VL+N++I NR D TAHAEI+A+R G R + Sbjct: 35 WMQRALALALRAQEEGEVPVGAILVLDNQVIGEGWNRPIRDNDPTAHAEIMALRQGGRAV 94 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + +H Sbjct: 95 QNYRLIDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLLDILRHPGMNHQI 154 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + FF++RR Sbjct: 155 EVCSGVLADACSHQLSAFFRQRR 177 >gi|170017868|ref|YP_001728787.1| cytosine/adenosine deaminase [Leuconostoc citreum KM20] gi|169804725|gb|ACA83343.1| Cytosine/adenosine deaminase [Leuconostoc citreum KM20] Length = 169 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 57/145 (39%), Positives = 80/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL EA A E+P+GAV V NN+II++A N + TAHAE++AI Sbjct: 13 DYFMQVALNEASIAFNEGEVPIGAVIVKNNQIIAKAHNHREAEQLATAHAELMAIEKANL 72 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L L+VTLEPC MCA AI +RI +YYGA + KGG + + A +H Sbjct: 73 KLKSWRLENTALFVTLEPCVMCAGAIINSRIPAVYYGADDVKGGATRSLYRLLEDARLNH 132 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ GI + Q+++ FF + R Sbjct: 133 RVAVHHGIRSEDCGQLLKQFFAQIR 157 >gi|262040295|ref|ZP_06013546.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042404|gb|EEW43424.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 180 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G +L Sbjct: 22 WMRHALTLAKRAWEEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI RL +GA + K G + +H Sbjct: 82 QNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLMDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I G+ + ++ DFF+ RR Sbjct: 142 AISEGVLAESCSAMLSDFFRWRR 164 >gi|261749231|ref|YP_003256916.1| putative cytosine/adenosine deaminase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497323|gb|ACX83773.1| putative cytosine/adenosine deaminase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 141 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 6/142 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A ++E+P+GA N II+RA N L D+TAHAE+L I + L Sbjct: 1 MKIALEEALIAFHKDEVPIGAAITYENGIIARAHNLTETLSDITAHAEMLVINLASDYLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 ++ + E LYVT+EPC MCA A+ ++I R+ G N K G + G + H + Sbjct: 61 KKYIQECTLYVTMEPCIMCAGALFFSQIGRVVCGTLNYKRGFLYTGIKL------HPRTK 114 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 GI + + + ++Q+FF +R Sbjct: 115 FLSGIMKNQCKNLLQEFFFFKR 136 >gi|22125207|ref|NP_668630.1| tRNA-specific adenosine deaminase [Yersinia pestis KIM 10] gi|162421541|ref|YP_001607945.1| tRNA-specific adenosine deaminase [Yersinia pestis Angola] gi|165928230|ref|ZP_02224062.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Orientalis str. F1991016] gi|165939213|ref|ZP_02227763.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Orientalis str. IP275] gi|166008235|ref|ZP_02229133.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua str. E1979001] gi|166212350|ref|ZP_02238385.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua str. B42003004] gi|167399598|ref|ZP_02305122.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421139|ref|ZP_02312892.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423684|ref|ZP_02315437.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467717|ref|ZP_02332421.1| tRNA-specific adenosine deaminase [Yersinia pestis FV-1] gi|270489818|ref|ZP_06206892.1| cytidine and deoxycytidylate deaminase zinc-binding region [Yersinia pestis KIM D27] gi|294504520|ref|YP_003568582.1| deaminase [Yersinia pestis Z176003] gi|21958073|gb|AAM84881.1|AE013733_2 putative deaminase [Yersinia pestis KIM 10] gi|162354356|gb|ABX88304.1| tRNA-specific adenosine deaminase [Yersinia pestis Angola] gi|165912813|gb|EDR31440.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Orientalis str. IP275] gi|165919737|gb|EDR37070.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Orientalis str. F1991016] gi|165992617|gb|EDR44918.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua str. E1979001] gi|166206281|gb|EDR50761.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua str. B42003004] gi|166960628|gb|EDR56649.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167052102|gb|EDR63510.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057854|gb|EDR67600.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|262362488|gb|ACY59209.1| deaminase [Yersinia pestis D106004] gi|262366507|gb|ACY63064.1| deaminase [Yersinia pestis D182038] gi|270338322|gb|EFA49099.1| cytidine and deoxycytidylate deaminase zinc-binding region [Yersinia pestis KIM D27] gi|294354979|gb|ADE65320.1| deaminase [Yersinia pestis Z176003] Length = 200 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A A E+PVGAV VL NK+I NR D TAHAEI+A+R G + + Sbjct: 41 WMRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQGGQAV 100 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + +H Sbjct: 101 QNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGMNHQI 160 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI + FF++RR Sbjct: 161 EVSAGILAIACSHQLSAFFRQRR 183 >gi|197119924|ref|YP_002140351.1| tRNA (adenosine-34) deaminase [Geobacter bemidjiensis Bem] gi|197089284|gb|ACH40555.1| tRNA (adenosine-34) deaminase [Geobacter bemidjiensis Bem] Length = 166 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ +A+ A E+P+GAV V + II+R N +D AHAE++AIR + L Sbjct: 8 WMGKAIAQARRAEAIGEVPIGAVIVKDGVIIARGHNLRESNQDPAAHAEMIAIRKAAKKL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVTLEPCTMC A+ L+R+ R+ +G+ +PKGG + +HS Sbjct: 68 ASWRLTGATLYVTLEPCTMCMGAVILSRLDRVVFGSYDPKGGAAGSLYDLSDDKRLNHSV 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + PG+ + + ++ FF E R Sbjct: 128 VLTPGVRGEETSSMLSGFFAELR 150 >gi|258509262|ref|YP_003172013.1| CMP/dCMP deaminase [Lactobacillus rhamnosus GG] gi|257149189|emb|CAR88162.1| CMP/dCMP deaminase, zinc-binding [Lactobacillus rhamnosus GG] Length = 168 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 57/130 (43%), Positives = 74/130 (56%), Gaps = 6/130 (4%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+P+GAV V + +II R N +D T HAEILAI+ CR L L + L+VTLEP Sbjct: 25 EVPIGAVVVHDQQIIGRGYNLRETTQDATQHAEILAIQAACRQLGTWRLEDCSLFVTLEP 84 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL---ATCHHSPEIYPGISEQRSRQ 139 C MCA + ARI Y+GA++PK G GT FY L +H + PGI S Sbjct: 85 CPMCAGTMINARIATCYFGATDPKAG--VAGT-FYNLLEDTRFNHQVAVVPGIQAIASAA 141 Query: 140 IIQDFFKERR 149 ++QDFF+ R Sbjct: 142 LLQDFFRAIR 151 >gi|77407016|ref|ZP_00784028.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae H36B] gi|77174376|gb|EAO77233.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae H36B] Length = 168 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+++ + EIP+G V V + II R N E HAEI+AI + Sbjct: 12 FMXEALKEAKSSLEKEEIPIGCVIVKDGHIIGRGHNAREEFNKAILHAEIMAINNANEKV 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LARI + YGA N K G + + + +H Sbjct: 72 GNWRLLDTTLFVTVEPCVMCSGAIGLARIPHVIYGAKNTKFGAAGSLYDILSDSRLNHRV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI E + +I+QDFF++ R Sbjct: 132 EVETGILEDQCAKIMQDFFRKGR 154 >gi|304315578|ref|YP_003850723.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777080|gb|ADL67639.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 143 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 58/142 (40%), Positives = 79/142 (55%), Gaps = 5/142 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M CA++EA + E+PVGAV V + II + N KD T HAEI AI+ C+ + Sbjct: 1 MKCAIDEAVLSLKLGEMPVGAVVVKDGIIIGKGHNLKETEKDATQHAEINAIKDACKNIG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA AI +RI+R+Y GA + G GT + L + + Sbjct: 61 DWRLNDASLYVTLEPCPMCAGAIIESRIKRVYIGAESHDSGA--AGTVYDFL---NKKVD 115 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y GI E +++I DFF R Sbjct: 116 VYFGIMEDDCKKLISDFFSRLR 137 >gi|73663465|ref|YP_302246.1| cytosine adenosine deaminase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495980|dbj|BAE19301.1| putative cytosine adenosine deaminase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 163 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+EEA+ A E+P+GA+ V N++II+RA N ++ TAHAE +AI+ Sbjct: 1 MTNHEFYMEVAIEEAKKAGNIGEVPIGAIIVKNDEIIARAHNLRESEQNPTAHAEHIAIQ 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L LYVTLEPC MCA +I ++RI + YGA +PKGG + Sbjct: 61 RAAAALGSWRLEGCTLYVTLEPCVMCAGSIVMSRIPSVIYGAKDPKGGCAGSLMNLLQEP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E+ Q++ FFK R Sbjct: 121 RFNHRATVEFGILEESCSQLLTAFFKNIR 149 >gi|333000872|gb|EGK20443.1| tRNA-specific adenosine deaminase [Shigella flexneri K-218] Length = 156 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 57/142 (40%), Positives = 77/142 (54%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 1 MRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + + +H E Sbjct: 61 NYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAVGSLMDVLHHPGMNHRVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I GI ++ DFF+ RR Sbjct: 121 ITEGILADECAALLSDFFRMRR 142 >gi|313206574|ref|YP_004045751.1| cmp/dcmp deaminase zinc-binding protein [Riemerella anatipestifer DSM 15868] gi|312445890|gb|ADQ82245.1| CMP/dCMP deaminase zinc-binding protein [Riemerella anatipestifer DSM 15868] gi|315023430|gb|EFT36438.1| tRNA-specific adenosine-34 deaminase [Riemerella anatipestifer RA-YM] gi|325335978|gb|ADZ12252.1| Cytosine/adenosine deaminase [Riemerella anatipestifer RA-GD] Length = 143 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 6/149 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM A +EA A ++E+PVG V V N ++I+R N L DVTAHAE+ +I Sbjct: 1 MFTDEYFMRMAFQEALIAFEKDEVPVGCVIVHNERVIARGYNLTETLNDVTAHAEMQSIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L + +YVTLEPCTMCA A+ ++I R+ GA + G ++ Sbjct: 61 SAANALGGKYLKDCTMYVTLEPCTMCAGALFWSQISRVVIGARDEHRGFLKQNINL---- 116 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H +I GI E R ++++FFK +R Sbjct: 117 --HPKTQISIGIMEDDCRNLVKEFFKSKR 143 >gi|50122182|ref|YP_051349.1| tRNA-specific adenosine deaminase [Pectobacterium atrosepticum SCRI1043] gi|49612708|emb|CAG76158.1| putative cytidine and deoxycytidylate deaminase [Pectobacterium atrosepticum SCRI1043] Length = 174 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 77/149 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M AL AQ A E+PVGAV VL+N+ I NR D TAHAEI+A+R Sbjct: 10 LRDNEYWMRYALTLAQRAQDEGEVPVGAVLVLDNEAIGEGWNRPIGHHDPTAHAEIMALR 69 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 G +L L E LYVTLEPC MCA A+ +RI RL YGAS+ K G + Sbjct: 70 QGGLVLQNYRLLETTLYVTLEPCIMCAGAMIHSRIGRLVYGASDEKTGAAGSLVDILRHP 129 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ + FF+ RR Sbjct: 130 GMNHQIVIESGVLADECSATLSAFFRMRR 158 >gi|237732543|ref|ZP_04563024.1| tRNA-specific adenosine deaminase [Citrobacter sp. 30_2] gi|226908082|gb|EEH94000.1| tRNA-specific adenosine deaminase [Citrobacter sp. 30_2] Length = 182 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G +L Sbjct: 28 WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGHHDPTAHAEIMALRQGGLVL 87 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 88 QNYRLLDATLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 147 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ ++ DFF+ RR Sbjct: 148 EVTEGVLRDECATLLSDFFRMRR 170 >gi|260550109|ref|ZP_05824323.1| cytosine/adenosine deaminase [Acinetobacter sp. RUH2624] gi|260406864|gb|EEX00343.1| cytosine/adenosine deaminase [Acinetobacter sp. RUH2624] Length = 167 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 59/140 (42%), Positives = 76/140 (54%), Gaps = 1/140 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A E+A+ AA + EIPVGAV V NK+I N L D TAHAEI AIR C++L Sbjct: 9 WMQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRSACQLL 68 Query: 67 SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 LPE LYVTLEPCTMC A+ ARI+ + +G PK G + + Q +H Sbjct: 69 KNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTVEPKAGSLVSTRQLLENGYYNHK 128 Query: 126 PEIYPGISEQRSRQIIQDFF 145 G ++ Q + FF Sbjct: 129 FTFEQGCLHEKCAQQLSLFF 148 >gi|166031359|ref|ZP_02234188.1| hypothetical protein DORFOR_01047 [Dorea formicigenerans ATCC 27755] gi|166028764|gb|EDR47521.1| hypothetical protein DORFOR_01047 [Dorea formicigenerans ATCC 27755] Length = 157 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+++A+ A E+P+G V V +KII+R NR K+ AHAE+ AIR + + Sbjct: 7 YMREAIKQAKKAYAIGEVPIGCVIVYQDKIIARGYNRRTIDKNTLAHAELQAIRKASKKM 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E +YVTLEPC MC+ AI +R+ R+ G NPK G + + +H Sbjct: 67 EDWRLEECTMYVTLEPCQMCSGAIVQSRMTRVVVGCMNPKAGCAGSILNLLQMPQFNHQV 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ Q+++ FFKE R Sbjct: 127 ELTTGVLEEECSQMMKTFFKELR 149 >gi|320157222|ref|YP_004189601.1| tRNA-specific adenosine-34 deaminase [Vibrio vulnificus MO6-24/O] gi|319932534|gb|ADV87398.1| tRNA-specific adenosine-34 deaminase [Vibrio vulnificus MO6-24/O] Length = 181 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 55/147 (37%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + VFM A+E A A E+PVGAV V + ++I+ N++ D TAHAEI +R Sbjct: 11 QDEVFMRRAIELAAIAESEGEVPVGAVLVKDGEVIAEGWNQSIGQHDATAHAEIQTLRQA 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + LYVTLEPC MCA A+ +R++R+ +GA + K G ++ Sbjct: 71 GQSLGNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLDLFSSQAA 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ E R +Q FFK RR Sbjct: 131 YHYATIEKGLLESECRDQLQAFFKRRR 157 >gi|323978411|gb|EGB73496.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia coli TW10509] Length = 167 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 11 WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 71 QNYRLIDATLYVTLEPCVMCAGAMIHSRISRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI ++ DFF+ RR Sbjct: 131 EITEGILADECAALLSDFFRMRR 153 >gi|330443784|ref|YP_004376770.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila pecorum E58] gi|328806894|gb|AEB41067.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila pecorum E58] Length = 156 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 84/149 (56%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM+ AL+EA+ A ++E+PVG V V ++KII+R N +L+D TAHAEIL I Sbjct: 3 IEKNLFFMNEALKEARKAYSQDEVPVGCVLVKDDKIIARGHNSVEKLQDPTAHAEILCIG 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L LY TLEPC MCA AI LARI R+ +GA + + G + + Sbjct: 63 AAAEFVQNWRLVNTTLYCTLEPCLMCAGAIQLARISRVVWGAPDLRLGACGSWINVFAQK 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H+ E E+ R +++ FF E+R Sbjct: 123 HPFHTVECSKIYCEESER-LMKQFFIEKR 150 >gi|169796135|ref|YP_001713928.1| putative deaminase [Acinetobacter baumannii AYE] gi|301597400|ref|ZP_07242408.1| putative deaminase [Acinetobacter baumannii AB059] gi|169149062|emb|CAM86939.1| putative deaminase [Acinetobacter baumannii AYE] Length = 167 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 59/140 (42%), Positives = 75/140 (53%), Gaps = 1/140 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A E+A+ AA + EIPVGAV V NK+I N L D TAHAEI AIR C L Sbjct: 9 WMQLAYEQAELAAKQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESL 68 Query: 67 SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 LPE LYVTLEPCTMC A+ ARI+ + +G + PK G + + Q +H Sbjct: 69 KNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGYYNHK 128 Query: 126 PEIYPGISEQRSRQIIQDFF 145 G ++ Q + FF Sbjct: 129 FTFEHGCLHEKCAQQLSLFF 148 >gi|295089886|emb|CBK75993.1| Cytosine/adenosine deaminases [Clostridium cf. saccharolyticum K10] Length = 214 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ +A+ A E+P+G V V KII R NR +V AHAEILAIR CRI+ Sbjct: 45 YMREAVRQAKKAWALGEVPIGCVIVHRGKIIGRGYNRRTTDGNVLAHAEILAIRKACRII 104 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E +YVTLEPC MCA AI ARI ++ G NPK G + +H Sbjct: 105 GDWRLEECTMYVTLEPCPMCAGAIVQARIPKVVIGCMNPKAGCAGSVLDLLHEEGFNHQA 164 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E G + ++++FF+E R Sbjct: 165 ETEVGTLGEECSSMLKEFFRELR 187 >gi|210613778|ref|ZP_03289892.1| hypothetical protein CLONEX_02100 [Clostridium nexile DSM 1787] gi|210150987|gb|EEA81995.1| hypothetical protein CLONEX_02100 [Clostridium nexile DSM 1787] Length = 158 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K +M A+++A+ A E+P+G V V +KII R NR K+ AHAE++AI+ Sbjct: 2 MNKDEKYMKEAIKQAKKAYALGEVPIGCVIVYEDKIIGRGYNRRTIDKNTIAHAEMMAIK 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L + +YVTLEPC MC+ AI +R++++ G NPK G + + Sbjct: 62 KASKKMDDWRLEDCTMYVTLEPCQMCSGAIVQSRMKKVVVGCMNPKAGCAGSILNLLQME 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++++FFKE R Sbjct: 122 EFNHQVELEIGVLEEECSALMKNFFKELR 150 >gi|251791894|ref|YP_003006614.1| tRNA-specific adenosine deaminase [Aggregatibacter aphrophilus NJ8700] gi|247533281|gb|ACS96527.1| tRNA-specific adenosine deaminase [Aggregatibacter aphrophilus NJ8700] Length = 174 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 61/144 (42%), Positives = 81/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL A A EIPVGAV V +II N + D TAHAEI+A+R G + Sbjct: 12 FMRHALMLADKAEALGEIPVGAVLVSAEGEIIGEGWNLSIIDSDPTAHAEIVALRQGGQR 71 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LYVTLEPCTMCA AI +RI+RL +GA++ K G + + F+ +H Sbjct: 72 LQNYRLLNATLYVTLEPCTMCAGAILHSRIKRLVFGAADYKTGAVGSRFHFFDDYKMNHV 131 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 EI G+ +Q + + FF++RR Sbjct: 132 VEITGGVLQQECSEKLSAFFQKRR 155 >gi|325273807|ref|ZP_08139995.1| CMP/dCMP deaminase zinc-binding protein [Pseudomonas sp. TJI-51] gi|324101066|gb|EGB98724.1| CMP/dCMP deaminase zinc-binding protein [Pseudomonas sp. TJI-51] Length = 159 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A A E+PVGAV V + ++I + NR D +AHAE++AIR + Sbjct: 14 YMRLALSLAAEGAALGEVPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRAAAKAA 73 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S LP LYVTLEPC+MCA I +R+ R+ +GA PK G +++ QF+ +H Sbjct: 74 SNYRLPGSTLYVTLEPCSMCAGLIVHSRVMRVVFGALEPKAGIVQSQGQFFGQGFLNHRV 133 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ Q QI+ DFFK RR Sbjct: 134 MVEGGVLAQECGQILSDFFKARR 156 >gi|293608246|ref|ZP_06690549.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828819|gb|EFF87181.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325122022|gb|ADY81545.1| tRNA-specific adenosine deaminase [Acinetobacter calcoaceticus PHEA-2] Length = 167 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 58/140 (41%), Positives = 75/140 (53%), Gaps = 1/140 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A E+A+ AA + EIPVGAV V N++I N L D TAHAEI AIR C L Sbjct: 9 WMQLAYEQAELAAQQGEIPVGAVLVSQNRVIGSGYNAPITLLDPTAHAEIQAIRAACSSL 68 Query: 67 SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 LPE LYVTLEPCTMC A+ ARI+ + +G PK G + + Q +H Sbjct: 69 ENYRLPEDTTLYVTLEPCTMCVGALVHARIKHVVFGTPEPKAGSLVSARQLLQQGYYNHR 128 Query: 126 PEIYPGISEQRSRQIIQDFF 145 G +++ Q + FF Sbjct: 129 FTFQNGCLQEKCAQQLSHFF 148 >gi|301510605|ref|ZP_07235842.1| putative deaminase [Acinetobacter baumannii AB058] Length = 167 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 59/140 (42%), Positives = 75/140 (53%), Gaps = 1/140 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A E+A+ AA + EIPVGAV V NK+I N L D TAHAEI AIR C L Sbjct: 9 WMQLAYEQAELAAKQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESL 68 Query: 67 SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 LPE LYVTLEPCTMC A+ ARI+ + +G + PK G + + Q +H Sbjct: 69 KNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGYYNHK 128 Query: 126 PEIYPGISEQRSRQIIQDFF 145 G ++ Q + FF Sbjct: 129 FTFEHGCLHEKCAQQLSLFF 148 >gi|255021639|ref|ZP_05293681.1| tRNA-specific adenosine-34 deaminase [Acidithiobacillus caldus ATCC 51756] gi|254968899|gb|EET26419.1| tRNA-specific adenosine-34 deaminase [Acidithiobacillus caldus ATCC 51756] Length = 178 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 82/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M ALE+A+ A+L E+PVGAV + + +++RA NR ++D AHAEIL +R R Sbjct: 27 WMGLALEQARCASLVGEVPVGAVLLSASGALLARAHNRPIAMQDPCAHAEILVLREAARA 86 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LYVTLEPC MCA A+ AR+ +L + A +PKGG + + H Sbjct: 87 LGNYRLLGTTLYVTLEPCAMCAGAMLQARVAQLVFAARDPKGGAVVSRLGVLDAEPRLHR 146 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 G + S+ ++QDFF+ RR Sbjct: 147 LRWREGPGARESQALLQDFFRARR 170 >gi|153830778|ref|ZP_01983445.1| zinc-binding domain protein [Vibrio cholerae 623-39] gi|148873734|gb|EDL71869.1| zinc-binding domain protein [Vibrio cholerae 623-39] Length = 193 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR + L Sbjct: 31 FMRRAIALATQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKAL 90 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ +H Sbjct: 91 SNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAAYHYA 150 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R +Q FF+ RR Sbjct: 151 TVEKGLLEEECRAQLQAFFQRRR 173 >gi|261820536|ref|YP_003258642.1| tRNA-specific adenosine deaminase [Pectobacterium wasabiae WPP163] gi|261604549|gb|ACX87035.1| CMP/dCMP deaminase zinc-binding protein [Pectobacterium wasabiae WPP163] Length = 168 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 61/143 (42%), Positives = 74/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL AQ A E+PVGAV VL+NK I NR D TAHAEI+A+R G +L Sbjct: 10 WMRYALALAQRAQDEGEVPVGAVLVLDNKAIGEGWNRPIGHHDPTAHAEIMALRQGGAVL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LYVTLEPC MCA A+ RI RL YGAS+ K G + +H Sbjct: 70 QNYRLLETTLYVTLEPCIMCAGAMIHGRIGRLVYGASDEKTGAAGSLLDILRHPGMNHQI 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I G+ + FF+ RR Sbjct: 130 VIESGVLAGECSATLSAFFRLRR 152 >gi|157157409|ref|YP_001463881.1| tRNA-specific adenosine deaminase [Escherichia coli E24377A] gi|193064070|ref|ZP_03045155.1| tRNA-specific adenosine deaminase [Escherichia coli E22] gi|194427252|ref|ZP_03059802.1| tRNA-specific adenosine deaminase [Escherichia coli B171] gi|293446913|ref|ZP_06663335.1| yfhC [Escherichia coli B088] gi|309794388|ref|ZP_07688811.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 145-7] gi|157079439|gb|ABV19147.1| tRNA-specific adenosine deaminase [Escherichia coli E24377A] gi|192929305|gb|EDV82914.1| tRNA-specific adenosine deaminase [Escherichia coli E22] gi|194414573|gb|EDX30845.1| tRNA-specific adenosine deaminase [Escherichia coli B171] gi|195183132|dbj|BAG66679.1| putative deaminase [Escherichia coli O111:H-] gi|291323743|gb|EFE63171.1| yfhC [Escherichia coli B088] gi|308121844|gb|EFO59106.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 145-7] gi|323159237|gb|EFZ45226.1| tRNA-specific adenosine deaminase [Escherichia coli E128010] Length = 178 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 22 WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 82 QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGAHDAKTGAAGSLMDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI ++ DFF+ RR Sbjct: 142 EITEGILADECAALLSDFFRMRR 164 >gi|56478507|ref|YP_160096.1| cytosine/adenosine deaminase [Aromatoleum aromaticum EbN1] gi|56314550|emb|CAI09195.1| probable cytosine/adenosine deaminases [Aromatoleum aromaticum EbN1] Length = 154 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+A+ A +E+PVGAV VL+ +I+ R N+ D +AHAE++A+R L Sbjct: 6 FMRAALEQARMAGACDEVPVGAVVVLDGEIVGRGFNQPIRRHDPSAHAEVMALRDAGERL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 P +L+VTLEPC MC+ AI AR+ R+ +GA +P+ G + + +H Sbjct: 66 GNYRFPGCELFVTLEPCAMCSGAIMHARVARVVFGARDPRTGVAGSIIDLFAERRLNHHA 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ +++ FF RR Sbjct: 126 EVAGGVLADECGRLLSGFFAARR 148 >gi|116617403|ref|YP_817774.1| tRNA-adenosine deaminase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096250|gb|ABJ61401.1| tRNA-adenosine deaminase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 168 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 59/145 (40%), Positives = 79/145 (54%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL EA+ A E+P+GAV V N++I+ A N + TAHAE+LAI Sbjct: 13 DYFMQEALNEAKIAQSEGEVPIGAVIVYENQMIACAHNHREADQLATAHAELLAIESANT 72 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L L+VTLEPC MCA AI ARI +YYGA++PKGG + +H Sbjct: 73 KLKSWRLENTALFVTLEPCIMCAGAIINARIPVVYYGANDPKGGATRSLYSLLEDNRLNH 132 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++Y GI + S ++Q FF R Sbjct: 133 MVKVYEGIRGEESGLLLQRFFSNIR 157 >gi|326577134|gb|EGE27028.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis O35E] Length = 181 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M+ ALE A+ A EIPVGAV V +I+ N +D TAHAEI+A+R C L+ Sbjct: 29 MNRALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRACETLN 88 Query: 68 QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP+ LYVTLEPCTMC A+ ARI + +GA PK G + + + A +H Sbjct: 89 NYRLPKGCILYVTLEPCTMCFGALIHARISHVVFGAFEPKAGVVISQLKLPEQAFYNHRL 148 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +Y G+ +S ++ FF++RR Sbjct: 149 SVYGGLLADKSSALLSGFFRQRR 171 >gi|319946112|ref|ZP_08020360.1| tRNA-specific adenosine deaminase [Streptococcus australis ATCC 700641] gi|319747758|gb|EFW00004.1| tRNA-specific adenosine deaminase [Streptococcus australis ATCC 700641] Length = 170 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A EIP+G V V + +II R N EL+ HAE++AI Sbjct: 6 LEEKEAFMREALKEAEIALAHEEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEVMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + L+VT+EPC MC+ AI LARI ++ YGA+N K GG + T Sbjct: 66 EANQKEKSWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIYGATNQKFGGAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+Q FF++ R Sbjct: 126 RLNHRVEVETGILEAECAAIMQTFFRQGR 154 >gi|193068331|ref|ZP_03049294.1| tRNA-specific adenosine deaminase [Escherichia coli E110019] gi|260845189|ref|YP_003222967.1| tRNA-specific adenosine deaminase [Escherichia coli O103:H2 str. 12009] gi|192958283|gb|EDV88723.1| tRNA-specific adenosine deaminase [Escherichia coli E110019] gi|257760336|dbj|BAI31833.1| tRNA-specific adenosine deaminase [Escherichia coli O103:H2 str. 12009] Length = 167 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 11 WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 71 QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGAHDAKTGAAGSLMDVLHHPGMNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI ++ DFF+ RR Sbjct: 131 EITEGILADECAALLSDFFRMRR 153 >gi|148244957|ref|YP_001219651.1| hypothetical protein COSY_0821 [Candidatus Vesicomyosocius okutanii HA] gi|146326784|dbj|BAF61927.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii HA] Length = 153 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ A+E+A+ A EIPVGA+ + NN++I A N+ D TAHAEI +R+ + L Sbjct: 8 WMTLAIEQAKQAQQIGEIPVGAILIQNNQLIGGAHNQTILNNDPTAHAEIQLLRIAGKKL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVTLEPCTMC AI ARI + +GA + K G + +H Sbjct: 68 NNYRLSGTTLYVTLEPCTMCLGAIVHARISCIVFGAYDKKSGACGSCIDLLNNRCFNHLI 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI + + ++QDFFK +R Sbjct: 128 SIKSGILADQCKNLLQDFFKNKR 150 >gi|283796876|ref|ZP_06346029.1| tRNA-specific adenosine deaminase [Clostridium sp. M62/1] gi|291075284|gb|EFE12648.1| tRNA-specific adenosine deaminase [Clostridium sp. M62/1] Length = 215 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ +A+ A E+P+G V V KII R NR +V AHAEILAIR CRI+ Sbjct: 46 YMREAVRQAKKAWALGEVPIGCVIVHRGKIIGRGYNRRTTDGNVLAHAEILAIRKACRII 105 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E +YVTLEPC MCA AI ARI ++ G NPK G + +H Sbjct: 106 GDWRLEECTMYVTLEPCPMCAGAIVQARIPKVVIGCMNPKAGCAGSVLDLLHEEGFNHQA 165 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E G + ++++FF+E R Sbjct: 166 ETEVGTLGEECSSMLKEFFRELR 188 >gi|160894462|ref|ZP_02075238.1| hypothetical protein CLOL250_02014 [Clostridium sp. L2-50] gi|156863773|gb|EDO57204.1| hypothetical protein CLOL250_02014 [Clostridium sp. L2-50] Length = 214 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 81/144 (56%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++M A++ AQ A ++ ++P+G V V +NK+I+R N+ K AHAE+LAI + Sbjct: 61 IYMKKAIKLAQKAYVQGDVPIGCVIVKDNKVIARGYNKRNLKKTTLAHAELLAIEQASKK 120 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + +YVTLEPC MCA AI ARI ++ G N K G + + ++ +H Sbjct: 121 LGDWRLEDCTMYVTLEPCQMCAGAIVQARIPKVVIGCMNKKAGCAGSILNMFDMSAFNHQ 180 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E GI ++ +++DFF + R Sbjct: 181 VETVYGICQEECSSLMKDFFADLR 204 >gi|330504655|ref|YP_004381524.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina NK-01] gi|328918941|gb|AEB59772.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina NK-01] Length = 158 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ A + E+PVGAV V + +++ + N D +AHAE++AIR + + Sbjct: 15 FMRLALAQARLGAGQGEVPVGAVLVQDGEVVGQGFNCPILRHDPSAHAEMVAIRAAAQSV 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP LYVTLEPC+MCA I ARI R+ + AS P+ G + QF+ +H Sbjct: 75 QNYRLPGSTLYVTLEPCSMCAGLIVHARIARVVFAASEPRAGVAISQGQFFDQGFLNHRV 134 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + S +++DFFK RR Sbjct: 135 LVEGGLLAEESGALLKDFFKARR 157 >gi|261880583|ref|ZP_06007010.1| tRNA-specific adenosine deaminase [Prevotella bergensis DSM 17361] gi|270332702|gb|EFA43488.1| tRNA-specific adenosine deaminase [Prevotella bergensis DSM 17361] Length = 151 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 56/148 (37%), Positives = 83/148 (56%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +K +M A++EA+ A EIP+GA+ V ++IISRA N+ L DVTAHAE+LAI Sbjct: 9 QKDERYMRMAIQEAEAAFEEGEIPIGAIVVCRDRIISRAHNQTETLNDVTAHAEMLAITA 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + LP+ LYVT+EPC MCA AI ++I R+ YG K G + Y Sbjct: 69 AANTMGGKYLPDCTLYVTVEPCVMCAGAIGWSQIGRIVYGVGEEK-----RGYKRYAPDA 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ ++ + ++ FFK +R Sbjct: 124 LHPKTTVTSGVLQEECKALMISFFKNKR 151 >gi|169633380|ref|YP_001707116.1| putative deaminase [Acinetobacter baumannii SDF] gi|169152172|emb|CAP01075.1| putative deaminase [Acinetobacter baumannii] Length = 166 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 59/140 (42%), Positives = 75/140 (53%), Gaps = 1/140 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A E+A+ AA + EIPVGAV V NK+I N L D TAHAEI AIR C L Sbjct: 9 WMQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESL 68 Query: 67 SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 LPE LYVTLEPCTMC A+ ARI+ + +G + PK G + + Q +H Sbjct: 69 KNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGYYNHK 128 Query: 126 PEIYPGISEQRSRQIIQDFF 145 G ++ Q + FF Sbjct: 129 FTFEHGCLHEKCAQQLSLFF 148 >gi|27363814|ref|NP_759342.1| tRNA-specific adenosine-34 deaminase [Vibrio vulnificus CMCP6] gi|27359931|gb|AAO08869.1| tRNA-specific adenosine-34 deaminase [Vibrio vulnificus CMCP6] Length = 181 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 55/147 (37%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + VFM A+E A A E+PVGAV V + ++I+ N++ D TAHAEI +R Sbjct: 11 QDEVFMRRAIELAAIAESEGEVPVGAVLVKDGEVIAEGWNQSIGQHDATAHAEIQTLRQA 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + LYVTLEPC MCA A+ +R++R+ +GA + K G ++ Sbjct: 71 GQSLGNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLDLFSSQAA 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ E R+ +Q FFK RR Sbjct: 131 YHYATIEKGLLELECREQLQAFFKRRR 157 >gi|289825514|ref|ZP_06544721.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 172 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G +L Sbjct: 11 WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 71 QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAARSLIDVLHHPGMNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ ++ DFF+ RR Sbjct: 131 EIIEGVLRDECATLLSDFFRMRR 153 >gi|294635160|ref|ZP_06713669.1| tRNA-specific adenosine deaminase [Edwardsiella tarda ATCC 23685] gi|291091465|gb|EFE24026.1| tRNA-specific adenosine deaminase [Edwardsiella tarda ATCC 23685] Length = 182 Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 54/129 (41%), Positives = 75/129 (58%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 + E+PVGAV VL++++I NR D TAHAEI+A++ G +L L E LYVTL Sbjct: 33 QGEVPVGAVLVLDDQVIGEGWNRPITRHDPTAHAEIMALQQGGAVLQNYRLLEATLYVTL 92 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A+ +RIRRL YGAS+ K G + +H E+ G+ + Sbjct: 93 EPCVMCAGAMVHSRIRRLVYGASDLKTGAAGSLLDVLGHPGMNHRIEVCGGVLAEACAAQ 152 Query: 141 IQDFFKERR 149 + DFF++RR Sbjct: 153 LSDFFRQRR 161 >gi|117929225|ref|YP_873776.1| tRNA-adenosine deaminase [Acidothermus cellulolyticus 11B] gi|117649688|gb|ABK53790.1| tRNA-adenosine deaminase [Acidothermus cellulolyticus 11B] Length = 144 Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA A ++PVGA+ + ++ R N+ D TAHAEI+A+R L Sbjct: 1 MRLALQEAARAEKVADVPVGAIVLGPGGDVLGRGHNQREAAADPTAHAEIVALRAAAWRL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPCTMCA AI LAR+ RL YGA +PK G + + +H P Sbjct: 61 GRWRLDGCTLVVTLEPCTMCAGAIVLARLDRLVYGAVDPKSGAVGSLWDVVRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ Q+++ FF RR Sbjct: 121 EVIAGVLADECGQVLRTFFSGRR 143 >gi|332851789|ref|ZP_08433714.1| cytidine and deoxycytidylate deaminase zinc-binding region [Acinetobacter baumannii 6013150] gi|332865831|ref|ZP_08436615.1| cytidine and deoxycytidylate deaminase zinc-binding region [Acinetobacter baumannii 6013113] gi|332729796|gb|EGJ61131.1| cytidine and deoxycytidylate deaminase zinc-binding region [Acinetobacter baumannii 6013150] gi|332735043|gb|EGJ66128.1| cytidine and deoxycytidylate deaminase zinc-binding region [Acinetobacter baumannii 6013113] Length = 170 Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 59/140 (42%), Positives = 75/140 (53%), Gaps = 1/140 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A E+A+ AA + EIPVGAV V NK+I N L D TAHAEI AIR C L Sbjct: 9 WMQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESL 68 Query: 67 SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 LPE LYVTLEPCTMC A+ ARI+ + +G + PK G + + Q +H Sbjct: 69 KNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGYYNHK 128 Query: 126 PEIYPGISEQRSRQIIQDFF 145 G ++ Q + FF Sbjct: 129 FTFEHGCLHEKCAQQLSLFF 148 >gi|260555185|ref|ZP_05827406.1| cytosine/adenosine deaminase [Acinetobacter baumannii ATCC 19606] gi|260411727|gb|EEX05024.1| cytosine/adenosine deaminase [Acinetobacter baumannii ATCC 19606] Length = 167 Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 59/140 (42%), Positives = 75/140 (53%), Gaps = 1/140 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A E+A+ AA + EIPVGAV V NK+I N L D TAHAEI AIR C L Sbjct: 9 WMQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESL 68 Query: 67 SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 LPE LYVTLEPCTMC A+ ARI+ + +G + PK G + + Q +H Sbjct: 69 KNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGYYNHK 128 Query: 126 PEIYPGISEQRSRQIIQDFF 145 G ++ Q + FF Sbjct: 129 FTFEHGCLHEKCAQQLSLFF 148 >gi|109899420|ref|YP_662675.1| CMP/dCMP deaminase, zinc-binding [Pseudoalteromonas atlantica T6c] gi|109701701|gb|ABG41621.1| tRNA-adenosine deaminase [Pseudoalteromonas atlantica T6c] Length = 162 Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 56/149 (37%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ ++M AL A AA EIPVGAV V + KI+ N++ L D +AHAE+LAIR Sbjct: 3 LEQDQLWMRHALSLASKAAQAGEIPVGAVLVKDQKIVGEGWNQSITLNDPSAHAEMLAIR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + LYVTLEPCTMCA + +RI+RL +GA + K G + Sbjct: 63 QAGINVKNYRLIDTTLYVTLEPCTMCAGLLVHSRIKRLVFGAYDAKTGAAGSIMDVLNDT 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + + I FF++RR Sbjct: 123 RLNHQVEVVGGVLGEECGETISAFFRQRR 151 >gi|304385470|ref|ZP_07367815.1| tRNA-specific adenosine deaminase [Pediococcus acidilactici DSM 20284] gi|304328677|gb|EFL95898.1| tRNA-specific adenosine deaminase [Pediococcus acidilactici DSM 20284] Length = 161 Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 53/146 (36%), Positives = 82/146 (56%), Gaps = 3/146 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+EAQ A + +E+P+GAV V + KII R N +D T HAE+LAI C L Sbjct: 12 YMGEALKEAQFAKMIDEVPIGAVVVHDGKIIGRGHNLREHSQDATTHAEVLAITEACAYL 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ I ++I +Y+GA + K G + + +H Sbjct: 72 RSWRLWDCQLFVTIEPCLMCSGTIINSQIPEVYFGARDSKAGAVRSLYTVLEDQRLNHQV 131 Query: 127 EIYPGISEQRSRQIIQDFFK---ERR 149 E+ G++ ++ +++ FFK ERR Sbjct: 132 EVREGVAADQAAGLMKSFFKAIRERR 157 >gi|209527530|ref|ZP_03276032.1| CMP/dCMP deaminase zinc-binding [Arthrospira maxima CS-328] gi|209492018|gb|EDZ92371.1| CMP/dCMP deaminase zinc-binding [Arthrospira maxima CS-328] Length = 157 Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 59/144 (40%), Positives = 76/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL+ A E+PVGAV V K+I++ NR +D TAHAEI+A+R ++ Sbjct: 11 WMRQALKLGAAAGEAGEVPVGAVIVNQQGKLIAQGENRRERDRDPTAHAEIIALRQASQV 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LYVTLEPC MCA AI ARI L YGA +PK G I +H Sbjct: 71 LGDWHLDTCTLYVTLEPCPMCAGAIIQARIGLLVYGADDPKTGSIRTVFNLPDSPASYHR 130 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI E RQ +Q +F + R Sbjct: 131 LPVLGGILESSCRQQLQSWFAQHR 154 >gi|90108580|pdb|1Z3A|A Chain A, Crystal Structure Of Trna Adenosine Deaminase Tada From Escherichia Coli gi|90108581|pdb|1Z3A|B Chain B, Crystal Structure Of Trna Adenosine Deaminase Tada From Escherichia Coli Length = 168 Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 12 WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 72 QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI ++ DFF+ RR Sbjct: 132 EITEGILADECAALLSDFFRMRR 154 >gi|218929978|ref|YP_002347853.1| tRNA-specific adenosine deaminase [Yersinia pestis CO92] gi|115348589|emb|CAL21531.1| putative zinc-binding protein [Yersinia pestis CO92] Length = 159 Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 59/142 (41%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A A E+PVGAV VL NK+I NR D TAHAEI+A+R G + + Sbjct: 1 MRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQGGQAVQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + +H E Sbjct: 61 NYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGMNHQIE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + GI + FF++RR Sbjct: 121 VSAGILAIACSHQLSAFFRQRR 142 >gi|150019816|ref|YP_001312070.1| CMP/dCMP deaminase, zinc-binding [Clostridium beijerinckii NCIMB 8052] gi|149906281|gb|ABR37114.1| CMP/dCMP deaminase, zinc-binding [Clostridium beijerinckii NCIMB 8052] Length = 149 Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 59/146 (40%), Positives = 82/146 (56%), Gaps = 7/146 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A EEA+ A + EIPVGAV VL++KII RA N L D TAHAEILAI+ + + Sbjct: 4 FLKIAKEEAKMAMKKGEIPVGAVIVLDDKIIGRAHNLKETLNDSTAHAEILAIKEASKFI 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFYTLATCH 123 L ++YVTLEPC MCA AI +RI ++Y G N G + + T L + Sbjct: 64 GDWRLNRAEMYVTLEPCPMCAGAIIQSRISKVYIGTFNKDMGACGSVIDVTDNKWLNSFV 123 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 + +Y ++ I+ +FF +RR Sbjct: 124 STKWLY----DKECSDIMLEFFCQRR 145 >gi|313812411|gb|EFS50125.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL025PA1] gi|327334354|gb|EGE76065.1| tRNA-specific adenosine deaminase [Propionibacterium acnes HL097PA1] Length = 149 Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL+ A+ AA ++P+GAV + N +++S AGN D TAHAE+LAIR Sbjct: 1 MTQALDVARRAATWGDVPIGAVILGANGEVLSEAGNERERTGDPTAHAEVLAIRRAAEAR 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPCTMCA I ARI R+ +GA +PK G + + H P Sbjct: 61 DGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDPKAGAVSSLFDVMRDPRLPHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + S ++++FF R Sbjct: 121 KVVTGVMAEESSALLREFFDGHR 143 >gi|331086590|ref|ZP_08335668.1| hypothetical protein HMPREF0987_01971 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330410423|gb|EGG89855.1| hypothetical protein HMPREF0987_01971 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 163 Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ +A+ A E+P+G V V +KII+R NR K+ AHAE++AI+ Sbjct: 1 MNQDEKYMKEAIRQAKKAYALKEVPIGCVIVYQDKIIARGYNRRTIDKNTLAHAELIAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + +YVTLEPC MC+ AI +R++++ G NPK G + + Sbjct: 61 KASRKMDDWRLEDCTMYVTLEPCQMCSGAIVQSRMKKVVVGCMNPKAGCAGSIFNLLQVP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ Q+++ FF+E R Sbjct: 121 QFNHQVELEIGVLEEECSQLMKSFFRELR 149 >gi|326575668|gb|EGE25591.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis CO72] Length = 181 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 80/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M+ ALE A+ A EIPVGAV V +I+ N +D TAHAEI+A+R C L+ Sbjct: 29 MNRALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRACETLN 88 Query: 68 QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP+ LYVTLEPCTMC + ARI R+ +GA PK G + + + +H Sbjct: 89 NYRLPKGCILYVTLEPCTMCFGTLIHARISRVVFGAFEPKAGVVVSQLKLPEQVFYNHHL 148 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +Y G+ +S ++ FF++RR Sbjct: 149 SVYGGLLADKSSALLSGFFRQRR 171 >gi|110806489|ref|YP_690009.1| tRNA-specific adenosine deaminase [Shigella flexneri 5 str. 8401] gi|110616037|gb|ABF04704.1| putative deaminase [Shigella flexneri 5 str. 8401] Length = 167 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 11 WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 71 QNYRLIDATLYVTLEPCVMCAGAMLHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI ++ DFF+ RR Sbjct: 131 EITEGILADECAALLSDFFRMRR 153 >gi|320539250|ref|ZP_08038920.1| putative cytidine and deoxycytidylate deaminase zinc-binding protein [Serratia symbiotica str. Tucson] gi|320030642|gb|EFW12651.1| putative cytidine and deoxycytidylate deaminase zinc-binding protein [Serratia symbiotica str. Tucson] Length = 170 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A A E+PVGA+ VL+N++I NR D TAHAEI+A+R G +L Sbjct: 10 WMCQALRLALRAQEEGEVPVGALLVLDNQVIGEGWNRPIGRHDPTAHAEIMALRQGGAVL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA A+ +RIRRL YG ++ K G + +H Sbjct: 70 QNYRLLNATLYVTLEPCVMCAGAMVHSRIRRLVYGTADEKTGAAGSLMDILRHPGMNHQV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ ++ FF+ RR Sbjct: 130 EIASGVLADECAAMLSHFFRLRR 152 >gi|260598940|ref|YP_003211511.1| tRNA-specific adenosine deaminase [Cronobacter turicensis z3032] gi|260218117|emb|CBA32906.1| tRNA-specific adenosine deaminase [Cronobacter turicensis z3032] Length = 196 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL AQ A E+PVGAV V NN++I NR D TAHAEI+A+R G +L Sbjct: 34 WMRHALTLAQRAWDEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 93 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ RI L +GA + K G + + +H Sbjct: 94 QNYRLLDTTLYVTLEPCVMCAGAMVHGRIGTLVFGARDAKTGAVGSLMDITGHPGMNHQV 153 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI ++ FF++RR Sbjct: 154 QVIEGILATECSAMLSAFFRQRR 176 >gi|24113886|ref|NP_708396.1| tRNA-specific adenosine deaminase [Shigella flexneri 2a str. 301] gi|30063946|ref|NP_838117.1| tRNA-specific adenosine deaminase [Shigella flexneri 2a str. 2457T] gi|82545011|ref|YP_408958.1| tRNA-specific adenosine deaminase [Shigella boydii Sb227] gi|89109365|ref|AP_003145.1| tRNA-specific adenosine deaminase [Escherichia coli str. K-12 substr. W3110] gi|157162036|ref|YP_001459354.1| tRNA-specific adenosine deaminase [Escherichia coli HS] gi|187730453|ref|YP_001881338.1| tRNA-specific adenosine deaminase [Shigella boydii CDC 3083-94] gi|188496019|ref|ZP_03003289.1| tRNA-specific adenosine deaminase [Escherichia coli 53638] gi|209920038|ref|YP_002294122.1| tRNA-specific adenosine deaminase [Escherichia coli SE11] gi|218547914|ref|YP_002381705.1| tRNA-specific adenosine deaminase [Escherichia fergusonii ATCC 35469] gi|218555084|ref|YP_002387997.1| tRNA-specific adenosine deaminase [Escherichia coli IAI1] gi|218696186|ref|YP_002403853.1| tRNA-specific adenosine deaminase [Escherichia coli 55989] gi|254162534|ref|YP_003045642.1| tRNA-specific adenosine deaminase [Escherichia coli B str. REL606] gi|256017292|ref|ZP_05431157.1| tRNA-specific adenosine deaminase [Shigella sp. D9] gi|293410974|ref|ZP_06654550.1| tRNA-specific adenosine deaminase [Escherichia coli B354] gi|300817664|ref|ZP_07097879.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 107-1] gi|300820763|ref|ZP_07100913.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 119-7] gi|300904258|ref|ZP_07122117.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 84-1] gi|300920727|ref|ZP_07137133.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 115-1] gi|300927064|ref|ZP_07142816.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 182-1] gi|300927685|ref|ZP_07143253.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 187-1] gi|300951723|ref|ZP_07165542.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 116-1] gi|300958800|ref|ZP_07170912.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 175-1] gi|301022068|ref|ZP_07185995.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 196-1] gi|301024846|ref|ZP_07188483.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 69-1] gi|301302925|ref|ZP_07209053.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 124-1] gi|301330339|ref|ZP_07222986.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 78-1] gi|301648323|ref|ZP_07248063.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 146-1] gi|312973195|ref|ZP_07787367.1| tRNA-specific adenosine deaminase [Escherichia coli 1827-70] gi|331643182|ref|ZP_08344317.1| tRNA-specific adenosine deaminase [Escherichia coli H736] gi|331664126|ref|ZP_08365036.1| tRNA-specific adenosine deaminase [Escherichia coli TA143] gi|331669308|ref|ZP_08370156.1| tRNA-specific adenosine deaminase [Escherichia coli TA271] gi|331678554|ref|ZP_08379229.1| tRNA-specific adenosine deaminase [Escherichia coli H591] gi|331684208|ref|ZP_08384804.1| tRNA-specific adenosine deaminase [Escherichia coli H299] gi|332278286|ref|ZP_08390699.1| tRNA-specific adenosine deaminase [Shigella sp. D9] gi|296183|emb|CAA51064.1| unnamed protein product [Escherichia coli] gi|987637|dbj|BAA10909.1| YFHC-ECOLI protein [Escherichia coli K-12] gi|1033148|gb|AAA79821.1| alternate name yfhC; orf178 of GenBank Accession Number X72336 [Escherichia coli str. K-12 substr. MG1655] gi|24052985|gb|AAN44103.1| putative deaminase [Shigella flexneri 2a str. 301] gi|30042202|gb|AAP17927.1| putative deaminase [Shigella flexneri 2a str. 2457T] gi|81246422|gb|ABB67130.1| putative deaminase [Shigella boydii Sb227] gi|85675450|dbj|BAE76735.1| tRNA-specific adenosine deaminase [Escherichia coli str. K12 substr. W3110] gi|157067716|gb|ABV06971.1| tRNA-specific adenosine deaminase [Escherichia coli HS] gi|187427445|gb|ACD06719.1| tRNA-specific adenosine deaminase [Shigella boydii CDC 3083-94] gi|188491218|gb|EDU66321.1| tRNA-specific adenosine deaminase [Escherichia coli 53638] gi|209913297|dbj|BAG78371.1| putative deaminase [Escherichia coli SE11] gi|218352918|emb|CAU98717.1| tRNA-specific adenosine deaminase [Escherichia coli 55989] gi|218355455|emb|CAQ88064.1| tRNA-specific adenosine deaminase [Escherichia fergusonii ATCC 35469] gi|218361852|emb|CAQ99452.1| tRNA-specific adenosine deaminase [Escherichia coli IAI1] gi|253974435|gb|ACT40106.1| tRNA-specific adenosine deaminase [Escherichia coli B str. REL606] gi|253978602|gb|ACT44272.1| tRNA-specific adenosine deaminase [Escherichia coli BL21(DE3)] gi|281601959|gb|ADA74943.1| tRNA-specific adenosine deaminase [Shigella flexneri 2002017] gi|291471442|gb|EFF13926.1| tRNA-specific adenosine deaminase [Escherichia coli B354] gi|299881373|gb|EFI89584.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 196-1] gi|300314548|gb|EFJ64332.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 175-1] gi|300396377|gb|EFJ79915.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 69-1] gi|300403791|gb|EFJ87329.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 84-1] gi|300412298|gb|EFJ95608.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 115-1] gi|300416948|gb|EFK00259.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 182-1] gi|300449007|gb|EFK12627.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 116-1] gi|300464238|gb|EFK27731.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 187-1] gi|300526516|gb|EFK47585.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 119-7] gi|300529652|gb|EFK50714.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 107-1] gi|300841860|gb|EFK69620.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 124-1] gi|300843673|gb|EFK71433.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 78-1] gi|301073599|gb|EFK88405.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 146-1] gi|309702891|emb|CBJ02222.1| tRNA-specific adenosine deaminase [Escherichia coli ETEC H10407] gi|310331790|gb|EFP99025.1| tRNA-specific adenosine deaminase [Escherichia coli 1827-70] gi|315137183|dbj|BAJ44342.1| tRNA-specific adenosine deaminase [Escherichia coli DH1] gi|315256586|gb|EFU36554.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 85-1] gi|315615821|gb|EFU96453.1| tRNA-specific adenosine deaminase [Escherichia coli 3431] gi|320196395|gb|EFW71019.1| tRNA-specific adenosine-34 deaminase [Escherichia coli WV_060327] gi|323156217|gb|EFZ42376.1| tRNA-specific adenosine deaminase [Escherichia coli EPECa14] gi|323170158|gb|EFZ55811.1| tRNA-specific adenosine deaminase [Escherichia coli LT-68] gi|323177311|gb|EFZ62899.1| tRNA-specific adenosine deaminase [Escherichia coli 1180] gi|323184561|gb|EFZ69935.1| tRNA-specific adenosine deaminase [Escherichia coli 1357] gi|324020017|gb|EGB89236.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 117-3] gi|325496361|gb|EGC94220.1| tRNA-specific adenosine deaminase [Escherichia fergusonii ECD227] gi|331039980|gb|EGI12200.1| tRNA-specific adenosine deaminase [Escherichia coli H736] gi|331059925|gb|EGI31902.1| tRNA-specific adenosine deaminase [Escherichia coli TA143] gi|331064502|gb|EGI36413.1| tRNA-specific adenosine deaminase [Escherichia coli TA271] gi|331075014|gb|EGI46334.1| tRNA-specific adenosine deaminase [Escherichia coli H591] gi|331079160|gb|EGI50362.1| tRNA-specific adenosine deaminase [Escherichia coli H299] gi|332100638|gb|EGJ03984.1| tRNA-specific adenosine deaminase [Shigella sp. D9] gi|333000545|gb|EGK20124.1| tRNA-specific adenosine deaminase [Shigella flexneri VA-6] Length = 178 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 22 WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 82 QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI ++ DFF+ RR Sbjct: 142 EITEGILADECAALLSDFFRMRR 164 >gi|282897517|ref|ZP_06305518.1| Cytidine/deoxycytidylate deaminase, zinc-binding region protein [Raphidiopsis brookii D9] gi|281197612|gb|EFA72507.1| Cytidine/deoxycytidylate deaminase, zinc-binding region protein [Raphidiopsis brookii D9] Length = 185 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 60/144 (41%), Positives = 78/144 (54%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +MS AL+ AQ A E+PVG + V +I + NR + +D TAHAEI+AIR R Sbjct: 20 WMSEALKLAQIAGDAGEVPVGCIIVNSQGDLIGQGENRKQRDQDPTAHAEIVAIRSAART 79 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + LYVTLEPC MCA AI AR++ L Y +PK G I + +H Sbjct: 80 LQNWHLDQCTLYVTLEPCPMCAGAIIHARLQTLVYAVDDPKTGAIRTVINIPSSPASNHR 139 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 I GI E SRQ +Q +F +R Sbjct: 140 LRIIGGILESASRQQLQSWFVYQR 163 >gi|289450534|ref|YP_003475019.1| cytidine and deoxycytidylate deaminase zinc-binding region [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185081|gb|ADC91506.1| cytidine and deoxycytidylate deaminase zinc-binding region [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 149 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 55/142 (38%), Positives = 75/142 (52%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL +A + + E P+GAV V +I++ N + +T HAEI AI R L Sbjct: 1 MRRALHQAALSERKGEAPIGAVIVYQGRIVAHGRNSRQNSNLITGHAEISAILQAERKLK 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 LPE D+YVTLEPC MCA AI ARIR +Y+GAS+PKGG + + + L +H Sbjct: 61 SWRLPECDIYVTLEPCIMCAGAIQQARIRHVYFGASDPKGGAVVSCGNIFDLPGLNHHVG 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I + +FF+ R Sbjct: 121 YTGAILADECSTALSNFFRNLR 142 >gi|298207416|ref|YP_003715595.1| putative cytosine/adenosine deaminase [Croceibacter atlanticus HTCC2559] gi|83850052|gb|EAP87920.1| putative cytosine/adenosine deaminase [Croceibacter atlanticus HTCC2559] Length = 149 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 81/143 (56%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+ A + EIPVGA+ V NN II+R+ N L DVTAHAE+ I + Sbjct: 10 FMKKALLEAEEAYEKGEIPVGAIVVANNTIIARSHNLTELLNDVTAHAEMQVITSAANHI 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC MCA A+ ++I ++ +GA + + G GT+ H Sbjct: 70 GGKYLTDCTLYVTLEPCQMCAGALYWSQISKIVFGAEDTQRGYRVMGTKL------HPKT 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + + +++ FF ERR Sbjct: 124 KVVSGVLAEDASLLLKRFFIERR 146 >gi|322376101|ref|ZP_08050611.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus sp. C300] gi|321279051|gb|EFX56094.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus sp. C300] Length = 155 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 79/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 VEEKEAFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 65 NANVSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 125 RLNHRVEVEAGILEDDCAAIMQDFFRNRR 153 >gi|170767485|ref|ZP_02901938.1| tRNA-specific adenosine deaminase [Escherichia albertii TW07627] gi|170123819|gb|EDS92750.1| tRNA-specific adenosine deaminase [Escherichia albertii TW07627] Length = 178 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 22 WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 82 QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI ++ DFF+ RR Sbjct: 142 EITEGILADECAALLSDFFRMRR 164 >gi|74313082|ref|YP_311501.1| tRNA-specific adenosine deaminase [Shigella sonnei Ss046] gi|73856559|gb|AAZ89266.1| putative deaminase [Shigella sonnei Ss046] gi|323169455|gb|EFZ55128.1| tRNA-specific adenosine deaminase [Shigella sonnei 53G] Length = 178 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 22 WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 82 QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI ++ DFF+ RR Sbjct: 142 EITEGILADECAALLSDFFRMRR 164 >gi|293364574|ref|ZP_06611295.1| tRNA-specific adenosine deaminase [Streptococcus oralis ATCC 35037] gi|307702826|ref|ZP_07639774.1| tRNA-specific adenosine deaminase [Streptococcus oralis ATCC 35037] gi|291316832|gb|EFE57264.1| tRNA-specific adenosine deaminase [Streptococcus oralis ATCC 35037] gi|307623506|gb|EFO02495.1| tRNA-specific adenosine deaminase [Streptococcus oralis ATCC 35037] Length = 155 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 79/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 VEEKEAFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 65 NANVSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 125 RLNHRVEVETGILEDDCAAIMQDFFRNRR 153 >gi|145698301|ref|NP_417054.2| tRNA-specific adenosine deaminase [Escherichia coli str. K-12 substr. MG1655] gi|170082169|ref|YP_001731489.1| tRNA-specific adenosine deaminase [Escherichia coli str. K-12 substr. DH10B] gi|170682913|ref|YP_001744748.1| tRNA-specific adenosine deaminase [Escherichia coli SMS-3-5] gi|191167978|ref|ZP_03029780.1| tRNA-specific adenosine deaminase [Escherichia coli B7A] gi|194437606|ref|ZP_03069702.1| tRNA-specific adenosine deaminase [Escherichia coli 101-1] gi|238901724|ref|YP_002927520.1| tRNA-specific adenosine deaminase [Escherichia coli BW2952] gi|253772543|ref|YP_003035374.1| tRNA-specific adenosine deaminase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|256021756|ref|ZP_05435621.1| tRNA-specific adenosine deaminase [Escherichia sp. 4_1_40B] gi|260856653|ref|YP_003230544.1| tRNA-specific adenosine deaminase [Escherichia coli O26:H11 str. 11368] gi|260869246|ref|YP_003235648.1| tRNA-specific adenosine deaminase [Escherichia coli O111:H- str. 11128] gi|297516926|ref|ZP_06935312.1| tRNA-specific adenosine deaminase [Escherichia coli OP50] gi|307139195|ref|ZP_07498551.1| tRNA-specific adenosine deaminase [Escherichia coli H736] gi|307313870|ref|ZP_07593486.1| CMP/dCMP deaminase zinc-binding [Escherichia coli W] gi|150421688|sp|P68398|TADA_ECOLI RecName: Full=tRNA-specific adenosine deaminase gi|150421691|sp|P68397|TADA_SHIFL RecName: Full=tRNA-specific adenosine deaminase gi|145693172|gb|AAC75612.2| tRNA-specific adenosine deaminase [Escherichia coli str. K-12 substr. MG1655] gi|169890004|gb|ACB03711.1| tRNA-specific adenosine deaminase [Escherichia coli str. K-12 substr. DH10B] gi|170520631|gb|ACB18809.1| tRNA-specific adenosine deaminase [Escherichia coli SMS-3-5] gi|190901985|gb|EDV61732.1| tRNA-specific adenosine deaminase [Escherichia coli B7A] gi|194423412|gb|EDX39403.1| tRNA-specific adenosine deaminase [Escherichia coli 101-1] gi|238863717|gb|ACR65715.1| tRNA-specific adenosine deaminase [Escherichia coli BW2952] gi|253323587|gb|ACT28189.1| CMP/dCMP deaminase zinc-binding [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|257755302|dbj|BAI26804.1| tRNA-specific adenosine deaminase [Escherichia coli O26:H11 str. 11368] gi|257765602|dbj|BAI37097.1| tRNA-specific adenosine deaminase [Escherichia coli O111:H- str. 11128] gi|260448361|gb|ACX38783.1| CMP/dCMP deaminase zinc-binding protein [Escherichia coli DH1] gi|306906371|gb|EFN36886.1| CMP/dCMP deaminase zinc-binding [Escherichia coli W] gi|313651052|gb|EFS15452.1| tRNA-specific adenosine deaminase [Shigella flexneri 2a str. 2457T] gi|313848716|emb|CAQ32934.2| tRNA-specific adenosine deaminase monomer, subunit of tRNA-specific adenosine deaminase [Escherichia coli BL21(DE3)] gi|315061878|gb|ADT76205.1| tRNA-specific adenosine deaminase [Escherichia coli W] gi|320186358|gb|EFW61092.1| tRNA-specific adenosine-34 deaminase [Shigella flexneri CDC 796-83] gi|320200123|gb|EFW74712.1| tRNA-specific adenosine-34 deaminase [Escherichia coli EC4100B] gi|323377541|gb|ADX49809.1| CMP/dCMP deaminase zinc-binding protein [Escherichia coli KO11] gi|323936299|gb|EGB32590.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia coli E1520] gi|323941178|gb|EGB37363.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia coli E482] gi|323944616|gb|EGB40684.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia coli H120] gi|323961174|gb|EGB56787.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia coli H489] gi|323971115|gb|EGB66362.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia coli TA007] gi|324113086|gb|EGC07062.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia fergusonii B253] gi|324118231|gb|EGC12127.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia coli E1167] gi|332092598|gb|EGI97670.1| tRNA-specific adenosine deaminase [Shigella boydii 3594-74] gi|332344434|gb|AEE57768.1| tRNA-specific adenosine deaminase [Escherichia coli UMNK88] gi|332756134|gb|EGJ86485.1| tRNA-specific adenosine deaminase [Shigella flexneri 2747-71] gi|332765914|gb|EGJ96125.1| tRNA-specific adenosine deaminase monomer [Shigella flexneri 2930-71] gi|333002351|gb|EGK21915.1| tRNA-specific adenosine deaminase [Shigella flexneri K-272] gi|333016173|gb|EGK35505.1| tRNA-specific adenosine deaminase [Shigella flexneri K-227] gi|333016472|gb|EGK35803.1| tRNA-specific adenosine deaminase [Shigella flexneri K-304] Length = 167 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 11 WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 71 QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI ++ DFF+ RR Sbjct: 131 EITEGILADECAALLSDFFRMRR 153 >gi|296875658|ref|ZP_06899727.1| possible cytosine deaminase [Streptococcus parasanguinis ATCC 15912] gi|322390383|ref|ZP_08063906.1| tRNA-specific adenosine deaminase [Streptococcus parasanguinis ATCC 903] gi|296433342|gb|EFH19120.1| possible cytosine deaminase [Streptococcus parasanguinis ATCC 15912] gi|321142924|gb|EFX38379.1| tRNA-specific adenosine deaminase [Streptococcus parasanguinis ATCC 903] Length = 180 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 60/146 (41%), Positives = 85/146 (58%), Gaps = 4/146 (2%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FM AL+EA+ A +EIP+G V V + +II R N EL+ HAEI+AI + Sbjct: 21 MFMREALKEAEIALANDEIPIGCVLVKDGQIIGRGHNAREELQRAVMHAEIMAIEEANQR 80 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CH 123 + L + L+VT+EPC MC+ AI LARI ++ YGA+N K GG G+ + LA + Sbjct: 81 ENSWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIYGATNQKFGGA--GSLYDILADERLN 138 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI E I+Q FF++ R Sbjct: 139 HRVEVETGILEAECAAIMQTFFRQGR 164 >gi|271501609|ref|YP_003334635.1| CMP/dCMP deaminase zinc-binding protein [Dickeya dadantii Ech586] gi|270345164|gb|ACZ77929.1| CMP/dCMP deaminase zinc-binding protein [Dickeya dadantii Ech586] Length = 170 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL AQ A E+PVGAV V +++I NR D TAHAEI+A++ G ++L Sbjct: 10 WMRHALSLAQRAWDEGEVPVGAVLVQGDRVIGEGWNRPIGRHDPTAHAEIMALQQGGQVL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LY+TLEPC MCA A+ +RI RL YGA++ K G + +H Sbjct: 70 QNYRLLDTTLYITLEPCVMCAGAMIHSRITRLVYGAADAKTGAAGSLVDILRHPGMNHQI 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I G+ Q +++ FF+ RR Sbjct: 130 AITDGVLAQECSELLSRFFRMRR 152 >gi|251772814|gb|EES53374.1| putative zinc-binding cytidine/deoxycytidylate deaminase [Leptospirillum ferrodiazotrophum] Length = 158 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 83/143 (58%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ AL A+N + +++PVGA+ V+ +I+ N+ R D TAHAEI+A+R L Sbjct: 15 FMNKALNLARNGIV-DDVPVGAIVVVGGEIVGEGVNQGRASHDPTAHAEIIALRRAAARL 73 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP LYVTLEPC MC A+ RI RL +GA +PK G + + H Sbjct: 74 ENYRLPLSTLYVTLEPCLMCLGAMMEGRIHRLVFGARDPKRGVAGSLYDLHNDPRFTHRI 133 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E+ SR++++ FF+++R Sbjct: 134 KVESGLCEEESRELLRQFFEKKR 156 >gi|306826204|ref|ZP_07459538.1| tRNA-specific adenosine deaminase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431480|gb|EFM34462.1| tRNA-specific adenosine deaminase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 155 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 79/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 VEEKEAFMREALREAEIALEHDEIPIGCVIVKDREIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 65 NANVSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 125 RLNHRVEVETGILEDDCAAIMQDFFRNRR 153 >gi|108758559|ref|YP_630178.1| cytidine and deoxycytidylate deaminase zinc-binding domain-containing protein [Myxococcus xanthus DK 1622] gi|108462439|gb|ABF87624.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein [Myxococcus xanthus DK 1622] Length = 154 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL A+ AA E+PVGAVAVLN +++ NR ++ AHAE+LA+ R + Sbjct: 6 FMQQALSLAREAAELGEVPVGAVAVLNGEVVGAGFNRREVDRNPLAHAEMLAMDAAARKI 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L V LYVTLEPC MCA + +R+ RL +GA +PK G + + +H Sbjct: 66 GAWRLSGVTLYVTLEPCAMCAGGLVQSRVTRLVFGAFDPKAGAVGSLYNLVEEPRHNHRL 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI SR +++ FF R Sbjct: 126 QVTSGILADESRLLLKTFFGRLR 148 >gi|261868753|ref|YP_003256675.1| tRNA-specific adenosine deaminase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261414085|gb|ACX83456.1| tRNA-specific adenosine deaminase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 175 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 60/144 (41%), Positives = 81/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL A A EIPVGAV V +II N + D TAHAEI+ +R G + Sbjct: 12 FMHHALMLAGKAEALGEIPVGAVLVSEAGEIIGEGWNLSIIHSDPTAHAEIVTLRQGGQK 71 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LYVTLEPCTMCA AI +RI+RL +GA++ K G + + F+ +H+ Sbjct: 72 LQNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGAADYKTGAVGSRFHFFDDYKMNHA 131 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 EI G+ +Q + + FF++RR Sbjct: 132 IEITGGVLQQECSEKLSAFFQKRR 155 >gi|227328190|ref|ZP_03832214.1| tRNA-specific adenosine deaminase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 158 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 61/142 (42%), Positives = 75/142 (52%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL AQ A E+PVGAV VL+N+ I NR D TAHAEI+A+R G ++L Sbjct: 1 MRYALTLAQRAQDEGEVPVGAVLVLDNEAIGEGWNRPIGHHDPTAHAEIMALRQGGQVLQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L E LYVTLEPC MCA A+ +RI RL YGAS+ K G + +H Sbjct: 61 NYRLLETTLYVTLEPCIMCAGAMIHSRIGRLVYGASDEKTGAAGSLVDILRHPGMNHQIV 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I GI + FF+ RR Sbjct: 121 IESGILADECSATLSAFFRLRR 142 >gi|170759519|ref|YP_001785356.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169406508|gb|ACA54919.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 145 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 59/145 (40%), Positives = 81/145 (55%), Gaps = 1/145 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N ++ A+ EA+ + E+PVGA+ V NKII+++ N LKD AHAEIL+I+ C Sbjct: 2 NDYIEYAIIEAKKSLAIGEVPVGAIIVKENKIIAKSHNLKETLKDPIAHAEILSIKKACN 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 IL L +YVTLEPC MCA+AI +RI LY G +P GG + A Sbjct: 62 ILGDWRLKGCKMYVTLEPCPMCASAIIQSRISELYIGTFDPVGGACGSAVNITNNAHLKS 121 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + I +++ SR II +FFK R Sbjct: 122 NLNIKWLYNDECSR-IITNFFKNIR 145 >gi|188588285|ref|YP_001922596.1| tRNA-specific adenosine deaminase [Clostridium botulinum E3 str. Alaska E43] gi|188498566|gb|ACD51702.1| tRNA-specific adenosine deaminase [Clostridium botulinum E3 str. Alaska E43] Length = 157 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 50/103 (48%), Positives = 65/103 (63%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A EEA+ A + E+P+GAV V +N +IS+A N LKD TAHAEILAIR + L Sbjct: 8 FLDIAKEEAKKAMSKGEVPIGAVIVKDNIVISKAHNLKETLKDATAHAEILAIREASKFL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 L ++YVTLEPCTMC +AI +RI +L+ G N G Sbjct: 68 DDWRLNGTEMYVTLEPCTMCTSAIIQSRISKLHIGTFNKDMGA 110 >gi|148653387|ref|YP_001280480.1| CMP/dCMP deaminase, zinc-binding [Psychrobacter sp. PRwf-1] gi|148572471|gb|ABQ94530.1| CMP/dCMP deaminase, zinc-binding [Psychrobacter sp. PRwf-1] Length = 190 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 58/144 (40%), Positives = 82/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL AQ A + E+PVGAV V +NKII N+ D TAHAE++A+R C+ L Sbjct: 37 FMRRALALAQQGASQEEVPVGAVLVCDNKIIGEGFNQPITTSDPTAHAEVVALRCACQTL 96 Query: 67 SQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 LP LYVTLEPCTMC A+ AR+ RL + P+ G + + + +H Sbjct: 97 QNYRLPPNTTLYVTLEPCTMCLGALIHARLARLVFATFEPRAGMVGSQLNLTEMDFYNHK 156 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + Y G+ +Q+S+ ++ FF+ RR Sbjct: 157 MQAYSGLLQQQSQTQLRSFFRARR 180 >gi|90410888|ref|ZP_01218902.1| Putative cytosine/adenosine deaminase [Photobacterium profundum 3TCK] gi|90328101|gb|EAS44412.1| Putative cytosine/adenosine deaminase [Photobacterium profundum 3TCK] Length = 175 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 80/144 (55%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++M A+E A A E+PVGAV V +++ NR+ D TAHAE++A+R ++ Sbjct: 16 LYMRRAIELASQAEAEGEVPVGAVVVYEGRVVGEGWNRSIGQHDATAHAEMMALRQAGKV 75 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L + LYVTLEPC MCA A+ +RI ++ +GAS+ K G + + +H Sbjct: 76 IQNYRLLDATLYVTLEPCPMCAGAMVHSRIGKVIFGASDLKTGAAGSVMNLLSYDEVNHH 135 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ R +Q FFK RR Sbjct: 136 VDCQAGVLDEECRAQLQAFFKRRR 159 >gi|317049171|ref|YP_004116819.1| CMP/dCMP deaminase zinc-binding protein [Pantoea sp. At-9b] gi|316950788|gb|ADU70263.1| CMP/dCMP deaminase zinc-binding protein [Pantoea sp. At-9b] Length = 165 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A + E+PVGAV V + +I NR D TAHAEI+A+R G ++L Sbjct: 9 WMRHALRLARLAWEQGEVPVGAVLVQGDTVIGEGWNRPIGQHDPTAHAEIMALRQGGKVL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI RL YGA + K G + +H Sbjct: 69 ENYRLLDTTLYVTLEPCVMCAGAMVHSRITRLVYGAKDEKTGAAGSLLDVIGHPGMNHQI 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ + ++ DFF+ RR Sbjct: 129 QIDSGVLAEECAAMLSDFFRMRR 151 >gi|259907686|ref|YP_002648042.1| tRNA-specific adenosine deaminase [Erwinia pyrifoliae Ep1/96] gi|224963308|emb|CAX54793.1| tRNA-specific adenosine deaminase [Erwinia pyrifoliae Ep1/96] gi|310764806|gb|ADP09756.1| tRNA-specific adenosine deaminase [Erwinia sp. Ejp617] Length = 166 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV VL+ + I NR D TAHAE++A+R G +++ Sbjct: 9 WMRHALRLARRAWDEGEVPVGAVLVLDGQAIGEGWNRPIGQHDPTAHAEMMALRQGGKVI 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ R+ RL YGA + K G + A +H Sbjct: 69 ENYRLLDTTLYVTLEPCVMCAGAMIHGRVGRLVYGARDAKTGAAGSLLDVLGHAGMNHHV 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ ++ DFF++RR Sbjct: 129 QVDCGVLRDECAAMLSDFFRQRR 151 >gi|320547592|ref|ZP_08041877.1| tRNA-specific adenosine deaminase [Streptococcus equinus ATCC 9812] gi|320447667|gb|EFW88425.1| tRNA-specific adenosine deaminase [Streptococcus equinus ATCC 9812] Length = 168 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EAQ + + EIP+G V V + +II R N E + HAEI+AI Sbjct: 12 FMREALKEAQKSLEKEEIPIGCVIVKDGEIIGRGHNAREEQQKAILHAEIMAINEANENE 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LARI ++ YGA+N K GG + T +H Sbjct: 72 GNWRLLDSMLFVTIEPCVMCSGAIGLARIPQVIYGAANQKFGGAGSLYDILTDIRLNHRV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI E I+QDFF++ R Sbjct: 132 EVETGILEAECAGIMQDFFRKNR 154 >gi|70732252|ref|YP_262008.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas fluorescens Pf-5] gi|68346551|gb|AAY94157.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas fluorescens Pf-5] Length = 162 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 53/127 (41%), Positives = 75/127 (59%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV VL+ ++I R N D +AHAE++AIR + +S LP LYVTLEP Sbjct: 34 EVPVGAVLVLDGQVIGRGYNCPISGSDPSAHAEMVAIREAAQAVSNYRLPGSTLYVTLEP 93 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C+MCA I +RI R+ YGA PK G +++ QF+T +H G+ + ++ Sbjct: 94 CSMCAGLIVHSRIARVVYGALEPKAGIVQSQGQFFTQGFLNHRVLYEGGVLAEECGTVLS 153 Query: 143 DFFKERR 149 +FFK RR Sbjct: 154 EFFKARR 160 >gi|315612142|ref|ZP_07887058.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis ATCC 49296] gi|315315805|gb|EFU63841.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis ATCC 49296] Length = 155 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 79/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 VEEKEAFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L+VT+EPC MC+ AI LARI ++ YGA N K G + T Sbjct: 65 NANVSEESWRLLNCTLFVTIEPCVMCSGAIGLARIPKVVYGAKNQKFGAAGSLYDILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 125 RLNHRVEVETGILEDDCVAIMQDFFRNRR 153 >gi|291085019|ref|ZP_06351792.2| tRNA-specific adenosine deaminase [Citrobacter youngae ATCC 29220] gi|291071670|gb|EFE09779.1| tRNA-specific adenosine deaminase [Citrobacter youngae ATCC 29220] Length = 154 Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 56/142 (39%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G +L Sbjct: 1 MRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGHHDPTAHAEIMALRQGGLVLQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H E Sbjct: 61 NYRLLDATLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ ++ DFF+ RR Sbjct: 121 VTEGVLRDECATLLSDFFRMRR 142 >gi|258620044|ref|ZP_05715084.1| zinc-binding domain protein [Vibrio mimicus VM573] gi|258587777|gb|EEW12486.1| zinc-binding domain protein [Vibrio mimicus VM573] Length = 178 Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR ++L Sbjct: 21 FMRRAIMLAAQAEEQGEVPVGAVLVRDGEIIAEGWNCSITHHDATAHAEIEVIRKAGKVL 80 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S L + LYVTLEPC MCA A+ +R++R+ YGA + K G + +H Sbjct: 81 SNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFNSQASYHYA 140 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R +Q FF+ RR Sbjct: 141 TVEKGLLEEECRAQLQAFFQRRR 163 >gi|253702219|ref|YP_003023408.1| CMP/dCMP deaminase zinc-binding [Geobacter sp. M21] gi|251777069|gb|ACT19650.1| CMP/dCMP deaminase zinc-binding protein [Geobacter sp. M21] Length = 166 Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 51/148 (34%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K + +M A+ +A+ A E+P+GAV V + +I+R N +D AHAE++AIR Sbjct: 3 KDDHYWMGQAIAQARRAEAIGEVPIGAVVVKDGVVIARGHNLRESKQDPAAHAEMIAIRK 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L+ L LYVTLEPCTMC A+ L+R+ R+ +G+ +PKGG + Sbjct: 63 AAKKLASWRLTGATLYVTLEPCTMCMGAVILSRLERVVFGSYDPKGGAAGSLYDLSDDKR 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +HS + PG+ + + ++ FF R Sbjct: 123 LNHSVILTPGVRGEETSSMLSGFFAGLR 150 >gi|262190740|ref|ZP_06048969.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae CT 5369-93] gi|262033384|gb|EEY51893.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae CT 5369-93] Length = 175 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR + L Sbjct: 13 FMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKAL 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ +H Sbjct: 73 SNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAAYHYA 132 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R +Q FF+ RR Sbjct: 133 TVEKGLLEEECRAQLQAFFQRRR 155 >gi|300717977|ref|YP_003742780.1| tRNA-specific adenosine deaminase [Erwinia billingiae Eb661] gi|299063813|emb|CAX60933.1| tRNA-specific adenosine deaminase [Erwinia billingiae Eb661] Length = 171 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V +K I NR D TAHAEI+A+R G ++L Sbjct: 10 WMRHALMLARRAWEEGEVPVGAVLVQGDKAIGEGWNRPIGHHDPTAHAEIMALRQGGKVL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ RI RL +GA + K G + A +H Sbjct: 70 ENYRLLDTTLYVTLEPCVMCAGAMVHGRIGRLVFGARDEKTGAAGSLIDVLGHAGMNHQV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + ++ DFF+ RR Sbjct: 130 KVEEGMLAEECAGMLSDFFRHRR 152 >gi|197264537|ref|ZP_03164611.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205356928|ref|ZP_02343159.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|197242792|gb|EDY25412.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205325427|gb|EDZ13266.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 172 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G +L Sbjct: 11 WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 71 QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ ++ DFF+ RR Sbjct: 131 EIIEGVLRDECATLLSDFFRMRR 153 >gi|194451068|ref|YP_002046630.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195874089|ref|ZP_02700525.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205357850|ref|ZP_02573795.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205359212|ref|ZP_02668290.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205360435|ref|ZP_02683354.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|213053109|ref|ZP_03345987.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425288|ref|ZP_03358038.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213586542|ref|ZP_03368368.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213650179|ref|ZP_03380232.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213857782|ref|ZP_03384753.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|150421689|sp|Q8XGY4|TADA_SALTI RecName: Full=tRNA-specific adenosine deaminase gi|150421690|sp|Q7CQ08|TADA_SALTY RecName: Full=tRNA-specific adenosine deaminase gi|194409372|gb|ACF69591.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195630767|gb|EDX49359.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205329109|gb|EDZ15873.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205337614|gb|EDZ24378.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205349365|gb|EDZ35996.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|312913557|dbj|BAJ37531.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321222726|gb|EFX47797.1| tRNA-specific adenosine-34 deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 172 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G +L Sbjct: 11 WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 71 QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ ++ DFF+ RR Sbjct: 131 EIIEGVLRDECATLLSDFFRMRR 153 >gi|322620458|gb|EFY17323.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625074|gb|EFY21903.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629482|gb|EFY26258.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322639849|gb|EFY36528.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644265|gb|EFY40809.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649957|gb|EFY46377.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322658212|gb|EFY54478.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|323200394|gb|EFZ85475.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201294|gb|EFZ86361.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208364|gb|EFZ93304.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323221772|gb|EGA06180.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323245221|gb|EGA29222.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248795|gb|EGA32722.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323259073|gb|EGA42721.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261995|gb|EGA45560.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267779|gb|EGA51260.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] Length = 172 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G +L Sbjct: 11 WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI +RI R+ +GA + K G + +H Sbjct: 71 QNYRLLDTTLYVTLEPCVMCAGAIVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ ++ DFF+ RR Sbjct: 131 DIIEGVLRDECATLLSDFFRMRR 153 >gi|311278508|ref|YP_003940739.1| CMP/dCMP deaminase zinc-binding protein [Enterobacter cloacae SCF1] gi|308747703|gb|ADO47455.1| CMP/dCMP deaminase zinc-binding protein [Enterobacter cloacae SCF1] Length = 165 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL AQ A E+PVGAV V N++I NR D TAHAEI+A+R G +L Sbjct: 11 WMRHALGLAQRAWDEGEVPVGAVLVYQNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 71 QNYRLIDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ ++ DFF+ RR Sbjct: 131 EVTEGVLAGECSAMLSDFFRARR 153 >gi|254225102|ref|ZP_04918716.1| zinc-binding domain protein [Vibrio cholerae V51] gi|125622489|gb|EAZ50809.1| zinc-binding domain protein [Vibrio cholerae V51] Length = 193 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR + L Sbjct: 31 FMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKAL 90 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ +H Sbjct: 91 SNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAAYHYA 150 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R +Q FF+ RR Sbjct: 151 TVEKGLLEEECRAQLQAFFQRRR 173 >gi|161612662|ref|YP_001586627.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161362026|gb|ABX65794.1| hypothetical protein SPAB_00358 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 172 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G +L Sbjct: 11 WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 71 QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ ++ DFF+ RR Sbjct: 131 EIIEGVLRDECATLLSDFFRMRR 153 >gi|213612302|ref|ZP_03370128.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 163 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G +L Sbjct: 2 WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 61 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 62 QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 121 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ ++ DFF+ RR Sbjct: 122 EIIEGVLRDECATLLSDFFRMRR 144 >gi|50843619|ref|YP_056846.1| putative cytidine and deoxycytidylate deaminase [Propionibacterium acnes KPA171202] gi|50841221|gb|AAT83888.1| putative cytidine and deoxycytidylate deaminase [Propionibacterium acnes KPA171202] gi|313765224|gb|EFS36588.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL013PA1] gi|313771619|gb|EFS37585.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL074PA1] gi|313794199|gb|EFS42219.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL110PA1] gi|313803320|gb|EFS44516.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL110PA2] gi|313808654|gb|EFS47114.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL087PA2] gi|313810633|gb|EFS48347.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL083PA1] gi|313817055|gb|EFS54769.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL059PA1] gi|313819106|gb|EFS56820.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL046PA2] gi|313821181|gb|EFS58895.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL036PA1] gi|313823858|gb|EFS61572.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL036PA2] gi|313829225|gb|EFS66939.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL063PA2] gi|313831470|gb|EFS69184.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL007PA1] gi|313834120|gb|EFS71834.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL056PA1] gi|313839149|gb|EFS76863.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL086PA1] gi|314916774|gb|EFS80605.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL005PA4] gi|314919085|gb|EFS82916.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL050PA1] gi|314921113|gb|EFS84944.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL050PA3] gi|314926198|gb|EFS90029.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL036PA3] gi|314931378|gb|EFS95209.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL067PA1] gi|314956234|gb|EFT00606.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL027PA1] gi|314958729|gb|EFT02831.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL002PA1] gi|314961035|gb|EFT05136.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL002PA2] gi|314963855|gb|EFT07955.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL082PA1] gi|314968860|gb|EFT12958.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL037PA1] gi|314974836|gb|EFT18931.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL053PA1] gi|314977837|gb|EFT21931.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL045PA1] gi|314979008|gb|EFT23102.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL072PA2] gi|314984517|gb|EFT28609.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL005PA1] gi|314985912|gb|EFT30004.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL005PA2] gi|314989321|gb|EFT33412.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL005PA3] gi|315078338|gb|EFT50377.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL053PA2] gi|315081352|gb|EFT53328.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL078PA1] gi|315085008|gb|EFT56984.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL027PA2] gi|315087538|gb|EFT59514.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL002PA3] gi|315089555|gb|EFT61531.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL072PA1] gi|315095685|gb|EFT67661.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL038PA1] gi|315099989|gb|EFT71965.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL059PA2] gi|315102851|gb|EFT74827.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL046PA1] gi|315106621|gb|EFT78597.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL030PA1] gi|315110552|gb|EFT82528.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL030PA2] gi|327325845|gb|EGE67636.1| tRNA-specific adenosine deaminase [Propionibacterium acnes HL096PA3] gi|327332941|gb|EGE74673.1| tRNA-specific adenosine deaminase [Propionibacterium acnes HL096PA2] gi|327448646|gb|EGE95300.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL043PA1] gi|327450305|gb|EGE96959.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL013PA2] gi|327451128|gb|EGE97782.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL043PA2] gi|327455462|gb|EGF02117.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL087PA3] gi|327455948|gb|EGF02603.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL092PA1] gi|327457603|gb|EGF04258.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL083PA2] gi|328756878|gb|EGF70494.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL087PA1] gi|328757762|gb|EGF71378.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL020PA1] gi|328759467|gb|EGF73083.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL025PA2] gi|328761913|gb|EGF75422.1| tRNA-specific adenosine deaminase [Propionibacterium acnes HL099PA1] gi|332676565|gb|AEE73381.1| tRNA-specific adenosine deaminase [Propionibacterium acnes 266] Length = 149 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL+ A+ AA ++P+GAV + N +++S AGN D TAHAE+LAIR Sbjct: 1 MTQALDVARRAATWGDVPIGAVILGANGEVLSEAGNERERTGDPTAHAEVLAIRRAAEAR 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPCTMCA I ARI R+ +GA +PK G + + H P Sbjct: 61 DGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDPKAGAVSSLFDAMRDPRLPHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + S ++++FF R Sbjct: 121 KVVTGVMAEESSALLREFFDGHR 143 >gi|262172118|ref|ZP_06039796.1| tRNA-specific adenosine-34 deaminase [Vibrio mimicus MB-451] gi|261893194|gb|EEY39180.1| tRNA-specific adenosine-34 deaminase [Vibrio mimicus MB-451] Length = 170 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR ++L Sbjct: 13 FMRRAIMLAAQAEEQGEVPVGAVLVRDGEIIAEGWNCSITHHDATAHAEIEVIRKAGKVL 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S L + LYVTLEPC MCA A+ +R++R+ YGA + K G + +H Sbjct: 73 SNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFNSQASYHYA 132 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R +Q FF+ RR Sbjct: 133 TVEKGLLEEECRAQLQAFFQRRR 155 >gi|229826609|ref|ZP_04452678.1| hypothetical protein GCWU000182_01985 [Abiotrophia defectiva ATCC 49176] gi|229789479|gb|EEP25593.1| hypothetical protein GCWU000182_01985 [Abiotrophia defectiva ATCC 49176] Length = 167 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 57/151 (37%), Positives = 83/151 (54%), Gaps = 4/151 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+++A+ A +E+P+G V VL+ KII+R NR AHAE++AI+ Sbjct: 1 MTTDEKWMKEAIKQAEKAKKLDEVPIGCVIVLDGKIIARGYNRRNTDHTSLAHAEMMAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ + L + LYVTLEPC MCA AI +R+ R+ GA N K G G+ F L Sbjct: 61 KACKKIRDWRLEKCTLYVTLEPCQMCAGAIVQSRVERVVIGAMNKKAGCA--GSIFNLLE 118 Query: 121 T--CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E +++ FFKE R Sbjct: 119 EDRFNHKAEVVRGVLENECSEMMSMFFKELR 149 >gi|15640880|ref|NP_230511.1| yfhC protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121585742|ref|ZP_01675537.1| zinc-binding domain protein [Vibrio cholerae 2740-80] gi|121728321|ref|ZP_01681351.1| zinc-binding domain protein [Vibrio cholerae V52] gi|147675155|ref|YP_001216345.1| zinc-binding domain-containing protein [Vibrio cholerae O395] gi|153802057|ref|ZP_01956643.1| zinc-binding domain protein [Vibrio cholerae MZO-3] gi|153819008|ref|ZP_01971675.1| zinc-binding domain protein [Vibrio cholerae NCTC 8457] gi|153823068|ref|ZP_01975735.1| zinc-binding domain protein [Vibrio cholerae B33] gi|227081040|ref|YP_002809591.1| yfhC protein [Vibrio cholerae M66-2] gi|229505525|ref|ZP_04395035.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae BX 330286] gi|229510804|ref|ZP_04400283.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae B33] gi|229517925|ref|ZP_04407369.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae RC9] gi|229608545|ref|YP_002879193.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae MJ-1236] gi|254848002|ref|ZP_05237352.1| zinc-binding domain-containing protein [Vibrio cholerae MO10] gi|298499008|ref|ZP_07008815.1| zinc-binding domain-containing protein [Vibrio cholerae MAK 757] gi|9655317|gb|AAF94026.1| yfhC protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121550105|gb|EAX60121.1| zinc-binding domain protein [Vibrio cholerae 2740-80] gi|121629376|gb|EAX61806.1| zinc-binding domain protein [Vibrio cholerae V52] gi|124122416|gb|EAY41159.1| zinc-binding domain protein [Vibrio cholerae MZO-3] gi|126510441|gb|EAZ73035.1| zinc-binding domain protein [Vibrio cholerae NCTC 8457] gi|126519394|gb|EAZ76617.1| zinc-binding domain protein [Vibrio cholerae B33] gi|146317038|gb|ABQ21577.1| zinc-binding domain protein [Vibrio cholerae O395] gi|227008928|gb|ACP05140.1| yfhC protein [Vibrio cholerae M66-2] gi|227012684|gb|ACP08894.1| yfhC protein [Vibrio cholerae O395] gi|229344640|gb|EEO09614.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae RC9] gi|229350769|gb|EEO15710.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae B33] gi|229357748|gb|EEO22665.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae BX 330286] gi|229371200|gb|ACQ61623.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae MJ-1236] gi|254843707|gb|EET22121.1| zinc-binding domain-containing protein [Vibrio cholerae MO10] gi|297543341|gb|EFH79391.1| zinc-binding domain-containing protein [Vibrio cholerae MAK 757] Length = 193 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR + L Sbjct: 31 FMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKAL 90 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ +H Sbjct: 91 SNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAAYHYA 150 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R +Q FF+ RR Sbjct: 151 TVEKGLLEEECRAQLQAFFQRRR 173 >gi|255744661|ref|ZP_05418612.1| tRNA-specific adenosine-34 deaminase [Vibrio cholera CIRS 101] gi|262161205|ref|ZP_06030316.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae INDRE 91/1] gi|262168710|ref|ZP_06036405.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae RC27] gi|255737692|gb|EET93086.1| tRNA-specific adenosine-34 deaminase [Vibrio cholera CIRS 101] gi|262022828|gb|EEY41534.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae RC27] gi|262028955|gb|EEY47608.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae INDRE 91/1] Length = 175 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR + L Sbjct: 13 FMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKAL 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ +H Sbjct: 73 SNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAAYHYA 132 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R +Q FF+ RR Sbjct: 133 TVEKGLLEEECRAQLQAFFQRRR 155 >gi|238762806|ref|ZP_04623775.1| tRNA-specific adenosine deaminase [Yersinia kristensenii ATCC 33638] gi|238699111|gb|EEP91859.1| tRNA-specific adenosine deaminase [Yersinia kristensenii ATCC 33638] Length = 194 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A A E+PVGA+ VL+N++I NR+ D TAHAEI+A+R G + + Sbjct: 33 WMQRALVLALRAQAEGEVPVGAILVLDNQVIGEGWNRSIGDNDPTAHAEIMALRQGGQAV 92 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + +H Sbjct: 93 QNYRLIDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLVDILRHPGMNHQI 152 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + FF+ RR Sbjct: 153 EITAGVLADACSHQLSAFFRLRR 175 >gi|228470550|ref|ZP_04055407.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas uenonis 60-3] gi|228307677|gb|EEK16653.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas uenonis 60-3] Length = 155 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 83/143 (58%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL++A A +E+P+GAV + +I++++ N+ L D TAHAE+LAI + Sbjct: 15 MMQLALQQALVAYEADEVPIGAVIAVGTRILAKSHNQVELLNDPTAHAEMLAITQATAAI 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + LP+ LYVT+EPC MC A+ +I R+ YGA++PKGG + Y+ H Sbjct: 75 GGKYLPQCTLYVTVEPCPMCMGALRWTQIGRIVYGAADPKGGYMR-----YSSTLPHPKS 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R+++ +F+ +R Sbjct: 130 VVMGGVCEEECRELMVSYFQRKR 152 >gi|194445660|ref|YP_002041831.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194404323|gb|ACF64545.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 172 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G +L Sbjct: 11 WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 71 QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ ++ DFF+ RR Sbjct: 131 EIIEGVLRDECATLLSDFFRMRR 153 >gi|322613338|gb|EFY10280.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322633869|gb|EFY30608.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635475|gb|EFY32186.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322654860|gb|EFY51177.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661716|gb|EFY57934.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669697|gb|EFY65843.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673296|gb|EFY69401.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322674915|gb|EFY71002.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682938|gb|EFY78956.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685599|gb|EFY81594.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323191973|gb|EFZ77211.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323211560|gb|EFZ96398.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215992|gb|EGA00724.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323225619|gb|EGA09846.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229337|gb|EGA13461.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235348|gb|EGA19432.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237466|gb|EGA21529.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323254025|gb|EGA37846.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323269662|gb|EGA53114.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 183 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G +L Sbjct: 22 WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI +RI R+ +GA + K G + +H Sbjct: 82 QNYRLLDTTLYVTLEPCVMCAGAIVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ ++ DFF+ RR Sbjct: 142 DIIEGVLRDECATLLSDFFRMRR 164 >gi|16761480|ref|NP_457097.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765888|ref|NP_461503.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29140823|ref|NP_804165.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62181133|ref|YP_217550.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224582890|ref|YP_002636688.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|25303877|pir||AF0827 conserved hypothetical protein STY2814 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|303325222|pdb|3OCQ|A Chain A, Crystal Structure Of Trna-Specific Adenosine Deaminase From Salmonella Enterica gi|16421115|gb|AAL21462.1| putative cytosine/adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503780|emb|CAD02770.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29136448|gb|AAO68014.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62128766|gb|AAX66469.1| putative Cytosine/adenosine deaminase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224467417|gb|ACN45247.1| hypothetical protein SPC_1081 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247763|emb|CBG25591.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994694|gb|ACY89579.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159116|emb|CBW18630.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|322715623|gb|EFZ07194.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130899|gb|ADX18329.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989495|gb|AEF08478.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 183 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G +L Sbjct: 22 WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 82 QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ ++ DFF+ RR Sbjct: 142 EIIEGVLRDECATLLSDFFRMRR 164 >gi|330968078|gb|EGH68338.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. actinidiae str. M302091] Length = 169 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 53/129 (41%), Positives = 74/129 (57%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 R E+PVGAV V N +II R N D +AHAE++AIR R L LP LYVTL Sbjct: 29 RGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRDAARALDNYRLPGSTLYVTL 88 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC+MCA I +R+ R+ YGA PK G +++ QF++ +H G+ + + Sbjct: 89 EPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRVLFEGGVLGEECGAM 148 Query: 141 IQDFFKERR 149 + +FF+ RR Sbjct: 149 LSEFFRMRR 157 >gi|311694940|gb|ADP97813.1| cytidine/deoxycytidylate deaminase family protein [marine bacterium HP15] Length = 167 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 61/141 (43%), Positives = 79/141 (56%), Gaps = 4/141 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ AL+ A AA + E+PVGAV VL+ K I N D TAHAEI A+R + Sbjct: 11 WMNRALQLAGEAAAKGEVPVGAVVVLDGKEIGAGFNAPISGCDPTAHAEIRALRDAAARV 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP+ LYVTLEPCTMC AI RI RL YGA PK G IE+ + TL H + Sbjct: 71 GNYRLPDATLYVTLEPCTMCVGAIVHGRISRLVYGAREPKAGAIESARR--TLEEPHLNW 128 Query: 127 EIYP--GISEQRSRQIIQDFF 145 ++ G+ + Q+I +FF Sbjct: 129 DVTAVGGVLSDQCSQVISEFF 149 >gi|156973452|ref|YP_001444359.1| hypothetical protein VIBHAR_01142 [Vibrio harveyi ATCC BAA-1116] gi|156525046|gb|ABU70132.1| hypothetical protein VIBHAR_01142 [Vibrio harveyi ATCC BAA-1116] Length = 164 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 55/142 (38%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+E A+ A E+PVGAV V + +II+ NR+ D TAHAEI +R L Sbjct: 1 MRRAMELAEQAEAEGEVPVGAVLVKDGEIIAEGWNRSICAHDATAHAEIQTLRKAGEALG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +R++R+ YGA + K G + +H Sbjct: 61 NYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVYGAPDLKAGAAGTVLNLFESQAAYHYAT 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R +Q FFK RR Sbjct: 121 VENGLLEEECRSQLQAFFKRRR 142 >gi|289426038|ref|ZP_06427785.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes SK187] gi|289427970|ref|ZP_06429674.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes J165] gi|295131701|ref|YP_003582364.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes SK137] gi|289153581|gb|EFD02295.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes SK187] gi|289158853|gb|EFD07053.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes J165] gi|291375889|gb|ADD99743.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes SK137] Length = 160 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL+ A+ AA ++P+GAV + N +++S AGN D TAHAE+LAIR Sbjct: 12 MTQALDVARRAATWGDVPIGAVILGANGEVLSEAGNERERTGDPTAHAEVLAIRRAAEAR 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPCTMCA I ARI R+ +GA +PK G + + H P Sbjct: 72 DGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDPKAGAVSSLFDAMRDPRLPHRP 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + S ++++FF R Sbjct: 132 KVVTGVMAEESSALLREFFDGHR 154 >gi|167855119|ref|ZP_02477891.1| hypothetical protein HPS_06809 [Haemophilus parasuis 29755] gi|167853754|gb|EDS24996.1| hypothetical protein HPS_06809 [Haemophilus parasuis 29755] Length = 157 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 63/143 (44%), Positives = 76/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A EIPVGAV V II NR L D TAHAEI AIRM + L Sbjct: 1 MQYALSLADKAEAEGEIPVGAVLVDKTGNIIGEGWNRAIILSDPTAHAEIQAIRMAGQQL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPCTMCA AI +RI RL +GAS+ K G + + + +H Sbjct: 61 QNYRLLDTTLYVTLEPCTMCAGAILHSRIGRLVFGASDYKTGALGSRFHLFEDYKMNHFL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ Q I FF++RR Sbjct: 121 QIRGGVMANECSQKISAFFRKRR 143 >gi|149196365|ref|ZP_01873420.1| Putative cytosine/adenosine deaminase [Lentisphaera araneosa HTCC2155] gi|149140626|gb|EDM29024.1| Putative cytosine/adenosine deaminase [Lentisphaera araneosa HTCC2155] Length = 174 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL +A+ A E+P+GAV V ++I++A N+ LKD TAHAEILA+ L Sbjct: 23 YMRMALRQAEQAFQAGEVPIGAVVVHEGEVIAKAWNQVEMLKDATAHAEILALTQASAHL 82 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVT EPC MCA A+ +RI R+ +G ++ KGGG + H Sbjct: 83 DRWRLHGCTLYVTKEPCPMCAGALVNSRIDRVVFGLADEKGGGCGGSFHIHDHDGLLHKV 142 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + E R +IQ FFK RR Sbjct: 143 KSEGHCCEDECRLLIQSFFKMRR 165 >gi|224101625|ref|XP_002312358.1| predicted protein [Populus trichocarpa] gi|222852178|gb|EEE89725.1| predicted protein [Populus trichocarpa] Length = 1364 Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 67/165 (40%), Positives = 84/165 (50%), Gaps = 17/165 (10%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +FM AL EA+ AA E+PVGAV V + +II+R N EL+D TAHAE++ IR Sbjct: 1161 KTDEMFMREALLEAKKAADSWEVPVGAVLVHHGRIIARGHNLVEELRDSTAHAEMICIRE 1220 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG------------G 109 L L E LY+TLEPC MCA AI ARI+ L +GA N G G Sbjct: 1221 ASNKLRTWRLSETTLYITLEPCPMCAGAILQARIKTLVWGAPNKLLGADGSWIRLFPDAG 1280 Query: 110 IENGTQFYTLATC-----HHSPEIYPGISEQRSRQIIQDFFKERR 149 ENG++ H I GI E ++Q FF+ RR Sbjct: 1281 EENGSELSNKPAAPVHPFHRKMTIRRGILESECADVMQQFFQLRR 1325 >gi|156932900|ref|YP_001436816.1| hypothetical protein ESA_00702 [Cronobacter sakazakii ATCC BAA-894] gi|156531154|gb|ABU75980.1| hypothetical protein ESA_00702 [Cronobacter sakazakii ATCC BAA-894] Length = 213 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL AQ A E+PVGAV V NN++I NR D TAHAEI+A+R G +L Sbjct: 51 WMRHALTLAQRAWDEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 110 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ RI L +GA + K G + + +H Sbjct: 111 QNYRLLDTTLYVTLEPCVMCAGAMVHGRIGTLVFGARDAKTGAVGSLMDITGHPGMNHQV 170 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI ++ FF++RR Sbjct: 171 QVIEGILATECSAMLSAFFRQRR 193 >gi|313886388|ref|ZP_07820111.1| cytidine and deoxycytidylate deaminase zinc-binding region [Porphyromonas asaccharolytica PR426713P-I] gi|332300169|ref|YP_004442090.1| CMP/dCMP deaminase zinc-binding protein [Porphyromonas asaccharolytica DSM 20707] gi|312924164|gb|EFR34950.1| cytidine and deoxycytidylate deaminase zinc-binding region [Porphyromonas asaccharolytica PR426713P-I] gi|332177232|gb|AEE12922.1| CMP/dCMP deaminase zinc-binding protein [Porphyromonas asaccharolytica DSM 20707] Length = 153 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 83/143 (58%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL++A A +E+P+GAV + +I++++ N+ L D TAHAE+LAI + Sbjct: 15 MMQLALQQALVAYEADEVPIGAVIAVGTRILAKSHNQVELLNDPTAHAEMLAITQATAAI 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + LP+ LYVT+EPC MC A+ +I R+ YG ++PKGG + Y+ A H Sbjct: 75 GGKYLPQCTLYVTVEPCPMCMGALRWTQIGRIVYGTADPKGGYMH-----YSDALPHPKS 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I G+ E+ R+++ +F+ +R Sbjct: 130 IIVGGVCEEECRELMVSYFRRKR 152 >gi|76799055|ref|ZP_00781248.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae 18RS21] gi|76585592|gb|EAO62157.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae 18RS21] Length = 168 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ AL+ A+++ + EIP+G V V + II R N E HAEI+AI + Sbjct: 12 FMTEALKXAKSSLEKEEIPIGCVIVKDGHIIGRGHNAREEFNKAILHAEIMAINNANEKV 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LARI + YGA N K G + + + +H Sbjct: 72 GNWRLLDTTLFVTVEPCVMCSGAIGLARIPHVIYGAKNTKFGAAGSLYDILSDSRLNHRV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI E + +I+QDFF++ R Sbjct: 132 EVETGILEDQCAKIMQDFFRKGR 154 >gi|153824574|ref|ZP_01977241.1| zinc-binding domain protein [Vibrio cholerae MZO-2] gi|149741792|gb|EDM55821.1| zinc-binding domain protein [Vibrio cholerae MZO-2] Length = 193 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR + L Sbjct: 31 FMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKAL 90 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ +H Sbjct: 91 SNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAAYHYA 150 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R +Q FF+ RR Sbjct: 151 TVEKGLLEEECRAQLQAFFQRRR 173 >gi|288929641|ref|ZP_06423485.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp. oral taxon 317 str. F0108] gi|288329146|gb|EFC67733.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp. oral taxon 317 str. F0108] Length = 144 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ M AL+EA+ A + E+P+GAV ++++RA N L DVTAHAE+ AI Sbjct: 1 MQVDEQMMRKALDEARQALAQGEVPIGAVIACKGRVVARAHNLTETLCDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L + LPE LYVT+EPC MCA A A++ R+ YG + K G + + Sbjct: 61 AAANMLGGKYLPECTLYVTVEPCPMCAGACGWAQLGRIVYGTRDEK-----RGYERFAPN 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E+ R++++ FF R Sbjct: 116 VLHAKATVTAGVLEEECRELMKSFFSGLR 144 >gi|290581189|ref|YP_003485581.1| putative deaminase [Streptococcus mutans NN2025] gi|254998088|dbj|BAH88689.1| putative deaminase [Streptococcus mutans NN2025] Length = 156 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EAQ + + EIP+G V V + +II N E HAEI+AI R Sbjct: 12 FMGEALKEAQLSLQKEEIPIGCVIVKDGQIIGCGHNAREEENLAIMHAEIMAINQANRTQ 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LARI ++ YGA N K GG + T +H Sbjct: 72 ESWRLLDCTLFVTIEPCIMCSGAIGLARIPQVIYGAKNAKFGGAGSLYDILTDERLNHRV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI E+ Q++Q FF+ RR Sbjct: 132 EVERGILEKECAQMMQSFFRYRR 154 >gi|307249782|ref|ZP_07531760.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858197|gb|EFM90275.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 196 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/140 (43%), Positives = 78/140 (55%), Gaps = 1/140 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALE A A + EIPVGAV V II N+ +L D +AHAE+LAIR ++ Sbjct: 43 FMQYALELADRAEVIGEIPVGAVLVDQEGNIIGEGWNQVIQLSDPSAHAEMLAIRQAGKV 102 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + LYVTLEPCTMCA AI +R+RRL +GAS+ K G I + + +H Sbjct: 103 QRNYRLLDCTLYVTLEPCTMCAGAILHSRLRRLVFGASDYKTGAIGSRFHLFEDYKMNHF 162 Query: 126 PEIYPGISEQRSRQIIQDFF 145 EI G+ + Q I FF Sbjct: 163 LEIRGGVLAEECSQKISRFF 182 >gi|159028687|emb|CAO88158.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 143 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A R ++PVGAV V +I++ N + D TAHAEILAIR ++L Sbjct: 1 MQLALNLAATAGDRGDVPVGAVIVDKQGHLIAQGANCKEKHHDPTAHAEILAIRAASQVL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA AI AR+ L YGA +PK G I F +H Sbjct: 61 GNWHLNGCTLYVTLEPCPMCAGAIIQARLGLLVYGADDPKTGVIRTVANFMDSPFSNHRL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI + S +++Q +F+++R Sbjct: 121 PVIAGILAKESGELLQTWFEKKR 143 >gi|119509443|ref|ZP_01628591.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nodularia spumigena CCY9414] gi|119465849|gb|EAW46738.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nodularia spumigena CCY9414] Length = 150 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 77/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 MS AL+ AQ A E+PVGAV + +I+ NR +D TAHAEI+A+R L Sbjct: 1 MSRALDLAQIAGDAGEVPVGAVIIDAGGNMIAEGENRKERDQDPTAHAEIIALRAAANSL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI AR+++L YG + K G I T A +H Sbjct: 61 HNWRLNQCTLYVTLEPCPMCAGAIVQARLQQLVYGVDDTKTGAIRTVTNIPDGAASNHRL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E RQ +Q +F RR Sbjct: 121 RVMGGVLESTCRQQLQTWFANRR 143 >gi|160871633|ref|ZP_02061765.1| tRNA-specific adenosine deaminase [Rickettsiella grylli] gi|159120432|gb|EDP45770.1| tRNA-specific adenosine deaminase [Rickettsiella grylli] Length = 160 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 53/148 (35%), Positives = 86/148 (58%), Gaps = 2/148 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL +A +A +E+P+GA+ V N+ +I+ A N+ D TAHAEI+ ++ Sbjct: 10 QRDTAYMQLALNQAAHAKRSHEVPIGAILVWNDHVIATAYNQTLTRCDPTAHAEIVVLQE 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L + LYVTLEPC MC A+ ARI+RL +GA + + G I + Q + L Sbjct: 70 TAKQLKNHRLLDATLYVTLEPCLMCVGAMIQARIKRLVFGAYDARLGTIMH--QLHRLKG 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +HS E+ G+ + + ++ FFK +R Sbjct: 128 LNHSFEVAEGVLSEACSKELKQFFKYKR 155 >gi|28897437|ref|NP_797042.1| YfhC protein [Vibrio parahaemolyticus RIMD 2210633] gi|28805649|dbj|BAC58926.1| YfhC protein [Vibrio parahaemolyticus RIMD 2210633] Length = 161 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 77/142 (54%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ A L E+PVGAV V + ++I+ NR+ D TAHAEI +R +L Sbjct: 1 MRRALALAEQAELEGEVPVGAVLVKDGEVIAEGWNRSICSHDATAHAEIQTLRNAGAVLE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +R++R+ +GA + K G + +H Sbjct: 61 NYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAAYHYAT 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ E R+ +Q FFK RR Sbjct: 121 VEKGLLEDECREQLQAFFKRRR 142 >gi|88858578|ref|ZP_01133220.1| hypothetical protein PTD2_14349 [Pseudoalteromonas tunicata D2] gi|88820195|gb|EAR30008.1| hypothetical protein PTD2_14349 [Pseudoalteromonas tunicata D2] Length = 165 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/149 (37%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK +M AL A A EIPVGA+ V ++II+ NR+ D +AHAE+LAIR Sbjct: 1 MKSDEYWMQQALLRADKAEAEGEIPVGAIVVYQDEIIAEGWNRSIISHDPSAHAEMLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + + LYVTLEPC MCA A+ +R++R+ YGA + K G +++ + Sbjct: 61 NAGIALQNYRMIDCTLYVTLEPCAMCAGALVHSRMKRVVYGADDLKTGAVKSVMNIVQHS 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ Q + FFK RR Sbjct: 121 QFNHQLEVTEGVLAQECGLRLSAFFKRRR 149 >gi|240145078|ref|ZP_04743679.1| tRNA-specific adenosine deaminase [Roseburia intestinalis L1-82] gi|257202749|gb|EEV01034.1| tRNA-specific adenosine deaminase [Roseburia intestinalis L1-82] gi|291537828|emb|CBL10939.1| Cytosine/adenosine deaminases [Roseburia intestinalis XB6B4] Length = 154 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ +A+ A +E+P+G V V N+KII+R NR + AHAE+ AIR Sbjct: 1 MNQDEKYMKAAIRQAKKAYALDEVPIGCVIVQNDKIIARGYNRRNTEGNTLAHAELTAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + +YVTLEPC MCA AI +R++++ G+ NPK G + + Sbjct: 61 KASKKTGDWRLEDCTMYVTLEPCQMCAGAIVQSRMKKVVIGSMNPKAGCAGSVLNLLQMQ 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + ++ FFKE R Sbjct: 121 QFNHQVEIEKGVLGEECSAMLSTFFKELR 149 >gi|163814785|ref|ZP_02206174.1| hypothetical protein COPEUT_00936 [Coprococcus eutactus ATCC 27759] gi|158450420|gb|EDP27415.1| hypothetical protein COPEUT_00936 [Coprococcus eutactus ATCC 27759] Length = 181 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL +A+ A ++P+G V V KII+R N+ K AHAEILAI + L Sbjct: 32 YMDKALAQARRAYANGDVPIGCVIVHEGKIIARGFNKRNLKKTTLAHAEILAIEQASKKL 91 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E +YVTLEPC MCA AI ARI ++ G NPK G + + +H Sbjct: 92 GDWRLEECTMYVTLEPCQMCAGAIVQARIPKVVIGCMNPKAGCAGSIINLLQMQQFNHQV 151 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ EQ ++++FFK+ R Sbjct: 152 DVIRGVREQECSGMMKEFFKDLR 174 >gi|90416322|ref|ZP_01224254.1| cytidine/deoxycytidylate deaminase family protein [marine gamma proteobacterium HTCC2207] gi|90332047|gb|EAS47261.1| cytidine/deoxycytidylate deaminase family protein [marine gamma proteobacterium HTCC2207] Length = 160 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E A AA E+PVGA+ V ++I N+ D T HAEI+A+R + L Sbjct: 7 FMGRAMELAHQAAAVGEVPVGALVVKEGRVIGEGYNQPITSCDPTGHAEIIAMRNAAQTL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L DLYVT+EPCTMC A+ ARI ++ +GA P+ G +E+ + + +HS Sbjct: 67 GNYRLSGCDLYVTIEPCTMCVGAMVHARIGKIVFGAKEPRAGALESQLRLMDESHYNHSI 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E G+ ++ I+ FF+ +R Sbjct: 127 EWQGGVLAEQCGAIMSGFFRAKR 149 >gi|24378807|ref|NP_720762.1| putative deaminase [Streptococcus mutans UA159] gi|24376681|gb|AAN58068.1|AE014879_5 putative deaminase [Streptococcus mutans UA159] Length = 156 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EAQ + + EIP+G V V + +II N E HAEI+AI R Sbjct: 12 FMGEALKEAQLSLQKEEIPIGCVIVKDGQIIGCGHNAREEENLAIMHAEIMAINQANRTQ 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LARI ++ YGA N K GG + T +H Sbjct: 72 ESWRLLDCTLFVTIEPCIMCSGAIGLARIPQVIYGAKNAKFGGAGSLYDILTDERLNHRV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI E+ Q++Q FF+ RR Sbjct: 132 EVERGILEKECAQMMQSFFRYRR 154 >gi|281179608|dbj|BAI55938.1| putative deaminase [Escherichia coli SE15] Length = 178 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 22 WMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 82 QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI ++ DFF+ RR Sbjct: 142 EITEGILADECAALLSDFFRMRR 164 >gi|218440469|ref|YP_002378798.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424] gi|218173197|gb|ACK71930.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424] Length = 162 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +MS A+ AQ AA ++PVGAV + K+I+ NR +D TAHAEI+ +R ++ Sbjct: 19 WMSRAITLAQEAAQAGDVPVGAVIIDEKGKLIAEGSNRKERDQDPTAHAEIIVLRRASQV 78 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + LYVTLEPC MC AI ARI L YG +PK G I +H Sbjct: 79 LQTWHLQQCKLYVTLEPCPMCTGAIIQARIALLIYGVDDPKTGTIRTVANLPDSPCSNHR 138 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI E R +Q +F ++R Sbjct: 139 LSVISGIMESACRHQLQTWFAQKR 162 >gi|168757783|ref|ZP_02782790.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4401] gi|168768660|ref|ZP_02793667.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4486] gi|188024727|ref|ZP_02773396.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4113] gi|189403941|ref|ZP_02786184.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4501] gi|195936706|ref|ZP_03082088.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4024] gi|208806459|ref|ZP_03248796.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4206] gi|208812941|ref|ZP_03254270.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4045] gi|208820370|ref|ZP_03260690.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4042] gi|209400171|ref|YP_002272033.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4115] gi|215487903|ref|YP_002330334.1| tRNA-specific adenosine deaminase [Escherichia coli O127:H6 str. E2348/69] gi|217327122|ref|ZP_03443205.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. TW14588] gi|254794508|ref|YP_003079345.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. TW14359] gi|261223005|ref|ZP_05937286.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. FRIK2000] gi|261259444|ref|ZP_05951977.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. FRIK966] gi|306814377|ref|ZP_07448539.1| tRNA-specific adenosine deaminase [Escherichia coli NC101] gi|150421686|sp|Q8XA44|TADA_ECO57 RecName: Full=tRNA-specific adenosine deaminase gi|150421687|sp|Q8FF24|TADA_ECOL6 RecName: Full=tRNA-specific adenosine deaminase gi|188017152|gb|EDU55274.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4113] gi|189355294|gb|EDU73713.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4401] gi|189362211|gb|EDU80630.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4486] gi|189368357|gb|EDU86773.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4501] gi|208726260|gb|EDZ75861.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4206] gi|208734218|gb|EDZ82905.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4045] gi|208740493|gb|EDZ88175.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4042] gi|209161571|gb|ACI39004.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4115] gi|215265975|emb|CAS10384.1| tRNA-specific adenosine deaminase [Escherichia coli O127:H6 str. E2348/69] gi|217319489|gb|EEC27914.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. TW14588] gi|254593908|gb|ACT73269.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. TW14359] gi|305851771|gb|EFM52223.1| tRNA-specific adenosine deaminase [Escherichia coli NC101] gi|312947130|gb|ADR27957.1| tRNA-specific adenosine deaminase [Escherichia coli O83:H1 str. NRG 857C] gi|320180559|gb|EFW55490.1| tRNA-specific adenosine-34 deaminase [Shigella boydii ATCC 9905] gi|320188900|gb|EFW63559.1| tRNA-specific adenosine-34 deaminase [Escherichia coli O157:H7 str. EC1212] gi|320640908|gb|EFX10396.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. G5101] gi|320646350|gb|EFX15277.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H- str. 493-89] gi|320651530|gb|EFX19917.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H- str. H 2687] gi|320657241|gb|EFX25050.1| tRNA-specific adenosine deaminase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662847|gb|EFX30179.1| tRNA-specific adenosine deaminase [Escherichia coli O55:H7 str. USDA 5905] gi|320667651|gb|EFX34566.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. LSU-61] gi|323955795|gb|EGB51553.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia coli H263] gi|323968007|gb|EGB63419.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia coli M863] gi|326340365|gb|EGD64169.1| tRNA-specific adenosine-34 deaminase [Escherichia coli O157:H7 str. 1125] gi|332088011|gb|EGI93136.1| tRNA-specific adenosine deaminase [Shigella boydii 5216-82] gi|332089781|gb|EGI94882.1| tRNA-specific adenosine deaminase [Shigella dysenteriae 155-74] Length = 167 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 11 WMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 71 QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI ++ DFF+ RR Sbjct: 131 EITEGILADECAALLSDFFRMRR 153 >gi|282600107|ref|ZP_05973017.2| tRNA-specific adenosine deaminase [Providencia rustigianii DSM 4541] gi|282566416|gb|EFB71951.1| tRNA-specific adenosine deaminase [Providencia rustigianii DSM 4541] Length = 176 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ A+E A+ A EIPVGA+ V +N++I+ N + E D TAHAEI+ ++ +IL Sbjct: 19 WMAQAIELAKQAQDIGEIPVGALLVKDNQLIATGWNHSIEQHDPTAHAEIITLQQAGKIL 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ YGA + K G + A +H Sbjct: 79 KNYRLLDTTLYVTLEPCIMCAGAMIHSRIGRVVYGAKDFKTGACGSFINIMGQAGLNHYV 138 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI E ++ FFK RR Sbjct: 139 DVTGGILEDVCSSMLSAFFKMRR 161 >gi|218701072|ref|YP_002408701.1| tRNA-specific adenosine deaminase [Escherichia coli IAI39] gi|218371058|emb|CAR18885.1| tRNA-specific adenosine deaminase [Escherichia coli IAI39] Length = 178 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 22 WMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 82 QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI ++ DFF+ RR Sbjct: 142 EIIEGILADECAALLSDFFRMRR 164 >gi|15803084|ref|NP_289115.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 EDL933] gi|15832679|ref|NP_311452.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. Sakai] gi|82777934|ref|YP_404283.1| tRNA-specific adenosine deaminase [Shigella dysenteriae Sd197] gi|91211884|ref|YP_541870.1| tRNA-specific adenosine deaminase [Escherichia coli UTI89] gi|110642721|ref|YP_670451.1| tRNA-specific adenosine deaminase [Escherichia coli 536] gi|117624781|ref|YP_853694.1| tRNA-specific adenosine deaminase [Escherichia coli APEC O1] gi|187775816|ref|ZP_02798525.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4196] gi|189009982|ref|ZP_02803540.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4076] gi|189405037|ref|ZP_02812923.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC869] gi|189405736|ref|ZP_02823945.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC508] gi|191172647|ref|ZP_03034186.1| tRNA-specific adenosine deaminase [Escherichia coli F11] gi|194432153|ref|ZP_03064442.1| tRNA-specific adenosine deaminase [Shigella dysenteriae 1012] gi|218559479|ref|YP_002392392.1| tRNA-specific adenosine deaminase [Escherichia coli S88] gi|218690674|ref|YP_002398886.1| tRNA-specific adenosine deaminase [Escherichia coli ED1a] gi|237705067|ref|ZP_04535548.1| tRNA-specific adenosine deaminase [Escherichia sp. 3_2_53FAA] gi|291283784|ref|YP_003500602.1| tRNA-specific adenosine deaminase [Escherichia coli O55:H7 str. CB9615] gi|293415828|ref|ZP_06658471.1| tRNA-specific adenosine deaminase [Escherichia coli B185] gi|300935691|ref|ZP_07150661.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 21-1] gi|300974171|ref|ZP_07172489.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 200-1] gi|309784689|ref|ZP_07679322.1| tRNA-specific adenosine deaminase [Shigella dysenteriae 1617] gi|331648252|ref|ZP_08349342.1| tRNA-specific adenosine deaminase [Escherichia coli M605] gi|331653994|ref|ZP_08354995.1| tRNA-specific adenosine deaminase [Escherichia coli M718] gi|331658703|ref|ZP_08359647.1| tRNA-specific adenosine deaminase [Escherichia coli TA206] gi|12516972|gb|AAG57673.1|AE005486_4 putative deaminase [Escherichia coli O157:H7 str. EDL933] gi|13362896|dbj|BAB36848.1| putative deaminase [Escherichia coli O157:H7 str. Sakai] gi|81242082|gb|ABB62792.1| putative deaminase [Shigella dysenteriae Sd197] gi|91073458|gb|ABE08339.1| putative deaminase [Escherichia coli UTI89] gi|110344313|gb|ABG70550.1| hypothetical protein YfhC [Escherichia coli 536] gi|115513905|gb|ABJ01980.1| tRNA-specific adenosine deaminase [Escherichia coli APEC O1] gi|187770595|gb|EDU34439.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4196] gi|189003519|gb|EDU72505.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4076] gi|189372298|gb|EDU90714.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC869] gi|189378592|gb|EDU97008.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC508] gi|190907120|gb|EDV66720.1| tRNA-specific adenosine deaminase [Escherichia coli F11] gi|194419682|gb|EDX35762.1| tRNA-specific adenosine deaminase [Shigella dysenteriae 1012] gi|209762958|gb|ACI79791.1| putative deaminase [Escherichia coli] gi|209762960|gb|ACI79792.1| putative deaminase [Escherichia coli] gi|209762962|gb|ACI79793.1| putative deaminase [Escherichia coli] gi|209762964|gb|ACI79794.1| putative deaminase [Escherichia coli] gi|209762966|gb|ACI79795.1| putative deaminase [Escherichia coli] gi|218366248|emb|CAR03995.1| tRNA-specific adenosine deaminase [Escherichia coli S88] gi|218428238|emb|CAR09014.1| tRNA-specific adenosine deaminase [Escherichia coli ED1a] gi|222034264|emb|CAP77005.1| tRNA-specific adenosine deaminase [Escherichia coli LF82] gi|226901433|gb|EEH87692.1| tRNA-specific adenosine deaminase [Escherichia sp. 3_2_53FAA] gi|290763657|gb|ADD57618.1| tRNA-specific adenosine deaminase [Escherichia coli O55:H7 str. CB9615] gi|291433476|gb|EFF06455.1| tRNA-specific adenosine deaminase [Escherichia coli B185] gi|294489520|gb|ADE88276.1| tRNA-specific adenosine deaminase [Escherichia coli IHE3034] gi|300308910|gb|EFJ63430.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 200-1] gi|300459125|gb|EFK22618.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 21-1] gi|307625893|gb|ADN70197.1| tRNA-specific adenosine deaminase [Escherichia coli UM146] gi|308927059|gb|EFP72533.1| tRNA-specific adenosine deaminase [Shigella dysenteriae 1617] gi|315288035|gb|EFU47437.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 110-3] gi|315300515|gb|EFU59744.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 16-3] gi|323188326|gb|EFZ73618.1| tRNA-specific adenosine deaminase [Escherichia coli RN587/1] gi|323949213|gb|EGB45104.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia coli H252] gi|324013577|gb|EGB82796.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 60-1] gi|326345048|gb|EGD68792.1| tRNA-specific adenosine-34 deaminase [Escherichia coli O157:H7 str. 1044] gi|327252269|gb|EGE63941.1| tRNA-specific adenosine deaminase [Escherichia coli STEC_7v] gi|330912330|gb|EGH40840.1| tRNA-specific adenosine-34 deaminase [Escherichia coli AA86] gi|331043112|gb|EGI15252.1| tRNA-specific adenosine deaminase [Escherichia coli M605] gi|331048843|gb|EGI20919.1| tRNA-specific adenosine deaminase [Escherichia coli M718] gi|331054368|gb|EGI26395.1| tRNA-specific adenosine deaminase [Escherichia coli TA206] Length = 178 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 22 WMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 82 QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI ++ DFF+ RR Sbjct: 142 EITEGILADECAALLSDFFRMRR 164 >gi|221233170|ref|YP_002515606.1| tRNA-specific adenosine deaminase [Caulobacter crescentus NA1000] gi|220962342|gb|ACL93698.1| tRNA-specific adenosine deaminase [Caulobacter crescentus NA1000] Length = 148 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/130 (43%), Positives = 77/130 (59%), Gaps = 2/130 (1%) Query: 22 NEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 E PVGAV + ++I+ AGN D TAHAEI A+R L L ++ L VT Sbjct: 15 GETPVGAVILDPSTGEVIATAGNGPIAAHDPTAHAEIAAMRAAAAKLGNYRLTDLTLVVT 74 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA AIS ARI R+ +GA +PKGG + +G +F+ TCH PE+ G+ S Sbjct: 75 LEPCAMCAGAISHARIGRVVFGADDPKGGAVVHGPKFFAQPTCHWRPEVTGGVLADESAD 134 Query: 140 IIQDFFKERR 149 +++ FF+ RR Sbjct: 135 LLRGFFRARR 144 >gi|218706062|ref|YP_002413581.1| tRNA -specific adenosine deaminase [Escherichia coli UMN026] gi|293406001|ref|ZP_06649993.1| tRNA-specific adenosine deaminase [Escherichia coli FVEC1412] gi|298381801|ref|ZP_06991400.1| tRNA-specific adenosine deaminase [Escherichia coli FVEC1302] gi|300898326|ref|ZP_07116674.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 198-1] gi|218433159|emb|CAR14055.1| tRNA-specific adenosine deaminase [Escherichia coli UMN026] gi|284922509|emb|CBG35596.1| tRNA-specific adenosine deaminase [Escherichia coli 042] gi|291428209|gb|EFF01236.1| tRNA-specific adenosine deaminase [Escherichia coli FVEC1412] gi|298279243|gb|EFI20757.1| tRNA-specific adenosine deaminase [Escherichia coli FVEC1302] gi|300357988|gb|EFJ73858.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 198-1] Length = 178 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 22 WMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 82 QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI ++ DFF+ RR Sbjct: 142 EITEGILADECAALLSDFFRMRR 164 >gi|297616226|ref|YP_003701385.1| CMP/dCMP deaminase zinc-binding protein [Syntrophothermus lipocalidus DSM 12680] gi|297144063|gb|ADI00820.1| CMP/dCMP deaminase zinc-binding protein [Syntrophothermus lipocalidus DSM 12680] Length = 155 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E A + E+PVGAV V N +IIS A N + +D TAHAE+LAI+ + L Sbjct: 10 FMRRAVELGWAAFHQGEVPVGAVVVKNGEIISSAHNEKEKRQDATAHAEMLAIQRASQAL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LY T+EPC MCA AI ARI+++ +GA + K G + +H Sbjct: 70 GTWRLQDTTLYSTIEPCPMCAGAIVQARIKKVVFGARDLKAGAGGSLINVLDFPGLNHRV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E +++ +FF+ R Sbjct: 130 EVIEGVLEDECTELMTEFFRRLR 152 >gi|213157131|ref|YP_002319176.1| tRNA-specific adenosine deaminase [Acinetobacter baumannii AB0057] gi|215483589|ref|YP_002325810.1| tRNA-specific adenosine deaminase [Acinetobacter baumannii AB307-0294] gi|239502187|ref|ZP_04661497.1| putative deaminase [Acinetobacter baumannii AB900] gi|301345934|ref|ZP_07226675.1| putative deaminase [Acinetobacter baumannii AB056] gi|213056291|gb|ACJ41193.1| tRNA-specific adenosine deaminase [Acinetobacter baumannii AB0057] gi|213987060|gb|ACJ57359.1| tRNA-specific adenosine deaminase [Acinetobacter baumannii AB307-0294] Length = 158 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/139 (42%), Positives = 74/139 (53%), Gaps = 1/139 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A E+A+ AA + EIPVGAV V NK+I N L D TAHAEI AIR C L Sbjct: 1 MQLAYEQAELAAKQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESLK 60 Query: 68 QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LPE LYVTLEPCTMC A+ ARI+ + +G + PK G + + Q +H Sbjct: 61 NYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGYYNHKF 120 Query: 127 EIYPGISEQRSRQIIQDFF 145 G ++ Q + FF Sbjct: 121 TFEHGCLHEKCAQQLSLFF 139 >gi|313902768|ref|ZP_07836165.1| tRNA-adenosine deaminase [Thermaerobacter subterraneus DSM 13965] gi|313466888|gb|EFR62405.1| tRNA-adenosine deaminase [Thermaerobacter subterraneus DSM 13965] Length = 200 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/128 (43%), Positives = 70/128 (54%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAVAV + II+R N L D TAHAEIL +R L L V LYVTLE Sbjct: 46 GEVPVGAVAVYQDAIIARGHNLRERLGDPTAHAEILVLREAAARLGGWRLEGVTLYVTLE 105 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI LAR+ RL YGA +PK G + +H E+ G+ S ++ Sbjct: 106 PCPMCAGAIVLARVPRLVYGARDPKAGAAGSLMNLVQHDRLNHRVELRSGVLADASAALL 165 Query: 142 QDFFKERR 149 + FF+ R Sbjct: 166 RGFFRRLR 173 >gi|237748635|ref|ZP_04579115.1| tRNA-specific adenosine deaminase [Oxalobacter formigenes OXCC13] gi|229379997|gb|EEO30088.1| tRNA-specific adenosine deaminase [Oxalobacter formigenes OXCC13] Length = 171 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 82/144 (56%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FM AL +A A E+PVGAV VL+ +II+R N+ D TAHAEI+A+R R Sbjct: 5 IFMREALAQAALAEEAGEVPVGAVVVLDGQIIARGFNQPITAHDPTAHAEIVALRNAARF 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 LP+ +LYVTLEPC+MC A+ AR++R+ +GA P+ G + + +H Sbjct: 65 CGNYRLPDCELYVTLEPCSMCVGAMIHARLKRVIFGAKEPRTGACGSIIDLFAQNELNHH 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G+ E S +++ FF RR Sbjct: 125 TTVTGGVLENESSVLLKTFFAGRR 148 >gi|26248923|ref|NP_754963.1| tRNA-specific adenosine deaminase [Escherichia coli CFT073] gi|227887593|ref|ZP_04005398.1| tRNA-specific adenosine deaminase [Escherichia coli 83972] gi|300982262|ref|ZP_07175973.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 45-1] gi|301047197|ref|ZP_07194289.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 185-1] gi|312965474|ref|ZP_07779706.1| tRNA-specific adenosine deaminase [Escherichia coli 2362-75] gi|26109329|gb|AAN81531.1|AE016764_213 Hypothetical protein yfhC [Escherichia coli CFT073] gi|227835943|gb|EEJ46409.1| tRNA-specific adenosine deaminase [Escherichia coli 83972] gi|300300874|gb|EFJ57259.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 185-1] gi|300408816|gb|EFJ92354.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 45-1] gi|307554578|gb|ADN47353.1| tRNA-specific adenosine deaminase [Escherichia coli ABU 83972] gi|312289894|gb|EFR17782.1| tRNA-specific adenosine deaminase [Escherichia coli 2362-75] gi|315292466|gb|EFU51818.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 153-1] gi|324008467|gb|EGB77686.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 57-2] Length = 178 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 22 WMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 82 QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI ++ DFF+ RR Sbjct: 142 EITEGILADECAALLSDFFRMRR 164 >gi|295687633|ref|YP_003591326.1| CMP/dCMP deaminase zinc-binding protein [Caulobacter segnis ATCC 21756] gi|295429536|gb|ADG08708.1| CMP/dCMP deaminase zinc-binding protein [Caulobacter segnis ATCC 21756] Length = 148 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 4/131 (3%) Query: 22 NEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78 E PVGAV +L+ K +++ AGN D TAHAEI A+R L L ++ L V Sbjct: 15 GETPVGAV-ILDPKTGEVLAVAGNGPIAAHDPTAHAEIAAMRAAAAKLENYRLTDLTLVV 73 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 TLEPC MCA AIS ARI R+ +GA +PKGG + +G +F+ TCH PE+ G+ + S Sbjct: 74 TLEPCAMCAGAISHARIGRVVFGAEDPKGGAVVHGPKFFAQPTCHWRPEVTGGVLAEESA 133 Query: 139 QIIQDFFKERR 149 ++++ FF+ RR Sbjct: 134 ELLRGFFRARR 144 >gi|218247490|ref|YP_002372861.1| CMP/dCMP deaminase [Cyanothece sp. PCC 8801] gi|257061174|ref|YP_003139062.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8802] gi|218167968|gb|ACK66705.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8801] gi|256591340|gb|ACV02227.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8802] Length = 154 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 78/144 (54%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL +A+ A E+PVGA+ V + +++ GNR +D TAHAE+LAIR + Sbjct: 10 WMEKALNQAKLAGEIGEVPVGAIIVDHQGNLLAETGNRKETNQDPTAHAEMLAIRQASQR 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LYVTLEPC MC A+ +R+ L YG PK G I A +H Sbjct: 70 LQTWHLNNCTLYVTLEPCPMCTGALIQSRLGLLVYGCDEPKSGTIRTVMNLPDSACSNHR 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI E+ RQ +Q +F+ERR Sbjct: 130 LAVISGILEEECRQQLQQWFRERR 153 >gi|325207969|gb|ADZ03421.1| putative tRNA-specific adenosine deaminase [Neisseria meningitidis NZ-05/33] Length = 148 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+A+ +AL EIPVGAV V + KII+ A N +V+ HAEI A+ + Sbjct: 4 FMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 64 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 124 AIRGGILQEECRAVLSRFFQNKR 146 >gi|269962366|ref|ZP_06176716.1| zinc-binding domain protein [Vibrio harveyi 1DA3] gi|269832862|gb|EEZ86971.1| zinc-binding domain protein [Vibrio harveyi 1DA3] Length = 164 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 75/142 (52%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+E A+ A E+PVGAV V + +I++ NR+ D TAHAEI +R L Sbjct: 1 MRRAMELAEQAEAEGEVPVGAVLVKDGEIVAEGWNRSICAHDATAHAEIQTLRKAGEALE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +R++R+ YGA + K G + +H Sbjct: 61 NYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVYGAPDLKAGAAGTVLNLFKSQAAYHYAT 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ E R +Q FFK RR Sbjct: 121 VESGLLEDECRSQLQAFFKRRR 142 >gi|16124486|ref|NP_419050.1| cytidine and deoxycytidylate deaminase family protein [Caulobacter crescentus CB15] gi|13421360|gb|AAK22218.1| cytidine and deoxycytidylate deaminase family protein [Caulobacter crescentus CB15] Length = 161 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/130 (43%), Positives = 77/130 (59%), Gaps = 2/130 (1%) Query: 22 NEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 E PVGAV + ++I+ AGN D TAHAEI A+R L L ++ L VT Sbjct: 28 GETPVGAVILDPSTGEVIATAGNGPIAAHDPTAHAEIAAMRAAAAKLGNYRLTDLTLVVT 87 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA AIS ARI R+ +GA +PKGG + +G +F+ TCH PE+ G+ S Sbjct: 88 LEPCAMCAGAISHARIGRVVFGADDPKGGAVVHGPKFFAQPTCHWRPEVTGGVLADESAD 147 Query: 140 IIQDFFKERR 149 +++ FF+ RR Sbjct: 148 LLRGFFRARR 157 >gi|260589044|ref|ZP_05854957.1| tRNA-specific adenosine deaminase [Blautia hansenii DSM 20583] gi|331083249|ref|ZP_08332362.1| hypothetical protein HMPREF0992_01286 [Lachnospiraceae bacterium 6_1_63FAA] gi|260540823|gb|EEX21392.1| tRNA-specific adenosine deaminase [Blautia hansenii DSM 20583] gi|330404330|gb|EGG83875.1| hypothetical protein HMPREF0992_01286 [Lachnospiraceae bacterium 6_1_63FAA] Length = 164 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 77/149 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM A ++A A E+P+G V V KII+R NR K+ +HAEI AIR Sbjct: 1 MTEDERFMREAKKQAMKAYALREVPIGCVIVYEGKIIARGYNRRNTDKNTVSHAEINAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L LYVTLEPC MCA AI AR+ R+ G+ NPK G + + Sbjct: 61 KASKKLGDWRLEGCTLYVTLEPCQMCAGAIIQARVDRVVIGSMNPKAGCAGSVLNLLEMD 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ FFKE R Sbjct: 121 GFNHKAEVTRGVLEEECSSMLSGFFKELR 149 >gi|322834117|ref|YP_004214144.1| CMP/dCMP deaminase zinc-binding protein [Rahnella sp. Y9602] gi|321169318|gb|ADW75017.1| CMP/dCMP deaminase zinc-binding protein [Rahnella sp. Y9602] Length = 180 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 79/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+ A A E+PVGAV VL+N++I NR+ D TAHAEI+A+R Sbjct: 9 MNDDEHWMRQAMNLALKAQDEGEVPVGAVLVLDNQVIGEGWNRSIGHHDPTAHAEIMALR 68 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 G + L LYVTLEPC MCA A+ +RIRR+ YGA++ K G + Sbjct: 69 QGGNAVQNYRLLNATLYVTLEPCVMCAGAMIHSRIRRVVYGAADAKTGAAGSLLDVLRHP 128 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + + + FF+ RR Sbjct: 129 GMNHQVEITAGVLAEACSEQLSAFFRFRR 157 >gi|189347424|ref|YP_001943953.1| CMP/dCMP deaminase zinc-binding [Chlorobium limicola DSM 245] gi|189341571|gb|ACD90974.1| CMP/dCMP deaminase zinc-binding [Chlorobium limicola DSM 245] Length = 152 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/150 (37%), Positives = 78/150 (52%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAI 59 M N +M A EA A + E+PVGAV +N I R N+ L D TAHAE++A+ Sbjct: 1 MHNLNFYMEQAFREALKAYEKKEVPVGAVVFDSNGNIAGRGHNQVEALSDATAHAEMIAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L + L L VT+EPC MCA AI A++ R+ +GA +PK G Sbjct: 61 TSAMATLGSKYLDACTLAVTMEPCPMCAGAIVNAKVGRVIFGAYDPKMGASGTVLNITGC 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ GI E + ++++DFF E R Sbjct: 121 RELNHQPEVIGGIMENKCSELLRDFFSELR 150 >gi|251781204|ref|ZP_04824120.1| tRNA-specific adenosine deaminase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243081651|gb|EES47712.1| tRNA-specific adenosine deaminase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 152 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 50/103 (48%), Positives = 65/103 (63%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A EEA+ A + E+P+GAV V +N +IS+A N LKD TAHAEILAIR + L Sbjct: 3 FLDIAKEEAKKAMSKGEVPIGAVIVKDNIVISKAHNLKETLKDATAHAEILAIREASKFL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 L ++YVTLEPCTMC +AI +RI +L+ G N G Sbjct: 63 EDWRLNGTEMYVTLEPCTMCTSAIIQSRISKLHIGTFNKDMGA 105 >gi|330445259|ref|ZP_08308911.1| tRNA-specific adenosine deaminase monomer [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489450|dbj|GAA03408.1| tRNA-specific adenosine deaminase monomer [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 163 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 53/142 (37%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+E A A E+PVGAV V N ++I NR+ D TAHAEI+A+R ++L Sbjct: 1 MRRAMELAAKAEGEGEVPVGAVVVHNGQVIGEGWNRSIGQHDATAHAEIMALRQAGKVLE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + +YVTLEPC MCA A+ +R+ ++ YGA + K G + + +H Sbjct: 61 NYRLLDTTVYVTLEPCPMCAGAMVHSRVGKVVYGADDLKTGAAGSTMNLLSYDGVNHHVG 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ R +Q FFK RR Sbjct: 121 LVSGVLADECRAQLQAFFKRRR 142 >gi|300770195|ref|ZP_07080074.1| tRNA-specific adenosine deaminase [Sphingobacterium spiritivorum ATCC 33861] gi|300762671|gb|EFK59488.1| tRNA-specific adenosine deaminase [Sphingobacterium spiritivorum ATCC 33861] Length = 154 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 75/143 (52%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A +E+P+GAV V KII + N L DVTAHAE+ A L Sbjct: 18 YMKAALTLAKKAYEEDEVPIGAVIVSQGKIIGKGYNLTERLNDVTAHAEMQAFTAASSYL 77 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVT+EPC MCA A ++ R+ YGA + K G G F H Sbjct: 78 GGKYLKDCTLYVTVEPCVMCAGASYWTQVSRIVYGAPDEKRGASRYGKLF------HPKT 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ ++ ++I FF+++R Sbjct: 132 EIISGVLQEECAELITSFFRQKR 154 >gi|88608086|ref|YP_505986.1| cytidine/deoxycytidylate deaminase family protein [Neorickettsia sennetsu str. Miyayama] gi|88600255|gb|ABD45723.1| cytidine/deoxycytidylate deaminase family protein [Neorickettsia sennetsu str. Miyayama] Length = 144 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 80/143 (55%), Gaps = 4/143 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ A+ + E+PVGAV V +I+ +GNR D TAHAE+ IR + L Sbjct: 5 FMELAMSVARQSDC--EVPVGAVLVRQGAVIASSGNRVFRDSDPTAHAEMFVIREAIQRL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + +LYVTLEPC MC A+SL+R+ L + A + K G I NG T H P Sbjct: 63 GVKFLVDFELYVTLEPCPMCMYAMSLSRVGTLCFAAYDEKRGAISNGC--LGTGTYFHVP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 IY G+ E +++++ FF+ R Sbjct: 121 IIYEGLMEDEAKELLSSFFRILR 143 >gi|289547972|ref|YP_003472960.1| CMP/dCMP deaminase zinc-binding protein [Thermocrinis albus DSM 14484] gi|289181589|gb|ADC88833.1| CMP/dCMP deaminase zinc-binding protein [Thermocrinis albus DSM 14484] Length = 156 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 80/143 (55%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ L EA A + EIPVG V V +II+RA NR LKD TAHAEILAIR + L Sbjct: 8 FVKACLLEAHRAFRKGEIPVGCVVVKEGRIIARAHNRTIALKDPTAHAEILAIRKALKKL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVTLEPC MCA A+ LAR+ ++ + A + K G + + +H Sbjct: 68 GESFLYGCTLYVTLEPCAMCAYALVLARVDKVIFLAQDEKLGAVMSLYNLLDETAFNHRV 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + + + + ++++DFFK R Sbjct: 128 R-WEFLPVEEAGRLLRDFFKNLR 149 >gi|241760058|ref|ZP_04758156.1| cytidine and deoxycytidylate deaminase family protein [Neisseria flavescens SK114] gi|241319512|gb|EER55942.1| cytidine and deoxycytidylate deaminase family protein [Neisseria flavescens SK114] Length = 240 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E+A+ +A E+PVGAV V + I+ A N +V+ HAEI A+ + L Sbjct: 95 FMRLAIEQARQSAALGEVPVGAVIVYQGEAIAAAHNTCIGDHNVSHHAEINALATAGKAL 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + D+Y+TLEPC+MCA+A+ AR+ R+ YGA+ PK GG + + + Sbjct: 155 QNYRLEDCDVYITLEPCSMCASALIQARVGRVIYGAAEPKTGGAGSVVDLFADKRLNKHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI + + ++QDFF +R Sbjct: 215 AILGGILAEECQSVLQDFFAAKR 237 >gi|164686927|ref|ZP_02210955.1| hypothetical protein CLOBAR_00529 [Clostridium bartlettii DSM 16795] gi|164604030|gb|EDQ97495.1| hypothetical protein CLOBAR_00529 [Clostridium bartlettii DSM 16795] Length = 150 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A+ EA+ A + E P+GAV V +++II R N L+D TAHAE+LAI+ L Sbjct: 6 FMNEAINEAKKAYDKGETPIGAVIVKDSEIIGRGHNLTETLRDSTAHAEMLAIKDASETL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + DLYVT+EPC MC+ AI +RI+ + G + K IE F Sbjct: 66 GGWRLTDCDLYVTMEPCIMCSGAIVNSRIKNIIIGTKHIKNANIEKQHTFKMEYFKDSRV 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI E I+Q FFK+ R Sbjct: 126 NVEFGIMEDECSIILQRFFKDLR 148 >gi|90021123|ref|YP_526950.1| tRNA-adenosine deaminase [Saccharophagus degradans 2-40] gi|89950723|gb|ABD80738.1| tRNA-adenosine deaminase [Saccharophagus degradans 2-40] Length = 176 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/128 (42%), Positives = 72/128 (56%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 +E+PVGAV V +NKI+ N D TAHAEI A+R + LP+ LYVT+E Sbjct: 26 HEVPVGAVVVRDNKILGSGFNTPISGCDPTAHAEITALRQAAKNEHNYRLPDATLYVTIE 85 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PCTMC AI AR+ R+ YGA+ PK G I + + +H E G+ + +I Sbjct: 86 PCTMCLGAIMHARVARVVYGATEPKAGVIYSNPVWQQGGFFNHQVEWCGGVLANEATALI 145 Query: 142 QDFFKERR 149 Q FFK+RR Sbjct: 146 QQFFKQRR 153 >gi|307825441|ref|ZP_07655660.1| CMP/dCMP deaminase zinc-binding [Methylobacter tundripaludum SV96] gi|307733616|gb|EFO04474.1| CMP/dCMP deaminase zinc-binding [Methylobacter tundripaludum SV96] Length = 142 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 55/142 (38%), Positives = 78/142 (54%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ AQ A + E+PVGA+ V +N+ I+ N D TAHAE++A+R + Sbjct: 1 MRHAIRLAQRAEQQGEVPVGAIVVRDNRCIAEGWNIPITSHDPTAHAEVVAMRGAGVHVQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MC A+S ARI+RL +GA +PK G + N +H Sbjct: 61 NYRLNDATLYVTLEPCVMCIGAMSHARIKRLVFGAYDPKRGAVCNALSLTDAPFLNHRIS 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 G+ E ++++DFFK RR Sbjct: 121 WDGGVLETECSEMLRDFFKARR 142 >gi|225867781|ref|YP_002743729.1| deaminase [Streptococcus equi subsp. zooepidemicus] gi|225701057|emb|CAW97859.1| putative deaminase [Streptococcus equi subsp. zooepidemicus] Length = 164 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ + L++EIP+G V V II R N E HAEI+AI Sbjct: 11 FMREALKEAEKSLLKDEIPIGCVIVKAGHIIGRGHNAREERNQAIMHAEIMAINEANAHE 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LARI + YGASN K GG + Q T +H Sbjct: 71 GNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGASNQKFGGAGSLYQILTDKRLNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ +++Q FF++RR Sbjct: 131 QLEVGLLADDCAKLMQTFFRQRR 153 >gi|329770051|ref|ZP_08261446.1| hypothetical protein HMPREF0433_01210 [Gemella sanguinis M325] gi|328837362|gb|EGF86992.1| hypothetical protein HMPREF0433_01210 [Gemella sanguinis M325] Length = 155 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK+ + +M ALEEA++A + E+P+GAV V++ ++++ N E + HAE++AI+ Sbjct: 1 MKEHSYYMELALEEARSAYEKGEVPIGAVLVVDGQVVACGHNTREETQQALNHAEMIAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C L LY T+EPC MC+ AI AR+ + YGA +PK G + + Sbjct: 61 KACEKQGFWRLDNSYLYTTIEPCVMCSGAIVQARVENVIYGAKDPKYGCCGSCMDLVSDN 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E ++++FFKE R Sbjct: 121 KFNHQANVISGVLEDECSSLMRNFFKELR 149 >gi|332754174|gb|EGJ84543.1| tRNA-specific adenosine deaminase [Shigella flexneri K-671] Length = 156 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/142 (40%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 1 MRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H E Sbjct: 61 NYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I GI ++ DFF+ RR Sbjct: 121 ITEGILADECAALLSDFFRMRR 142 >gi|71736711|ref|YP_273597.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|289625949|ref|ZP_06458903.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647891|ref|ZP_06479234.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. aesculi str. 2250] gi|71557264|gb|AAZ36475.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320323193|gb|EFW79282.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. glycinea str. B076] gi|320329536|gb|EFW85525.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330867510|gb|EGH02219.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330874802|gb|EGH08951.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 169 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 73/127 (57%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V N +II R N D +AHAE++AIR R L LP LYVTLEP Sbjct: 31 EVPVGAVVVQNGEIIGRGYNCPISASDPSAHAEMVAIRDAARALDNYRLPGSTLYVTLEP 90 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C+MCA I +R+ R+ YGA PK G +++ QF++ +H G+ + ++ Sbjct: 91 CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRVLFEGGVLSEECGAMLS 150 Query: 143 DFFKERR 149 +FF+ RR Sbjct: 151 EFFRMRR 157 >gi|266621805|ref|ZP_06114740.1| tRNA-specific adenosine deaminase [Clostridium hathewayi DSM 13479] gi|288866494|gb|EFC98792.1| tRNA-specific adenosine deaminase [Clostridium hathewayi DSM 13479] Length = 165 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+ +A+ A E+P+G V V +KII+R NR K+V +HAEI+AI+ Sbjct: 1 MNADEKYMRAAIGQARKAGAIGEVPIGCVIVYEDKIIARGYNRRTIDKNVLSHAEIIAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ + L +YVTLEPC MCA AI ARI ++ G NPK G + Sbjct: 61 KACKKIGDWRLEGCTMYVTLEPCPMCAGAIVQARIPKVVIGCMNPKAGCAGSVLDLLHED 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ +++++FFK R Sbjct: 121 GFNHQVEMEKGVLEEECSRLMKEFFKALR 149 >gi|193077204|gb|ABO11996.2| putative deaminase [Acinetobacter baumannii ATCC 17978] Length = 158 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/139 (42%), Positives = 74/139 (53%), Gaps = 1/139 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A E+A+ AA + EIPVGAV V NK+I N L D TAHAEI AIR C L Sbjct: 1 MQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESLK 60 Query: 68 QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LPE LYVTLEPCTMC A+ ARI+ + +G + PK G + + Q +H Sbjct: 61 NYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGYYNHKF 120 Query: 127 EIYPGISEQRSRQIIQDFF 145 G ++ Q + FF Sbjct: 121 TFEHGCLHEKCAQQLSLFF 139 >gi|302185724|ref|ZP_07262397.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. syringae 642] Length = 169 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 74/127 (58%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V N +II R N D +AHAE++AIR + L LP LYVTLEP Sbjct: 31 EVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRQAAKALDNYRLPGSTLYVTLEP 90 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C+MCA I +R+ R+ YGA PK G +++ QF++ A +H G+ + ++ Sbjct: 91 CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAFLNHRVLFEGGVLGEECGTMLS 150 Query: 143 DFFKERR 149 +FF+ RR Sbjct: 151 EFFRMRR 157 >gi|292489080|ref|YP_003531967.1| tRNA-specific adenosine deaminase [Erwinia amylovora CFBP1430] gi|291554514|emb|CBA22074.1| tRNA-specific adenosine deaminase [Erwinia amylovora CFBP1430] Length = 159 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV VL+N++I NR D TAHAE++A+R G +++ Sbjct: 9 WMRHALRLARRAWDEGEVPVGAVLVLDNQVIGEGWNRPIGHHDPTAHAEMMALRQGGKMI 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI RL YGA + K G + +H Sbjct: 69 ENYRLLDTTLYVTLEPCVMCAGAMIHSRIGRLVYGARDAKTGAAGSLLDVLGHPGMNHQV 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ ++ DFF++RR Sbjct: 129 PAECGLLNDECAAMLSDFFRQRR 151 >gi|292900205|ref|YP_003539574.1| tRNA-specific adenosine deaminase [Erwinia amylovora ATCC 49946] gi|291200053|emb|CBJ47178.1| tRNA-specific adenosine deaminase [Erwinia amylovora ATCC 49946] Length = 164 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV VL+N++I NR D TAHAE++A+R G +++ Sbjct: 14 WMRHALRLARRAWDEGEVPVGAVLVLDNQVIGEGWNRPIGHHDPTAHAEMMALRQGGKMI 73 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI RL YGA + K G + +H Sbjct: 74 ENYRLLDTTLYVTLEPCVMCAGAMIHSRIGRLVYGARDAKTGAAGSLLDVLGHPGMNHQV 133 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ ++ DFF++RR Sbjct: 134 PAECGLLNDECAAMLSDFFRQRR 156 >gi|116750214|ref|YP_846901.1| zinc-binding CMP/dCMP deaminase [Syntrophobacter fumaroxidans MPOB] gi|116699278|gb|ABK18466.1| tRNA-adenosine deaminase [Syntrophobacter fumaroxidans MPOB] Length = 158 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 78/146 (53%), Gaps = 1/146 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + FM ALEEA +E+PVGAV A ++++R NR L D TAHAEIL +R Sbjct: 8 DYFMGIALEEALAGREESEVPVGAVLAGPGGEVLARGHNRPIALCDPTAHAEILVLREAA 67 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 LP LYVTLEPC MC A+ AR+R L +GA +PK G + + + Sbjct: 68 AAAGNYRLPGSVLYVTLEPCAMCVGALLQARVRTLVFGAPDPKSGAAGSVVDLTKVDAFN 127 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI ++++ FF +RR Sbjct: 128 HYVEVIGGIRMAECSELLKKFFLDRR 153 >gi|297539076|ref|YP_003674845.1| CMP/dCMP deaminase zinc-binding protein [Methylotenera sp. 301] gi|297258423|gb|ADI30268.1| CMP/dCMP deaminase zinc-binding protein [Methylotenera sp. 301] Length = 162 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 70/127 (55%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGA+ V + +I R GN + D TAHAEI A+R + L L LYVTLEP Sbjct: 33 EVPVGAIIVKDGVVIGRGGNSPIDTHDPTAHAEIAALRDAAKNLGNYRLVGCSLYVTLEP 92 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MC AI ARI RL YGA++PK G + +H E++ G + ++ Sbjct: 93 CAMCTGAIQHARIARLVYGANDPKTGACGSVVNLMAEPKLNHHTEVFSGELAKECGAMLS 152 Query: 143 DFFKERR 149 +FFK+RR Sbjct: 153 EFFKQRR 159 >gi|312173235|emb|CBX81490.1| tRNA-specific adenosine deaminase [Erwinia amylovora ATCC BAA-2158] Length = 166 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV VL+N++I NR D TAHAE++A+R G +++ Sbjct: 9 WMRHALRLARRAWDEGEVPVGAVLVLDNQVIGEGWNRPIGHHDPTAHAEMMALRQGGKMI 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI RL YGA + K G + +H Sbjct: 69 ENYRLLDTTLYVTLEPCVMCAGAMIHSRIGRLVYGARDAKTGAAGSLLDVLGHPGMNHQV 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ ++ DFF++RR Sbjct: 129 PAECGLLNDECAAMLSDFFRQRR 151 >gi|254796483|ref|YP_003081319.1| tRNA-specific adenosine deaminase [Neorickettsia risticii str. Illinois] gi|254589716|gb|ACT69078.1| tRNA-specific adenosine deaminase [Neorickettsia risticii str. Illinois] Length = 139 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 74/127 (58%), Gaps = 2/127 (1%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V +I+ +GNR D TAHAE+L IR + L + L + +LYVTLEP Sbjct: 14 EVPVGAVLVRQGAVIASSGNRVFRDSDPTAHAEMLVIREAIQRLGVKFLVDFELYVTLEP 73 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MC A+SL+R+ L + A + K G I NG T H P +Y G+ E +++++ Sbjct: 74 CPMCMYAMSLSRVGTLCFAAYDEKRGAISNGC--LGTGTYFHVPMVYEGLMEDEAKELLS 131 Query: 143 DFFKERR 149 FF+ R Sbjct: 132 SFFRILR 138 >gi|119468555|ref|ZP_01611646.1| tRNA-specific adenosine deaminase [Alteromonadales bacterium TW-7] gi|119448063|gb|EAW29328.1| tRNA-specific adenosine deaminase [Alteromonadales bacterium TW-7] Length = 165 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A NEIPVGAV V +N++I+ NR+ D +AHAE++A+R + L Sbjct: 10 WMEQALLYAKQAEQLNEIPVGAVLVKDNQLIASGYNRSITDNDPSAHAEMIAVREAGKAL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC+MCA + +RI+RL +GA + K G + +H Sbjct: 70 NNYRLIDCTLYVTLEPCSMCAGLLVHSRIKRLVFGAPDAKTGSAGSIMNLLQEPRLNHQV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + I +FFK RR Sbjct: 130 EVVGGVLADKCGNTISEFFKRRR 152 >gi|299770395|ref|YP_003732421.1| putative deaminase [Acinetobacter sp. DR1] gi|298700483|gb|ADI91048.1| putative deaminase [Acinetobacter sp. DR1] Length = 158 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/139 (40%), Positives = 76/139 (54%), Gaps = 1/139 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A E+A+ AA + EIPVGA+ V N++I N L D TAHAEI AIR C L+ Sbjct: 1 MQLAYEQAELAAQQGEIPVGAIVVSQNRVIGSGYNAPISLLDPTAHAEIQAIRAACLSLN 60 Query: 68 QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP+ LYVTLEPCTMC A+ ARI+ + +G + PK G + + Q +H Sbjct: 61 NYRLPDDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLQDGYYNHRF 120 Query: 127 EIYPGISEQRSRQIIQDFF 145 G +++ Q + FF Sbjct: 121 TFQQGCLQEKCAQQLSHFF 139 >gi|194735718|ref|YP_002115631.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197301052|ref|ZP_02663371.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204929496|ref|ZP_03220570.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|194711220|gb|ACF90441.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288879|gb|EDY28252.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204321215|gb|EDZ06415.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 172 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G +L Sbjct: 11 WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 71 QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ ++ DFF+ RR Sbjct: 131 DIIEGVLRDECATLLSDFFRMRR 153 >gi|322378196|ref|ZP_08052680.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus sp. M334] gi|321280826|gb|EFX57842.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus sp. M334] Length = 155 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/151 (40%), Positives = 83/151 (54%), Gaps = 4/151 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL EA+ A +EIP+G V V + II R N EL+ HAEI+AI Sbjct: 5 VEEKEVFMREALREAEIALEHDEIPIGCVIVKDGAIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LS+E +D L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 65 NAN--LSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILT 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ GI E I+Q+FF+ RR Sbjct: 123 DERLNHRVDVETGILEDECAAIMQNFFRNRR 153 >gi|194469725|ref|ZP_03075709.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197248207|ref|YP_002147526.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|200387835|ref|ZP_03214447.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205358526|ref|ZP_02657204.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205359943|ref|ZP_02833442.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194456089|gb|EDX44928.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197211910|gb|ACH49307.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|199604933|gb|EDZ03478.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205333662|gb|EDZ20426.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205341963|gb|EDZ28727.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] Length = 172 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G +L Sbjct: 11 WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 71 QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ ++ DFF+ RR Sbjct: 131 DIIEGVLRDECATLLSDFFRMRR 153 >gi|107103282|ref|ZP_01367200.1| hypothetical protein PaerPA_01004351 [Pseudomonas aeruginosa PACS2] Length = 182 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 52/126 (41%), Positives = 71/126 (56%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +II R NR D +AHAE+LAIRM LP LYVTLEPC Sbjct: 48 VPVGAVLVREGEIIGRGFNRPISSHDPSAHAEMLAIRMAAAEAGNYRLPGSTLYVTLEPC 107 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 +MC+ + ARI+RL YG PK G +E+ +F+ +H + G+ + Q++ Sbjct: 108 SMCSGLLVHARIQRLVYGTVEPKSGAVESRGRFFEQEHLNHRVMVEGGVLAEECSQVLSA 167 Query: 144 FFKERR 149 FF+ RR Sbjct: 168 FFRARR 173 >gi|16330356|ref|NP_441084.1| hypothetical protein sll1631 [Synechocystis sp. PCC 6803] gi|1652846|dbj|BAA17764.1| sll1631 [Synechocystis sp. PCC 6803] Length = 164 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 81/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+ A+ A EIPVGAV V ++++ NR + ++ AHAE+LAI+ CR Sbjct: 11 WMQMAIALAEEAGNVGEIPVGAVVVNAMGEVLATGQNRKQRDQNPIAHAEMLAIQTACRR 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L E LYVTLEPC MC AI AR+ L YG +PK G I++ A +H Sbjct: 71 LGHWRLNECTLYVTLEPCPMCTGAIIQARLGLLVYGTPDPKTGTIDSVFDLAASAASNHH 130 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G+ +++ R+ +QD+F + R Sbjct: 131 LQSLGGVCQEQCREQLQDWFAQHR 154 >gi|269976007|ref|ZP_06183011.1| tRNA-specific adenosine deaminase [Mobiluncus mulieris 28-1] gi|306817398|ref|ZP_07451143.1| tRNA-specific adenosine deaminase [Mobiluncus mulieris ATCC 35239] gi|269935835|gb|EEZ92365.1| tRNA-specific adenosine deaminase [Mobiluncus mulieris 28-1] gi|304649839|gb|EFM47119.1| tRNA-specific adenosine deaminase [Mobiluncus mulieris ATCC 35239] Length = 174 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 80/144 (55%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL--KDVTAHAEILAIRMGCRI 65 + A + A AA+ ++PVGAV + I++ G RE+ D TAHAEI+A+R Sbjct: 14 LDTAFDLAARAAVSGDVPVGAVLLTAQGIVAGLGLNQREIPPHDPTAHAEIVAMREAAGR 73 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L L VTLEPCTMCA AI ARI RL +GA + K G + + +H Sbjct: 74 LRTWNLAGCTLVVTLEPCTMCAGAIVTARISRLIFGAWDSKAGACGSIRDVVRDSRLNHQ 133 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G++E+R ++QDFF +RR Sbjct: 134 VEVIGGVAEKRGVALLQDFFGKRR 157 >gi|90962204|ref|YP_536120.1| cytosine/adenosine deaminase [Lactobacillus salivarius UCC118] gi|301300462|ref|ZP_07206662.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus salivarius ACS-116-V-Col5a] gi|90821398|gb|ABE00037.1| Cytosine/adenosine deaminase [Lactobacillus salivarius UCC118] gi|300851959|gb|EFK79643.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus salivarius ACS-116-V-Col5a] Length = 166 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/139 (39%), Positives = 76/139 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+ AA E+P+G V V + KII R N ++ T HAE+LAI + Sbjct: 11 FMKEALFEAKLAAKIGEVPIGCVIVKDGKIIGRGHNLREHSQNATLHAEMLAIEEANETV 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L+VTLEPC MC+ AI +RI +YYGAS+PK G + + +H Sbjct: 71 NSWRLVDTQLFVTLEPCPMCSGAIINSRIPEVYYGASDPKAGTVGTLMNLLEDSRFNHQS 130 Query: 127 EIYPGISEQRSRQIIQDFF 145 + GI E I++DFF Sbjct: 131 FVEKGILENECASILKDFF 149 >gi|261212078|ref|ZP_05926364.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. RC341] gi|260838686|gb|EEX65337.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. RC341] Length = 170 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR +L Sbjct: 13 FMRRAITLAAQAEAQGEVPVGAVLVRDGEIIAEGWNCSITHHDATAHAEIEVIRKAGNVL 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ +H Sbjct: 73 NNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAAYHYA 132 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R +Q FF+ RR Sbjct: 133 TVEKGLLEEECRTQLQAFFQRRR 155 >gi|325130078|gb|EGC52865.1| tRNA-specific adenosine deaminase [Neisseria meningitidis OX99.30304] gi|325138115|gb|EGC60688.1| tRNA-specific adenosine deaminase [Neisseria meningitidis ES14902] gi|325142208|gb|EGC64629.1| tRNA-specific adenosine deaminase [Neisseria meningitidis 961-5945] Length = 163 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+A+ +AL EIPVGAV V + KII+ A N +V+ HAEI A+ + Sbjct: 19 FMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 79 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 138 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 139 AIRGGILQEECRAVLSRFFQNKR 161 >gi|307700388|ref|ZP_07637427.1| cytidine and deoxycytidylate deaminase zinc-binding region [Mobiluncus mulieris FB024-16] gi|307614373|gb|EFN93603.1| cytidine and deoxycytidylate deaminase zinc-binding region [Mobiluncus mulieris FB024-16] Length = 174 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 80/144 (55%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL--KDVTAHAEILAIRMGCRI 65 + A + A AA+ ++PVGAV + I++ G RE+ D TAHAEI+A+R Sbjct: 14 LDTAFDLAARAAVSGDVPVGAVLLTAQGIVTGLGLNQREIPPHDPTAHAEIVAMREAAGR 73 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L L VTLEPCTMCA AI ARI RL +GA + K G + + +H Sbjct: 74 LRTWNLAGCTLVVTLEPCTMCAGAIVTARISRLIFGAWDSKAGACGSIRDVVRDSRLNHQ 133 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G++E+R ++QDFF +RR Sbjct: 134 VEVIGGVAEKRGVALLQDFFGKRR 157 >gi|198245375|ref|YP_002216635.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197939891|gb|ACH77224.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 172 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G +L Sbjct: 11 WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 71 QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ ++ DFF+ RR Sbjct: 131 DIIEGVLRDECATLLSDFFRMRR 153 >gi|187478486|ref|YP_786510.1| zinc-binding cytidine/deoxycytidylate deaminase [Bordetella avium 197N] gi|115423072|emb|CAJ49603.1| putative zinc-binding cytidine/deoxycytidylate deaminase [Bordetella avium 197N] Length = 157 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 82/145 (56%), Gaps = 1/145 (0%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAG-NRNRELKDVTAHAEILAIRMGCR 64 ++M ALE+A+ A + E+PVGAV V + AG NR D TAHAE++A+R R Sbjct: 7 IYMHMALEQARLAYDQGEVPVGAVVVDGEGRVLGAGYNRTILDSDPTAHAEVMALRAASR 66 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L+ LP + LYVTLEPC MC A+ AR+ R+ +GA +PK G + +A +H Sbjct: 67 HLANYRLPGLTLYVTLEPCVMCIGAMLHARLTRVVFGAHDPKTGACGSVLDVGAVAQLNH 126 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + G+ +++ FF+ERR Sbjct: 127 HTTVVGGVLAPPCGDLLRAFFRERR 151 >gi|330892455|gb|EGH25116.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. mori str. 301020] gi|330894515|gb|EGH27176.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. mori str. 301020] Length = 169 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/127 (40%), Positives = 73/127 (57%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V N +II R N D +AHAE++A+R R L LP LYVTLEP Sbjct: 31 EVPVGAVVVQNGEIIGRGYNCPISASDPSAHAEMVAVRDAARALDNYRLPGSTLYVTLEP 90 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C+MCA I +R+ R+ YGA PK G +++ QF++ +H G+ + ++ Sbjct: 91 CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRVLFEGGVLSEECGAMLS 150 Query: 143 DFFKERR 149 +FF+ RR Sbjct: 151 EFFRMRR 157 >gi|225869728|ref|YP_002745675.1| deaminase [Streptococcus equi subsp. equi 4047] gi|225699132|emb|CAW92326.1| putative deaminase [Streptococcus equi subsp. equi 4047] Length = 164 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ + L++EIP+G V V II R N E HAEI+AI Sbjct: 11 FMREALKEAEKSLLKDEIPIGCVIVKAGHIIGRGHNAREERNQAIMHAEIMAINEANAHE 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LARI + YGASN K GG + Q T +H Sbjct: 71 GNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGASNQKFGGAGSLYQILTDERLNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ +++Q FF++RR Sbjct: 131 QLEVGLLADDCAKLMQTFFRQRR 153 >gi|283477539|emb|CAY73455.1| tRNA-specific adenosine deaminase [Erwinia pyrifoliae DSM 12163] Length = 157 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 77/142 (54%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ A E+PVGAV VL+ + I NR D TAHAE++A+R G +++ Sbjct: 1 MRHALRLARRAWDEGEVPVGAVLVLDGQAIGEGWNRPIGQHDPTAHAEMMALRQGGKVIE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ R+ RL YGA + K G + A +H + Sbjct: 61 NYRLLDTTLYVTLEPCVMCAGAMIHGRVGRLVYGARDAKTGAAGSLLDVLGHAGMNHHVQ 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ ++ DFF++RR Sbjct: 121 VDCGVLRDECAAMLSDFFRQRR 142 >gi|205353664|ref|YP_002227465.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857975|ref|YP_002244626.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|205273445|emb|CAR38422.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206709778|emb|CAR34130.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326628768|gb|EGE35111.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 183 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G +L Sbjct: 22 WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 82 QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ ++ DFF+ RR Sbjct: 142 DIIEGVLRDECATLLSDFFRMRR 164 >gi|56412555|ref|YP_149630.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361490|ref|YP_002141126.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56126812|gb|AAV76318.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197092966|emb|CAR58397.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|320087069|emb|CBY96838.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 183 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G +L Sbjct: 22 WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 82 QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ ++ DFF+ RR Sbjct: 142 DIIEGVLRDECATLLSDFFRMRR 164 >gi|304405747|ref|ZP_07387405.1| CMP/dCMP deaminase zinc-binding [Paenibacillus curdlanolyticus YK9] gi|304344990|gb|EFM10826.1| CMP/dCMP deaminase zinc-binding [Paenibacillus curdlanolyticus YK9] Length = 148 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/142 (37%), Positives = 77/142 (54%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M+ A+EEA+ A E+P+GAV V N ++I R N D TAHAEI+AIR + + Sbjct: 1 MAEAIEEARKAEAIGEVPIGAVIVRNGEVIGRGYNLRETDHDATAHAEIIAIREASKHIE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA AI +R++R+ YG +PK G +H E Sbjct: 61 AWRLLDSTLYVTLEPCPMCAGAIVQSRVKRVVYGTHDPKAGCAGTLMNLLQEPRFNHETE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ ++ ++ FF+ R Sbjct: 121 LTSGVMQEECASLLTTFFRRLR 142 >gi|257487178|ref|ZP_05641219.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331009206|gb|EGH89262.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 169 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/127 (40%), Positives = 73/127 (57%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V N +II R N D +AHAE++A+R R L LP LYVTLEP Sbjct: 31 EVPVGAVVVQNGEIIGRGYNCPISASDPSAHAEMVAVRDAARALDNYRLPGSTLYVTLEP 90 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C+MCA I +R+ R+ YGA PK G +++ QF++ +H G+ + ++ Sbjct: 91 CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRVLFEGGVLSEECGAMLS 150 Query: 143 DFFKERR 149 +FF+ RR Sbjct: 151 EFFRMRR 157 >gi|219870714|ref|YP_002475089.1| tRNA-adenosine deaminase [Haemophilus parasuis SH0165] gi|219690918|gb|ACL32141.1| tRNA-adenosine deaminase, cytosine/adenosine deaminases [Haemophilus parasuis SH0165] Length = 157 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 76/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A EIPVGAV V II NR L D TAHAEI AIRM + + Sbjct: 1 MQYALSLADKAEAEGEIPVGAVLVDKTGNIIGEGWNRAIILSDPTAHAEIQAIRMAGQQI 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPCTMCA AI +RI RL +GAS+ K G + + + +H Sbjct: 61 QNYRLLDTTLYVTLEPCTMCAGAILHSRIGRLVFGASDYKTGALGSRFHLFEDYKMNHFL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ Q I FF++RR Sbjct: 121 QIRGGVMANECSQKISAFFRKRR 143 >gi|322514212|ref|ZP_08067274.1| tRNA-specific adenosine deaminase [Actinobacillus ureae ATCC 25976] gi|322119905|gb|EFX91914.1| tRNA-specific adenosine deaminase [Actinobacillus ureae ATCC 25976] Length = 196 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/144 (41%), Positives = 81/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL A A +EIPVGAV + ++ II N+ +L D +AHAE+LAIR ++ Sbjct: 43 FMQYALALADRAEAIDEIPVGAVLIDSDGNIIGEGWNQVIQLADPSAHAEMLAIRQAGKV 102 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L LYVTLEPCTMCA AI +R+ RL +GAS+ K G I + + +H Sbjct: 103 QNNYRLLGCTLYVTLEPCTMCAGAILHSRLHRLVFGASDYKTGAIGSRFHLFEDYKMNHF 162 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q I FF+ RR Sbjct: 163 LEIRGGVLAEDCSQKISRFFQRRR 186 >gi|227876439|ref|ZP_03994551.1| nucleoside deaminase [Mobiluncus mulieris ATCC 35243] gi|227842980|gb|EEJ53177.1| nucleoside deaminase [Mobiluncus mulieris ATCC 35243] Length = 174 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 80/144 (55%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL--KDVTAHAEILAIRMGCRI 65 + A + A AA+ ++PVGAV + I++ G RE+ D TAHAEI+A+R Sbjct: 14 LDTAFDLAARAAVSGDVPVGAVLLTAQGIVAGLGLNQREIPPHDPTAHAEIVAMREAAGR 73 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L L VTLEPCTMCA AI ARI RL +GA + K G + + +H Sbjct: 74 LRTWNLAGCTLVVTLEPCTMCAGAIVTARISRLIFGAWDSKAGACGSIRDVVRDSRLNHQ 133 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G++E+R ++QDFF +RR Sbjct: 134 VEVIGGVAEKRGVALLQDFFGKRR 157 >gi|269965211|ref|ZP_06179345.1| zinc-binding domain protein [Vibrio alginolyticus 40B] gi|269830197|gb|EEZ84424.1| zinc-binding domain protein [Vibrio alginolyticus 40B] Length = 169 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+E A+ A E+PVGAV V + +II+ NR+ D TAHAEI +R + L Sbjct: 1 MRRAMELAEQAEAEGEVPVGAVLVKDGEIIAEGWNRSIGTNDATAHAEIQTLRKAGQKLE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +R++R+ +GA + K G + +H Sbjct: 61 NYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAAYHYAL 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ E R +Q FFK RR Sbjct: 121 VEKGLLEDECRTQLQAFFKRRR 142 >gi|309380104|emb|CBX21515.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 239 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+A+ +AL EIPVGAV V + KII+ A N +V+ HAEI A+ + Sbjct: 95 FMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHS 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237 >gi|153853556|ref|ZP_01994936.1| hypothetical protein DORLON_00926 [Dorea longicatena DSM 13814] gi|149753711|gb|EDM63642.1| hypothetical protein DORLON_00926 [Dorea longicatena DSM 13814] Length = 169 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+++A+ A E+P+G V V +KII R NR + AHAE++AI+ + + Sbjct: 10 YMKEAIKQAKKAYAIGEVPIGCVIVYQDKIIGRGYNRRTIDNNTLAHAELIAIKKASKKM 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + +YVTLEPC MC+ AI +R+ R+ G NPK G + + +H Sbjct: 70 NDWRLEDCTMYVTLEPCQMCSGAIVQSRMTRVVVGCMNPKAGCAGSILNLLDIPEFNHQV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ Q+++ FFKE R Sbjct: 130 ELTTGVMEEECSQMMKSFFKELR 152 >gi|121634737|ref|YP_974982.1| putative cytosine deaminase [Neisseria meningitidis FAM18] gi|120866443|emb|CAM10189.1| putative cytosine deaminase (EC 3.5.4.1) [Neisseria meningitidis FAM18] gi|325132183|gb|EGC54879.1| tRNA-specific adenosine deaminase [Neisseria meningitidis M6190] gi|325136130|gb|EGC58739.1| tRNA-specific adenosine deaminase [Neisseria meningitidis M0579] gi|325198167|gb|ADY93623.1| tRNA-specific adenosine deaminase [Neisseria meningitidis G2136] gi|325202278|gb|ADY97732.1| tRNA-specific adenosine deaminase [Neisseria meningitidis M01-240149] Length = 239 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+A+ +AL EIPVGAV V + KII+ A N +V+ HAEI A+ + Sbjct: 95 FMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237 >gi|284046792|ref|YP_003397132.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM 14684] gi|283951013|gb|ADB53757.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM 14684] Length = 154 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 54/148 (36%), Positives = 81/148 (54%), Gaps = 2/148 (1%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRM 61 + +M A+ EA A +++PVGAV V + ++++ G+ REL+ D TAHAE +A+R Sbjct: 8 RDEYYMRLAMREADRALEHDDVPVGAVVVHDGEVVA-TGHNERELRQDPTAHAEAIALRE 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L + + LYVTLEPC MCA AI LAR+ R+ +G +PK G + Sbjct: 67 AARHLGSWRVLDTVLYVTLEPCAMCAGAIVLARVPRVVFGTWDPKAGAAGSVLDVLDQPQ 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ ++ FF RR Sbjct: 127 LNHRPEVDGGLLADECAAQLRAFFASRR 154 >gi|312131614|ref|YP_003998954.1| cmp/dcmp deaminase zinc-binding protein [Leadbetterella byssophila DSM 17132] gi|311908160|gb|ADQ18601.1| CMP/dCMP deaminase zinc-binding protein [Leadbetterella byssophila DSM 17132] Length = 153 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 81/144 (56%), Gaps = 6/144 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL A+ A + EIPVGA+ V + K II + N+ +L DVTAHAEILA+ + Sbjct: 14 FMQKALTLAEEAFDQGEIPVGALVVADGKTIIGKGYNQTEKLTDVTAHAEILALSAASQY 73 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L + LYVTLEPC MCA A++ +++ R+ + AS+ K G + + H Sbjct: 74 LGAKYLKDCTLYVTLEPCMMCAGALAWSQVSRIVFAASDEK-----RGFSLWEPSVLHPK 128 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + +++ FF+ R Sbjct: 129 TEVIKGVLANEAGALLKAFFRRLR 152 >gi|261401120|ref|ZP_05987245.1| tRNA-specific adenosine deaminase [Neisseria lactamica ATCC 23970] gi|269208892|gb|EEZ75347.1| tRNA-specific adenosine deaminase [Neisseria lactamica ATCC 23970] Length = 239 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+A+ +AL EIPVGAV V + KII+ A N +V+ HAEI A+ + Sbjct: 95 FMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237 >gi|331005351|ref|ZP_08328736.1| tRNA-specific adenosine-34 deaminase [gamma proteobacterium IMCC1989] gi|330420848|gb|EGG95129.1| tRNA-specific adenosine-34 deaminase [gamma proteobacterium IMCC1989] Length = 158 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/128 (45%), Positives = 71/128 (55%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 +EIPVGAV V +N+II N+ L D TAHAEI A+R + L LYVTLE Sbjct: 24 DEIPVGAVVVKDNEIIGSGFNQPISLCDPTAHAEIQALRNAANHIGNYRLNSATLYVTLE 83 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI +RI RL YGA+ PK G I + TQ A +H G+ + +II Sbjct: 84 PCGMCAGAIVHSRIARLVYGATEPKAGVIVSQTQQLDKAYLNHKVLYQGGVCAEECSEII 143 Query: 142 QDFFKERR 149 FF RR Sbjct: 144 SVFFSRRR 151 >gi|291537693|emb|CBL10805.1| Cytosine/adenosine deaminases [Roseburia intestinalis M50/1] Length = 154 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ +A+ A +E+P+G V V ++KII+R NR + AHAE+ AIR Sbjct: 1 MNQDEKYMKAAIRQAKKAYALDEVPIGCVIVQDDKIIARGYNRRNTEGNTLAHAELTAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + +YVTLEPC MCA AI +R++++ G+ NPK G + + Sbjct: 61 KASKKTGDWRLEDCTMYVTLEPCQMCAGAIVQSRMKKVVIGSMNPKAGCAGSVLNLLQMQ 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + ++ FFKE R Sbjct: 121 QFNHQVEIEKGVLGEECSAMLSTFFKELR 149 >gi|225026664|ref|ZP_03715856.1| hypothetical protein EUBHAL_00916 [Eubacterium hallii DSM 3353] gi|224956034|gb|EEG37243.1| hypothetical protein EUBHAL_00916 [Eubacterium hallii DSM 3353] Length = 178 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+++A+ A ++P+G V V + KII+R N+ + K V AHAE+LA++ C+ L Sbjct: 15 FMKEAIKQAKKAEAIGDVPIGCVIVHDGKIIARGYNKRNKDKTVLAHAELLAMKKACKKL 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + +Y+TLEPC MCA AI AR+ R+ G+ N K G + + +H Sbjct: 75 GDWRLEDCTMYITLEPCQMCAGAIVQARVTRVVIGSMNAKAGCGGSILNLLEMQEFNHQA 134 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ ++ +++ FF++ R Sbjct: 135 EVERGVLQEECSEMLSAFFRKLR 157 >gi|330975928|gb|EGH75994.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 169 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 74/127 (58%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V N +II R N D +AHAE++AIR + L LP LYVTLEP Sbjct: 31 EVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRDAAKALDNYRLPGSTLYVTLEP 90 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C+MCA I +R+ R+ YGA PK G +++ QF++ A +H G+ + ++ Sbjct: 91 CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAFLNHRVVFEGGVLGEECGTMLS 150 Query: 143 DFFKERR 149 +FF+ RR Sbjct: 151 EFFRMRR 157 >gi|221133296|ref|ZP_03559601.1| CMP/dCMP deaminase, zinc-binding protein [Glaciecola sp. HTCC2999] Length = 175 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/152 (38%), Positives = 86/152 (56%), Gaps = 6/152 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ ++M+ AL A A E+PVGAV VL+N+II NR+ D HAEI+AI+ Sbjct: 7 MEQDELWMTHALSLADKAQQTGEVPVGAVIVLDNQIIGEGYNRSIINHDPCGHAEIMAIQ 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK---GGGIENGTQFY 117 + ++ + + +YVTLEPC MCA AI AR++R+ +GAS+ K G I N Q Sbjct: 67 SAAQHINNYRILDATMYVTLEPCAMCAGAIVHARMKRVVFGASDLKTGCAGSILNLLQHD 126 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 L +H E+ G+ + I FFK+RR Sbjct: 127 KL---NHQVELQRGVLSELCSAKISQFFKDRR 155 >gi|82702354|ref|YP_411920.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Nitrosospira multiformis ATCC 25196] gi|82410419|gb|ABB74528.1| tRNA-adenosine deaminase [Nitrosospira multiformis ATCC 25196] Length = 163 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 75/143 (52%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE + A E+PVGA+ V N I+ R N D TAHAE++A+R R L Sbjct: 8 FMHVALELSAQAEQAGEVPVGAIVVRNGTIVGRGYNCPISTSDPTAHAEVMALRDAGRHL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MC AI ARI RL YGA++PK G + +H Sbjct: 68 GNYRLGDCTLYVTLEPCAMCMGAIFHARIARLVYGAADPKTGACGSVINLSAELRLNHHL 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + ++ FF +RR Sbjct: 128 QVTRGVLAEEGGYKLKQFFAKRR 150 >gi|323705214|ref|ZP_08116790.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacterium xylanolyticum LX-11] gi|323535640|gb|EGB25415.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacterium xylanolyticum LX-11] Length = 137 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/142 (41%), Positives = 77/142 (54%), Gaps = 5/142 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A++EA + E+PVGAV V + II R N KD T HAEI AI+ C+ + Sbjct: 1 MKAAIDEAIISFKLGEMPVGAVVVKDGIIIGRGYNLKETEKDATQHAEINAIKDACKSIG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L LYVTLEPC MCA AI +RI+R+Y GA + G GT + L + E Sbjct: 61 DWRLNGASLYVTLEPCPMCAGAIIESRIKRVYVGAESRDNGA--AGTVYDLL---NKKAE 115 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y GI E +++I DFF R Sbjct: 116 VYFGIMEDECKKLINDFFSRLR 137 >gi|303251559|ref|ZP_07337733.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303252205|ref|ZP_07338373.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302648988|gb|EFL79176.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302649557|gb|EFL79739.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 174 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 61/140 (43%), Positives = 77/140 (55%), Gaps = 1/140 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALE A A EIPVGAV V II N+ +L D +AHAE+LAIR ++ Sbjct: 21 FMRYALELADRAEAIGEIPVGAVLVDQEGNIIGEGWNQVIQLSDPSAHAEMLAIRQAGKV 80 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + LYVTLEPCTMCA AI +R+RRL +GAS+ K G I + + +H Sbjct: 81 QRNYRLLDCTLYVTLEPCTMCAGAILHSRLRRLVFGASDYKTGAIGSRFHLFEDYKMNHF 140 Query: 126 PEIYPGISEQRSRQIIQDFF 145 EI G+ + Q I FF Sbjct: 141 LEIRGGVLAEECSQKISRFF 160 >gi|229828779|ref|ZP_04454848.1| hypothetical protein GCWU000342_00853 [Shuttleworthia satelles DSM 14600] gi|229793373|gb|EEP29487.1| hypothetical protein GCWU000342_00853 [Shuttleworthia satelles DSM 14600] Length = 154 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 57/142 (40%), Positives = 73/142 (51%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ +A+ A E+P+G V KII+R NR V HAEI AI+ CR L Sbjct: 1 MKEAIRQARKAEAIEEVPIGCVIEREGKIIARGYNRRNIDHSVLKHAEITAIQKACRKLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA AI ARI R+ GA NPK G + + +H E Sbjct: 61 DWRLEDCTLYVTLEPCQMCAGAIVQARIPRVVIGAMNPKAGSAGSVINLLQMREFNHQAE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I G+ E+ ++ FF E R Sbjct: 121 IEKGVMEEDCSALLSHFFAELR 142 >gi|165975988|ref|YP_001651581.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149887|ref|YP_001968412.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307247548|ref|ZP_07529592.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307252128|ref|ZP_07534027.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256596|ref|ZP_07538377.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307261030|ref|ZP_07542712.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263211|ref|ZP_07544831.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|165876089|gb|ABY69137.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189915018|gb|ACE61270.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306855913|gb|EFM88072.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306860428|gb|EFM92442.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306865006|gb|EFM96908.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306869332|gb|EFN01127.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871428|gb|EFN03152.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 196 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 61/140 (43%), Positives = 77/140 (55%), Gaps = 1/140 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALE A A EIPVGAV V II N+ +L D +AHAE+LAIR ++ Sbjct: 43 FMRYALELADRAEAIGEIPVGAVLVDQEGNIIGEGWNQVIQLSDPSAHAEMLAIRQAGKV 102 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + LYVTLEPCTMCA AI +R+RRL +GAS+ K G I + + +H Sbjct: 103 QRNYRLLDCTLYVTLEPCTMCAGAILHSRLRRLVFGASDYKTGAIGSRFHLFEDYKMNHF 162 Query: 126 PEIYPGISEQRSRQIIQDFF 145 EI G+ + Q I FF Sbjct: 163 LEIRGGVLAEECSQKISRFF 182 >gi|297620926|ref|YP_003709063.1| tRNA-specific adenosine deaminase [Waddlia chondrophila WSU 86-1044] gi|297376227|gb|ADI38057.1| tRNA-specific adenosine deaminase [Waddlia chondrophila WSU 86-1044] Length = 176 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 55/146 (37%), Positives = 81/146 (55%), Gaps = 4/146 (2%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL+EA A ++ E+PVGA+ V K+I+R N+ L+D TAHAE+L I + Sbjct: 21 TYMLAALKEAWKAFVKGEVPVGAILVKEGKVIARGHNQVEMLRDATAHAEMLCITVAEAA 80 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-- 123 L LY T+EPC+MCA A+ L+R+ L +GA + + G NG+ H Sbjct: 81 EDNWRLNGATLYCTIEPCSMCAGAMLLSRVSTLVWGAPDIRHGA--NGSWVNLFGKPHPT 138 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ GI ++QDFFK+RR Sbjct: 139 HEIQVRNGILADFCAMLMQDFFKKRR 164 >gi|289677917|ref|ZP_06498807.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. syringae FF5] gi|330895911|gb|EGH28196.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. japonica str. M301072PT] Length = 170 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 74/127 (58%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V N +II R N D +AHAE++AIR + L LP LYVTLEP Sbjct: 32 EVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRDAAKALDNYRLPGSTLYVTLEP 91 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C+MCA I +R+ R+ YGA PK G +++ QF++ A +H G+ + ++ Sbjct: 92 CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAFLNHRVLFEGGVLGEECGTMLS 151 Query: 143 DFFKERR 149 +FF+ RR Sbjct: 152 EFFRMRR 158 >gi|222152093|ref|YP_002561253.1| hypothetical protein MCCL_1850 [Macrococcus caseolyticus JCSC5402] gi|222121222|dbj|BAH18557.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 161 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 50/144 (34%), Positives = 79/144 (54%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FM A++EA+ A NE+P+GAV + + ++I R N ++ HAE++AI + Sbjct: 5 IFMQMAIDEAKKAYKINEVPIGAVVIKHGEVIGRGHNLRESSQNPLMHAEVVAINEASKN 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L E LYVTLEPC MC+ AI ++RI + YGA + KGG + + +H Sbjct: 65 IGSWRLEECVLYVTLEPCVMCSGAIVMSRIPTVVYGAHDAKGGCSGSLMNLLHESRFNHQ 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI + +++DFFK R Sbjct: 125 ATVIAGIKHEECSMLLKDFFKSLR 148 >gi|330969043|gb|EGH69109.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. aceris str. M302273PT] Length = 169 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/147 (40%), Positives = 82/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K FM AL A AL E+PVGAV V N +I+ R N D +AHAE++AIR Sbjct: 11 KDQYFMHEALALAAQGALLGEVPVGAVVVQNGEIVGRGYNCPISGSDPSAHAEMVAIRDA 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ A Sbjct: 71 AKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVTRVVYGALEPKAGIVQSQGQFFSQAFL 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 131 NHRVLFEGGVLGEECGTMLSEFFRMRR 157 >gi|302384616|ref|YP_003820438.1| CMP/dCMP deaminase zinc-binding protein [Clostridium saccharolyticum WM1] gi|302195244|gb|ADL02815.1| CMP/dCMP deaminase zinc-binding protein [Clostridium saccharolyticum WM1] Length = 164 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ +A+ A E+P+G V V +KII+R NR K+V +HAEI AIR CR + Sbjct: 7 YMRAAIRQAEKAGAMGEVPIGCVIVYEDKIIARGYNRRTIDKNVLSHAEINAIRKACRKV 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +YVTLEPC MCA AI ARI ++ G N K G + + +H Sbjct: 67 GDWRLEGCTMYVTLEPCPMCAGAIVQARIPKVIMGCMNAKAGCAGSVLDLFHQDGLNHQV 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E G+ ++++DFFK R Sbjct: 127 ETESGVLGDECSRLMKDFFKALR 149 >gi|239930296|ref|ZP_04687249.1| cytidine/deoxycytidine deaminase [Streptomyces ghanaensis ATCC 14672] gi|291438644|ref|ZP_06578034.1| cytidine/deoxycytidine deaminase [Streptomyces ghanaensis ATCC 14672] gi|291341539|gb|EFE68495.1| cytidine/deoxycytidine deaminase [Streptomyces ghanaensis ATCC 14672] Length = 161 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 2/143 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL+EA+ A ++PVGAV + + +++R N D TAHAE+LA+R Sbjct: 19 MRLALDEAERAVRGGDVPVGAVVLAPDGTTVLARGHNEREAAGDPTAHAEVLAVRRAAAE 78 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L Q L L VTLEPCTMCA AI AR+ R+ YGA + K G + +H Sbjct: 79 LGQWRLAGCTLVVTLEPCTMCAGAIQQARVDRVVYGARDEKAGAAGSLWDLLRDRRLNHR 138 Query: 126 PEIYPGISEQRSRQIIQDFFKER 148 PE+ G+ + +++ +FF+ER Sbjct: 139 PEVVEGVLAEECARLLTEFFRER 161 >gi|66044515|ref|YP_234356.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. syringae B728a] gi|63255222|gb|AAY36318.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. syringae B728a] Length = 169 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 74/127 (58%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V N +II R N D +AHAE++AIR + L LP LYVTLEP Sbjct: 31 EVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRDAAKALDNYRLPGSTLYVTLEP 90 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C+MCA I +R+ R+ YGA PK G +++ QF++ A +H G+ + ++ Sbjct: 91 CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAFLNHRVLFEGGVLGEECGTMLS 150 Query: 143 DFFKERR 149 +FF+ RR Sbjct: 151 EFFRMRR 157 >gi|46143725|ref|ZP_00134574.2| COG0590: Cytosine/adenosine deaminases [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208056|ref|YP_001053281.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae L20] gi|126096848|gb|ABN73676.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 189 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 61/140 (43%), Positives = 77/140 (55%), Gaps = 1/140 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALE A A EIPVGAV V II N+ +L D +AHAE+LAIR ++ Sbjct: 36 FMRYALELADRAEAIGEIPVGAVLVDQEGNIIGEGWNQVIQLSDPSAHAEMLAIRQAGKV 95 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + LYVTLEPCTMCA AI +R+RRL +GAS+ K G I + + +H Sbjct: 96 QRNYRLLDCTLYVTLEPCTMCAGAILHSRLRRLVFGASDYKTGAIGSRFHLFEDYKMNHF 155 Query: 126 PEIYPGISEQRSRQIIQDFF 145 EI G+ + Q I FF Sbjct: 156 LEIRGGVLAEECSQKISRFF 175 >gi|86738996|ref|YP_479396.1| tRNA-adenosine deaminase [Frankia sp. CcI3] gi|86565858|gb|ABD09667.1| tRNA-adenosine deaminase [Frankia sp. CcI3] Length = 176 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 76/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRIL 66 M AL EA+ A ++PVGA+ V + + G+ RE D TAHAE++A+R R Sbjct: 29 MGLALREARLAPDHADVPVGALVVTEDGTVLGLGHNERERGADPTAHAEMIALRAAARRT 88 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP L VTLEPCTMCA A+ LAR+ RL YGA + K G + + +H P Sbjct: 89 GSWRLPGATLVVTLEPCTMCAGALVLARVDRLVYGAVDEKAGAVGSLWDVVRDRRLNHRP 148 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI ++ +FF RR Sbjct: 149 EVVAGIRADECGALLAEFFAARR 171 >gi|330950762|gb|EGH51022.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae Cit 7] Length = 167 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 60/147 (40%), Positives = 82/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K FM AL A AL E+PVGAV V N +II R N D +AHAE++AIR Sbjct: 11 KDQYFMREALALAAQGALLGEVPVGAVLVQNGEIIGRGYNCPISGSDPSAHAEMVAIRDA 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ A Sbjct: 71 AKTLDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAFL 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 131 NHRVLFEGGVLGEECGTMLSEFFRMRR 157 >gi|324998977|ref|ZP_08120089.1| cytidine/deoxycytidylate deaminase [Pseudonocardia sp. P1] Length = 157 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 1/136 (0%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 ALE A+ AA +++P+GAV + + ++ A N L D TAHAE+LA+R R++ Sbjct: 13 ALEVARGAAASDDVPIGAVVLDADGTELAAACNAREALGDPTAHAEVLALRAAARVVGSW 72 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 L L VT+EPCTMCA AI LAR+ R+ +GA PK G + H PE+ Sbjct: 73 RLTGTTLAVTVEPCTMCAGAIGLARVERVVFGAWEPKTGAAGSLWDVLRDRRLSHRPEVV 132 Query: 130 PGISEQRSRQIIQDFF 145 G+ + ++Q+FF Sbjct: 133 GGVRAGEAAALLQEFF 148 >gi|238922727|ref|YP_002936240.1| cytidine and deoxycytidylate deaminase family protein [Eubacterium rectale ATCC 33656] gi|238874399|gb|ACR74106.1| cytidine and deoxycytidylate deaminase family protein [Eubacterium rectale ATCC 33656] Length = 162 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/149 (37%), Positives = 78/149 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+++A+ A +E+P+G V V +KII+R NR K+ AHAE+ AIR Sbjct: 6 MTQDEKYMKQAIKQAKKAYALDEVPIGCVIVAGDKIIARGYNRRNTDKNPLAHAELSAIR 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L E +YVTLEPC MCA AI ARI R+ GA NPK G + + Sbjct: 66 KASKKTGDWRLEECTMYVTLEPCQMCAGAIVQARIPRVVIGAMNPKAGCAGSIINLLQMQ 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI ++ FFKE R Sbjct: 126 QFNHQVQTDIGICGDECSTMLSTFFKELR 154 >gi|271970484|ref|YP_003344680.1| CMP/dCMP deaminase zinc-binding protein [Streptosporangium roseum DSM 43021] gi|270513659|gb|ACZ91937.1| CMP/dCMP deaminase zinc-binding protein [Streptosporangium roseum DSM 43021] Length = 154 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 1/128 (0%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV + + +++RAGN L D TAHAE+LA+R R + L L VTLE Sbjct: 23 EVPVGAVVLGPDGSVLARAGNDRESLNDPTAHAEVLALREAARARGEWRLTGCTLVVTLE 82 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PCTMCA A LAR+ R+ YGA++ KGG + +H PE+ G+ + ++ Sbjct: 83 PCTMCAGASVLARVDRIVYGATDAKGGAAGSLWDVVRDRRLNHRPEVVMGVLAEECAGVL 142 Query: 142 QDFFKERR 149 +FF RR Sbjct: 143 TEFFTVRR 150 >gi|229525486|ref|ZP_04414891.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae bv. albensis VL426] gi|229339067|gb|EEO04084.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae bv. albensis VL426] Length = 193 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 73/129 (56%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 + E+PVGAV V + +II+ N + D TAHAEI IR ++LS L + LYVTL Sbjct: 45 QGEVPVGAVLVRDGEIIAEGWNSSITNHDATAHAEIEVIRKAGKVLSNYRLLDTTLYVTL 104 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A+ +R++R+ YGA + K G ++ +H + G+ E+ R Sbjct: 105 EPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAAYHYATVEKGLLEEECRAQ 164 Query: 141 IQDFFKERR 149 +Q FF+ RR Sbjct: 165 LQAFFQRRR 173 >gi|51891149|ref|YP_073840.1| putative Cu-binding protein [Symbiobacterium thermophilum IAM 14863] gi|51854838|dbj|BAD38996.1| putative Cu-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 152 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 50/128 (39%), Positives = 74/128 (57%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+P+GAV V +++I+ R N D TAHAE+LAIR R+L L LYVT+E Sbjct: 21 GEVPIGAVIVRDSEILVRTHNLRETTHDATAHAEVLAIREAGRLLGGWRLTGCTLYVTIE 80 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA A+ +RI R+ +GA +PK + +F +H E+ G+ + ++I Sbjct: 81 PCPMCAGALLQSRIDRVVFGARDPKAWADRSILEFLQNPGLNHRVEVRDGVLAEACSEVI 140 Query: 142 QDFFKERR 149 + FF+ERR Sbjct: 141 RQFFRERR 148 >gi|291526516|emb|CBK92103.1| Cytosine/adenosine deaminases [Eubacterium rectale DSM 17629] gi|291527005|emb|CBK92591.1| Cytosine/adenosine deaminases [Eubacterium rectale M104/1] Length = 157 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/149 (37%), Positives = 78/149 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+++A+ A +E+P+G V V +KII+R NR K+ AHAE+ AIR Sbjct: 1 MTQDEKYMKQAIKQAKKAYALDEVPIGCVIVAGDKIIARGYNRRNTDKNPLAHAELSAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L E +YVTLEPC MCA AI ARI R+ GA NPK G + + Sbjct: 61 KASKKTGDWRLEECTMYVTLEPCQMCAGAIVQARIPRVVIGAMNPKAGCAGSIINLLQMQ 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI ++ FFKE R Sbjct: 121 QFNHQVQTDIGICGDECSTMLSTFFKELR 149 >gi|300113226|ref|YP_003759801.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii C-113] gi|299539163|gb|ADJ27480.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii C-113] Length = 188 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V ++I+ N +D TAHAEI AIR + L Sbjct: 46 WMYHALALARYAEETGEVPVGAVVVQEDEIVGEGWNCPINSRDPTAHAEIQAIRAASQQL 105 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA AI ARIRR+ +GA +PKGG + + +H Sbjct: 106 GNYRLVGTTLYVTLEPCAMCAGAIIQARIRRVVFGAFDPKGGAVGSALSILPGERLNHQV 165 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E G+ + I+ FF+ RR Sbjct: 166 ECQGGVLAEACGAILSAFFRARR 188 >gi|282883358|ref|ZP_06291951.1| tRNA-specific adenosine deaminase [Peptoniphilus lacrimalis 315-B] gi|281296769|gb|EFA89272.1| tRNA-specific adenosine deaminase [Peptoniphilus lacrimalis 315-B] Length = 157 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE A+ + ++PVG V V + KII + N+ + K+ HAEI AI C+ L Sbjct: 11 FMKKALELAKISYENFDVPVGCVIVKDKKIIGKGYNQKEKNKNPLCHAEINAINSACKNL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + D+YVTLEPC MC AI ARI+ LY+GA N + G + + + +H Sbjct: 71 NSYHLEDCDMYVTLEPCLMCVGAIINARIKNLYFGAYNYRFGAVLSHVELLKDGGFNHKT 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI ++ S +++ FF++ R Sbjct: 131 KYQGGILKEESARLLNSFFEKLR 153 >gi|226363496|ref|YP_002781278.1| tRNA-specific adenosine deaminase [Rhodococcus opacus B4] gi|226241985|dbj|BAH52333.1| putative tRNA-specific adenosine deaminase [Rhodococcus opacus B4] Length = 152 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 53/129 (41%), Positives = 73/129 (56%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80 ++PVGAV + + +SRA N + D TAHAEI+A+R R+ L L VTL Sbjct: 24 DVPVGAVVFDADGVEVSRAVNSREAMADPTAHAEIIALRAAARVYGDGWRLEGATLAVTL 83 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ LARI R+ +GA PK G + + H P++ G+ E I Sbjct: 84 EPCTMCAGALVLARISRVVFGAWEPKTGAVGSLWDVVRDRRLTHRPQVRGGVLEDECAGI 143 Query: 141 IQDFFKERR 149 ++DFF+ERR Sbjct: 144 LEDFFRERR 152 >gi|288549944|ref|ZP_05968716.2| tRNA-specific adenosine deaminase [Enterobacter cancerogenus ATCC 35316] gi|288317287|gb|EFC56225.1| tRNA-specific adenosine deaminase [Enterobacter cancerogenus ATCC 35316] Length = 168 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL AQ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 11 WMRHALTLAQRAWEEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MC+ A+ +RI L +GA + K G + +H Sbjct: 71 QNYRLLDTTLYVTLEPCVMCSGAMVHSRIGTLVFGARDEKTGAAGSLMDVLGHPGMNHQV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ ++ DFF+ RR Sbjct: 131 KIIGGVLAPECSGLLSDFFRMRR 153 >gi|225023945|ref|ZP_03713137.1| hypothetical protein EIKCOROL_00812 [Eikenella corrodens ATCC 23834] gi|224942970|gb|EEG24179.1| hypothetical protein EIKCOROL_00812 [Eikenella corrodens ATCC 23834] Length = 254 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 75/143 (52%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+ A+ A E+PVGAV V +II R N V HAEI A+ R L Sbjct: 110 WMQQALQLAEQALAAGEVPVGAVVVRRGEIIGRGANACVTEHSVCRHAEIAALTEAGRRL 169 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L DLYVTLEPC+MCA AI +RIRRL Y A+ PK G + + + Sbjct: 170 GNYRLDGCDLYVTLEPCSMCAGAIMQSRIRRLIYAAAEPKTGAAGSMLDLFANKQLNPHT 229 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ S Q++Q FF+ERR Sbjct: 230 AVQGGVLAAESAQLLQRFFQERR 252 >gi|170755371|ref|YP_001779653.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum B1 str. Okra] gi|169120583|gb|ACA44419.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum B1 str. Okra] Length = 145 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 58/145 (40%), Positives = 81/145 (55%), Gaps = 1/145 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N ++ A+ EA+ A E+PVGA+ V NKII+++ N LKD TAHAEILAI+ C Sbjct: 2 NDYIEYAIIEAEKALAIGEVPVGAIIVKENKIIAKSHNLKESLKDPTAHAEILAIKEACN 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L +YVTLEPC MCA+AI +RI L+ G +P GG + + + Sbjct: 62 TIHNWRLKGCKMYVTLEPCAMCASAIIQSRISELHIGTFDPVGGACGSVVNITNNSYLKN 121 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + I ++ SR II +FFK R Sbjct: 122 NLNIKWLYDDECSR-IITNFFKNIR 145 >gi|237800069|ref|ZP_04588530.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806398|ref|ZP_04593102.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022924|gb|EGI02981.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027511|gb|EGI07566.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. oryzae str. 1_6] Length = 168 Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 74/127 (58%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V N +II R N D +AHAE++AIR + L LP LYVTLEP Sbjct: 31 EVPVGAVVVHNGEIIGRGYNCPISGSDPSAHAEMVAIRESAKALDNYRLPGSTLYVTLEP 90 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C+MCA I +R+ R+ YGA PK G +++ QF++ A +H G+ + ++ Sbjct: 91 CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAFLNHRVLFEGGVLGEECGAMLS 150 Query: 143 DFFKERR 149 +FF+ RR Sbjct: 151 EFFRMRR 157 >gi|330807694|ref|YP_004352156.1| deaminase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375802|gb|AEA67152.1| putative deaminase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 165 Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 74/127 (58%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V + +II R N D +AHAE++AIR + +S LP LYVTLEP Sbjct: 34 EVPVGAVLVQDGEIIGRGFNCPISGHDPSAHAEMVAIRAAAQAVSNYRLPGSTLYVTLEP 93 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C+MCA I +RI R+ YGA PK G +++ QF++ +H G+ + ++ Sbjct: 94 CSMCAGLIVHSRIARVVYGALEPKAGIVQSQGQFFSQGFLNHRVMYEGGVLAEECSTVLS 153 Query: 143 DFFKERR 149 +FFK RR Sbjct: 154 EFFKARR 160 >gi|148378037|ref|YP_001252578.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum A str. ATCC 3502] gi|153931005|ref|YP_001382436.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum A str. ATCC 19397] gi|153937691|ref|YP_001385989.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum A str. Hall] gi|153941479|ref|YP_001389392.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum F str. Langeland] gi|168181142|ref|ZP_02615806.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum NCTC 2916] gi|226947243|ref|YP_002802334.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum A2 str. Kyoto] gi|148287521|emb|CAL81583.1| putative cytosine deaminase [Clostridium botulinum A str. ATCC 3502] gi|152927049|gb|ABS32549.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum A str. ATCC 19397] gi|152933605|gb|ABS39104.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum A str. Hall] gi|152937375|gb|ABS42873.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum F str. Langeland] gi|182668031|gb|EDT80010.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum NCTC 2916] gi|226841341|gb|ACO84007.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum A2 str. Kyoto] gi|295317500|gb|ADF97877.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum F str. 230613] gi|322804299|emb|CBZ01849.1| tRNA-specific adenosine-34 deaminase [Clostridium botulinum H04402 065] Length = 145 Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 58/145 (40%), Positives = 81/145 (55%), Gaps = 1/145 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N ++ A+ EA+ A E+PVGA+ V NKII+++ N LKD TAHAEILAI+ C Sbjct: 2 NDYIEYAIIEAKKALAIGEVPVGAIIVKENKIIAKSHNLKESLKDPTAHAEILAIKEACN 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L +YVTLEPC MCA+AI +RI L+ G +P GG + + + Sbjct: 62 TIHNWRLKGCKMYVTLEPCAMCASAIIQSRISELHIGTFDPVGGACGSVVNITNNSYLKN 121 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + I ++ SR II +FFK R Sbjct: 122 NLNIKWLYDDECSR-IITNFFKNIR 145 >gi|313677068|ref|YP_004055064.1| cmp/dcmp deaminase zinc-binding protein [Marivirga tractuosa DSM 4126] gi|312943766|gb|ADR22956.1| CMP/dCMP deaminase zinc-binding protein [Marivirga tractuosa DSM 4126] Length = 152 Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 79/143 (55%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ A EIPVGAV V KII++A N+ L DVTAHAE+LAI L Sbjct: 11 FMREALRQAEIAYEEGEIPVGAVVVCQKKIIAKAYNQTERLNDVTAHAEMLAITSAANHL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYV+LEPC MCA A++ ++I + Y ++ K G + H Sbjct: 71 GGKYLTDCTLYVSLEPCGMCAGALNWSQISEIVYALADEKRGFTKINPNM-----IHPKT 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ S+++I DFF + R Sbjct: 126 KVKSGLMAAESKKLIDDFFAKMR 148 >gi|110833682|ref|YP_692541.1| cytidine/deoxycytidylate deaminase family protein [Alcanivorax borkumensis SK2] gi|110646793|emb|CAL16269.1| cytidine/deoxycytidylate deaminase family protein [Alcanivorax borkumensis SK2] Length = 152 Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ AA + E+PVGA+ V +++ + N+ D +AHAEI+A+R Sbjct: 6 WMQQALMLARQAADQGEVPVGALVVRGGQLLGQGYNQPITANDPSAHAEIIAMRSASLAE 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMC A+ ARI RL YGAS P+ G E+ Q ++ +H Sbjct: 66 KNYRLSGCTLYVTLEPCTMCFGAMVHARIGRLVYGASEPRAGVCESQLQLPSVDFYNHRV 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + S +++ FF +RR Sbjct: 126 EVEKGVLAEESAMLLKRFFADRR 148 >gi|331092011|ref|ZP_08340842.1| hypothetical protein HMPREF9477_01485 [Lachnospiraceae bacterium 2_1_46FAA] gi|330402212|gb|EGG81783.1| hypothetical protein HMPREF9477_01485 [Lachnospiraceae bacterium 2_1_46FAA] Length = 155 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+++A+ A NE+P+G V V +KIISR NR K+ AHAE++AI+ Sbjct: 1 MNQDEKYMREAIKQAKKAYEINEVPIGCVIVCEDKIISRGYNRRTTDKNPLAHAEMIAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L + +YVTLEPC MC+ AI +R++++ G N K G + + Sbjct: 61 KASKKVGDWRLEDCTMYVTLEPCQMCSGAIVQSRMKKVVVGCMNAKAGCAGSILNLLQMD 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++++FFKE R Sbjct: 121 EFNHQVELETGVLEEECSLLMKNFFKELR 149 >gi|91225086|ref|ZP_01260308.1| YfhC protein [Vibrio alginolyticus 12G01] gi|91190029|gb|EAS76300.1| YfhC protein [Vibrio alginolyticus 12G01] Length = 169 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+E A+ A E+PVGAV V + +II+ NR+ D TAHAEI +R + L Sbjct: 1 MRRAMELAEQAEAEGEVPVGAVLVKDGEIIAEGRNRSIGTHDATAHAEIQTLRKAGQKLE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +R++R+ +GA + K G + +H Sbjct: 61 NYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAAYHYAL 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ E R +Q FFK RR Sbjct: 121 VEKGLLEDECRTQLQAFFKRRR 142 >gi|262395051|ref|YP_003286905.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. Ex25] gi|262338645|gb|ACY52440.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. Ex25] Length = 182 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 77/144 (53%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FM A+ A+ A E+PVGAV V + +II+ NR+ D TAHAEI +R + Sbjct: 12 LFMRRAMVLAEQAEAEGEVPVGAVLVKDGEIIAEGWNRSIGTNDATAHAEIQTLRKAGQK 71 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L + LYVTLEPC MCA A+ +R++R+ +GA + K G + +H Sbjct: 72 IENYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAAYHY 131 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G+ E R +Q FFK RR Sbjct: 132 ALVEKGLLEDECRTQLQAFFKRRR 155 >gi|195977341|ref|YP_002122585.1| tRNA-specific adenosine-34 deaminase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974046|gb|ACG61572.1| tRNA-specific adenosine-34 deaminase [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 164 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ + L++EIP+G V V II R N E HAEI+AI Sbjct: 11 FMREALKEAKKSLLKDEIPIGCVIVKAGHIIGRGHNAREERNQAIMHAEIMAISEANVHE 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LARI + YGASN K GG + Q T +H Sbjct: 71 GNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGASNQKFGGAGSLYQILTDERLNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ +++Q FF+++R Sbjct: 131 QLETGLLADDCAKLMQTFFQQKR 153 >gi|300813981|ref|ZP_07094274.1| cytidine and deoxycytidylate deaminase zinc-binding region [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511875|gb|EFK39082.1| cytidine and deoxycytidylate deaminase zinc-binding region [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 157 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE A+ + ++PVG V V + KII + N+ + K+ HAEI AI C+ L Sbjct: 11 FMKKALELAKISYKNFDVPVGCVIVKDKKIIGQGYNQKEKKKNPLCHAEINAINSACKNL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + D+YVTLEPC MC AI ARI+ LY+GA N + G + + + +H Sbjct: 71 NSYHLEDCDMYVTLEPCLMCVGAIINARIKNLYFGAYNYRFGAVLSHVELLKDGGFNHKT 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 GI ++ S +++ FF++ R Sbjct: 131 NYQGGILKEESARLLNSFFEKLR 153 >gi|224824536|ref|ZP_03697643.1| CMP/dCMP deaminase zinc-binding [Lutiella nitroferrum 2002] gi|224603029|gb|EEG09205.1| CMP/dCMP deaminase zinc-binding [Lutiella nitroferrum 2002] Length = 242 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A+ A+ AA E+PVGAV V +II R NR D +AHAE++A+R L Sbjct: 97 FMAEAIRLAKAAAAEGEVPVGAVVVKEGRIIGRGFNRPVTSHDPSAHAEMVALREAAATL 156 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L DLYVTLEPC MC AI +R+ R+ YGA +PK G + + +H Sbjct: 157 GNYRLSGCDLYVTLEPCPMCGGAILHSRLDRVIYGARDPKIGAAGSVLNLFGERALNHQT 216 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI + +++ +FF++RR Sbjct: 217 ALFSGIEAEACGRLLSEFFRQRR 239 >gi|313673213|ref|YP_004051324.1| cmp/dcmp deaminase zinc-binding protein [Calditerrivibrio nitroreducens DSM 19672] gi|312939969|gb|ADR19161.1| CMP/dCMP deaminase zinc-binding protein [Calditerrivibrio nitroreducens DSM 19672] Length = 154 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 84/144 (58%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FM ++ A+ A +++P+GA+ V++ KII+ NR + K+ HAEI+A++ R Sbjct: 7 LFMKKTIQVAKRALKYDDVPIGAIVVMDGKIIASGYNRKKTTKNPLDHAEIIAMKKAARK 66 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L LY TLEPC MCA AI RI+R+ +G PK GG+ + + + + T +H Sbjct: 67 IGDWRLNNCVLYSTLEPCIMCAGAILHYRIKRVVFGTLEPKFGGVVSNDRIFDIKTLNHR 126 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E G E+ + +++DFFK+ R Sbjct: 127 VEYEFGFFEEEIKGMMRDFFKKVR 150 >gi|307132102|ref|YP_003884118.1| tRNA-specific adenosine-34 deaminase [Dickeya dadantii 3937] gi|306529631|gb|ADM99561.1| tRNA-specific adenosine-34 deaminase [Dickeya dadantii 3937] Length = 167 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL AQ A E+PVGAV V +KII NR D TAHAEI+A++ G + L Sbjct: 10 WMRHALTLAQRAWDAGEVPVGAVLVRGDKIIGEGWNRPISRNDPTAHAEIMALQQGGQAL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LY+TLEPC MCA A+ +RI RL YGA++ K G + +H Sbjct: 70 QNYRLLDTTLYITLEPCVMCAGAMIHSRINRLVYGAADAKTGAAGSLVDILRHPGMNHHI 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I G+ +++ FF+ RR Sbjct: 130 VITDGVLADECSELLSRFFRMRR 152 >gi|68304978|gb|AAY89989.1| unknown [uncultured bacterium BAC13K9BAC] Length = 157 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 2/147 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMG 62 ++F A A A ++E+PVGAV + ++ ++IS N+ ++ + HAE+LA++ Sbjct: 6 HLFYELAYNLALVAYNQDEVPVGAVIIKDSTFEVISSGYNKMKQNRSSIDHAEMLALKTA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L+ E L + TLEPC MCA AIS AR+ + + A + K GG+ NG Y ++C Sbjct: 66 MTRLNNERLKGCSMITTLEPCPMCAQAISFARLSSIIFSAEDKKSGGVINGPVIYNSSSC 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 HH P I RS ++++ FF+ +R Sbjct: 126 HHKPSIIRFNDNGRSTKLLKKFFQNKR 152 >gi|258545205|ref|ZP_05705439.1| tRNA-specific adenosine deaminase [Cardiobacterium hominis ATCC 15826] gi|258519557|gb|EEV88416.1| tRNA-specific adenosine deaminase [Cardiobacterium hominis ATCC 15826] Length = 151 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 58/132 (43%), Positives = 78/132 (59%), Gaps = 7/132 (5%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+P+GA+ V N +II+ A NR D TAHAEILA+R G + L + V LYVTLE Sbjct: 21 GEVPIGAILVANGEIIASAHNRTVSDHDPTAHAEILALRAGGQALGNHRMRGVSLYVTLE 80 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC----HHSPEIYPGISEQRS 137 PC MC A+ ARI RL +GA + + G G+ F LA HH EI G+ E+ Sbjct: 81 PCIMCTGALIQARIDRLVFGAYDSRIGAC--GSAF-DLARHRRLNHHIHEIKGGVLEEAC 137 Query: 138 RQIIQDFFKERR 149 R+ +Q FF+++R Sbjct: 138 REQLQRFFQQKR 149 >gi|254521455|ref|ZP_05133510.1| tRNA-specific adenosine deaminase [Stenotrophomonas sp. SKA14] gi|219719046|gb|EED37571.1| tRNA-specific adenosine deaminase [Stenotrophomonas sp. SKA14] Length = 174 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 58/145 (40%), Positives = 84/145 (57%), Gaps = 2/145 (1%) Query: 7 FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL A+ A +EIPVGAV V + +++ N N D +AHAEI+A+R+G + Sbjct: 16 WMRHALALAERAQREFDEIPVGAVLVGADGQLLGEGWNLNIASHDPSAHAEIVAMRVGGK 75 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 +LS L LYVTLEPC MCA AI AR+ RL YGAS+PK G + A +H Sbjct: 76 VLSNHRLLGSTLYVTLEPCAMCAMAIVHARVSRLVYGASDPKTGACGSVFDLLGDARHNH 135 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 EI+ G+ + + + ++F+ +R Sbjct: 136 RVEIHGGVLAKEASTRLTNYFRAKR 160 >gi|188533151|ref|YP_001906948.1| tRNA-specific adenosine deaminase [Erwinia tasmaniensis Et1/99] gi|188028193|emb|CAO96051.1| tRNA-specific adenosine deaminase [Erwinia tasmaniensis Et1/99] Length = 186 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+ A+ A E+PVGAV VL+ ++I NR D TAHAE++A+R G +++ Sbjct: 29 WMRHALQLARRAWNEGEVPVGAVLVLDGQVIGEGWNRPIGHHDPTAHAEMMALRQGGKVI 88 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ R+ RL YGA + K G + +H Sbjct: 89 ENYRLMDTTLYVTLEPCVMCAGAMVHGRVGRLVYGARDAKTGAAGSLLDVLGHPGMNHRV 148 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ +FF++RR Sbjct: 149 RVDCGVLADECAAMLSEFFRQRR 171 >gi|91776192|ref|YP_545948.1| tRNA-adenosine deaminase [Methylobacillus flagellatus KT] gi|91710179|gb|ABE50107.1| tRNA-adenosine deaminase [Methylobacillus flagellatus KT] Length = 168 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 72/143 (50%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+ AQ AAL E+PVGAV V + +I R N D +AHAEI A+R L Sbjct: 15 FMRIALQLAQEAALAGEVPVGAVVVKDGVVIGRGSNAPIAYHDPSAHAEIRAMRDAAARL 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA AI ARI RL +GA + K G + +H Sbjct: 75 GNYRLTGCALYVTLEPCAMCAGAIQHARIARLVFGAHDYKTGACGSVIDLMAEERLNHHT 134 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ Q + FF ERR Sbjct: 135 LVKSGVLVQECSATLTQFFAERR 157 >gi|326624390|gb|EGE30735.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 161 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 55/142 (38%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G +L Sbjct: 1 MRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVLQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H + Sbjct: 61 NYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRVD 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I G+ ++ DFF+ RR Sbjct: 121 IIEGVLRDECATLLSDFFRMRR 142 >gi|284006748|emb|CBA72005.1| tRNA-specific adenosine deaminase [Arsenophonus nasoniae] Length = 164 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 58/148 (39%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 KK +M A+ A+ A + EIPVGAV V +K+I+ N+ D AHAEI+A+R Sbjct: 5 KKDVYWMRKAILLAEKAQAKGEIPVGAVLVHEDKLIAEGWNQPISDHDPCAHAEIIALRA 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G + L L LYVTLEPC MCA A+ ARI RL YGA + K G + + Sbjct: 65 GGQYLQNYRLLNTTLYVTLEPCIMCAGAMIHARISRLVYGACDQKTGAAGSIIDVFNHPD 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI ++ FFK+RR Sbjct: 125 MNHRILVLGGILSDECSAMLSRFFKQRR 152 >gi|262375359|ref|ZP_06068592.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] gi|262309613|gb|EEY90743.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] Length = 171 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 81/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A E+A AA + EIPVGA+ V N+II + N L D TAHAEI+A+R C+ + Sbjct: 11 WMQRAYEQAALAAAQGEIPVGAIIVSQNQIIGQGFNAPISLNDPTAHAEIVALRDACQNI 70 Query: 67 SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 LP+ LYVTLEPCTMC A+ +R+ R+ +GA K G + + Q + +H Sbjct: 71 QNYRLPDDAVLYVTLEPCTMCVGALVHSRVSRVVFGAFEAKAGSLVSARQLFETGYYNHV 130 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 G +Q+ + + FFK RR Sbjct: 131 FPFQAGCMQQQCSEQLSAFFKLRR 154 >gi|293376812|ref|ZP_06623032.1| cytidine and deoxycytidylate deaminase zinc-binding region [Turicibacter sanguinis PC909] gi|325845379|ref|ZP_08168678.1| cytidine and deoxycytidylate deaminase zinc-binding region [Turicibacter sp. HGF1] gi|292644564|gb|EFF62654.1| cytidine and deoxycytidylate deaminase zinc-binding region [Turicibacter sanguinis PC909] gi|325488594|gb|EGC91004.1| cytidine and deoxycytidylate deaminase zinc-binding region [Turicibacter sp. HGF1] Length = 162 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 79/144 (54%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+EEA+ A E+P+GAV V + +II+R N + AHAE++AI + Sbjct: 5 TYMQAAIEEAKKAQNLGEVPIGAVIVKDGEIIARGYNLRETSQLSNAHAEMIAIAKANEM 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L + LYVTLEPC MCA AI +RI + +GA +PKGG + +H Sbjct: 65 VGSWRLEDCTLYVTLEPCPMCAGAIVQSRIPTVVFGAHDPKGGCCGTIYNLLDESKFNHR 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ Q++ DFF+ R Sbjct: 125 CELVSGVLEEECGQLLSDFFRNLR 148 >gi|268593242|ref|ZP_06127463.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131] gi|291311137|gb|EFE51590.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131] Length = 160 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 81/143 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+E A A EIPVGAV V +N +++ NR+ + TAHAEI+A++ + L Sbjct: 10 WMQQAIELALKAQDLGEIPVGAVLVKDNHLVASGWNRSIIDHNPTAHAEIMALQQAGQEL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S L + LYVTLEPC MCA A+ +RI R+ YGA + K G + A +H Sbjct: 70 SNYRLLDTTLYVTLEPCIMCAGAMIHSRISRVVYGAKDFKTGACGSYLDIMGQAGLNHYV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ EQ+ ++ FFK RR Sbjct: 130 DVTGGVLEQQCSSMLSAFFKLRR 152 >gi|294669183|ref|ZP_06734263.1| tRNA-specific adenosine deaminase [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308815|gb|EFE50058.1| tRNA-specific adenosine deaminase [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 246 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ AA E+PVGAV V N +++S A NR D+ +HAE+ A+ R Sbjct: 95 FMQLALHQAEAAAAAGEVPVGAVVVRNGEVLSTAHNRCVADCDIGSHAELRALAEAGRQT 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ AR+ R+ YGA+ PK G + ++ + Sbjct: 155 GSYRLDGCDVYITLEPCAMCASALIQARVARVVYGAAEPKSGAAGSVVDLFSDGRLNKHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI + + ++Q FF++RR Sbjct: 215 AVFGGILAEDCQAVLQHFFRQRR 237 >gi|205371946|ref|ZP_03224765.1| hypothetical protein Bcoam_00240 [Bacillus coahuilensis m4-4] Length = 160 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA A E+P+GAV V + ++I+ N ++ HAE++AI+ C L Sbjct: 6 FMKLAIEEALKAKEILEVPIGAVIVKDGEVIATGHNLRETTQNAITHAEVIAIQKACEKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +LYVTLEPC MC+ AI +RI ++ YGA +PK G + + +H Sbjct: 66 GTWRLEGAELYVTLEPCPMCSGAIVQSRIEKVIYGAKDPKAGCAGSLMNLLQDSRFNHQC 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI E +++ FF+E R Sbjct: 126 EVEHGILEVECGELLSSFFRELR 148 >gi|168184980|ref|ZP_02619644.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum Bf] gi|237793341|ref|YP_002860893.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum Ba4 str. 657] gi|182671972|gb|EDT83933.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum Bf] gi|229261589|gb|ACQ52622.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum Ba4 str. 657] Length = 148 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 59/148 (39%), Positives = 81/148 (54%), Gaps = 7/148 (4%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N ++ A+ EA+ A E+PVGA+ V NKII+++ N LKD TAHAEILAI+ C Sbjct: 2 NDYIEYAIIEAKKALAIGEVPVGAIIVKENKIIAKSHNLKESLKDPTAHAEILAIKEACN 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFYTLAT 121 + L +YVTLEPC MCA+AI +RI L+ G +P GG + N T L + Sbjct: 62 TIHNWRLKGCKMYVTLEPCAMCASAIIQSRISELHIGTFDPVGGACGSVVNITNNSYLKS 121 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +Y + +II +FFK R Sbjct: 122 NLSIKWLY----DDECSKIITNFFKNIR 145 >gi|318606786|emb|CBY28284.1| tRNA-specific adenosine-34 deaminase [Yersinia enterocolitica subsp. palearctica Y11] Length = 183 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 72/127 (56%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGA+ VL+N++I NR D TAHAEI+A+R G +++ L + LYVTLEP Sbjct: 38 EVPVGAILVLDNQVIGEGWNRPIRDNDPTAHAEIMALRQGGQVVQNYRLIDATLYVTLEP 97 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCA A+ +RIRRL YGA++ K G + +H EI G+ + Sbjct: 98 CVMCAGAMVHSRIRRLVYGANDLKTGAAGSLVDILRHPGMNHQIEITAGVMADVCAHQLS 157 Query: 143 DFFKERR 149 FF+ RR Sbjct: 158 AFFRVRR 164 >gi|258405729|ref|YP_003198471.1| CMP/dCMP deaminase zinc-binding [Desulfohalobium retbaense DSM 5692] gi|257797956|gb|ACV68893.1| CMP/dCMP deaminase zinc-binding protein [Desulfohalobium retbaense DSM 5692] Length = 165 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 82/144 (56%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA+ A E+P+GAV V +K +++R GNR D TAHAEI+A+R C+ + Sbjct: 19 MELALDEARAAQTHGEVPIGAVLVDPDKRVLARGGNRTITDSDPTAHAEIVALRRACQSV 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP L VTLEPC MC A+ AR+ + + A +PK G I + + L +H Sbjct: 79 GNYRLPGAILAVTLEPCLMCLGALIQARLAGVVFAARDPKAGAIVSQLEGPHLPWLNHRF 138 Query: 127 EIYPGISE-QRSRQIIQDFFKERR 149 + + SR ++QDFF++RR Sbjct: 139 WVRETTAHAATSRALLQDFFRQRR 162 >gi|116333248|ref|YP_794775.1| cytosine/adenosine deaminase [Lactobacillus brevis ATCC 367] gi|116098595|gb|ABJ63744.1| tRNA-adenosine deaminase [Lactobacillus brevis ATCC 367] Length = 183 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 52/139 (37%), Positives = 79/139 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA+ AA+ E+P+G+V V + +II R N D T HAEI AI C L Sbjct: 13 YMEEALFEAEQAAVIGEVPIGSVIVHDGQIIGRGHNLREHGHDATLHAEIRAIEEACATL 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVT+EPC MC+ AI ARI ++YGA +PK G +++ T + +H+ Sbjct: 73 QSWRLNDCQLYVTIEPCLMCSGAIINARIPEVFYGARDPKAGAVDSLYATLTDSRLNHTV 132 Query: 127 EIYPGISEQRSRQIIQDFF 145 ++ G+ + + + + FF Sbjct: 133 AVHEGLLAKDAGERMVAFF 151 >gi|15598962|ref|NP_252456.1| hypothetical protein PA3767 [Pseudomonas aeruginosa PAO1] gi|116051766|ref|YP_789395.1| hypothetical protein PA14_15680 [Pseudomonas aeruginosa UCBPP-PA14] gi|218889954|ref|YP_002438818.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa LESB58] gi|254236673|ref|ZP_04929996.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|254242457|ref|ZP_04935779.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|296387724|ref|ZP_06877199.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa PAb1] gi|313109181|ref|ZP_07795150.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa 39016] gi|9949937|gb|AAG07154.1|AE004795_6 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|115586987|gb|ABJ13002.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa UCBPP-PA14] gi|126168604|gb|EAZ54115.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126195835|gb|EAZ59898.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|218770177|emb|CAW25939.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa LESB58] gi|310881652|gb|EFQ40246.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa 39016] Length = 182 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 52/126 (41%), Positives = 70/126 (55%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +II R NR D +AHAE+LAIRM LP LYVTLEPC Sbjct: 48 VPVGAVLVREGEIIGRGFNRPISSHDPSAHAEMLAIRMAAAEAGNYRLPGSTLYVTLEPC 107 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 +MC+ + ARI+RL YG PK G +E+ +F+ +H + G+ + Q + Sbjct: 108 SMCSGLLVHARIQRLVYGTVEPKSGAVESRGRFFEQEHLNHRVMVEGGVLAEECSQALSA 167 Query: 144 FFKERR 149 FF+ RR Sbjct: 168 FFRARR 173 >gi|224541628|ref|ZP_03682167.1| hypothetical protein CATMIT_00799 [Catenibacterium mitsuokai DSM 15897] gi|224525466|gb|EEF94571.1| hypothetical protein CATMIT_00799 [Catenibacterium mitsuokai DSM 15897] Length = 147 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 11/147 (7%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ AL+EA+ A +E+P+G + V +II+R N+ LK T HAEILAI L Sbjct: 6 YMAEALKEAEIAMSEDEVPIGCIIVYEGQIIARTHNQKETLKKATGHAEILAINQASEYL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTLATC 122 L +YVTLEPC MC AI +R+ RL GA+ K G IEN Sbjct: 66 DLWHLDGCTMYVTLEPCMMCTGAIIQSRMSRLVIGANVSKWPGFIELIENN-------PV 118 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P++ GI +++ I+ +FFK +R Sbjct: 119 NHHPDVQQGILKEQCATIVSEFFKRKR 145 >gi|116515096|ref|YP_802725.1| hypothetical protein BCc_160 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256950|gb|ABJ90632.1| tRNA-specific adenosine deaminase [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 153 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 56/146 (38%), Positives = 78/146 (53%), Gaps = 1/146 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N +M AL++A E+P+G++ + NN +IS A N L D +AHAEIL IR G + Sbjct: 6 NYWMKYALKQAYLGKKNGEVPIGSLLIKNNNLISSAWNSCINLFDASAHAEILVIRNGGK 65 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTLATCH 123 IL L LYVT EPC MC+ AI ARI ++ YG+ + K F Y H Sbjct: 66 ILKNYRLKNTILYVTHEPCFMCSEAIINARINKVVYGSYSFKKNCFSYYINFLYINNIKH 125 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H EI GI ++++FF+ +R Sbjct: 126 HIKEIKSGILLYECSNLLKNFFRRKR 151 >gi|303245260|ref|ZP_07331544.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio fructosovorans JJ] gi|302493109|gb|EFL52971.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio fructosovorans JJ] Length = 152 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ ALE+A+ AA + E PVGAV + +++ AGN D TAHAEILA+R + Sbjct: 1 MALALEKARGAAAQGEAPVGAVVLSAAGELLGAAGNAPITRHDPTAHAEILALRQAAAHV 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP + VTLEPC MC A+ AR+ L YGAS+P+ G I + L +H Sbjct: 61 GNYRLPGSIMAVTLEPCVMCLGAMIHARVGLLVYGASDPRTGAIASMLPGPDLPFFNHRF 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E +++DFF+ERR Sbjct: 121 DVLSGVLEATCGGLLRDFFRERR 143 >gi|49081784|gb|AAT50292.1| PA3767 [synthetic construct] Length = 183 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 52/126 (41%), Positives = 70/126 (55%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +II R NR D +AHAE+LAIRM LP LYVTLEPC Sbjct: 48 VPVGAVLVREGEIIGRGFNRPISSHDPSAHAEMLAIRMAAAEAGNYRLPGSTLYVTLEPC 107 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 +MC+ + ARI+RL YG PK G +E+ +F+ +H + G+ + Q + Sbjct: 108 SMCSGLLVHARIQRLVYGTVEPKSGAVESRGRFFEQEHLNHRVMVEGGVLAEECSQALSA 167 Query: 144 FFKERR 149 FF+ RR Sbjct: 168 FFRARR 173 >gi|308050412|ref|YP_003913978.1| tRNA-adenosine deaminase [Ferrimonas balearica DSM 9799] gi|307632602|gb|ADN76904.1| tRNA-adenosine deaminase [Ferrimonas balearica DSM 9799] Length = 170 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ +M+ A++ A+ A E+PVGAV V + ++I+ N++ L D +AHAE+L +R Sbjct: 1 MEQHQKWMAHAMKLAEQAEALGEVPVGAVLVRDGEVIAEGFNQSITLNDPSAHAEMLCLR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + LYVTLEPC+MCA A+ ARI L YGAS+ K G + Sbjct: 61 AAGQALENYRLLDTTLYVTLEPCSMCAGAMVHARIGTLVYGASDAKTGAAGSVMDLVRHP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + + FFK+RR Sbjct: 121 ALNHQLEVISGVLSEPCATQLSAFFKKRR 149 >gi|257783881|ref|YP_003179098.1| CMP/dCMP deaminase zinc-binding [Atopobium parvulum DSM 20469] gi|257472388|gb|ACV50507.1| CMP/dCMP deaminase zinc-binding [Atopobium parvulum DSM 20469] Length = 166 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALE+A+ AA E+P+GAV V ++++ A NR D +AHAE LA++ + L Sbjct: 19 YMKLALEQAELAAQIGEVPIGAVVVCGGEVVAVAHNRREIDNDPSAHAEFLAMQKASKKL 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +YVTLEPC MCA + ARI R +GA +PKGG + + +H Sbjct: 79 GRWRLSGCTVYVTLEPCLMCAGLMVNARIDRCVFGAFDPKGGATGTLFDVSSDSRLNHEF 138 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + + ++ FFKERR Sbjct: 139 AVLGGVLAEEASAQLKAFFKERR 161 >gi|193215821|ref|YP_001997020.1| CMP/dCMP deaminase [Chloroherpeton thalassium ATCC 35110] gi|193089298|gb|ACF14573.1| CMP/dCMP deaminase zinc-binding [Chloroherpeton thalassium ATCC 35110] Length = 161 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 80/144 (55%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A EA+ A +NE+PVGAV +N I+ R N+ L D TAHAE++A+ Sbjct: 11 LMEMAFREAEKAFEKNEVPVGAVVFDSNGAIVGRGFNQVEMLCDTTAHAEMIALTSAMNT 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L + L VT+EPC MCA A+ A++ RL +G+ + K G T +H Sbjct: 71 LGDKYLTDCTLAVTMEPCPMCAGAMVNAKLGRLIFGSYDAKMGAAGTVFNLTTSKFLNHQ 130 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ GI E+++ +I++ FF ++R Sbjct: 131 MEVIGGILEEKTTEILKSFFAQKR 154 >gi|332162680|ref|YP_004299257.1| tRNA-specific adenosine deaminase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325666910|gb|ADZ43554.1| tRNA-specific adenosine deaminase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860305|emb|CBX70619.1| tRNA-specific adenosine deaminase [Yersinia enterocolitica W22703] Length = 196 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 72/127 (56%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGA+ VL+N++I NR D TAHAEI+A+R G +++ L + LYVTLEP Sbjct: 51 EVPVGAILVLDNQVIGEGWNRPIRDNDPTAHAEIMALRQGGQVVQNYRLIDATLYVTLEP 110 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCA A+ +RIRRL YGA++ K G + +H EI G+ + Sbjct: 111 CVMCAGAMVHSRIRRLVYGANDLKTGAAGSLVDILRHPGMNHQIEITAGVMADVCAHQLS 170 Query: 143 DFFKERR 149 FF+ RR Sbjct: 171 AFFRVRR 177 >gi|226309631|ref|YP_002769525.1| tRNA specific adenosine deaminase [Brevibacillus brevis NBRC 100599] gi|226092579|dbj|BAH41021.1| putative tRNA specific adenosine deaminase [Brevibacillus brevis NBRC 100599] Length = 160 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 54/145 (37%), Positives = 78/145 (53%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + +M A+EEA+ AA E+P+GAV V + +I+ R N KD T HAE++AIR Sbjct: 8 DYYMKQAMEEARKAAAIGEVPIGAVIVRDGEIVGRGYNLRETQKDPTLHAELIAIREASE 67 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L LYVTLEPC MCA AI +RI ++ YGA +PK G +H Sbjct: 68 RLGGWRLIGCTLYVTLEPCPMCAGAIVQSRIEKVVYGARDPKAGCAGTLMNLLAEPRFNH 127 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + G+ + Q++++FF+ R Sbjct: 128 QVPVIEGVLAEECGQMLKEFFRGLR 152 >gi|90407089|ref|ZP_01215278.1| hypothetical protein PCNPT3_02575 [Psychromonas sp. CNPT3] gi|90311811|gb|EAS39907.1| hypothetical protein PCNPT3_02575 [Psychromonas sp. CNPT3] Length = 182 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 75/143 (52%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A A E+PVGAV V +N++I+ N + D AHAE++A+R L Sbjct: 25 WMQYALLLADKAEALGEVPVGAVLVKDNEVIAEGWNLSILSHDACAHAEVMAVREAGHKL 84 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ ARI+RL YGA + K G + + +H Sbjct: 85 QNYRLIDCTLYVTLEPCPMCAGALVHARIKRLVYGAPDLKTGAAGSVFNLLSHVKLNHQV 144 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I GI + I FFK RR Sbjct: 145 DITSGILSDQCSTKISQFFKRRR 167 >gi|187934949|ref|YP_001887626.1| tRNA-specific adenosine deaminase [Clostridium botulinum B str. Eklund 17B] gi|187723102|gb|ACD24323.1| tRNA-specific adenosine deaminase [Clostridium botulinum B str. Eklund 17B] Length = 152 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 49/103 (47%), Positives = 66/103 (64%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A EEA+ A + E+P+GAV V ++ +IS+A N LKD TAHAEILAIR + L Sbjct: 3 FLDIAKEEARIAMSKGEVPIGAVIVKDDIVISKAHNLKETLKDATAHAEILAIRKAAKFL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 L ++YVTLEPC+MCA+AI +RI +L+ G N G Sbjct: 63 GDWRLKGTEMYVTLEPCSMCASAIIQSRISKLHIGTFNKDMGA 105 >gi|319638138|ref|ZP_07992901.1| cytidine and deoxycytidylate deaminase [Neisseria mucosa C102] gi|317400411|gb|EFV81069.1| cytidine and deoxycytidylate deaminase [Neisseria mucosa C102] Length = 240 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E+A+ +A E+PVGAV V K I+ A N +V+ HAEI A+ + L Sbjct: 95 FMRLAIEQARQSAALGEVPVGAVIVYQGKAIAAAHNTCIGDHNVSHHAEINALAAAGKAL 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + D+Y+TLEPC MCA+A+ AR+ R+ YGA+ PK G + + + Sbjct: 155 QNYRLEDCDVYITLEPCAMCASALIQARVGRVIYGAAEPKTGAAGSVVDLFADKRLNKHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI + + ++QDFF +R Sbjct: 215 AILGGILVEECQSVLQDFFAAKR 237 >gi|28868664|ref|NP_791283.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213972056|ref|ZP_03400150.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. tomato T1] gi|301385879|ref|ZP_07234297.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. tomato Max13] gi|302063770|ref|ZP_07255311.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. tomato K40] gi|302132520|ref|ZP_07258510.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851903|gb|AAO54978.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213923189|gb|EEB56790.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. tomato T1] Length = 169 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 73/127 (57%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V N +II R N D +AHAE++AIR R L LP LYVTLEP Sbjct: 31 EVPVGAVVVHNGEIIGRGYNCPISGSDPSAHAEMVAIRDAARALGNYRLPGSTLYVTLEP 90 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C+MCA I +R+ R+ YGA PK G +++ QF++ +H G+ + ++ Sbjct: 91 CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRVLFEGGVLGEECGAMLS 150 Query: 143 DFFKERR 149 +FF+ RR Sbjct: 151 EFFRLRR 157 >gi|258625208|ref|ZP_05720121.1| zinc-binding domain protein [Vibrio mimicus VM603] gi|258582498|gb|EEW07334.1| zinc-binding domain protein [Vibrio mimicus VM603] Length = 157 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 77/142 (54%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR ++LS Sbjct: 1 MRRAIMLAAQAEEQGEVPVGAVLVRDGEIIAEGWNCSITHHDATAHAEIEVIRKAGKVLS 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +R++R+ YGA + K G + +H Sbjct: 61 NYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFNSQASYHYAT 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R +Q FF+ RR Sbjct: 121 VEKGLLEEECRAQLQAFFQRRR 142 >gi|116625482|ref|YP_827638.1| tRNA-adenosine deaminase [Candidatus Solibacter usitatus Ellin6076] gi|116228644|gb|ABJ87353.1| tRNA-adenosine deaminase [Candidatus Solibacter usitatus Ellin6076] Length = 142 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 56/142 (39%), Positives = 77/142 (54%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A++ A E+PVGAV L ++I R N D TAHAEILAIR ++ Sbjct: 1 MYQALALARSGAALGEVPVGAVIALAGEVIGRGSNAPVAQMDPTAHAEILAIREAASRIA 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L LY TLEPC MCA A+ ARI R+ +GA + + GG+ + Q +H E Sbjct: 61 NYRLTGATLYCTLEPCVMCAGALVAARIERVVFGARDLRFGGVRSKFQLADSDLLNHRVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I G+ Q++++FF+ RR Sbjct: 121 IVEGVLAVECVQLLREFFENRR 142 >gi|255037951|ref|YP_003088572.1| CMP/dCMP deaminase zinc-binding [Dyadobacter fermentans DSM 18053] gi|254950707|gb|ACT95407.1| CMP/dCMP deaminase zinc-binding [Dyadobacter fermentans DSM 18053] Length = 150 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 5/145 (3%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL A A EIPVGA+ V ++II R N+ L DVTAHAE++AI Sbjct: 10 HFFMEEALALAHKAYEEGEIPVGALVVAKDRIIGRGYNQTERLNDVTAHAEMIAITAAAD 69 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + L + LYVTLEPC MCA A+ +++R+ GA + K G G H Sbjct: 70 HLGSKYLTDCTLYVTLEPCVMCAGALYWTQVKRVVVGAMDEKRGFSRVGQPL-----LHP 124 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ GI S++++ FF++ R Sbjct: 125 KTKLVTGIMATESQELLLKFFRQLR 149 >gi|225016548|ref|ZP_03705740.1| hypothetical protein CLOSTMETH_00455 [Clostridium methylpentosum DSM 5476] gi|224950657|gb|EEG31866.1| hypothetical protein CLOSTMETH_00455 [Clostridium methylpentosum DSM 5476] Length = 254 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 57/138 (41%), Positives = 75/138 (54%), Gaps = 1/138 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALE+A AA E+PVGAV V +++++A NR K+ AHAE+LAI CR L Sbjct: 1 MRLALEQAARAAELGEVPVGAVLVRGGEVVAQAYNRRETDKNALAHAELLAIDQACRALG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L LYVTLEPC MC AI ARI + YGA + K G + T +H P+ Sbjct: 61 GWRLFGATLYVTLEPCPMCTGAIINARIDHVVYGAKDQKAGSCGSVIDL-TEYPYNHKPQ 119 Query: 128 IYPGISEQRSRQIIQDFF 145 + G+ EQ ++ FF Sbjct: 120 LTGGVLEQECAGMLSQFF 137 >gi|113477509|ref|YP_723570.1| tRNA-adenosine deaminase [Trichodesmium erythraeum IMS101] gi|110168557|gb|ABG53097.1| tRNA-adenosine deaminase [Trichodesmium erythraeum IMS101] Length = 156 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 75/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +MS LE A+ A E+PV A V + K+++ A NR D T HAEILA+R ++ Sbjct: 13 WMSRVLELAKTAGDAGEVPVAAAVVNSDGKLVTEAQNRRERDFDPTGHAEILALRQAGQV 72 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + LYV LEPC MC AI ARI L YGA +PK G + F +H Sbjct: 73 LQNWHLNQCTLYVNLEPCPMCTGAILQARIGLLVYGADDPKTGTVRTVANFPDSVFSNHR 132 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI E RQ +Q +F + R Sbjct: 133 LSVLGGIMEGACRQQLQSWFAKFR 156 >gi|313836522|gb|EFS74236.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL037PA2] gi|314928976|gb|EFS92807.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL044PA1] gi|314971034|gb|EFT15132.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL037PA3] Length = 156 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL+ A+ AA ++P+GAV + + ++S AGN D TAHAE+LAIR Sbjct: 8 MTQALDVARRAAAWGDVPIGAVVLGSDGDVLSEAGNERELTGDPTAHAEVLAIRRAAEAR 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPCTMCA AI ARI R+ +GA +PK G + + H Sbjct: 68 DGWRLGDCTLIVTLEPCTMCAGAIVAARIPRVVFGAFDPKAGAVSSLFDVMRDPRLPHRT 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + S ++++FF R Sbjct: 128 EVVTGVMVEESSALLREFFDGHR 150 >gi|301165417|emb|CBW24988.1| putative nucleotide deaminase [Bacteriovorax marinus SJ] Length = 158 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 MS A++EA A +E+P+GA V + I+S+ N D HAEI+AIR C+ Sbjct: 10 LMSVAMDEAYKAYSIDEVPIGAAIVDESGNILSQCHNEKEHCNDPCGHAEIIAIREACKK 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L +YVTLEPC MC +A+ AR+ +L + A +PKGG I Y +H+ Sbjct: 70 RGDWRLSGCTIYVTLEPCPMCLSAMIQARVDKLVFAAYDPKGGAISLNYNLYKDKRLNHN 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI S +++ FF+E+R Sbjct: 130 FSVVGGIGHFESSKVLSRFFREKR 153 >gi|330985033|gb|EGH83136.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 169 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 51/127 (40%), Positives = 72/127 (56%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V N +II R N D +AHAE++AIR L LP LYVTLEP Sbjct: 31 EVPVGAVVVQNGEIIGRGYNCPISASDPSAHAEMVAIRDAASALDNYRLPGSTLYVTLEP 90 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C+MCA I +R+ R+ YGA PK G +++ QF++ +H G+ + ++ Sbjct: 91 CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRVLFEGGVLSEECGAMLS 150 Query: 143 DFFKERR 149 +FF+ RR Sbjct: 151 EFFRMRR 157 >gi|328906579|gb|EGG26354.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium sp. P08] Length = 160 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL+ A+ AA ++P+GAV + + ++S AGN D TAHAE+LAIR Sbjct: 12 MTQALDVARRAAAWGDVPIGAVVLGSDGDVLSEAGNERELTGDPTAHAEVLAIRRAAEAR 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPCTMCA AI ARI R+ +GA +PK G + + H Sbjct: 72 DGWRLGDCTLIVTLEPCTMCAGAIVAARIPRVVFGAFDPKAGAVSSLFDVMRDPRLPHRT 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + S ++++FF R Sbjct: 132 EVVTGVMVEESSALLREFFDGHR 154 >gi|310639569|ref|YP_003944327.1| cmp/dcmp deaminase zinc-binding protein [Paenibacillus polymyxa SC2] gi|309244519|gb|ADO54086.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus polymyxa SC2] Length = 165 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A++EA A E+P+GAV V +N+II R N D TAHAE++AIR L Sbjct: 9 WMREAIQEAYKAEALGEVPIGAVIVKDNEIIGRGYNLRETDTDPTAHAEMVAIRQASEHL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI +R+ L YG ++PK G +H Sbjct: 69 GAWRLLDCRLYVTLEPCPMCAGAIVQSRVPHLIYGTTDPKAGCAGTLMNLLQEPRFNHCT 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ ++ ++ +FF++ R Sbjct: 129 EVTSGVLQEECASMLTNFFRQLR 151 >gi|291569301|dbj|BAI91573.1| putative cytidine/deoxycytidylate deaminase [Arthrospira platensis NIES-39] Length = 157 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 74/144 (51%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL+ A E+PVGA+ V K+I++ NR D TAHAEI+A+R ++ Sbjct: 11 WMQQALKLGAAAGEAGEVPVGALIVNQQGKLIAQGENRRERDPDPTAHAEIIALRQASQV 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LYVTLEPC MCA AI ARI L YG +PK G I +H Sbjct: 71 LGDWHLNTCTLYVTLEPCPMCAGAILQARIGLLVYGVDDPKTGSIRTVCNLPDSPASYHR 130 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI E RQ +Q +F + R Sbjct: 131 LPVLGGILESSCRQQLQSWFAQHR 154 >gi|229496208|ref|ZP_04389928.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas endodontalis ATCC 35406] gi|229316786|gb|EEN82699.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas endodontalis ATCC 35406] Length = 151 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 77/144 (53%), Gaps = 9/144 (6%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+EA A E+P+GAV V +I+ R NR +L+D TAHAEILAI L Sbjct: 15 MRAALDEAYLAKEAGEVPIGAVVVYQGRIVGRGRNRVEQLQDPTAHAEILAITAATENLG 74 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L + LYV+LEPC MC A+ A++ R+ Y S+PK G ++ LA P Sbjct: 75 AKYLTDCTLYVSLEPCVMCMGALRWAQVSRIVYATSDPKAG-------YHVLAPKAPHPR 127 Query: 128 --IYPGISEQRSRQIIQDFFKERR 149 I G + +++ FF ERR Sbjct: 128 AVIEVGPFGDEAAGLLRSFFSERR 151 >gi|119946930|ref|YP_944610.1| CMP/dCMP deaminase, zinc-binding [Psychromonas ingrahamii 37] gi|119865534|gb|ABM05011.1| CMP/dCMP deaminase, zinc-binding [Psychromonas ingrahamii 37] Length = 176 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ AL A A EIPVGAV V +NKI++ N + + AHAEI+AI+ + + Sbjct: 17 WMAYALSLADKAESFGEIPVGAVIVKDNKIVAEGWNLSIINHNACAHAEIMAIQSAGQKI 76 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ ARI+RL YGA + K G + +H Sbjct: 77 QNYRLIDCTLYVTLEPCAMCAGALVHARIKRLVYGAGDYKTGAAGSVFNLVQSEQLNHQL 136 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + S I FFK RR Sbjct: 137 EVTAGVFAEESATKISAFFKRRR 159 >gi|146283335|ref|YP_001173488.1| cytidine/deoxycytidylate deaminase [Pseudomonas stutzeri A1501] gi|145571540|gb|ABP80646.1| cytidine/deoxycytidylate deaminase [Pseudomonas stutzeri A1501] Length = 145 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 49/127 (38%), Positives = 74/127 (58%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V +I+ R N D +AHAE++AIR + L LP LYVTLEP Sbjct: 16 EVPVGAVLVHEGQIVGRGFNCPISRHDPSAHAEMVAIRAAAQALQNYRLPGSTLYVTLEP 75 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C+MCA I +R++R+ YGA+ PK G + + QF+ +H + G+ + ++ Sbjct: 76 CSMCAGLIVHSRVQRVVYGATEPKAGVVVSRGQFFDQGFLNHRVLVEGGVLAEECGAVLS 135 Query: 143 DFFKERR 149 +FF++RR Sbjct: 136 EFFRQRR 142 >gi|182416390|ref|YP_001821456.1| CMP/dCMP deaminase zinc-binding [Opitutus terrae PB90-1] gi|177843604|gb|ACB77856.1| CMP/dCMP deaminase zinc-binding [Opitutus terrae PB90-1] Length = 178 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +MS A +A +A +E+P+GAV L ++++ A N E +D TAHAE+LAI Sbjct: 19 RDDTFYMSLAFNQAIDAWRLDEVPIGAVIELGGEVVAAAHNTVEEARDPTAHAEMLAITQ 78 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L +YVT EPC MC+ A+ ++R++R+ Y +PK G + T L Sbjct: 79 AAAKLGDWRLEGATVYVTKEPCPMCSGAMLMSRVKRVCYAVRDPKMGCLGGATNLNDLPR 138 Query: 122 CHHSPEIYP-GISEQRSRQIIQDFFKERR 149 +H E+ G+ E R ++Q FFK +R Sbjct: 139 VNHHVELTAGGVLEDECRALLQAFFKLKR 167 >gi|301154746|emb|CBW14209.1| tRNA-specific adenosine deaminase [Haemophilus parainfluenzae T3T1] Length = 172 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 58/140 (41%), Positives = 78/140 (55%), Gaps = 1/140 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL A A EIPVGAV V + I+ N + D TAHAEI+A+R + Sbjct: 9 FMQHALMLADRAEALGEIPVGAVLVDDEGNILGEGWNLSIIEHDPTAHAEIVALRNAAQN 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L LYVTLEPCTMCA AI +RI+RL +GAS+ K G + + F+ +H+ Sbjct: 69 IQNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAVGSRFHFFDDYKMNHT 128 Query: 126 PEIYPGISEQRSRQIIQDFF 145 EI G+ ++ Q + DFF Sbjct: 129 LEITSGVLVEKCGQKLSDFF 148 >gi|325577729|ref|ZP_08148004.1| tRNA-specific adenosine deaminase [Haemophilus parainfluenzae ATCC 33392] gi|325160474|gb|EGC72600.1| tRNA-specific adenosine deaminase [Haemophilus parainfluenzae ATCC 33392] Length = 172 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 58/140 (41%), Positives = 78/140 (55%), Gaps = 1/140 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL A A EIPVGAV V + I+ N + D TAHAEI+A+R + Sbjct: 9 FMQHALMLADRAEALGEIPVGAVLVGDEGNILGEGWNLSIIENDPTAHAEIVALRNAAQN 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L LYVTLEPCTMCA AI +RI+RL +GAS+ K G + + F+ +H+ Sbjct: 69 IQNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAVGSRFHFFDDYKMNHA 128 Query: 126 PEIYPGISEQRSRQIIQDFF 145 EI G+ ++ Q + DFF Sbjct: 129 LEITSGVLAEKCGQKLSDFF 148 >gi|331019747|gb|EGH99803.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 169 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 73/127 (57%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V N +II R N D +AHAE++AIR R L LP LYVTLEP Sbjct: 31 EVPVGAVVVHNGEIIGRGYNCPISGSDPSAHAEMVAIRDAARALGNYRLPGSTLYVTLEP 90 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C+MCA I +R+ R+ YGA PK G +++ QF++ +H G+ + ++ Sbjct: 91 CSMCAGLIVHSRLARVVYGALEPKAGIVQSQGQFFSQGFLNHRVLFEGGVLGEECGAMLS 150 Query: 143 DFFKERR 149 +FF+ RR Sbjct: 151 EFFRLRR 157 >gi|291279752|ref|YP_003496587.1| CMP/dCMP deaminase zinc-binding protein [Deferribacter desulfuricans SSM1] gi|290754454|dbj|BAI80831.1| CMP/dCMP deaminase, zinc-binding protein [Deferribacter desulfuricans SSM1] Length = 151 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA + E+PVGAV V ++++IS N + K+ HAE++AI ++L Sbjct: 9 FMKLAIAEAYKSFEEGEVPVGAVVVRDDEVISYGRNIKGKNKNALLHAEMVAIHKSVKML 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LYVT EPC MCA AI RI+++ +GA PK GG+ + + + +H Sbjct: 69 DDWRLNECTLYVTCEPCVMCAGAILHCRIKKVIFGAFEPKFGGVVSNLRVFDTPFFNHKV 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ + +++++FFK+ R Sbjct: 129 RYEFGLFSEEISKMMKNFFKQFR 151 >gi|227486589|ref|ZP_03916905.1| nucleoside deaminase [Anaerococcus lactolyticus ATCC 51172] gi|227235407|gb|EEI85422.1| nucleoside deaminase [Anaerococcus lactolyticus ATCC 51172] Length = 158 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 56/149 (37%), Positives = 82/149 (55%), Gaps = 3/149 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM+ A+ EA+ A +E+P+GAV V ++I+ R N + K HAEI A++ Sbjct: 7 KADKFFMTEAINEAKLAKSIDEVPIGAVVVCGDRIVGRGHNFTYKGKSALNHAEIYALKE 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + L E +YVTLEPC MCA AI +R++RL +PK GG T F + Sbjct: 67 AGKNIGDFRLEECTMYVTLEPCLMCAGAIMHSRVKRLVIACKDPKRGGF--STSFIDKDS 124 Query: 122 CH-HSPEIYPGISEQRSRQIIQDFFKERR 149 H + PEI G+ E+ S + +Q FF+ R Sbjct: 125 PHLNVPEISYGLMEEESLKELQSFFRALR 153 >gi|212710654|ref|ZP_03318782.1| hypothetical protein PROVALCAL_01720 [Providencia alcalifaciens DSM 30120] gi|212686735|gb|EEB46263.1| hypothetical protein PROVALCAL_01720 [Providencia alcalifaciens DSM 30120] Length = 170 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALE A+ A EIPVGA+ V +N++++ N + E D TAHAEI+ ++ L Sbjct: 10 WMLQALELAKKAQNAGEIPVGALLVKDNQLVATGWNHSIENHDPTAHAEIVTLKQAGTAL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ YGA + K G + + +H Sbjct: 70 QNYRLLDTTLYVTLEPCIMCAGAMIHSRIGRVVYGAKDFKTGACGSFINIMSQPGLNHYV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E ++ +FFK RR Sbjct: 130 EVTSGVLEDACSSMLSEFFKMRR 152 >gi|194246540|ref|YP_002004179.1| Cytosine/adenosine deaminase [Candidatus Phytoplasma mali] gi|193806897|emb|CAP18326.1| Cytosine/adenosine deaminase [Candidatus Phytoplasma mali] Length = 151 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A +EA+ A +NE+PVGAVAVLNN+II+R N + + HAE L + + Sbjct: 8 FMKEAFKEAKKAYYKNEVPVGAVAVLNNQIIARTHNNCEKKQIFFGHAEFLLMMKLNKKF 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L ++++YVTLEPC MCA A+ +I ++YY +N K G I++ H Sbjct: 68 KNRRLNKINIYVTLEPCLMCAGALIQTQINKVYYSVNNYKSGSIDSVISLLKFKYPHKII 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ + ++ ++++FFK R Sbjct: 128 T-ESGLLAKENKILLKNFFKNLR 149 >gi|160931212|ref|ZP_02078614.1| hypothetical protein CLOLEP_00049 [Clostridium leptum DSM 753] gi|156869767|gb|EDO63139.1| hypothetical protein CLOLEP_00049 [Clostridium leptum DSM 753] Length = 163 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 53/128 (41%), Positives = 71/128 (55%), Gaps = 1/128 (0%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V + +IS NR K+ HAE+ AI C+ L L + DLYVTLE Sbjct: 29 GEVPVGAVIVKDGVLISAGRNRRELGKNALYHAELEAIDGACKALGGWRLWQCDLYVTLE 88 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC AI ARIRRL YGA +PK G + + L +H P++ G+ E+ + + Sbjct: 89 PCPMCTGAIINARIRRLCYGAKDPKAGSCGSVVNLFELPY-NHKPQVISGVLEEACAERL 147 Query: 142 QDFFKERR 149 FF+ R Sbjct: 148 SGFFRSLR 155 >gi|323492402|ref|ZP_08097552.1| tRNA-specific adenosine-34 deaminase [Vibrio brasiliensis LMG 20546] gi|323313363|gb|EGA66477.1| tRNA-specific adenosine-34 deaminase [Vibrio brasiliensis LMG 20546] Length = 181 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 77/143 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +FM A+E AQ+A + E+PVGAV V + +II+ N + D TAHAE+ IR Sbjct: 9 QDELFMRRAMELAQHAEEQGEVPVGAVLVKDGEIIAEGWNESIGSHDATAHAEMQTIRKA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 69 GLALENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFEHQAA 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 +H ++ G+ E R +Q FF Sbjct: 129 YHYADVEQGLLEDECRVQLQSFF 151 >gi|71909993|ref|YP_281543.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS5005] gi|60416281|sp|P68999|TADA_STRP1 RecName: Full=tRNA-specific adenosine deaminase gi|71852775|gb|AAZ50798.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS5005] Length = 171 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 5 LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGASN K GG+++ Q T Sbjct: 65 EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGVDSLYQILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ I+Q FF++ R Sbjct: 125 RLNHRVQVERGLLAADCANIMQTFFRQGR 153 >gi|326790135|ref|YP_004307956.1| CMP/dCMP deaminase zinc-binding protein [Clostridium lentocellum DSM 5427] gi|326540899|gb|ADZ82758.1| CMP/dCMP deaminase zinc-binding protein [Clostridium lentocellum DSM 5427] Length = 175 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 59/152 (38%), Positives = 88/152 (57%), Gaps = 6/152 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+K FM AL EA+ A +E P+GAV V ++I R NR K+ AHAE++AI Sbjct: 1 MEKDIEFMKQALIEAEKAFTLDEAPIGAVIVYKEQVIGRGHNRRNTDKNALAHAEVMAIN 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK---GGGIENGTQFY 117 C+ + L E +Y+TLEPC MC+ AI AR+ R+ +GA +PK GG + N Q Sbjct: 61 EACKHIKDWRLEECTIYITLEPCPMCSGAIVQARLPRVVFGARSPKAGFGGSVLNILQMD 120 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 L +H E+ G+ E+ + Q+++ +FK+ R Sbjct: 121 EL---NHRCEVVEGVCEEEASQLLKSYFKQMR 149 >gi|290969052|ref|ZP_06560587.1| cytidine and deoxycytidylate deaminase zinc-binding region [Megasphaera genomosp. type_1 str. 28L] gi|290781008|gb|EFD93601.1| cytidine and deoxycytidylate deaminase zinc-binding region [Megasphaera genomosp. type_1 str. 28L] Length = 157 Score = 96.7 bits (239), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 53/112 (47%), Positives = 65/112 (58%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M ++M AL EA+ A EIP+GAV V N II+RA N L TAHAE+LAI Sbjct: 1 MTLDELYMGKALAEAETAFAVEEIPIGAVIVHENTIIARAYNLRETLPCATAHAELLAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 CR L++ L LYVT EPC MCA AI +R+ RL YG +PK G + Sbjct: 61 KACRHLNRWRLSGCTLYVTTEPCPMCAGAIVNSRLDRLVYGCPDPKAGAVHT 112 >gi|163784431|ref|ZP_02179312.1| Cytosine/adenosine deaminase [Hydrogenivirga sp. 128-5-R1-1] gi|159880298|gb|EDP73921.1| Cytosine/adenosine deaminase [Hydrogenivirga sp. 128-5-R1-1] Length = 146 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 49/138 (35%), Positives = 82/138 (59%), Gaps = 1/138 (0%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71 +EEA+ A ++E+PVGA+ V N +IIS+ N+ + HAEI+AI C+ L L Sbjct: 10 IEEAKKAYKKDEVPVGALIVRNGEIISKGHNQRITKNNALYHAEIVAIEKACKKLKSWRL 69 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 + +++V+LEPC MCA AI +RI+++Y+ A + KGG + + + + + Y Sbjct: 70 DDCEIWVSLEPCVMCAGAIMQSRIKKVYFLAQDEKGGAVISKYRLFDDNKLPFKVD-YEY 128 Query: 132 ISEQRSRQIIQDFFKERR 149 I + + I++ FFKE+R Sbjct: 129 IPVKEASDILKRFFKEKR 146 >gi|313668625|ref|YP_004048909.1| cytosine deaminase [Neisseria lactamica ST-640] gi|313006087|emb|CBN87548.1| putative cytosine deaminase (EC 3.5.4.1) [Neisseria lactamica 020-06] Length = 239 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+A+ +AL EIPVGAV V + KII+ A N +V+ HAEI A+ + Sbjct: 95 FMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSKI 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ AR++R+ YGA PK G + + + Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARVKRVIYGAGEPKTGAAGSIVNLFADKRLNTHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237 >gi|327481727|gb|AEA85037.1| cytidine/deoxycytidylate deaminase [Pseudomonas stutzeri DSM 4166] Length = 160 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 49/127 (38%), Positives = 74/127 (58%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V +I+ R N D +AHAE++AIR + L LP LYVTLEP Sbjct: 31 EVPVGAVLVHEGQIVGRGFNCPISRHDPSAHAEMVAIRAAAQALQNYRLPGSTLYVTLEP 90 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C+MCA I +R++R+ YGA+ PK G + + QF+ +H + G+ + ++ Sbjct: 91 CSMCAGLIVHSRVQRVVYGATEPKAGVVVSRGQFFDQGFLNHRVLVEGGVLAEECGAVLS 150 Query: 143 DFFKERR 149 +FF++RR Sbjct: 151 EFFRQRR 157 >gi|85059758|ref|YP_455460.1| tRNA-specific adenosine deaminase [Sodalis glossinidius str. 'morsitans'] gi|84780278|dbj|BAE75055.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 169 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 59/144 (40%), Positives = 75/144 (52%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 V+M AL A A E+PVGAV VLN II NR+ D TAHAEI+A+R G + Sbjct: 9 VWMRHALMLAGRAEAEGEVPVGAVLVLNGAIIGEGWNRSIGHHDPTAHAEIMALRQGGQQ 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + LYVTLEPC MCA A+ ARI RL +GA + K G + +H Sbjct: 69 AGNYRLLKATLYVTLEPCVMCAGAMIHARIGRLVFGARDEKTGAAGSLMDVLGHPGMNHR 128 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ + Q + DFF+ RR Sbjct: 129 IELTGDMLAQACAAQLSDFFRRRR 152 >gi|315924779|ref|ZP_07920996.1| tRNA-specific adenosine deaminase [Pseudoramibacter alactolyticus ATCC 23263] gi|315621678|gb|EFV01642.1| tRNA-specific adenosine deaminase [Pseudoramibacter alactolyticus ATCC 23263] Length = 164 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 52/142 (36%), Positives = 76/142 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+E + A E PVGAV V ++++ NR L+D TAHAE+L IR + L Sbjct: 19 WMRLALDEGRQALAAGEFPVGAVVVCGGQVVAADHNRKETLQDPTAHAELLVIRAAAQRL 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVT EPC MC A+ AR+ +L YGA+ + G +E ++ Sbjct: 79 GRWRLDDCTLYVTAEPCPMCMGAVIQARLAKLVYGAAEKRFGAVETTADLGRHPMLANAM 138 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 EIY GI E ++++ F R Sbjct: 139 EIYAGICENDCIELMKQCFYNR 160 >gi|146312685|ref|YP_001177759.1| tRNA-specific adenosine deaminase [Enterobacter sp. 638] gi|145319561|gb|ABP61708.1| tRNA-adenosine deaminase [Enterobacter sp. 638] Length = 169 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G +L Sbjct: 11 WMRHALLLAKRAWDEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MC+ A+ +RI L +GA + K G + +H Sbjct: 71 QNYRLLDTTLYVTLEPCVMCSGAMVHSRIGTLVFGARDEKTGAAGSLMNVLGHPGMNHQV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ ++ DFF+ RR Sbjct: 131 QVIDGVLAPECSGLLSDFFRMRR 153 >gi|331003430|ref|ZP_08326929.1| hypothetical protein HMPREF0491_01791 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412476|gb|EGG91865.1| hypothetical protein HMPREF0491_01791 [Lachnospiraceae oral taxon 107 str. F0167] Length = 155 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 56/153 (36%), Positives = 83/153 (54%), Gaps = 6/153 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + N F+ A+++A+ A ++P+G V V +KII+R NR + K +HAEI+AI+ Sbjct: 1 MDRDNYFLKEAVKQAKKAGEIGDVPIGCVIVFEDKIIARGYNRRNKDKSTLSHAEIIAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ + L + +Y+TLEPC MCA AI +RI+R+ GA NPK G + Sbjct: 61 KACKKIGDWRLEDCTMYITLEPCPMCAGAIIQSRIKRVVLGAMNPKAGCAGSIINILQTE 120 Query: 121 TCHHSPEIY----PGISEQRSRQIIQDFFKERR 149 +H EI P SE S ++ FFK R Sbjct: 121 GFNHKTEISLIDEPLHSECVS--LLTSFFKALR 151 >gi|170718532|ref|YP_001783741.1| CMP/dCMP deaminase zinc-binding [Haemophilus somnus 2336] gi|168826661|gb|ACA32032.1| CMP/dCMP deaminase zinc-binding [Haemophilus somnus 2336] Length = 166 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A EIPVGAV V I++ N + D TAHAEI+A+R + L Sbjct: 10 MRYALSLADKAEALGEIPVGAVLVDKQGDILAEGWNLSIIHNDPTAHAEIIALRQAGQKL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPCTMCA AI +RI RL +GA + K G + + F+ +H Sbjct: 70 QNYRLLDTTLYVTLEPCTMCAGAILHSRIGRLVFGAYDYKTGAVGSRFHFFNDYKMNHML 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ ++ Q I FF++RR Sbjct: 130 EITGGVLQEECSQKISTFFQKRR 152 >gi|325128107|gb|EGC51002.1| tRNA-specific adenosine deaminase [Neisseria meningitidis N1568] Length = 163 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ R + Sbjct: 19 FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGREI 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 79 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 138 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 139 AIRGGILQEECRAVLSRFFQNKR 161 >gi|329570031|gb|EGG51786.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX1467] Length = 144 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 50/127 (39%), Positives = 71/127 (55%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+P+GAV V +II R N ++ TAHAE+ AI+ CR + L E L+VTLEP Sbjct: 3 EVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACRGIENWRLEETQLFVTLEP 62 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MC+ A+ LARI +YYGA++PK G +H + G+ E+ R ++ Sbjct: 63 CPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVAYVEAGVLEEECRLLLV 122 Query: 143 DFFKERR 149 FFK+ R Sbjct: 123 QFFKKLR 129 >gi|283131371|dbj|BAI63375.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae subsp. equisimilis] gi|283131431|dbj|BAI63432.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae subsp. equisimilis] Length = 183 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 53/149 (35%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 13 LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + ++VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 73 EANAYEGNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDE 132 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + I+Q FF++ R Sbjct: 133 RLNHRVQVERGLLAEDCANIMQTFFRQGR 161 >gi|330872834|gb|EGH06983.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 169 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 51/127 (40%), Positives = 73/127 (57%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V N +II R N D +AHAE++AIR + L LP LYVTLEP Sbjct: 31 EVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRDAAKALDNYRLPGSTLYVTLEP 90 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C+MCA I +R+ R+ YGA PK G +++ QF++ +H G+ + ++ Sbjct: 91 CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRVLFEGGVLGEECGAMLS 150 Query: 143 DFFKERR 149 +FF+ RR Sbjct: 151 EFFRMRR 157 >gi|323487362|ref|ZP_08092661.1| tRNA-specific adenosine deaminase [Clostridium symbiosum WAL-14163] gi|323399323|gb|EGA91722.1| tRNA-specific adenosine deaminase [Clostridium symbiosum WAL-14163] Length = 184 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ EA+ A E+P+G V V KII R NR K+V +HAEI AI+ C+ + Sbjct: 36 YMRAAIREAKKAYALGEVPIGCVIVFEGKIIGRGYNRRIADKNVLSHAEINAIKKACKKM 95 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +Y+TLEPC MCA AI ARI ++ G+ NPK G + +H Sbjct: 96 GDWRLEGCTMYITLEPCPMCAGAIVQARIPKVLIGSMNPKAGCAGSVMNLLDEKGFNHQV 155 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E GI + ++++FF+E R Sbjct: 156 ETEIGILGEECSGMLKEFFRELR 178 >gi|283131386|dbj|BAI63389.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae subsp. equisimilis] Length = 183 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 19 FMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEANAHE 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LARI + YGASN K GG ++ Q T +H Sbjct: 79 GNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDERLNHRV 138 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + I+Q FF++ R Sbjct: 139 QVERGLLAEDCANIMQTFFRQGR 161 >gi|222053168|ref|YP_002535530.1| CMP/dCMP deaminase zinc-binding [Geobacter sp. FRC-32] gi|221562457|gb|ACM18429.1| CMP/dCMP deaminase zinc-binding [Geobacter sp. FRC-32] Length = 161 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 71/129 (55%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 R E+P+GAV V + KII+R N ++D +AHAE++AIR G + L LYVTL Sbjct: 24 RGEVPIGAVIVRDGKIIARGHNLREGMQDPSAHAELIAIRRGAKKNGNWRLLGTTLYVTL 83 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MC AI LAR+ ++ +G +PKGG + + +H + GI E + Sbjct: 84 EPCLMCMGAILLARVEKVVFGCHDPKGGAAGSLYNLSDDSRLNHRVTLVSGIREAECAAL 143 Query: 141 IQDFFKERR 149 + DFF R Sbjct: 144 LSDFFAALR 152 >gi|282899006|ref|ZP_06306988.1| Cytidine/deoxycytidylate deaminase, zinc-binding region protein [Cylindrospermopsis raciborskii CS-505] gi|281196146|gb|EFA71061.1| Cytidine/deoxycytidylate deaminase, zinc-binding region protein [Cylindrospermopsis raciborskii CS-505] Length = 154 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 77/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 MS AL+ AQ A E+PVG V V +I + NR + +D TAHAEI+AIR R L Sbjct: 1 MSEALKLAQIAGDAGEVPVGCVIVNPQGNLIGQGENRKQRDQDPTAHAEIIAIRSAARTL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI AR++ L Y +PK G I +H Sbjct: 61 QNWHLDQCTLYVTLEPCPMCAGAIIHARLQTLVYAVDDPKTGAIRTVINIPGSPASNHRL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E SR+ +Q +F +R Sbjct: 121 QVIGGMLESASREKLQSWFVGQR 143 >gi|307245435|ref|ZP_07527523.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254389|ref|ZP_07536227.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258848|ref|ZP_07540580.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853776|gb|EFM85993.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862688|gb|EFM94644.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867199|gb|EFM99055.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 196 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/140 (42%), Positives = 76/140 (54%), Gaps = 1/140 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALE A A EIPVGAV V II N+ +L D +AHAE+LAIR ++ Sbjct: 43 FMRYALELADRAEAIGEIPVGAVLVDQEGNIIGEGWNQVIQLSDPSAHAEMLAIRQAGKV 102 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + LY TLEPCTMCA AI +R+RRL +GAS+ K G I + + +H Sbjct: 103 QRNYRLLDCTLYATLEPCTMCAGAILHSRLRRLVFGASDYKTGAIGSRFHLFEDYKMNHF 162 Query: 126 PEIYPGISEQRSRQIIQDFF 145 EI G+ + Q I FF Sbjct: 163 LEIRGGVLAEECSQKISRFF 182 >gi|225575495|ref|ZP_03784105.1| hypothetical protein RUMHYD_03586 [Blautia hydrogenotrophica DSM 10507] gi|225037292|gb|EEG47538.1| hypothetical protein RUMHYD_03586 [Blautia hydrogenotrophica DSM 10507] Length = 183 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ +A+ A +E+P+G V V + KII+R NR ++ +HAE+ AI+ Sbjct: 24 MTEQEKYMREAIRQAKKAWALDEVPIGCVIVFDGKIIARGYNRRNTDRNTLSHAELNAIK 83 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L +YVTLEPC MCA AI ARI + G+ NPK G + + Sbjct: 84 KASKKLGDWRLEGCTMYVTLEPCQMCAGAIVQARIDEVVIGSMNPKAGCAGSVLNLLDIP 143 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I GI ++ ++ DFF+E R Sbjct: 144 QFNHQVKITRGILQEECSALLSDFFRELR 172 >gi|323340129|ref|ZP_08080393.1| tRNA-specific adenosine deaminase [Lactobacillus ruminis ATCC 25644] gi|323092320|gb|EFZ34928.1| tRNA-specific adenosine deaminase [Lactobacillus ruminis ATCC 25644] Length = 153 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 73/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA++A E+P+G V V +II R NR EL+D T HAE++AIR R L Sbjct: 9 FMKEALKEAKSAYEAGEVPIGCVIVSGGRIIGRGHNRREELQDATEHAEMIAIREANRTL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L+VTLEPC MC AI ARI ++YGA + K G +H Sbjct: 69 GSFRLENCALFVTLEPCPMCTGAIINARIPEVFYGAPDEKAGTCGTLMNLLGDERFNHRA 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I G +++ DFF R Sbjct: 129 SIEKGCLGNECGKLLSDFFASLR 151 >gi|52424459|ref|YP_087596.1| hypothetical protein MS0404 [Mannheimia succiniciproducens MBEL55E] gi|52306511|gb|AAU37011.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 176 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 79/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL A A EIPVGAV V II N + D TAHAEI+A+R + + Sbjct: 12 MNRALFLADKAEALGEIPVGAVLVDERGNIIGEGWNLSIVNSDPTAHAEIIALRNAAQKI 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMCA AI +RI+RL +GAS+ K G + + F+ +H Sbjct: 72 QNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAVGSRFHFFEDYKMNHGV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + + Q + FF++RR Sbjct: 132 EITSGVLQDQCSQKLSRFFQKRR 154 >gi|323128130|gb|ADX25427.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 175 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 53/149 (35%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 5 LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + ++VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 65 EANAYEGNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + I+Q FF++ R Sbjct: 125 RLNHRVQVERGLLAEDCANIMQTFFRQGR 153 >gi|323694203|ref|ZP_08108379.1| cytidine and deoxycytidylate deaminase [Clostridium symbiosum WAL-14673] gi|323501676|gb|EGB17562.1| cytidine and deoxycytidylate deaminase [Clostridium symbiosum WAL-14673] Length = 155 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ EA+ A E+P+G V V KII R NR K+V +HAEI AI+ C+ + Sbjct: 7 YMRAAIREAKKAYALGEVPIGCVIVFEGKIIGRGYNRRIADKNVLSHAEINAIKKACKKM 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +Y+TLEPC MCA AI ARI ++ G+ NPK G + +H Sbjct: 67 GDWRLEGCTMYITLEPCPMCAGAIVQARIPKVLIGSMNPKAGCAGSVMNLLDEKGFNHQV 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E GI + ++++FF+E R Sbjct: 127 ETEIGILGEECSGMLKEFFRELR 149 >gi|283131399|dbj|BAI63401.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae subsp. equisimilis] Length = 175 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 11 FMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEANAHE 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LARI + YGASN K GG ++ Q T +H Sbjct: 71 GNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDERLNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + I+Q FF++ R Sbjct: 131 QVERGLLAEDCANIMQTFFRQGR 153 >gi|283131328|dbj|BAI63333.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae subsp. equisimilis] Length = 183 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 13 LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 73 EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 132 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + I+Q FF++ R Sbjct: 133 RLNHRVQVERGLLAEDCANIMQTFFRQGR 161 >gi|262200019|ref|YP_003271228.1| CMP/dCMP deaminase zinc-binding protein [Haliangium ochraceum DSM 14365] gi|262083366|gb|ACY19335.1| CMP/dCMP deaminase zinc-binding protein [Haliangium ochraceum DSM 14365] Length = 147 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 52/124 (41%), Positives = 73/124 (58%), Gaps = 1/124 (0%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 ++PVGAV V + +II+R NR + KD TAHAE+ A+R R L + E LYVT E Sbjct: 15 GDVPVGAVIVCDGEIIARGRNRRQLDKDPTAHAEVEALRSASRSLGNWRV-EGTLYVTQE 73 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA A+ AR++RL YG NPK G + + + A +H E+ G+S Q ++ Sbjct: 74 PCPMCAGALVNARVQRLVYGCPNPKAGSVHTLYRLVSDARLNHRIEVRGGVSAQACTGLL 133 Query: 142 QDFF 145 + FF Sbjct: 134 KSFF 137 >gi|207743199|ref|YP_002259591.1| cytosine/adenosine deaminase protein [Ralstonia solanacearum IPO1609] gi|206594596|emb|CAQ61523.1| cytosine/adenosine deaminase protein [Ralstonia solanacearum IPO1609] Length = 178 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 53/148 (35%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL +A+ A E+PVGAV V N+I+ N D +AHAE+ A+R Sbjct: 12 ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LPE +++VTLEPC MCA A+ AR+ R+ YGA +PK G + + Sbjct: 72 AAVTLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I + Q +++ FF ERR Sbjct: 132 LNHQTAILGSVLAQECGDMLRAFFAERR 159 >gi|161869845|ref|YP_001599014.1| cytidine and deoxycytidylate deaminase family protein [Neisseria meningitidis 053442] gi|161595398|gb|ABX73058.1| cytidine and deoxycytidylate deaminase family protein [Neisseria meningitidis 053442] Length = 239 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ R + Sbjct: 95 FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGREI 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237 >gi|300865868|ref|ZP_07110611.1| tRNA-adenosine deaminase [Oscillatoria sp. PCC 6506] gi|300336131|emb|CBN55769.1| tRNA-adenosine deaminase [Oscillatoria sp. PCC 6506] Length = 169 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/144 (41%), Positives = 76/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +MS A++ AQ A E+PVGA V + K+I++ NR D TAHAEILA+R Sbjct: 21 WMSRAIKLAQEAGEAGEVPVGAAIVDSQGKLIAQGQNRRERDCDPTAHAEILALRGAGIA 80 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LYVTLEPC MCA AI ARI L YG +PK G I +H Sbjct: 81 LQNWHLNACTLYVTLEPCPMCAGAIVQARIGLLVYGVDDPKSGTIRTVGNIPDSDCSYHR 140 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI E R+ +Q +F +RR Sbjct: 141 LPVLGGIMESECREQLQSWFAKRR 164 >gi|261252226|ref|ZP_05944799.1| tRNA-specific adenosine-34 deaminase [Vibrio orientalis CIP 102891] gi|260935617|gb|EEX91606.1| tRNA-specific adenosine-34 deaminase [Vibrio orientalis CIP 102891] Length = 178 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 75/139 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E A +A + E+PVGAV V + +II+ N + D TAHAE+ IR +L Sbjct: 13 FMRRAMELAAHAETQGEVPVGAVLVKDGEIIAEGWNESIGQHDATAHAEMQTIRKAGEVL 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +R++R+ +GA + K G + +H Sbjct: 73 ENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFEHQAAYHYA 132 Query: 127 EIYPGISEQRSRQIIQDFF 145 ++ G+ E R +Q FF Sbjct: 133 DVEKGLLEDECRVQLQAFF 151 >gi|149375103|ref|ZP_01892875.1| cytidine/deoxycytidylate deaminase family protein [Marinobacter algicola DG893] gi|149360467|gb|EDM48919.1| cytidine/deoxycytidylate deaminase family protein [Marinobacter algicola DG893] Length = 166 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/139 (41%), Positives = 72/139 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +MS AL+ A A E+PVGAV VL+ K I N D TAHAEI A+R + Sbjct: 10 WMSRALQLAGQAGAAGEVPVGAVVVLDGKEIGTGFNAPISGCDPTAHAEIRALRDAAARV 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP LYVTLEPCTMC AI +RI RL YGA+ PK G + + Q + Sbjct: 70 GNYRLPGATLYVTLEPCTMCVGAIVHSRISRLVYGAAEPKAGAVASARQTLNEPHLNWRV 129 Query: 127 EIYPGISEQRSRQIIQDFF 145 E G+ + +I +FF Sbjct: 130 ESVGGVLADQCSHVISEFF 148 >gi|282891324|ref|ZP_06299826.1| hypothetical protein pah_c050o112 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498821|gb|EFB41138.1| hypothetical protein pah_c050o112 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 176 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/145 (39%), Positives = 81/145 (55%), Gaps = 4/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL++A A E+PVGA+ V KII+R N+ L+D TAHAE+L I G L Sbjct: 17 FMLEALKQAWKAFQAKEVPVGAILVHEGKIIARGYNQVELLRDATAHAEVLCITAGEAAL 76 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH--H 124 S L + LY T+EPC MCA A+ L+R+ L +GA + + G NG+ L H H Sbjct: 77 SNWRLSQCKLYCTIEPCAMCAGAMLLSRVEELIWGAPDIRHGA--NGSWVNLLNIPHPTH 134 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ GI + +++ FF+ RR Sbjct: 135 QIKVKSGILKDPCALLMKQFFQIRR 159 >gi|298491580|ref|YP_003721757.1| CMP/dCMP deaminase zinc-binding protein ['Nostoc azollae' 0708] gi|298233498|gb|ADI64634.1| CMP/dCMP deaminase zinc-binding protein ['Nostoc azollae' 0708] Length = 165 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/148 (39%), Positives = 76/148 (51%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +M+ ALE AQ A E+PVGAV V + +I+ NR +D T HAEI+AIR Sbjct: 16 KHQKWMNHALELAQVAGDAGEVPVGAVIVDAADNLIATGENRKERDQDPTGHAEIMAIRA 75 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L + LYVTLEPC MCA AI AR+ L YG + K G I Sbjct: 76 ASQSLQNWRLDKYTLYVTLEPCPMCAGAIVHARLATLVYGVDDTKTGAIRTVINIPNSPA 135 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ GI E R +Q +F +R Sbjct: 136 SNHPLQVVGGILESACRHQLQTWFTTKR 163 >gi|254442522|ref|ZP_05055998.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Verrucomicrobiae bacterium DG1235] gi|198256830|gb|EDY81138.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Verrucomicrobiae bacterium DG1235] Length = 177 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A +A A NE+P+GAV +++ A NR D TAHAE+LAI + Sbjct: 28 YMELAYNQAIEAWRENEVPIGAVIEYKGEVVGSAHNRVESTNDPTAHAEMLAITQASSAI 87 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LYVT EPC MC+ A ++R++R+ Y +PK GG+ + T +HS Sbjct: 88 KNWRLNEATLYVTKEPCPMCSGASMMSRLKRVVYAVPDPKMGGLGGLYDVNSYPTINHSL 147 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ +++Q FF+ +R Sbjct: 148 EVEIGVLRDDCLELLQAFFQLKR 170 >gi|53802428|ref|YP_112823.1| zinc-binding domain-containing protein [Methylococcus capsulatus str. Bath] gi|53756189|gb|AAU90480.1| zinc-binding domain protein [Methylococcus capsulatus str. Bath] Length = 137 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 75/135 (55%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74 A+ A E+P+GAV V N +I+ N+ D TAHAEI+A+R L L + Sbjct: 3 ARTAETAGEVPIGAVLVKNGEILGEGHNQPISTHDPTAHAEIVALRAAGARLGNYRLVDT 62 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134 LYVTLEPC MC AI AR+ RL +GA++P+ G + + +H E+ G+ Sbjct: 63 TLYVTLEPCAMCMGAILHARVGRLVFGAADPRRGAAISALRLNEAEFMNHRVELLEGVLA 122 Query: 135 QRSRQIIQDFFKERR 149 + Q+++DFF+ RR Sbjct: 123 EECSQLLRDFFRNRR 137 >gi|330959126|gb|EGH59386.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. maculicola str. ES4326] Length = 169 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 51/127 (40%), Positives = 73/127 (57%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V + +II R N D +AHAE++AIR + L LP LYVTLEP Sbjct: 31 EVPVGAVLVQHGEIIGRGYNCPISGSDPSAHAEMMAIRDAAKALDNYRLPGSTLYVTLEP 90 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C+MCA I +R+ R+ YGA PK G +E+ QF++ +H G+ + ++ Sbjct: 91 CSMCAGLIVHSRVARVVYGALEPKAGIVESQGQFFSQGFLNHRVLFEGGVLGEECGAMLS 150 Query: 143 DFFKERR 149 +FF+ RR Sbjct: 151 EFFRMRR 157 >gi|327438138|dbj|BAK14503.1| cytosine/adenosine deaminase [Solibacillus silvestris StLB046] Length = 167 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 50/127 (39%), Positives = 73/127 (57%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+P+GAV V ++II+RA N ++ HAE +AI+ C+ + L E LYVTLEP Sbjct: 25 EVPIGAVIVYKDEIIARAHNLRETTQNALTHAESMAIQEACKKVGSWRLEETTLYVTLEP 84 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCA AI +RI R+ YGA + K G +++ + A +H + G+ + QI+ Sbjct: 85 CPMCAGAILQSRIPRVVYGARDIKAGCVDSLYRLLNDARFNHECTVTEGVMAEECGQILT 144 Query: 143 DFFKERR 149 DFFK R Sbjct: 145 DFFKALR 151 >gi|88799915|ref|ZP_01115487.1| hypothetical protein MED297_15045 [Reinekea sp. MED297] gi|88777346|gb|EAR08549.1| hypothetical protein MED297_15045 [Reinekea sp. MED297] Length = 162 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL++A+ A E+P+GAV ++II N+ D +AHAE+LAIR + + Sbjct: 8 YMRAALQQAEQAYRAGEVPIGAVVTYQDRIIGEGYNQTITQLDPSAHAEMLAIRAAAQAI 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVT+EPCTMC + +RI L +GA PK G I + + + A +H Sbjct: 68 GNYRLVGCTLYVTIEPCTMCVGLLVHSRIDCLVFGAPEPKAGAIRSASCVHEQAHFNHEF 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + + FF+ERR Sbjct: 128 EIRSGVLAEDCSGTMSRFFRERR 150 >gi|198274233|ref|ZP_03206765.1| hypothetical protein BACPLE_00373 [Bacteroides plebeius DSM 17135] gi|198272908|gb|EDY97177.1| hypothetical protein BACPLE_00373 [Bacteroides plebeius DSM 17135] Length = 144 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M AL EA AA R E+PVGAV V ++I++RA N L DVTAHAE+ A+ Sbjct: 1 MADDSFYMKQALAEAARAAERGEVPVGAVVVCRDRILARAHNLTETLHDVTAHAEMQALT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L + LYVT+EPC MCA AI+ +++ RL +GA + K G Q Y Sbjct: 61 AAANSLGAKYLTDCTLYVTVEPCVMCAGAIAWSQVGRLVFGAEDEK-----RGYQRYAPQ 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ +++DFF++RR Sbjct: 116 ALHPKTVVVKGVLADECAGLMKDFFRKRR 144 >gi|317473697|ref|ZP_07932984.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Anaerostipes sp. 3_2_56FAA] gi|316898818|gb|EFV20845.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Anaerostipes sp. 3_2_56FAA] Length = 152 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM A+++A+ AA ++P+G V VL+ KII+RA N+ + K AHAE+LAI Sbjct: 1 MNENEKFMKEAIKQAKKAAAIGDVPIGCVIVLDGKIIARAYNQRNKRKTTLAHAELLAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L E +Y+TLEPC MCA AI ARI ++ GA NPK G + Sbjct: 61 KASKKTGDWRLEECTMYITLEPCQMCAGAIVQARIPKVVIGAMNPKAGCAGSILNILQRE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + ++ DFF+E R Sbjct: 121 EFNHQAEIESGVLREECSHMMSDFFRELR 149 >gi|170702297|ref|ZP_02893195.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria IOP40-10] gi|170132806|gb|EDT01236.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria IOP40-10] Length = 193 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 50/126 (39%), Positives = 71/126 (56%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I+R N D +AHAE+ A+RM + L +P +LYVTLEPC Sbjct: 51 VPVGAVLVCGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLEPC 110 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARI R+ YGA++PK G + + +H E+ G+ ++ Sbjct: 111 LMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAALKS 170 Query: 144 FFKERR 149 FF ERR Sbjct: 171 FFAERR 176 >gi|149278271|ref|ZP_01884409.1| putative cytosine/adenosine deaminase [Pedobacter sp. BAL39] gi|149231037|gb|EDM36418.1| putative cytosine/adenosine deaminase [Pedobacter sp. BAL39] Length = 157 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 74/143 (51%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALEEA A + E+P+GA+ V +I+ R N +L DVTAHAE+ A + L Sbjct: 19 YMRLALEEANKAYVAEEVPIGAIVVCKGRIVGRGYNLTEQLNDVTAHAEMQAFTAAAQTL 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + +YVT+EPC MCA A ++ RL YGA+ PK G G + H Sbjct: 79 GGKYLKDCTIYVTVEPCVMCAGASYWMQVGRLVYGATEPKRGFTSRGAKL-----LHPKT 133 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + ++ FF +R Sbjct: 134 ILKAGVLAEECGALMTRFFANKR 156 >gi|269216548|ref|ZP_06160402.1| tRNA-specific adenosine deaminase [Slackia exigua ATCC 700122] gi|269130077|gb|EEZ61159.1| tRNA-specific adenosine deaminase [Slackia exigua ATCC 700122] Length = 212 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM A EA+ A E+P+GAV V + ++++RA NR +D + HAE A+R Sbjct: 54 IEKDESFMREAYAEARRAFEEGEVPIGAVVVCDGRVVARAHNRREADRDPSGHAEFSAMR 113 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + L +YVT+EPC MCA + ARI R +GA +PK G + + + Sbjct: 114 AAAQALGRWRLSGCTVYVTVEPCIMCAGLMHQARIDRCVWGAPDPKAGALGSLYAIHADE 173 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E G+ + +++DFF RR Sbjct: 174 RLNHRFESTGGVWATQCGSLMRDFFACRR 202 >gi|225376320|ref|ZP_03753541.1| hypothetical protein ROSEINA2194_01960 [Roseburia inulinivorans DSM 16841] gi|225211696|gb|EEG94050.1| hypothetical protein ROSEINA2194_01960 [Roseburia inulinivorans DSM 16841] Length = 166 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 49/145 (33%), Positives = 76/145 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ EA+ A +E+P+G V V + II+R NR + AHAE+ AI+ Sbjct: 3 MTQDEKYMKAAIREAKKAYALDEVPIGCVIVQDGTIIARGYNRRNTEGNTLAHAELTAIK 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + +YVTLEPC MCA AI +R++++ NPK G + +A Sbjct: 63 KASKKTGDWRLEDCTMYVTLEPCQMCAGAIVQSRMKKVVIATMNPKAGCAGSVLNLLQMA 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +H EI G+ E+ ++ DFF Sbjct: 123 AFNHQVEIEKGVLEEECSMMLSDFF 147 >gi|297838639|ref|XP_002887201.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis lyrata subsp. lyrata] gi|297333042|gb|EFH63460.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis lyrata subsp. lyrata] Length = 1135 Score = 96.3 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 67/162 (41%), Positives = 84/162 (51%), Gaps = 20/162 (12%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FM AL EA+ AA E+PVGAV V + KII+R N EL+D TAHAE++ IR G + Sbjct: 941 IFMREALVEAKKAADTWEVPVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREGSKA 1000 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN-------------PKGGGIEN 112 L L + LYVTLEPC MCA AI AR+ L +GA N P G G N Sbjct: 1001 LRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGAPNKLLGADGSWIRLFPGGEG--N 1058 Query: 113 GTQFYTLATCHHSPE-----IYPGISEQRSRQIIQDFFKERR 149 G++ P I G+ E Q +Q FF+ RR Sbjct: 1059 GSEVSEKPPPPVHPFHPKMTIRRGVLESECAQTMQQFFQLRR 1100 >gi|139473043|ref|YP_001127758.1| deaminase [Streptococcus pyogenes str. Manfredo] gi|134271289|emb|CAM29505.1| putative deaminase [Streptococcus pyogenes str. Manfredo] Length = 157 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ + + EIP+G V V + +II R N E HAEI+AI Sbjct: 5 LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEIMAIN 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 65 EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ I+Q FF++ R Sbjct: 125 RLNHRVQVERGLLAADCANIMQTFFRQGR 153 >gi|295094398|emb|CBK83489.1| Cytosine/adenosine deaminases [Coprococcus sp. ART55/1] Length = 169 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ +A+ A ++P+G V V +++II+R N+ K AHAEILAI + L Sbjct: 20 YMDKAIAQAKRAYANGDVPIGCVIVHDDRIIARGFNKRNLKKTTLAHAEILAIEQASKKL 79 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E +YVTLEPC MCA AI ARI + G NPK G + + +H Sbjct: 80 GDWRLEECTMYVTLEPCQMCAGAIVQARIPNVVIGCMNPKAGCAGSIINLLDMKQFNHQV 139 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + ++++ FF++ R Sbjct: 140 EVIRGVRQDECSEMMKSFFRDLR 162 >gi|281358294|ref|ZP_06244776.1| CMP/dCMP deaminase zinc-binding [Victivallis vadensis ATCC BAA-548] gi|281315121|gb|EFA99152.1| CMP/dCMP deaminase zinc-binding [Victivallis vadensis ATCC BAA-548] Length = 434 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+NAA E+PVGAVAV + ++++ A NR E +HAEI + + Sbjct: 8 FMRLALDEARNAAAAGEVPVGAVAVRDGRVLATARNRVEERHSAVSHAEIELLHAVEAVT 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + E+ Y+T EPC MCA A+ AR R+ +G ++P+ GG + P Sbjct: 68 GDWRMDEITFYITKEPCPMCAGALVNARAGRIVFGLADPRMGGCGSALDITGHPGVLWHP 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + +++II++FF+ R Sbjct: 128 EVEGGVLAEEAQRIIREFFRNSR 150 >gi|225849713|ref|YP_002729947.1| tRNA-specific adenosine deaminase [Persephonella marina EX-H1] gi|225645628|gb|ACO03814.1| tRNA-specific adenosine deaminase [Persephonella marina EX-H1] Length = 154 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A EEA A ++E+P+GAV V + +II + N+ E + HAEI+AI CR Sbjct: 7 FLDIAYEEALKAYEKDEVPIGAVIVKDGEIIGKGHNQRIEKNNALYHAEIVAIEEACRNT 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVT+EPC MCA AI +RI+++ +GA + KGG + + + + Sbjct: 67 GSWRLDGCTLYVTVEPCVMCAGAIMQSRIKKVVFGALDQKGGAVVSKYRLFDDGKLPFKV 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + Y I+ +++ I++DFF +R Sbjct: 127 D-YSLINYEKASIILKDFFLNKR 148 >gi|225423812|ref|XP_002277950.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1358 Score = 95.9 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 55/103 (53%), Positives = 65/103 (63%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +FM AL EA+ AA E+PVGAV V + KII+R NR EL+D TAHAE++ IR Sbjct: 1155 KIDEMFMREALLEAKKAANAWEVPVGAVLVQHGKIIARGCNRVEELRDSTAHAEMICIRE 1214 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +L L E LYVTLEPC MCA AI ARI L +GA N Sbjct: 1215 ASNLLRTWRLSETTLYVTLEPCPMCAGAILQARIDTLVWGAPN 1257 >gi|282854964|ref|ZP_06264298.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes J139] gi|282582110|gb|EFB87493.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes J139] gi|314922049|gb|EFS85880.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL001PA1] gi|314965899|gb|EFT09998.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL082PA2] gi|314980659|gb|EFT24753.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL110PA3] gi|315090999|gb|EFT62975.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL110PA4] gi|315095126|gb|EFT67102.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL060PA1] gi|315105358|gb|EFT77334.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL050PA2] gi|327328755|gb|EGE70515.1| tRNA-specific adenosine deaminase [Propionibacterium acnes HL103PA1] Length = 156 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL+ A+ AA ++P+GAV + + +++S AGN D TAHAE+LAIR Sbjct: 8 MTQALDVARRAATWGDVPIGAVILGADGEVLSEAGNERERTGDPTAHAEVLAIRRAAEAR 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPCTMCA I ARI R+ +GA + K G + + H P Sbjct: 68 DGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDSKAGAVSSLFDVMRDPRLPHRP 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + S ++++FF R Sbjct: 128 KVVTGVMAEESSALLREFFDGHR 150 >gi|304319888|ref|YP_003853531.1| cytidine and deoxycytidylate deaminase family protein [Parvularcula bermudensis HTCC2503] gi|303298791|gb|ADM08390.1| cytidine and deoxycytidylate deaminase family protein [Parvularcula bermudensis HTCC2503] Length = 172 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 60/144 (41%), Positives = 76/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL A AA E+PVGAV + ++I+ A N D TAHAE+ +R G Sbjct: 16 WMDHALGLASMAARNGEVPVGAVLLSATGQLIAEAVNTPIAQCDPTAHAELAVLRKGALA 75 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L VTLEPC MCA AI ARI L YGA +PKGG + +G + T HH Sbjct: 76 TGNYRLTGTTLLVTLEPCAMCAGAICHARIGHLVYGADDPKGGAVRHGATLFDQVTTHHR 135 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P + GI S +++ FF ERR Sbjct: 136 PRVTAGIRADESAALLRSFFAERR 159 >gi|282856349|ref|ZP_06265628.1| cytidine and deoxycytidylate deaminase family protein [Pyramidobacter piscolens W5455] gi|282585720|gb|EFB91009.1| cytidine and deoxycytidylate deaminase family protein [Pyramidobacter piscolens W5455] Length = 166 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/144 (43%), Positives = 80/144 (55%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M+ ALE AA +IPVGA+ V +II R NR R D TAHAE++A+R R Sbjct: 8 YMNLALELGLQAAREGDIPVGALVVDPCGEIIGRGRNRRRIEHDPTAHAEVVALREAARN 67 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LYVTLEPC MCA A+ AR+ RL YG ++PK G H Sbjct: 68 LGVWNLNGCSLYVTLEPCPMCAGALVQARVSRLVYGCTDPKAGACGTLYDLTRDTRLFHR 127 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 ++ PG+ EQ R ++QDFF+E R Sbjct: 128 LQVVPGVMEQECRALLQDFFRECR 151 >gi|297581254|ref|ZP_06943178.1| zinc-binding domain-containing protein [Vibrio cholerae RC385] gi|297534570|gb|EFH73407.1| zinc-binding domain-containing protein [Vibrio cholerae RC385] Length = 193 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 72/129 (55%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 + E+PVGAV V + +II+ N + D TAHAEI IR + LS L + LYVTL Sbjct: 45 QGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKALSNYRLLDTTLYVTL 104 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A+ +R++R+ YGA + K G ++ +H + G+ E+ R Sbjct: 105 EPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAAYHYATVEKGLLEEECRAQ 164 Query: 141 IQDFFKERR 149 +Q FF+ RR Sbjct: 165 LQAFFQRRR 173 >gi|207723447|ref|YP_002253846.1| cytosine/adenosine deaminase protein [Ralstonia solanacearum MolK2] gi|206588648|emb|CAQ35611.1| cytosine/adenosine deaminase protein [Ralstonia solanacearum MolK2] Length = 194 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 53/148 (35%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL +A+ A E+PVGAV V N+I+ N D +AHAE+ A+R Sbjct: 28 ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 87 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LPE +++VTLEPC MCA A+ AR+ R+ YGA +PK G + + Sbjct: 88 AAVTLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 147 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I + Q +++ FF ERR Sbjct: 148 LNHQTAILGSVLAQECGDMLRAFFAERR 175 >gi|227891209|ref|ZP_04009014.1| nucleoside deaminase [Lactobacillus salivarius ATCC 11741] gi|227867083|gb|EEJ74504.1| nucleoside deaminase [Lactobacillus salivarius ATCC 11741] Length = 169 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/139 (38%), Positives = 75/139 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+ AA E+P+G V V + KII R N ++ T HAE+LAI + Sbjct: 14 FMKEALFEAKLAAKIGEVPIGCVIVKDGKIIGRGHNLREHSQNATLHAEMLAIEEANETV 73 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L+VTLEPC MC+ AI +RI +YYGAS+ K G + + +H Sbjct: 74 NSWRLVDTQLFVTLEPCPMCSGAIINSRIPEVYYGASDSKAGTVGTLMNLLEDSRFNHQS 133 Query: 127 EIYPGISEQRSRQIIQDFF 145 + GI E I++DFF Sbjct: 134 FVEKGILENECASILKDFF 152 >gi|283131444|dbj|BAI63444.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae subsp. equisimilis] Length = 183 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 53/149 (35%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 13 LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + ++VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 73 EANAHEGNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDE 132 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + I+Q FF++ R Sbjct: 133 RLNHRVQVERGLLAEDCANIMQTFFRQGR 161 >gi|212550942|ref|YP_002309259.1| cytosine/adenosine deaminase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549180|dbj|BAG83848.1| putative cytosine/adenosine deaminase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 146 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ +M AL EAQ A + E+P+GAV V + +II+R+ N L D TAHAE+ AI Sbjct: 2 LQEDEYYMKQALLEAQKAFEKAEVPIGAVIVSDKRIIARSHNLTETLNDTTAHAEMQAIT 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L LYVT+EPC MCA A++ A+I+R+ YG + K G T Sbjct: 62 AASIALGGKYLTNCVLYVTVEPCPMCAGALAWAQIKRIVYGIKDEK-----RGYHKITPF 116 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ I + S +++ FFK++R Sbjct: 117 ILHPKTKVTSKILAEESGFLMKKFFKDKR 145 >gi|157376253|ref|YP_001474853.1| cytidine/deoxycytidylate deaminase family protein [Shewanella sediminis HAW-EB3] gi|157318627|gb|ABV37725.1| cytidine/deoxycytidylate deaminase family protein [Shewanella sediminis HAW-EB3] Length = 177 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A+ +A A R E+PVGAV V ++K+++ N D +AHAE+ +R R++ Sbjct: 10 FMALAMLQAAEAEARGEVPVGAVLVKDDKVVAVGSNDCIGQHDPSAHAEMQCLREAGRLV 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +R+ RL +GA + K G + +H Sbjct: 70 ENYRLLDTTLYVTLEPCAMCAGAMVHSRVSRLVFGAKDEKTGAAGSVVDLVRHPRFNHQL 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ EQ + + FF+ RR Sbjct: 130 EVNNGVLEQECSEQLSQFFRRRR 152 >gi|300724136|ref|YP_003713453.1| TadA, tRNA -specific adenosine deaminase [Xenorhabdus nematophila ATCC 19061] gi|297630670|emb|CBJ91335.1| TadA, tRNA-specific adenosine deaminase [Xenorhabdus nematophila ATCC 19061] Length = 170 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 53/127 (41%), Positives = 71/127 (55%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 EIPVGA+ V +N+I++ N D TAHAEI+A+R G L L LYVTLEP Sbjct: 32 EIPVGAILVADNEILAEGFNLPITYHDPTAHAEIIALRQGGSRLQNYRLLNTTLYVTLEP 91 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCA A+ +RI+RL YGAS+ K G + +H EI G+ + ++ Sbjct: 92 CVMCAGAMVHSRIKRLVYGASDMKTGAAGSLIDILRHPGMNHQIEIIGGVLAEECSTMLS 151 Query: 143 DFFKERR 149 FFK+RR Sbjct: 152 SFFKQRR 158 >gi|308066929|ref|YP_003868534.1| hypothetical protein PPE_00098 [Paenibacillus polymyxa E681] gi|305856208|gb|ADM67996.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 163 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 75/143 (52%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A++EA A E+P+GAV V +N+II R N D TAHAE++AIR L Sbjct: 6 WMKEAIQEAYKAEALGEVPIGAVIVKDNEIIGRGYNLRETDADPTAHAEMVAIRQASEHL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI +R+ L YG ++PK G +H Sbjct: 66 GAWRLLDCRLYVTLEPCPMCAGAIVQSRVPHLIYGTTDPKAGCAGTLMNLLQEPRFNHCT 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ ++ ++ FF+ R Sbjct: 126 EVNSGVLQEECASLLTSFFRNLR 148 >gi|229513031|ref|ZP_04402497.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae TMA 21] gi|254285542|ref|ZP_04960506.1| zinc-binding domain protein [Vibrio cholerae AM-19226] gi|150424404|gb|EDN16341.1| zinc-binding domain protein [Vibrio cholerae AM-19226] gi|229349924|gb|EEO14878.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae TMA 21] Length = 193 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 72/129 (55%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 + E+PVGAV V + +II+ N + D TAHAEI IR + LS L + LYVTL Sbjct: 45 QGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKALSNYRLLDTTLYVTL 104 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A+ +R++R+ YGA + K G ++ +H + G+ E+ R Sbjct: 105 EPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAAYHYATVEKGLLEEECRAQ 164 Query: 141 IQDFFKERR 149 +Q FF+ RR Sbjct: 165 LQAFFQRRR 173 >gi|229530028|ref|ZP_04419418.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae 12129(1)] gi|229333802|gb|EEN99288.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae 12129(1)] Length = 193 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 72/129 (55%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 + E+PVGAV V + +II+ N + D TAHAEI IR + LS L + LYVTL Sbjct: 45 QGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKALSNYRLLDTTLYVTL 104 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A+ +R++R+ YGA + K G ++ +H + G+ E+ R Sbjct: 105 EPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAAYHYATVEKGLLEEECRAQ 164 Query: 141 IQDFFKERR 149 +Q FF+ RR Sbjct: 165 LQAFFQRRR 173 >gi|23097481|ref|NP_690947.1| hypothetical protein OB0026 [Oceanobacillus iheyensis HTE831] gi|22775704|dbj|BAC11982.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 166 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 53/149 (35%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + +FM+ A+ EA+ A + NE+P+GAV V + +I+ + N ++ HAE+LA++ Sbjct: 7 VSQDELFMAAAIREARRAWILNEVPIGAVIVHDGEIVGKGFNLRESMQATLTHAELLAMQ 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + LYVTLEPC MCA AI +R++R+ YGA +PK G Sbjct: 67 EANNEIGSWRLEDCTLYVTLEPCPMCAGAIVQSRMKRVVYGAPDPKAGCAGTIMNLLNEP 126 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ EQ+ I+++FFKE R Sbjct: 127 RFNHQVEVTSGVLEQQCSTILKEFFKELR 155 >gi|197302614|ref|ZP_03167668.1| hypothetical protein RUMLAC_01343 [Ruminococcus lactaris ATCC 29176] gi|197298196|gb|EDY32742.1| hypothetical protein RUMLAC_01343 [Ruminococcus lactaris ATCC 29176] Length = 180 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 75/143 (52%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL++A+ A E P+G V V KII+R NR K AHAEI AI+ + L Sbjct: 25 YMKEALKQAKKAYALEETPIGCVIVHEGKIIARGYNRRNTDKSPLAHAEISAIKKASKKL 84 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LYVTLEPC MCA AI +RI R+ G NPK G + + +H Sbjct: 85 GDWRLEECTLYVTLEPCQMCAGAIIQSRIPRVVVGCMNPKAGCAGSVLNLLDVQAFNHQA 144 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ + E+ +++ FF+E R Sbjct: 145 EVKTKVLEEECSLMMKQFFRELR 167 >gi|163838825|ref|YP_001623230.1| tRNA-specific adenosine deaminase [Renibacterium salmoninarum ATCC 33209] gi|162952301|gb|ABY21816.1| tRNA-specific adenosine deaminase [Renibacterium salmoninarum ATCC 33209] Length = 161 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL EAQ A ++P+GAV + + ++ NR D TAHAE+LA+R Sbjct: 16 WMGAALVEAQAALQTEDVPIGAVVLDASGNVVGTGRNRREADGDPTAHAEVLALRAAAEA 75 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L VTLEPC MCA AI LA++ R+ +GA + K G + + +H Sbjct: 76 TGSWRLDGCTLVVTLEPCAMCAGAIVLAKVPRVVFGAWDAKAGAAGSVFEILREPRLNHW 135 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+YPG+ E S ++++FF R Sbjct: 136 VEVYPGVREAESAILLREFFAGHR 159 >gi|238750377|ref|ZP_04611878.1| tRNA-specific adenosine deaminase [Yersinia rohdei ATCC 43380] gi|238711308|gb|EEQ03525.1| tRNA-specific adenosine deaminase [Yersinia rohdei ATCC 43380] Length = 195 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/127 (40%), Positives = 72/127 (56%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGA+ VL+N++I NR D TAHAEI+A+R G + + L + LYVTLEP Sbjct: 51 EVPVGAILVLDNQVIGEGWNRPIRNNDPTAHAEIMALRQGGQAVQNYRLIDATLYVTLEP 110 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCA A+ +RIRRL YGA++ K G + +H E+ G+ + + Sbjct: 111 CVMCAGAMVHSRIRRLVYGANDLKTGAAGSLLDILRHPGMNHQIEVCAGVLAESCSHQLS 170 Query: 143 DFFKERR 149 FF+ RR Sbjct: 171 AFFRLRR 177 >gi|159794935|pdb|2NX8|A Chain A, The Crystal Structure Of The Trna-Specific Adenosine Deaminase From Streptococcus Pyogenes Length = 179 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 53/149 (35%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+E++ + + EIP+G V V + +II R N E HAE++AI Sbjct: 13 LEEQTYFMQEALKESEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGASN K GG+++ Q T Sbjct: 73 EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGVDSLYQILTDE 132 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ I+Q FF++ R Sbjct: 133 RLNHRVQVERGLLAADCANIMQTFFRQGR 161 >gi|251783385|ref|YP_002997690.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242392017|dbj|BAH82476.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 175 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 11 FMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEANAHE 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + ++VT+EPC MC+ AI LARI + YGASN K GG ++ Q T +H Sbjct: 71 GNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDERLNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + I+Q FF++ R Sbjct: 131 QVERGLLAEDCANIMQTFFRQGR 153 >gi|158334188|ref|YP_001515360.1| cytidine/deoxycytidylate deaminase region [Acaryochloris marina MBIC11017] gi|158304429|gb|ABW26046.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Acaryochloris marina MBIC11017] Length = 165 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 74/144 (51%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+ A A E+PVGAV + + I+ NR D TAHAEI+A+R ++ Sbjct: 12 WMEKAIALATQAGAAGEVPVGAVIIGPDGDCIAEGENRRERDHDPTAHAEIVALRAASQV 71 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L E LYVTLEPC MCA AI AR+ L YGA +PK G I H Sbjct: 72 IQSWRLHECRLYVTLEPCPMCAGAIIQARLGLLVYGAHDPKTGAIRTVLNLPGSPCSFHK 131 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G+ E RQ +Q++F RR Sbjct: 132 LPVIAGVLEPTCRQQLQEWFARRR 155 >gi|145219369|ref|YP_001130078.1| tRNA-adenosine deaminase [Prosthecochloris vibrioformis DSM 265] gi|145205533|gb|ABP36576.1| tRNA-adenosine deaminase [Chlorobium phaeovibrioides DSM 265] Length = 153 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 79/144 (54%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A EA A E+PVGAV VL+ ++ + N+ L D TAHAE++A+ Sbjct: 8 MELAFREALKAFESREVPVGAV-VLDGGGHVVGKGYNQVEALCDATAHAEMIALTSAMAT 66 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L + L VT+EPC MCA AI A++ R+ +GA + K G + +H Sbjct: 67 LGTKYLQDCTLAVTMEPCPMCAGAIVNAKVGRVVFGAYDAKMGASGSVLNVTGCRPLNHQ 126 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE++ GI E R + ++QDFFKE R Sbjct: 127 PEVFGGIMEGRCQGLLQDFFKELR 150 >gi|309782085|ref|ZP_07676815.1| tRNA-specific adenosine deaminase [Ralstonia sp. 5_7_47FAA] gi|308919151|gb|EFP64818.1| tRNA-specific adenosine deaminase [Ralstonia sp. 5_7_47FAA] Length = 182 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 52/148 (35%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL +A+ A + E+PVGAV V N+I+ N D +AHAE+ A+R Sbjct: 17 ERDGYWMQQALVQAKFAWGQGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LP+ +++VTLEPC MCA A+ AR+ R+ YGA +PK G + + Sbjct: 77 AAEKLGNYRLPDCEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSILDLFAETR 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I + Q +++ FF ERR Sbjct: 137 LNHQTAITGSVLAQECGDMLRAFFAERR 164 >gi|91788312|ref|YP_549264.1| CMP/dCMP deaminase [Polaromonas sp. JS666] gi|91697537|gb|ABE44366.1| CMP/dCMP deaminase, zinc-binding protein [Polaromonas sp. JS666] Length = 461 Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 46/127 (36%), Positives = 75/127 (59%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V + ++I+ N + D TAHAEI+A+R + L L E +L+VTLEP Sbjct: 22 EVPVGAVVVRHGEVIATGRNAPVDANDPTAHAEIVALRAAAQALGNYRLDECELFVTLEP 81 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MC+ A+ AR++R+ +GA++PK G + + + +H G+ + +++Q Sbjct: 82 CAMCSGAMLHARLQRVVFGATDPKTGAAGSVINLFAESRLNHQTGWQGGVLAEECGELLQ 141 Query: 143 DFFKERR 149 FF+ RR Sbjct: 142 AFFRRRR 148 >gi|303258084|ref|ZP_07344092.1| cytidine/deoxycytidylate deaminase family protein [Burkholderiales bacterium 1_1_47] gi|330998703|ref|ZP_08322432.1| cytidine and deoxycytidylate deaminase zinc-binding region [Parasutterella excrementihominis YIT 11859] gi|302859103|gb|EFL82186.1| cytidine/deoxycytidylate deaminase family protein [Burkholderiales bacterium 1_1_47] gi|329576442|gb|EGG57954.1| cytidine and deoxycytidylate deaminase zinc-binding region [Parasutterella excrementihominis YIT 11859] Length = 281 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 78/144 (54%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL EA+ A E+PVGAV V KII R N D + HAEI+A++ + Sbjct: 130 FMREALVEAEKAHQAGEVPVGAVVVDKEGKIIGRGHNLVVAGHDPSGHAEIIALKNASQN 189 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L +YVTLEPC MC+ AI AR+ RL YGA + K G E+ + + +H Sbjct: 190 LKNYRLDNCTIYVTLEPCPMCSGAIIGARLARLVYGAKDQKAGAAESVFKLFDEKRVNHH 249 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E+ +I+Q FF E R Sbjct: 250 TDVTAGVLEEDCLRILQSFFVELR 273 >gi|327483608|gb|AEA78015.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae LMA3894-4] Length = 175 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 72/129 (55%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 + E+PVGAV V + +II+ N + D TAHAEI IR + LS L + LYVTL Sbjct: 27 QGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKALSNYRLLDTTLYVTL 86 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A+ +R++R+ YGA + K G ++ +H + G+ E+ R Sbjct: 87 EPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAAYHYATVEKGLLEEECRAQ 146 Query: 141 IQDFFKERR 149 +Q FF+ RR Sbjct: 147 LQAFFQRRR 155 >gi|261417404|ref|YP_003251087.1| CMP/dCMP deaminase zinc-binding protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373860|gb|ACX76605.1| CMP/dCMP deaminase zinc-binding protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 210 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 75/143 (52%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +AQ A EIP+G V V + +I + N+ +LKD TAHAEI+AI L Sbjct: 55 FMRMALRQAQIAFDMKEIPIGCVIVKDGVVIGKGYNQVEQLKDATAHAEIIAIGTAASTL 114 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA AI +R+ R+ YG+ + + GG T + Sbjct: 115 DNWRLDGCTLYVTLEPCPMCAGAILNSRVSRIVYGSPDSRFGGCGTTIDVITGNALKRAV 174 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI +++ FF++ R Sbjct: 175 EVTGGILADECLGLLKGFFQQMR 197 >gi|229523332|ref|ZP_04412739.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae TM 11079-80] gi|229339695|gb|EEO04710.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae TM 11079-80] Length = 177 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 72/129 (55%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 + E+PVGAV V + +II+ N + D TAHAEI IR + LS L + LYVTL Sbjct: 29 QGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKALSNYRLLDTTLYVTL 88 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A+ +R++R+ YGA + K G ++ +H + G+ E+ R Sbjct: 89 EPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAAYHYATVEKGLLEEECRAQ 148 Query: 141 IQDFFKERR 149 +Q FF+ RR Sbjct: 149 LQAFFQRRR 157 >gi|225873364|ref|YP_002754823.1| cytidine and deoxycytidylate deaminase zinc-binding region [Acidobacterium capsulatum ATCC 51196] gi|225793789|gb|ACO33879.1| cytidine and deoxycytidylate deaminase zinc-binding region [Acidobacterium capsulatum ATCC 51196] Length = 164 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/126 (39%), Positives = 71/126 (56%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAVAV+ I++R NR D TAHAE++ +R + L +LYVTLEPC Sbjct: 39 VPVGAVAVVEGSILARGQNRVLRDVDPTAHAEMVVLRAAAEAIGNYRLTGCELYVTLEPC 98 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA A+ AR+ RL YGAS+PK G + +H EI G+ + ++++ Sbjct: 99 AMCAGAMVHARLARLVYGASDPKAGAAGSVLAVVNHPQLNHQMEITGGVLAEECGTLLRE 158 Query: 144 FFKERR 149 FF+ RR Sbjct: 159 FFRARR 164 >gi|332994184|gb|AEF04239.1| cytidine/deoxycytidylate deaminase family protein [Alteromonas sp. SN2] Length = 180 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 74/149 (49%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K +M AL A A E+PVGA V N ++I N D +AHAE+ A+R Sbjct: 11 MVKHTKWMQHALSLADKAEAMGEVPVGACVVHNGELIGEGWNTPITDSDPSAHAEMNAVR 70 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M + L + LYVTLEPC+MCA + ARI+R+ YGAS+ K G + Sbjct: 71 MAAKHLQNYRTTDATLYVTLEPCSMCAGMLVHARIKRVVYGASDAKTGAAGSEMNILNHP 130 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +H ++ G+ I FFK RR Sbjct: 131 SLNHQVDVISGVLADDCADKISAFFKRRR 159 >gi|283131456|dbj|BAI63455.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae subsp. equisimilis] Length = 183 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 19 FMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNVREESNQAIMHAEMMAINEANAHE 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + ++VT+EPC MC+ AI LARI + YGASN K GG ++ Q T +H Sbjct: 79 GNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDERLNHRV 138 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + I+Q FF++ R Sbjct: 139 QVERGLLAEDCANIMQTFFRQGR 161 >gi|113461754|ref|YP_719823.1| tRNA-adenosine deaminase [Haemophilus somnus 129PT] gi|112823797|gb|ABI25886.1| tRNA-adenosine deaminase [Haemophilus somnus 129PT] Length = 158 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A EIPVGAV V I++ N + D TAHAEI+A+R + L Sbjct: 2 MRYALSLADKAEALGEIPVGAVLVDKQGDILAEGWNLSIIHNDPTAHAEIIALRQAGQKL 61 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPCTMCA AI +RI RL +GA + K G + + F+ +H Sbjct: 62 QNYRLLDTTLYVTLEPCTMCAGAILHSRIGRLVFGAYDYKTGAVGSRFHFFNDYKMNHIL 121 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ ++ Q I FF++RR Sbjct: 122 EITGGVLQEECSQKISVFFQKRR 144 >gi|297737907|emb|CBI27108.3| unnamed protein product [Vitis vinifera] Length = 1151 Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 55/103 (53%), Positives = 65/103 (63%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +FM AL EA+ AA E+PVGAV V + KII+R NR EL+D TAHAE++ IR Sbjct: 948 KIDEMFMREALLEAKKAANAWEVPVGAVLVQHGKIIARGCNRVEELRDSTAHAEMICIRE 1007 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +L L E LYVTLEPC MCA AI ARI L +GA N Sbjct: 1008 ASNLLRTWRLSETTLYVTLEPCPMCAGAILQARIDTLVWGAPN 1050 >gi|237808810|ref|YP_002893250.1| CMP/dCMP deaminase zinc-binding [Tolumonas auensis DSM 9187] gi|237501071|gb|ACQ93664.1| CMP/dCMP deaminase zinc-binding [Tolumonas auensis DSM 9187] Length = 164 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A++ A+ A E+PVGAV VLNN++I N + D AHAEI+AIR + + Sbjct: 10 WMQYAMQLARRAEEAGEVPVGAVLVLNNEVIGEGWNLSICRHDPCAHAEIMAIRQAGQNI 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA A+ +RI RL YGAS+ K G + T +H Sbjct: 70 GNYRLLGATLYVTLEPCIMCAGAMIHSRIERLVYGASDLKTGAAGSVFDVLTDPRHNHIV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI + Q + +FF+ RR Sbjct: 130 SVIGGIEAEACSQQLSNFFRRRR 152 >gi|33152629|ref|NP_873982.1| hypothetical protein HD1591 [Haemophilus ducreyi 35000HP] gi|33148853|gb|AAP96371.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP] Length = 183 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/144 (40%), Positives = 78/144 (54%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A+ A EIPVGAV V + II N+ L D +AHAEILAIR Sbjct: 30 LMQYALTLAKRAETMGEIPVGAVLVDSKGNIIGEGWNQVIALSDPSAHAEILAIRQASHR 89 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + LYVTLEPCTMCA AI +R+ RL +GAS+ K G I + + +H Sbjct: 90 LQNYRLLDCTLYVTLEPCTMCAGAILHSRLSRLVFGASDYKTGAIGSRFHLFEDYKMNHL 149 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ + I +FF+ RR Sbjct: 150 LTVQGGVLKEACSKQISEFFQRRR 173 >gi|298488260|ref|ZP_07006293.1| tRNA-specific adenosine-34 deaminase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157199|gb|EFH98286.1| tRNA-specific adenosine-34 deaminase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 169 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/127 (40%), Positives = 72/127 (56%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V N +II R N D +AHAE++AIR R L L LYVTLEP Sbjct: 31 EVPVGAVVVQNGEIIGRGYNCPISASDPSAHAEMVAIRDAARALDNYRLSGSTLYVTLEP 90 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C+MCA I +R+ R+ YGA PK G +++ QF++ +H G+ + ++ Sbjct: 91 CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRVLFEGGVLGEECGAMLS 150 Query: 143 DFFKERR 149 +FF+ RR Sbjct: 151 EFFRMRR 157 >gi|241662996|ref|YP_002981356.1| CMP/dCMP deaminase zinc-binding [Ralstonia pickettii 12D] gi|240865023|gb|ACS62684.1| CMP/dCMP deaminase zinc-binding [Ralstonia pickettii 12D] Length = 182 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 52/148 (35%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL +A+ A + E+PVGAV V N+I+ N D +AHAE+ A+R Sbjct: 17 ERDGYWMQQALVQAKFAWGQGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LP+ +++VTLEPC MCA A+ AR+ R+ YGA +PK G + + Sbjct: 77 AAEKLGNYRLPDCEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSILDLFAETR 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I + Q +++ FF ERR Sbjct: 137 LNHQTAITGSVLAQECGDMLRAFFAERR 164 >gi|330813628|ref|YP_004357867.1| tRNA-specific adenosine-34 deaminase [Candidatus Pelagibacter sp. IMCC9063] gi|327486723|gb|AEA81128.1| tRNA-specific adenosine-34 deaminase [Candidatus Pelagibacter sp. IMCC9063] Length = 129 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 76/128 (59%), Gaps = 2/128 (1%) Query: 24 IPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 +PV A+ V + KII+RA N + KD AHAEIL IR + L+++ L +D+Y +LE Sbjct: 1 MPVSAIIVDPKSKKIIARAHNLSIRNKDPLAHAEILVIRKALKFLNKKRLDGMDIYCSLE 60 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC +AI+ +++R +Y+ A + GG+ NG + + Y G E + +I+ Sbjct: 61 PCVMCTSAIAFSQLRNIYFCAEDKASGGLINGPKLGFSKYLKYKFSFYYGFEENKFSKIL 120 Query: 142 QDFFKERR 149 DFFK++R Sbjct: 121 VDFFKQKR 128 >gi|225569894|ref|ZP_03778919.1| hypothetical protein CLOHYLEM_05989 [Clostridium hylemonae DSM 15053] gi|225161364|gb|EEG73983.1| hypothetical protein CLOHYLEM_05989 [Clostridium hylemonae DSM 15053] Length = 159 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 72/143 (50%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+++A A NE P+G V V +II R NR K+ AHAEI AIR R + Sbjct: 8 FMKEAIKQAGKAYALNETPIGCVIVYEGRIIGRGYNRRNTDKNTLAHAEITAIRKASRKM 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA AI +R+ R+ G NPK G + +H Sbjct: 68 GDWRLEGCTLYVTLEPCPMCAGAIVQSRMDRVVVGCMNPKAGCAGSVLNVLQTEGFNHQT 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ +++ FF+E R Sbjct: 128 ELTTGVCGGECSSMMKSFFRELR 150 >gi|187928419|ref|YP_001898906.1| CMP/dCMP deaminase zinc-binding [Ralstonia pickettii 12J] gi|187725309|gb|ACD26474.1| CMP/dCMP deaminase zinc-binding [Ralstonia pickettii 12J] Length = 182 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 52/148 (35%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL +A+ A + E+PVGAV V N+I+ N D +AHAE+ A+R Sbjct: 17 ERDGYWMQQALVQAKFAWGQGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LP+ +++VTLEPC MCA A+ AR+ R+ YGA +PK G + + Sbjct: 77 AAEKLGNYRLPDCEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSILDLFAETR 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I + Q +++ FF ERR Sbjct: 137 LNHQTAITGSVLAQECGDMLRAFFAERR 164 >gi|210623915|ref|ZP_03294124.1| hypothetical protein CLOHIR_02076 [Clostridium hiranonis DSM 13275] gi|210153279|gb|EEA84285.1| hypothetical protein CLOHIR_02076 [Clostridium hiranonis DSM 13275] Length = 371 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 74/149 (49%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM AL EA+ A + E P+GAV V + +II R N LKD TAH+EILAI+ Sbjct: 223 MSDDEYFMMEALREAKKAYDKEETPIGAVIVKDGEIIGRGHNLTEHLKDATAHSEILAIK 282 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L +YVT+EPC MC AI +RIR + GA K IE + F Sbjct: 283 NAAKKLKGWRLFGCKMYVTMEPCVMCCGAIVNSRIREVVIGAKRVKNAKIEKQSDFKKEY 342 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 E G+ E+ ++ FFK R Sbjct: 343 FEDSKVEYKYGVLEEECAGMLGSFFKRLR 371 >gi|220905293|ref|YP_002480605.1| CMP/dCMP deaminase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869592|gb|ACL49927.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 195 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 82/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL+ A++AA E+PVGAV V + ++++ GN L D TAHAEILA+R ++ Sbjct: 44 LMDRALDRARHAAALGEVPVGAVLVAPDGRVLAEEGNAPVALSDPTAHAEILALRRAGQM 103 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L L VTLEPC MCAAA AR+ L YGA++ G + + +++ + +HS Sbjct: 104 LGNYRLGGCVLVVTLEPCAMCAAACIHARLAGLVYGAADDLAGAVVSRAEYFDAQSANHS 163 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 G+ + +++DFF RR Sbjct: 164 LWHMGGVRGEECATLLRDFFAVRR 187 >gi|190574881|ref|YP_001972726.1| putative cytidine and deoxycytidylate deaminase [Stenotrophomonas maltophilia K279a] gi|190012803|emb|CAQ46432.1| putative cytidine and deoxycytidylate deaminase [Stenotrophomonas maltophilia K279a] Length = 174 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/145 (39%), Positives = 83/145 (57%), Gaps = 2/145 (1%) Query: 7 FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL A+ A +EIPVGAV V + +++ N N D +AHAEI+A+R G + Sbjct: 16 WMRHALALAERAQREFDEIPVGAVLVGADGQLLGEGWNLNIASHDPSAHAEIVAMRAGGK 75 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 +L+ L LYVTLEPC MCA AI AR+ RL YGAS+PK G + A +H Sbjct: 76 LLANHRLLGSTLYVTLEPCAMCAMAIVHARVSRLVYGASDPKTGACGSVFDLLGDARHNH 135 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 EI+ G+ + + + ++F+ +R Sbjct: 136 RVEIHGGVLAKEASTRLTNYFRAKR 160 >gi|295103971|emb|CBL01515.1| tRNA-adenosine deaminase [Faecalibacterium prausnitzii SL3/3] Length = 166 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 1/126 (0%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV + ++I+ A N K+ HAE+LAI C+ L L E +L+VTLEPC Sbjct: 23 VPVGAVVARHGEVIATAHNTRETEKNALHHAELLAIDAACKALGGWRLWECELFVTLEPC 82 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA I +R+RR+ YGA++ K G + T + L HH P + G+ E ++Q++Q Sbjct: 83 PMCAGGIINSRLRRVVYGAADTKAGCCGSVTDLFALPFNHH-PVVEKGLREAEAQQLLQA 141 Query: 144 FFKERR 149 FF R Sbjct: 142 FFVSLR 147 >gi|332305596|ref|YP_004433447.1| CMP/dCMP deaminase zinc-binding protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172925|gb|AEE22179.1| CMP/dCMP deaminase zinc-binding protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 162 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ ++M AL A AA EIPVGAV V + ++I N++ L D +AHAE+ AIR Sbjct: 3 LEQDQLWMRHALALATKAADAGEIPVGAVLVKDQQVIGEGWNQSIMLNDPSAHAEMQAIR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L LYVTLEPCTMCA + +RI RL +GA + K G + Sbjct: 63 QAGEFIQNYRLIGTTLYVTLEPCTMCAGLLVHSRIERLVFGAHDAKTGAAGSIMDVLRDT 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ + I FF++RR Sbjct: 123 RLNHQVEVVGGVLGEQCGETISAFFRKRR 151 >gi|120602647|ref|YP_967047.1| CMP/dCMP deaminase, zinc-binding [Desulfovibrio vulgaris DP4] gi|120562876|gb|ABM28620.1| tRNA-adenosine deaminase [Desulfovibrio vulgaris DP4] Length = 161 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL EA+ A E+PVGAV V +II R NR D +AHAE++A+RM Sbjct: 16 LMDEALAEARLAQAEGEVPVGAVVVDKAGRIIGRGHNRCLRDNDPSAHAEMVALRMAATT 75 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L L VTLEPC MCA AI AR+ + YGA +PK G + + + + +H Sbjct: 76 TANYRLGGTFLVVTLEPCLMCAGAIVHARVEGVVYGAEDPKAGAVTSCLEAFEQPFLNHR 135 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P G+ + I++DFF RR Sbjct: 136 PWHMGGVRRRACTAILKDFFNGRR 159 >gi|260909419|ref|ZP_05916126.1| cytidine/deoxycytidylate deaminase [Prevotella sp. oral taxon 472 str. F0295] gi|260636435|gb|EEX54418.1| cytidine/deoxycytidylate deaminase [Prevotella sp. oral taxon 472 str. F0295] Length = 155 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 5/128 (3%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+P+GAV ++++RA N L DVTAHAE+ AI +L + LPE LYVT+E Sbjct: 32 GEVPIGAVIACKGRVVARAHNLTETLCDVTAHAEMQAITAAANMLGGKYLPECTLYVTVE 91 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA A A++ R+ YG + K G + + H + G+ E+ RQ++ Sbjct: 92 PCPMCAGACGWAQLGRIVYGTRDEK-----RGYERFAPNVLHAKATVTAGVLEEECRQLM 146 Query: 142 QDFFKERR 149 +DFF R Sbjct: 147 KDFFSGLR 154 >gi|295694717|ref|YP_003587955.1| CMP/dCMP deaminase zinc-binding protein [Bacillus tusciae DSM 2912] gi|295410319|gb|ADG04811.1| CMP/dCMP deaminase zinc-binding protein [Bacillus tusciae DSM 2912] Length = 174 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+ A A E+P+GAV V KI+ N D TAHAE++A+R + + Sbjct: 10 YMERALQLAAYAGEMGEVPIGAVVVAGGKILGEGCNLREMWNDPTAHAEMVALRQAAQAV 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MC A LAR+ R+ +GA +PK G + Q A +H Sbjct: 70 GGWRLSGTTLYVTLEPCAMCVGAAVLARVERVVFGAPDPKAGACGSVLQVAD-APLNHRL 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ +Q +++ FF+E R Sbjct: 129 KVEGGVLQQSCSHLLKQFFRELR 151 >gi|114798136|ref|YP_761455.1| cytidine/deoxycytidylate deaminase family protein [Hyphomonas neptunium ATCC 15444] gi|114738310|gb|ABI76435.1| cytidine/deoxycytidylate deaminase family protein [Hyphomonas neptunium ATCC 15444] Length = 146 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/145 (43%), Positives = 87/145 (60%), Gaps = 3/145 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ A+E A+ AA E+PVGAV V +I+ NR D +AHAEI+AIR + Sbjct: 1 MARAMELAREAAKAGEVPVGAVVVDPETGEIVGEGYNRPVGTHDPSAHAEIIAIRAAAQK 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L +DL+VTLEPC MCA AIS ARI RL + A++ KGG + +G +F+ TCH Sbjct: 61 LGNYRLTGLDLHVTLEPCAMCAGAISFARIGRLVFAAADIKGGAVMSGPRFFEQPTCHWR 120 Query: 126 PEI-YPGISEQRSRQIIQDFFKERR 149 PE + E + +++DFF+ RR Sbjct: 121 PEWRQDALHEAEAADLLRDFFRTRR 145 >gi|11068000|gb|AAG28837.1| cytosine deaminase [Bifidobacterium longum] Length = 143 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 76/144 (52%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M CALE A AA ++PVGAV VL+ +I+ R N D AHAEI+A+R + Sbjct: 1 MRCALELAGQAAAAGDVPVGAV-VLDAAGQIVGRGYNTREADGDPLAHAEIIAMRQAAQA 59 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + L VTLEPC MCA A I + +GA +PK G + HS Sbjct: 60 LGAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRDPHIGHS 119 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE++ G+ E + I+ DFF +RR Sbjct: 120 PEVHGGVLEGECQSILTDFFAQRR 143 >gi|15221490|ref|NP_177039.1| TADA (TRNA ARGININE ADENOSINE DEAMINASE); catalytic/ hydrolase/ zinc ion binding [Arabidopsis thaliana] gi|75336834|sp|Q9S7I0|TADA_ARATH RecName: Full=tRNA-specific adenosine deaminase, chloroplastic; Short=TADA; Flags: Precursor gi|5734706|gb|AAD49971.1|AC008075_4 Contains similarity to gi|3329316 cytosine deaminase from Chlamydia trachomatis genome gb|AE001357 and contains a PF|00383 cytidine deaminase zinc-binding region. EST gb|W43306 comes from this gene [Arabidopsis thaliana] gi|12324145|gb|AAG52046.1|AC011914_16 unknown protein; 92941-88668 [Arabidopsis thaliana] gi|332196710|gb|AEE34831.1| tRNA-specific adenosine deaminase [Arabidopsis thaliana] Length = 1307 Score = 95.1 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 67/162 (41%), Positives = 85/162 (52%), Gaps = 20/162 (12%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FM AL EA+ AA E+PVGAV V + KII+R N EL+D TAHAE++ IR G + Sbjct: 1112 IFMREALVEAKKAADTWEVPVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREGSKA 1171 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN-------------PKGGGIEN 112 L L + LYVTLEPC MCA AI AR+ L +GA N P G G N Sbjct: 1172 LRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGAPNKLLGADGSWIRLFPGGEG--N 1229 Query: 113 GTQ-----FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G++ + H I G+ E Q +Q FF+ RR Sbjct: 1230 GSEASEKPPPPVHPFHPKMTIRRGVLESECAQTMQQFFQLRR 1271 >gi|212703407|ref|ZP_03311535.1| hypothetical protein DESPIG_01450 [Desulfovibrio piger ATCC 29098] gi|212673152|gb|EEB33635.1| hypothetical protein DESPIG_01450 [Desulfovibrio piger ATCC 29098] Length = 144 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA+ AA +E+PVGAV V + ++++RA NR L D TAHAEILA+R Sbjct: 1 MRLALDEARQAAREDEVPVGAVLVAADGRLLARAHNRPVALHDPTAHAEILALRAAGAAS 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPC MCAAA+ AR+ + YGA++ G + + T+ +H Sbjct: 61 GNYRLGGGVLVVTLEPCAMCAAALVHARLAGVVYGAADRLAGAVTSCTETLDQPFFNHRV 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ + S ++QDFF RR Sbjct: 121 WHMGGVLARESVDLLQDFFAGRR 143 >gi|312796599|ref|YP_004029521.1| tRNA-specific adenosine deaminase [Burkholderia rhizoxinica HKI 454] gi|312168374|emb|CBW75377.1| tRNA-specific adenosine deaminase (EC 3.5.4.-) [Burkholderia rhizoxinica HKI 454] Length = 173 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 72/128 (56%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I++ N+ D +AHAE++A+R + LS +P +LYVTLE Sbjct: 33 GEVPVGAVVVRGDEVIAQGFNQPISTHDPSAHAEMVALRAAAQSLSNYRMPGCELYVTLE 92 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI ARI R+ +GA +PK G + ++ +H + G+ + Sbjct: 93 PCLMCAGAIMHARIARVVFGAHDPKTGACGSVVDVFSQPRLNHHTSVVGGVLADECSHEL 152 Query: 142 QDFFKERR 149 FF ERR Sbjct: 153 SQFFVERR 160 >gi|255546921|ref|XP_002514518.1| conserved hypothetical protein [Ricinus communis] gi|223546122|gb|EEF47624.1| conserved hypothetical protein [Ricinus communis] Length = 1624 Score = 95.1 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 67/166 (40%), Positives = 86/166 (51%), Gaps = 19/166 (11%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +FM AL EA+ AA E+PVGAV V + KII+R N EL+D TAHAE++ IR Sbjct: 1098 KIDEMFMREALLEAKKAADTWEVPVGAVLVQHGKIIARGYNLVEELRDSTAHAEMICIRE 1157 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN-------------PKGG 108 L L E LYVTLEPC MCA AI ARI + +GA N P GG Sbjct: 1158 ASNQLRSWRLAETTLYVTLEPCPMCAGAILQARIDTVVWGAPNKLLGADGSWIRLFPNGG 1217 Query: 109 GIENGTQFYT-----LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G +G++ + H + +I GI ++Q FF+ RR Sbjct: 1218 G-GSGSELVDKPPAPVHPFHPNMKIRRGILAPECADVMQQFFQLRR 1262 >gi|50913560|ref|YP_059532.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS10394] gi|71902843|ref|YP_279646.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS6180] gi|94987813|ref|YP_595914.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS9429] gi|94989691|ref|YP_597791.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS10270] gi|94991689|ref|YP_599788.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS2096] gi|94993570|ref|YP_601668.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS10750] gi|306828137|ref|ZP_07461400.1| cytidine/deoxycytidylate deaminase [Streptococcus pyogenes ATCC 10782] gi|50902634|gb|AAT86349.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS10394] gi|71801938|gb|AAX71291.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS6180] gi|94541321|gb|ABF31370.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS9429] gi|94543199|gb|ABF33247.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS10270] gi|94545197|gb|ABF35244.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS2096] gi|94547078|gb|ABF37124.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS10750] gi|304429674|gb|EFM32720.1| cytidine/deoxycytidylate deaminase [Streptococcus pyogenes ATCC 10782] Length = 179 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 13 LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 73 EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 132 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ I+Q FF++ R Sbjct: 133 RLNHRVQVERGLLAADCANIMQTFFRQGR 161 >gi|296104233|ref|YP_003614379.1| tRNA-specific adenosine deaminase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058692|gb|ADF63430.1| tRNA-specific adenosine deaminase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 168 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 75/143 (52%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G +L Sbjct: 11 WMRHALTLARRAWDEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MC+ A+ +RI L +GA + K G + +H Sbjct: 71 QNYRLLDTTLYVTLEPCVMCSGAMVHSRIGTLVFGARDEKTGAAGSLMDVLGHPGMNHQV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ DFF+ RR Sbjct: 131 KTIGGVLAPECSGLLSDFFRMRR 153 >gi|28209851|ref|NP_780795.1| cytosine deaminase [Clostridium tetani E88] gi|28202286|gb|AAO34732.1| cytosine deaminase [Clostridium tetani E88] Length = 146 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/146 (40%), Positives = 82/146 (56%), Gaps = 7/146 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA+ A NE+P+GAV V NKII R N + K+ AHAEI+AIR C+ + Sbjct: 5 FMKEAVLEARKALNINEVPIGAVIVKENKIIGRGHNLVEKSKNPLAHAEIIAIREACKSI 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFYTLATCH 123 + L +YVTLEPC MCA AI +R+ ++Y G +P G I N TQ L T Sbjct: 65 NNWRLNGCHMYVTLEPCPMCAGAIIRSRMDKVYIGTFDPNSGACGTIINLTQNKYLNTNI 124 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 + +Y ++ S +++ FF RR Sbjct: 125 NINWLY----DEESSTLLKKFFYSRR 146 >gi|26450841|dbj|BAC42528.1| putative deaminase [Arabidopsis thaliana] gi|38564244|gb|AAR23701.1| At1g68720 [Arabidopsis thaliana] Length = 1307 Score = 95.1 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 67/162 (41%), Positives = 85/162 (52%), Gaps = 20/162 (12%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FM AL EA+ AA E+PVGAV V + KII+R N EL+D TAHAE++ IR G + Sbjct: 1112 IFMREALVEAKKAADTWEVPVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREGSKA 1171 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN-------------PKGGGIEN 112 L L + LYVTLEPC MCA AI AR+ L +GA N P G G N Sbjct: 1172 LRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGAPNKLLGADGSWIRLFPGGEG--N 1229 Query: 113 GTQ-----FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G++ + H I G+ E Q +Q FF+ RR Sbjct: 1230 GSEASEKPPPPVHPFHPKMTIRRGVLESECAQTMQQFFQLRR 1271 >gi|19745357|ref|NP_606493.1| hypothetical protein spyM18_0196 [Streptococcus pyogenes MGAS8232] gi|73921072|sp|Q8P2R7|Y196_STRP8 RecName: Full=Uncharacterized deaminase spyM18_0196 gi|19747462|gb|AAL96992.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] Length = 159 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 5 LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 65 EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ I+Q FF++ R Sbjct: 125 RLNHRVQVERGLLAADCANIMQTFFRQGR 153 >gi|209558752|ref|YP_002285224.1| Cytosine deaminase [Streptococcus pyogenes NZ131] gi|209539953|gb|ACI60529.1| Cytosine deaminase [Streptococcus pyogenes NZ131] Length = 171 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 5 LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 65 EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ I+Q FF++ R Sbjct: 125 RLNHRVQVERGLLAADCANIMQTFFRQGR 153 >gi|300704191|ref|YP_003745793.1| tRNA-specific adenosine deaminase [Ralstonia solanacearum CFBP2957] gi|299071854|emb|CBJ43182.1| tRNA-specific adenosine deaminase [Ralstonia solanacearum CFBP2957] Length = 183 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 52/148 (35%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL +A+ A E+PVGAV V N+I+ N D +AHAE+ A+R Sbjct: 17 ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LPE +++VTLEPC MCA A+ AR+ R+ YGA +PK G + + Sbjct: 77 AAVTLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + + Q +++ FF ERR Sbjct: 137 LNHQTAMLGSVLAQECGDMLRAFFAERR 164 >gi|229823590|ref|ZP_04449659.1| hypothetical protein GCWU000282_00889 [Catonella morbi ATCC 51271] gi|229787034|gb|EEP23148.1| hypothetical protein GCWU000282_00889 [Catonella morbi ATCC 51271] Length = 178 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALE A A E+P+GA+ V + +++ A N TAHAE+LAI + L Sbjct: 18 WMQQALELADQAQALGEVPIGALLVKDGVLLASAYNLREVNHQATAHAELLAIEAANQAL 77 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA A+ L+R+ ++ YGAS+PKGG + + +H P Sbjct: 78 GAWRLEGCTLYVTLEPCPMCAGALVLSRVDQVVYGASDPKGGCAGSLMNLLEDSRFNHQP 137 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E + +++FF+ R Sbjct: 138 QVIRGVLEAQCSDKLKNFFQGLR 160 >gi|218132702|ref|ZP_03461506.1| hypothetical protein BACPEC_00563 [Bacteroides pectinophilus ATCC 43243] gi|217992428|gb|EEC58431.1| hypothetical protein BACPEC_00563 [Bacteroides pectinophilus ATCC 43243] Length = 160 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 75/143 (52%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+++A+ A E P+G V V NKII+R NR K HAEI AIR +++ Sbjct: 12 YMKEAIKQARKAYKIGESPIGCVIVYQNKIIARGYNRRNIDKTTLGHAEITAIRKASKVI 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + +YVTLEPC MCA AI ARI R+ GA NPK G + + +H Sbjct: 72 GDWRLEDCTIYVTLEPCQMCAGAIVQARIPRVVIGAMNPKAGCAGSVLNLLEIPQFNHQC 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ ++ FF+E R Sbjct: 132 DVERGVLADECSGLMSSFFRELR 154 >gi|21909689|ref|NP_663957.1| putative cytidine/deoxycytidylate deaminase family protein [Streptococcus pyogenes MGAS315] gi|56807966|ref|ZP_00365780.1| COG0590: Cytosine/adenosine deaminases [Streptococcus pyogenes M49 591] gi|73921034|sp|Q8K8Q9|TADA_STRP3 RecName: Full=tRNA-specific adenosine deaminase gi|73921083|sp|Q5XE14|TADA_STRP6 RecName: Full=tRNA-specific adenosine deaminase gi|21903872|gb|AAM78760.1| putative cytidine/deoxycytidylate deaminase family protein [Streptococcus pyogenes MGAS315] Length = 171 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 5 LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 65 EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ I+Q FF++ R Sbjct: 125 RLNHRVQVERGLLAADCANIMQTFFRQGR 153 >gi|291614449|ref|YP_003524606.1| CMP/dCMP deaminase zinc-binding protein [Sideroxydans lithotrophicus ES-1] gi|291584561|gb|ADE12219.1| CMP/dCMP deaminase zinc-binding protein [Sideroxydans lithotrophicus ES-1] Length = 148 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 52/142 (36%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+ A+ AA E+PVGAV V + II N D +AHAEI A+R + + Sbjct: 1 MRAALDLARQAAQAGEVPVGAVVVRDGLIIGHGCNAPISRHDPSAHAEIAALRDAAQHIG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + +L+VTLEPC MC A+ ARI R+ +GA +PK G + + +H Sbjct: 61 NYRLVDCELFVTLEPCVMCVGAMFHARIARVVFGAQDPKTGAAGSVFNLFNETRLNHHAR 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I+ G+ + +++ DFF RR Sbjct: 121 IHGGVLAEECGKVLSDFFAMRR 142 >gi|160942564|ref|ZP_02089811.1| hypothetical protein FAEPRAM212_00039 [Faecalibacterium prausnitzii M21/2] gi|158446148|gb|EDP23151.1| hypothetical protein FAEPRAM212_00039 [Faecalibacterium prausnitzii M21/2] Length = 169 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 1/126 (0%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV + ++++ A N K+ HAE+LAI C+ L L E +L+VTLEPC Sbjct: 26 VPVGAVVARHGEVVATAHNTRETEKNALHHAELLAIDAACKALGGWRLWECELFVTLEPC 85 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA I +R+RR+ YGA++ K G + T + L HH P + G+ E ++Q++Q Sbjct: 86 PMCAGGIINSRLRRVVYGAADTKAGCCGSVTDLFALPFNHH-PVVEKGLREAEAQQLLQA 144 Query: 144 FFKERR 149 FF R Sbjct: 145 FFVSLR 150 >gi|15676827|ref|NP_273972.1| cytidine and deoxycytidylate deaminase family protein [Neisseria meningitidis MC58] gi|7226171|gb|AAF41340.1| cytidine and deoxycytidylate deaminase family protein [Neisseria meningitidis MC58] gi|316985330|gb|EFV64279.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Neisseria meningitidis H44/76] gi|325140176|gb|EGC62703.1| tRNA-specific adenosine deaminase [Neisseria meningitidis CU385] gi|325200381|gb|ADY95836.1| tRNA-specific adenosine deaminase [Neisseria meningitidis H44/76] Length = 239 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ ++ EIPVGAV V + KII+ A N +V+ HAEI A+ R + Sbjct: 95 FMCEALRQAEQSSADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGREI 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237 >gi|254281607|ref|ZP_04956575.1| tRNA-specific adenosine deaminase [gamma proteobacterium NOR51-B] gi|219677810|gb|EED34159.1| tRNA-specific adenosine deaminase [gamma proteobacterium NOR51-B] Length = 164 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 53/104 (50%), Positives = 65/104 (62%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 MS ALE+A AA + E+PVGAV V++ K+++ AGN D TAHAEILA+R R + Sbjct: 11 MMSLALEKAAMAAAQGEVPVGAVVVMDGKVVATAGNGQIGDCDPTAHAEILALRDAARAI 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 L LY TLEPCTMC A+ ARI RL YGA PK G + Sbjct: 71 RNYRLAGATLYATLEPCTMCCGALVHARIGRLVYGALEPKAGAV 114 >gi|325134098|gb|EGC56751.1| tRNA-specific adenosine deaminase [Neisseria meningitidis M13399] gi|325206234|gb|ADZ01687.1| tRNA-specific adenosine deaminase [Neisseria meningitidis M04-240196] Length = 163 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ + Sbjct: 19 FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSCHAEINALAQAGSEM 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 79 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 138 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 139 AIRGGILQEECRAVLNRFFQNKR 161 >gi|322692072|ref|YP_004221642.1| cytidine/deoxycytidine deaminase [Bifidobacterium longum subsp. longum JCM 1217] gi|320456928|dbj|BAJ67550.1| putative cytidine/deoxycytidine deaminase [Bifidobacterium longum subsp. longum JCM 1217] Length = 149 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 76/144 (52%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M CALE A AA ++PVGAV VL+ +I+ R N D AHAEI+A+R + Sbjct: 7 MRCALELAGQAAAAGDVPVGAV-VLDAAGQIVGRGYNTREADGDPLAHAEIIAMRQAAQA 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + L VTLEPC MCA A I + +GA +PK G + HS Sbjct: 66 LGAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRDPHIGHS 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE++ G+ E + I+ DFF +RR Sbjct: 126 PEVHGGVLEGECQSILTDFFAQRR 149 >gi|153216547|ref|ZP_01950510.1| zinc-binding domain protein [Vibrio cholerae 1587] gi|124114222|gb|EAY33042.1| zinc-binding domain protein [Vibrio cholerae 1587] Length = 193 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 72/129 (55%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 + E+PVGAV V + +II+ N + D TAHAEI IR + LS L + LYVTL Sbjct: 45 QGEVPVGAVLVRDGEIIAEGCNGSITNHDATAHAEIEVIRKAGKALSNYRLLDTTLYVTL 104 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A+ +R++R+ YGA + K G ++ +H + G+ E+ R Sbjct: 105 EPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAAYHYATVEKGLLEEECRAQ 164 Query: 141 IQDFFKERR 149 +Q FF+ RR Sbjct: 165 LQAFFQRRR 173 >gi|288818013|ref|YP_003432360.1| tRNA-specific adenosine deaminase [Hydrogenobacter thermophilus TK-6] gi|288787412|dbj|BAI69159.1| tRNA-specific adenosine deaminase [Hydrogenobacter thermophilus TK-6] gi|308751614|gb|ADO45097.1| CMP/dCMP deaminase zinc-binding protein [Hydrogenobacter thermophilus TK-6] Length = 149 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ L A+ A R E PVG V V + K+I++A NR ELKD TAHAE+LA+R + Sbjct: 4 FIELCLNLARRAYERGETPVGCVVVKDGKVIAKAHNRVEELKDPTAHAEMLALREASESM 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L ++YV+LEPC MC A+ L R+ RL + A + + GG+ + HH Sbjct: 64 GGKYLYGCEIYVSLEPCVMCTYAMILKRVERLIFLAQDYRHGGVMSMYSLLDDMRFHHRV 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + + + ++++++DFF+ R Sbjct: 124 R-WEYMPVEEAQKLLRDFFRNLR 145 >gi|46579939|ref|YP_010747.1| cytidine/deoxycytidylate deaminase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|46449355|gb|AAS96006.1| cytidine/deoxycytidylate deaminase family protein [Desulfovibrio vulgaris str. Hildenborough] Length = 161 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL EA+ A E+PVGAV V +II R NR D +AHAE++A+RM Sbjct: 16 LMDEALAEARLAQAEGEVPVGAVVVDKAGRIIGRGHNRCLRDNDPSAHAEMVALRMAATT 75 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L L VTLEPC MCA AI AR+ + YGA +PK G + + + + +H Sbjct: 76 TANYRLGGTFLVVTLEPCLMCAGAIVHARVEGVVYGAEDPKAGAVTSCLEAFEQPFLNHR 135 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P G+ + I++DFF RR Sbjct: 136 PWHMGGLRRRACTAILKDFFNGRR 159 >gi|325204006|gb|ADY99459.1| tRNA-specific adenosine deaminase [Neisseria meningitidis M01-240355] Length = 239 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ ++ EIPVGAV V + KII+ A N +V+ HAEI A+ R + Sbjct: 95 FMCEALRQAEQSSADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGREI 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237 >gi|72381983|ref|YP_291338.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. NATL2A] gi|72001833|gb|AAZ57635.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. NATL2A] Length = 155 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 79/144 (54%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ L +A+ R E+P+ AV +L+ K I GNR +KD HAE++A+R I Sbjct: 1 MTRLLTKARLVGERGEVPIAAV-ILDKKGRCIGYGGNRRESMKDPLGHAELVALRQASWI 59 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + + L V LEPC MCA A+ AR+ ++ YG+ +PK G + + HH Sbjct: 60 KNDWRFNDCTLIVNLEPCPMCAGALIQARMGKIIYGSEDPKRGALGGTINLAEHKSAHHR 119 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 I GI E+ SR+II D+FK++R Sbjct: 120 MLIERGIMEEESRKIIVDWFKDKR 143 >gi|254479893|ref|ZP_05093141.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [marine gamma proteobacterium HTCC2148] gi|214039455|gb|EEB80114.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [marine gamma proteobacterium HTCC2148] Length = 153 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A A E+P+GAV V + +++ N KD TAHAE++A+R ++ Sbjct: 10 WMRRALALADRAGNEGEVPIGAVIVKDGQLLGEGWNSVIAFKDPTAHAEVVAMRDAAQMT 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP +YVTLEPCTMCA A+ AR+ L + A PK G + + +H Sbjct: 70 GNYRLPGSTVYVTLEPCTMCAGAMIHARVAELVFAAKEPKAGVVCSTCSLLDEPRYNHRI 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ + SR+ +Q FF+ERR Sbjct: 130 RWQGGVLAEMSRERLQAFFRERR 152 >gi|297205021|ref|ZP_06922417.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii JV-V16] gi|297149599|gb|EFH29896.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii JV-V16] Length = 174 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 79/131 (60%), Gaps = 3/131 (2%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYV 78 ++E+P+GA+ V ++I R NR REL +V T HAEILAI C+ L+ L + L+V Sbjct: 24 QDEVPIGAIVVDPKGQVIGRGYNR-RELDNVATHHAEILAINEACKTLNSWRLIDCSLFV 82 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 TLEPC MCA AI AR++ ++YGA + K G + + + +H P++ G+ ++ Sbjct: 83 TLEPCAMCAGAIINARLKEVFYGAPDHKAGASGSVVDLFAVEKFNHHPQVIRGLYRDKAS 142 Query: 139 QIIQDFFKERR 149 ++ +FF+ R Sbjct: 143 SMLTNFFRTIR 153 >gi|225387328|ref|ZP_03757092.1| hypothetical protein CLOSTASPAR_01081 [Clostridium asparagiforme DSM 15981] gi|225046577|gb|EEG56823.1| hypothetical protein CLOSTASPAR_01081 [Clostridium asparagiforme DSM 15981] Length = 162 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ +A+ A+ E+P+G V V +KII+R NR ++V +HAEI+AIR C+ + Sbjct: 7 YMKEAVRQAKKASALGEVPIGCVIVYEDKIIARGYNRRMVDQNVLSHAEIIAIRKACKKM 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA AI AR+ ++ G NPK G + +H Sbjct: 67 GDWRLENCTLYVTLEPCPMCAGAIVQARVPQVVIGCMNPKAGCAGSVLDMLHEDGFNHQV 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E GI + ++++FF+ R Sbjct: 127 ETKIGILGEECSAMMKEFFRALR 149 >gi|167748009|ref|ZP_02420136.1| hypothetical protein ANACAC_02746 [Anaerostipes caccae DSM 14662] gi|167652586|gb|EDR96715.1| hypothetical protein ANACAC_02746 [Anaerostipes caccae DSM 14662] Length = 152 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 56/149 (37%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM A+++A+ AA ++P+G V VL+ KII+RA N+ + K AHAE+LAI Sbjct: 1 MNENEKFMKEAIKQAKKAAAIGDVPIGCVIVLDGKIIARAYNQRNKRKTTLAHAELLAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L E +Y+TLEPC MCA AI ARI ++ GA NPK G + Sbjct: 61 KASKKTGDWRLEECTMYITLEPCQMCAGAIVQARIPKVVIGAMNPKAGCAGSILNILQRE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + ++ DFF++ R Sbjct: 121 EFNHQAEIESGVLREECSHMMSDFFRQLR 149 >gi|284028320|ref|YP_003378251.1| CMP/dCMP deaminase zinc-binding protein [Kribbella flavida DSM 17836] gi|283807613|gb|ADB29452.1| CMP/dCMP deaminase zinc-binding protein [Kribbella flavida DSM 17836] Length = 144 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 76/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA++A ++P+GAV V ++I R N D TAHAE+LAIR R + Sbjct: 1 MELALAEAEHARGSADVPIGAVVVDAGGEVIGRGHNEREATGDPTAHAEVLAIRAAARHV 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPCTMCA AI L+R+ RL + A + K G + + +H P Sbjct: 61 GEWRLTGCTLVVTLEPCTMCAGAIVLSRLDRLVFAAYDEKAGAVGSLWDVVRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + ++DFF R Sbjct: 121 EVVGGVLADEAGARLRDFFIGHR 143 >gi|251788710|ref|YP_003003431.1| CMP/dCMP deaminase zinc-binding [Dickeya zeae Ech1591] gi|247537331|gb|ACT05952.1| CMP/dCMP deaminase zinc-binding [Dickeya zeae Ech1591] Length = 168 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 74/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL AQ A E+PVGAV V +I NR D TAHAEI+A++ G + L Sbjct: 10 WMRHALSLAQRAWDEGEVPVGAVLVQGGNVIGEGWNRPIGRHDPTAHAEIMALQQGGQTL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LY+TLEPC MCA A+ +RI RL YGA++ K G + +H Sbjct: 70 QNYRLLDTTLYITLEPCVMCAGAMIHSRISRLVYGAADAKTGAAGSLVDILRHPGINHHI 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I G+ +++ FF+ RR Sbjct: 130 MITDGVLADECAELLSRFFRMRR 152 >gi|291544028|emb|CBL17137.1| tRNA-adenosine deaminase [Ruminococcus sp. 18P13] Length = 151 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 55/145 (37%), Positives = 78/145 (53%), Gaps = 3/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A+E A+ AA EIPVGA+ V + +++ R NR D TAHAE+LAIR Sbjct: 6 YMRQAMELAEQAAALGEIPVGALVVQDATGEVLGRGYNRREVDHDPTAHAEVLAIRQAAL 65 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L LYVTLEPC MC I AR+RR+ +GA + K G ++ + L +H Sbjct: 66 AIGSWRLSGCTLYVTLEPCPMCCGTIINARVRRVVFGAYDSKAGSADSVINLFALPY-NH 124 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 P + G+ E ++ +Q FF R Sbjct: 125 KPAVTGGLLEDACKEQLQRFFSGLR 149 >gi|300691564|ref|YP_003752559.1| tRNA-specific adenosine deaminase [Ralstonia solanacearum PSI07] gi|299078624|emb|CBJ51281.1| tRNA-specific adenosine deaminase [Ralstonia solanacearum PSI07] Length = 169 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 53/148 (35%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL +A+ A E+PVGAV V N+I+ N D +AHAE+ A+R Sbjct: 5 ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LPE +++VTLEPC MCA A+ AR+ R+ YGA +PK G + + Sbjct: 65 AAVRLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I + Q +++ FF ERR Sbjct: 125 LNHQTAIIGSVLAQECGDMLRAFFAERR 152 >gi|226946009|ref|YP_002801082.1| Cytidine/deoxycytidylate deaminase-like protein [Azotobacter vinelandii DJ] gi|226720936|gb|ACO80107.1| Cytidine/deoxycytidylate deaminase-like protein [Azotobacter vinelandii DJ] Length = 158 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL A A E+PVGAV V +I+ R N +D +AHAE++AIR L Sbjct: 15 FMREALVLAAEGAGLGEVPVGAVLVRGGEIVGRGFNCPISRRDPSAHAEMVAIRAAAAAL 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP LYVTLEPC+MCA I AR+ R+ +GAS P+ G + F+ +H Sbjct: 75 DNYRLPGSTLYVTLEPCSMCAGLIVHARVARVVFGASEPRAGVAVSRGDFFAQDFLNHRV 134 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I G+ + I++ FF+ RR Sbjct: 135 LIEGGLLAEECGAILKAFFRARR 157 >gi|212634313|ref|YP_002310838.1| cytidine/deoxycytidylate deaminase [Shewanella piezotolerans WP3] gi|212555797|gb|ACJ28251.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Shewanella piezotolerans WP3] Length = 186 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 52/139 (37%), Positives = 75/139 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E A A + E+PVGAV V + +++S N + L D +AHAE+ IR ++L Sbjct: 23 FMKMAMEMAAKAEEKGEVPVGAVLVKDGEVVSAGFNYSIGLHDPSAHAEMQCIRQAGQLL 82 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI +RI RL YGA++ K G +H Sbjct: 83 ENYRLLDTTLYVTLEPCAMCAGAIVHSRISRLVYGANDEKTGAAGTVIDIVRHPAFNHQV 142 Query: 127 EIYPGISEQRSRQIIQDFF 145 E+ G+ ++ + + FF Sbjct: 143 EVTAGVRDEACSEQLSAFF 161 >gi|332654745|ref|ZP_08420487.1| cytidine/deoxycytidylate deaminase family protein [Ruminococcaceae bacterium D16] gi|332516088|gb|EGJ45696.1| cytidine/deoxycytidylate deaminase family protein [Ruminococcaceae bacterium D16] Length = 152 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 54/127 (42%), Positives = 69/127 (54%), Gaps = 1/127 (0%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 ++PVG V V + KI+ NR E D TAHAE+ AIR C L L LYVTLEP Sbjct: 22 DVPVGCVIVKDGKIVGEGRNRREEHGDATAHAELEAIRDACARLGSWRLHGCTLYVTLEP 81 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCA I +RI + YGA + K G + + HH P IY G E + ++I+Q Sbjct: 82 CPMCAGGIINSRIETVRYGARDEKAGCCSSVLNLFEERFNHH-PRIYRGPLEPQCQKILQ 140 Query: 143 DFFKERR 149 DFF + R Sbjct: 141 DFFLDLR 147 >gi|299067502|emb|CBJ38701.1| tRNA-specific adenosine deaminase [Ralstonia solanacearum CMR15] Length = 183 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 53/148 (35%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL +A+ A E+PVGAV V N+I+ N D +AHAE+ A+R Sbjct: 17 ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LPE +++VTLEPC MCA A+ AR+ R+ YGA +PK G + + Sbjct: 77 AAVRLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I + Q +++ FF ERR Sbjct: 137 LNHQTAIIGSVLAQDCGDMLRAFFAERR 164 >gi|225163582|ref|ZP_03725891.1| CMP/dCMP deaminase zinc-binding [Opitutaceae bacterium TAV2] gi|224801817|gb|EEG20104.1| CMP/dCMP deaminase zinc-binding [Opitutaceae bacterium TAV2] Length = 202 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 78/144 (54%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +MS A +A +A R+E+P+G V + ++I+ A N D TAHAE+LAI L Sbjct: 37 YMSLAYNQAIDAWRRDEVPIGCVIERSGEVIASAHNGVESANDPTAHAEMLAITQAASAL 96 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LYVT EPC MC+ A ++R++R+ Y +PK G + T L +H Sbjct: 97 GDWRLEECTLYVTKEPCPMCSGATLMSRLKRVCYAVPDPKMGCLGGATDLNALPRVNHHL 156 Query: 127 EIYP-GISEQRSRQIIQDFFKERR 149 I G+ E R ++Q FF+++R Sbjct: 157 GITAGGVLEDECRVLLQTFFRQKR 180 >gi|308389629|gb|ADO31949.1| cytidine and deoxycytidylate deaminase family protein [Neisseria meningitidis alpha710] Length = 239 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ + Sbjct: 95 FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSCHAEINALAQAGSEM 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237 >gi|168705456|ref|ZP_02737733.1| cytidine/deoxycytidylate deaminase family protein [Gemmata obscuriglobus UQM 2246] Length = 167 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 75/143 (52%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA AA +E+PVGA+ V +I +A N L D TAHAE++AI L Sbjct: 20 MEMALDEAAVAASEDEVPVGALIVHPELGVIGQAHNMRERLNDPTAHAEMIAITQAATAL 79 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I AR+ + YG ++PK G Q + +H Sbjct: 80 KSWRLEKCILYVTLEPCPMCAGGIVQARVPMVVYGCTDPKAGACHTLFQIASDPRLNHRA 139 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ R + DFF+ +R Sbjct: 140 QVVGGVLADRCAAALTDFFRRKR 162 >gi|322690120|ref|YP_004209854.1| cytidine/deoxycytidine deaminase [Bifidobacterium longum subsp. infantis 157F] gi|320461456|dbj|BAJ72076.1| putative cytidine/deoxycytidine deaminase [Bifidobacterium longum subsp. infantis 157F] Length = 149 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 76/144 (52%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M CALE A AA ++PVGAV VL+ +I+ R N D AHAEI+A+R + Sbjct: 7 MRCALELAGQAAAAGDVPVGAV-VLDAAGQIVGRGYNTREADGDPLAHAEIIAMRQAAQA 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + L VTLEPC MCA A I + +GA +PK G + HS Sbjct: 66 LGAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRDPHIGHS 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE++ G+ E + I+ DFF +RR Sbjct: 126 PEVHGGVLEVECQSILTDFFAQRR 149 >gi|325144274|gb|EGC66579.1| tRNA-specific adenosine deaminase [Neisseria meningitidis M01-240013] Length = 239 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ + Sbjct: 95 FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSCHAEINALAQAGSEM 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 215 AIRGGILQEECRAVLNRFFQNKR 237 >gi|311234063|gb|ADP86917.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio vulgaris RCH1] Length = 214 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL EA+ A E+PVGAV V +II R NR D +AHAE++A+RM Sbjct: 69 LMDEALAEARLAQAEGEVPVGAVVVDKAGRIIGRGHNRCLRDNDPSAHAEMVALRMAATT 128 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L L VTLEPC MCA AI AR+ + YGA +PK G + + + + +H Sbjct: 129 TANYRLGGTFLVVTLEPCLMCAGAIVHARVEGVVYGAEDPKAGAVTSCLEAFEQPFLNHR 188 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P G+ + I++DFF RR Sbjct: 189 PWHMGGLRRRACTAILKDFFNGRR 212 >gi|17546170|ref|NP_519572.1| hydrolase [Ralstonia solanacearum GMI1000] gi|17428466|emb|CAD15153.1| putative cytosine/adenosine deaminase protein [Ralstonia solanacearum GMI1000] Length = 183 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 53/148 (35%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL +A+ A E+PVGAV V N+I+ N D +AHAE+ A+R Sbjct: 17 ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LPE +++VTLEPC MCA A+ AR+ R+ YGA +PK G + + Sbjct: 77 AAVRLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I + Q +++ FF ERR Sbjct: 137 LNHQTAIIGSVLAQDCGDMLRAFFAERR 164 >gi|289422456|ref|ZP_06424299.1| tRNA-specific adenosine deaminase [Peptostreptococcus anaerobius 653-L] gi|289157028|gb|EFD05650.1| tRNA-specific adenosine deaminase [Peptostreptococcus anaerobius 653-L] Length = 154 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+ A E P+GAV V +I+ R N+ + AHAEI+AI + L Sbjct: 6 FMEQALVEARKAYALKETPIGAVIVYQGRIVGRGFNQVELQNNPLAHAEIMAINDAVKNL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 ++ L + +YVT+EPC MCA AI+ +RIR LY GA + K + F Sbjct: 66 ARWRLYDCQMYVTMEPCFMCAGAIANSRIRGLYIGAGHHKNHIVTKHNDFKKEFYTDSKI 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 GI E+ +I+ DFFKERR Sbjct: 126 NFEIGILEEDCSRILVDFFKERR 148 >gi|50553008|ref|XP_503914.1| YALI0E13728p [Yarrowia lipolytica] gi|49649783|emb|CAG79507.1| YALI0E13728p [Yarrowia lipolytica] Length = 222 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 50/139 (35%), Positives = 79/139 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+A+ + NE+PVG V V N K+I+R N + T HAE L I + Sbjct: 11 FMEEALEQAELSLNNNEVPVGCVFVHNGKVIARGMNDTNKSLCGTRHAEFLGIEHILKTH 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + +I EVDLYVT+EPC MCA+A+ +I+ +YYG +N + GG + ++ + Sbjct: 71 TADIFEEVDLYVTVEPCIMCASALRQLKIKCVYYGCANDRFGGCGSVMSIHSDKGVDPTY 130 Query: 127 EIYPGISEQRSRQIIQDFF 145 + YPG + + +++ F+ Sbjct: 131 KAYPGFYREEAIMLLRRFY 149 >gi|326328640|ref|ZP_08194980.1| cytidine and deoxycytidylate deaminase family protein [Nocardioidaceae bacterium Broad-1] gi|325953601|gb|EGD45601.1| cytidine and deoxycytidylate deaminase family protein [Nocardioidaceae bacterium Broad-1] Length = 165 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 76/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALEE + A ++P+GAV V + +I R N D T HAE++A+R + Sbjct: 11 MRAALEEGRAALATGDVPIGAVVVDPSGAVIGRGRNVREAEADPTGHAEVVALREAAKAR 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPCTMCA A LAR+ R+ +GA + K G + + +H P Sbjct: 71 GEWRLEGCTLVVTLEPCTMCAGAAVLARVERIVFGAFDDKAGAVGSLWDVVRDRRLNHRP 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + R +++DFF +R Sbjct: 131 EVVAGLLAEEQRALLEDFFGAQR 153 >gi|288554625|ref|YP_003426560.1| CMP/dCMP deaminase zinc-binding protein [Bacillus pseudofirmus OF4] gi|288545785|gb|ADC49668.1| CMP/dCMP deaminase zinc-binding protein [Bacillus pseudofirmus OF4] Length = 162 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 74/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA A E+P+GAV V + ++I+ A NR AHAE+LAI+ C +L Sbjct: 8 WMKLALREADAAEQIGEVPIGAVIVKDGEVIAAAHNRRECDHQAIAHAELLAIKEACDVL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA AI +RI + YGA++PK G +H Sbjct: 68 GSWRLSGCTLYVTLEPCPMCAGAIVQSRIDLVVYGAADPKAGCAGTLMNLLDDPRFNHRA 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G E + + FF++ R Sbjct: 128 EVISGCLETECGERLTAFFRKLR 150 >gi|254672230|emb|CBA05187.1| putative hydrolase protein [Neisseria meningitidis alpha275] Length = 197 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ + Sbjct: 53 FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 112 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 113 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 172 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 173 AIRGGILQEECRAVLSRFFQNKR 195 >gi|329897048|ref|ZP_08271820.1| tRNA-specific adenosine-34 deaminase [gamma proteobacterium IMCC3088] gi|328921488|gb|EGG28874.1| tRNA-specific adenosine-34 deaminase [gamma proteobacterium IMCC3088] Length = 159 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M AL +A+ A E+PVG V V + +I+ N D +AHAEI+A+R Sbjct: 1 MNEDEYWMRQALLQAEQAYACGEVPVGCVIVRDGSLIASGHNVVISSADPSAHAEIVALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + LYVTLEPC MC A+ AR++RL + A+ PK G + + + Sbjct: 61 HAGSRIGNYRLVDASLYVTLEPCLMCVGAMVHARVQRLIFAATEPKAGAVCSRCEALNFD 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ Q+S +++ FFKERR Sbjct: 121 HLNHRVQWQGGVMGQQSSELLSRFFKERR 149 >gi|167752821|ref|ZP_02424948.1| hypothetical protein ALIPUT_01082 [Alistipes putredinis DSM 17216] gi|167659890|gb|EDS04020.1| hypothetical protein ALIPUT_01082 [Alistipes putredinis DSM 17216] Length = 148 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 76/143 (53%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+ A E+P+GAV V + +I+ R N L D TAHAE+ A+ + Sbjct: 10 FMRLALNEAEKALEEQEVPIGAVVVADGRIVGRGHNLVETLADATAHAEMQALTAAASTV 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L E LYVT+EPC MCA AI+ +++ R+ YGA +PK G Q + T Sbjct: 70 GGKYLSECTLYVTVEPCIMCAGAIAWSQVGRVVYGADDPKRGYRRYSEQVFPPRTT---- 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + ++++ FF R Sbjct: 126 -VTRGVLAEECERLVRSFFAALR 147 >gi|59801336|ref|YP_208048.1| putative cytosine deaminase [Neisseria gonorrhoeae FA 1090] gi|194098422|ref|YP_002001481.1| putative cytosine deaminase [Neisseria gonorrhoeae NCCP11945] gi|240080887|ref|ZP_04725430.1| putative cytosine deaminase [Neisseria gonorrhoeae FA19] gi|240117796|ref|ZP_04731858.1| putative cytosine deaminase [Neisseria gonorrhoeae PID1] gi|240125599|ref|ZP_04738485.1| putative cytosine deaminase [Neisseria gonorrhoeae SK-92-679] gi|268597004|ref|ZP_06131171.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae FA19] gi|268603495|ref|ZP_06137662.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae PID1] gi|268684187|ref|ZP_06151049.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae SK-92-679] gi|59718231|gb|AAW89636.1| putative cytosine deaminase [Neisseria gonorrhoeae FA 1090] gi|193933712|gb|ACF29536.1| putative cytosine deaminase [Neisseria gonorrhoeae NCCP11945] gi|268550792|gb|EEZ45811.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae FA19] gi|268587626|gb|EEZ52302.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae PID1] gi|268624471|gb|EEZ56871.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae SK-92-679] Length = 239 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ + Sbjct: 95 FMREALRQAEQSAADGEIPVGAVIVSDGKIITSAHNTCIADCNVSRHAEINALAQAGSEM 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237 >gi|322412766|gb|EFY03674.1| putative cytidine/deoxycytidylate deaminase family protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 175 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 11 FMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEANAHE 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + ++VT+EPC MC+ AI LARI + YGA+N K GG ++ Q T +H Sbjct: 71 GNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGANNQKFGGTDSLYQILTDERLNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + I+Q FF++ R Sbjct: 131 QVERGLLAEDCANIMQTFFRQGR 153 >gi|124025482|ref|YP_001014598.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. NATL1A] gi|123960550|gb|ABM75333.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. NATL1A] Length = 155 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ L +A+ R E+P+ AV +L+ K I GNR +KD HAE++A+R I Sbjct: 1 MTRLLTKARLVGERGEVPIAAV-ILDKKGRCIGYGGNRRESMKDPLGHAELVALRQASWI 59 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + + L V LEPC MCA A+ AR+ ++ YG+ +PK G + + HH Sbjct: 60 KNDWRFNDCTLIVNLEPCPMCAGALIQARMGKIIYGSEDPKRGALGGTINLAEHKSAHHR 119 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 I GI E+ S++II D+FK++R Sbjct: 120 LLIEKGIMEEESKKIIVDWFKDKR 143 >gi|15893419|ref|NP_346768.1| cytosine deaminase [Clostridium acetobutylicum ATCC 824] gi|15022950|gb|AAK78108.1|AE007525_2 Cytosine deaminase [Clostridium acetobutylicum ATCC 824] gi|325507531|gb|ADZ19167.1| Cytosine deaminase [Clostridium acetobutylicum EA 2018] Length = 147 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 82/145 (56%), Gaps = 1/145 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N F++ A++EA+ A E+PVGAV V +NKII+ + N LK+ +AHAEI+AI + Sbjct: 3 NEFLNEAIKEAKLAKKEGEVPVGAVIVKDNKIIATSHNLKESLKNPSAHAEIIAIERAAK 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L+ L ++YVTLEPC MCAA I +RI ++Y G +P G + + Sbjct: 63 YLNNWRLNGCEMYVTLEPCPMCAACICQSRISKVYVGTFDPISGACGSVVNITENDYLRY 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ S + S I++ FFK RR Sbjct: 123 HTEVEWLYSNECS-DILKGFFKARR 146 >gi|167749860|ref|ZP_02421987.1| hypothetical protein EUBSIR_00828 [Eubacterium siraeum DSM 15702] gi|167657172|gb|EDS01302.1| hypothetical protein EUBSIR_00828 [Eubacterium siraeum DSM 15702] Length = 150 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 55/150 (36%), Positives = 83/150 (55%), Gaps = 2/150 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV-TAHAEILAI 59 M +M+ +E A+ AA + E PVGA+ V + I G RE + + TAHAEI+AI Sbjct: 1 MTADEEYMTLCIELAKKAAEKGECPVGAIVVDKDGRIIGEGYNMREAEQMPTAHAEIIAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + ++ L E LYVTLEPC MCA AI +RI+RL YGA + KGG + + + Sbjct: 61 EQAAKAMNSWRLTECTLYVTLEPCPMCAGAIINSRIKRLVYGAFDEKGGACASLMEIFDY 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P + + + +++ +FFK+ R Sbjct: 121 PF-NHRPMVRSRVLQDECAKLLTEFFKDLR 149 >gi|312879894|ref|ZP_07739694.1| tRNA-adenosine deaminase [Aminomonas paucivorans DSM 12260] gi|310783185|gb|EFQ23583.1| tRNA-adenosine deaminase [Aminomonas paucivorans DSM 12260] Length = 152 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 56/142 (39%), Positives = 75/142 (52%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EA+ A EIPVGAVAV + +I+ R NR + + AHAE+ A+R C L Sbjct: 1 MGEALAEARLALEEGEIPVGAVAVDHGRIVGRGRNRRKLQEAPFAHAEMEALRDACASLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L V LYVTLEPC MCA AI R+ RL +GA +P+ G + H Sbjct: 61 TWRLDGVTLYVTLEPCPMCAGAILQTRVGRLVFGARDPRAGACGSLVDLLRDPRQTHRCR 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ + + ++ DFF RR Sbjct: 121 VREGVGREEAACLLGDFFLLRR 142 >gi|218768019|ref|YP_002342531.1| putative cytosine deaminase [Neisseria meningitidis Z2491] gi|121052027|emb|CAM08336.1| putative cytosine deaminase [Neisseria meningitidis Z2491] Length = 239 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ R + Sbjct: 95 FMCEALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGREM 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ AR++R+ YGA PK G + + + Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARVKRVIYGAGEPKTGAAGSIVNLFADKRLNTHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237 >gi|292493710|ref|YP_003529149.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus halophilus Nc4] gi|291582305|gb|ADE16762.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus halophilus Nc4] Length = 142 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 58/142 (40%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A++A R E+PVGAV V ++++ N KD TAHAEI AIR + L Sbjct: 1 MHHALVLARHAEERGEVPVGAVLVQEGEMVAEGWNCPITAKDPTAHAEIQAIRAASQQLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L LYVTLEPC MCA AI ARI+R+ +GA +PKGG + +H + Sbjct: 61 NYRLVGTTLYVTLEPCAMCAGAIIQARIQRVVFGAFDPKGGAAGSVLSILPGDRLNHQVQ 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 GI + I+ FF+ RR Sbjct: 121 CQGGILAEPCGAILSAFFRARR 142 >gi|330991261|ref|ZP_08315212.1| tRNA-specific adenosine deaminase [Gluconacetobacter sp. SXCC-1] gi|329761280|gb|EGG77773.1| tRNA-specific adenosine deaminase [Gluconacetobacter sp. SXCC-1] Length = 107 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 44/101 (43%), Positives = 64/101 (63%) Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 D +AHAE+ +R R+ L + LYVTLEPC MCAAA R+ R+ +GA +PKGG Sbjct: 6 DPSAHAEMQVMRAATRLRGGARLVDCTLYVTLEPCPMCAAAAIHFRMGRIVFGAYDPKGG 65 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G+E+G + +T C H PE G+ E+ + ++QDFF++ R Sbjct: 66 GVEHGPRLFTHPRCLHRPETVGGVREREAGTLLQDFFRQLR 106 >gi|194366203|ref|YP_002028813.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia R551-3] gi|194349007|gb|ACF52130.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia R551-3] Length = 174 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 59/147 (40%), Positives = 85/147 (57%), Gaps = 6/147 (4%) Query: 7 FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL A+ A +EIPVGAV V + +++ N N D +AHAEI+A+R G + Sbjct: 16 WMRHALALAERAQREFDEIPVGAVLVSADGQLLGEGWNLNIASHDPSAHAEIVAMRSGGK 75 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 +L+ L LYVTLEPC MCA AI AR+ RL YGAS+PK G G+ F L H Sbjct: 76 LLANHRLLGSTLYVTLEPCAMCAMAIVHARVARLVYGASDPKTGAC--GSVFDLLGDGRH 133 Query: 125 SP--EIYPGISEQRSRQIIQDFFKERR 149 + EI+ G+ + + + ++F+ +R Sbjct: 134 NHRVEIHGGVLAKEASMRLTNYFRTKR 160 >gi|254804815|ref|YP_003083036.1| probable cytidine deaminase [Neisseria meningitidis alpha14] gi|304387765|ref|ZP_07369945.1| tRNA-specific adenosine deaminase [Neisseria meningitidis ATCC 13091] gi|254668357|emb|CBA05413.1| probable cytidine deaminase [Neisseria meningitidis alpha14] gi|254671348|emb|CBA08775.1| putative hydrolase protein [Neisseria meningitidis alpha153] gi|304338241|gb|EFM04371.1| tRNA-specific adenosine deaminase [Neisseria meningitidis ATCC 13091] gi|319410268|emb|CBY90609.1| K01485 cytosine deaminase [Neisseria meningitidis WUE 2594] Length = 239 Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ + Sbjct: 95 FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237 >gi|312959178|ref|ZP_07773697.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas fluorescens WH6] gi|311286948|gb|EFQ65510.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas fluorescens WH6] Length = 165 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL A A+ E+PVGAV V + +II R N D +AHAE++AIR R + Sbjct: 18 FMREALALAAQGAVLGEVPVGAVLVQDGEIIGRGFNCPISGNDPSAHAEMVAIRAAARAI 77 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S L LYVTLEPC+MCA I +RI R+ YGA PK G +++ QF+T +H Sbjct: 78 SNYRLVGSTLYVTLEPCSMCAGLIVHSRIARVVYGALEPKAGIVQSQGQFFTQGFLNHRV 137 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ + ++ +FFK RR Sbjct: 138 LFEGGVLAEECGTVLSEFFKARR 160 >gi|293399195|ref|ZP_06643360.1| cytosine deaminase [Neisseria gonorrhoeae F62] gi|291610609|gb|EFF39719.1| cytosine deaminase [Neisseria gonorrhoeae F62] Length = 239 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ + Sbjct: 95 FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGATEPKTGAAGSIVNLFADKRLNTHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237 >gi|34498926|ref|NP_903141.1| cytidine deaminase [Chromobacterium violaceum ATCC 12472] gi|34104775|gb|AAQ61132.1| probable cytidine deaminase [Chromobacterium violaceum ATCC 12472] Length = 244 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A + AQ AA E+PVGA+ V + +II R N+ D +AHAE+ A+R L Sbjct: 96 YMRQARDLAQQAAAEGEVPVGALVVKDGEIIGRGYNQPIGRHDPSAHAEMQALRDAAARL 155 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L DLYVTLEPC MC+ AI AR+ R+ YGA++ K G + + +H Sbjct: 156 RNYRLDGCDLYVTLEPCPMCSGAILHARVARVIYGAADAKTGAAGSTVDLFADPRLNHHA 215 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + + FF++RR Sbjct: 216 AVFGGVEAEACAAQLSAFFRQRR 238 >gi|294787884|ref|ZP_06753128.1| tRNA-specific adenosine deaminase [Simonsiella muelleri ATCC 29453] gi|294484177|gb|EFG31860.1| tRNA-specific adenosine deaminase [Simonsiella muelleri ATCC 29453] Length = 240 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 53/127 (41%), Positives = 68/127 (53%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 EIPVGA+ + KII++A N V HAEI I +IL L E DLYVTLEP Sbjct: 113 EIPVGAILLHQGKIIAQAHNLCVAGHSVCQHAEIQVIEQAGKILQNYRLDECDLYVTLEP 172 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCA AI ARIRRL + A PK G + + + + GI S+ I+Q Sbjct: 173 CAMCAGAIVQARIRRLIFAAPEPKMGAAGSVLNIFANKRLNSHTAVKSGILADESKAILQ 232 Query: 143 DFFKERR 149 FF+++R Sbjct: 233 QFFQQKR 239 >gi|39995176|ref|NP_951127.1| cytidine/deoxycytidylate deaminase family protein [Geobacter sulfurreducens PCA] gi|39981938|gb|AAR33400.1| cytidine/deoxycytidylate deaminase family protein [Geobacter sulfurreducens PCA] gi|307634647|gb|ADI82903.2| tRNA (adenosine-34) deaminase [Geobacter sulfurreducens KN400] Length = 179 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 70/128 (54%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 +E+P+GAV V + +I R N D +AHAE++AIR R + L LYVTLE Sbjct: 30 DEVPIGAVIVRDGAVIGRGHNLREGSNDPSAHAEMIAIRQAARRSANWRLTGATLYVTLE 89 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC AI LAR+ R+ +G +PKGG + +H + PG+ ++ ++ Sbjct: 90 PCLMCMGAIILARLERVVFGCYDPKGGAAGSLYDLSADPRLNHQVRLSPGVCQEECGTML 149 Query: 142 QDFFKERR 149 DFF++ R Sbjct: 150 SDFFRDLR 157 >gi|239998824|ref|ZP_04718748.1| putative cytosine deaminase [Neisseria gonorrhoeae 35/02] gi|240014261|ref|ZP_04721174.1| putative cytosine deaminase [Neisseria gonorrhoeae DGI18] gi|240016697|ref|ZP_04723237.1| putative cytosine deaminase [Neisseria gonorrhoeae FA6140] gi|240121824|ref|ZP_04734786.1| putative cytosine deaminase [Neisseria gonorrhoeae PID24-1] gi|260440688|ref|ZP_05794504.1| putative cytosine deaminase [Neisseria gonorrhoeae DGI2] gi|268594667|ref|ZP_06128834.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae 35/02] gi|291043998|ref|ZP_06569714.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae DGI2] gi|268548056|gb|EEZ43474.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae 35/02] gi|291012461|gb|EFE04450.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae DGI2] gi|317164113|gb|ADV07654.1| putative cytosine deaminase [Neisseria gonorrhoeae TCDC-NG08107] Length = 239 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ + Sbjct: 95 FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237 >gi|114330609|ref|YP_746831.1| CMP/dCMP deaminase, zinc-binding [Nitrosomonas eutropha C91] gi|114307623|gb|ABI58866.1| tRNA-adenosine deaminase [Nitrosomonas eutropha C91] Length = 167 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 75/143 (52%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+ A+ A E+PVGAV V N++I N L D TAHAEI+A+R L Sbjct: 17 FMRQALDLARVAGDSGEVPVGAVVVRNSQIAGYGYNCPVTLMDPTAHAEIMALRDAANKL 76 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LPE LYVTLEPC MC ++ ARI+RL Y A +PK G + +H Sbjct: 77 GNYRLPECTLYVTLEPCVMCIGSMFHARIKRLVYAAEDPKTGVCGSLLDLPADTRLNHHL 136 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + +++ FF RR Sbjct: 137 VVSQGVLADEASTLLKQFFIIRR 159 >gi|149923193|ref|ZP_01911606.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein [Plesiocystis pacifica SIR-1] gi|149815967|gb|EDM75483.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein [Plesiocystis pacifica SIR-1] Length = 165 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 50/138 (36%), Positives = 72/138 (52%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ AA R ++PVGA+ V + KI+ N + D T HAE++A+R CR Sbjct: 1 MRMAMALGAEAATRGDVPVGALVVRDGKILGVGFNTREQDHDPTGHAEVVAMREACRQAR 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L LYVTLEPC MCA + RI RL YGA + K G + + Q +H E Sbjct: 61 RWRLDGATLYVTLEPCPMCAGTLVNTRIARLVYGAHDAKAGAVRSLYQLCEDPRLNHRLE 120 Query: 128 IYPGISEQRSRQIIQDFF 145 + G+ + +++DFF Sbjct: 121 VVGGVLAEECAALLKDFF 138 >gi|126668408|ref|ZP_01739365.1| hypothetical protein MELB17_14743 [Marinobacter sp. ELB17] gi|126627117|gb|EAZ97757.1| hypothetical protein MELB17_14743 [Marinobacter sp. ELB17] Length = 167 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 51/127 (40%), Positives = 70/127 (55%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V++ + + N+ D TAHAEI A+R L+ L LYVTLEP Sbjct: 31 EVPVGAVVVIDGQEVGAGFNKPISSCDPTAHAEICALRQAATYLNNYRLSGATLYVTLEP 90 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 CTMC AI +RI R+ YGA+ PK G +E+ + + + E G+ + +II Sbjct: 91 CTMCVGAIVHSRISRVVYGATEPKAGAVESARRTFDEPHLNWRVETRGGLLAEPCSRIIS 150 Query: 143 DFFKERR 149 DFF RR Sbjct: 151 DFFSRRR 157 >gi|254429334|ref|ZP_05043041.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Alcanivorax sp. DG881] gi|196195503|gb|EDX90462.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Alcanivorax sp. DG881] Length = 150 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 50/127 (39%), Positives = 75/127 (59%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGA+ V +N+++ + N+ D +AHAEI+A+R + L LYVTLEP Sbjct: 22 EVPVGALVVRDNRLLGKGYNQPIIASDPSAHAEIVAMRSAAQAERNYRLSGSTLYVTLEP 81 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 CTMC A+ ARI RL YGAS P+ G E+ Q ++ +H ++ G+ + S +++ Sbjct: 82 CTMCFGAMVHARIGRLVYGASEPRAGVCESQLQLPSVDFYNHRMDVEGGVLAEESALLLK 141 Query: 143 DFFKERR 149 FF ERR Sbjct: 142 GFFAERR 148 >gi|302342017|ref|YP_003806546.1| CMP/dCMP deaminase zinc-binding protein [Desulfarculus baarsii DSM 2075] gi|301638630|gb|ADK83952.1| CMP/dCMP deaminase zinc-binding protein [Desulfarculus baarsii DSM 2075] Length = 171 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E P+GAV V ++++ GNR D TAHAE+L +R + L LYV+L Sbjct: 31 GETPIGAVLVDAAGRVLAAHGNRAISHTDPTAHAEMLVLRQAAAAMGNYRLVGSTLYVSL 90 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA AI AR+RR+ YGA++PK G + + +H P + G+ + S + Sbjct: 91 EPCPMCAGAIVWARVRRVVYGAADPKAGALGSALDLSRQPGLNHRPIVEGGLLAEESAAL 150 Query: 141 IQDFFKERR 149 +++FF+ RR Sbjct: 151 LREFFQSRR 159 >gi|184199963|ref|YP_001854170.1| putative deaminase [Kocuria rhizophila DC2201] gi|183580193|dbj|BAG28664.1| putative tRNA-specific adenosine deaminase [Kocuria rhizophila DC2201] Length = 158 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 75/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL EA A ++P+GAV + + ++I NR E D TAHAE+LA+R Sbjct: 15 WMDLALSEAALTAASGDVPIGAVVLDTDGRVIGTGRNRREECGDPTAHAEVLALREAAAH 74 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L L VTLEPC MCA A+ LAR+ + +GA +PK G + +H Sbjct: 75 RGEWRLEGCTLVVTLEPCAMCAGAVVLARVPTVVFGAWDPKAGACGSVFDIVRDPRLNHW 134 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E +++DFF+ R Sbjct: 135 VEVTGGVREDECAALLRDFFRTHR 158 >gi|297193429|ref|ZP_06910827.1| deaminase [Streptomyces pristinaespiralis ATCC 25486] gi|297151779|gb|EDY67096.2| deaminase [Streptomyces pristinaespiralis ATCC 25486] Length = 176 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 76/144 (52%), Gaps = 1/144 (0%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCR 64 V M AL EA AA ++PVGAV + I G+ RE D TAHAE+LAIR Sbjct: 29 VSMRLALGEADRAAQGGDVPVGAVVLSGEGTILAVGHNEREATGDPTAHAEVLAIRRAAA 88 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 +L + L L VTLEPCTMCA A+ +R+ R+ YGA + K G + +H Sbjct: 89 VLGEWRLTGCTLVVTLEPCTMCAGALVQSRVARVVYGARDDKAGAAGSLWDVVRDRRLNH 148 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 PE+ G+ + + + FF++R Sbjct: 149 RPEVVSGVLGEECSKQLTAFFRDR 172 >gi|29830723|ref|NP_825357.1| cytidine/deoxycytidine deaminase [Streptomyces avermitilis MA-4680] gi|29607836|dbj|BAC71892.1| putative cytidine/deoxycytidine deaminase [Streptomyces avermitilis MA-4680] Length = 142 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 53/142 (37%), Positives = 75/142 (52%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA AA ++PVGAV + + +I+R N D TAHAE+LA+R L Sbjct: 1 MRLALTEAVRAAESADVPVGAVVLAPDGSVIARGHNEREATGDPTAHAEVLAVRRAAERL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPCTMCA A+ +R+ R+ YGA + K G + +H P Sbjct: 61 GRWRLSGCTLVVTLEPCTMCAGALVQSRVDRVVYGARDEKAGAAGSLWDVVRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 E+ G+ ++ +FF+ER Sbjct: 121 EVIEGVLADECAGLLTEFFRER 142 >gi|167623310|ref|YP_001673604.1| zinc-binding CMP/dCMP deaminase [Shewanella halifaxensis HAW-EB4] gi|167353332|gb|ABZ75945.1| CMP/dCMP deaminase zinc-binding [Shewanella halifaxensis HAW-EB4] Length = 163 Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 52/142 (36%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A++ A A + E+PVGAV V + +++S N + L D +AHAE+ +R +I+ Sbjct: 1 MKMAMDMAIKAEEKGEVPVGAVLVKDGEVLSAGFNFSIGLHDPSAHAEMQCLRQAGQIMQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA AI +RI RL +GA + K G + +H E Sbjct: 61 NYRLLDTTLYVTLEPCAMCAGAIVHSRIGRLVFGAKDEKTGAAGTVIDIVRHSAFNHQVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ E + + FFK RR Sbjct: 121 VSSGVLESECSEQLSAFFKRRR 142 >gi|153813521|ref|ZP_01966189.1| hypothetical protein RUMOBE_03942 [Ruminococcus obeum ATCC 29174] gi|149830392|gb|EDM85484.1| hypothetical protein RUMOBE_03942 [Ruminococcus obeum ATCC 29174] Length = 164 Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 51/142 (35%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ +A+ A E+P+G V V + KII+R NR K+ +HAE+ AIR + L Sbjct: 1 MKEAIRQAKKARALEEVPIGCVIVSDGKIIARGYNRRNTDKNTLSHAELNAIRKASKKLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L +YVTLEPC MCA A+ +RI + G+ NPK G + + +H + Sbjct: 61 DWRLEGCTMYVTLEPCQMCAGALVQSRIDEVVIGSMNPKAGCAGSVLNLLQVDNFNHQVK 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I G+ E+ ++ DFF+E R Sbjct: 121 ITRGVLEEECSMMLSDFFRELR 142 >gi|240112750|ref|ZP_04727240.1| putative cytosine deaminase [Neisseria gonorrhoeae MS11] gi|240115501|ref|ZP_04729563.1| putative cytosine deaminase [Neisseria gonorrhoeae PID18] gi|240123350|ref|ZP_04736306.1| putative cytosine deaminase [Neisseria gonorrhoeae PID332] gi|240128054|ref|ZP_04740715.1| putative cytosine deaminase [Neisseria gonorrhoeae SK-93-1035] gi|254493609|ref|ZP_05106780.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae 1291] gi|268598817|ref|ZP_06132984.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae MS11] gi|268601174|ref|ZP_06135341.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae PID18] gi|268681975|ref|ZP_06148837.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae PID332] gi|268686443|ref|ZP_06153305.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae SK-93-1035] gi|226512649|gb|EEH61994.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae 1291] gi|268582948|gb|EEZ47624.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae MS11] gi|268585305|gb|EEZ49981.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae PID18] gi|268622259|gb|EEZ54659.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae PID332] gi|268626727|gb|EEZ59127.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae SK-93-1035] Length = 239 Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ + Sbjct: 95 FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237 >gi|256852104|ref|ZP_05557491.1| tRNA-adenosine deaminase [Lactobacillus jensenii 27-2-CHN] gi|260661326|ref|ZP_05862239.1| tRNA-adenosine deaminase [Lactobacillus jensenii 115-3-CHN] gi|282934787|ref|ZP_06340025.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1] gi|256615516|gb|EEU20706.1| tRNA-adenosine deaminase [Lactobacillus jensenii 27-2-CHN] gi|260547781|gb|EEX23758.1| tRNA-adenosine deaminase [Lactobacillus jensenii 115-3-CHN] gi|281301150|gb|EFA93456.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1] Length = 174 Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 78/131 (59%), Gaps = 3/131 (2%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYV 78 ++E+P+GA+ V ++I R NR REL +V T HAEILAI C+ L+ L L+V Sbjct: 24 QDEVPIGAIVVDPKGQVIGRGYNR-RELDNVATHHAEILAINEACKTLNSWRLINCSLFV 82 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 TLEPC MCA AI AR++ ++YGA + K G + + + +H P++ G+ ++ Sbjct: 83 TLEPCAMCAGAIINARLKEVFYGAPDHKAGASGSVVDLFAVEKFNHHPQVIRGLYRDKAS 142 Query: 139 QIIQDFFKERR 149 ++ +FF+ R Sbjct: 143 SMLTNFFRTIR 153 >gi|261380282|ref|ZP_05984855.1| tRNA-specific adenosine deaminase [Neisseria subflava NJ9703] gi|284796794|gb|EFC52141.1| tRNA-specific adenosine deaminase [Neisseria subflava NJ9703] Length = 240 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E+A+ +A+ E+PVGAV V + I+ N +V+ HAEI A+ + L Sbjct: 95 FMRLAIEQAKQSAVLGEVPVGAVIVYQGEAIAATHNTCIGDHNVSHHAEINALAAAGKTL 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + D+Y+TLEPC+MCA+A+ AR+ R+ YGA+ K G + + + Sbjct: 155 QNYRLEDCDVYITLEPCSMCASALIQARVGRVIYGAAEAKTGAAGSVVDLFADKRLNKHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI + + ++QDFF +R Sbjct: 215 AILGGILAEECQSVLQDFFAAKR 237 >gi|303232398|ref|ZP_07319090.1| cytidine and deoxycytidylate deaminase zinc-binding region [Atopobium vaginae PB189-T1-4] gi|302481482|gb|EFL44550.1| cytidine and deoxycytidylate deaminase zinc-binding region [Atopobium vaginae PB189-T1-4] Length = 164 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+ AA NE+P+GAV V N II+RA N E + HAE LA++ L Sbjct: 21 FMRAALAEARAAAAENEVPIGAVVVYNGAIIARAHNTREESTNPAGHAEFLAMQHAAETL 80 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +YVTLEPC MCA + ARI R Y AS+PK G + +H Sbjct: 81 QRWRLFGCTVYVTLEPCLMCAGLMLNARIDRCVYAASDPKAGAVGTLYNVSNDFRLNHKF 140 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + + +++QDFF+ RR Sbjct: 141 MVTTGVLQGEAVELLQDFFRHRR 163 >gi|260906121|ref|ZP_05914443.1| cytidine/deoxycytidine deaminase [Brevibacterium linens BL2] Length = 148 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 71/129 (55%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 +++PVGAV + N +I R NR +D HAE++A+R + + L + L VTL Sbjct: 15 DDVPVGAVVIDGNGAVIGRGHNRREVDQDPLGHAELMAMRNAAEVTGRWRLDDATLVVTL 74 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A+ +RI R+ YGA + K G + H PE+Y G++ R R++ Sbjct: 75 EPCAMCAGAVVGSRIARVVYGAFDEKAGAAGSVWDLLRDRAALHHPEVYSGVAASRCREL 134 Query: 141 IQDFFKERR 149 + +FF +R Sbjct: 135 LSEFFAAKR 143 >gi|154496071|ref|ZP_02034767.1| hypothetical protein BACCAP_00355 [Bacteroides capillosus ATCC 29799] gi|150274626|gb|EDN01690.1| hypothetical protein BACCAP_00355 [Bacteroides capillosus ATCC 29799] Length = 256 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+ A+ A E+PVG V V +++ R NR E KD AHAE++AI + L Sbjct: 6 YMRQALDLAREAMEAGEVPVGCVVVWEGRVVGRGRNRREENKDALAHAELMAIHEANQTL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + DLYVTLEPC MCA I ARI R++YGA + + G + ++ A +H P Sbjct: 66 GGWRLHKADLYVTLEPCAMCAGGIVNARIPRVWYGAEDTRFGACGSALDVFS-APLNHRP 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI + S ++Q FF+ R Sbjct: 125 QVTGGILAEESLALMQQFFQRLR 147 >gi|77166061|ref|YP_344586.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Nitrosococcus oceani ATCC 19707] gi|254436457|ref|ZP_05049961.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Nitrosococcus oceani AFC27] gi|76884375|gb|ABA59056.1| tRNA-adenosine deaminase [Nitrosococcus oceani ATCC 19707] gi|207087927|gb|EDZ65202.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Nitrosococcus oceani AFC27] Length = 155 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 74/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V +++ + N D TAHAEI AIR + L Sbjct: 13 WMHHALALARYAEEAGEVPVGAVVVQEGEMVGKGWNCPINSHDPTAHAEIQAIRAASQKL 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA AI ARI+R+ +GA +PKGG + +H Sbjct: 73 GNYRLVGTTLYVTLEPCAMCAGAIIQARIQRVVFGAFDPKGGAAGSALNILPGERLNHQV 132 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E G+ + I+ FF+ RR Sbjct: 133 ECQGGVLAESCGAILSAFFRARR 155 >gi|256372768|ref|YP_003110592.1| CMP/dCMP deaminase zinc-binding [Acidimicrobium ferrooxidans DSM 10331] gi|256009352|gb|ACU54919.1| CMP/dCMP deaminase zinc-binding [Acidimicrobium ferrooxidans DSM 10331] Length = 156 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 ++ A A++AA E+PVGAV V + +++ N E + AHAE+LA+ Sbjct: 9 WLDVAFGLAEDAARTAEVPVGAVVVRSGRVLGARHNETIERRSSLAHAELLALSDALADA 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + D+YVTLEPC MCA A+ LAR RR+ + A +PK G + +H Sbjct: 69 GDGYVLGADVYVTLEPCAMCAGALVLARARRVVFAAWDPKAGACGSLMNIAADPRLNHEL 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ +R+ +++ FF ERR Sbjct: 129 EIVGGVDAERAALLLRRFFSERR 151 >gi|315652559|ref|ZP_07905540.1| cytidine/deoxycytidylate deaminase [Eubacterium saburreum DSM 3986] gi|315485188|gb|EFU75589.1| cytidine/deoxycytidylate deaminase [Eubacterium saburreum DSM 3986] Length = 157 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 44/108 (40%), Positives = 67/108 (62%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + + F+ A+++A+ A ++P+G V V +KII+R NR + K +HAEI+AI+ Sbjct: 1 MYRDDYFLKEAVKQAKKALSIGDVPIGCVIVFEDKIIARGYNRRNKDKSTLSHAEIIAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 C+ + L + +Y+TLEPC MCA AI +RI+R GA NPK G Sbjct: 61 KACKKMGDWRLEDCTMYITLEPCPMCAGAIVQSRIKRAVLGAMNPKAG 108 >gi|302672151|ref|YP_003832111.1| CMP/dCMP deaminase zinc-binding domain-containing protein [Butyrivibrio proteoclasticus B316] gi|302396624|gb|ADL35529.1| CMP/dCMP deaminase zinc-binding domain-containing protein [Butyrivibrio proteoclasticus B316] Length = 190 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 74/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ +A+ A + E+P+G V V KII R NR K AHAEI AI+ +++ Sbjct: 30 FMKAAITQARKAYVLGEVPIGCVIVYEGKIIGRGYNRRNTDKTTLAHAEITAIKRAGKVI 89 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA AI ARI + A NPK G + +H Sbjct: 90 GDWRLEGCKLYVTLEPCQMCAGAIVQARIPEVIMAAENPKAGCAGSVLDILNNPGFNHQV 149 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + +++++FF E R Sbjct: 150 QVKRGVLKDECAKMLKEFFVELR 172 >gi|302552546|ref|ZP_07304888.1| deaminase [Streptomyces viridochromogenes DSM 40736] gi|302470164|gb|EFL33257.1| deaminase [Streptomyces viridochromogenes DSM 40736] Length = 143 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 77/143 (53%), Gaps = 2/143 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELK-DVTAHAEILAIRMGCRI 65 M AL+EA A ++PVGAV + + + +G+ RE D TAHAE+LA+R Sbjct: 1 MRLALDEAAGAVRGGDVPVGAVVLAPDGTTVLASGHNEREAGGDPTAHAELLALRRAAAE 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L L VTLEPCTMCA AI +R+ RL YGA + K G + + +H Sbjct: 61 LGTWRLAGCTLVVTLEPCTMCAGAIQQSRVDRLVYGARDEKAGAVGSLWDLVRDRRLNHR 120 Query: 126 PEIYPGISEQRSRQIIQDFFKER 148 PE+ G+ + Q++ +FF+ R Sbjct: 121 PEVIEGVLAEECAQLLTEFFRAR 143 >gi|254513988|ref|ZP_05126049.1| tRNA-specific adenosine deaminase [gamma proteobacterium NOR5-3] gi|219676231|gb|EED32596.1| tRNA-specific adenosine deaminase [gamma proteobacterium NOR5-3] Length = 150 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M ++FM AL+ AQ AA R E+PVGAV V ++I+ N D TAHAEI A+R Sbjct: 1 MSAHDLFMLRALDLAQEAASRGEVPVGAVVVEGDRILGEGRNAQIASMDPTAHAEINALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ +P LYVTLEPC+MC A+ ARI + + A P+ G + + Sbjct: 61 AASALVKNYRIPGATLYVTLEPCSMCCGALVHARISTVVFAAREPRAGAVVSTRSLLDET 120 Query: 121 TCHHSPEIYPGISEQ-RSRQIIQDFFKERR 149 +H + S +++ FF+ERR Sbjct: 121 AFNHRVAWLEAVEHAPASATLLRSFFRERR 150 >gi|206901944|ref|YP_002250953.1| tRNA-specific adenosine deaminase [Dictyoglomus thermophilum H-6-12] gi|206741047|gb|ACI20105.1| tRNA-specific adenosine deaminase [Dictyoglomus thermophilum H-6-12] Length = 156 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 77/147 (52%), Gaps = 6/147 (4%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EA+ A + E+PVGAV V N KII R N K HAEI+AI + Sbjct: 10 SFFMHEAIKEAEKALKKGEVPVGAVVVFNEKIIGRGYNLRETKKSPILHAEIIAIEKAVK 69 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 ++ L LYVTLEPC MC AI +RI RL YG N + G T+F + Sbjct: 70 KINDWRLYNCTLYVTLEPCIMCFGAILNSRIDRLVYGTENLEEG----FTKFLNVDNYRK 125 Query: 125 SP--EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + + ++++FFK R Sbjct: 126 WQLREIISGVEKDKCEALLKEFFKNVR 152 >gi|302325469|gb|ADL24670.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 155 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 53/142 (37%), Positives = 74/142 (52%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL +AQ A EIP+G V V + +I + N+ +LKD TAHAEI+AI L Sbjct: 1 MRMALRQAQIAFDMKEIPIGCVIVKDGVVIGKGYNQVEQLKDATAHAEIIAIGTAASTLD 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L LYVTLEPC MCA AI +R+ R+ YG+ + + GG T + E Sbjct: 61 NWRLDGCTLYVTLEPCPMCAGAILNSRVSRIVYGSPDSRFGGCGTTIDVITGNALKRAVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + GI +++ FF++ R Sbjct: 121 VTGGILADECLGLLKGFFQQMR 142 >gi|242095760|ref|XP_002438370.1| hypothetical protein SORBIDRAFT_10g014230 [Sorghum bicolor] gi|241916593|gb|EER89737.1| hypothetical protein SORBIDRAFT_10g014230 [Sorghum bicolor] Length = 1607 Score = 93.6 bits (231), Expect = 8e-18, Method: Composition-based stats. Identities = 65/167 (38%), Positives = 84/167 (50%), Gaps = 19/167 (11%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +FM AL EAQ AA E+PVGAV V N +II+R N +L+D TAHAEI+ IR Sbjct: 1407 KVDELFMREALLEAQRAADIWEVPVGAVLVQNGEIIARGCNLVEDLRDSTAHAEIVCIRE 1466 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY---- 117 L L + LYVTLEPC MCA AI ARI + +GA N G + + + Sbjct: 1467 ASNKLKTWRLADTTLYVTLEPCAMCAGAILQARIDTVVWGAPNKLLGADGSWVRLFPGDG 1526 Query: 118 ---TLATCHHSPEIYP------------GISEQRSRQIIQDFFKERR 149 TL + + S P G+ +I+Q FF+ RR Sbjct: 1527 QTNTLDSTNQSKAAGPVHPFHPKITIRRGVLSTECSEIMQQFFQLRR 1573 >gi|15612596|ref|NP_240899.1| Cu binding protein (Mn oxidation) [Bacillus halodurans C-125] gi|10172645|dbj|BAB03752.1| Cu binding protein (Mn oxidation) [Bacillus halodurans C-125] Length = 159 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 1/150 (0%) Query: 1 MKKGNVF-MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M+K +++ M AL +A A E+P+GAV V + ++++A N + AHAE+LAI Sbjct: 1 MQKDDLYYMREALVQADEAERLGEVPIGAVIVKDGVVVAKAYNLREINQQAIAHAELLAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 C+ L L LYVTLEPC MCA AI +RI R+ YGA++PK G Sbjct: 61 EKACKALGTWRLTGCTLYVTLEPCPMCAGAIVQSRIERVVYGATDPKAGCAGTLMNLLNE 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ Q + FF++ R Sbjct: 121 ERFNHQTIVESGVLEEECSQRLTAFFRKLR 150 >gi|294630214|ref|ZP_06708774.1| cytidine and deoxycytidylate deaminase [Streptomyces sp. e14] gi|292833547|gb|EFF91896.1| cytidine and deoxycytidylate deaminase [Streptomyces sp. e14] Length = 142 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66 M AL EA+ A ++PVGAV + + + AG+ RE D TAHAE+LAIR + Sbjct: 1 MRLALAEARRAVEGGDVPVGAVVLSADGAVLGAGHNEREATGDPTAHAEVLAIRRAAERV 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPCTMCA A+ L+R+ R+ YGA + K G + +H P Sbjct: 61 GEWRLSGCTLVVTLEPCTMCAGALVLSRVDRVVYGARDEKAGAAGSLWDVVRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 E+ G+ + ++ +FF+ R Sbjct: 121 EVIEGVLAEDCAALLTEFFRAR 142 >gi|313885505|ref|ZP_07819255.1| cytidine and deoxycytidylate deaminase zinc-binding region [Eremococcus coleocola ACS-139-V-Col8] gi|312619235|gb|EFR30674.1| cytidine and deoxycytidylate deaminase zinc-binding region [Eremococcus coleocola ACS-139-V-Col8] Length = 175 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 73/144 (50%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL+EA A + +E+P+GAV V +I+ R N + HAE++AI + Sbjct: 17 TWMQEALKEADKALVLDEVPIGAVLVYQGQIVGRGHNVRESQERALGHAELMAIETANQQ 76 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L E LYVTLEPC MCA A+ RI+ + YGAS+ K G +H Sbjct: 77 LGHWRLEEASLYVTLEPCPMCAGALMNCRIKEVIYGASDLKAGCAGTLMNLLEEDRFNHR 136 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 ++ G+ EQ + FFK+ R Sbjct: 137 AQVIQGVLEQECSHKLSQFFKDLR 160 >gi|253998683|ref|YP_003050746.1| CMP/dCMP deaminase zinc-binding [Methylovorus sp. SIP3-4] gi|253985362|gb|ACT50219.1| CMP/dCMP deaminase zinc-binding [Methylovorus sp. SIP3-4] Length = 175 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 53/128 (41%), Positives = 67/128 (52%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGA+ VL+ KII R N D TAHAEI A+R + L LYVTLE Sbjct: 34 GEVPVGALVVLDGKIIGRGMNAPIGSHDPTAHAEIQAMREAAAAIGNYRLVGCTLYVTLE 93 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC+ AI ARI RL YGA +PK G + + +H E+ GI + ++ Sbjct: 94 PCAMCSGAIQHARIARLVYGARDPKTGSCGSVIDLMAESRLNHHTEVAGGILAEECGSML 153 Query: 142 QDFFKERR 149 FF RR Sbjct: 154 SRFFSARR 161 >gi|296314748|ref|ZP_06864689.1| tRNA-specific adenosine deaminase [Neisseria polysaccharea ATCC 43768] gi|296838389|gb|EFH22327.1| tRNA-specific adenosine deaminase [Neisseria polysaccharea ATCC 43768] Length = 239 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ + Sbjct: 95 FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSCHAEINALAQAGSEM 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARI+R+ YGA+ PK G + + + Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIKRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237 >gi|160900241|ref|YP_001565823.1| CMP/dCMP deaminase [Delftia acidovorans SPH-1] gi|160365825|gb|ABX37438.1| CMP/dCMP deaminase zinc-binding [Delftia acidovorans SPH-1] Length = 475 Score = 93.6 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 48/127 (37%), Positives = 70/127 (55%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V + I+ + N D TAHAE+LA+R L L + LYVTLEP Sbjct: 52 EVPVGAVIVKDGAIVGQGRNAPVAQGDPTAHAEVLALRDAAARLGNYRLDDCTLYVTLEP 111 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 CTMC+ A+ AR+ R+ YGA+ P+ G + + L +H ++ G+ ++ Sbjct: 112 CTMCSGAMLHARLGRVVYGAAEPRTGAAGSVLDVFALPQINHHTQVTRGVLAGECAALMS 171 Query: 143 DFFKERR 149 DFF+ RR Sbjct: 172 DFFRTRR 178 >gi|261377687|ref|ZP_05982260.1| tRNA-specific adenosine deaminase [Neisseria cinerea ATCC 14685] gi|269145955|gb|EEZ72373.1| tRNA-specific adenosine deaminase [Neisseria cinerea ATCC 14685] Length = 239 Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ +AL EIPVGAV V + KII+ A N +V+ HAEI A+ + Sbjct: 95 FMRQALVQAEMSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQASSEM 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARI+R+ YGA PK G + + + Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIKRVIYGAVEPKTGAAGSIVNLFADKRLNTHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 215 AIRGGILQEECRSVLSCFFQNKR 237 >gi|71280259|ref|YP_270337.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Colwellia psychrerythraea 34H] gi|71145999|gb|AAZ26472.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Colwellia psychrerythraea 34H] Length = 182 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/140 (39%), Positives = 72/140 (51%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A E AQ A +EIPVGAV V KII N++ L D ++HAE+ AIR Sbjct: 24 TFMRRAFELAQQAEQHDEIPVGAVVVHQGKIIGEGFNQSIMLNDPSSHAEMNAIRQAGEF 83 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L+ L + LYVTLEPC MCA + +RI RL Y S+ K G + +H Sbjct: 84 LNNYRLLDCTLYVTLEPCPMCAGLLVHSRINRLVYACSDLKTGAAGSAFNLVNNPQLNHQ 143 Query: 126 PEIYPGISEQRSRQIIQDFF 145 E+ I E+ Q++ FF Sbjct: 144 LEVCSNILEEECSQLLSAFF 163 >gi|304439146|ref|ZP_07399064.1| tRNA-specific adenosine deaminase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372278|gb|EFM25866.1| tRNA-specific adenosine deaminase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 147 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 51/142 (35%), Positives = 71/142 (50%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ + R EIPVGAV VL+ K++ N L D T HAE+ A++M + L Sbjct: 1 MKFALHLAKKSYRRGEIPVGAVVVLHGKVVGYGYNLKETLNDATEHAELRALKMAAKTLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L +Y TLEPC MCA A+ L RI +L GA +P+ G + +H + Sbjct: 61 TYHLEGTKMYTTLEPCAMCAGAMILFRIDKLIIGAKSPRMGAAGSNLNILDREGFNHKVK 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + I ++I FFK R Sbjct: 121 VEYSIYGDECSKLISKFFKNVR 142 >gi|260773318|ref|ZP_05882234.1| tRNA-specific adenosine-34 deaminase [Vibrio metschnikovii CIP 69.14] gi|260612457|gb|EEX37660.1| tRNA-specific adenosine-34 deaminase [Vibrio metschnikovii CIP 69.14] Length = 165 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 69/126 (54%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V + ++I+ NR+ D TAHAEI +R + L L + LYVTLEPC Sbjct: 17 VPVGAVLVKDGQVIAEGWNRSIGGHDATAHAEIQVLRQAGQALQNYRLLDTTLYVTLEPC 76 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA A+ +R+ R+ YGA + K G + +H I G+ E++ R +Q Sbjct: 77 PMCAGALLHSRVARIVYGAPDLKAGAAGTVLNLFASQAAYHYAVIEKGLLEEQCRTQLQA 136 Query: 144 FFKERR 149 FFK RR Sbjct: 137 FFKRRR 142 >gi|152989527|ref|YP_001346733.1| hypothetical protein PSPA7_1349 [Pseudomonas aeruginosa PA7] gi|150964685|gb|ABR86710.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 182 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/126 (39%), Positives = 69/126 (54%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +II R N+ D +AHAE++AIRM LP LYVTLEPC Sbjct: 48 VPVGAVLVREGEIIGRGFNQPISSHDPSAHAEMVAIRMAAAEAGNYRLPGSTLYVTLEPC 107 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MC+ + ARI+RL YG PK G +E+ +F+ +H + G+ + Q + Sbjct: 108 GMCSGLLVHARIQRLVYGTLEPKSGAVESRGRFFEQEHLNHRVMVEGGVLAEECSQALSA 167 Query: 144 FFKERR 149 FF+ RR Sbjct: 168 FFRARR 173 >gi|255527107|ref|ZP_05393995.1| CMP/dCMP deaminase zinc-binding [Clostridium carboxidivorans P7] gi|296187896|ref|ZP_06856289.1| cytidine and deoxycytidylate deaminase zinc-binding region [Clostridium carboxidivorans P7] gi|255509209|gb|EET85561.1| CMP/dCMP deaminase zinc-binding [Clostridium carboxidivorans P7] gi|296047517|gb|EFG86958.1| cytidine and deoxycytidylate deaminase zinc-binding region [Clostridium carboxidivorans P7] Length = 145 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 77/143 (53%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA+ + + E+PVG V V +N II+RA N L+D AHAEILAI+ + Sbjct: 4 FMREAIKEAEKSLVLGEVPVGVVIVKDNIIIARAHNLRETLQDTLAHAEILAIKEASQYT 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +YVTLEPC MCA AI +RI +Y G P G + + Sbjct: 64 NNWRLSGCSMYVTLEPCPMCAGAILQSRISNVYIGTFEPNTGACGSVINILQNDNLNRWT 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +Y E+ S I+++FF ++R Sbjct: 124 NVYWNYDEKCS-NILEEFFSKKR 145 >gi|297158628|gb|ADI08340.1| cytidine/deoxycytidine deaminase [Streptomyces bingchenggensis BCW-1] Length = 144 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 75/143 (52%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66 M ALEEA A ++PVGAV + + G RE D TAHAE+LA+R L Sbjct: 1 MRLALEEAARAPETGDVPVGAVVLGPDGSPLGHGRNEREAHGDPTAHAEVLALRDAAGRL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA AI L+R+ R+ YGA++ K G + + +H P Sbjct: 61 GSWRLTGCTLVVTLEPCTMCAGAIVLSRVDRVVYGATDDKAGAVGSLWDVVRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ PG+ + ++ FF+ R Sbjct: 121 EVVPGVLADQCAALLTAFFRAPR 143 >gi|326335838|ref|ZP_08202017.1| zinc-binding domain protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691982|gb|EGD33942.1| zinc-binding domain protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 145 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 6/149 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM AL+EA+ A + E+PVGA+ +N II++ N L DVTAHAEI AI Sbjct: 1 MLSDTYFMQKALQEAEIAFEQGEVPVGAIITINEIIIAKTHNLTERLGDVTAHAEIQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L LYVTLEPC MCA A+ ++I ++ Y +++ + G G Sbjct: 61 SASEYMGGKYLTNCTLYVTLEPCVMCAGALYWSQIGKIVYASTDERRGYHLYGN------ 114 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI E+ S Q+++ FF+++R Sbjct: 115 LLHPKTEVIHGILEKESSQLLKKFFQQKR 143 >gi|291295391|ref|YP_003506789.1| tRNA(Ile)-lysidine synthetase [Meiothermus ruber DSM 1279] gi|290470350|gb|ADD27769.1| tRNA(Ile)-lysidine synthetase [Meiothermus ruber DSM 1279] Length = 521 Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 50/142 (35%), Positives = 80/142 (56%), Gaps = 7/142 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALE+A+ A E+P+GAV V + ++++ A N+ + D TAHAE+LA++ Sbjct: 384 MRSALEQARLAQQAGEVPIGAVVVWDGEVLAEAHNQVEQQCDATAHAELLALQQALHKRH 443 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 ++LP +YVTLEPC MC A+ A++RR+ Y N K G + T+ E Sbjct: 444 SKVLPGATVYVTLEPCPMCFGALMEAQVRRVVYAVENLKAGAV-------TVHRMKPPFE 496 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 G E+ S ++++DFF ++R Sbjct: 497 WEGGWLERESAKLLRDFFSQKR 518 >gi|298530999|ref|ZP_07018400.1| CMP/dCMP deaminase zinc-binding [Desulfonatronospira thiodismutans ASO3-1] gi|298509022|gb|EFI32927.1| CMP/dCMP deaminase zinc-binding [Desulfonatronospira thiodismutans ASO3-1] Length = 171 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/146 (38%), Positives = 76/146 (52%), Gaps = 2/146 (1%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 V M AL+EA A R E+PVGAV +I++ NR EL D TAHAEI+A+R Sbjct: 24 VLMQEALKEAGKARSRGEVPVGAVLADAGTGEILAGGSNRCIELNDPTAHAEIIALRRAG 83 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + LP L VTLEPC MC AI+ ARI L YG +P G + + Sbjct: 84 QARGNYRLPGTVLAVTLEPCLMCLGAIAQARIDGLVYGPRDPGAGALFSRPDILDFVWLS 143 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H I I + +++Q+FF+++R Sbjct: 144 HKFWIVENILKDECLELLQNFFRDKR 169 >gi|198283023|ref|YP_002219344.1| CMP/dCMP deaminase zinc-binding [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665839|ref|YP_002425229.1| cytidine and deoxycytidylate deaminase family protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247544|gb|ACH83137.1| CMP/dCMP deaminase zinc-binding [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518052|gb|ACK78638.1| cytidine and deoxycytidylate deaminase family protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 177 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 77/144 (53%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M+ AL+ A AA + E+PVGAV V + +++ A N D +AHAE+ +R R Sbjct: 14 WMALALDYAARAAGQGEVPVGAVLVDVGGHLLAAAHNTPVRDHDPSAHAEMRVLRQAARS 73 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LYVTLEPC MC A+ AR+ RL YGA +PK G +E+ +H Sbjct: 74 LQNYRLTGTTLYVTLEPCVMCVGALLHARVARLVYGAPDPKAGAVESLYHLLEDDRFNHR 133 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 G+ S +++DFF+ RR Sbjct: 134 VMAQGGLLAGPSATLLRDFFQARR 157 >gi|225076485|ref|ZP_03719684.1| hypothetical protein NEIFLAOT_01531 [Neisseria flavescens NRL30031/H210] gi|224952164|gb|EEG33373.1| hypothetical protein NEIFLAOT_01531 [Neisseria flavescens NRL30031/H210] Length = 240 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E+A+ +A E+PVGAV V K I+ A N +V+ HAEI A+ + L Sbjct: 95 FMRLAIEQARQSATLGEVPVGAVIVYQGKAIAAAHNTCIGDHNVSHHAEINALAAAGKAL 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + D+Y+TLEPC+MCA+A+ AR+ R+ YGA+ K G + + + Sbjct: 155 QNYRLEDCDVYITLEPCSMCASALIQARVGRVIYGAAEAKTGAAGSVVDLFADKRLNKHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I I + + ++QDFF +R Sbjct: 215 AILGSILAEECQSVLQDFFAAKR 237 >gi|153815558|ref|ZP_01968226.1| hypothetical protein RUMTOR_01794 [Ruminococcus torques ATCC 27756] gi|317502188|ref|ZP_07960362.1| tRNA-specific adenosine deaminase [Lachnospiraceae bacterium 8_1_57FAA] gi|331088753|ref|ZP_08337663.1| hypothetical protein HMPREF1025_01246 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847200|gb|EDK24118.1| hypothetical protein RUMTOR_01794 [Ruminococcus torques ATCC 27756] gi|316896397|gb|EFV18494.1| tRNA-specific adenosine deaminase [Lachnospiraceae bacterium 8_1_57FAA] gi|330407276|gb|EGG86779.1| hypothetical protein HMPREF1025_01246 [Lachnospiraceae bacterium 3_1_46FAA] Length = 162 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 78/149 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +K +M A+++AQ A NE P+G V V KII R NR KD AHAEI AI+ Sbjct: 7 LKLDEKYMRAAIKQAQKAYAINETPIGCVIVYEGKIIGRGYNRRNTDKDPLAHAEIKAIK 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L + +YVTLEPC MCA AI +R+ R+ G NPK G + + Sbjct: 67 KASKKMGDWRLEQCTMYVTLEPCQMCAGAIIQSRLTRVVVGCMNPKAGCAGSVLNLLDIK 126 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ FF+E R Sbjct: 127 QFNHQAELTTGVLEEECSALMTGFFRELR 155 >gi|304311855|ref|YP_003811453.1| Cytidine/deoxycytidylate deaminase, zinc-binding protein [gamma proteobacterium HdN1] gi|301797588|emb|CBL45809.1| Cytidine/deoxycytidylate deaminase, zinc-binding protein [gamma proteobacterium HdN1] Length = 171 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 75/143 (52%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V + + I N D TAHAEI A+R R + Sbjct: 22 WMERALALARQGAEAGEVPVGAVVVRDGEAIGEGFNCPIGTHDPTAHAEICALRAAGRAI 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYV+LEPC MCA AI ARI R+ Y A PK G + + F+ ++ Sbjct: 82 ENYRLAGATLYVSLEPCAMCAGAIVHARIDRVVYAAMEPKAGAVASTQNFFEQPQLNYRV 141 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ Q + + ++ FFK+RR Sbjct: 142 KAEGGLLNQEAGEQLRTFFKDRR 164 >gi|269217562|ref|ZP_06161416.1| tRNA-specific adenosine deaminase [Actinomyces sp. oral taxon 848 str. F0332] gi|269212497|gb|EEZ78837.1| tRNA-specific adenosine deaminase [Actinomyces sp. oral taxon 848 str. F0332] Length = 166 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 49/139 (35%), Positives = 73/139 (52%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 ++ A+E A AAL ++PVGA+ V + ++ N D HAEI A+R + + Sbjct: 26 WIGRAMELADRAALAGDVPVGALVVRGSAVLGVGWNTREARNDPAGHAEIAALREAAQAV 85 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L DLYVTLEPCTMCA AI +R+ R+ +GA +PK G + A +H Sbjct: 86 GDWRLEGCDLYVTLEPCTMCAGAIVASRVARVVFGAWDPKAGAAGSVRDVLRDARLNHRV 145 Query: 127 EIYPGISEQRSRQIIQDFF 145 E+ G+ E + ++ FF Sbjct: 146 EVVGGVREDECSRQLRAFF 164 >gi|217967615|ref|YP_002353121.1| CMP/dCMP deaminase zinc-binding [Dictyoglomus turgidum DSM 6724] gi|217336714|gb|ACK42507.1| CMP/dCMP deaminase zinc-binding [Dictyoglomus turgidum DSM 6724] Length = 156 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 77/145 (53%), Gaps = 6/145 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA+ A + E+PVGAV V N +I+ R N K+ +HAE++AI + L Sbjct: 12 FMHEAIKEAKKALRKGEVPVGAVIVYNGQIVGRGYNLRESKKNPISHAEMIAIEKAAKKL 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MC AI +RI RL YG N + E TQF + Sbjct: 72 KGWRLCNCTLYVTLEPCIMCFGAILNSRISRLVYGTENRE----EGFTQFVNIRDYKKWK 127 Query: 127 --EIYPGISEQRSRQIIQDFFKERR 149 EI GI + ++++FFK+ R Sbjct: 128 DIEIISGIKKDVCESLLKEFFKDMR 152 >gi|325191112|emb|CCA25598.1| SUMO ligase putative [Albugo laibachii Nc14] Length = 196 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 57/147 (38%), Positives = 83/147 (56%), Gaps = 9/147 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A +R E+PVG VAV N+IIS A NR EL + T HAE++AI I+ Sbjct: 14 FMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY---IV 70 Query: 67 S-----QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-LA 120 S + I E YVT EPC MCAAA+ ++ R+ +G N + GG + + A Sbjct: 71 SNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEPTA 130 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147 + +PGI + +++Q F+++ Sbjct: 131 NIPRTFSCHPGILRIEAIELLQRFYEQ 157 >gi|167464544|ref|ZP_02329633.1| possible nucleoside deaminase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 152 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 75/149 (50%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ +M A+ EA A +E+P+GAV V +II R N D TAHAE++AIR Sbjct: 1 MEEHEQWMQEAISEALKAETIHEVPIGAVIVHEGRIIGRGHNLRETSMDPTAHAEMIAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L LYVTLEPC MCA AI +RI R+ YG +PK G Sbjct: 61 EASEYLRAWRLLNCTLYVTLEPCPMCAGAIVQSRILRVVYGTIDPKAGCAGTLMNLLQED 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI + ++ FF++ R Sbjct: 121 RFNHRVEVINGILREECSSLLTSFFRKLR 149 >gi|221195061|ref|ZP_03568117.1| tRNA-specific adenosine deaminase [Atopobium rimae ATCC 49626] gi|221184964|gb|EEE17355.1| tRNA-specific adenosine deaminase [Atopobium rimae ATCC 49626] Length = 198 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA AA E+P+GAV V + ++I+ A NR +AHAE LA+ R+L Sbjct: 47 YMRLALSEAAAAAAEGEVPIGAVVVCDGEVIASAHNRREVDNSPSAHAEFLAMEEASRVL 106 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +YVTLEPC MCA + +RI R +GA +PKGG + + +H Sbjct: 107 KRWRLTGCTVYVTLEPCLMCAGLMVNSRIDRCVFGACDPKGGALGTLYDVSCDSRLNHEF 166 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + ++ FF+ERR Sbjct: 167 QVTSGVLANEAAAQLKAFFRERR 189 >gi|254390387|ref|ZP_05005604.1| deaminase [Streptomyces clavuligerus ATCC 27064] gi|197704091|gb|EDY49903.1| deaminase [Streptomyces clavuligerus ATCC 27064] Length = 142 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/128 (39%), Positives = 72/128 (56%), Gaps = 1/128 (0%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PVGAV + + G+ REL D TAHAE+LAIR R + L + L VTL Sbjct: 15 GDVPVGAVVLAADGTRLATGHNERELTGDPTAHAEVLAIRRAARRIGGWRLSDCTLVVTL 74 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA AI+ +R+ R+ YGA + K G + + +H PE+ G+ E ++ Sbjct: 75 EPCTMCAGAITQSRVGRVVYGARDEKAGAVGSLWDVVRDRRLNHRPEVIIGVLEPECARL 134 Query: 141 IQDFFKER 148 + DFF+ R Sbjct: 135 MTDFFRHR 142 >gi|330830279|ref|YP_004393231.1| CMP/dCMP deaminase zinc-binding protein [Aeromonas veronii B565] gi|328805415|gb|AEB50614.1| CMP/dCMP deaminase zinc-binding protein [Aeromonas veronii B565] Length = 201 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A A EIPVGAV VL+ +++ NR+ D AHAE++AIR + L Sbjct: 41 WMRHAMALAARAEGIGEIPVGAVLVLDGQVVGEGWNRSISEHDACAHAEVMAIRAAGKQL 100 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC MCA A+ +R++R+ YGA + K G + + +HS Sbjct: 101 ANYRLLDTTLYVTLEPCCMCAGALIHSRVKRVVYGARDLKTGAAGSVFEILQDPRHNHSV 160 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + FFK RR Sbjct: 161 ELIGGVLADACSAQLSAFFKRRR 183 >gi|115468148|ref|NP_001057673.1| Os06g0489500 [Oryza sativa Japonica Group] gi|51535686|dbj|BAD37705.1| putative cytosine deaminase [Oryza sativa Japonica Group] gi|113595713|dbj|BAF19587.1| Os06g0489500 [Oryza sativa Japonica Group] Length = 1590 Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 64/167 (38%), Positives = 82/167 (49%), Gaps = 19/167 (11%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +FM AL EAQ AA E+PVGAV V N +II+R N +L+D TAHAEI+ IR Sbjct: 1388 KTDELFMREALHEAQRAADLWEVPVGAVLVQNGEIIARGCNLVEDLRDSTAHAEIVCIRE 1447 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG----------GIE 111 L L + LYVTLEPC MCA AI AR+ + +GA N G G Sbjct: 1448 ASNKLKTWRLADTTLYVTLEPCAMCAGAILQARVDTVVWGAPNKLLGADGSWVRLFPGDG 1507 Query: 112 NGTQFYTLATCHHSPEIYP---------GISEQRSRQIIQDFFKERR 149 + + T + ++P GI +I+Q FF RR Sbjct: 1508 QTSSLDSANTNQGAGPVHPFHPKISIRRGILSAECSEIMQQFFHLRR 1554 >gi|125555393|gb|EAZ00999.1| hypothetical protein OsI_23033 [Oryza sativa Indica Group] Length = 1593 Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 64/167 (38%), Positives = 82/167 (49%), Gaps = 19/167 (11%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +FM AL EAQ AA E+PVGAV V N +II+R N +L+D TAHAEI+ IR Sbjct: 1390 KTDELFMREALHEAQRAADLWEVPVGAVLVQNGEIIARGCNLVEDLRDSTAHAEIVCIRE 1449 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG----------GIE 111 L L + LYVTLEPC MCA AI AR+ + +GA N G G Sbjct: 1450 ASNKLKTWRLADTTLYVTLEPCAMCAGAILQARVDTVVWGAPNKLLGADGSWVRLFPGDG 1509 Query: 112 NGTQFYTLATCHHSPEIYP---------GISEQRSRQIIQDFFKERR 149 + + T + ++P GI +I+Q FF RR Sbjct: 1510 QTSSLDSANTNQGAGPVHPFHPKISIRRGILSAECSEIMQQFFHLRR 1556 >gi|125597284|gb|EAZ37064.1| hypothetical protein OsJ_21407 [Oryza sativa Japonica Group] Length = 1528 Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 64/167 (38%), Positives = 82/167 (49%), Gaps = 19/167 (11%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +FM AL EAQ AA E+PVGAV V N +II+R N +L+D TAHAEI+ IR Sbjct: 1326 KTDELFMREALHEAQRAADLWEVPVGAVLVQNGEIIARGCNLVEDLRDSTAHAEIVCIRE 1385 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG----------GIE 111 L L + LYVTLEPC MCA AI AR+ + +GA N G G Sbjct: 1386 ASNKLKTWRLADTTLYVTLEPCAMCAGAILQARVDTVVWGAPNKLLGADGSWVRLFPGDG 1445 Query: 112 NGTQFYTLATCHHSPEIYP---------GISEQRSRQIIQDFFKERR 149 + + T + ++P GI +I+Q FF RR Sbjct: 1446 QTSSLDSANTNQGAGPVHPFHPKISIRRGILSAECSEIMQQFFHLRR 1492 >gi|170725917|ref|YP_001759943.1| zinc-binding CMP/dCMP deaminase [Shewanella woodyi ATCC 51908] gi|169811264|gb|ACA85848.1| CMP/dCMP deaminase zinc-binding [Shewanella woodyi ATCC 51908] Length = 169 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A++ A A + E+PVGA+ V N+++IS N D +AHAE+ +R +++ Sbjct: 10 YMKLAMDMAAKAEEKGEVPVGAILVKNDEVISAGFNFCIGSHDPSAHAEMQCLRQAGKVI 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +R+ RL +GAS+ K G + +H Sbjct: 70 ENYRLLDTTLYVTLEPCAMCAGAMVHSRVSRLVFGASDAKTGAAGTVIDLVRHSAFNHQL 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E + + FF+ RR Sbjct: 130 EVTQGVLELECAEQLSQFFRRRR 152 >gi|313200758|ref|YP_004039416.1| cmp/dcmp deaminase zinc-binding protein [Methylovorus sp. MP688] gi|312440074|gb|ADQ84180.1| CMP/dCMP deaminase zinc-binding protein [Methylovorus sp. MP688] Length = 175 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/128 (41%), Positives = 66/128 (51%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGA+ VL+ II R N D TAHAEI A+R + L LYVTLE Sbjct: 34 GEVPVGALVVLDGAIIGRGMNAPIGRHDPTAHAEIQAMREAASAIGNYRLVGCTLYVTLE 93 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC+ AI ARI RL YGA +PK G + +H E+ GI + S ++ Sbjct: 94 PCAMCSGAIQHARIARLVYGARDPKTGSCGSVIDLMAEPRLNHHTEVAGGILAEESGSML 153 Query: 142 QDFFKERR 149 FF RR Sbjct: 154 SRFFSARR 161 >gi|307610417|emb|CBW99987.1| hypothetical protein LPW_17441 [Legionella pneumophila 130b] Length = 147 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 78/144 (54%), Gaps = 3/144 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A E+A A E+PVGAV V +N+++ N + D + HAEI AIR R Sbjct: 6 WMQLAYEQAVIARNEGEVPVGAVLVSKDNQLLGVGRNVIEKSHDPSDHAEIRAIRQASRK 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L+ L + LYVTLEPC MCA + ARI+RL + + K G G+ F L +HS Sbjct: 66 LNNHRLLDTTLYVTLEPCVMCAGLMVHARIKRLVFATRDFKAGAA--GSMFNVLHALNHS 123 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 I GI + Q++ DFF++ R Sbjct: 124 VLIDEGIMQAECSQLLSDFFRKLR 147 >gi|301058427|ref|ZP_07199448.1| cytidine and deoxycytidylate deaminase zinc-binding region [delta proteobacterium NaphS2] gi|300447483|gb|EFK11227.1| cytidine and deoxycytidylate deaminase zinc-binding region [delta proteobacterium NaphS2] Length = 159 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 77/144 (53%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL EA+ A + E+PVGAV A I+SRA N+ L D TAHAEILAIR C I Sbjct: 1 MMAQALLEAKKAYSKGEVPVGAVLADAQGYILSRAHNQPISLCDPTAHAEILAIRKACSI 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L T+EPC MC A +R+ + +GA + KGG + +H Sbjct: 61 CGNYRLTRCLLVATIEPCIMCMGAAIHSRVSTVIFGAHDVKGGAAGSLYDLSRDYRLNHR 120 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 EI G+ E R++++ FF+ RR Sbjct: 121 MEIVSGVREDECRELMRAFFRARR 144 >gi|222153804|ref|YP_002562981.1| deaminase [Streptococcus uberis 0140J] gi|222114617|emb|CAR43628.1| putative deaminase [Streptococcus uberis 0140J] Length = 167 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 75/143 (52%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ + + EIP+G V V +II R N E HAEI+AI + Sbjct: 11 FMREALKEAKKSLDKGEIPIGCVIVKEGRIIGRGHNAREERNQAIMHAEIMAINEANATV 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VT+EPC MC+ AI LARI ++ +GA N K GG + T +H Sbjct: 71 GNWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIFGAHNQKFGGAGSLYAILTDQRLNHRV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + I+Q FF+ R Sbjct: 131 ELETGLLAEECAAIMQTFFRAGR 153 >gi|172060929|ref|YP_001808581.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria MC40-6] gi|171993446|gb|ACB64365.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria MC40-6] Length = 159 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/124 (38%), Positives = 69/124 (55%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I+R N D +AHAE+ A+RM + L +P +LYVTLE Sbjct: 15 GEVPVGAVLVCGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLE 74 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI ARI R+ YGA++PK G + + +H E+ G+ + Sbjct: 75 PCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAAL 134 Query: 142 QDFF 145 + FF Sbjct: 135 KSFF 138 >gi|171320346|ref|ZP_02909387.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria MEX-5] gi|171094424|gb|EDT39487.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria MEX-5] Length = 159 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/124 (38%), Positives = 69/124 (55%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I+R N D +AHAE+ A+RM + L +P +LYVTLE Sbjct: 15 GEVPVGAVLVCGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLE 74 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI ARI R+ YGA++PK G + + +H E+ G+ + Sbjct: 75 PCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAAL 134 Query: 142 QDFF 145 + FF Sbjct: 135 KSFF 138 >gi|313472533|ref|ZP_07813023.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus jensenii 1153] gi|313448996|gb|EEQ68969.2| cytidine/deoxycytidylate deaminase family protein [Lactobacillus jensenii 1153] Length = 160 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 78/128 (60%), Gaps = 3/128 (2%) Query: 24 IPVGAVAVL-NNKIISRAGNRNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 +P+GA+ V + ++I R NR REL ++ T HAEILAI C+ L+ L + L+VTLE Sbjct: 27 VPIGAIVVAPDGQVIGRGYNR-RELDNIATHHAEILAINEACKNLNSWRLIDCSLFVTLE 85 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI AR++ ++YGA + K G + + + +H P++ G+ +++ ++ Sbjct: 86 PCAMCAGAIINARLKEVFYGAPDHKAGASGSVVDLFAVEKFNHHPQVIRGLYSEKASNML 145 Query: 142 QDFFKERR 149 +FF+ R Sbjct: 146 TNFFRAIR 153 >gi|113952793|ref|YP_730770.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. CC9311] gi|113880144|gb|ABI45102.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. CC9311] Length = 203 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIR 60 +K +M +E A+ R E+PV AV + ++ G REL D HAE++A+R Sbjct: 37 QKMQAWMGILIERARRFGERGEVPVSAVVLDHHGRCIGHGINQRELHHDPLGHAELMAVR 96 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR+ L + L VTLEPC MCA A+ AR+ ++ + A++PK G + + T Sbjct: 97 QACRLRGDWRLNDCTLLVTLEPCPMCAGALVQARVGQVIFAATDPKRGAMGSTINLATHI 156 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + HH + G+ + +++++ +FK+RR Sbjct: 157 SAHHRMTVIGGVLGEEAKEMLSSWFKQRR 185 >gi|332982859|ref|YP_004464300.1| tRNA-adenosine deaminase [Mahella australiensis 50-1 BON] gi|332700537|gb|AEE97478.1| tRNA-adenosine deaminase [Mahella australiensis 50-1 BON] Length = 156 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FMS A++EA+ AA E+P+GAV ++II R N+ L D TAHAE+LAIR + Sbjct: 11 FMSEAIKEAELAAAEGEVPIGAVVAKGDEIIGRGHNQVEGLHDATAHAEMLAIRQAMAAI 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +LY TLEPC MC A+ L RI +L YGA + K G + Sbjct: 71 NDWRLDGCELYTTLEPCAMCTGAMMLCRIEQLIYGAPDLKWGCAGTLYNLPRDRRFDRNI 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GI EQR ++++ FF+ RR Sbjct: 131 EIIAGIGEQRCEEMLKKFFENRR 153 >gi|28895070|ref|NP_801420.1| hypothetical protein SPs0158 [Streptococcus pyogenes SSI-1] gi|28810315|dbj|BAC63253.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] Length = 160 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/142 (37%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 1 MQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEANAHEG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + L+VT+EPC MC+ AI LARI + YGASN K GG ++ Q T +H + Sbjct: 61 NWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDERLNHRVQ 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ I+Q FF++ R Sbjct: 121 VERGLLAADCANIMQTFFRQGR 142 >gi|238855364|ref|ZP_04645676.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 269-3] gi|260664920|ref|ZP_05865771.1| tRNA-adenosine deaminase [Lactobacillus jensenii SJ-7A-US] gi|282934594|ref|ZP_06339841.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1] gi|238832025|gb|EEQ24350.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 269-3] gi|260561403|gb|EEX27376.1| tRNA-adenosine deaminase [Lactobacillus jensenii SJ-7A-US] gi|281301346|gb|EFA93643.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1] Length = 176 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 78/128 (60%), Gaps = 3/128 (2%) Query: 24 IPVGAVAVL-NNKIISRAGNRNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 +P+GA+ V + ++I R NR REL ++ T HAEILAI C+ L+ L + L+VTLE Sbjct: 27 VPIGAIVVAPDGQVIGRGYNR-RELDNIATHHAEILAINEACKNLNSWRLIDCSLFVTLE 85 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI AR++ ++YGA + K G + + + +H P++ G+ +++ ++ Sbjct: 86 PCAMCAGAIINARLKEVFYGAPDHKAGASGSVVDLFAVEKFNHHPQVIRGLYSEKASNML 145 Query: 142 QDFFKERR 149 +FF+ R Sbjct: 146 TNFFRAIR 153 >gi|224002957|ref|XP_002291150.1| hypothetical protein THAPSDRAFT_34714 [Thalassiosira pseudonana CCMP1335] gi|220972926|gb|EED91257.1| hypothetical protein THAPSDRAFT_34714 [Thalassiosira pseudonana CCMP1335] Length = 171 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/165 (34%), Positives = 85/165 (51%), Gaps = 23/165 (13%) Query: 8 MSCALEEAQNAALRNEIPVGAV-------------AVLNN-------KIISRAGNRNREL 47 M AL+EAQNA + E+P+GAV V+NN +I+SRA N Sbjct: 1 MELALQEAQNAWDKGEVPIGAVIVRELLSNATAGSTVMNNLHATRSFQILSRAHNLVETN 60 Query: 48 KDVTAHAEILAIRMG-CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 D ++HAE+LA+R G ++ + P LY TLEPC MC A+I RI + YGA++ + Sbjct: 61 IDASSHAELLALRQGSTKMQNWRFPPNSTLYTTLEPCPMCLASIQAFRIDNIVYGANDNR 120 Query: 107 GGGIENGTQFYTLAT--CHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + ++AT H + G+ ++ I+ FF+ERR Sbjct: 121 LGAVNTHMDLMSVATHPYHEVKSVIGGVRKEECGDILVQFFRERR 165 >gi|283457271|ref|YP_003361841.1| cytosine/adenosine deaminase [Rothia mucilaginosa DY-18] gi|283133256|dbj|BAI64021.1| cytosine/adenosine deaminase [Rothia mucilaginosa DY-18] Length = 175 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 76/146 (52%), Gaps = 5/146 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M+ AL E A R EIP+GAV V II AGN + D +AHAE+ AIR Sbjct: 31 WMAHALVEGAAAGERGEIPIGAVVVDEQGVIIGSAGNTREQEHDPSAHAEVNAIRQAAAC 90 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL--ATCH 123 Q L L VT+EPC MCA I +R+ + +GA K G G+++ L Sbjct: 91 RGQWRLDGCTLVVTVEPCLMCAGTILASRVSTVVFGAWEEKTGA--AGSRYDVLRDGRVA 148 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 +PE+Y G+ Q++ DFFKERR Sbjct: 149 PAPEVYAGVRADECAQLMVDFFKERR 174 >gi|220911573|ref|YP_002486882.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6] gi|219858451|gb|ACL38793.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6] Length = 168 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 51/140 (36%), Positives = 75/140 (53%), Gaps = 12/140 (8%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI---------- 70 ++P+GAV + + +++ NR EL D TAHAE++AIR L + Sbjct: 26 GDVPIGAVVLGPDGEVLGAGRNRREELGDPTAHAEVVAIRQAAEQLRERARVGRGLDDGW 85 Query: 71 -LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 L + L VTLEPC MCA AI LARI R+ +GA + K G + +H E+Y Sbjct: 86 RLSDCTLVVTLEPCAMCAGAIVLARIPRVVFGAWDEKAGAAGSVFDILRERRLNHWVEVY 145 Query: 130 PGISEQRSRQIIQDFFKERR 149 PG+ E+ S +++DFF + R Sbjct: 146 PGVREEESAVLLRDFFADHR 165 >gi|134096850|ref|YP_001102511.1| CMP/dCMP deaminase, zinc-binding [Saccharopolyspora erythraea NRRL 2338] gi|291005105|ref|ZP_06563078.1| CMP/dCMP deaminase, zinc-binding protein [Saccharopolyspora erythraea NRRL 2338] gi|133909473|emb|CAL99585.1| CMP/dCMP deaminase, zinc-binding [Saccharopolyspora erythraea NRRL 2338] Length = 155 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/145 (35%), Positives = 78/145 (53%), Gaps = 2/145 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + ALE A A ++P+GAV A + ++++R NR L D TAHAEILA+R + Sbjct: 11 LVRAALEVAPGALSTGDVPIGAVVAGPDGRVLARDHNRREALHDPTAHAEILALRAAAGV 70 Query: 66 LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L L VT+EPCTMCA A+ LAR+ R+ +G P+ G + + +H Sbjct: 71 LGDGWRLEGCTLAVTVEPCTMCAGALVLARVERVVFGCWEPRTGAVGSLWDVVRDRRLNH 130 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 PE+ G+ E +++ FF +R Sbjct: 131 RPEVVGGVLEAECSALLEAFFHGQR 155 >gi|294813865|ref|ZP_06772508.1| cytidine/deoxycytidine deaminase [Streptomyces clavuligerus ATCC 27064] gi|326442283|ref|ZP_08217017.1| deaminase [Streptomyces clavuligerus ATCC 27064] gi|294326464|gb|EFG08107.1| cytidine/deoxycytidine deaminase [Streptomyces clavuligerus ATCC 27064] Length = 199 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/128 (39%), Positives = 72/128 (56%), Gaps = 1/128 (0%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PVGAV + + G+ REL D TAHAE+LAIR R + L + L VTL Sbjct: 72 GDVPVGAVVLAADGTRLATGHNERELTGDPTAHAEVLAIRRAARRIGGWRLSDCTLVVTL 131 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA AI+ +R+ R+ YGA + K G + + +H PE+ G+ E ++ Sbjct: 132 EPCTMCAGAITQSRVGRVVYGARDEKAGAVGSLWDVVRDRRLNHRPEVIIGVLEPECARL 191 Query: 141 IQDFFKER 148 + DFF+ R Sbjct: 192 MTDFFRHR 199 >gi|28493718|ref|NP_787879.1| hypothetical protein TWT751 [Tropheryma whipplei str. Twist] gi|28572904|ref|NP_789684.1| hypothetical protein TW763 [Tropheryma whipplei TW08/27] gi|28411037|emb|CAD67422.1| conserved hypothetical protein (putative deaminase) [Tropheryma whipplei TW08/27] gi|28476760|gb|AAO44848.1| unknown [Tropheryma whipplei str. Twist] Length = 170 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 77/144 (53%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A A + EIPVGAV A +N K I+ N+ E KD T HAEI+AIR ++ Sbjct: 27 IMRKALCLAHAAGEKGEIPVGAVIADVNGKTIAEGFNKREESKDPTDHAEIIAIRKASQM 86 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + L+VT+EPCTMCA AI +RI R+ +GA N K G + + + + Sbjct: 87 LKDWRLSGLTLFVTMEPCTMCAGAIVTSRISRVVFGAFNNKTGSVGSRIDILRDEILNTN 146 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ ++ FF + R Sbjct: 147 IEVVSGVLISECEGVLAKFFADLR 170 >gi|329930226|ref|ZP_08283839.1| cytidine and deoxycytidylate deaminase zinc-binding region [Paenibacillus sp. HGF5] gi|328935248|gb|EGG31729.1| cytidine and deoxycytidylate deaminase zinc-binding region [Paenibacillus sp. HGF5] Length = 164 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 74/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ EA+ A E+P+GAV V ++II R N D TAHAE++AIR R L Sbjct: 19 WMREAIAEARKAEELGEVPIGAVIVRGDEIIGRGYNLRETTYDGTAHAEMVAIREASRHL 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI +R+ +L YG +PK G +H Sbjct: 79 GAWRLLDCRLYVTLEPCPMCAGAIVQSRVPQLIYGTGDPKAGCAGTLMNLLQEPRFNHRT 138 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ ++ FF+ R Sbjct: 139 HVVDGVLQEECASLLTQFFRRLR 161 >gi|42521861|ref|NP_967241.1| cytosine deaminase [Bdellovibrio bacteriovorus HD100] gi|39574391|emb|CAE77895.1| Cytosine deaminase [Bdellovibrio bacteriovorus HD100] Length = 313 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 68/129 (52%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 R E+PV A+ V +IS A N + HAE+LA+ + L + LYVTL Sbjct: 24 REEVPVAAIVVGPEGMISYAINTRERQQSPLGHAELLALHKASQKRGSWRLSDCTLYVTL 83 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA AI +RI R+ YGA + K G +E+ +H E+ GI E ++ Sbjct: 84 EPCVMCAGAIQQSRIARVVYGAKDVKAGAVESLYHILKDPRLNHQVEVSSGILEDDCSEL 143 Query: 141 IQDFFKERR 149 +QDFFK RR Sbjct: 144 LQDFFKGRR 152 >gi|302870406|ref|YP_003839043.1| CMP/dCMP deaminase [Micromonospora aurantiaca ATCC 27029] gi|302573265|gb|ADL49467.1| CMP/dCMP deaminase zinc-binding [Micromonospora aurantiaca ATCC 27029] Length = 210 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 1/126 (0%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 +++PVGAV + G REL D TAHAE+LA+R + L + L + L VTL Sbjct: 85 DDVPVGAVLYGPDGTELAIGRNERELTGDPTAHAEVLALRRAAQRLGRWRLDDCTLVVTL 144 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA AI+LAR+ + +GA PK G + + H PE+Y G+ E+ S + Sbjct: 145 EPCTMCAGAIALARVSTVVFGAWEPKTGAVGSLWDVLRDRRVTHRPEVYGGVLERESATL 204 Query: 141 IQDFFK 146 ++ FF+ Sbjct: 205 LRAFFR 210 >gi|313905719|ref|ZP_07839079.1| Cof-like hydrolase [Eubacterium cellulosolvens 6] gi|313469426|gb|EFR64768.1| Cof-like hydrolase [Eubacterium cellulosolvens 6] Length = 450 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ EA+ AA E+P+GAV V + +II+R NR + +HAE+ A+R + L Sbjct: 301 YMRAAIREAKRAASIGEVPIGAVIVRDGEIIARGYNRRNTDHNTLSHAELNALRKASKKL 360 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +YVT+EPC MCA A+ +RI ++ G +PK G + + +HS Sbjct: 361 GDWRLEGCTMYVTMEPCQMCAGALVQSRIDKVVIGCMSPKTGCAGSVMNLMQVPVFNHSV 420 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI E+ +I+ +FF+ R Sbjct: 421 ELEKGILEEECSRILTEFFENLR 443 >gi|54297635|ref|YP_124004.1| hypothetical protein lpp1686 [Legionella pneumophila str. Paris] gi|53751420|emb|CAH12838.1| hypothetical protein lpp1686 [Legionella pneumophila str. Paris] Length = 149 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 77/144 (53%), Gaps = 3/144 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A E+A A E+PVGAV V +N+++ N + D + HAEI AIR R Sbjct: 8 WMQLAYEQAVIARNEGEVPVGAVLVSKDNQLLGVGRNVIEKSHDPSDHAEIRAIRQASRK 67 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L+ L + LYVTLEPC MCA + ARI+RL + + K G G+ F L +HS Sbjct: 68 LNNHRLLDTTLYVTLEPCVMCAGLMVHARIKRLVFATRDFKAGAA--GSMFNVLHALNHS 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 I GI + Q++ DFF+ R Sbjct: 126 VLIDEGIMQAECSQLLSDFFRNLR 149 >gi|261403958|ref|YP_003240199.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus sp. Y412MC10] gi|261280421|gb|ACX62392.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus sp. Y412MC10] Length = 164 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 74/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ EA+ A E+P+GAV V ++II R N D TAHAE++AIR R L Sbjct: 19 WMREAIAEARKAEELGEVPIGAVIVRGDEIIGRGYNLRETTYDGTAHAEMVAIREASRHL 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI +R+ +L YG +PK G +H Sbjct: 79 GAWRLLDCRLYVTLEPCPMCAGAIVQSRVPQLIYGTGDPKAGCAGTLMNLLQEPRFNHRT 138 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ ++ FF+ R Sbjct: 139 HVVDGVLQEECASLLTQFFRRLR 161 >gi|148359260|ref|YP_001250467.1| deaminase [Legionella pneumophila str. Corby] gi|296107307|ref|YP_003619007.1| Cytosine/adenosine deaminase [Legionella pneumophila 2300/99 Alcoy] gi|148281033|gb|ABQ55121.1| deaminase [Legionella pneumophila str. Corby] gi|295649208|gb|ADG25055.1| Cytosine/adenosine deaminase [Legionella pneumophila 2300/99 Alcoy] Length = 147 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 77/144 (53%), Gaps = 3/144 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A E+A A E+PVGAV V +N+++ N + D + HAEI AIR R Sbjct: 6 WMQLAYEQAVIARNEGEVPVGAVLVSKDNQLLGVGRNVIEKSHDPSDHAEIRAIRQASRK 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L+ L + LYVTLEPC MCA + ARI+RL + + K G G+ F L +HS Sbjct: 66 LNNHRLLDTTLYVTLEPCVMCAGLMVHARIKRLVFATRDFKAGAA--GSMFNVLHALNHS 123 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 I GI + Q++ DFF+ R Sbjct: 124 VLIDEGIMQAECSQLLSDFFRNLR 147 >gi|325191110|emb|CCA25596.1| SUMO ligase putative [Albugo laibachii Nc14] Length = 1279 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/147 (38%), Positives = 83/147 (56%), Gaps = 9/147 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A +R E+PVG VAV N+IIS A NR EL + T HAE++AI I+ Sbjct: 1097 FMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY---IV 1153 Query: 67 S-----QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-LA 120 S + I E YVT EPC MCAAA+ ++ R+ +G N + GG + + A Sbjct: 1154 SNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEPTA 1213 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147 + +PGI + +++Q F+++ Sbjct: 1214 NIPRTFSCHPGILRIEAIELLQRFYEQ 1240 >gi|300853298|ref|YP_003778282.1| tRNA-specific adenosine deaminase [Clostridium ljungdahlii DSM 13528] gi|300433413|gb|ADK13180.1| tRNA-specific adenosine deaminase [Clostridium ljungdahlii DSM 13528] Length = 145 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 77/143 (53%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ +A+ E+PVGAV V +N+IIS N + VTAHAE+LAI+ IL Sbjct: 4 FMLEAIRQAKKGLKLGEVPVGAVIVKDNEIISSCHNLKETVGIVTAHAEMLAIQNASEIL 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S L +YVTLEPC MCA AI RI +LY G +P G + + Sbjct: 64 SNWRLTGCSMYVTLEPCPMCAGAILQCRINKLYIGTFDPTMGACGSVVNILQNRRLNRWV 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I +EQ S ++++ FFK RR Sbjct: 124 DIQWMYNEQCS-EMLEKFFKSRR 145 >gi|325191115|emb|CCA25601.1| SUMO ligase putative [Albugo laibachii Nc14] Length = 1298 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/147 (38%), Positives = 83/147 (56%), Gaps = 9/147 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A +R E+PVG VAV N+IIS A NR EL + T HAE++AI I+ Sbjct: 1116 FMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY---IV 1172 Query: 67 S-----QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY-TLA 120 S + I E YVT EPC MCAAA+ ++ R+ +G N + GG + + A Sbjct: 1173 SNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEPTA 1232 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147 + +PGI + +++Q F+++ Sbjct: 1233 NIPRTFSCHPGILRIEAIELLQRFYEQ 1259 >gi|325191114|emb|CCA25600.1| SUMO ligase putative [Albugo laibachii Nc14] Length = 1287 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/147 (38%), Positives = 83/147 (56%), Gaps = 9/147 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A +R E+PVG VAV N+IIS A NR EL + T HAE++AI I+ Sbjct: 1105 FMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY---IV 1161 Query: 67 S-----QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY-TLA 120 S + I E YVT EPC MCAAA+ ++ R+ +G N + GG + + A Sbjct: 1162 SNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEPTA 1221 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147 + +PGI + +++Q F+++ Sbjct: 1222 NIPRTFSCHPGILRIEAIELLQRFYEQ 1248 >gi|119775487|ref|YP_928227.1| cytidine/deoxycytidylate deaminase family protein [Shewanella amazonensis SB2B] gi|119767987|gb|ABM00558.1| tRNA-adenosine deaminase [Shewanella amazonensis SB2B] Length = 190 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FMS ALE A+ A R E+PVGAV V +I+ N N L D +AHAE+ +R R+L Sbjct: 30 FMSLALEAAKEAEARGEVPVGAVLVREGLVIATGYNHNIGLNDPSAHAEMQCLREAGRML 89 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA + +RI RL +GA + K G + +H Sbjct: 90 GNYRLLDTTLYVTLEPCAMCAGVMVHSRIERLVFGAKDEKTGAAGSVVDLVRHPAFNHQI 149 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + ++ DFF+ RR Sbjct: 150 QVEEGVLAEECSGMLSDFFRRRR 172 >gi|315657779|ref|ZP_07910659.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491576|gb|EFU81187.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 180 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK--DVTAHAEILAIRMGCRI 65 + A AQ A +IPVGAV + I++ G RE D +AHAEI+A+R Sbjct: 37 LDTAYRLAQKAGRAGDIPVGAVVLTPEGIVAGLGLNQRENPPYDPSAHAEIVALREAAGR 96 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L L TLEPCTMCA AI ARI RL +GA +PK G + + +H Sbjct: 97 LERWNLKGCTLVATLEPCTMCAGAIVNARISRLIFGAWDPKAGACGSIRDVVRDSRLNHQ 156 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E R + +++ FF ERR Sbjct: 157 VEVKGGVDEPRVKALLKAFFGERR 180 >gi|325191109|emb|CCA25595.1| SUMO ligase putative [Albugo laibachii Nc14] Length = 1295 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/147 (38%), Positives = 83/147 (56%), Gaps = 9/147 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A +R E+PVG VAV N+IIS A NR EL + T HAE++AI I+ Sbjct: 1113 FMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY---IV 1169 Query: 67 S-----QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY-TLA 120 S + I E YVT EPC MCAAA+ ++ R+ +G N + GG + + A Sbjct: 1170 SNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEPTA 1229 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147 + +PGI + +++Q F+++ Sbjct: 1230 NIPRTFSCHPGILRIEAIELLQRFYEQ 1256 >gi|127512231|ref|YP_001093428.1| CMP/dCMP deaminase, zinc-binding [Shewanella loihica PV-4] gi|126637526|gb|ABO23169.1| tRNA-adenosine deaminase [Shewanella loihica PV-4] Length = 178 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 51/147 (34%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K +M A+ A A LR E+PVGA+ V ++ +I+ N + D +AHAE+ IR Sbjct: 17 KDEAYMRQAMALAAQAELRGEVPVGALLVKDDSVIATGYNLSICRHDASAHAEMECIRAA 76 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +++ L + LYVTLEPC MCA A+ ARI RL +GA++ K G + + Sbjct: 77 GQVMENYRLLDTTLYVTLEPCAMCAGAMVHARIGRLVFGAADLKTGAAGSVVDLVRSSAF 136 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + + + FF+ RR Sbjct: 137 NHQLEVTAGVLAEDCGEQLSAFFRRRR 163 >gi|325191111|emb|CCA25597.1| SUMO ligase putative [Albugo laibachii Nc14] Length = 1290 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/147 (38%), Positives = 83/147 (56%), Gaps = 9/147 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A +R E+PVG VAV N+IIS A NR EL + T HAE++AI I+ Sbjct: 1108 FMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY---IV 1164 Query: 67 S-----QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY-TLA 120 S + I E YVT EPC MCAAA+ ++ R+ +G N + GG + + A Sbjct: 1165 SNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEPTA 1224 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147 + +PGI + +++Q F+++ Sbjct: 1225 NIPRTFSCHPGILRIEAIELLQRFYEQ 1251 >gi|322383121|ref|ZP_08056948.1| tRNA specific adenosine deaminase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152783|gb|EFX45409.1| tRNA specific adenosine deaminase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 157 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 72/143 (50%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ EA A +E+P+GAV V +II R N D TAHAE++AIR L Sbjct: 12 WMQEAISEALKAETIHEVPIGAVIVHEGRIIGRGHNLRETSMDPTAHAEMIAIREASEYL 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA AI +RI R+ YG +PK G +H Sbjct: 72 RAWRLLNCTLYVTLEPCPMCAGAIVQSRILRVVYGTIDPKAGCAGTLMNLLQEDRFNHRV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI + ++ FF++ R Sbjct: 132 EVINGILREECSSLLTSFFRKLR 154 >gi|315040523|ref|XP_003169639.1| tRNA-specific adenosine deaminase subunit TAD2 [Arthroderma gypseum CBS 118893] gi|311346329|gb|EFR05532.1| tRNA-specific adenosine deaminase subunit TAD2 [Arthroderma gypseum CBS 118893] Length = 189 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 51/145 (35%), Positives = 75/145 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + K VFM AL A+ A E PVG V V +K+I N + + T HAE LAI Sbjct: 7 LSKHEVFMKMALRMAETALAVGETPVGCVLVNKDKVIGSGMNDTNKSLNGTRHAEFLAIE 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + IL E DLYVT+EPC MCA+A+ R+R +Y+G +N + GG ++ Sbjct: 67 EALRSHPRSILHETDLYVTVEPCIMCASALRQYRVRSVYFGCANERFGGTGGVLSLHSDP 126 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +Y GI + + +++ F+ Sbjct: 127 AIELPYPVYGGIFRKEAIMLLRKFY 151 >gi|241667466|ref|ZP_04755044.1| zinc-binding protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876013|ref|ZP_05248723.1| zinc-binding domain-containing protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842034|gb|EET20448.1| zinc-binding domain-containing protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 153 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A E+A A E+P+GAV V +N+I+ + N+ L D TAHAEIL +R + L Sbjct: 11 FMQKAYEQALLAYKAGEVPIGAVLVKDNQIVVQDFNKTIMLNDPTAHAEILVLRQAAKEL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MC + AR+ L Y + + GI + + + +H+ Sbjct: 71 ENYRLVNTKLYVTLEPCIMCLGGLIQARVSELIYACDDTR-VGIFSREKLHRNKNINHNL 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + ++++DFFK RR Sbjct: 130 KVTSGVMTEECSKLLRDFFKLRR 152 >gi|262341257|ref|YP_003284112.1| cytidine/deoxycytidylate deaminase family protein [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272594|gb|ACY40502.1| cytidine/deoxycytidylate deaminase family protein [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 148 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 50/142 (35%), Positives = 76/142 (53%), Gaps = 5/142 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+EA A +NE+P+GA + +I++A N ++TAHAE+L I + L Sbjct: 1 MKIALKEAFIAFHKNEVPIGAAITYEDVVIAKAHNLTETFSNITAHAEMLVINLASNYLR 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + + + LYVTLEPC MCA A+ L++I R+ GA N G Y+ H + Sbjct: 61 NKYIKKCTLYVTLEPCIMCAGALFLSQIGRVVCGAPNNSIRGFS-----YSGIKLHPKTK 115 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 GI + + + +IQ FF +R Sbjct: 116 FVSGIMKNQCKALIQKFFFFKR 137 >gi|183985263|ref|YP_001853554.1| cytidine/deoxycytidylate deaminase [Mycobacterium marinum M] gi|183178589|gb|ACC43699.1| cytidine/deoxycytidylate deaminase [Mycobacterium marinum M] Length = 152 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80 ++P+GAV + + ++RA N EL D TAHAEILA+R R+L L L VT+ Sbjct: 22 DVPIGAVVISADGTELARAVNAREELGDPTAHAEILALRAAARVLGDGWRLEGATLAVTV 81 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ LAR+ RL +GA PK G + + +H P++ G+ Q Sbjct: 82 EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPQVRGGVLAQECAAP 141 Query: 141 IQDFFKERR 149 +++FF +R Sbjct: 142 LEEFFGRQR 150 >gi|81300665|ref|YP_400873.1| tRNA-adenosine deaminase [Synechococcus elongatus PCC 7942] gi|81169546|gb|ABB57886.1| tRNA-adenosine deaminase [Synechococcus elongatus PCC 7942] Length = 168 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ A E+A A EIP+GAV V +++ NR +D HAEI+AIR + Sbjct: 20 WMTIAYEQAVIAGTAGEIPIGAVIVHQGHLLATGQNRRERDRDPCGHAEIIAIRAAAARI 79 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI AR+ +L Y A +PK G I + HH Sbjct: 80 GDWRLSDCQLYVTLEPCPMCAGAIIQARLGQLIYAADDPKAGAIRSLLNLPDSPVSHHHL 139 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI + Q+++D+F++RR Sbjct: 140 SVLAGILAEPCGQLLRDWFQQRR 162 >gi|26987771|ref|NP_743196.1| cumB protein [Pseudomonas putida KT2440] gi|24982465|gb|AAN66660.1|AE016294_2 cumB protein [Pseudomonas putida KT2440] Length = 145 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/126 (42%), Positives = 74/126 (58%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V + ++I + NR D +AHAE++AIR R S LP LYVTLEPC Sbjct: 17 VPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRAAARSASNYRLPGSTLYVTLEPC 76 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 +MCA I +R+ R+ +GA PK G +++ QF+ +H + G+ Q QI+ D Sbjct: 77 SMCAGLIVHSRVMRVVFGALEPKAGIVQSQGQFFGQGFLNHRVMVEGGVLAQECGQILSD 136 Query: 144 FFKERR 149 FFK RR Sbjct: 137 FFKARR 142 >gi|302879427|ref|YP_003847991.1| CMP/dCMP deaminase zinc-binding [Gallionella capsiferriformans ES-2] gi|302582216|gb|ADL56227.1| CMP/dCMP deaminase zinc-binding [Gallionella capsiferriformans ES-2] Length = 240 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 52/128 (40%), Positives = 69/128 (53%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V + +II R N L D +AHAE+ A+R + L L +L+VTLE Sbjct: 96 GEVPVGAVVVKDGQIIGRGYNAPISLHDPSAHAEMQALRAAAQYLGNYRLVGCELFVTLE 155 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI ARIRRL YGAS+ K G + + +H E+ G+ + + Sbjct: 156 PCVMCAGAIMHARIRRLVYGASDFKTGVCGSLLDLFAEQRLNHHTEVAGGVLAEACGATL 215 Query: 142 QDFFKERR 149 FF RR Sbjct: 216 SRFFSLRR 223 >gi|89901064|ref|YP_523535.1| CMP/dCMP deaminase [Rhodoferax ferrireducens T118] gi|89345801|gb|ABD70004.1| CMP/dCMP deaminase, zinc-binding [Rhodoferax ferrireducens T118] Length = 363 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 52/142 (36%), Positives = 81/142 (57%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL +A AAL E+PVGAV + + +I+ N + E +D +AHAEI+A+R L Sbjct: 21 MQLALTQAGLAALAGEVPVGAVVLKDGVLIASGRNASIETQDPSAHAEIVALRAAALALG 80 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L +L+VTLEPC MC A+ AR++R+ YGA +PK G + + +H E Sbjct: 81 NYRLDGCELFVTLEPCAMCVGAMLHARLQRVVYGAPDPKTGAAGSVLDLFANPQLNHHTE 140 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ +++Q FF+++R Sbjct: 141 VQGGVLADACAELLQRFFQQKR 162 >gi|284928847|ref|YP_003421369.1| tRNA-adenosine deaminase [cyanobacterium UCYN-A] gi|284809306|gb|ADB95011.1| tRNA-adenosine deaminase [cyanobacterium UCYN-A] Length = 162 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL AQ A ++PVGAV V N +I++ N + D T HAEI+AIR + Sbjct: 11 WMKKALSLAQKAENLEDVPVGAVIVDNYGNLIAQGHNCKKRNNDPTGHAEIVAIRQASQK 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + LYVTLEPC MC AI +RI L YG +PK G I +H Sbjct: 71 LQSCYLEKCVLYVTLEPCIMCTGAIIHSRIGLLVYGIDDPKTGAIRTVLNLPDSNASNHR 130 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI +Q +Q +Q++FK+ R Sbjct: 131 LPVISGILKQDCQQHLQEWFKKIR 154 >gi|56752247|ref|YP_172948.1| putative cytidine and deoxycytidylate deaminase [Synechococcus elongatus PCC 6301] gi|56687206|dbj|BAD80428.1| putative cytidine and deoxycytidylate deaminase [Synechococcus elongatus PCC 6301] Length = 168 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ A E+A A EIP+GAV V +++ NR +D HAEI+AIR + Sbjct: 20 WMTIAYEQAVIAGTAGEIPIGAVIVHQGHLLATGQNRRERDRDPCGHAEIIAIRAAAARI 79 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI AR+ +L Y A +PK G I + HH Sbjct: 80 GDWRLSDCHLYVTLEPCPMCAGAIIQARLGQLIYAADDPKAGAIRSLLNLPDSPVSHHHL 139 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI + Q+++D+F++RR Sbjct: 140 SVLAGILAEPCGQLLRDWFQQRR 162 >gi|114562317|ref|YP_749830.1| CMP/dCMP deaminase, zinc-binding [Shewanella frigidimarina NCIMB 400] gi|114333610|gb|ABI70992.1| tRNA-adenosine deaminase [Shewanella frigidimarina NCIMB 400] Length = 189 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A++ A+ A L+ E+PVGAV V ++ +I+ N + D TAHAE+ IR ++L Sbjct: 35 WMRLAMQLAEQAELKGEVPVGAVLVKDDVLIASGCNLSIVNHDPTAHAEMECIRQAGKVL 94 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + + LYVTLEPCTMCA A+ +RI R+ YGA + K G + +H Sbjct: 95 ENYRMLDTTLYVTLEPCTMCAGAMVHSRITRVVYGADDLKTGAAGSVINLLQHPVFNHQL 154 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + FF+ RR Sbjct: 155 EVSSGVLAAECGAQLSAFFQRRR 177 >gi|304390572|ref|ZP_07372525.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326328|gb|EFL93573.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 180 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK--DVTAHAEILAIRMGCRI 65 + A AQ A +IPVGAV + I++ G RE D +AHAEI+A+R Sbjct: 37 LDTAYRLAQKAGRAGDIPVGAVVLTPEGIVAGLGLNQRENPPYDPSAHAEIVALREAAGR 96 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L L TLEPCTMCA AI ARI RL +GA +PK G + + +H Sbjct: 97 LERWNLKGCTLVATLEPCTMCAGAIVNARISRLIFGAWDPKAGACGSIRDVVRDSRLNHQ 156 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E R + +++ FF ERR Sbjct: 157 VEVKGGVDEPRIKALLKAFFGERR 180 >gi|256545480|ref|ZP_05472842.1| tRNA-specific adenosine deaminase [Anaerococcus vaginalis ATCC 51170] gi|256398876|gb|EEU12491.1| tRNA-specific adenosine deaminase [Anaerococcus vaginalis ATCC 51170] Length = 157 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 50/139 (35%), Positives = 80/139 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ EA+ A L +E+P+G V V + KII+R+ N + K HAEILAI + + Sbjct: 6 YMKEAINEAKLARLEDEVPIGCVIVKDEKIIARSHNYTYKGKSALKHAEILAIDKASKYV 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + +YVT+EPC+MCA AI +RI+RL G ++ K G + T + H Sbjct: 66 GDFRLEDCTMYVTMEPCSMCAGAIINSRIKRLVIGLADVKRGACGSNTNITGDRSQLHYL 125 Query: 127 EIYPGISEQRSRQIIQDFF 145 + G+ ++ S +++Q+FF Sbjct: 126 DAEFGLMKEESLELLQNFF 144 >gi|167586888|ref|ZP_02379276.1| CMP/dCMP deaminase, zinc-binding protein [Burkholderia ubonensis Bu] Length = 191 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/139 (38%), Positives = 74/139 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A A A E+PVGAV V +++I+R N D +AHAE+ A+RM + L Sbjct: 32 FMRLAQAAADEARAAGEVPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHL 91 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 +P +LYVTLEPC MCA AI ARI R+ YGA++PK G + + +H Sbjct: 92 QNYRMPGCELYVTLEPCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHT 151 Query: 127 EIYPGISEQRSRQIIQDFF 145 E+ G+ ++ FF Sbjct: 152 EVVGGVLADECGAALKSFF 170 >gi|315654318|ref|ZP_07907226.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii ATCC 51333] gi|315491353|gb|EFU80970.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii ATCC 51333] Length = 180 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/137 (40%), Positives = 74/137 (54%), Gaps = 2/137 (1%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK--DVTAHAEILAIRMGCRILSQEILP 72 AQ A +IPVGAV + I++ G RE D +AHAEI+A+R L + L Sbjct: 44 AQKAGRAGDIPVGAVVLTPEGIVAGLGLNQRENPPYDPSAHAEIVALREAAGRLERWNLK 103 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132 L TLEPCTMCA AI ARI RL +GA +PK G + + +H E+ G+ Sbjct: 104 GCTLVATLEPCTMCAGAIVNARISRLIFGAWDPKAGACGSIRDVVRDSRLNHQVEVKGGV 163 Query: 133 SEQRSRQIIQDFFKERR 149 E R + +++ FF ERR Sbjct: 164 DEPRVKALLKAFFGERR 180 >gi|118619510|ref|YP_907842.1| cytidine/deoxycytidylate deaminase [Mycobacterium ulcerans Agy99] gi|118571620|gb|ABL06371.1| cytidine/deoxycytidylate deaminase [Mycobacterium ulcerans Agy99] Length = 152 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80 ++P+GAV + + ++RA N EL D TAHAEILA+R R+L L L VT+ Sbjct: 22 DVPIGAVMISADGTELARAVNAREELGDPTAHAEILALRAAARVLGDGWRLEGATLAVTV 81 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ LAR+ RL +GA PK G + + +H P++ G+ Q Sbjct: 82 EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPQVRGGVLAQECAAP 141 Query: 141 IQDFFKERR 149 +++FF +R Sbjct: 142 LEEFFGRQR 150 >gi|54294609|ref|YP_127024.1| hypothetical protein lpl1685 [Legionella pneumophila str. Lens] gi|53754441|emb|CAH15925.1| hypothetical protein lpl1685 [Legionella pneumophila str. Lens] Length = 149 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 78/144 (54%), Gaps = 3/144 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A E+A A E+PVGAV V +N+++ N + D + HAEI AIR R Sbjct: 8 WMQLAYEQAVIARNEGEVPVGAVLVSKDNQLLGVGRNVIEKSHDPSDHAEIRAIRQASRK 67 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L+ L + LYVTLEPC MCA + ARI+RL + + K G G+ F L +HS Sbjct: 68 LNNHRLLDTTLYVTLEPCVMCAGLMVHARIKRLVFATRDFKAGA--AGSIFNVLHALNHS 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 I GI + Q++ DFF++ R Sbjct: 126 VLIDEGIMQAECSQLLSDFFRKLR 149 >gi|212695506|ref|ZP_03303634.1| hypothetical protein ANHYDRO_00023 [Anaerococcus hydrogenalis DSM 7454] gi|212677506|gb|EEB37113.1| hypothetical protein ANHYDRO_00023 [Anaerococcus hydrogenalis DSM 7454] Length = 180 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ EA+ A L E+P+G V V N KII+R+ N + K HAEILAI + + Sbjct: 26 YMREAINEAKLARLEEEVPIGCVIVKNGKIIARSHNYTYKGKSALKHAEILAIDKASKYV 85 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + +YVT+EPC+MCA AI +RI RL ++ K G + T + H Sbjct: 86 GDFRLEDCTMYVTMEPCSMCAGAIINSRIDRLVIALADVKRGACGSNTNITGDRSQLHFL 145 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + +S +I+Q FFK+ R Sbjct: 146 DAEFGLMKDQSLEILQSFFKKLR 168 >gi|255279741|ref|ZP_05344296.1| tRNA-specific adenosine deaminase [Bryantella formatexigens DSM 14469] gi|255269514|gb|EET62719.1| tRNA-specific adenosine deaminase [Bryantella formatexigens DSM 14469] Length = 166 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 47/143 (32%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ +A+ A +E+P+G V V + KII+R NR K+ +HAE++AI+ + Sbjct: 12 FMREAIRQAKKAYALDEVPIGCVIVQDGKIIARGYNRRNTDKNTLSHAELIAIKKAAKKT 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +Y+TLEPC MCA A+ AR+ G+ NPK G + + +H Sbjct: 72 GDWRLEGCTMYITLEPCQMCAGAMVQARLTEAVIGSMNPKAGCAGSILNILEMPEFNHQV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E+ +++ FF+E R Sbjct: 132 QVTRGVLEEECSELLSRFFRELR 154 >gi|294140156|ref|YP_003556134.1| cytidine/deoxycytidylate deaminase family protein [Shewanella violacea DSS12] gi|293326625|dbj|BAJ01356.1| cytidine/deoxycytidylate deaminase family protein [Shewanella violacea DSS12] Length = 169 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 73/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FMS A+E A A E+PVGAV V + ++IS N L D +AHAE+ +R ++ Sbjct: 7 FMSMAMEMAHKAEAVGEVPVGAVLVKHGQVISAGFNYCIGLHDPSAHAEMQCLRQAGKVT 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI RL +GA + K G +H Sbjct: 67 ENYRLLDTTLYVTLEPCAMCAGAMVHSRIARLVFGAKDEKTGAAGTVIDLVRHPDFNHQL 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + + FF+ RR Sbjct: 127 QVSDGVLADECSEQLSQFFRRRR 149 >gi|111021134|ref|YP_704106.1| tRNA-specific adenosine deaminase [Rhodococcus jostii RHA1] gi|110820664|gb|ABG95948.1| probable tRNA-specific adenosine deaminase [Rhodococcus jostii RHA1] Length = 123 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 48/114 (42%), Positives = 64/114 (56%), Gaps = 1/114 (0%) Query: 37 ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTLEPCTMCAAAISLARI 95 +SRA N + D TAHAEI+A+R R+ L L VTLEPCTMCA A+ LARI Sbjct: 10 VSRAVNSREAMSDPTAHAEIIALRAAARVYGDGWRLEGATLAVTLEPCTMCAGALVLARI 69 Query: 96 RRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 R+ +GA PK G + + H P++ G+ E I++DFF+ERR Sbjct: 70 SRVVFGAWEPKTGAVGSLWDVVRDRRLTHRPQVRGGVLEDECAGILEDFFRERR 123 >gi|325479006|gb|EGC82107.1| cytidine and deoxycytidylate deaminase zinc-binding region [Anaerococcus prevotii ACS-065-V-Col13] Length = 169 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 74/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA+ A E+PVGAV V +II R N + K HAEI+AI+ + Sbjct: 19 FMQEAISEARLARFVEEVPVGAVIVYKGEIIGRGHNYTYKGKSALKHAEIMAIKEASEYM 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E +YVT+EPC+MCA AI +RI RL G +PK G + T + H Sbjct: 79 DDFRLEECTMYVTMEPCSMCAGAIINSRIDRLVIGIRDPKRGACGSNTNVTGDRSQLHYL 138 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+SE+ IQ FF+ R Sbjct: 139 DAEFGLSEEECLYEIQTFFRYLR 161 >gi|92112967|ref|YP_572895.1| tRNA-adenosine deaminase [Chromohalobacter salexigens DSM 3043] gi|91796057|gb|ABE58196.1| tRNA-adenosine deaminase [Chromohalobacter salexigens DSM 3043] Length = 151 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 M+ +M AL++A A E+PVGAV V + I+ N D +AHAE+ A+ Sbjct: 1 MRSDTFYMHRALDQAHRALEAGEVPVGAVVVARDGDIVGTGFNAPVSSHDPSAHAEVRAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R L L L+VTLEPC MC AI AR+ R+ Y A+ P+ G +E+ + Sbjct: 61 RDAAERLGNYRLEGCTLFVTLEPCLMCTGAIIHARVARVVYAAAEPRSGMVESRANLFAQ 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ R+ +++ FF RR Sbjct: 121 PWFNHRVEVEGGVLASRATHLLKAFFAARR 150 >gi|226355797|ref|YP_002785537.1| tRNA(Ile)-lysidine synthetase [Deinococcus deserti VCD115] gi|259533711|sp|C1D1Q9|TILS_DEIDV RecName: Full=tRNA(Ile)-lysidine synthase; AltName: Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName: Full=tRNA(Ile)-lysidine synthetase gi|226317787|gb|ACO45783.1| putative tRNA(Ile)-lysidine synthetase [Deinococcus deserti VCD115] Length = 533 Score = 91.3 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 56/143 (39%), Positives = 76/143 (53%), Gaps = 2/143 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A+ AAL E+PVGAV + +II N +R D+T HAE+ A+R L Sbjct: 383 MGEALGLAREAALAQEVPVGAVVLGPGGRIIGSGRNTSRADSDMTRHAELAALRAATAEL 442 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPC MC A AR+ R+ YGASNPK G + G + H P Sbjct: 443 GTAYLTGCTLVVTLEPCPMCLGAALEARVERIVYGASNPKAGAL-GGVSDLLSSHWGHVP 501 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ Q + ++++D F+E R Sbjct: 502 AVTGGVRAQDAARVLRDSFQELR 524 >gi|257438151|ref|ZP_05613906.1| tRNA-specific adenosine deaminase [Faecalibacterium prausnitzii A2-165] gi|257199482|gb|EEU97766.1| tRNA-specific adenosine deaminase [Faecalibacterium prausnitzii A2-165] Length = 162 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 1/122 (0%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV N +II+ A N K+ HAE+LAI C+ L L + +L+VTLEPC Sbjct: 23 VPVGAVVARNGEIIAAAHNTRETEKNALHHAELLAIDAACKKLGGWRLWQCELFVTLEPC 82 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MC+ I +RIRR+ YGA++ K G + T + L HH P + G+ + ++ ++Q Sbjct: 83 PMCSGGIINSRIRRVVYGAADTKAGCCGSVTDLFALPFNHH-PVVERGLRAEEAQALLQA 141 Query: 144 FF 145 FF Sbjct: 142 FF 143 >gi|298345726|ref|YP_003718413.1| nucleoside deaminase [Mobiluncus curtisii ATCC 43063] gi|298235787|gb|ADI66919.1| nucleoside deaminase [Mobiluncus curtisii ATCC 43063] Length = 180 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK--DVTAHAEILAIRMGCRI 65 + A AQ A +IPVGAV + I++ G RE D +AHAEI+A+R Sbjct: 37 LDTAYGLAQKAGRAGDIPVGAVVLTPEGIVAGLGLNQRENPPYDPSAHAEIVALREAAGR 96 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L L TLEPCTMCA AI ARI RL +GA +PK G + + +H Sbjct: 97 LERWNLKGCTLVATLEPCTMCAGAIVNARISRLIFGAWDPKAGACGSIRDVVRDSRLNHQ 156 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E R + +++ FF ERR Sbjct: 157 VEVKGGVDEPRIKALLKAFFGERR 180 >gi|153877830|ref|ZP_02004382.1| cytosine/adenosine deaminase [Beggiatoa sp. PS] gi|152065706|gb|EDN65618.1| cytosine/adenosine deaminase [Beggiatoa sp. PS] Length = 156 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 79/144 (54%), Gaps = 4/144 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ AA + EIPVGAV + I+ N++ D TAHAEI+A+R L Sbjct: 12 WMRHALHLAERAAKQGEIPVGAVIIHGESCIAEGWNQSILAHDPTAHAEIVALRKAAHYL 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI AR++R+ +GA + K G G++F L H+ Sbjct: 72 KNYRLIDTTLYVTLEPCVMCAGAILQARVKRVVFGAYDEKAGAA--GSRFDILRDTRHNH 129 Query: 127 EI--YPGISEQRSRQIIQDFFKER 148 ++ + + + DFF+++ Sbjct: 130 QVECVSQVLAEECGACLTDFFRQK 153 >gi|148546319|ref|YP_001266421.1| CMP/dCMP deaminase, zinc-binding [Pseudomonas putida F1] gi|148510377|gb|ABQ77237.1| tRNA-adenosine deaminase [Pseudomonas putida F1] gi|313497401|gb|ADR58767.1| CMP/dCMP deaminase zinc-binding protein [Pseudomonas putida BIRD-1] Length = 159 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 53/126 (42%), Positives = 74/126 (58%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V + ++I + NR D +AHAE++AIR R S LP LYVTLEPC Sbjct: 31 VPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRAAARSASNYRLPGSTLYVTLEPC 90 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 +MCA I +R+ R+ +GA PK G +++ QF+ +H + G+ Q QI+ D Sbjct: 91 SMCAGLIVHSRVMRVVFGALEPKAGIVQSQGQFFGQGFLNHRVMVEGGVLAQECGQILSD 150 Query: 144 FFKERR 149 FFK RR Sbjct: 151 FFKARR 156 >gi|33519984|ref|NP_878816.1| putative cytosine/adenosine deaminase [Candidatus Blochmannia floridanus] gi|33504330|emb|CAD83223.1| cytosine/adenosine deaminase zinc-binding region; hydrolase activity [Candidatus Blochmannia floridanus] Length = 159 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 55/150 (36%), Positives = 80/150 (53%), Gaps = 13/150 (8%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++M A+ A A L ++ VGAV V N ++I N + + D +AHAEI+A+R+G + Sbjct: 9 IWMCYAVMLANIADLNGDVSVGAVLVYNERLIGCGYNASIKNNDPSAHAEIVALRIGAEV 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT---- 121 L L LYVTLEPC MC A+ AR+ +L YGA N K T+++++ Sbjct: 69 LGNYRLLNTTLYVTLEPCMMCIGAMIHARVYKLVYGAHNKK-------TEYFSIWNKYIR 121 Query: 122 --CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C+H I G+ E+ I FFK RR Sbjct: 122 NDCNHRFVIKSGVLEKICSDQISSFFKIRR 151 >gi|256831602|ref|YP_003160329.1| CMP/dCMP deaminase zinc-binding [Jonesia denitrificans DSM 20603] gi|256685133|gb|ACV08026.1| CMP/dCMP deaminase zinc-binding [Jonesia denitrificans DSM 20603] Length = 154 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 60/147 (40%), Positives = 77/147 (52%), Gaps = 6/147 (4%) Query: 8 MSCALEEAQNAALR----NEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMG 62 M AL EA+ A LR ++P+GAV + + A + REL +D TAHAEILAIR Sbjct: 1 MDDALTEARRA-LRLHGPPDVPIGAVIIDAHGHTIAAAHNERELTQDPTAHAEILAIRKA 59 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L + L VTLEPC MCA AI LARI R+ GA +PK G + Sbjct: 60 ATHLGTWRLDQCTLVVTLEPCAMCAGAIVLARIPRIVIGAWDPKAGATGSVFDIVRAPQL 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ PGI S ++ +FF R Sbjct: 120 NHFVEVIPGIRAADSATLLTEFFATHR 146 >gi|163856878|ref|YP_001631176.1| putative zinc-binding hydrolase [Bordetella petrii DSM 12804] gi|163260606|emb|CAP42908.1| putative zinc-binding hydrolase [Bordetella petrii] Length = 164 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 70/129 (54%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV V +++ NR D TAHAEI+A+R R L LP V LYVTL Sbjct: 30 GEVPVGAVVVDAQGQVLGAGYNRTITDSDPTAHAEIVALRAAARRLGNYRLPGVSLYVTL 89 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MC A+ AR+ R+ YGA++PK G + + +H I G+ + + Sbjct: 90 EPCVMCIGAMLHARLARVVYGAADPKTGACGSVLDVGAVVRLNHQTTITGGVLAEPCGNL 149 Query: 141 IQDFFKERR 149 ++ FF+ RR Sbjct: 150 LRQFFRARR 158 >gi|119961460|ref|YP_946593.1| cytidine/deoxycytidylate deaminase [Arthrobacter aurescens TC1] gi|119948319|gb|ABM07230.1| putative cytidine/deoxycytidylate deaminase [Arthrobacter aurescens TC1] Length = 177 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 59/157 (37%), Positives = 83/157 (52%), Gaps = 16/157 (10%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRI 65 +M AL+EA+ A +++P+GAV + + + +G RE D TAHAEI+AIR Sbjct: 14 WMGLALDEARLALKTDDVPIGAVVLGPDGGVLGSGRNEREAHGDPTAHAEIVAIREAAAA 73 Query: 66 LSQEI-----------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 L Q L + L VTLEPC MCA AI LARI R+ +GA + K G + G+ Sbjct: 74 LRQLAHDSGASGDGWRLEDCTLVVTLEPCAMCAGAIVLARIPRVVFGAWDEKAGAV--GS 131 Query: 115 QFYTLAT--CHHSPEIYPGISEQRSRQIIQDFFKERR 149 F L +H E+Y G+ E +++DFF R Sbjct: 132 VFDILRERRLNHWVEVYAGVREDECAALLRDFFATHR 168 >gi|312891108|ref|ZP_07750631.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM 18603] gi|311296416|gb|EFQ73562.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM 18603] Length = 159 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 51/146 (34%), Positives = 79/146 (54%), Gaps = 7/146 (4%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL+EA+ A +EIP+GA+ V +II R N L DV+AHAE+ A+ Sbjct: 17 DFFMKEALKEARLALAEDEIPIGALVVCKGQIIGRGHNLTERLNDVSAHAEMQALTAATN 76 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-GGGIENGTQFYTLATCH 123 + LP+ LYVT+EPC MCA A ++ ++ +GA + + G G N H Sbjct: 77 YTGGKYLPDCTLYVTMEPCVMCAGASYWFQVGKIVFGAYDTRLGFGRLNQ------KITH 130 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 I GI E +++++FF+++R Sbjct: 131 PKTLITGGIMENECSELVREFFRKKR 156 >gi|120611742|ref|YP_971420.1| CMP/dCMP deaminase [Acidovorax citrulli AAC00-1] gi|120590206|gb|ABM33646.1| CMP/dCMP deaminase, zinc-binding protein [Acidovorax citrulli AAC00-1] Length = 484 Score = 90.9 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 54/140 (38%), Positives = 75/140 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+EA AA R EIPVGAV V + ++++R N D TAHAEI+A+R L Sbjct: 22 WMRIALQEAAEAAARGEIPVGAVVVRDGELVARGSNAPIAGHDPTAHAEIVALRAAAGRL 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MC+ A+ AR+ R+ YGA + K G + + +H Sbjct: 82 GNYRLDGCTLYVTLEPCAMCSGAMLHARLDRVVYGAPDAKTGAAGSVVDLFAQPALNHHT 141 Query: 127 EIYPGISEQRSRQIIQDFFK 146 I G+ Q ++ FF+ Sbjct: 142 RIEGGVLAQECGALLSGFFQ 161 >gi|269129124|ref|YP_003302494.1| CMP/dCMP deaminase zinc-binding protein [Thermomonospora curvata DSM 43183] gi|268314082|gb|ACZ00457.1| CMP/dCMP deaminase zinc-binding protein [Thermomonospora curvata DSM 43183] Length = 168 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 78/144 (54%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL++A+ A ++PVGAV +L++ ++I+ N + D TAHAE++A+R Sbjct: 24 MRLALDQARLAMESGDVPVGAV-ILDSGGRVIATGRNEREQTADPTAHAEVVALRSAAAR 82 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L L VTLEPCTMCA A LAR+ R+ YGA +PK G + + +H Sbjct: 83 LGSWRLEGCTLVVTLEPCTMCAGAAVLARVDRIVYGAVDPKAGAVGSLWDVVRDRRLNHR 142 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+ + ++ +FF RR Sbjct: 143 PEVIAEVLADECGAVLTEFFARRR 166 >gi|161524475|ref|YP_001579487.1| CMP/dCMP deaminase zinc-binding [Burkholderia multivorans ATCC 17616] gi|221215505|ref|ZP_03588469.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD1] gi|160341904|gb|ABX14990.1| CMP/dCMP deaminase zinc-binding [Burkholderia multivorans ATCC 17616] gi|221164689|gb|EED97171.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD1] Length = 187 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 53/141 (37%), Positives = 77/141 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL A+ A E+PVGAV V +++++R N D +AHAE+ A+RM + L Sbjct: 28 FMRLALAAAEEARAAGEVPVGAVLVRGDEVLARGFNHPIGGHDPSAHAEMAALRMAAQHL 87 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 +P +LYVTLEPC MCA AI ARI R+ +GA++PK G + + +H Sbjct: 88 QNYRMPGCELYVTLEPCLMCAGAIMHARIARVVFGAADPKTGVCGSVMDAFANPQLNHHT 147 Query: 127 EIYPGISEQRSRQIIQDFFKE 147 E+ G+ ++ FF E Sbjct: 148 EVVGGVLAHECGAALKSFFAE 168 >gi|325981113|ref|YP_004293515.1| CMP/dCMP deaminase zinc-binding protein [Nitrosomonas sp. AL212] gi|325530632|gb|ADZ25353.1| CMP/dCMP deaminase zinc-binding protein [Nitrosomonas sp. AL212] Length = 152 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 55/142 (38%), Positives = 75/142 (52%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALE A A E+PVGAV V + I+ R NR D +AHAEI+A+R ++ Sbjct: 1 MQAALELALQAQECGEVPVGAVVVQHGVIVGRGYNRPISTADPSAHAEIMAMRDAGGHMA 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MC AI ARI+RL Y A++PK G + +H Sbjct: 61 NYRLLDCVLYVTLEPCVMCIGAIFHARIQRLVYAAADPKTGACGSVLDLPAETRLNHHLL 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + GI + +++ FF +RR Sbjct: 121 VDAGIMAPEAGTLLRQFFAQRR 142 >gi|91792629|ref|YP_562280.1| CMP/dCMP deaminase, zinc-binding [Shewanella denitrificans OS217] gi|91714631|gb|ABE54557.1| CMP/dCMP deaminase, zinc-binding [Shewanella denitrificans OS217] Length = 177 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 52/147 (35%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K +M A+ A+ A + E+PVGAV V +N++++ N + D +AHAE+ IR Sbjct: 20 KDEHWMRVAMSMAEEAEAKGEVPVGAVLVKDNQLLATGFNLSISEHDCSAHAEMACIRAA 79 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ L + LYVTLEPC MCA A+ ARI RL +GA++ K G + Sbjct: 80 GTLIENYRLLDTTLYVTLEPCPMCAGAMVHARIARLVFGATDLKTGAAGSVMNLLQHPGL 139 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + + FFK RR Sbjct: 140 NHQLEITSGVLAEPCAAQLSAFFKRRR 166 >gi|4580029|gb|AAD24212.1|AF086638_2 CumB [Pseudomonas putida GB-1] Length = 145 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 51/126 (40%), Positives = 74/126 (58%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V + ++I + NR D +AHAE++AIR + S LP LYVTLEPC Sbjct: 17 VPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRAAAKAASNYRLPGSTLYVTLEPC 76 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 +MCA I +R+ R+ +GA PK G +++ QF+ +H + G+ + QI+ D Sbjct: 77 SMCAGLIVHSRVMRVVFGALEPKAGIVQSQGQFFGQGFLNHRVIVEGGVLAEACGQILSD 136 Query: 144 FFKERR 149 FFK RR Sbjct: 137 FFKARR 142 >gi|187735588|ref|YP_001877700.1| CMP/dCMP deaminase zinc-binding [Akkermansia muciniphila ATCC BAA-835] gi|187425640|gb|ACD04919.1| CMP/dCMP deaminase zinc-binding [Akkermansia muciniphila ATCC BAA-835] Length = 181 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 50/144 (34%), Positives = 75/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++E++ A ++ E+PVGA+ V + ++I R N+ LKD TAHAE++A+ L Sbjct: 16 FMRQAMKESRKALVKGEVPVGAIVVKDGRVIGRGWNQVETLKDATAHAEMIALTAAQEAL 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY-TLATCHHS 125 L LYVT EPC MCA AI R R+ +G + K G + +H Sbjct: 76 GDWRLEGCTLYVTKEPCPMCAGAIVHCRPDRVVFGCPDAKTGAAGGWINLLDSNPPLNHK 135 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ PG+ +Q+FF+ R Sbjct: 136 CEVRPGVLGDECLLHLQEFFRAAR 159 >gi|289208495|ref|YP_003460561.1| CMP/dCMP deaminase zinc-binding protein [Thioalkalivibrio sp. K90mix] gi|288944126|gb|ADC71825.1| CMP/dCMP deaminase zinc-binding protein [Thioalkalivibrio sp. K90mix] Length = 175 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 78/144 (54%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL +A+ AA E+PVGAV V ++ A N D TAHAEI +R + Sbjct: 30 WMDVALAQAERAAEVGEVPVGAVLVDAEGYCLAVAHNAPIGEHDATAHAEIRVLRRAGKR 89 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 S L LYVTLEPC+MCA A+ AR+ RL + AS+P+ G +H Sbjct: 90 CSNYRLTGTTLYVTLEPCSMCAGAMIHARVERLVFAASDPRTGAAGGAIDLLHHPAHNHR 149 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E G++ +RS +++++FF+ RR Sbjct: 150 LECIEGVAAKRSAELLRNFFRLRR 173 >gi|327403312|ref|YP_004344150.1| CMP/dCMP deaminase zinc-binding protein [Fluviicola taffensis DSM 16823] gi|327318820|gb|AEA43312.1| CMP/dCMP deaminase zinc-binding protein [Fluviicola taffensis DSM 16823] Length = 148 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 80/143 (55%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A EAQ A E+PVGAV V+NN+II+RA N L DVTAHAE+ AI L Sbjct: 10 FMRQAYMEAQKAFELGEVPVGAVVVVNNQIIARAHNLTERLHDVTAHAEMQAITAASEYL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC MCA A+ +++ ++ + + + K G + Y H Sbjct: 70 GAKYLKDCTLYVTLEPCVMCAGALYWSQLNKIIFASRDEKRGAGRFQNELY-----HPKT 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G EQ Q++ DFFKE+R Sbjct: 125 VVSKGPMEQECAQLMIDFFKEKR 147 >gi|120554632|ref|YP_958983.1| CMP/dCMP deaminase, zinc-binding [Marinobacter aquaeolei VT8] gi|120324481|gb|ABM18796.1| tRNA-adenosine deaminase [Marinobacter aquaeolei VT8] Length = 167 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 73/144 (50%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +M+ AL A+ AA E+PVGA+ V + K + N D TAHAEI A+R Sbjct: 6 KNDQYWMARALMLAERAASIGEVPVGAIVVRDGKELGVGYNAPITGCDPTAHAEIRALRD 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LYVTLEPCTMC AI +RI RL YGA PK G +E+ + A Sbjct: 66 ASARVGNYRLTGATLYVTLEPCTMCVGAIVHSRISRLVYGAREPKAGAVESARRTLDEAH 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 + E + E Q+I DFF Sbjct: 126 LNWQVEAEGSVLEGECGQVISDFF 149 >gi|253577340|ref|ZP_04854657.1| CMP/dCMP deaminase, zinc-binding [Paenibacillus sp. oral taxon 786 str. D14] gi|251843240|gb|EES71271.1| CMP/dCMP deaminase, zinc-binding [Paenibacillus sp. oral taxon 786 str. D14] Length = 165 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 74/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ A+ EA+ A E+P+GAV V ++I+ R N D TAHAE++AIR L Sbjct: 21 WMAEAIREARKAEAIGEVPIGAVIVRGDEIVGRGHNLRESSLDGTAHAEMIAIREASERL 80 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA AI R+ + YGA +PK G +H Sbjct: 81 GAWRLLHCRLYVTLEPCPMCAGAIVQCRVPHVIYGAPDPKAGCAGTLMNLLQEPRFNHRT 140 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I GI ++ ++ +FF+ R Sbjct: 141 DITSGILQEECASLLTEFFRRLR 163 >gi|167032047|ref|YP_001667278.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida GB-1] gi|166858535|gb|ABY96942.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida GB-1] Length = 159 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 51/126 (40%), Positives = 74/126 (58%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V + ++I + NR D +AHAE++AIR + S LP LYVTLEPC Sbjct: 31 VPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRAAAKAASNYRLPGSTLYVTLEPC 90 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 +MCA I +R+ R+ +GA PK G +++ QF+ +H + G+ + QI+ D Sbjct: 91 SMCAGLIVHSRVMRVVFGALEPKAGIVQSQGQFFGQGFLNHRVIVEGGVLAEACGQILSD 150 Query: 144 FFKERR 149 FFK RR Sbjct: 151 FFKARR 156 >gi|114320177|ref|YP_741860.1| tRNA-adenosine deaminase [Alkalilimnicola ehrlichii MLHE-1] gi|114226571|gb|ABI56370.1| tRNA-adenosine deaminase [Alkalilimnicola ehrlichii MLHE-1] Length = 164 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 71/126 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A A E+PVGAV VL+++ ++ N+ +D TAHAE++A+R +L Sbjct: 18 WMRRALALADQAEAAGEVPVGAVLVLDDREVAVGSNQPITARDPTAHAEVVALRRAGEVL 77 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMC AI AR++R+ + AS+PK G + +H P Sbjct: 78 GAYRLSGTTLYVTLEPCTMCIGAIIHARVKRVVFAASDPKTGACGSVFALADAPEHNHHP 137 Query: 127 EIYPGI 132 E+ G+ Sbjct: 138 EVVGGL 143 >gi|239623044|ref|ZP_04666075.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239522411|gb|EEQ62277.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 202 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 76/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ +A AA ++P+G V V +II+R NR K V +HAEI++I+ C+ L Sbjct: 57 FMGEAIRQAHKAAALGDVPIGCVIVRQGQIIARGYNRRNADKSVLSHAEIISIKRACKKL 116 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + +YVTLEPC MC+ AI ARI R+ G N K G + +H Sbjct: 117 GDWRLEDCTMYVTLEPCPMCSGAIVQARIPRVVIGCMNAKAGCAGSVLDLLHEPGFNHQV 176 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + ++++FF++ R Sbjct: 177 DTRAGVLGEECSGMMKEFFRKIR 199 >gi|304413544|ref|ZP_07395017.1| CMP/dCMP deaminase [Candidatus Regiella insecticola LSR1] gi|304284387|gb|EFL92780.1| CMP/dCMP deaminase [Candidatus Regiella insecticola LSR1] Length = 181 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 51/124 (41%), Positives = 67/124 (54%), Gaps = 1/124 (0%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV VL NKII N+ D +AHAEI+A+R + LP+ LYVTLEP Sbjct: 47 EVPVGAVLVLQNKIIGEGWNQPIIHHDPSAHAEIMALRQAGQQQKNYRLPDATLYVTLEP 106 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCA A+ +RI RL YGA++ K G + +H EI G+ Q++ Sbjct: 107 CVMCAGAMIHSRISRLVYGANDNKIGAV-GALTLLNHPAMNHQVEITAGVLVDACSQMLS 165 Query: 143 DFFK 146 FF Sbjct: 166 TFFS 169 >gi|326317008|ref|YP_004234680.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373844|gb|ADX46113.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 484 Score = 90.5 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 54/140 (38%), Positives = 74/140 (52%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+EA AA R EIPVGAV V ++++R N D TAHAEI+A+R L Sbjct: 22 WMRVALQEAAEAAARGEIPVGAVVVRGGELVARGSNAPIAGHDPTAHAEIVALRAAAGRL 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MC+ A+ AR+ R+ YGA + K G + + +H Sbjct: 82 GNYRLDGCTLYVTLEPCAMCSGAMLHARLDRVVYGAPDAKTGAAGSVVDLFAQPALNHHT 141 Query: 127 EIYPGISEQRSRQIIQDFFK 146 I G+ Q ++ FF+ Sbjct: 142 RIEGGVLAQECGALLSGFFQ 161 >gi|312126379|ref|YP_003991253.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor hydrothermalis 108] gi|311776398|gb|ADQ05884.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor hydrothermalis 108] Length = 171 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 74/132 (56%), Gaps = 3/132 (2%) Query: 18 AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLY 77 A+ N+IPV A V N KIIS N + K HAEILAI LS + L +++ Sbjct: 42 ASRSNDIPVAAAVVKNGKIISIKRNDS---KKAIYHAEILAIIDATSKLSTKDLRSCEMF 98 Query: 78 VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 VT EPC MC +AI L++++RLY+GA + K G E+ +H E+ GI E Sbjct: 99 VTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQNPFLNHKVEVIGGICEDEC 158 Query: 138 RQIIQDFFKERR 149 R +++ FF+E+R Sbjct: 159 RLLLKRFFEEKR 170 >gi|189350770|ref|YP_001946398.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia multivorans ATCC 17616] gi|189334792|dbj|BAG43862.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia multivorans ATCC 17616] Length = 159 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 70/126 (55%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++++R N D +AHAE+ A+RM + L +P +LYVTLE Sbjct: 15 GEVPVGAVLVRGDEVLARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLE 74 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI ARI R+ +GA++PK G + + +H E+ G+ + Sbjct: 75 PCLMCAGAIMHARIARVVFGAADPKTGVCGSVMDAFANPQLNHHTEVVGGVLAHECGAAL 134 Query: 142 QDFFKE 147 + FF E Sbjct: 135 KSFFAE 140 >gi|302530974|ref|ZP_07283316.1| cytidine and deoxycytidylate deaminase [Streptomyces sp. AA4] gi|302439869|gb|EFL11685.1| cytidine and deoxycytidylate deaminase [Streptomyces sp. AA4] Length = 155 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 72/129 (55%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80 ++P+GAV + + ++ A N EL D TAHAEILA+R R L L VTL Sbjct: 23 DVPIGAVVFDPDGRPLAAARNARVELADPTAHAEILALRAAAREFGDGWRLEGCTLAVTL 82 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ LAR+ RL +GA PK G + + +H PE++ G+ E + Sbjct: 83 EPCTMCAGALVLARVARLVFGAWEPKTGAVSSLWDVVRDRRLNHRPEVHGGVLESDCAAL 142 Query: 141 IQDFFKERR 149 ++ +F +RR Sbjct: 143 LEAYFADRR 151 >gi|221198274|ref|ZP_03571320.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD2M] gi|221208213|ref|ZP_03581217.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD2] gi|221171861|gb|EEE04304.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD2] gi|221182206|gb|EEE14607.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD2M] Length = 187 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 53/141 (37%), Positives = 77/141 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL A+ A E+PVGAV V +++++R N D +AHAE+ A+RM + L Sbjct: 28 FMRLALAAAEEARAAGEVPVGAVLVRGDEVLARGFNHPIGGHDPSAHAEMAALRMAAQHL 87 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 +P +LYVTLEPC MCA AI ARI R+ +GA++PK G + + +H Sbjct: 88 QNYRMPGCELYVTLEPCLMCAGAIMHARIARVVFGAADPKTGVCGSVMDAFANPQLNHHT 147 Query: 127 EIYPGISEQRSRQIIQDFFKE 147 E+ G+ ++ FF E Sbjct: 148 EVVGGVLANECGAALKSFFAE 168 >gi|167626885|ref|YP_001677385.1| zinc-binding protein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596886|gb|ABZ86884.1| zinc-binding protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 142 Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 50/142 (35%), Positives = 79/142 (55%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A E+A A E+P+GAV V +N+I+++ N+ L D TAHAEIL +R + L Sbjct: 1 MQKAYEQALLAYKAGEVPIGAVLVKDNQIVAQDFNKTIMLNDPTAHAEILVLRQAAKELE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L LYVTLEPC MC + AR+ L Y + + GI + + + + +H+ + Sbjct: 61 NYRLVNTKLYVTLEPCIMCLGGLIQARVSELVYACDDTR-VGIFSREKLHQSKSINHNLK 119 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ + ++++DFFK RR Sbjct: 120 VTSGVMIEECSKLLRDFFKLRR 141 >gi|325191113|emb|CCA25599.1| SUMO ligase putative [Albugo laibachii Nc14] Length = 182 Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 81/143 (56%), Gaps = 9/143 (6%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS--- 67 ALEEA+ A +R E+PVG VAV N+IIS A NR EL + T HAE++AI I+S Sbjct: 4 ALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY---IVSNYN 60 Query: 68 --QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-LATCHH 124 + I E YVT EPC MCAAA+ ++ R+ +G N + GG + + A Sbjct: 61 NTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEPTANIPR 120 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 + +PGI + +++Q F+++ Sbjct: 121 TFSCHPGILRIEAIELLQRFYEQ 143 >gi|115352007|ref|YP_773846.1| CMP/dCMP deaminase [Burkholderia ambifaria AMMD] gi|115281995|gb|ABI87512.1| tRNA-adenosine deaminase [Burkholderia ambifaria AMMD] Length = 193 Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 47/122 (38%), Positives = 68/122 (55%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I+R N D +AHAE+ A+RM + L +P +LYVTLEPC Sbjct: 51 VPVGAVLVCGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLEPC 110 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARI R+ YGA++PK G + + +H E+ G+ ++ Sbjct: 111 LMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAALKS 170 Query: 144 FF 145 FF Sbjct: 171 FF 172 >gi|229492640|ref|ZP_04386443.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis SK121] gi|229320626|gb|EEN86444.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis SK121] Length = 153 Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 2/137 (1%) Query: 15 AQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LP 72 A +A ++PVGAV + + ++RA N D TAHAEILA+R + L Sbjct: 16 AARSASDADVPVGAVVFDADGVEVARASNAREASSDPTAHAEILALRAAAKTYGDGWRLE 75 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132 L VTLEPCTMCA A+ LAR+ R+ +GA PK G + + + P++ G+ Sbjct: 76 GATLAVTLEPCTMCAGALVLARVSRVVFGAWEPKTGAVGSLWDVVRDKRLTYRPQVRGGV 135 Query: 133 SEQRSRQIIQDFFKERR 149 E +++DFF+E+R Sbjct: 136 LEDECAGLLEDFFREQR 152 >gi|326470308|gb|EGD94317.1| tRNA-specific adenosine deaminase subunit Tad2p/ADAT2 [Trichophyton tonsurans CBS 112818] gi|326481147|gb|EGE05157.1| cytidine and deoxycytidylate deaminase [Trichophyton equinum CBS 127.97] Length = 189 Score = 90.1 bits (222), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 49/145 (33%), Positives = 75/145 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + K VFM AL+ A+ A E PVG V V +++I N + + T HAE LAI Sbjct: 7 LSKHEVFMKMALKMAETALAVGETPVGCVLVNKDRVIGSGMNDTNKSLNGTRHAEFLAIE 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + I E DLYVT+EPC MCA+A+ +IR +Y+G +N + GG ++ Sbjct: 67 EALRSYPRSIFRETDLYVTVEPCIMCASALRQYQIRSVYFGCANERFGGTGGVLTLHSDP 126 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +Y GI + + +++ F+ Sbjct: 127 AIDQPYPVYGGIYRKEAIMLLRKFY 151 >gi|307328842|ref|ZP_07608012.1| CMP/dCMP deaminase zinc-binding [Streptomyces violaceusniger Tu 4113] gi|306885507|gb|EFN16523.1| CMP/dCMP deaminase zinc-binding [Streptomyces violaceusniger Tu 4113] Length = 166 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 53/141 (37%), Positives = 73/141 (51%), Gaps = 1/141 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALEEA A ++PVGAV + + ++ R N D TAHAE+LA+R L Sbjct: 25 MRLALEEAVRAPETGDVPVGAVVLGPDGSVLGRGRNEREAHGDPTAHAEVLALRAAAHHL 84 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA AI L+R+ RL YGA + K G + + +H P Sbjct: 85 GGWRLTGCTLVVTLEPCTMCAGAIVLSRLNRLVYGAVDEKAGAVGSLWDVVRDRRLNHRP 144 Query: 127 EIYPGISEQRSRQIIQDFFKE 147 E+ G+ + + FF++ Sbjct: 145 EVIAGVLAEACAAPLTAFFRK 165 >gi|52841949|ref|YP_095748.1| deaminase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629060|gb|AAU27801.1| deaminase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 141 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 76/143 (53%), Gaps = 3/143 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A E+A A E+PVGAV V +N+++ N + D + HAEI AIR R L Sbjct: 1 MQLAYEQAVIARNEGEVPVGAVLVSKDNQLLGVGRNVIEKSHDPSDHAEIRAIRQASRKL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC MCA + ARI+RL + + K G G+ F L +HS Sbjct: 61 NNHRLLDTTLYVTLEPCVMCAGLMVHARIKRLVFATRDFKTGAA--GSMFNVLHALNHSV 118 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI + Q++ DFF+ R Sbjct: 119 LIDEGIMQAECSQLLSDFFRNLR 141 >gi|315503317|ref|YP_004082204.1| cmp/dcmp deaminase zinc-binding protein [Micromonospora sp. L5] gi|315409936|gb|ADU08053.1| CMP/dCMP deaminase zinc-binding protein [Micromonospora sp. L5] Length = 208 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 1/124 (0%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 +PVGAV + G REL D TAHAE+LA+R + L + L + L VTLEP Sbjct: 85 VPVGAVLYGPDGAELAIGRNERELTGDPTAHAEVLALRRAAQRLGRWRLDDCTLVVTLEP 144 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 CTMCA AI+LAR+ + +GA PK G + + H PE+Y G+ E+ S +++ Sbjct: 145 CTMCAGAIALARVSTVVFGAWEPKTGAVGSLWDVLRDRRVTHRPEVYGGVLERESATLLR 204 Query: 143 DFFK 146 FF+ Sbjct: 205 AFFR 208 >gi|46190701|ref|ZP_00121128.2| COG0590: Cytosine/adenosine deaminases [Bifidobacterium longum DJO10A] gi|189440344|ref|YP_001955425.1| cytosine/adenosine deaminase [Bifidobacterium longum DJO10A] gi|239622901|ref|ZP_04665932.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312133678|ref|YP_004001017.1| cumb [Bifidobacterium longum subsp. longum BBMN68] gi|317482318|ref|ZP_07941338.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bifidobacterium sp. 12_1_47BFAA] gi|189428779|gb|ACD98927.1| Cytosine/adenosine deaminase [Bifidobacterium longum DJO10A] gi|239514898|gb|EEQ54765.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291517778|emb|CBK71394.1| tRNA-adenosine deaminase [Bifidobacterium longum subsp. longum F8] gi|311772943|gb|ADQ02431.1| CumB [Bifidobacterium longum subsp. longum BBMN68] gi|316916198|gb|EFV37600.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bifidobacterium sp. 12_1_47BFAA] gi|320459488|dbj|BAJ70109.1| putative cytidine/deoxycytidine deaminase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 149 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/141 (39%), Positives = 74/141 (52%), Gaps = 3/141 (2%) Query: 11 ALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 ALE A AA ++PVGAV VL+ +I+ R N D AHAEI+A+R + L Sbjct: 10 ALELAGQAAAAGDVPVGAV-VLDAAGQIVGRGYNTREADGDPLAHAEIIAMRQAAQALGA 68 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 L + L VTLEPC MCA A I + +GA +PK G + HSPE+ Sbjct: 69 WNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRDPHIGHSPEV 128 Query: 129 YPGISEQRSRQIIQDFFKERR 149 + G+ E + I+ DFF +RR Sbjct: 129 HGGVLEGECQSILTDFFAQRR 149 >gi|323525792|ref|YP_004227945.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1001] gi|323382794|gb|ADX54885.1| CMP/dCMP deaminase zinc-binding protein protein [Burkholderia sp. CCGE1001] Length = 227 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 69/122 (56%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I++ N D +AHAE++A+R +I+ LP +LYVTLEPC Sbjct: 72 VPVGAVLVRGDEVIAKGFNHPIGAHDPSAHAEMIALRTAAQIVENYRLPGCELYVTLEPC 131 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARI R+ +GA +PK G + + +H E+ G+ E ++ Sbjct: 132 LMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQLNHHTEVVGGVLESECGAALKS 191 Query: 144 FF 145 FF Sbjct: 192 FF 193 >gi|117617810|ref|YP_857319.1| tRNA-specific adenosine deaminase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559217|gb|ABK36165.1| tRNA-specific adenosine deaminase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 179 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 74/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A A EIPVGAV VL +++ NR+ D AHAE++AIR L Sbjct: 19 WMRHAMALAARAEGIGEIPVGAVLVLGGEVVGEGWNRSISEHDACAHAEVMAIRAAGVRL 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +R++R+ YGA + K G + + +H Sbjct: 79 QNYRLLDTTLYVTLEPCCMCAGALIHSRVKRVVYGARDLKTGAAGSVFEILQDPRHNHGV 138 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + DFF+ RR Sbjct: 139 ELTGGVLADACSAQLSDFFRRRR 161 >gi|23466072|ref|NP_696675.1| cytidine and deoxycytidylate deaminase [Bifidobacterium longum NCC2705] gi|213693307|ref|YP_002323893.1| CMP/dCMP deaminase, zinc-binding [Bifidobacterium longum subsp. infantis ATCC 15697] gi|23326799|gb|AAN25311.1| possible cytidine and deoxycytidylate deaminase [Bifidobacterium longum NCC2705] gi|213524768|gb|ACJ53515.1| CMP/dCMP deaminase, zinc-binding [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 158 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/141 (39%), Positives = 74/141 (52%), Gaps = 3/141 (2%) Query: 11 ALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 ALE A AA ++PVGAV VL+ +I+ R N D AHAEI+A+R + L Sbjct: 19 ALELAGQAAAAGDVPVGAV-VLDAAGQIVGRGYNTREADGDPLAHAEIIAMRQAAQALGA 77 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 L + L VTLEPC MCA A I + +GA +PK G + HSPE+ Sbjct: 78 WNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRDPHIGHSPEV 137 Query: 129 YPGISEQRSRQIIQDFFKERR 149 + G+ E + I+ DFF +RR Sbjct: 138 HGGVLEGECQSILTDFFAQRR 158 >gi|84495278|ref|ZP_00994397.1| possible cytidine and deoxycytidylate deaminase [Janibacter sp. HTCC2649] gi|84384771|gb|EAQ00651.1| possible cytidine and deoxycytidylate deaminase [Janibacter sp. HTCC2649] Length = 143 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 73/143 (51%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66 M AL+ A A ++PVGAV + + G RE+ D TAHAE++A+R R Sbjct: 1 MRHALDLAVRAGSAGDVPVGAVVLDPGGAVIGEGWNLREVDADPTAHAEVVALRAAARHT 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPC MCA A LARI R+ GA +PK G + H Sbjct: 61 GSWRLEDCTLVVTLEPCPMCAGAAMLARISRIVLGAWDPKLGATGSVWDVVRDRRATHRI 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E + Q++ DFF ERR Sbjct: 121 EVVGGVLEAEASQLLLDFFGERR 143 >gi|146293740|ref|YP_001184164.1| CMP/dCMP deaminase, zinc-binding [Shewanella putrefaciens CN-32] gi|145565430|gb|ABP76365.1| tRNA-adenosine deaminase [Shewanella putrefaciens CN-32] Length = 164 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 73/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A++ A+ A E+PVGAV V + + I+ N + D TAHAEIL +R + L Sbjct: 5 WMQVAMQMAEKAEAAGEVPVGAVLVKDGQQIATGYNLSISQHDPTAHAEILCLRSAGKKL 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LY+TLEPC MCA A+ +RI R+ YGA + K G +H Sbjct: 65 ENYRLLDATLYITLEPCAMCAGAMVHSRIARVVYGARDEKTGAAGTVVNLLQHPAFNHQV 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + + FFK RR Sbjct: 125 EVTSGVLAEACSAQLSRFFKRRR 147 >gi|315644422|ref|ZP_07897555.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus vortex V453] gi|315280172|gb|EFU43465.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus vortex V453] Length = 163 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 74/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ EA+ A E+P+GAV V ++II R N D TAHAE++AIR + L Sbjct: 19 WMREAIAEARKAEELGEVPIGAVIVRGDEIIGRGYNLRETTYDGTAHAEMVAIREASQHL 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI +R+ +L YG +PK G +H Sbjct: 79 GAWRLLDCRLYVTLEPCPMCAGAIVQSRVPQLIYGTGDPKAGCAGTLMNLLQEPRFNHRT 138 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ ++ FF+ R Sbjct: 139 TVIDGVLQEECASLLTQFFRRLR 161 >gi|229819017|ref|YP_002880543.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333] gi|229564930|gb|ACQ78781.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333] Length = 158 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/128 (41%), Positives = 71/128 (55%), Gaps = 1/128 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + ALE A+ A +++PVGAV + + ++I R NR D TAHAE++AIR L Sbjct: 7 IGLALELARGALETDDVPVGAVVLGPDGEVIGRGANRREADDDPTAHAEMIAIREAAAAL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 Q L L VTLEPCTMCA A LAR+ RL +GA +PK G + T +H Sbjct: 67 GQWRLEGCTLAVTLEPCTMCAGATVLARLPRLVFGAYDPKAGAAGSVTDVVRDPRLNHRV 126 Query: 127 EIYPGISE 134 E+ G+ E Sbjct: 127 EVTGGVRE 134 >gi|189485590|ref|YP_001956531.1| tRNA-specific adenosine deaminase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287549|dbj|BAG14070.1| tRNA-specific adenosine deaminase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 149 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 3/142 (2%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 AL+EA A E+P+GAV V +NKII+R N+ L D TAHAEI+A+R + L Sbjct: 4 ALKEASKARESREVPIGAVIVKDNKIIARGFNKCIALSDPTAHAEIVALRKAAKKLKNYR 63 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130 L + Y T+EPC MCA A++ ARI+++ +GA + K +N + + I Sbjct: 64 LNDCYAYATIEPCLMCAGALAKARIKKIIFGAFDKKADCYKNILKTGDIKKLSRRLVIVG 123 Query: 131 GISEQRSRQ---IIQDFFKERR 149 + S + II+DFFK+ R Sbjct: 124 KKEKHLSAECANIIKDFFKKIR 145 >gi|304410027|ref|ZP_07391646.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS183] gi|307302260|ref|ZP_07582018.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica BA175] gi|304351436|gb|EFM15835.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS183] gi|306914298|gb|EFN44719.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica BA175] Length = 175 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 73/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A+NA E+PVGAV V + + I+ N + D +AHAEIL +R R++ Sbjct: 16 WMQVAMLMAENAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLREAGRLV 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G +H Sbjct: 76 ENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHPAFNHQV 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI + FFK RR Sbjct: 136 EVTSGILADACSAQLSRFFKRRR 158 >gi|78485955|ref|YP_391880.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Thiomicrospira crunogena XCL-2] gi|78364241|gb|ABB42206.1| tRNA-adenosine deaminase [Thiomicrospira crunogena XCL-2] Length = 166 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ AL A+ A + EIPVGAV V ++K+I+ N+ + D TAHAE++A+R Sbjct: 17 WMTHALSLAKKAEQQGEIPVGAVLVKDSKLIAEGWNQTIQAHDPTAHAEVVALRKAGIEE 76 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L ++ LYVTLEPC MCA A+ AR++RL A + + G + +H Sbjct: 77 ENYRLNDLTLYVTLEPCPMCAGAMVHARLKRLVIAAKDFRTGAAGSLINLVQEPRLNHQV 136 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E + +++ FF++RR Sbjct: 137 KTDFGVLESEASEMLSGFFRKRR 159 >gi|149926554|ref|ZP_01914815.1| putative deaminase [Limnobacter sp. MED105] gi|149824917|gb|EDM84131.1| putative deaminase [Limnobacter sp. MED105] Length = 256 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 2/145 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL++A+ AA E+P+GA V++ K ++ A N L D AHAE+ AIR C+ + Sbjct: 24 WMELALQQARLAAQAGEVPIGAAVVIDGKAVADAHNAPVLLNDACAHAEVQAIRQACQAI 83 Query: 67 SQEIL-PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-GGGIENGTQFYTLATCHH 124 L + LYVTL+PC MC AI ARI R+ G + + G ++ + A H Sbjct: 84 GNYRLGAQATLYVTLQPCLMCIGAILHARIGRVVVGCAQSRYNGDLKQSLSVFEQAQAWH 143 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 G Q S +++ FFK RR Sbjct: 144 PCAFETGCMAQESEELLGSFFKARR 168 >gi|148242392|ref|YP_001227549.1| tRNA-specific adenosine deaminase [Synechococcus sp. RCC307] gi|147850702|emb|CAK28196.1| tRNA-specific adenosine deaminase [Synechococcus sp. RCC307] Length = 183 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M L A A R E+PV AV + + I NR +D HAE++A+R + Sbjct: 27 WMDRLLRLAAKAGQRGEVPVAAVVIDPLGRAIGWGSNRREAAQDPLGHAELVALRQASSL 86 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L VTLEPC MCA A+ AR+ R+ +GAS+PK G + T A+ HH Sbjct: 87 RRDWRFNQHTLLVTLEPCPMCAGALVQARMGRVVFGASDPKRGALGGCLNLSTDASAHHH 146 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + R+ +Q +F+++R Sbjct: 147 MEVIGGVRGEACREQLQAWFRQQR 170 >gi|241764554|ref|ZP_04762572.1| CMP/dCMP deaminase zinc-binding [Acidovorax delafieldii 2AN] gi|241365998|gb|EER60615.1| CMP/dCMP deaminase zinc-binding [Acidovorax delafieldii 2AN] Length = 454 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 45/127 (35%), Positives = 69/127 (54%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V + ++I+ N + D TAHAEI+A+R L L LYVTLEP Sbjct: 16 EVPVGAVVVKDGQVIATGRNAPVQSHDPTAHAEIVALRAAAEQLGNYRLDGCTLYVTLEP 75 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MC+ A+ AR+ R+ +GA +PK G + + +H ++ G+ ++ Sbjct: 76 CAMCSGAMLHARVPRVVFGAVDPKTGAAGSVLDLFGYTVLNHHTQVQGGVLAHDCGALLS 135 Query: 143 DFFKERR 149 FF++RR Sbjct: 136 TFFRQRR 142 >gi|296819611|ref|XP_002849875.1| tRNA specific adenosine deaminase [Arthroderma otae CBS 113480] gi|238840328|gb|EEQ29990.1| tRNA specific adenosine deaminase [Arthroderma otae CBS 113480] Length = 190 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 74/143 (51%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K VFM AL+ A+ A E PVG V V ++I N + + T HAE LAI Sbjct: 10 KHEVFMKMALKMAETALAAGETPVGCVLVNKGRVIGSGMNDTNKSLNGTRHAEFLAIEEA 69 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R + I E DLYVT+EPC MCA+A+ RIR +Y+G +N + GG ++ + Sbjct: 70 LRSHPRSIFRETDLYVTVEPCIMCASALRQYRIRSVYFGCANERFGGTGGVLTLHSDSAI 129 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 +Y GI + + +++ F+ Sbjct: 130 DPPYPVYGGIFRKEAIMLLRQFY 152 >gi|78066752|ref|YP_369521.1| tRNA-adenosine deaminase [Burkholderia sp. 383] gi|107028852|ref|YP_625947.1| CMP/dCMP deaminase, zinc-binding [Burkholderia cenocepacia AU 1054] gi|116689989|ref|YP_835612.1| CMP/dCMP deaminase, zinc-binding [Burkholderia cenocepacia HI2424] gi|170733328|ref|YP_001765275.1| CMP/dCMP deaminase zinc-binding [Burkholderia cenocepacia MC0-3] gi|77967497|gb|ABB08877.1| tRNA-adenosine deaminase [Burkholderia sp. 383] gi|105898016|gb|ABF80974.1| tRNA-adenosine deaminase [Burkholderia cenocepacia AU 1054] gi|116648078|gb|ABK08719.1| tRNA-adenosine deaminase [Burkholderia cenocepacia HI2424] gi|169816570|gb|ACA91153.1| CMP/dCMP deaminase zinc-binding [Burkholderia cenocepacia MC0-3] Length = 159 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/122 (38%), Positives = 68/122 (55%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I+R N D +AHAE+ A+RM + L +P +LYVTLEPC Sbjct: 17 VPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLEPC 76 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARI R+ YGA++PK G + + +H E+ G+ ++ Sbjct: 77 LMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAALKS 136 Query: 144 FF 145 FF Sbjct: 137 FF 138 >gi|325519416|gb|EGC98819.1| tRNA-adenosine deaminase [Burkholderia sp. TJI49] Length = 193 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/122 (38%), Positives = 68/122 (55%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I+R N D +AHAE+ A+RM + L +P +LYVTLEPC Sbjct: 50 VPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLEPC 109 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARI R+ YGA++PK G + + +H E+ G+ ++ Sbjct: 110 LMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAALKS 169 Query: 144 FF 145 FF Sbjct: 170 FF 171 >gi|227547038|ref|ZP_03977087.1| cytidine and deoxycytidylate deaminase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212455|gb|EEI80344.1| cytidine and deoxycytidylate deaminase [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 177 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/141 (39%), Positives = 74/141 (52%), Gaps = 3/141 (2%) Query: 11 ALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 ALE A AA ++PVGAV VL+ +I+ R N D AHAEI+A+R + L Sbjct: 38 ALELAGQAAAAGDVPVGAV-VLDAAGQIVGRGYNTREADGDPLAHAEIIAMRQAAQALGA 96 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 L + L VTLEPC MCA A I + +GA +PK G + HSPE+ Sbjct: 97 WNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRDPHIGHSPEV 156 Query: 129 YPGISEQRSRQIIQDFFKERR 149 + G+ E + I+ DFF +RR Sbjct: 157 HGGVLEGECQSILTDFFAQRR 177 >gi|261392718|emb|CAX50291.1| tRNA-specific adenosine deaminase [Neisseria meningitidis 8013] Length = 239 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ ++ EIPVGAV V + KII+ A N +V+ HAEI A+ + Sbjct: 95 FMCEALRQAEQSSADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI ++ ++ FF+ +R Sbjct: 215 AIRGGILQEECCAVLSRFFQNKR 237 >gi|307544260|ref|YP_003896739.1| CMP/dCMP deaminase, zinc-binding [Halomonas elongata DSM 2581] gi|307216284|emb|CBV41554.1| CMP/dCMP deaminase, zinc-binding [Halomonas elongata DSM 2581] Length = 155 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59 M+ +M A+++A+ A E+PVGAV V +I+ N D +AHAEI A+ Sbjct: 1 MRSDEYYMHRAMDQARRAEAAGEVPVGAVVVDRAGEIVGSGFNAPVSDHDPSAHAEIRAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R L L L+VTLEPC MC AI AR+ R+ YGA+ P+ G +E+ + Sbjct: 61 RDAGTRLGNYRLDGCTLFVTLEPCLMCTGAIIHARLARVVYGAAEPRSGMVESRANLFAQ 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ R + ++ FF ERR Sbjct: 121 PWYNHRVEVVGGVLAPRIAKHLKAFFAERR 150 >gi|282863444|ref|ZP_06272503.1| CMP/dCMP deaminase zinc-binding [Streptomyces sp. ACTE] gi|282561779|gb|EFB67322.1| CMP/dCMP deaminase zinc-binding [Streptomyces sp. ACTE] Length = 142 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 74/142 (52%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66 M AL EA AA ++PVGAV + + G+ RE D TAHAE+LA+R +L Sbjct: 1 MRQALHEAAQAASAGDVPVGAVVLGPDGAPLATGHNEREATGDPTAHAEVLALRRAASVL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA A+ +R+ R+ YGA + K G + +H P Sbjct: 61 GGWRLTGCTLVVTLEPCTMCAGALVQSRVARVVYGARDEKAGAAGSLWDVLRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 E+ G+ E+ + FF+ER Sbjct: 121 EVVYGVLEETCAAQLTAFFRER 142 >gi|325106234|ref|YP_004275888.1| CMP/dCMP deaminase zinc-binding protein [Pedobacter saltans DSM 12145] gi|324975082|gb|ADY54066.1| CMP/dCMP deaminase zinc-binding protein [Pedobacter saltans DSM 12145] Length = 157 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 74/143 (51%), Gaps = 5/143 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A +EA A ++E+P+GA+ V N K++ R N L DVTAHAE+ A + Sbjct: 18 FMKEAYKEALLAFDKDEVPIGAIIVANGKVVGRGHNLTERLNDVTAHAEMQAFTSASNTI 77 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L LYVT+EPC MCA A +I R+ +GA + K G Q H Sbjct: 78 GAKYLHNCTLYVTVEPCVMCAGASYWTQISRIVFGALDEKRGYSRLNPQI-----IHPKT 132 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + ++++FF ++R Sbjct: 133 EIVGGVMSEECAALMRNFFLKKR 155 >gi|291459912|ref|ZP_06599302.1| cytidine/deoxycytidylate deaminase family protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291417253|gb|EFE90972.1| cytidine/deoxycytidylate deaminase family protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 179 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 74/158 (46%), Gaps = 19/158 (12%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNK-------------------IISRAGNRNREL 47 M A+ EA+ A ++P+G + V + + II R NR Sbjct: 11 LMRLAIREAKKAERNGDVPIGCLIVYDGRLPGSRADQRAEEQSIRPGEIIGRGYNRRNRD 70 Query: 48 KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 K HAEI AI CR L L + + VTLEPC MCA AI ARI RL +GA NPK Sbjct: 71 KSALKHAEISAISKACRRLGDWRLEDCTMIVTLEPCPMCAGAILQARIPRLLFGAENPKA 130 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + L+ +H E+ P + + ++++ DFF Sbjct: 131 GFCGSVLDILQLSALNHRVELLPPVLREDCKRLMTDFF 168 >gi|206560408|ref|YP_002231172.1| putative deaminase [Burkholderia cenocepacia J2315] gi|198036449|emb|CAR52345.1| putative deaminase [Burkholderia cenocepacia J2315] Length = 198 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/122 (38%), Positives = 68/122 (55%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I+R N D +AHAE+ A+RM + L +P +LYVTLEPC Sbjct: 56 VPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQQLQNYRMPGCELYVTLEPC 115 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARI R+ YGA++PK G + + +H E+ G+ ++ Sbjct: 116 LMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAALKS 175 Query: 144 FF 145 FF Sbjct: 176 FF 177 >gi|254247929|ref|ZP_04941250.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Burkholderia cenocepacia PC184] gi|124872705|gb|EAY64421.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Burkholderia cenocepacia PC184] Length = 162 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/122 (38%), Positives = 68/122 (55%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I+R N D +AHAE+ A+RM + L +P +LYVTLEPC Sbjct: 20 VPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLEPC 79 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARI R+ YGA++PK G + + +H E+ G+ ++ Sbjct: 80 LMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAALKS 139 Query: 144 FF 145 FF Sbjct: 140 FF 141 >gi|327292493|ref|XP_003230945.1| tRNA-specific adenosine deaminase subunit TAD2 [Trichophyton rubrum CBS 118892] gi|326466882|gb|EGD92335.1| tRNA-specific adenosine deaminase subunit TAD2 [Trichophyton rubrum CBS 118892] Length = 189 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/145 (33%), Positives = 75/145 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + K VFM AL+ A+ A E PVG V V +++I N + + T HAE LAI Sbjct: 7 LSKHEVFMKMALKMAETALAVGETPVGCVLVNKDRVIGSGMNDTNKSLNGTRHAEFLAIE 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + I E DLYVT+EPC MCA+A+ +IR +Y+G +N + GG ++ Sbjct: 67 EALRSHPRSIFRETDLYVTVEPCIMCASALRQYQIRSVYFGCANERFGGTGGVLTLHSDP 126 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +Y GI + + +++ F+ Sbjct: 127 AIDQPYPVYGGIYRKEAIMLLRKFY 151 >gi|311742000|ref|ZP_07715810.1| cytidine and deoxycytidylate deaminase [Aeromicrobium marinum DSM 15272] gi|311314493|gb|EFQ84400.1| cytidine and deoxycytidylate deaminase [Aeromicrobium marinum DSM 15272] Length = 149 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 74/144 (51%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M ALEEA+ A ++PVGAV VL+ +I R N D HAE++A+R Sbjct: 7 MRLALEEARAALDTGDVPVGAV-VLDPAGDVIGRGRNTRERDGDPLGHAEVVALREAAER 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 Q L L VTLEPCTMCA A+ AR+ RL +GA + K G + + +H Sbjct: 66 TGQWRLEGCTLVVTLEPCTMCAGALVGARVDRLVFGAWDDKAGAVGSLWDVVRDRRLNHR 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+ G+ S ++++FF R Sbjct: 126 PEVVSGVLADESATLLREFFASHR 149 >gi|312621259|ref|YP_004022872.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor kronotskyensis 2002] gi|312201726|gb|ADQ45053.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor kronotskyensis 2002] Length = 143 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 74/132 (56%), Gaps = 3/132 (2%) Query: 18 AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLY 77 A+ N+IPV A V N KIIS N + K HAEILAI LS + L +++ Sbjct: 14 ASRSNDIPVAAAIVKNGKIISIKRN---DSKKAIYHAEILAIIDATSKLSTKDLRNCEMF 70 Query: 78 VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 VT EPC MC +AI L++++RLY+GA + K G E+ +H E+ GI E Sbjct: 71 VTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQNPFLNHKVEVIGGICEDEC 130 Query: 138 RQIIQDFFKERR 149 R +++ FF+E+R Sbjct: 131 RLLLKRFFEEKR 142 >gi|134295996|ref|YP_001119731.1| tRNA-adenosine deaminase [Burkholderia vietnamiensis G4] gi|134139153|gb|ABO54896.1| tRNA-adenosine deaminase [Burkholderia vietnamiensis G4] Length = 197 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 47/122 (38%), Positives = 68/122 (55%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I+R N D +AHAE+ A+RM + L +P +LYVTLEPC Sbjct: 55 VPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLEPC 114 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARI R+ YGA++PK G + + +H E+ G+ ++ Sbjct: 115 LMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAALKS 174 Query: 144 FF 145 FF Sbjct: 175 FF 176 >gi|319793607|ref|YP_004155247.1| cmp/dcmp deaminase zinc-binding protein [Variovorax paradoxus EPS] gi|315596070|gb|ADU37136.1| CMP/dCMP deaminase zinc-binding protein [Variovorax paradoxus EPS] Length = 368 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 71/126 (56%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V + ++I+ N D +AHAEI A+R G L L +L+VTLEPC Sbjct: 25 VPVGAVLVKDGQVIATGRNTPVAQHDPSAHAEINALRAGASALGNYRLDGCELFVTLEPC 84 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA A+ +R+ R+ +GA++PK G + + +H ++ G+ Q ++Q Sbjct: 85 AMCAGAMLHSRLARVVFGATDPKTGAAGSVLDLFAEPRLNHRTQVQGGVLAQECSAVLQG 144 Query: 144 FFKERR 149 FF++RR Sbjct: 145 FFQQRR 150 >gi|17541138|ref|NP_502546.1| hypothetical protein JC8.4 [Caenorhabditis elegans] gi|6425182|emb|CAB05231.1| C. elegans protein JC8.4, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 176 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/150 (35%), Positives = 84/150 (56%), Gaps = 16/150 (10%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR------ 60 F+ A E AQ A +E+PVG V V+N I R NR E D T HAE++A+ Sbjct: 13 FLEKAFELAQEALDEDEVPVGCVFVVNGTEIGRGRNRVNETGDPTRHAEMVAVTEMWKEH 72 Query: 61 -MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN--GTQFY 117 GC +++L + LYV+LEPC MC++A+ IR++ YGA NP+ GG+ + + Y Sbjct: 73 GTGC----EDLLKKSTLYVSLEPCIMCSSAMYQLGIRKMVYGAENPRFGGVRSVGSAEKY 128 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + + +I GI +RS +++ F+++ Sbjct: 129 RM---EDNVQIVAGIWSERSVAMLKTFYEK 155 >gi|297200779|ref|ZP_06918176.1| deaminase [Streptomyces sviceus ATCC 29083] gi|297147728|gb|EDY56383.2| deaminase [Streptomyces sviceus ATCC 29083] Length = 162 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 77/143 (53%), Gaps = 4/143 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRE-LKDVTAHAEILAIRMGCRI 65 M AL+EA A ++PVGAV + + + AG+ RE + D TAHAE+LAIR Sbjct: 22 MRLALDEAGRAG--TDVPVGAVVLSPDGTTVLAAGHNEREAVGDPTAHAEVLAIRRAAAE 79 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L L VTLEPCTMCA AI +R+ R+ YGA + K G + +H Sbjct: 80 LGEWRLTGCTLVVTLEPCTMCAGAIVQSRVDRVVYGARDEKAGAAGSLWDVVRDRRLNHR 139 Query: 126 PEIYPGISEQRSRQIIQDFFKER 148 PE+ G+ Q++ FF++R Sbjct: 140 PEVVEGVLAAECAQLLTAFFRDR 162 >gi|296455106|ref|YP_003662250.1| CMP/dCMP deaminase [Bifidobacterium longum subsp. longum JDM301] gi|296184538|gb|ADH01420.1| CMP/dCMP deaminase, zinc-binding protein [Bifidobacterium longum subsp. longum JDM301] Length = 174 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/141 (39%), Positives = 74/141 (52%), Gaps = 3/141 (2%) Query: 11 ALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 ALE A AA ++PVGAV VL+ +I+ R N D AHAEI+A+R + L Sbjct: 35 ALELAGQAAAAGDVPVGAV-VLDAAGQIVGRGYNTREADGDPLAHAEIIAMRQAAQALGA 93 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 L + L VTLEPC MCA A I + +GA +PK G + HSPE+ Sbjct: 94 WNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRDPHIGHSPEV 153 Query: 129 YPGISEQRSRQIIQDFFKERR 149 + G+ E + I+ DFF +RR Sbjct: 154 HGGVLEGECQSILTDFFAQRR 174 >gi|325266384|ref|ZP_08133062.1| tRNA-specific adenosine deaminase [Kingella denitrificans ATCC 33394] gi|324982177|gb|EGC17811.1| tRNA-specific adenosine deaminase [Kingella denitrificans ATCC 33394] Length = 241 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 79/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A AA E+PVGAV V I+++A NR +V+ HAEILA+ ++L Sbjct: 97 FMQAALVQAALAAEAGEVPVGAVVVHRGNIVAQAYNRCVADCNVSHHAEILALAQAGQVL 156 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E D+YV+LEPC MCA A+ AR+ R+ + AS PK G + + + Sbjct: 157 GSYRLNECDVYVSLEPCAMCAGALMQARVARVIFAASEPKTGAAGSVVNLFANKALNAHT 216 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ I+Q FF+ +R Sbjct: 217 AVSGGVLADEAQAILQQFFQNKR 239 >gi|217972561|ref|YP_002357312.1| zinc-binding CMP/dCMP deaminase [Shewanella baltica OS223] gi|217497696|gb|ACK45889.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS223] Length = 175 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 73/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A+NA E+PVGAV V + + I+ N + D +AHAEIL +R R++ Sbjct: 16 WMQVAMLMAENAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLREAGRLV 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G +H Sbjct: 76 ENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHPAFNHQV 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + FFK RR Sbjct: 136 EVTSGVLADACSAQLSRFFKRRR 158 >gi|192359003|ref|YP_001981836.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain-containing protein [Cellvibrio japonicus Ueda107] gi|190685168|gb|ACE82846.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Cellvibrio japonicus Ueda107] Length = 201 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/148 (34%), Positives = 72/148 (48%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + +M A+ A E+PVGAV V I N+ +D +AHAEI+A+R Sbjct: 8 QDDSYWMRRAIALASQGEALGEVPVGAVIVREGIAIGEGFNQPITSRDPSAHAEIVALRQ 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LP LYVTLEPCTMC A+ ARI RL YG + PK G + + + Sbjct: 68 AAAHLQNYRLPGATLYVTLEPCTMCVGALVHARITRLVYGTAEPKAGAVTSRARLLDADY 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + + FF++RR Sbjct: 128 VNHRVSYEGGLMAAECQHQLSHFFQQRR 155 >gi|167563146|ref|ZP_02356062.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia oklahomensis EO147] gi|167570332|ref|ZP_02363206.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia oklahomensis C6786] Length = 193 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALE A A E+PVGAV V +++I+R N D +AHAE+ A+R R L Sbjct: 31 YMRMALEAADEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARAL 90 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 +P +LYVTLEPC MC+ AI ARI R+ +GA +PK G + + A +H Sbjct: 91 RNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHT 150 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ FF ERR Sbjct: 151 AVEGGVLADECGAALKSFFAERR 173 >gi|312136100|ref|YP_004003438.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor owensensis OL] gi|311776151|gb|ADQ05638.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor owensensis OL] Length = 143 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 3/134 (2%) Query: 16 QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75 + A+ N+IPV A V + KIIS N + K HAEILAI LS + L + Sbjct: 12 EYASHSNDIPVAAAVVKDGKIISIKRNDS---KKAIYHAEILAIIDATSKLSTKDLRSCE 68 Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 ++VT EPC MC +AI L++++RLY+GA + K G E+ +H E+ GI E Sbjct: 69 MFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQHPFLNHKVEVIGGICED 128 Query: 136 RSRQIIQDFFKERR 149 R +++ FF+E+R Sbjct: 129 ECRLLLKRFFEEKR 142 >gi|170695254|ref|ZP_02886401.1| CMP/dCMP deaminase zinc-binding [Burkholderia graminis C4D1M] gi|170139874|gb|EDT08055.1| CMP/dCMP deaminase zinc-binding [Burkholderia graminis C4D1M] Length = 166 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/124 (37%), Positives = 68/124 (54%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I+ N D +AHAE++A+R ++ LP +LYVTLE Sbjct: 15 GEVPVGAVLVRGDEVIATGFNHPIGAHDPSAHAEMVALRAAAQVAQNYRLPGCELYVTLE 74 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI ARI R+ +GA +PK G + + +H E+ G+ E + Sbjct: 75 PCLMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQLNHHTEVTGGVLESECGAAL 134 Query: 142 QDFF 145 + FF Sbjct: 135 KSFF 138 >gi|126657691|ref|ZP_01728845.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Cyanothece sp. CCY0110] gi|126620908|gb|EAZ91623.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Cyanothece sp. CCY0110] Length = 163 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 74/144 (51%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRI 65 +M AL+ A+ AA ++PVGAV + I G ++E+ D T HAEI+AIR + Sbjct: 16 WMKEALKLAEIAANLGDVPVGAVIINRQGNILAEGYNSKEVNHDPTGHAEIIAIRQASQT 75 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L E LYVTLEPC MCA AI +R+ L YG + K G I +H Sbjct: 76 LKSWHLEECTLYVTLEPCIMCAGAIIQSRLGLLVYGVDDLKSGSIRTALNLPDSVASNHH 135 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI E RQ ++ +F +R Sbjct: 136 LSVLSGILEAECRQQLKKWFINKR 159 >gi|224111764|ref|XP_002315970.1| predicted protein [Populus trichocarpa] gi|222865010|gb|EEF02141.1| predicted protein [Populus trichocarpa] Length = 1071 Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 53/103 (51%), Positives = 63/103 (61%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +FM AL +A+ AA E+PVGAV V + KII+R N EL+D TAHAE++ IR Sbjct: 927 KIDEMFMREALLDAKKAADSWEVPVGAVMVHHGKIIARGYNLVEELRDSTAHAEMICIRE 986 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L L E LYVTLEPC MCA AI ARI L +GA N Sbjct: 987 ASNQLRSWRLSETTLYVTLEPCPMCAGAILQARINTLVWGAPN 1029 >gi|297568295|ref|YP_003689639.1| CMP/dCMP deaminase zinc-binding protein [Desulfurivibrio alkaliphilus AHT2] gi|296924210|gb|ADH85020.1| CMP/dCMP deaminase zinc-binding protein [Desulfurivibrio alkaliphilus AHT2] Length = 161 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 7/151 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K M ALE A+ AA R E+PVGA+ + +I++ GNR D + HAEI+ +R Sbjct: 13 KDTSLMHQALEAARAAAARGEVPVGALLIDRQGEILAVDGNRTIGDHDPSGHAEIVVLRR 72 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LYVTLEPC MC + ARI RL +GA++PK G + Y LA Sbjct: 73 AAARIGNHRLTGTTLYVTLEPCLMCVGVMIQARIERLVFGANDPKAGAV---VSLYRLAA 129 Query: 122 ---CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + + Q+++DFF+ RR Sbjct: 130 DPRLNHRLQVTAGVLARDAGQLLRDFFRARR 160 >gi|295698536|ref|YP_003603191.1| tRNA-specific adenosine deaminase [Candidatus Riesia pediculicola USDA] gi|291157478|gb|ADD79923.1| tRNA-specific adenosine deaminase [Candidatus Riesia pediculicola USDA] Length = 171 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 13/157 (8%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +KK +M+ +L+ A+ + + EIP+GAV + + I++ +GN D +AHAEI+ IR Sbjct: 12 LKKDFFWMNKSLDLAKKSEILGEIPIGAVLIYQDNIVASSGNEVILRNDPSAHAEIIVIR 71 Query: 61 MGCRILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY-- 117 G + L E + +YVT+ PC MC AI +RI R+ YG+ N K N F+ Sbjct: 72 EGAKHFKNYRLKENLTIYVTIFPCIMCMGAIFQSRISRVVYGSENYK-----NNLSFFLF 126 Query: 118 -----TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 ++ + +Y GI + I+++FFK+RR Sbjct: 127 EKNNTNISMNYGHITVYGGILSRSCSSILKNFFKKRR 163 >gi|291455623|ref|ZP_06595013.1| cytidine and deoxycytidylate deaminase family protein [Bifidobacterium breve DSM 20213] gi|291382551|gb|EFE90069.1| cytidine and deoxycytidylate deaminase family protein [Bifidobacterium breve DSM 20213] Length = 152 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 73/144 (50%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M ALE A+ AA ++PVGAV V + +II R N D AHAEI+A+R R Sbjct: 9 MMHGALELAKRAAAAGDVPVGAVVVDADGQIIGRGYNTREADGDPLAHAEIIAMREAARA 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + L VTLEPC MCA A I + +GA + K G + H+ Sbjct: 69 LGSWNLSDCTLAVTLEPCPMCAGACVQTHIGTIVFGAWDSKLGACGSIWDIPRDPHIGHA 128 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE++ G++E + ++ FF RR Sbjct: 129 PEVHGGVAEADCQTLLSTFFAHRR 152 >gi|163749537|ref|ZP_02156784.1| cytidine/deoxycytidylate deaminase family protein [Shewanella benthica KT99] gi|161330647|gb|EDQ01584.1| cytidine/deoxycytidylate deaminase family protein [Shewanella benthica KT99] Length = 189 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 73/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FMS A+E A+ A E+PVGAV + + +++S N L D +AHAE+ +R +++ Sbjct: 25 FMSMAMEMARKAEAVGEVPVGAVLIKDGELVSAGFNYCIGLHDPSAHAEMQCLRQAGKVI 84 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA A+ +RI RL +GA + K G +H Sbjct: 85 ENYRLLNTTLYVTLEPCAMCAGAMVHSRIERLVFGAKDDKTGAAGTVIDLVRHPAFNHQL 144 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + FF+ RR Sbjct: 145 QVSDGVLADECSAQLSQFFRRRR 167 >gi|320106996|ref|YP_004182586.1| CMP/dCMP deaminase zinc-binding protein [Terriglobus saanensis SP1PR4] gi|319925517|gb|ADV82592.1| CMP/dCMP deaminase zinc-binding protein [Terriglobus saanensis SP1PR4] Length = 171 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 75/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A+ EAQ A E+PVGA+ V +I+SR NR D + HAE++A+R Sbjct: 9 FMQAAIAEAQAAQAAGEVPVGAIVVSPTGEILSRGQNRVIRDHDPSGHAEMVALRAAGVA 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LYVTLEPC MCA AI ARI RL Y A +PK G + + +H Sbjct: 69 LENYRLTGCSLYVTLEPCAMCAGAILHARIARLVYAAPDPKAGACGSALEVMNHPRLNHR 128 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ ++Q FF+ RR Sbjct: 129 CEVVAGVLADECSTLLQTFFRSRR 152 >gi|254252116|ref|ZP_04945434.1| Cytidine/deoxycytidylate deaminase [Burkholderia dolosa AUO158] gi|124894725|gb|EAY68605.1| Cytidine/deoxycytidylate deaminase [Burkholderia dolosa AUO158] Length = 206 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 47/122 (38%), Positives = 67/122 (54%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I+R N D +AHAE+ A+RM + L +P +LYVTLEPC Sbjct: 64 VPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQRLQNYRMPGCELYVTLEPC 123 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARI R+ YGA +PK G + + +H E+ G+ ++ Sbjct: 124 LMCAGAIMHARIARVVYGAPDPKTGACGSVIDAFANTQLNHHAEVIGGVLADECGAALKS 183 Query: 144 FF 145 FF Sbjct: 184 FF 185 >gi|256827679|ref|YP_003151638.1| tRNA-adenosine deaminase [Cryptobacterium curtum DSM 15641] gi|256583822|gb|ACU94956.1| tRNA-adenosine deaminase [Cryptobacterium curtum DSM 15641] Length = 206 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/151 (35%), Positives = 76/151 (50%), Gaps = 12/151 (7%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN------------KIISRAGNRNRELKDVTAHA 54 +M AL EA++A EIP+GAV V ++I+RAGNR D HA Sbjct: 17 YMQMALNEARHAQGLGEIPIGAVVVYEPIDPATRRPLACPQVIARAGNRRETDADPAGHA 76 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E LA+R R L L +YVTLEPC MCA + ARI +GA +PK G + + Sbjct: 77 EFLALREAARRLGVWRLTGCTVYVTLEPCIMCAGLMHQARIDCCVFGAFDPKAGALGSLY 136 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + + +HS + G+ S Q+++ FF Sbjct: 137 RIHEDERLNHSFAVRSGVCADESAQLLRSFF 167 >gi|83647619|ref|YP_436054.1| cytosine/adenosine deaminases [Hahella chejuensis KCTC 2396] gi|83635662|gb|ABC31629.1| Cytosine/adenosine deaminases [Hahella chejuensis KCTC 2396] Length = 156 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 68/128 (53%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 +E+PVGA+ V + +++ N+ D TAHAEI AIR + LP LYVTLE Sbjct: 15 DEVPVGAILVRDGQVLGEGWNQPIRSHDPTAHAEISAIRKASAVAGNYRLPGSTLYVTLE 74 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC A+ AR+ RL +GA K G + + ++ + E G+ EQ Q++ Sbjct: 75 PCVMCLGALVHARVSRLVFGAYEHKAGAVCSSSRLLDEHNFNWKLEWSGGVLEQPCSQLL 134 Query: 142 QDFFKERR 149 FF+ RR Sbjct: 135 SGFFQRRR 142 >gi|311106622|ref|YP_003979475.1| tRNA-specific adenosine deaminase [Achromobacter xylosoxidans A8] gi|310761311|gb|ADP16760.1| tRNA-specific adenosine deaminase [Achromobacter xylosoxidans A8] Length = 163 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/127 (40%), Positives = 70/127 (55%), Gaps = 1/127 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL+EAQ A E+PVGA+ V I+ R NR D TAHAEI+A+R R Sbjct: 14 FMELALQEAQAAYDIGEVPVGALVVSAQGDILGRGYNRTIIDHDPTAHAEIVALRGAARA 73 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L LP + +YVTLEPC MC A+ AR+ R+ +GA +PK G + ++ +H Sbjct: 74 LENYRLPGITVYVTLEPCVMCIGAMLHARLARVVFGAYDPKTGACGSVLDVGSVPKLNHH 133 Query: 126 PEIYPGI 132 + G+ Sbjct: 134 TSVTGGV 140 >gi|27904732|ref|NP_777858.1| putative deaminase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|38372581|sp|Q89AM8|Y236_BUCBP RecName: Full=Uncharacterized protein bbp_236 gi|27904129|gb|AAO26963.1| putative deaminase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 162 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 70/143 (48%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM CA+ A+ + + E+PVGAV V NN II + N + D TAHAEI A+R G + L Sbjct: 8 FMKCAIFLAKISEMIGEVPVGAVLVFNNTIIGKGLNSSILNHDPTAHAEIKALRNGAKFL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MC AI +RI RL +GA + + Sbjct: 68 KNYRLLHTTLYVTLEPCIMCYGAIIHSRISRLVFGAKYKNLQKYICCKNHFFINKNFRKI 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I + E ++ FFK +R Sbjct: 128 SITQEVLESECSNLLSSFFKRKR 150 >gi|302872756|ref|YP_003841392.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor obsidiansis OB47] gi|302575615|gb|ADL43406.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor obsidiansis OB47] Length = 143 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 3/134 (2%) Query: 16 QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75 + A+ N+IPV A V + KIIS N + K HAEILAI LS + L + Sbjct: 12 EYASHSNDIPVAAAVVKDGKIISIKRNDS---KKAIYHAEILAIIDATSKLSTKDLRSCE 68 Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 ++VT EPC MC +AI L++++RLY+GA + K G E+ +H E+ GI E Sbjct: 69 MFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQNPFLNHKVEVIGGICED 128 Query: 136 RSRQIIQDFFKERR 149 R +++ FF+E+R Sbjct: 129 ECRLLLKRFFEEKR 142 >gi|306821661|ref|ZP_07455259.1| tRNA-specific adenosine deaminase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550406|gb|EFM38399.1| tRNA-specific adenosine deaminase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 153 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/148 (35%), Positives = 76/148 (51%), Gaps = 11/148 (7%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL A A +++E+PVG V V +++I+ N + K HAEILAI R L Sbjct: 6 FMKKALSNAIRAYIQDEVPVGCVIVKGDEVIASTYNTKKATKSAINHAEILAIDEASRKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + IL + D+YVTLEPC MC AI +RI+++Y GA++ G F + Sbjct: 66 GRFILDDCDMYVTLEPCLMCTGAILQSRIKKVYIGATDESMGA------FVSKIALVKDE 119 Query: 127 EIYP-----GISEQRSRQIIQDFFKERR 149 IYP + S I+ FF++ R Sbjct: 120 MIYPQKIDYAFKKTISGYILSRFFRKIR 147 >gi|300790762|ref|YP_003771053.1| cytidine and deoxycytidylate deaminase family protein [Amycolatopsis mediterranei U32] gi|299800276|gb|ADJ50651.1| cytidine and deoxycytidylate deaminase family protein [Amycolatopsis mediterranei U32] Length = 142 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 79/144 (54%), Gaps = 4/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A+ A ++P+GAV + + ++ A N EL D TAHAEILA+R +++ Sbjct: 1 MEAALEAAR--APGADVPIGAVVFGPDGVPLAAARNARIELGDPTAHAEILALRAAAQVV 58 Query: 67 SQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L VTLEPCTMCA A+ LARI RL +GA PK G + + +H Sbjct: 59 GDGWRLEGCTLAVTLEPCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVRDRRLNHR 118 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE++ G+ +++ +F RR Sbjct: 119 PEVHGGVLLDECAGLLETYFAMRR 142 >gi|238061540|ref|ZP_04606249.1| CMP/dCMP deaminase [Micromonospora sp. ATCC 39149] gi|237883351|gb|EEP72179.1| CMP/dCMP deaminase [Micromonospora sp. ATCC 39149] Length = 172 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 1/126 (0%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 +++PVGAV + +G REL D TAHAE+LA+R L + L + L VTL Sbjct: 47 DDVPVGAVIYGPDGTELASGRNERELTGDPTAHAEVLALRRAAERLGRWRLDDCTLVVTL 106 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA AI LARI + +GA PK G + +H PE+Y G+ E + + Sbjct: 107 EPCTMCAGAIVLARIATVVFGAWEPKTGAAGSLWDVLRDRRLNHRPEVYGGLLEAENSAV 166 Query: 141 IQDFFK 146 ++ FF+ Sbjct: 167 LRAFFR 172 >gi|312792797|ref|YP_004025720.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312878594|ref|ZP_07738458.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus 6A] gi|311794629|gb|EFR11094.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus 6A] gi|312179937|gb|ADQ40107.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 143 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 3/134 (2%) Query: 16 QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75 + A+ N+IPV A V + KI+S N + K HAEILAI LS + L + Sbjct: 12 EYASRSNDIPVAAAVVKDGKIVSIKRNDS---KKAIYHAEILAIIDATSKLSTKDLRSCE 68 Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 ++VT EPC MC +AI L++++RLY+GA + K G E+ +H E+ GI E Sbjct: 69 MFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQHPFLNHKVEVIGGICED 128 Query: 136 RSRQIIQDFFKERR 149 R +++ FF+E+R Sbjct: 129 ECRLLLKRFFEEKR 142 >gi|120598186|ref|YP_962760.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. W3-18-1] gi|120558279|gb|ABM24206.1| tRNA-adenosine deaminase [Shewanella sp. W3-18-1] Length = 164 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 73/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A++ A+ A E+PVGAV V + + I+ N + D +AHAEIL +R + L Sbjct: 5 WMQVAMQMAEKAEAAGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLRSAGKKL 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LY+TLEPC MCA A+ +RI R+ YGA + K G +H Sbjct: 65 ENYRLLDATLYITLEPCAMCAGAMVHSRIARVVYGARDEKTGAAGTVVNLLQHPAFNHQV 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + + FFK RR Sbjct: 125 EVTSGVLAEACSAQLSRFFKRRR 147 >gi|319427113|gb|ADV55187.1| CMP/dCMP deaminase zinc-binding protein [Shewanella putrefaciens 200] Length = 169 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 73/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A++ A+ A E+PVGAV V + + I+ N + D +AHAEIL +R + L Sbjct: 10 WMQVAMQMAEKAEAAGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLRSAGKKL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LY+TLEPC MCA A+ +RI R+ YGA + K G +H Sbjct: 70 ENYRLLDATLYITLEPCAMCAGAMVHSRIARVVYGARDEKTGAAGTVVNLLQHPAFNHQV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + + FFK RR Sbjct: 130 EVTSGVLAEACSAQLSRFFKRRR 152 >gi|319943546|ref|ZP_08017828.1| tRNA-specific adenosine deaminase [Lautropia mirabilis ATCC 51599] gi|319743361|gb|EFV95766.1| tRNA-specific adenosine deaminase [Lautropia mirabilis ATCC 51599] Length = 206 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 51/141 (36%), Positives = 71/141 (50%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + M A+++A NA L E+PVGAV V ++I+ N D TAHAEI +RM Sbjct: 22 HAMMRLAMDQALNAQLHGEVPVGAVLVKAGQVIATGYNHPIGSHDPTAHAEIRTLRMAAE 81 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + E LYVTLEPC MC A+ ARI R+ +GA +PK G +H Sbjct: 82 QLGNYRVGESTLYVTLEPCMMCLGAMLHARISRVVFGAPDPKTGVCGGVLDLPAEGRLNH 141 Query: 125 SPEIYPGISEQRSRQIIQDFF 145 + G+ +++Q FF Sbjct: 142 QTVVQGGLLADECGKLLQRFF 162 >gi|325846128|ref|ZP_08169222.1| cytidine and deoxycytidylate deaminase zinc-binding region [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481721|gb|EGC84756.1| cytidine and deoxycytidylate deaminase zinc-binding region [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 185 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 76/139 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ EA+ A L E+P+G V V N KII+R+ N + K HAEILAI + + Sbjct: 6 YMKEAINEAKLARLEEEVPIGCVIVKNGKIIARSHNYTYKGKSALKHAEILAIDKASKYV 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + +YVT+EPC+MCA AI +RI RL ++ K G + T + H Sbjct: 66 GDFRLEDCTMYVTMEPCSMCAGAIINSRIDRLVIALADVKRGACGSNTNITGDRSQLHFL 125 Query: 127 EIYPGISEQRSRQIIQDFF 145 + G+ + +S +I+Q FF Sbjct: 126 DAEFGLMKDQSLEILQSFF 144 >gi|291542828|emb|CBL15938.1| tRNA-adenosine deaminase [Ruminococcus bromii L2-63] Length = 152 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 1/126 (0%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V N++I++ NR + K+ HAE AI C+ L L ++YVTLEPC Sbjct: 24 VPVGAVIVRNDEIVATGRNRREQGKNALLHAETDAIYNACQKLGGWRLWNCEIYVTLEPC 83 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI A I ++Y+GA + K G T + + + PE GI ++ +++ D Sbjct: 84 PMCAGAIINAHIPKVYFGAYDLKNGACGTITNLFQMPF-NFKPESVGGIMQEECSKLLTD 142 Query: 144 FFKERR 149 FFK R Sbjct: 143 FFKNLR 148 >gi|312877655|ref|ZP_07737611.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus 6A] gi|311795548|gb|EFR11921.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus 6A] Length = 175 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 74/132 (56%), Gaps = 3/132 (2%) Query: 18 AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLY 77 A+ N+IPV A V + +IIS N + K HAEILAI LS + L +++ Sbjct: 46 ASRSNDIPVAAAVVKDGRIISIKRNDS---KKAIYHAEILAIIDATSKLSTKDLRSCEMF 102 Query: 78 VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 VT EPC MC +AI L++++RLY+GA + K G E+ +H E+ GI E Sbjct: 103 VTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQHPFLNHKVEVIGGICEDEC 162 Query: 138 RQIIQDFFKERR 149 R +++ FF+E+R Sbjct: 163 RLLLKRFFEEKR 174 >gi|307729964|ref|YP_003907188.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1003] gi|307584499|gb|ADN57897.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1003] Length = 350 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 77/139 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A A+ A E+PVGAV V +++I++ N D +AHAE++A+R +++ Sbjct: 184 FMALAQAAAEEARAAGEVPVGAVLVRGDEVIAKGFNHPISAHDPSAHAEMVALRAAAQVV 243 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP +LYVTLEPC MCA AI ARI R+ +GA +PK G + + +H Sbjct: 244 ENYRLPGCELYVTLEPCLMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQLNHHT 303 Query: 127 EIYPGISEQRSRQIIQDFF 145 E+ G+ E ++ FF Sbjct: 304 EVTGGVLENECGAALKSFF 322 >gi|94986787|ref|YP_594720.1| cytosine/adenosine deaminases [Lawsonia intracellularis PHE/MN1-00] gi|94731036|emb|CAJ54399.1| Cytosine/adenosine deaminases [Lawsonia intracellularis PHE/MN1-00] Length = 162 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 73/144 (50%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL EA +NE+PVGA+ V N KII + N D TAHAEILA+R + Sbjct: 18 LMDEALIEANQCTKKNEVPVGAIIVHKNGKIIGKGHNAPITTSDPTAHAEILALRTAGAV 77 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L VTLEPC MC AI ARI + YGA+ G I + + L ++ Sbjct: 78 QQNYRLQDCFLIVTLEPCLMCVGAIIQARIDGIVYGAAELNTGSITSCIAGFDLPFNNYK 137 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P GI + Q++ +FF + R Sbjct: 138 PWHMGGIKATQCSQLLHNFFYKLR 161 >gi|297572271|ref|YP_003698045.1| CMP/dCMP deaminase zinc-binding protein [Arcanobacterium haemolyticum DSM 20595] gi|296932618|gb|ADH93426.1| CMP/dCMP deaminase zinc-binding protein [Arcanobacterium haemolyticum DSM 20595] Length = 143 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+E A+ A ++PVGAV + + +I R N D HAE+ A+R R L Sbjct: 1 MHEAMEIARRAGADGDVPVGAVILGPDGGVIGRGWNTREADADPCGHAEVNALREAARAL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPCTMCA AI +R+ R+ +GA + K G + A +H Sbjct: 61 GRWNLSGCTLVVTLEPCTMCAGAIVNSRVSRVVFGAWDAKAGAAGSVRDVLRDARLNHVV 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E + I+QD+F+ RR Sbjct: 121 EVIGGLCEAENVAILQDWFEARR 143 >gi|257066772|ref|YP_003153028.1| CMP/dCMP deaminase zinc-binding [Anaerococcus prevotii DSM 20548] gi|256798652|gb|ACV29307.1| CMP/dCMP deaminase zinc-binding [Anaerococcus prevotii DSM 20548] Length = 180 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 54/148 (36%), Positives = 77/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K+ FM+ A+ EA+ A E+PVGAV V + KII R N + K HAE++AI+ Sbjct: 24 KEDYFFMAEAINEARVARFIEEVPVGAVVVYDGKIIGRGHNLTYKGKSALKHAELMAIKE 83 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L E +YVT+EPC+MCA AI +RI RL G + K G + T + Sbjct: 84 ASSWMDDFRLEECTMYVTMEPCSMCAGAIINSRIDRLVVGIRDHKRGACGSNTNVCGDRS 143 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E+ + IQ FF+ R Sbjct: 144 QLHFVDAEFGLMEEEALFEIQTFFRYLR 171 >gi|296392969|ref|YP_003657853.1| CMP/dCMP deaminase zinc-binding protein [Segniliparus rotundus DSM 44985] gi|296180116|gb|ADG97022.1| CMP/dCMP deaminase zinc-binding protein [Segniliparus rotundus DSM 44985] Length = 180 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 70/129 (54%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80 ++PVGAV + K ++RA N D TAHAEILA+R IL L L VTL Sbjct: 37 DVPVGAVVFGPDGKELARAANAREAFGDPTAHAEILALRQAAAILGDGWRLIGCTLAVTL 96 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A ARI R+ +GA PK G + + T +H P++ G+ E ++ Sbjct: 97 EPCTMCAGAAVNARIARIVFGAREPKTGAVGSLWDVVTDPRLNHRPQVRSGVLEAECAEL 156 Query: 141 IQDFFKERR 149 + FF++ R Sbjct: 157 TRSFFRKLR 165 >gi|284989070|ref|YP_003407624.1| CMP/dCMP deaminase protein [Geodermatophilus obscurus DSM 43160] gi|284062315|gb|ADB73253.1| CMP/dCMP deaminase zinc-binding protein [Geodermatophilus obscurus DSM 43160] Length = 154 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 2/130 (1%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79 + P+GAV + + +++ A N + D TAHAE+LA+R R+ L L VT Sbjct: 23 GDTPIGAVVLGPDGTVLAEAANEREKQGDPTAHAEVLALRAAARVHGDGWRLTGTTLVVT 82 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPCTMCA A LAR+ R+ YGA +PK G + +H P++ G+ + S Sbjct: 83 LEPCTMCAGASVLARVDRIVYGADDPKAGAAGSLWDVVRDRRLNHRPQVTGGVRAEESAT 142 Query: 140 IIQDFFKERR 149 +++ FF+ +R Sbjct: 143 LLRAFFRRQR 152 >gi|254822445|ref|ZP_05227446.1| hypothetical protein MintA_21101 [Mycobacterium intracellulare ATCC 13950] Length = 152 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 3/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + AL A A R+ +P+GAV + + ++RA N L D TAHAEILA+R + Sbjct: 7 LIRSALSVAATAGPRD-VPIGAVVISADGTELARAVNAREALGDPTAHAEILALRAAAEV 65 Query: 66 LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L L VT+EPCTMCA A+ L+RI RL +GA PK G + + +H Sbjct: 66 LGDGWRLEGATLAVTVEPCTMCAGALVLSRIGRLVFGAWEPKTGAVGSLWDVVRDRRLNH 125 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 PE+ G+ Q ++ FF +R Sbjct: 126 RPEVRGGVLAQECAAPLEAFFARQR 150 >gi|296271485|ref|YP_003654117.1| CMP/dCMP deaminase zinc-binding protein [Thermobispora bispora DSM 43833] gi|296094272|gb|ADG90224.1| CMP/dCMP deaminase zinc-binding protein [Thermobispora bispora DSM 43833] Length = 152 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 77/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA A R E+PVGAV + + +++ AGN D TAHAE+LA+R R L Sbjct: 9 MRLALAEAVRAGERGEVPVGAVVLGPDGTVLAAAGNDREASGDPTAHAEVLALRAAARAL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA A LAR+ R+ YGA++ K G + +H P Sbjct: 69 GTWRLSGCTLVVTLEPCTMCAGAAVLARVDRVVYGAADEKAGAAGSLWDVLRDRRLNHRP 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + +++ FF RR Sbjct: 129 EVVLGVLAEECGAVLRSFFAGRR 151 >gi|229816552|ref|ZP_04446851.1| hypothetical protein COLINT_03609 [Collinsella intestinalis DSM 13280] gi|229807887|gb|EEP43690.1| hypothetical protein COLINT_03609 [Collinsella intestinalis DSM 13280] Length = 632 Score = 87.8 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 57/143 (39%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+ AA E+P+GAV V II+RA NR +D +AHAE LA+ R L Sbjct: 20 FMREALAEARAAAEVGEVPIGAVVVHKGTIIARAHNRRELDEDPSAHAEFLAMMQAARTL 79 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +YVTLEPC MC+ + ARI R YGA++PKGG + +H+ Sbjct: 80 GRWRLSGCTVYVTLEPCLMCSGLMVNARIDRCVYGATDPKGGALGTLYDVSADPRLNHAF 139 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI E ++ FF+ R Sbjct: 140 PVVSGILEDECAAELRSFFRRLR 162 >gi|317507917|ref|ZP_07965613.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Segniliparus rugosus ATCC BAA-974] gi|316253782|gb|EFV13156.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Segniliparus rugosus ATCC BAA-974] Length = 166 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 70/129 (54%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80 ++PVGAV + ++RA N L D TAHAEILA+R +L L L VTL Sbjct: 28 DVPVGAVVFGPDGAELARAANAREALGDPTAHAEILALRQAAAVLGDGWRLVGCTLAVTL 87 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A ARI R+ +GA PK G + + T +H P + PG+ E ++ Sbjct: 88 EPCTMCAGAAVNARIGRIVFGAREPKTGAVGSLWDVVTDPRLNHRPLVRPGVLEPECAEL 147 Query: 141 IQDFFKERR 149 + FF++ R Sbjct: 148 TRSFFRKLR 156 >gi|312137792|ref|YP_004005128.1| cmp/dcmp deaminase [Rhodococcus equi 103S] gi|325676107|ref|ZP_08155789.1| cytidine and deoxycytidylate deaminase [Rhodococcus equi ATCC 33707] gi|311887131|emb|CBH46440.1| CMP/dCMP deaminase [Rhodococcus equi 103S] gi|325553147|gb|EGD22827.1| cytidine and deoxycytidylate deaminase [Rhodococcus equi ATCC 33707] Length = 152 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80 ++PVGAV + + ++RA N D TAHAEILA+R R+ L L VTL Sbjct: 24 DVPVGAVVFDADGVELARAANAREATGDPTAHAEILALRAAARVHGDGWRLEGATLAVTL 83 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ LAR+ R+ +GA PK G + + H P++ G+ E I Sbjct: 84 EPCTMCAGALVLARVERVVFGAWEPKTGAVGSLWDVVRDRRLTHRPQVRGGVLEGECAGI 143 Query: 141 IQDFFKERR 149 ++ FF+ +R Sbjct: 144 LESFFQGQR 152 >gi|296160206|ref|ZP_06843025.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. Ch1-1] gi|295889680|gb|EFG69479.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. Ch1-1] Length = 238 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 45/124 (36%), Positives = 68/124 (54%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I++ N D +AHAE++A+R + + LP +LYVTLE Sbjct: 87 GEVPVGAVLVRGDEVIAKGFNHPIGAHDPSAHAEMVALRAAAQAVENYRLPGCELYVTLE 146 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI ARI R+ +GA +PK G + + +H + G+ E + Sbjct: 147 PCLMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQLNHHTSVTGGVLESECGAAL 206 Query: 142 QDFF 145 + FF Sbjct: 207 KSFF 210 >gi|269792349|ref|YP_003317253.1| CMP/dCMP deaminase zinc-binding protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099984|gb|ACZ18971.1| CMP/dCMP deaminase zinc-binding protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 153 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 52/146 (35%), Positives = 73/146 (50%), Gaps = 6/146 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+ A ++PVGAV V+N ++ R N D HAE++AIR C L Sbjct: 3 FMREALREAELAMEAGDVPVGAVVVMNGLVVGRGRNVRELTGDPLGHAEMVAIRDACSAL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA AI RI +++ +PK G + + Y + P Sbjct: 63 GTWRLDGASLYVTLEPCVMCAGAILQCRISEVHFALRDPKAGAVGS---LYDVLRDPRQP 119 Query: 127 ---EIYPGISEQRSRQIIQDFFKERR 149 ++ G RS +++ FF+ R Sbjct: 120 FRCRVHQGEMRDRSAALLRGFFEGLR 145 >gi|262200337|ref|YP_003271545.1| CMP/dCMP deaminase zinc-binding protein [Gordonia bronchialis DSM 43247] gi|262083684|gb|ACY19652.1| CMP/dCMP deaminase zinc-binding protein [Gordonia bronchialis DSM 43247] Length = 143 Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 53/128 (41%), Positives = 72/128 (56%), Gaps = 2/128 (1%) Query: 24 IPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTLE 81 +P+GAV I ++RA NR D TAHAEILA+R LP + VT+E Sbjct: 16 VPIGAVVFDPGGIELARAANRREADADPTAHAEILALRAAAAAFGDGWRLPGCTIAVTVE 75 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PCTMCA AI+LARI L +GA PK G + + H P++ GI E R R+++ Sbjct: 76 PCTMCAGAITLARIDTLLFGAWEPKTGAVGSLWDVVRDPRLTHRPQVRGGIFEDRCRELM 135 Query: 142 QDFFKERR 149 DFF+++R Sbjct: 136 IDFFQQQR 143 >gi|222530354|ref|YP_002574236.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor bescii DSM 6725] gi|222457201|gb|ACM61463.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor bescii DSM 6725] Length = 143 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 3/134 (2%) Query: 16 QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75 + A+ N+IPV A V + +IIS N + K HAEILAI LS + L + Sbjct: 12 EYASRSNDIPVAAAVVKDRRIISIKRN---DSKKAIYHAEILAIIDATSKLSTKDLRSCE 68 Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 ++VT EPC MC +AI L++++RLY+GA + K G E+ +H E+ GI E Sbjct: 69 MFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQNPFLNHKVEVIGGICED 128 Query: 136 RSRQIIQDFFKERR 149 R +++ FF+E+R Sbjct: 129 ECRLLLKRFFEEKR 142 >gi|220910074|ref|YP_002485385.1| CMP/dCMP deaminase [Cyanothece sp. PCC 7425] gi|219866685|gb|ACL47024.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7425] Length = 174 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 69/144 (47%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+ A+ A E+PVGA+ V +++ NR D TAHAEILA+R + Sbjct: 13 WMEQAIALAEQAGAAGEVPVGAIVVSPQGELLGTGENRRERDGDPTAHAEILALRAAGQK 72 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LYV LEPC MCA AI ARI L YGA + K G I H Sbjct: 73 LQTWYLKNCTLYVNLEPCPMCAGAILQARIGLLVYGADDAKTGAIRTVLNLPDSRCSFHR 132 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 GI E RQ +Q +F +R Sbjct: 133 LTTLGGILETTCRQQLQTWFARKR 156 >gi|159035903|ref|YP_001535156.1| CMP/dCMP deaminase zinc-binding [Salinispora arenicola CNS-205] gi|157914738|gb|ABV96165.1| CMP/dCMP deaminase zinc-binding [Salinispora arenicola CNS-205] Length = 165 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 54/151 (35%), Positives = 79/151 (52%), Gaps = 6/151 (3%) Query: 2 KKGNVFMSCALEEAQNAA-----LRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAE 55 ++ ++M ALE A A + ++IPVGAV + + G REL D TAHAE Sbjct: 15 QRHELWMRRALEVAVTGADPTVTVVDDIPVGAVLLGPDGTELATGRNERELTGDPTAHAE 74 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +LA+R L + L L VTLEPCTMCA A+ LAR+ + +GA PK G + Sbjct: 75 VLALRRAAGRLGRWRLDGCTLVVTLEPCTMCAGALVLARVSTVVFGAWEPKTGAAGSLWD 134 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 +H PE+Y G+ + +++ FF+ Sbjct: 135 VLRDRRLNHRPEVYGGVLATETAAVLRAFFR 165 >gi|239980910|ref|ZP_04703434.1| cytidine/deoxycytidine deaminase [Streptomyces albus J1074] Length = 168 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 52/142 (36%), Positives = 74/142 (52%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EAQ A ++PVGAV + + +++S A N D TAHAEILA+R Sbjct: 27 MRQALAEAQRAGRGGDVPVGAVVLDPDGRLLSAAHNEREADGDPTAHAEILALRRAAARS 86 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L VTLEPCTMCA A +R+ R+ YGA + K G + +H P Sbjct: 87 GRWRLTDCTLVVTLEPCTMCAGAAVQSRVDRVVYGARDEKAGAAGSLWDVVRDRRLNHRP 146 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 E+ G+ ++ +FF+ R Sbjct: 147 EVIEGVLAADCAALLTEFFRAR 168 >gi|257057632|ref|YP_003135464.1| tRNA-adenosine deaminase [Saccharomonospora viridis DSM 43017] gi|256587504|gb|ACU98637.1| tRNA-adenosine deaminase [Saccharomonospora viridis DSM 43017] Length = 147 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 2/141 (1%) Query: 11 ALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 AL A+ A ++P+GA V + ++++ A N L D TAHAE+LA+R R+ Sbjct: 7 ALGFAERAVGTADVPIGAAVFSPDGRLLAGAHNARERLGDPTAHAEVLALREAARVHGDG 66 Query: 70 I-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 L L VT+EPCTMCA A+ LAR+ R+ +GA P+ G + + +H PE+ Sbjct: 67 WRLEGCTLAVTVEPCTMCAGALVLARVARVVFGAWEPRTGAVCSLWDVVRDRRLNHRPEV 126 Query: 129 YPGISEQRSRQIIQDFFKERR 149 G+ E ++ DFF ++R Sbjct: 127 VGGVLESECAALLNDFFADQR 147 >gi|116669211|ref|YP_830144.1| tRNA-adenosine deaminase [Arthrobacter sp. FB24] gi|116609320|gb|ABK02044.1| tRNA-adenosine deaminase [Arthrobacter sp. FB24] Length = 167 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 55/152 (36%), Positives = 78/152 (51%), Gaps = 11/152 (7%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRI 65 +M AL EA+ A ++P+GA+ + + I G RE D TAHAE++AIR Sbjct: 11 WMGLALAEARRALGTGDVPIGAIVIGPDGDILGTGRNEREAHGDPTAHAEMVAIREAAAR 70 Query: 66 LSQEILPEVD--------LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 L LP+ D L VTLEPC MCA A+ LARI R+ +GA + K G + Sbjct: 71 LQS--LPQGDGWRLAECTLVVTLEPCAMCAGAVVLARIPRVVFGAWDEKAGAAGSVFDIL 128 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+Y G+ EQ ++++FF R Sbjct: 129 RERRLNHWVEVYAGVREQECADLLREFFAGHR 160 >gi|88703683|ref|ZP_01101399.1| Cytidine and deoxycytidylate deaminase [Congregibacter litoralis KT71] gi|88702397|gb|EAQ99500.1| Cytidine and deoxycytidylate deaminase [Congregibacter litoralis KT71] Length = 167 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 75/149 (50%), Gaps = 11/149 (7%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ AL+ A+ AA E+PVGA+ V + +I+ N D TAHAEI A+R L Sbjct: 24 FMARALQLAKEAAEAGEVPVGALVVQDGRILGEGRNAQIGATDPTAHAEINALRAAASAL 83 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE------NGTQFYTLA 120 +P LYVTLEPC+MC A+ ARI L + A P+ G + N + F Sbjct: 84 DNYRMPGATLYVTLEPCSMCCGALVHARIGSLVFAAREPRAGAVVSTRNLLNESAFNHRV 143 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + E P S +++ FF+ERR Sbjct: 144 SWREDAENAPA-----SAALLRAFFRERR 167 >gi|291452772|ref|ZP_06592162.1| deaminase [Streptomyces albus J1074] gi|291355721|gb|EFE82623.1| deaminase [Streptomyces albus J1074] Length = 142 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 52/142 (36%), Positives = 74/142 (52%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EAQ A ++PVGAV + + +++S A N D TAHAEILA+R Sbjct: 1 MRQALAEAQRAGRGGDVPVGAVVLDPDGRLLSAAHNEREADGDPTAHAEILALRRAAARS 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L VTLEPCTMCA A +R+ R+ YGA + K G + +H P Sbjct: 61 GRWRLTDCTLVVTLEPCTMCAGAAVQSRVDRVVYGARDEKAGAAGSLWDVVRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 E+ G+ ++ +FF+ R Sbjct: 121 EVIEGVLAADCAALLTEFFRAR 142 >gi|332140490|ref|YP_004426228.1| cytidine/deoxycytidylate deaminase family protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327550512|gb|AEA97230.1| cytidine/deoxycytidylate deaminase family protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 223 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 73/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A +A E+PVGA VLN ++I N D +AHAE+ A++ + Sbjct: 62 WMKHALALADSAESIGEVPVGACVVLNGELIGEGYNTPISDHDPSAHAELRAVKQAASKV 121 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC+MCA + AR++R+ +GA + K G + +H Sbjct: 122 QNYRLIDATLYVTLEPCSMCAGMLVHARVKRVVFGAKDAKTGAAGSVMNLLQHPALNHQV 181 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ + DFF++RR Sbjct: 182 DIVSGVLASTCANKLSDFFRKRR 204 >gi|317403100|gb|EFV83631.1| zinc-binding hydrolase [Achromobacter xylosoxidans C54] Length = 163 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 50/127 (39%), Positives = 71/127 (55%), Gaps = 1/127 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ AL+EA+ A E+PVGA+ V I+ R NR D TAHAEI+A+R R Sbjct: 14 FMTLALDEARAAYDIGEVPVGALVVSAQGDILGRGYNRTIIDHDPTAHAEIVALRGAARA 73 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L LP + +YVTLEPC MC A+ AR+ R+ +GA +PK G + ++ +H Sbjct: 74 LENYRLPGITVYVTLEPCVMCIGAMLHARLARVVFGAYDPKTGACGSVLDVGSVPRLNHH 133 Query: 126 PEIYPGI 132 + G+ Sbjct: 134 TSVTGGV 140 >gi|253580414|ref|ZP_04857679.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848144|gb|EES76109.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 181 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 74/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ +A+ A E+P+G V V KII+R NR K+ +HAE+ AIR + L Sbjct: 16 FMKEAIRQAKKAEALEEVPIGCVIVHEGKIIARGYNRRNTDKNTLSHAELNAIRKASKKL 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +YVTLEPC MC+ A+ +RI + G N K G + + +H Sbjct: 76 GDWRLEGCTMYVTLEPCQMCSGALVQSRIDEVVIGCMNAKAGCAGSVMNLLQVDGFNHQV 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ E+ ++ +FF++ R Sbjct: 136 KIIQGVLEEECSSMLSEFFRKLR 158 >gi|153001509|ref|YP_001367190.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS185] gi|151366127|gb|ABS09127.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS185] Length = 174 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 73/149 (48%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK +M A+ A+ A E+PVGAV V + I+ N + D +AHAEIL +R Sbjct: 9 MKLDEHWMQVAMLMAEKAEAEGEVPVGAVLVKDGLQIATGYNLSISQHDPSAHAEILCLR 68 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G Sbjct: 69 EAGRLVENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHP 128 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + FFK RR Sbjct: 129 AFNHQVEVTSGVLADACSAQLSRFFKRRR 157 >gi|209518682|ref|ZP_03267499.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. H160] gi|209500881|gb|EEA00920.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. H160] Length = 230 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 51/141 (36%), Positives = 74/141 (52%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A A+ E+PVGAV V +++I+ N D +AHAE++A+R + L Sbjct: 62 FMALAQAAAEEGRAAGEVPVGAVLVRGDEVIATGFNHPIGAHDPSAHAEMVALRAAAQSL 121 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP +LYVTLEPC MCA AI ARI R+ +GA +PK G + + +H Sbjct: 122 ENYRLPGCELYVTLEPCLMCAGAIMHARISRVVFGARDPKTGACGSVVDAFANPQLNHHT 181 Query: 127 EIYPGISEQRSRQIIQDFFKE 147 + G+ E ++ FF E Sbjct: 182 TVSGGVLEAECSAALRSFFAE 202 >gi|328676234|gb|AEB27104.1| tRNA-specific adenosine-34 deaminase [Francisella cf. novicida Fx1] Length = 153 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A ++A A E+P+GAV V +++II++ N+ L D TAHAEIL +R L Sbjct: 11 FMQKAYQQALLAYQAGEVPIGAVLVRDDQIIAQNFNQTIGLNDPTAHAEILVLRSAALKL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MC + AR+ L Y + + G + + +H+ Sbjct: 71 DNYRLVNTKLYVTLEPCIMCLGGLIQARVPELVYACDDSRVGAFSR-EKLHHNKNINHNL 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++++DFFK+RR Sbjct: 130 GVTAGVMADECGKLLKDFFKQRR 152 >gi|157961143|ref|YP_001501177.1| zinc-binding CMP/dCMP deaminase [Shewanella pealeana ATCC 700345] gi|157846143|gb|ABV86642.1| CMP/dCMP deaminase zinc-binding [Shewanella pealeana ATCC 700345] Length = 163 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 48/138 (34%), Positives = 73/138 (52%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A++ A A + E+PVGAV V + +++S N + L D +AHAE+ +R +I+ Sbjct: 1 MKMAMDMAIKAEEKGEVPVGAVLVKDGEVVSAGFNFSIGLHDPSAHAEMQCLRQAGQIMQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA AI +RI RL +GA + K G + +H + Sbjct: 61 NYRLLDTTLYVTLEPCAMCAGAIVHSRINRLVFGARDEKTGAAGTVIDIVRHSAFNHQVD 120 Query: 128 IYPGISEQRSRQIIQDFF 145 + G+ E + + FF Sbjct: 121 VSSGVLETECSEQLSAFF 138 >gi|256786485|ref|ZP_05524916.1| deaminase [Streptomyces lividans TK24] Length = 151 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 2/128 (1%) Query: 23 EIPVGAVAVL-NNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PVGAV + + + + AG+ RE D TAHAE+LAIR L + L L VTL Sbjct: 24 DVPVGAVVLAPDGRTVLSAGHNEREATGDPTAHAEVLAIRRAAGELGEWRLSGCTLVVTL 83 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ +R+ R+ YGA + K G + +H PE+ G+ ++ Sbjct: 84 EPCTMCAGALVQSRVDRVVYGARDDKAGAAGSLWDVVRDRRLNHRPEVIEGVLADDCARL 143 Query: 141 IQDFFKER 148 + DFF++R Sbjct: 144 LTDFFRDR 151 >gi|116070709|ref|ZP_01467978.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. BL107] gi|116066114|gb|EAU71871.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. BL107] Length = 157 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M L+ AQ L E+PV AV + + + I NR +D HAE++A+R I Sbjct: 10 WMKVLLQRAQVNGLSGEVPVAAVVLGPDGRAIGHGRNRRETEQDPLGHAELVALRQAALI 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L VTLEPC MCA A+ AR+ + +GA + K GG+ T + HH Sbjct: 70 LGDWRFNQCCLIVTLEPCPMCAGALVQARMGTVVFGAHDRKRGGLGGTMNLSTHPSAHHK 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G+ E + ++ +FK+RR Sbjct: 130 MTVIGGVMEAEASTQLEQWFKQRR 153 >gi|160876246|ref|YP_001555562.1| zinc-binding CMP/dCMP deaminase [Shewanella baltica OS195] gi|160861768|gb|ABX50302.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS195] gi|315268435|gb|ADT95288.1| CMP/dCMP deaminase zinc-binding protein [Shewanella baltica OS678] Length = 175 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 72/143 (50%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A+ A E+PVGAV V + + I+ N + D +AHAEIL +R R++ Sbjct: 16 WMQVAMLMAEKAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLREAGRLV 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G +H Sbjct: 76 ENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHPAFNHQV 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + FFK RR Sbjct: 136 EVTSGVLADACSAQLSRFFKRRR 158 >gi|91783891|ref|YP_559097.1| tRNA-adenosine deaminase [Burkholderia xenovorans LB400] gi|91687845|gb|ABE31045.1| tRNA-adenosine deaminase [Burkholderia xenovorans LB400] Length = 196 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 45/124 (36%), Positives = 68/124 (54%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I++ N D +AHAE++A+R + + LP +LYVTLE Sbjct: 41 GEVPVGAVLVRGDEVIAKGFNHPIGAHDPSAHAEMVALRAAAQAVENYRLPGCELYVTLE 100 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI ARI R+ +GA +PK G + + +H + G+ E + Sbjct: 101 PCLMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQLNHHTTVTGGVLESECGAAL 160 Query: 142 QDFF 145 + FF Sbjct: 161 KAFF 164 >gi|328950667|ref|YP_004368002.1| tRNA(Ile)-lysidine synthase [Marinithermus hydrothermalis DSM 14884] gi|328450991|gb|AEB11892.1| tRNA(Ile)-lysidine synthase [Marinithermus hydrothermalis DSM 14884] Length = 528 Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 7/129 (5%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 + E+P+GAV V + +++ A N +D TAHAE+LA+R R + +++LP LYVTL Sbjct: 401 QGEVPIGAVLVRDGAVLAEAANAVEASRDATAHAELLALRTALRRVGEKVLPGATLYVTL 460 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MC AI AR+ R+ YG N K G +T+ + G E ++ Sbjct: 461 EPCPMCYGAILEARVARVVYGVENLKAGA-------FTVHGLEPRVALEAGRVEGECAKV 513 Query: 141 IQDFFKERR 149 ++DFF R Sbjct: 514 LKDFFARLR 522 >gi|145298514|ref|YP_001141355.1| cytosine/adenosine deaminase [Aeromonas salmonicida subsp. salmonicida A449] gi|142851286|gb|ABO89607.1| cytosine/adenosine deaminase [Aeromonas salmonicida subsp. salmonicida A449] Length = 199 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 55/145 (37%), Positives = 76/145 (52%), Gaps = 4/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A A EIPVGAV VL ++++ GNR+ D AHAEI+AIR L Sbjct: 39 WMRHAMALAARAEGIGEIPVGAVLVLGDEVVGEGGNRSISEHDACAHAEIMAIRAAGARL 98 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +R++R+ +GA + K G G+ F L H+ Sbjct: 99 ENYRLIDTVLYVTLEPCCMCAGALIHSRVKRVVFGARDLKTGAA--GSVFDILQDPRHNH 156 Query: 127 EI--YPGISEQRSRQIIQDFFKERR 149 + G+ + FFK RR Sbjct: 157 RVSLTGGVLADACSAQLSAFFKRRR 181 >gi|328675327|gb|AEB28002.1| tRNA-specific adenosine-34 deaminase [Francisella cf. novicida 3523] Length = 153 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A E+A A E+P+GAV V +++II+ N+ L D TAHAEIL +R + Sbjct: 11 FMQKAYEQALLAHQAGEVPIGAVLVRDSQIIAENFNQTITLNDPTAHAEILVLRSAALEV 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MC + AR+ L Y + + G + + +H+ Sbjct: 71 GNYRLINTKLYVTLEPCIMCLGGLIQARVSELVYACDDSRVGAFSR-EKLHQNKNINHNL 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++++DFFK+RR Sbjct: 130 GVTAGVMADECAKLLKDFFKQRR 152 >gi|296128347|ref|YP_003635597.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas flavigena DSM 20109] gi|296020162|gb|ADG73398.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas flavigena DSM 20109] Length = 176 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 5/145 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA+ A ++PVGAV + + ++ R N + D T HAE++A+R L Sbjct: 34 MDLALVEARAALDSGDVPVGAVVLGPDGAVVGRGRNVREAVADPTGHAEVVAMREAAATL 93 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CHH 124 + L L VTLEPC MCA A+ AR+ RL GA + K G G+Q+ + H Sbjct: 94 GRWRLDGCTLVVTLEPCLMCAGAVLQARVPRLVLGAWDEKAGAC--GSQWDVVRDRRALH 151 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ PG+ + S +++DFF R Sbjct: 152 RVEVVPGVRAEESATLLRDFFHPHR 176 >gi|182418731|ref|ZP_02950004.1| tRNA-specific adenosine deaminase [Clostridium butyricum 5521] gi|237669698|ref|ZP_04529675.1| tRNA-specific adenosine deaminase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377425|gb|EDT74981.1| tRNA-specific adenosine deaminase [Clostridium butyricum 5521] gi|237654772|gb|EEP52335.1| tRNA-specific adenosine deaminase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 149 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 49/102 (48%), Positives = 59/102 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A EA A + EIPVGAV V + II R N L DVTAHAEILAI+ L Sbjct: 3 FIDEAKAEAIKAYDKGEIPVGAVIVKDGVIIGRGHNLKETLNDVTAHAEILAIKEASNNL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 L ++YVTLEPC MCA+AI +RI ++Y G N G Sbjct: 63 GDWRLDGAEMYVTLEPCPMCASAIVQSRISKVYIGTFNKDMG 104 >gi|227499915|ref|ZP_03930008.1| nucleoside deaminase [Anaerococcus tetradius ATCC 35098] gi|227218024|gb|EEI83297.1| nucleoside deaminase [Anaerococcus tetradius ATCC 35098] Length = 169 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 74/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA+ A E+PVGAV VL+ KII R N + K HAEI+AI+ + Sbjct: 19 FMGEAINEARLARFIEEVPVGAVIVLDGKIIGRGHNYTFKGKSALKHAEIMAIKEASAYI 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +YVT+EPC+MCA AI +RI RL G + K G + T + H Sbjct: 79 DDFRLERATMYVTMEPCSMCAGAIINSRIDRLVIGIRDHKRGACGSNTNITGDRSQLHYL 138 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ + IQ FF+ R Sbjct: 139 DAEFGLRDEEALYEIQTFFRYLR 161 >gi|296141715|ref|YP_003648958.1| CMP/dCMP deaminase zinc-binding protein [Tsukamurella paurometabola DSM 20162] gi|296029849|gb|ADG80619.1| CMP/dCMP deaminase zinc-binding protein [Tsukamurella paurometabola DSM 20162] Length = 144 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 73/144 (50%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR-MGCRI 65 M ALE A + +++PVGAV + + +++RAGNR L D TAHAE+LAIR R Sbjct: 1 MGLALEAAGLSG-PDDVPVGAVILDPDGVVLARAGNRREALADPTAHAEVLAIREAATRF 59 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L VTLEPC MCA A+ ARI RL +GA PK G + + H Sbjct: 60 GDGWRLGGCTLAVTLEPCAMCAGALVSARIERLVFGAYEPKTGAVGSVWDVVRDPRVTHR 119 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI ++ DFF R Sbjct: 120 VSVRGGIRAGECGALLTDFFAPHR 143 >gi|148828084|ref|YP_001292837.1| hypothetical protein CGSHiGG_08090 [Haemophilus influenzae PittGG] gi|148719326|gb|ABR00454.1| hypothetical protein CGSHiGG_08090 [Haemophilus influenzae PittGG] Length = 125 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 53/111 (47%), Positives = 66/111 (59%), Gaps = 1/111 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A A EIPVGAV V + + II N + D TAHAEI+A+R G + + Sbjct: 15 MRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 L LYVTLEPCTMCA AI +RI+RL +GAS+ K G I + F+ Sbjct: 75 QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFLFF 125 >gi|168039996|ref|XP_001772482.1| predicted protein [Physcomitrella patens subsp. patens] gi|162676279|gb|EDQ62764.1| predicted protein [Physcomitrella patens subsp. patens] Length = 353 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 48/114 (42%), Positives = 63/114 (55%), Gaps = 11/114 (9%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A EA+ A R E+PVG V V + ++I R N E ++ T HAE++AI M Sbjct: 168 FMKLAFIEAREALARLEVPVGCVIVNDGEVIGRGSNCTNETRNATRHAEMVAIDMVLSKW 227 Query: 67 SQ-----------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 Q E + DLYVT EPC MCAAA+SL+ R++YYG N + GG Sbjct: 228 QQLSATPNVNPSTEGFQQCDLYVTCEPCIMCAAALSLSGFRKIYYGCDNERFGG 281 >gi|317123562|ref|YP_004097674.1| tRNA-adenosine deaminase [Intrasporangium calvum DSM 43043] gi|315587650|gb|ADU46947.1| tRNA-adenosine deaminase [Intrasporangium calvum DSM 43043] Length = 190 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 +++PVGAV + ++ +I R N EL D T HAE++A+R + L L VTL Sbjct: 37 DDVPVGAVVIGSDGLVIGRGRNVREELGDPTGHAEVIALRSAAAAVGTWRLDGATLAVTL 96 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A AR+ R+ +GA +PK G + H ++ G+ + + + Sbjct: 97 EPCVMCAGAAIAARVERIVFGAWDPKAGACGSVWDLTRDPLATHRADVVGGVRAEEAATL 156 Query: 141 IQDFFKERR 149 + DFF+ RR Sbjct: 157 LVDFFERRR 165 >gi|21222441|ref|NP_628220.1| deaminase [Streptomyces coelicolor A3(2)] gi|289770376|ref|ZP_06529754.1| deaminase [Streptomyces lividans TK24] gi|13122131|emb|CAC32309.1| putative deaminase [Streptomyces coelicolor A3(2)] gi|289700575|gb|EFD68004.1| deaminase [Streptomyces lividans TK24] Length = 143 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 2/128 (1%) Query: 23 EIPVGAVAVL-NNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PVGAV + + + + AG+ RE D TAHAE+LAIR L + L L VTL Sbjct: 16 DVPVGAVVLAPDGRTVLSAGHNEREATGDPTAHAEVLAIRRAAGELGEWRLSGCTLVVTL 75 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ +R+ R+ YGA + K G + +H PE+ G+ ++ Sbjct: 76 EPCTMCAGALVQSRVDRVVYGARDDKAGAAGSLWDVVRDRRLNHRPEVIEGVLADDCARL 135 Query: 141 IQDFFKER 148 + DFF++R Sbjct: 136 LTDFFRDR 143 >gi|254430861|ref|ZP_05044564.1| tRNA-specific adenosine deaminase [Cyanobium sp. PCC 7001] gi|197625314|gb|EDY37873.1| tRNA-specific adenosine deaminase [Cyanobium sp. PCC 7001] Length = 206 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M L AQ EIPV A AVL+ + I NR +D HAE++A+R + Sbjct: 53 WMERLLRCAQRVGEDGEIPV-AAAVLDQHGRCIGWGCNRRERQQDPLGHAELVALRQASQ 111 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 +L L L VTLEPC MCA A+ ARI L YGA +PK G + + + HH Sbjct: 112 LLGDWRLNSCTLLVTLEPCPMCAGALVQARIGTLVYGAPDPKRGAVGSCLDLVRHPSAHH 171 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + G++ +++ ++++ +F++RR Sbjct: 172 HMRVVGGLAGEQAGELLKAWFRQRR 196 >gi|302383496|ref|YP_003819319.1| CMP/dCMP deaminase zinc-binding protein [Brevundimonas subvibrioides ATCC 15264] gi|302194124|gb|ADL01696.1| CMP/dCMP deaminase zinc-binding protein [Brevundimonas subvibrioides ATCC 15264] Length = 150 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/130 (41%), Positives = 71/130 (54%), Gaps = 2/130 (1%) Query: 22 NEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 E+PVGAV V +++ N D TAHAEI AIR L + LYVT Sbjct: 15 GEVPVGAVIVDETTGTVVATGANAPISGHDPTAHAEIQAIRAAAAATGNYRLTGLTLYVT 74 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA AIS ARI R+ +GA +PKGG + +G + + T H P I G+ S + Sbjct: 75 LEPCAMCAGAISHARIGRVVWGADDPKGGAVIHGPRLFDQPTLHSRPVIEGGVLADASAE 134 Query: 140 IIQDFFKERR 149 ++ FF+ RR Sbjct: 135 SLRAFFRARR 144 >gi|256827973|ref|YP_003156701.1| CMP/dCMP deaminase zinc-binding [Desulfomicrobium baculatum DSM 4028] gi|256577149|gb|ACU88285.1| CMP/dCMP deaminase zinc-binding [Desulfomicrobium baculatum DSM 4028] Length = 190 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 74/144 (51%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL+ A A R ++PVGAV V N +I+ R NR D TAHAEILA+R Sbjct: 35 FMCEALQLAGLAEGRGDVPVGAVVVDGNGRILGRGENRTIFENDPTAHAEILALRQAGAK 94 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L + L VTLEPC MC A+ AR+ + Y A +PK G + + L +H Sbjct: 95 VGNHRLTDAVLVVTLEPCIMCLGAVIQARLAGVVYAAKDPKAGCLVSRMSGTELPWSNHH 154 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 G+ EQ + FF++RR Sbjct: 155 FWSLGGVLEQECSAKLSGFFQKRR 178 >gi|56707349|ref|YP_169245.1| zinc-binding domain-containing protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110669819|ref|YP_666376.1| zinc-binding domain-containing protein [Francisella tularensis subsp. tularensis FSC198] gi|56603841|emb|CAG44817.1| Zinc-binding domain protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320152|emb|CAL08200.1| Zinc-binding domain protein [Francisella tularensis subsp. tularensis FSC198] gi|282158481|gb|ADA77872.1| Zinc-binding domain protein [Francisella tularensis subsp. tularensis NE061598] Length = 153 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A ++A A E+P+GAV V +++II + N+ L D TAHAEIL +R L Sbjct: 11 FMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLRSAALKL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MC + AR+ L Y + + G + + +H+ Sbjct: 71 GNYRLVNTKLYVTLEPCIMCLGGLIQARVPELVYACDDSRVGAFSR-EKLHHNKNINHNL 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++++DFFK+RR Sbjct: 130 GVTAGVMADECSKLLKDFFKQRR 152 >gi|330805063|ref|XP_003290507.1| hypothetical protein DICPUDRAFT_81234 [Dictyostelium purpureum] gi|325079386|gb|EGC32989.1| hypothetical protein DICPUDRAFT_81234 [Dictyostelium purpureum] Length = 259 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/121 (42%), Positives = 72/121 (59%), Gaps = 13/121 (10%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++E + A E+PV V V NN+II+R N+ K+ T HAE+ A L Sbjct: 46 FMKEAVKEGEKALKEGEVPVACVIVHNNQIIARGSNKTNIKKNGTRHAELEAFDQ--IFL 103 Query: 67 SQEI--------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 ++E+ L E DLYVT+EPC MCA A+SLA+I R+++G N K GG NG+ Y+ Sbjct: 104 NKELNERFKDTLLVECDLYVTVEPCLMCAGALSLAKINRVFFGCHNDKFGG--NGS-VYS 160 Query: 119 L 119 L Sbjct: 161 L 161 >gi|323499747|ref|ZP_08104710.1| tRNA-specific adenosine deaminase [Vibrio sinaloensis DSM 21326] gi|323315193|gb|EGA68241.1| tRNA-specific adenosine deaminase [Vibrio sinaloensis DSM 21326] Length = 129 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/100 (46%), Positives = 61/100 (61%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G +L Sbjct: 22 WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 L + LYVTLEPC MCA A+ +RI R+ +GA + K Sbjct: 82 QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDDK 121 >gi|319787039|ref|YP_004146514.1| CMP/dCMP deaminase zinc-binding protein [Pseudoxanthomonas suwonensis 11-1] gi|317465551|gb|ADV27283.1| CMP/dCMP deaminase zinc-binding protein [Pseudoxanthomonas suwonensis 11-1] Length = 366 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/131 (38%), Positives = 76/131 (58%), Gaps = 5/131 (3%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 +EIPVGAV V ++I NRN D +AHAEI+A+R + LS L LYVTL Sbjct: 233 DEIPVGAVVVSAAGEVIGEGWNRNILDHDPSAHAEIMAMRQAGQALSNHRLVGATLYVTL 292 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP--EIYPGISEQRSR 138 EPC MCA A+ ARI R+ YGA++PK G G+ F + H+ ++ G+ + + Sbjct: 293 EPCAMCAMALVHARIARVVYGAADPKTGAC--GSVFDVIGDPRHNHRVQVQGGVLGEEAG 350 Query: 139 QIIQDFFKERR 149 + + ++F+ +R Sbjct: 351 RRLTNYFRAKR 361 >gi|32490887|ref|NP_871141.1| hypothetical protein WGLp138 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166093|dbj|BAC24284.1| yfhC [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 151 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 53/147 (36%), Positives = 77/147 (52%), Gaps = 11/147 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A A EIP+G+V +L + II N++ + D +AHAEILA+R + ++ Sbjct: 1 MYHALYLANKAKKFGEIPIGSVVILKDNIIGEGWNQSIKKNDPSAHAEILALRSAGKNIN 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT---LATC-- 122 L ++Y T+EPC MC AI AR+ RL +GA K F+T L C Sbjct: 61 NYRLLNTEIYTTIEPCIMCIGAIINARVSRLIFGARKTK------KINFFTKDLLNNCNL 114 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E+ ++II FF + R Sbjct: 115 NHKISLTEGILEENCKKIINKFFSKIR 141 >gi|126175184|ref|YP_001051333.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS155] gi|125998389|gb|ABN62464.1| tRNA-adenosine deaminase [Shewanella baltica OS155] Length = 175 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 72/143 (50%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A+ A E+PVGAV V + + I+ N + D +AHAEIL +R R++ Sbjct: 16 WMQVAMLMAEKAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLREAGRLV 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G +H Sbjct: 76 ENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHPAFNHQV 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + FFK RR Sbjct: 136 EVTSGVLADACSAQLSRFFKRRR 158 >gi|119714544|ref|YP_921509.1| tRNA-adenosine deaminase [Nocardioides sp. JS614] gi|119535205|gb|ABL79822.1| tRNA-adenosine deaminase [Nocardioides sp. JS614] Length = 143 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA+ A ++P+GAV + + ++R N D T HAE++A+R R Sbjct: 1 MRTALDEARAALASGDVPIGAVVLDPDGTPVARGRNVREADHDPTGHAEVVALRAAARAR 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPCTMCA A L+R+ R+ +GA +PK G + + +H P Sbjct: 61 GEWRLEGHTLVVTLEPCTMCAGAAVLSRVERIVFGAWDPKAGAVGSLWDVVRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + S +++DFF +R Sbjct: 121 EVISGVLAEESAGLLEDFFLTQR 143 >gi|145592768|ref|YP_001157065.1| CMP/dCMP deaminase, zinc-binding [Salinispora tropica CNB-440] gi|145302105|gb|ABP52687.1| tRNA-adenosine deaminase [Salinispora tropica CNB-440] Length = 153 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 1/126 (0%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++IPVGA+ + + G REL D TAHAE+LA+R L + L L VTL Sbjct: 28 DDIPVGALLLGPDGAELATGRNERELTGDPTAHAEVLALRRAAGRLGRWRLDGCTLVVTL 87 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ LAR+ + +GA PK G + +H PE+Y G+ E + + Sbjct: 88 EPCTMCAGALVLARVSTVVFGAWEPKTGAAGSLWDVLRDRRLNHRPEVYGGVLETETAAV 147 Query: 141 IQDFFK 146 ++ FF+ Sbjct: 148 LRAFFR 153 >gi|78184835|ref|YP_377270.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. CC9902] gi|78169129|gb|ABB26226.1| tRNA-adenosine deaminase [Synechococcus sp. CC9902] Length = 147 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M L+ AQ L E+PV AV + N + I NR +D HAE++A++ +L Sbjct: 1 MKVLLQRAQVNGLSGEVPVAAVVLDANGRAIGHGRNRRETKQDPLGHAELVALQQAALVL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L VTLEPC MCA A+ AR+ + +GA + K GG+ T + HH Sbjct: 61 GDWRFNQCCLIVTLEPCPMCAGALVQARMGTVVFGAHDRKRGGLGGTMNLATHTSAHHKM 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E + ++ +FK+RR Sbjct: 121 TVIGGVMEAEASTQLEQWFKQRR 143 >gi|311112334|ref|YP_003983556.1| tRNA-adenosine deaminase [Rothia dentocariosa ATCC 17931] gi|310943828|gb|ADP40122.1| tRNA-adenosine deaminase [Rothia dentocariosa ATCC 17931] Length = 176 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/146 (37%), Positives = 76/146 (52%), Gaps = 5/146 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL+E + AA EIP+GAV V +II N D T HAEI AIR + Sbjct: 28 WMRLALDEGKRAACAGEIPIGAVVVNAEGEIIGSGHNSREHDHDPTGHAEIHAIRQAAQH 87 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CH 123 L L E L VT+EPC MCA AI +ARI + GA K G + G+Q+ L Sbjct: 88 LKTWRLEECTLVVTVEPCLMCAGAILMARIPTVVMGAWEEKTGAV--GSQYDVLRDRRLG 145 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 ++Y G+ + ++++ FF+ RR Sbjct: 146 LDVQVYAGVLREECAELMRTFFEVRR 171 >gi|118496774|ref|YP_897824.1| zinc-binding protein [Francisella tularensis subsp. novicida U112] gi|118422680|gb|ABK89070.1| zinc-binding protein [Francisella novicida U112] Length = 153 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A ++A A E+P+GAV V + +II++ N+ L D TAHAEIL +R L Sbjct: 11 FMQKAYQQALLAYQAGEVPIGAVLVRDGQIIAQNFNQTIGLNDPTAHAEILVLRSAALKL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MC + AR+ L Y + + G + + +H+ Sbjct: 71 DNYRLVNTKLYVTLEPCIMCLGGLIQARVPELVYACDDSRVGAFSR-EKLHHNKNINHNL 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++++DFFK+RR Sbjct: 130 GVTAGVMADECGKLLKDFFKQRR 152 >gi|62262991|gb|AAX78118.1| unknown protein [synthetic construct] Length = 188 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A ++A A E+P+GAV V +++II + N+ L D TAHAEIL +R L Sbjct: 37 FMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLRSAALKL 96 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MC + AR+ L Y + + G + + +H+ Sbjct: 97 GNYRLVNTKLYVTLEPCIMCLGGLIQARVPELVYACDDSRVGAFSR-EKLHHNKNINHNL 155 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++++DFFK+RR Sbjct: 156 GVTAGVMADECSKLLKDFFKQRR 178 >gi|54022202|ref|YP_116444.1| putative cytidine/deoxycytidylate deaminase [Nocardia farcinica IFM 10152] gi|54013710|dbj|BAD55080.1| putative cytidine/deoxycytidylate deaminase [Nocardia farcinica IFM 10152] Length = 159 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 68/129 (52%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80 ++PVGAV + ++RA N D TAHAEILA+R ++ L L VTL Sbjct: 31 DVPVGAVVFDAQGRELARAANAREASGDPTAHAEILALRRAAQVHGDGWRLAGATLAVTL 90 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ LAR+ RL +GA PK G + + +H PE+ G+ E + Sbjct: 91 EPCTMCAGALVLARVDRLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLETECAAL 150 Query: 141 IQDFFKERR 149 + FF+ R Sbjct: 151 LDTFFRTHR 159 >gi|89257159|ref|YP_514521.1| zinc-binding domain-containing protein [Francisella tularensis subsp. holarctica LVS] gi|115315498|ref|YP_764221.1| cytosine/adenosine deaminase [Francisella tularensis subsp. holarctica OSU18] gi|134302708|ref|YP_001122676.1| cytidine and deoxycytidylate deaminase zinc-binding domain-containing protein [Francisella tularensis subsp. tularensis WY96-3418] gi|156503384|ref|YP_001429449.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|187932249|ref|YP_001892234.1| zinc-binding protein [Francisella tularensis subsp. mediasiatica FSC147] gi|290953357|ref|ZP_06557978.1| zinc-binding protein [Francisella tularensis subsp. holarctica URFT1] gi|295313404|ref|ZP_06804011.1| zinc-binding protein [Francisella tularensis subsp. holarctica URFT1] gi|89144990|emb|CAJ80350.1| Zinc-binding domain protein [Francisella tularensis subsp. holarctica LVS] gi|115130397|gb|ABI83584.1| probable cytosine/adenosine deaminase [Francisella tularensis subsp. holarctica OSU18] gi|134050485|gb|ABO47556.1| Cytidine and deoxycytidylate deaminase Zinc-binding domain protein [Francisella tularensis subsp. tularensis WY96-3418] gi|156253987|gb|ABU62493.1| cytidine/deoxycytidylate deaminase, zinc-binding domain protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|187713158|gb|ACD31455.1| zinc-binding protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 153 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A ++A A E+P+GAV V +++II + N+ L D TAHAEIL +R L Sbjct: 11 FMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLRSAALKL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MC + AR+ L Y + + G + + +H+ Sbjct: 71 GNYRLVNTKLYVTLEPCIMCLGGLIQARVPELVYACDDSRVGAFSR-EKLHHNKNINHNL 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ ++++DFFK+RR Sbjct: 130 GVTAGVMADECGKLLKDFFKQRR 152 >gi|296166870|ref|ZP_06849287.1| tRNA-specific adenosine deaminase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897747|gb|EFG77336.1| tRNA-specific adenosine deaminase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 152 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80 ++P+GAV V + ++RA N L D TAHAEILA+R +L L L VT+ Sbjct: 22 DVPIGAVVVGADGTELARAVNAREALGDPTAHAEILALRAAAGVLGDGWRLEGATLAVTV 81 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ LAR+ RL +GA PK G + + +H PE+ G+ + Sbjct: 82 EPCTMCAGALVLARVGRLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLAEECAAP 141 Query: 141 IQDFFKERR 149 ++ FF +R Sbjct: 142 LEAFFARQR 150 >gi|145221806|ref|YP_001132484.1| CMP/dCMP deaminase, zinc-binding [Mycobacterium gilvum PYR-GCK] gi|315446457|ref|YP_004079336.1| tRNA-adenosine deaminase [Mycobacterium sp. Spyr1] gi|145214292|gb|ABP43696.1| tRNA-adenosine deaminase [Mycobacterium gilvum PYR-GCK] gi|315264760|gb|ADU01502.1| tRNA-adenosine deaminase [Mycobacterium sp. Spyr1] Length = 149 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/145 (35%), Positives = 76/145 (52%), Gaps = 3/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + AL+ A+ A R+ +P+GAV ++RA N EL D TAHAEILA+R + Sbjct: 6 LIRAALDAARGAGPRD-VPIGAVVFDAEGTELARAANAREELGDPTAHAEILALRAAALV 64 Query: 66 LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L VT+EPCTMCA A+ +AR+ R+ +GA PK G + + H Sbjct: 65 HGDGWRLEGATLAVTVEPCTMCAGALVMARVARVVFGAWEPKTGAVGSLWDVVRDRRLTH 124 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 P++ G+ E +++FF +R Sbjct: 125 RPQVRGGVLEAECAAPLEEFFARQR 149 >gi|328943526|ref|ZP_08240991.1| tRNA-specific adenosine deaminase [Atopobium vaginae DSM 15829] gi|327491495|gb|EGF23269.1| tRNA-specific adenosine deaminase [Atopobium vaginae DSM 15829] Length = 237 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 81/146 (55%), Gaps = 6/146 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M CAL +AQ AAL E+P+GAV V NN I+S A N + + + HAE +A+ + L Sbjct: 92 YMHCALAQAQKAALEQEVPIGAVVVCNNTILSAAHNLRQHSHNPSDHAEFIAMLQAAKKL 151 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFYTLATCH 123 L +YVTLEPC MCA + ARI R +GA + K G + N + + L + Sbjct: 152 DSWHLERCCVYVTLEPCLMCAGLMLNARIARCVFGAYDQKAGACGSLYNVSNDFRL---N 208 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 HS E+ G+ S ++Q FFK +R Sbjct: 209 HSFELKGGVLADESANLLQQFFKHKR 234 >gi|319779703|ref|YP_004130616.1| tRNA-specific adenosine-34 deaminase [Taylorella equigenitalis MCE9] gi|317109727|gb|ADU92473.1| tRNA-specific adenosine-34 deaminase [Taylorella equigenitalis MCE9] Length = 162 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 3/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL+ A+ A E+PVGAV V N I+ + N+ D TAHAEI+A+R Sbjct: 11 FMQLALQNAEKAYKSGEVPVGAVLVGPNQDILGQGYNQVIGTSDSTAHAEIVALREANLS 70 Query: 66 LSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + LP ++VTLEPC MC A+ AR+ L G+ +PK G + HH Sbjct: 71 IQNYRLPSGCTMFVTLEPCIMCLGALIHARLEHLVIGSRDPKTGACGGRLSIHASDLNHH 130 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 +SE+ S+ I++DFF+E+R Sbjct: 131 MHTTVGVLSEECSK-ILKDFFREKR 154 >gi|124516363|gb|EAY57871.1| putative zinc-binding cytidine/deoxycytidylate deaminase [Leptospirillum rubarum] Length = 164 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/144 (34%), Positives = 73/144 (50%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M+ AL EA+ A +NEIP+GA+ V N ++ R N+ D TAHAEI+A+R Sbjct: 15 WMTEALSEAKTAMEKNEIPIGAILVDANGTVLGRGHNQRVGSTDPTAHAEIVALRTSGLH 74 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + LP LYVT+EPC MC A+ AR+ + +G P+ G + H Sbjct: 75 VKNYRLPGTTLYVTVEPCLMCFGALLEARVETVVFGIREPRWGVTGSLYDLQNDPRFPHR 134 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G+ ++Q FF+ RR Sbjct: 135 IRVREGVLSHACLDLLQSFFQSRR 158 >gi|15837614|ref|NP_298302.1| hypothetical protein XF1012 [Xylella fastidiosa 9a5c] gi|9105950|gb|AAF83822.1|AE003939_1 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 167 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 2/145 (1%) Query: 7 FMSCALEEAQNAALR-NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL A AA +EIPVGAV + ++ N N D +AHAEI+A+R Sbjct: 16 WMRHALTLAHRAATEFDEIPVGAVLISPEGTLLGEGWNYNITSHDPSAHAEIMALRAAGH 75 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L +P LYVTLEPC MCA AI ARI L Y A++PK G + +H Sbjct: 76 QLRNHRMPGCTLYVTLEPCLMCAMAIIHARIAHLIYAAADPKTGACGSTFDILNDPRHNH 135 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 +Y G+ + + + + ++F+ +R Sbjct: 136 HVHVYGGLLAEEASRRLTNYFRTKR 160 >gi|118468323|ref|YP_890544.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium smegmatis str. MC2 155] gi|118169610|gb|ABK70506.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium smegmatis str. MC2 155] Length = 149 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 3/141 (2%) Query: 11 ALEEAQNAALRNEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 ALE A+ A R+ +P+GAV + ++RA N D HAEI+A+R ++L Sbjct: 10 ALEAARTAGPRD-VPIGAVVYAADGTELARAVNVREAYGDPAGHAEIVAMRAAAKVLGDG 68 Query: 70 I-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 L L VT+EPCTMCA A+ LAR+ RL +GA PK G + + +H PE+ Sbjct: 69 WRLEGATLAVTVEPCTMCAGALVLARVSRLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEV 128 Query: 129 YPGISEQRSRQIIQDFFKERR 149 G+ ++++FF +R Sbjct: 129 IGGVLADECAALLEEFFARQR 149 >gi|308234244|ref|ZP_07664981.1| CMP/dCMP deaminase zinc-binding protein [Atopobium vaginae DSM 15829] Length = 216 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 81/146 (55%), Gaps = 6/146 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M CAL +AQ AAL E+P+GAV V NN I+S A N + + + HAE +A+ + L Sbjct: 71 YMHCALAQAQKAALEQEVPIGAVVVCNNTILSAAHNLRQHSHNPSDHAEFIAMLQAAKKL 130 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFYTLATCH 123 L +YVTLEPC MCA + ARI R +GA + K G + N + + L + Sbjct: 131 DSWHLERCCVYVTLEPCLMCAGLMLNARIARCVFGAYDQKAGACGSLYNVSNDFRL---N 187 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 HS E+ G+ S ++Q FFK +R Sbjct: 188 HSFELKGGVLADESANLLQQFFKHKR 213 >gi|288942407|ref|YP_003444647.1| CMP/dCMP deaminase protein [Allochromatium vinosum DSM 180] gi|288897779|gb|ADC63615.1| CMP/dCMP deaminase zinc-binding protein [Allochromatium vinosum DSM 180] Length = 166 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/102 (48%), Positives = 61/102 (59%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALE A+ AA E+PVGAV V +I+ NR D +AHAEI A+R R + Sbjct: 12 WMRHALELARCAAEEGEVPVGAVLVREGEILGEGWNRPIIRHDPSAHAEIQALRDAGRRV 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 LP LYVTLEPC MCA AI AR+ ++ YGA +PK G Sbjct: 72 GNYRLPGSILYVTLEPCVMCAGAIVHARVAQVIYGAPDPKAG 113 >gi|300742404|ref|ZP_07072425.1| cytidine/deoxycytidylate deaminase family protein [Rothia dentocariosa M567] gi|300381589|gb|EFJ78151.1| cytidine/deoxycytidylate deaminase family protein [Rothia dentocariosa M567] Length = 176 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/146 (37%), Positives = 75/146 (51%), Gaps = 5/146 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL+E + AA EIP+GAV V +II N D T HAEI AIR + Sbjct: 28 WMRLALDEGKRAACAGEIPIGAVVVNAEGEIIGSGHNSREHDHDPTGHAEIHAIRQAAQH 87 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CH 123 L L E L VT+EPC MCA AI +ARI + GA K G + G+Q+ L Sbjct: 88 LKTWRLEECTLVVTVEPCLMCAGAILMARIPTVVMGAWEEKTGAV--GSQYDVLRDRRLG 145 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 ++Y G+ + +++ FF+ RR Sbjct: 146 LDVQVYAGVLREECAGLMRTFFEARR 171 >gi|120406536|ref|YP_956365.1| CMP/dCMP deaminase [Mycobacterium vanbaalenii PYR-1] gi|119959354|gb|ABM16359.1| tRNA-adenosine deaminase [Mycobacterium vanbaalenii PYR-1] Length = 166 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80 ++P+GAV + + ++RA N E D TAHAEILA+R R L L L VT+ Sbjct: 38 DVPIGAVVFAPDGRELARAANAREEFGDPTAHAEILALRAAARELGDGWRLEGATLAVTV 97 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ +AR+ R+ +GA PK G + + H P++ G+ E Sbjct: 98 EPCTMCAGALVMARVARVVFGAWEPKTGAVGSLWDVVRDRRLTHRPQVRGGVLEAECAAP 157 Query: 141 IQDFFKERR 149 +++FF +R Sbjct: 158 LEEFFAGQR 166 >gi|312200616|ref|YP_004020677.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c] gi|311231952|gb|ADP84807.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c] Length = 198 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++P+GAV + + + G+ RE+ D T HAEI+A+R + + L L VTL Sbjct: 60 GDVPIGAVVIGADGTVLGRGHNIREVAADPTGHAEIVALRAAATAVGEWRLTGATLVVTL 119 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ LAR+ RL YGA + K G + + +H PE+ G++ + Sbjct: 120 EPCTMCAGALVLARVDRLVYGAIDEKAGAVGSLWDVVRDRRLNHRPEVITGVAAPDCTAL 179 Query: 141 IQDFFKERR 149 + FF RR Sbjct: 180 LDTFFASRR 188 >gi|294791140|ref|ZP_06756297.1| tRNA(Ile)-lysidine synthase [Scardovia inopinata F0304] gi|294457611|gb|EFG25965.1| tRNA(Ile)-lysidine synthase [Scardovia inopinata F0304] Length = 152 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR--ELKDVTAHAEILAIRMGCRI 65 M ALE A+ +A +EIPVGAV VLN++ A RN E D +HAEI +R R+ Sbjct: 9 MGVALENARKSADFDEIPVGAV-VLNSEGAVLAAERNHREEKADPFSHAEIEVMREAARV 67 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L VT+EPC MCA AI A + R+ +GA + K G + + Sbjct: 68 RESWNFEDCTLVVTMEPCPMCAGAIVSAHMGRVVFGAWDEKMGALGSVWDIARDPHVGFR 127 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE++ G+ +I+++FF+E+R Sbjct: 128 PEVFGGVRADECAEILREFFEEKR 151 >gi|226941431|ref|YP_002796505.1| CumB [Laribacter hongkongensis HLHK9] gi|226716358|gb|ACO75496.1| CumB [Laribacter hongkongensis HLHK9] Length = 171 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/131 (40%), Positives = 68/131 (51%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74 AQ AA E+PVGA+ VL K+I R N D TAHAEI A+R LP Sbjct: 8 AQEAAAAGEVPVGALVVLEGKVIGRGANAPIGRHDPTAHAEIAALRAAAERAGNYRLPGA 67 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134 +LYVTLEPC MCA AI ARI R+ +GAS+ K G + + +H E+ G+ Sbjct: 68 ELYVTLEPCAMCAGAIQHARIARVVFGASDAKTGAAGSVVDLFAEPRLNHHAEVCGGLLA 127 Query: 135 QRSRQIIQDFF 145 ++ FF Sbjct: 128 DECAAVLSGFF 138 >gi|225013101|ref|ZP_03703515.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-2A] gi|225002759|gb|EEG40741.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-2A] Length = 154 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 80/143 (55%), Gaps = 6/143 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+ AA +E+PVGAV V+ +II+RA N L DVTAHAE+ AI L Sbjct: 17 FMKQALAEAEKAAFADEVPVGAVVVVEQRIIARAHNLTERLHDVTAHAEMQAITAAANYL 76 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + + L LYVTLEPC MCA A+ ++ R+ +GAS+ K G + H Sbjct: 77 NGKYLVGCTLYVTLEPCVMCAGALVWSQFDRVVFGASDSKRGFQQANLDL------HPKT 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + ++ ++ FF ++R Sbjct: 131 ILSGGVLAEEAKALLDAFFAKKR 153 >gi|301096603|ref|XP_002897398.1| tRNA-specific adenosine deaminase, putative [Phytophthora infestans T30-4] gi|262107089|gb|EEY65141.1| tRNA-specific adenosine deaminase, putative [Phytophthora infestans T30-4] Length = 130 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 48/108 (44%), Positives = 66/108 (61%), Gaps = 7/108 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI-----RM 61 FM AL E + A +R E+PVG V V +II+ A NR EL + T HAEI+AI + Sbjct: 9 FMREALLEGERALIRAEVPVGCVFVHKGEIIASASNRVNELCNATMHAEIVAIEAIAAKY 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 G + + E+L + LYVT EPC MCA A++ I+R+Y+G N + GG Sbjct: 69 GDK--ACEVLADCTLYVTCEPCIMCAGALAHVSIKRVYFGCHNDRFGG 114 >gi|297623312|ref|YP_003704746.1| tRNA(Ile)-lysidine synthetase [Truepera radiovictrix DSM 17093] gi|297164492|gb|ADI14203.1| tRNA(Ile)-lysidine synthetase [Truepera radiovictrix DSM 17093] Length = 556 Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 52/143 (36%), Positives = 73/143 (51%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA+ AA R E+PVGAV V ++ R N RE D +AHAE+ AIR L Sbjct: 406 WMRLALNEARRAAERGELPVGAVVVRGGAVLGRGHNTTRESGDPSAHAELHAIRQAAAAL 465 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L+VTLEPC MC A+ A + R+ YGA+N + G + G + Sbjct: 466 GDWRLAGCTLFVTLEPCPMCFGALLSAHLPRVVYGATNAREGAL-GGVADLQQHPWKRTV 524 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + ++ FF+ RR Sbjct: 525 AVRGGVLAAEAGALLTAFFRARR 547 >gi|72160431|ref|YP_288088.1| tRNA-adenosine deaminase [Thermobifida fusca YX] gi|71914163|gb|AAZ54065.1| tRNA-adenosine deaminase [Thermobifida fusca YX] Length = 150 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 61/149 (40%), Positives = 81/149 (54%), Gaps = 8/149 (5%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66 M ALEEA+ + ++PVGAV + + ++ AG+ RE D TAHAE+LA+R R L Sbjct: 1 MRRALEEAEKTSSSGDVPVGAVVLDPDGVVIGAGHNEREATGDPTAHAEVLALRAAARRL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA AI LARI RL YGA + + G + + +H P Sbjct: 61 GSWRLSGCTLAVTLEPCTMCAGAIVLARIERLIYGARDERAGAVGSLWDVVRDRRLNHRP 120 Query: 127 EIYPG------ISEQRSRQIIQDFFKERR 149 E+ P +S SR ++ DFF R Sbjct: 121 EVIPPDLVDPELSAACSR-LLTDFFARHR 148 >gi|260436012|ref|ZP_05789982.1| tRNA-adenosine deaminase [Synechococcus sp. WH 8109] gi|260413886|gb|EEX07182.1| tRNA-adenosine deaminase [Synechococcus sp. WH 8109] Length = 167 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 3/141 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M L+ A+ A E+PV AV +L+ + I NR + +D HAE++A++ Sbjct: 20 WMDVLLQRAEEAGAEGEVPVAAV-ILDGQGRAIGHGRNRRQNDRDPLGHAELVALQQAAI 78 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L VTLEPC MCA A+ AR+ + + AS+PK GG+ T A+ HH Sbjct: 79 VQDDWRFNNCTLIVTLEPCPMCAGALVQARMGTVIFAASDPKRGGLGGSLDLSTHASAHH 138 Query: 125 SPEIYPGISEQRSRQIIQDFF 145 ++ G+ E +R+ ++ +F Sbjct: 139 HMKVIEGVREPEAREQLESWF 159 >gi|319760657|ref|YP_004124595.1| tRNA-specific adenosine deaminase [Candidatus Blochmannia vafer str. BVAF] gi|318039371|gb|ADV33921.1| tRNA-specific adenosine deaminase [Candidatus Blochmannia vafer str. BVAF] Length = 155 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 53/146 (36%), Positives = 74/146 (50%), Gaps = 2/146 (1%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++M A+ A AAL + +GAV V + +++ N D +AHAEI+A+R+G Sbjct: 10 IWMRYAITLASVAALSGNVAIGAVLVYDGRLVGYGYNAALIFHDPSAHAEIIALRVGGNY 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE--NGTQFYTLATCH 123 L L LYVT+EPC MC AI ARI RL GA K I F A + Sbjct: 70 LGNYRLLNTTLYVTMEPCIMCVGAIINARIHRLVCGAIGNKIRWINLLRINYFIDHAMIN 129 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H +I G+ + + I+DFFK +R Sbjct: 130 HQCDIKTGVLSEVCSKQIRDFFKYKR 155 >gi|288919170|ref|ZP_06413508.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EUN1f] gi|288349417|gb|EFC83656.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EUN1f] Length = 156 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 44/115 (38%), Positives = 60/115 (52%) Query: 35 KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 +++ R N D TAHAE++A+R L L L VTLEPCTMCA A+ LAR Sbjct: 29 QVLGRGHNAREATGDPTAHAEVIALRHAAAELGAWRLGGTTLVVTLEPCTMCAGALVLAR 88 Query: 95 IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + R+ YGA +PK G + + +H PE+ G+ EQ + FF RR Sbjct: 89 VDRVVYGAVDPKAGAVGSLWDVVRDRRLNHRPEVISGVREQECSDQLAAFFDGRR 143 >gi|308491803|ref|XP_003108092.1| hypothetical protein CRE_10287 [Caenorhabditis remanei] gi|308248940|gb|EFO92892.1| hypothetical protein CRE_10287 [Caenorhabditis remanei] Length = 171 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/147 (33%), Positives = 81/147 (55%), Gaps = 8/147 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ CA AQ A +E+PVG V V++ K I + NR E D T HAE++A+ + Sbjct: 12 FLECAFNLAQEALDGDEVPVGCVFVVDGKEIGKGRNRVNETGDPTRHAEMVAVTEMWKKY 71 Query: 67 SQE---ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN--GTQFYTLAT 121 +E L LYV+LEPC MC++A+ IR++ YGA NP+ GG+ + + Y + Sbjct: 72 GEECKDFLRRAVLYVSLEPCIMCSSAMYQLGIRKMVYGAENPRFGGVRSVGNAEKYRM-- 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148 + +I + RS +++ F++++ Sbjct: 130 -EDNIQIVSNVWSDRSVAMLKSFYEKQ 155 >gi|310657417|ref|YP_003935138.1| yaaj [Clostridium sticklandii DSM 519] gi|308824195|emb|CBH20233.1| YaaJ [Clostridium sticklandii] Length = 157 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 47/108 (43%), Positives = 63/108 (58%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM AL+EA + NE+P+G V V + +II+RA N + KD HAE++AI+ Sbjct: 1 MMNKEFFMREALKEALKSYSINEVPIGCVIVKDGEIIARAHNNREQNKDPLGHAELIAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 + L L D+YVTLEPC MC+ AI +RI LY GA + K G Sbjct: 61 NAAKHLGGWRLVGCDMYVTLEPCIMCSGAIMDSRIENLYIGAIDDKRG 108 >gi|146321900|ref|YP_001201611.1| cytosine/adenosine deaminase [Streptococcus suis 98HAH33] gi|145692706|gb|ABP93211.1| Cytosine/adenosine deaminase [Streptococcus suis 98HAH33] Length = 141 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 45/119 (37%), Positives = 65/119 (54%) Query: 31 VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90 V + +II R N EL HAE++AI+ + L + L+VT+EPC MC+ AI Sbjct: 3 VKDGQIIGRGHNAREELNQAIMHAEVMAIQEANNVEGNWRLLDSTLFVTIEPCVMCSGAI 62 Query: 91 SLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 LARI ++ YGA+N K G + T +H ++ GI E I+QDFF++RR Sbjct: 63 GLARIPQVIYGATNKKFGAAGSLYDILTDERLNHRVKVETGILEAECANIMQDFFRQRR 121 >gi|312078286|ref|XP_003141672.1| tRNA-specific adenosine deaminase 2 [Loa loa] gi|307763164|gb|EFO22398.1| tRNA-specific adenosine deaminase 2 [Loa loa] Length = 205 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 87/149 (58%), Gaps = 9/149 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F++ A E A +A L NE+PVG V V + ++ N K+ T HAE++A+ M + Sbjct: 27 FLNRAFEIAVDAVLNNEVPVGCVFVFEGQEVAFGRNDVNRTKNPTYHAEMVALEMMKQWC 86 Query: 67 S------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN-GTQFYTL 119 ++++ LYVTLEPC MCA+A+ R++++ YGA+N + GG+ + GT+ Sbjct: 87 MDNGHELEDVMRRSTLYVTLEPCIMCASALYHLRLKKILYGAANERFGGLLSVGTR--EK 144 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148 H EI P +S R+ +++++F++++ Sbjct: 145 YGAEHFIEILPNLSVDRAVKLLKEFYEKQ 173 >gi|148239680|ref|YP_001225067.1| tRNA-specific adenosine deaminase [Synechococcus sp. WH 7803] gi|147848219|emb|CAK23770.1| tRNA-specific adenosine deaminase [Synechococcus sp. WH 7803] Length = 175 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M L A+ EIPV AV + + I NR L D HAE++A+R G + Sbjct: 18 WMQRLLNRAERVGATGEIPVAAVLLDEAGRCIGHGSNRRECLNDPLGHAELMALRQGAWL 77 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L VTLEPC MCA A+ AR+ ++ + A + K GG+ + + HH Sbjct: 78 LGDWRMNHCTLLVTLEPCPMCAGALVQARVGQVIFAARDSKRGGLGSTINLAEHQSAHHH 137 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G+ E+++ ++ +F++RR Sbjct: 138 MRVVSGVLEEQASALLAGWFRQRR 161 >gi|226303819|ref|YP_002763777.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis PR4] gi|226182934|dbj|BAH31038.1| putative tRNA-specific adenosine deaminase [Rhodococcus erythropolis PR4] Length = 153 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 51/137 (37%), Positives = 75/137 (54%), Gaps = 2/137 (1%) Query: 15 AQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LP 72 A +A ++PVGAV + + ++RA N D TAHAEILA+R +I L Sbjct: 16 AARSASDADVPVGAVVFDADGVEVARAANAREAASDPTAHAEILALRAAAKIYGDGWRLE 75 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132 L VTLEPCTMCA A+ LAR+ R+ +GA PK G + + + P++ G+ Sbjct: 76 GATLAVTLEPCTMCAGALVLARVSRVVFGAWEPKTGAVGSLWDVVRDKRLTYRPQVRGGV 135 Query: 133 SEQRSRQIIQDFFKERR 149 E +++DFF+E+R Sbjct: 136 LEDECAGLLEDFFREQR 152 >gi|332528366|ref|ZP_08404366.1| CMP/dCMP deaminase [Hylemonella gracilis ATCC 19624] gi|332042237|gb|EGI78563.1| CMP/dCMP deaminase [Hylemonella gracilis ATCC 19624] Length = 375 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 71/128 (55%), Gaps = 6/128 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN------KIISRAGNRNRELKDVTAHAEILAIR 60 +M AL++A AA E+PVGAV V + ++++ A N D TAHAE+ A+R Sbjct: 7 YMRMALDQAYRAAQAGEVPVGAVLVHQDPHGGADRVLATAHNTPIADHDPTAHAEMQALR 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L L + LYVTLEPC MCA A+ AR++R+ YGA++PK G + + Sbjct: 67 AAGSVLGNYRLDDCTLYVTLEPCPMCAGAMLHARLKRVVYGAADPKTGAAGSVLDLFAHR 126 Query: 121 TCHHSPEI 128 +H ++ Sbjct: 127 QLNHQTQV 134 >gi|262276797|ref|ZP_06054590.1| tRNA-specific adenosine deaminase [alpha proteobacterium HIMB114] gi|262223900|gb|EEY74359.1| tRNA-specific adenosine deaminase [alpha proteobacterium HIMB114] Length = 158 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 74/133 (55%), Gaps = 2/133 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 N +++ A + E+P+ A+ NN+I+S++ N+N + + +HAEI++I Sbjct: 12 NYIFDILYQQSIKAQKKKEVPISALIFDPKNNRIVSKSHNQNIQDYNPCSHAEIISIIKA 71 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C L++ L +DLY +LEPC MC++ I ++IRR+Y+ + K G + N + Sbjct: 72 CNKLNKNRLDGMDLYCSLEPCLMCSSVIFQSKIRRVYFATDDKKNGALINNYKLGLKKNL 131 Query: 123 HHSPEIYPGISEQ 135 +H +IY G E+ Sbjct: 132 NHRIDIYYGFQEE 144 >gi|293605714|ref|ZP_06688091.1| cytidine/deoxycytidylate deaminase [Achromobacter piechaudii ATCC 43553] gi|292815893|gb|EFF74997.1| cytidine/deoxycytidylate deaminase [Achromobacter piechaudii ATCC 43553] Length = 169 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 49/127 (38%), Positives = 71/127 (55%), Gaps = 1/127 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++ AL+EAQ A E+PVGA+ V +I+ R NR D TAHAEI+A+R R Sbjct: 20 YIELALQEAQAAYEIGEVPVGALVVSAQGEILGRGYNRTIIDHDPTAHAEIVALRNAARR 79 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L LP + +YVTLEPC MC A+ AR+ R+ +GA +PK G + ++ +H Sbjct: 80 LENYRLPGITVYVTLEPCVMCIGAMLHARLARVVFGAYDPKTGACGSVLDVGSVPKLNHH 139 Query: 126 PEIYPGI 132 + G+ Sbjct: 140 TSVTGGV 146 >gi|28198227|ref|NP_778541.1| cytosine deaminase [Xylella fastidiosa Temecula1] gi|170729545|ref|YP_001774978.1| cytosine deaminase [Xylella fastidiosa M12] gi|182680863|ref|YP_001829023.1| CMP/dCMP deaminase zinc-binding [Xylella fastidiosa M23] gi|28056297|gb|AAO28190.1| cytosine deaminase [Xylella fastidiosa Temecula1] gi|167964338|gb|ACA11348.1| cytosine deaminase [Xylella fastidiosa M12] gi|182630973|gb|ACB91749.1| CMP/dCMP deaminase zinc-binding [Xylella fastidiosa M23] Length = 165 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 2/145 (1%) Query: 7 FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL A AA +EIPVGAV + ++ N N D +AHAEI+A+R Sbjct: 14 WMRHALTLAHRAATEFDEIPVGAVLISPEGTLLGEGCNYNITSHDPSAHAEIMALRAAGH 73 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L +P LYVTLEPC MCA AI ARI L Y A++PK G + +H Sbjct: 74 QLRNHRMPGCTLYVTLEPCLMCAMAIIHARIAHLIYAAADPKTGACGSTFDILNDPRHNH 133 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 +Y G+ + + + + ++F+ +R Sbjct: 134 HVHVYGGLLAEEASRRLTNYFRTKR 158 >gi|260654860|ref|ZP_05860348.1| tRNA-specific adenosine deaminase [Jonquetella anthropi E3_33 E1] gi|260630362|gb|EEX48556.1| tRNA-specific adenosine deaminase [Jonquetella anthropi E3_33 E1] Length = 166 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 52/140 (37%), Positives = 70/140 (50%), Gaps = 1/140 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL EA+ A E+PVGAV V II R N L D TAHAEI+A+R + Sbjct: 1 MMEQALCEARRAFAGGEVPVGAVVVDEKGNIIGRGYNLRAALHDPTAHAEIVALREAAQA 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L L+VTLEPC MCA A+ ARI R+ +G + + G + +H Sbjct: 61 LGGWNLSGCSLFVTLEPCPMCAGALVQARIARVVFGCRDERAGACGSLYSILRDGRLNHR 120 Query: 126 PEIYPGISEQRSRQIIQDFF 145 ++ G+ R ++Q FF Sbjct: 121 CDVAEGLMADECRSLLQSFF 140 >gi|255326091|ref|ZP_05367178.1| tRNA-specific adenosine deaminase [Rothia mucilaginosa ATCC 25296] gi|255296802|gb|EET76132.1| tRNA-specific adenosine deaminase [Rothia mucilaginosa ATCC 25296] Length = 158 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 50/130 (38%), Positives = 64/130 (49%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R EIP+GAV V II AGN D +AHAE+ AIR Q L L VT Sbjct: 28 RGEIPIGAVVVDEQGAIIGSAGNTREREHDPSAHAEVNAIRQAAAHRGQWRLDGCTLVVT 87 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 +EPC MCA I +R+ + +GA K G + +PE+Y G+ Q Sbjct: 88 VEPCLMCAGTILASRVSTVVFGAWEEKTGAAGSRYDVLRDGRVAPAPEVYAGVRADECAQ 147 Query: 140 IIQDFFKERR 149 ++ DFFKERR Sbjct: 148 LMVDFFKERR 157 >gi|30248454|ref|NP_840524.1| cytidine and deoxycytidylate deaminase zinc-binding region [Nitrosomonas europaea ATCC 19718] gi|30138340|emb|CAD84348.1| Cytidine and deoxycytidylate deaminase zinc-binding region [Nitrosomonas europaea ATCC 19718] Length = 167 Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 72/143 (50%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+ A+ A E+PVGAV V ++I+ N D TAHAEI A+R + Sbjct: 17 FMRQALDLARVAGAAGEVPVGAVMVRESRIVGCGHNCPVTTVDPTAHAEIRALRDAASRV 76 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP LYVTLEPC MC A+ ARI RL Y A++PK G + +H Sbjct: 77 GNYRLPGCTLYVTLEPCVMCIGAMFHARITRLVYAANDPKTGVCGSLLDLPADTRLNHHL 136 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + +++ FF +R Sbjct: 137 MVSQGVLADEAGTLLKQFFIAKR 159 >gi|302379537|ref|ZP_07268022.1| cytidine and deoxycytidylate deaminase zinc-binding region [Finegoldia magna ACS-171-V-Col3] gi|302312444|gb|EFK94440.1| cytidine and deoxycytidylate deaminase zinc-binding region [Finegoldia magna ACS-171-V-Col3] Length = 155 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E+A+ A +E+PVG V V N +II++A N + T HAE+ AI +++ Sbjct: 8 FMIKAIEQAKIAFDLDEVPVGCVIVKNGEIIAQAYNSVETDNNATMHAELKAINQATKVI 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + +YVTLEPC MC A+ +RI ++ +GA + K G + +H Sbjct: 68 GNFRLDDCTMYVTLEPCVMCTGALVYSRIPKVVFGAFDKKRGACGSLISLNDYEGLNHKI 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ I E+ +++Q FF+ R Sbjct: 128 EV-KSIMEKECVELMQSFFRRIR 149 >gi|238026935|ref|YP_002911166.1| CMP/dCMP deaminase, zinc-binding [Burkholderia glumae BGR1] gi|237876129|gb|ACR28462.1| CMP/dCMP deaminase, zinc-binding [Burkholderia glumae BGR1] Length = 202 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 48/102 (47%), Positives = 61/102 (59%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL A A E+PVGAV V +++I+R N D +AHAE+ A+R L Sbjct: 35 FMRLALAAADAARAAGEVPVGAVLVRGDQVIARGFNHPISGHDPSAHAEMAALREAAHTL 94 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 LP +LYVTLEPC MC+ AI ARI R+ YGA++PK G Sbjct: 95 GNYRLPGCELYVTLEPCLMCSGAIMHARIARVVYGAADPKTG 136 >gi|325092201|gb|EGC45511.1| tRNA specific adenosine deaminase [Ajellomyces capsulatus H88] Length = 197 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 6/129 (4%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +K FM AL+ + A E PVG V V N+++I N + + T HAE LAI Sbjct: 15 QKHEYFMKKALDMGEEALASGETPVGCVLVHNDEVIGSGMNDTNKSMNGTRHAEFLAIEE 74 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + I E DLYVT+EPC MCA+A+ +IR +Y+G +N + GG + Sbjct: 75 VLRNYPRSIFRETDLYVTVEPCIMCASALRQYQIRHVYFGCANERFGGTGG------VLN 128 Query: 122 CHHSPEIYP 130 H P I P Sbjct: 129 LHSDPGIDP 137 >gi|222110787|ref|YP_002553051.1| cmp/dcmp deaminase zinc-binding [Acidovorax ebreus TPSY] gi|221730231|gb|ACM33051.1| CMP/dCMP deaminase zinc-binding [Acidovorax ebreus TPSY] Length = 361 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 67/126 (53%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V + ++I+ N D TAHAE+ A+R G LS L LYVTLE Sbjct: 24 GEVPVGAVLVRDGQVIATGRNAPIAGHDPTAHAEMAALRAGAAQLSNYRLDGCTLYVTLE 83 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC+ A+ AR+ R+ YGA++ K G + + +H + G+ ++ Sbjct: 84 PCAMCSGAMLHARLPRVVYGAADAKTGAAGSVVNLFAEPRLNHQTAVQGGVLADECGALL 143 Query: 142 QDFFKE 147 DFF++ Sbjct: 144 SDFFRD 149 >gi|121594624|ref|YP_986520.1| CMP/dCMP deaminase [Acidovorax sp. JS42] gi|120606704|gb|ABM42444.1| CMP/dCMP deaminase, zinc-binding protein [Acidovorax sp. JS42] Length = 361 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 67/126 (53%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V + ++I+ N D TAHAE+ A+R G LS L LYVTLE Sbjct: 24 GEVPVGAVLVRDGQVIATGRNAPIAGHDPTAHAEMAALRAGAAQLSNYRLDGCTLYVTLE 83 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC+ A+ AR+ R+ YGA++ K G + + +H + G+ ++ Sbjct: 84 PCAMCSGAMLHARLPRVVYGAADAKTGAAGSVVNLFAEPRLNHQTAVQGGVLADECGALL 143 Query: 142 QDFFKE 147 DFF++ Sbjct: 144 SDFFRD 149 >gi|71902073|ref|ZP_00684112.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella fastidiosa Ann-1] gi|71728165|gb|EAO30357.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella fastidiosa Ann-1] Length = 203 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 2/145 (1%) Query: 7 FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL A AA +EIPVGAV + ++ N N D +AHAEI+A+R Sbjct: 52 WMRHALTLAHRAATEFDEIPVGAVLISPEGTLLGEGCNYNITSHDPSAHAEIMALRAAGH 111 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L +P LYVTLEPC MCA AI ARI L Y A++PK G + +H Sbjct: 112 QLRNHRMPGCTLYVTLEPCLMCAMAIIHARIAHLIYAATDPKTGACGSTFDILNDPRHNH 171 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 +Y G+ + + + + ++F+ +R Sbjct: 172 HVHVYGGLLAEEASRRLTNYFRTKR 196 >gi|225681358|gb|EEH19642.1| tRNA-specific adenosine deaminase subunit TAD2 [Paracoccidioides brasiliensis Pb03] Length = 197 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 72/143 (50%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K FM AL+ + A E PVG V V N +II N + + T HAE LA+ Sbjct: 16 KHEYFMRKALDMGEEALASGETPVGCVLVHNEEIIGSGMNDTNKSMNGTRHAEFLAVEEV 75 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R + I E DLYVT+EPC MCA+A+ RIR +Y+G +N + GG ++ Sbjct: 76 LRSHPRSIFHETDLYVTVEPCIMCASALRQYRIRHVYFGCANERFGGTGGVLNLHSDPGI 135 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 E+ G+ + + +++ F+ Sbjct: 136 DPPYELTGGLFRKEAIMLLRRFY 158 >gi|182437330|ref|YP_001825049.1| putative deaminase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326777951|ref|ZP_08237216.1| CMP/dCMP deaminase zinc-binding [Streptomyces cf. griseus XylebKG-1] gi|178465846|dbj|BAG20366.1| putative deaminase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326658284|gb|EGE43130.1| CMP/dCMP deaminase zinc-binding [Streptomyces cf. griseus XylebKG-1] Length = 142 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 52/140 (37%), Positives = 72/140 (51%), Gaps = 1/140 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA AA ++PVGAV + + ++ A N D TAHAEILA+R Sbjct: 1 MRRALAEAGRAASAGDVPVGAVVLGPDGTGLATAHNEREATGDPTAHAEILALRRAAEAH 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPCTMCA A+ +RI R+ YGA + K G + +H P Sbjct: 61 GEWRLTGCTLVVTLEPCTMCAGALVQSRIARVVYGARDEKAGAAGSLWDVVRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFK 146 E+ G+ E+ + + FF+ Sbjct: 121 EVIAGVLERECAEQLTAFFR 140 >gi|254568360|ref|XP_002491290.1| Subunit of tRNA-specific adenosine-34 deaminase [Pichia pastoris GS115] gi|238031087|emb|CAY69010.1| Subunit of tRNA-specific adenosine-34 deaminase [Pichia pastoris GS115] gi|328352193|emb|CCA38592.1| hypothetical protein PP7435_Chr2-0910 [Pichia pastoris CBS 7435] Length = 220 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 24/154 (15%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+ AQ A E+P+G + V NKII++ N+ HAE+ AI I+ Sbjct: 9 FMKKALDAAQIALDELEVPIGCIFVYKNKIIAQGSNKTNATSCGINHAEMEAID---EII 65 Query: 67 SQ-----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 ++ EILP DLYVT+EPC MCA+A+ IRR+++G +N + GG NG ++ T Sbjct: 66 AKYPNYKEILPFADLYVTVEPCIMCASALRQLGIRRVFFGCANDRFGG--NG----SVLT 119 Query: 122 CHHSP----------EIYPGISEQRSRQIIQDFF 145 H +YPGI + + +++ F+ Sbjct: 120 IHSDKLNNKLDSSIYPVYPGIYAKEAVTLLRKFY 153 >gi|15828339|ref|NP_302602.1| cytidine/deoxycytidylate deaminase [Mycobacterium leprae TN] gi|221230816|ref|YP_002504232.1| putative cytidine/deoxycytidylate deaminase [Mycobacterium leprae Br4923] gi|13094032|emb|CAC31991.1| possible cytidine/deoxycytidylate deaminase [Mycobacterium leprae] gi|219933923|emb|CAR72573.1| possible cytidine/deoxycytidylate deaminase [Mycobacterium leprae Br4923] Length = 171 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 53/145 (36%), Positives = 74/145 (51%), Gaps = 3/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + AL A A R+ +P+GAV + + ++RA N + D TAHAEILA+R Sbjct: 20 LIRAALTVATTAGSRD-VPIGAVVLGADGNELARAVNAREAIGDPTAHAEILAMRAAAGT 78 Query: 66 LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L L VT+EPCTMCA A+ LARI RL +GA PK G + + +H Sbjct: 79 LGNGWRLEGTTLAVTVEPCTMCAGALVLARIERLVFGAWQPKTGAVGSLWDVVRDHRLNH 138 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 P + G+ Q ++ FF +R Sbjct: 139 RPAVRGGVLAQECTAPLEAFFAHQR 163 >gi|328954698|ref|YP_004372031.1| tRNA-adenosine deaminase [Coriobacterium glomerans PW2] gi|328455022|gb|AEB06216.1| tRNA-adenosine deaminase [Coriobacterium glomerans PW2] Length = 165 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 73/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ AA E+P+GA V I+RA NR + +AHAE +A+ +L Sbjct: 18 FMREALAQARMAAELGEVPIGAAVVYEGDCIARAHNRRELDGNPSAHAEFVAMLKASAVL 77 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L +YVT+EPC MCA + ARI R +GAS+PKGG + +H+ Sbjct: 78 GRWRLTGCTVYVTVEPCLMCAGLMVNARIDRCVFGASDPKGGALGTLFDVSRDPRLNHAF 137 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + + + ++ FF + R Sbjct: 138 GVTRDVEREECSDLLTTFFADLR 160 >gi|332704280|ref|ZP_08424368.1| CMP/dCMP deaminase, zinc-binding protein [Desulfovibrio africanus str. Walvis Bay] gi|332554429|gb|EGJ51473.1| CMP/dCMP deaminase, zinc-binding protein [Desulfovibrio africanus str. Walvis Bay] Length = 174 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 74/144 (51%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL +A A E+PVGA A+L+ ++++A N L D TAHAE+L +R G Sbjct: 23 MDVALRQAHEAGSMGEVPVGA-ALLSAEGSLLAQAHNAPLSLNDPTAHAEMLCLRQGAST 81 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L L VTLEPC MC A+ ARI L GA +PK G + + + L +H Sbjct: 82 LGNYRLTGCILAVTLEPCIMCLGALVHARIAGLVIGARDPKAGAVLSRLKGLRLPFLNHQ 141 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI + +++ FF RR Sbjct: 142 FWVLEGIMAEDCGKLLSSFFLRRR 165 >gi|71892310|ref|YP_278044.1| tRNA-specific adenosine deaminase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796416|gb|AAZ41167.1| tRNA-specific adenosine deaminase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 155 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 77/147 (52%), Gaps = 6/147 (4%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++M A+ A +A + EI VGAV + N K+IS N + D +AHAEI+A+R G ++ Sbjct: 10 IWMRHAIALAAHAEIIGEISVGAVLIQNGKLISYGWNSSIICHDPSAHAEIVALRTGGKV 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG---GGIENGTQFYTLATC 122 L L LYVTLEPC MC AI AR+ RL GA N K ++N + Sbjct: 70 LGNYRLLGTTLYVTLEPCMMCIGAIIHARVYRLVCGAKNSKTEQRSWLKNTLRH---PMN 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ + FFK +R Sbjct: 127 NHHVFLTTGVLEKECAYQLNKFFKRQR 153 >gi|311897119|dbj|BAJ29527.1| putative deaminase [Kitasatospora setae KM-6054] Length = 179 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+EEA A ++PVGA + + ++ R N + D T HAE++AIR + Sbjct: 37 MRLAIEEAALATATGDVPVGAFVLGPDGTVLGRGHNVREAVGDPTGHAEVVAIRAAAAEV 96 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPCTMCA AI L+R+ R+ +GA +PK G + +H P Sbjct: 97 GEWRLSGCTLVVTLEPCTMCAGAIVLSRLARVVFGAYDPKAGAAGSLFDVVRDNRLNHRP 156 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + FF +R Sbjct: 157 EVIGGVLADACTAQLLAFFDTQR 179 >gi|242794450|ref|XP_002482376.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500] gi|218718964|gb|EED18384.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500] Length = 186 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 48/139 (34%), Positives = 71/139 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL + A E PVG V VLN KII N + T HAE LAI + Sbjct: 22 FMKEALLMGEKALAVGETPVGCVLVLNGKIIGSGMNDTNRSMNGTRHAEFLAIEEALQTY 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + I EVDLYVT+EPC MCA+ + I R+++G +N + GG + ++ + Sbjct: 82 PRSIFREVDLYVTVEPCVMCASLLRQYNICRVFFGCANERFGGTGSVLSLHSDPSIDPPY 141 Query: 127 EIYPGISEQRSRQIIQDFF 145 +Y GI + + +++ F+ Sbjct: 142 PVYGGIFKNDAIMLLRRFY 160 >gi|33862872|ref|NP_894432.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9313] gi|33634788|emb|CAE20774.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9313] Length = 163 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M L A+ E+PV AV + + + I N+ +D HAE++A+R + Sbjct: 6 WMLRLLTRAKQLGDFGEVPVSAVVLDADGRCIGHGSNQRHRRRDPLGHAELIALRQAAWL 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 S + L VTLEPC MCA A++ AR+ ++ + A +PK GG+ + + HH Sbjct: 66 RSDWRFNDCTLIVTLEPCPMCAGALTQARMGQVIFAAHDPKRGGLGSTIHLGEHPSAHHK 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G+ E +RQ ++ +FK++R Sbjct: 126 MRVLGGVMEVEARQQLEAWFKQQR 149 >gi|325962140|ref|YP_004240046.1| tRNA-adenosine deaminase [Arthrobacter phenanthrenivorans Sphe3] gi|323468227|gb|ADX71912.1| tRNA-adenosine deaminase [Arthrobacter phenanthrenivorans Sphe3] Length = 157 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 16/141 (11%) Query: 23 EIPVGAVAVLNNKIISRAG-NRNRELKDVTAHAEILAIRMGCRILSQ-----------EI 70 ++P+GAV + + + +G N+ EL D TAHAE++AIR L Q Sbjct: 16 DVPIGAVVIGPDGAVLGSGRNQREELGDPTAHAEVVAIREAAERLRQLSLNGGGRGDGWR 75 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CHHSPEI 128 L + L VTLEPC MCA AI LARI R+ +GA + K G G+ F L +H E+ Sbjct: 76 LSDCTLIVTLEPCAMCAGAIVLARIPRVVFGAWDEKAGA--AGSVFDVLRERRLNHWVEV 133 Query: 129 YPGISEQRSRQIIQDFFKERR 149 YPG+ E ++++FF R Sbjct: 134 YPGVREAECAALLREFFAGHR 154 >gi|320334320|ref|YP_004171031.1| tRNA(Ile)-lysidine synthase [Deinococcus maricopensis DSM 21211] gi|319755609|gb|ADV67366.1| tRNA(Ile)-lysidine synthase [Deinococcus maricopensis DSM 21211] Length = 529 Score = 83.6 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 52/146 (35%), Positives = 75/146 (51%), Gaps = 2/146 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +V M AL A+ A E+PVGAV + ++++RA N R D+T HAE+ A+R Sbjct: 383 HVAMGEALAAAREAFGNAEVPVGAVITGPDGQVVARAANTARAHGDMTRHAELDALRAAA 442 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L L LYVTLEPC MC A AR+ R+ +GA NPK G + T A Sbjct: 443 ATLGTAYLTGCTLYVTLEPCPMCLGAALEARVSRIVFGARNPKLGALGGVTDVLAYA-WG 501 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H P++ G+ + + ++ F+ R Sbjct: 502 HRPDVQGGVRAREASALLTGAFRTYR 527 >gi|308235514|ref|ZP_07666251.1| cytidine and deoxycytidylate deaminase zinc-binding region [Gardnerella vaginalis ATCC 14018] gi|311114084|ref|YP_003985305.1| putative cytosine deaminase [Gardnerella vaginalis ATCC 14019] gi|310945578|gb|ADP38282.1| possible cytosine deaminase [Gardnerella vaginalis ATCC 14019] Length = 154 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 55/146 (37%), Positives = 73/146 (50%), Gaps = 5/146 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL AQ A+ E+PVGAV V + II R N D +HAE+LAI+ Sbjct: 11 LMQEALRLAQVASDCGEVPVGAVVVDGSGVIIGRGSNLRERDSDPLSHAEVLAIKQAAES 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-- 123 L + L VTLEPC MCA AI I+R+ +GA + K G G+ + L H Sbjct: 71 KKSWNLSDCTLVVTLEPCPMCAGAILQTHIKRVVFGAWDSKLGAC--GSVWDILRDPHVG 128 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 P+++ + E QI+ DFFK R Sbjct: 129 SHPQVFGSVCESECVQILSDFFKNCR 154 >gi|71275637|ref|ZP_00651922.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella fastidiosa Dixon] gi|71897819|ref|ZP_00680045.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella fastidiosa Ann-1] gi|71163528|gb|EAO13245.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella fastidiosa Dixon] gi|71732374|gb|EAO34428.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella fastidiosa Ann-1] Length = 203 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 2/145 (1%) Query: 7 FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL A AA +EIPVGAV + ++ N N D +AHAEI+A+R Sbjct: 52 WMRHALTLAHRAATEFDEIPVGAVLISPEGTLLGEGCNYNITSHDPSAHAEIMALRAAGH 111 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L +P LYVTLEPC MCA AI ARI L Y A++PK G + +H Sbjct: 112 QLRNHRMPGCTLYVTLEPCLMCAMAIIHARIAHLIYAAADPKTGACGSTFDILNDPRHNH 171 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 +Y G+ + + + + ++F+ +R Sbjct: 172 HVHVYGGLLAEEASRRLTNYFRTKR 196 >gi|242018582|ref|XP_002429753.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Pediculus humanus corporis] gi|212514765|gb|EEB17015.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Pediculus humanus corporis] Length = 188 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/149 (32%), Positives = 83/149 (55%), Gaps = 13/149 (8%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAE---ILAIRMGC 63 +M AL A+NA NE+PVG + V +N+II+ N E K+ T HAE I + C Sbjct: 16 WMKIALGFAENALKNNEVPVGCIFVYDNEIIANGANTVNETKNATRHAEMNCIDTVLSWC 75 Query: 64 R---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFY 117 + + E+ +D+ VT+EPC MC+AA+ +++R+ YG N + GG + + ++ Y Sbjct: 76 KERNLNFTEVFKAMDVVVTVEPCIMCSAALFELKVKRITYGCKNYRFGGCSTVFDISKIY 135 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + C + G+ ++ S +++DF+K Sbjct: 136 RNSNC----VMVGGVYDEESINLLKDFYK 160 >gi|238021048|ref|ZP_04601474.1| hypothetical protein GCWU000324_00945 [Kingella oralis ATCC 51147] gi|237868028|gb|EEP69034.1| hypothetical protein GCWU000324_00945 [Kingella oralis ATCC 51147] Length = 238 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 71/127 (55%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V +II++A NR ++ HAEI A+ ++L L E D+YV+LEP Sbjct: 112 EVPVGAVVVHRGEIIAQAHNRCVADCSISHHAEIQALAAAGQVLGNYRLNECDVYVSLEP 171 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCA+A+ AR+ R+ + A PK G + ++ + + G+ ++Q +Q Sbjct: 172 CAMCASAMIQARVARVVFAAHEPKTGAAGSVLNLFSNNQLNQHTAMLGGLLADEAKQQLQ 231 Query: 143 DFFKERR 149 FF+ RR Sbjct: 232 AFFRLRR 238 >gi|307579329|gb|ADN63298.1| CMP/dCMP deaminase zinc-binding protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 151 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 74/144 (51%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALR-NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A AA +EIPVGAV + ++ N N D +AHAEI+A+R Sbjct: 1 MRHALTLAHRAATEFDEIPVGAVLISPEGTLLGEGCNYNITSHDPSAHAEIMALRAAGHQ 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L +P LYVTLEPC MCA AI ARI L Y A++PK G + +H Sbjct: 61 LRNHRMPGCTLYVTLEPCLMCAMAIIHARIAHLIYAAADPKTGACGSTFDILNDPRHNHH 120 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 +Y G+ + + + + ++F+ +R Sbjct: 121 VHVYGGLLAEEASRRLTNYFRTKR 144 >gi|310657385|ref|YP_003935106.1| guanine deaminase [Clostridium sticklandii DSM 519] gi|308824163|emb|CBH20201.1| guanine deaminase [Clostridium sticklandii] Length = 154 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 50/123 (40%), Positives = 69/123 (56%), Gaps = 2/123 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A++EA + LR P GAV V +NK+I+R N+ E D TAHAEI+AIR ++ Sbjct: 4 FMKEAIKEAFEGIGLRAGGPFGAVIVKDNKVIARGHNKVIETNDPTAHAEIVAIREATKL 63 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFYTLATCHH 124 L + L + LY T EPC MC +A A+I +YYGA+ I + + Y + H Sbjct: 64 LGRFDLSDCILYTTCEPCPMCYSAAHWAKIPLIYYGATQDDAKDIGFDDSYIYEVLQNKH 123 Query: 125 SPE 127 S E Sbjct: 124 SNE 126 >gi|169824845|ref|YP_001692456.1| putative deaminase [Finegoldia magna ATCC 29328] gi|167831650|dbj|BAG08566.1| putative deaminase [Finegoldia magna ATCC 29328] Length = 155 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E+A+ A +E+PVG V V N +II++A N + T HAE+ AI +++ Sbjct: 8 FMIKAIEQARIAFDMDEVPVGCVIVKNGEIIAQAYNSVETDNNATMHAELKAINQATQVI 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + +YVTLEPC MC A+ +RI ++ +GA + K G + +H Sbjct: 68 GNFRLDDCTMYVTLEPCVMCTGALVYSRIPKVVFGAFDKKRGACGSLLSLNDYEGLNHKI 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ I E+ +++Q FF+ R Sbjct: 128 EV-KSIMEKECVELMQSFFRRIR 149 >gi|320102361|ref|YP_004177952.1| tRNA-adenosine deaminase [Isosphaera pallida ATCC 43644] gi|319749643|gb|ADV61403.1| tRNA-adenosine deaminase [Isosphaera pallida ATCC 43644] Length = 185 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 3/136 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+ A+ A E+PVGAV VL+ +++++A N L+D TAHAE L + R Sbjct: 24 MTRALDLARAAVDLGEVPVGAV-VLDPLGRLLAQAHNLRETLEDPTAHAERLVLTWAARG 82 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LYVTLEPC MCA AI LAR+ R+ Y ++PK G + + + +H Sbjct: 83 LGTWRLEGCTLYVTLEPCVMCAGAIVLARVARVVYATNDPKAGACSSLYRILDDSRLNHR 142 Query: 126 PEIYPGISEQRSRQII 141 P++ G+ + + ++ Sbjct: 143 PQVEYGLFAREAGDLL 158 >gi|297587228|ref|ZP_06945873.1| tRNA-specific adenosine deaminase [Finegoldia magna ATCC 53516] gi|297575209|gb|EFH93928.1| tRNA-specific adenosine deaminase [Finegoldia magna ATCC 53516] Length = 155 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E+A+ A +E+PVG V V + +II++A N + K+ T HAE+ AI + Sbjct: 8 FMMKAIEQAKIAYDMDEVPVGCVIVKDGEIIAQAYNSVEKDKNATMHAELKAINQATEFI 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + +YVTLEPC MC A+ +RI ++ +GA + K G + +H Sbjct: 68 GNFRLDDCIMYVTLEPCVMCTGALVYSRIPKVVFGAFDKKRGACGSLISLNDYEGLNHKI 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ I E+ +++Q FF+ R Sbjct: 128 EV-KSIMEKECVELMQSFFRRIR 149 >gi|295671881|ref|XP_002796487.1| tRNA-specific adenosine deaminase [Paracoccidioides brasiliensis Pb01] gi|226283467|gb|EEH39033.1| tRNA-specific adenosine deaminase [Paracoccidioides brasiliensis Pb01] Length = 197 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/143 (32%), Positives = 72/143 (50%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K FM AL+ + A E PVG V V N +II N + + T HAE LA+ Sbjct: 16 KHEYFMRKALDMGEEALASGETPVGCVLVHNEEIIGSGMNDTNKSMNGTRHAEFLAVEEV 75 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R + I E DLYVT+EPC MCA+A+ RIR +++G +N + GG ++ Sbjct: 76 LRSYPRSIFHETDLYVTVEPCIMCASALRQYRIRHVFFGCANERFGGTGGVLNLHSDPGI 135 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 E+ G+ + + +++ F+ Sbjct: 136 DPPYELTGGLFRKEAIMLLRRFY 158 >gi|124023348|ref|YP_001017655.1| cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9303] gi|123963634|gb|ABM78390.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9303] Length = 163 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M L A+ E+PV AV + + + I N+ +D HAE++A+R + Sbjct: 6 WMLRLLTRAKQLGGLGEVPVSAVVLDADGRCIGHGSNQRHRGRDPLGHAELIALRQAAWL 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 S + L VTLEPC MCA A++ AR+ ++ + A +PK GG+ + + HH Sbjct: 66 RSDWRFNDCTLIVTLEPCPMCAGALTQARMGQVIFAAHDPKRGGLGSTINLGDHPSAHHK 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G+ E +RQ ++ +FK++R Sbjct: 126 MRVLGGVMEVEARQQLEAWFKQQR 149 >gi|77917942|ref|YP_355757.1| putative deaminase [Pelobacter carbinolicus DSM 2380] gi|77544025|gb|ABA87587.1| tRNA-adenosine deaminase [Pelobacter carbinolicus DSM 2380] Length = 159 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 72/142 (50%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EA AA E+PVGAV V + II R N D T HAE++AIR + Sbjct: 1 MQEALVEASAAARLGEVPVGAVVVKDGMIIGRGHNLRETSNDPTTHAEMIAIRQAAAAID 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L LYVTLEPC MC AI LARI RL +G+ +P+ G + + +H Sbjct: 61 SWRLIGCTLYVTLEPCVMCMGAIILARIPRLVFGSRDPRVGAVGSIFDLSRDERFNHQVA 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ S ++ FF++ R Sbjct: 121 VTEGVLALESSDMLSGFFRQLR 142 >gi|21355527|ref|NP_650610.1| CG5292 [Drosophila melanogaster] gi|7300237|gb|AAF55401.1| CG5292 [Drosophila melanogaster] gi|18447473|gb|AAL68299.1| RE41712p [Drosophila melanogaster] gi|220948458|gb|ACL86772.1| CG5292-PA [synthetic construct] gi|220960450|gb|ACL92761.1| CG5292-PA [synthetic construct] Length = 160 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 9/146 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL---AIRMGC 63 FM AL EA+ A E+PVG V V +K+++R GN ++ T HAE + AI C Sbjct: 4 FMEEALVEARRARDAGEVPVGCVFVHGDKVVARGGNEVNVHRNATRHAEFICIDAILASC 63 Query: 64 R---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + ++++ E+ + VT+EPC MC+AA+ ++ + YG N + GG T A Sbjct: 64 RERRLPARQLFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVAA 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 H EI G+ + +++DF+K Sbjct: 121 VVGHRIEITGGVRADEAMALLKDFYK 146 >gi|325917446|ref|ZP_08179655.1| tRNA-adenosine deaminase [Xanthomonas vesicatoria ATCC 35937] gi|325536320|gb|EGD08107.1| tRNA-adenosine deaminase [Xanthomonas vesicatoria ATCC 35937] Length = 171 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 6/147 (4%) Query: 7 FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL+ A+ A +EIPVGAV + +++ N N D +AHAEI+A+R G R Sbjct: 20 WMQHALQLAERAERDYDEIPVGAVLIDAEGQVLGEGWNYNIASHDPSAHAEIMAMREGGR 79 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L+ L LYVTLEPC MCA A+ ARI R+ + AS+PK G G+ F LA H Sbjct: 80 RLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 137 Query: 125 SPEIY--PGISEQRSRQIIQDFFKERR 149 + ++ G+ + + ++F+ +R Sbjct: 138 NHRVHVAGGVLAAEASLRLTNYFRAKR 164 >gi|257789865|ref|YP_003180471.1| CMP/dCMP deaminase zinc-binding [Eggerthella lenta DSM 2243] gi|317489321|ref|ZP_07947835.1| cytidine and deoxycytidylate deaminase zinc-binding region [Eggerthella sp. 1_3_56FAA] gi|325829718|ref|ZP_08163181.1| cytidine and deoxycytidylate deaminase zinc-binding region [Eggerthella sp. HGA1] gi|257473762|gb|ACV54082.1| CMP/dCMP deaminase zinc-binding [Eggerthella lenta DSM 2243] gi|316911566|gb|EFV33161.1| cytidine and deoxycytidylate deaminase zinc-binding region [Eggerthella sp. 1_3_56FAA] gi|325488213|gb|EGC90645.1| cytidine and deoxycytidylate deaminase zinc-binding region [Eggerthella sp. HGA1] Length = 167 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 16/157 (10%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN------------KIISRAGNRNRELKDVTAHA 54 +M A+EEA+ A +E+P+GAV V ++I+RA N +D HA Sbjct: 6 YMRMAIEEARRAEELDEVPIGAVVVYEPIDPGTRRPLAEPQVIARACNLRETTQDPAGHA 65 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E +A++ L L +YVTLEPC MCA + AR+ R YGA++PK G + GT Sbjct: 66 EFIALKQAAERLGVWRLTGCTVYVTLEPCVMCAGLMHQARVDRCVYGAADPKAGAL--GT 123 Query: 115 QFYTLAT--CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + A +H+ E G+ ++++ FF +R Sbjct: 124 LYAVNADERLNHTFEAVSGVLGDECAELLRSFFARKR 160 >gi|332284214|ref|YP_004416125.1| putative zinc-binding hydrolase [Pusillimonas sp. T7-7] gi|330428167|gb|AEC19501.1| putative zinc-binding hydrolase [Pusillimonas sp. T7-7] Length = 152 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 67/126 (53%), Gaps = 1/126 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE+A+ A E+PVGAV + ++I NR D T HAEI+A+R + Sbjct: 1 MRLALEQAELAYAAGEVPVGAVVLDAQGQLIGAGSNRTIGAHDPTGHAEIVALRAAAAHV 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP LYVTLEPC MC A+ AR+ R+ YGA +PK G + +T+ +H Sbjct: 61 RNYRLPGASLYVTLEPCAMCMGAMLHARLARVVYGAVDPKTGACGSVLSVHTVPQLNHQT 120 Query: 127 EIYPGI 132 + G+ Sbjct: 121 AVEGGV 126 >gi|167911457|ref|ZP_02498548.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 112] Length = 185 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 71/128 (55%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I+R N D +AHAE+ A+R R L +P +LYVTLE Sbjct: 51 GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 110 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC+ AI ARI R+ +GA +PK G + + A +H + G+ ++ Sbjct: 111 PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 170 Query: 142 QDFFKERR 149 + FF +RR Sbjct: 171 KSFFAQRR 178 >gi|206603205|gb|EDZ39685.1| Putative zinc-binding cytidine/deoxycytidylate deaminase [Leptospirillum sp. Group II '5-way CG'] Length = 162 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M+ AL EA+ A +NEIP+GA+ V N ++ R N+ D TAHAEI+A+R Sbjct: 15 WMTEALSEAKTAMKKNEIPIGALLVDGNGTVLGRGHNQRIGSMDPTAHAEIVALRSSGLH 74 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + LP LYVT+EPC MC A+ AR+ + +G P+ G + H Sbjct: 75 VKNYRLPGTTLYVTVEPCLMCFGALLEARVETVVFGIREPRWGVTGSLYDLQNDPRFPHR 134 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G+ + +++ FF+ RR Sbjct: 135 IRVREGVLSHACQDLLRSFFQSRR 158 >gi|219127140|ref|XP_002183799.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404522|gb|EEC44468.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 160 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/147 (31%), Positives = 80/147 (54%), Gaps = 4/147 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAV--AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM+ ALE++ A E+P+GA+ +V +I+ + N+ + D +AHAE+LA+R R Sbjct: 12 FMTMALEQSIVAGKCGEVPIGALVPSVHRLQILGSSHNQVEQKYDASAHAELLAMRQAAR 71 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--C 122 + L LY TLEPC +C A+ R+ R+ YGAS+ + G + + +A Sbjct: 72 RIRNWRLQSCTLYSTLEPCVVCLASCQAFRVSRVVYGASDFRLGAVHSHIALLDMAQHPF 131 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H+ + G+ S ++++ FF+ RR Sbjct: 132 HNVTSVIGGVHNTTSAELLRSFFRSRR 158 >gi|281202068|gb|EFA76273.1| adenosine deaminase [Polysphondylium pallidum PN500] Length = 213 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 13/160 (8%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI- 59 ++K + FM AL EA+ A E+PVG V V N+ +I+ N+ K+ T HAEI A+ Sbjct: 25 IEKHSKFMKLALNEAKKALDEGEVPVGCVIVHNDIVIAAGSNKTNIKKNATRHAEIEALD 84 Query: 60 -----RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + ++L + LYVT+EPC MCAA + LA+I +Y+G N K GG NG+ Sbjct: 85 SIYLSENASKFGGDKLLSDCKLYVTVEPCIMCAAVLQLAKINIVYFGCYNDKFGG--NGS 142 Query: 115 QFYTLA-TCH---HSPEIYPGISEQRSRQIIQDF-FKERR 149 + C H G+ + ++ ++Q F F+E + Sbjct: 143 ILPVHSIDCFERGHPYNCVSGVMKDQAIHLLQKFYFQENK 182 >gi|295676796|ref|YP_003605320.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1002] gi|295436639|gb|ADG15809.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1002] Length = 249 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/122 (36%), Positives = 66/122 (54%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I+ N D +AHAE++A+R + L LP +LYVTLEPC Sbjct: 79 VPVGAVLVRGDEVIATGFNHPIGAHDPSAHAEMVALRAAAQSLENYRLPGCELYVTLEPC 138 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARI R+ +GA +PK G + + +H + G+ E ++ Sbjct: 139 LMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPRLNHHTTVSGGVLEAECGAALRS 198 Query: 144 FF 145 FF Sbjct: 199 FF 200 >gi|318062198|ref|ZP_07980919.1| cytidine/deoxycytidine deaminase [Streptomyces sp. SA3_actG] gi|318079391|ref|ZP_07986723.1| cytidine/deoxycytidine deaminase [Streptomyces sp. SA3_actF] Length = 163 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 70/131 (53%), Gaps = 5/131 (3%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 EIPVGAV + + ++RA N D TAHAE+LA+R + + L L VTL Sbjct: 35 GEIPVGAVVLDASGTELARARNEREATHDPTAHAEVLALRRAAAVRGEWRLTGCTLVVTL 94 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CHHSPEIYPGISEQRSR 138 EPC MCA A++ +R+ R+ YGA +PK G G+Q+ L +H E+ G+ S Sbjct: 95 EPCPMCAGALTQSRVERVVYGARDPKAGAA--GSQWDLLRDRRLNHRAEVVEGVLAPEST 152 Query: 139 QIIQDFFKERR 149 ++ FF R Sbjct: 153 ALLDAFFTATR 163 >gi|332969045|gb|EGK08085.1| tRNA-specific adenosine deaminase [Kingella kingae ATCC 23330] Length = 246 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/110 (40%), Positives = 65/110 (59%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V +II++A NR D+ HAE+ A+ + + L L + DLYV+LEP Sbjct: 116 EVPVGAVVVHRGEIIAQAHNRCIADCDIGRHAEMNALALAGKTLGNYRLADCDLYVSLEP 175 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132 CTMCA+A+ ARIRR+ + AS PK G + +T + + + GI Sbjct: 176 CTMCASAMIQARIRRVIFAASEPKTGAAGSVINLFTNSQLNQHTAVLGGI 225 >gi|116074668|ref|ZP_01471929.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. RS9916] gi|116067890|gb|EAU73643.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. RS9916] Length = 167 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 3/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M L+ A+ + E+PV A+ VL+ K I GN +D HAE++AIR Sbjct: 10 WMGLLLQRAEAIGRQGEVPVSAL-VLDGKGRCIGFGGNTRERDQDPLGHAELVAIRQATV 68 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L + L VTLEPC MCA A+ AR+ ++ YGA +PK G + + HH Sbjct: 69 LRGDWRLNDCTLLVTLEPCPMCAGALVQARMGQVIYGARDPKRGAMGGTIDLSQHPSAHH 128 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E+ + ++ +F+ RR Sbjct: 129 HMKVIGGVLEEEASTMLAQWFRLRR 153 >gi|167894828|ref|ZP_02482230.1| putative deaminase [Burkholderia pseudomallei 7894] Length = 150 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 71/128 (55%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I+R N D +AHAE+ A+R R L +P +LYVTLE Sbjct: 3 GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 62 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC+ AI ARI R+ +GA +PK G + + A +H + G+ ++ Sbjct: 63 PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 122 Query: 142 QDFFKERR 149 + FF +RR Sbjct: 123 KSFFAQRR 130 >gi|53723703|ref|YP_103157.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei ATCC 23344] gi|52427126|gb|AAU47719.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei ATCC 23344] Length = 162 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 71/128 (55%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I+R N D +AHAE+ A+R R L +P +LYVTLE Sbjct: 15 GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 74 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC+ AI ARI R+ +GA +PK G + + A +H + G+ ++ Sbjct: 75 PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 134 Query: 142 QDFFKERR 149 + FF +RR Sbjct: 135 KSFFAQRR 142 >gi|78356822|ref|YP_388271.1| tRNA-adenosine deaminase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219227|gb|ABB38576.1| tRNA-adenosine deaminase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 172 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/151 (39%), Positives = 81/151 (53%), Gaps = 3/151 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK--DVTAHAEILA 58 K M ALE+A A L E+PVGAV V + + +G RNR + D TAHAEILA Sbjct: 22 WKSWEALMELALEQAVLAQLHGEVPVGAVVVAPDGAVLGSG-RNRPIATCDPTAHAEILA 80 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 IR C L + L VTLEPC MC AI AR+ + YGAS+ + G +++ Sbjct: 81 IRQACIHTGNYRLDDAVLVVTLEPCHMCTGAIIHARLAGVVYGASDKRAGAVDSCLDGLE 140 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 L +H P G+ E +++ +FFKE+R Sbjct: 141 LPFHNHRPWYMSGVCEAECSRLLAEFFKEKR 171 >gi|168010085|ref|XP_001757735.1| predicted protein [Physcomitrella patens subsp. patens] gi|162691011|gb|EDQ77375.1| predicted protein [Physcomitrella patens subsp. patens] Length = 413 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/157 (37%), Positives = 79/157 (50%), Gaps = 14/157 (8%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ AA E+PVGAV V NKII+R N D TAHAE+L IR L Sbjct: 214 FMQEALKEAKKAAKLGEVPVGAVLVHKNKIIARFHNEVETTGDPTAHAEMLCIRCAAAQL 273 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC---- 122 L +V LYVTLEPC MCA AI R+ + +GA N G + + + +++ Sbjct: 274 GGWRLTDVTLYVTLEPCPMCAGAILQGRVSEVVWGARNSLLGADGSWIKLFPVSSSGEQE 333 Query: 123 ----------HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + + G+ + I+Q FF RR Sbjct: 334 PKCKDYLHPFHRTITVRRGVLGEECGDIMQTFFAMRR 370 >gi|313606255|gb|EFR83242.1| tRNA-specific adenosine deaminase [Listeria monocytogenes FSL F2-208] Length = 116 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 62/102 (60%) Query: 48 KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 ++ HAE+LAI+ C+ + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK Sbjct: 7 QNAVTHAELLAIQDACKHQNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKA 66 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + +H+ E+ G+ E+ S ++++ FF++ R Sbjct: 67 GTAGSLMNLLQDDRFNHTCEVEAGLMEKESSEMLKSFFQDLR 108 >gi|53719734|ref|YP_108720.1| putative deaminase [Burkholderia pseudomallei K96243] gi|52210148|emb|CAH36126.1| putative deaminase [Burkholderia pseudomallei K96243] Length = 174 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 71/128 (55%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I+R N D +AHAE+ A+R R L +P +LYVTLE Sbjct: 27 GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 86 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC+ AI ARI R+ +GA +PK G + + A +H + G+ ++ Sbjct: 87 PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 146 Query: 142 QDFFKERR 149 + FF +RR Sbjct: 147 KSFFAQRR 154 >gi|302697295|ref|XP_003038326.1| hypothetical protein SCHCODRAFT_63904 [Schizophyllum commune H4-8] gi|300112023|gb|EFJ03424.1| hypothetical protein SCHCODRAFT_63904 [Schizophyllum commune H4-8] Length = 194 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 14/150 (9%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ A+ AQ A E+PVG + V +NKII+ A NR EL++ T HAE+ AI RIL Sbjct: 8 WMAEAMNMAQEALDAGEVPVGCIFVRDNKIIASARNRTNELRNATRHAELEAID---RIL 64 Query: 67 SQEIL-PEV--------DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN--GTQ 115 + + L PE+ LYVT+EPC MCA+A+ I+ ++YG N + GG + G Sbjct: 65 ADKTLTPEICEYPLDTTTLYVTVEPCIMCASALRQLGIKEVFYGCGNDRFGGCGSVLGVN 124 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 H + +PG + + I++ F+ Sbjct: 125 ESVPHPKHPAYRAHPGYLREEAIMILRRFY 154 >gi|224047988|ref|XP_002195924.1| PREDICTED: adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae) [Taeniopygia guttata] Length = 172 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 6/102 (5%) Query: 14 EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ----- 68 EA+ A + E+PVG + V N ++I R N E K+ T HAE++AI Q Sbjct: 14 EAKEALEKGEVPVGCLLVYNGEVIGRGRNEVNETKNATGHAEMVAIDQVLDWCKQHKRDY 73 Query: 69 -EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 E+ P++ LYVT+EPC MCAAA+ L +I R+ YG N + GG Sbjct: 74 REVFPQLVLYVTVEPCIMCAAAVRLMKIPRVVYGCRNERFGG 115 >gi|255017439|ref|ZP_05289565.1| tRNA-specific adenosine deaminase [Listeria monocytogenes FSL F2-515] Length = 109 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 39/101 (38%), Positives = 60/101 (59%) Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 + HAE+LAI+ C+ + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G Sbjct: 1 NAVTHAELLAIQDACKHQNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAG 60 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +H+ E+ G+ E S ++++ FF+E R Sbjct: 61 TAGSLMNLLQDDRFNHTCEVEAGLMESESSEMLKSFFQELR 101 >gi|317132506|ref|YP_004091820.1| CMP/dCMP deaminase zinc-binding protein [Ethanoligenens harbinense YUAN-3] gi|315470485|gb|ADU27089.1| CMP/dCMP deaminase zinc-binding protein [Ethanoligenens harbinense YUAN-3] Length = 160 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 77/144 (53%), Gaps = 1/144 (0%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M ALE+A+ A E+P+GAV V + ++ NR + AHAE AIR C Sbjct: 11 TWMRLALEQAERAGREGEVPIGAVIVKDGAALAVGRNRRETDHNALAHAEAEAIRAACAA 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LYVTLEPC MCA AI AR+ + +GA +PK G + ++ HH Sbjct: 71 LGSWRLSGCTLYVTLEPCPMCAGAIINARVDTVVFGAYDPKAGASGSVIDLFSCPFNHH- 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P + G+ E+ R+++QDFF R Sbjct: 130 PAVMGGVLEEDCRRLLQDFFAGLR 153 >gi|320009620|gb|ADW04470.1| CMP/dCMP deaminase zinc-binding protein [Streptomyces flavogriseus ATCC 33331] Length = 142 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66 M AL+EA AA ++PVGAV + + + G+ RE D TAHAE+LA+R L Sbjct: 1 MRQALDEAAQAASAGDVPVGAVVLGPDGALLATGHNEREASHDPTAHAEVLALRRAAAAL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA A+ +R+ R+ YGA + K G + +H P Sbjct: 61 GSWRLTGCTLVVTLEPCTMCAGALVQSRVARVVYGARDEKAGAAGSLWDVVRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 E+ G+ E ++ FF+ER Sbjct: 121 EVIHGVLEDLCADLLTAFFRER 142 >gi|25026753|ref|NP_736807.1| hypothetical protein CE0197 [Corynebacterium efficiens YS-314] gi|23492032|dbj|BAC17007.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 160 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A+ ++PVGAV + +I++ A NR +D TAHAEI+A+R R Sbjct: 18 MRHALEIARQTP-PGDVPVGAVIYAPDGQILATATNRRETDRDPTAHAEIIALRCAARRF 76 Query: 67 SQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L + L VTLEPC+MCA A+ AR+ RL +GA P+ G + H Sbjct: 77 TDGWRLTDCTLVVTLEPCSMCAGALVGARVGRLVFGAFEPRTGACGSVFDVVRDPAVLHR 136 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ +++ DFF +R Sbjct: 137 AEVTGGVLEEDCAKLMTDFFSGQR 160 >gi|224087290|ref|XP_002308113.1| predicted protein [Populus trichocarpa] gi|222854089|gb|EEE91636.1| predicted protein [Populus trichocarpa] Length = 155 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 46/112 (41%), Positives = 66/112 (58%), Gaps = 9/112 (8%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI------- 59 FM A+E+A++A E+PVG V V + K+I+ NR E ++ T HAE+ AI Sbjct: 16 FMELAIEQAEDALNSLEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAIDVLLEQW 75 Query: 60 -RMGCRILS-QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 ++G + E + LYVT EPC MCAAA+S+ I+ +YYG +N K GG Sbjct: 76 QKIGLSVSEVAEKISTCSLYVTCEPCIMCAAALSILGIKEVYYGCANDKFGG 127 >gi|270159636|ref|ZP_06188292.1| tRNA-specific adenosine deaminase [Legionella longbeachae D-4968] gi|289165578|ref|YP_003455716.1| tRNA-specific adenosine deaminase [Legionella longbeachae NSW150] gi|269987975|gb|EEZ94230.1| tRNA-specific adenosine deaminase [Legionella longbeachae D-4968] gi|288858751|emb|CBJ12656.1| tRNA-specific adenosine deaminase [Legionella longbeachae NSW150] Length = 149 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 7/147 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A E+A A E+PVGA+ V N N+++ N ++ D ++HAEI AIR + Sbjct: 6 WMRQAYEQALLAQTEGEVPVGAILVSNENQLLGAGRNLIQKSHDPSSHAEIQAIRQASQR 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK---GGGIENGTQFYTLATC 122 L L + LYVTLEPC MCA + ARI RL + + K G + N Q Y L Sbjct: 66 LQNHRLLDTTLYVTLEPCAMCAGLMVHARISRLVFATRDFKSGAAGSVYNLLQGYPL--- 122 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I GI + + ++ +FFK R Sbjct: 123 NHKVQIDEGIMQAQCASLLSEFFKACR 149 >gi|167824713|ref|ZP_02456184.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 9] gi|226200116|ref|ZP_03795662.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei Pakistan 9] gi|225927800|gb|EEH23841.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei Pakistan 9] Length = 198 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 71/128 (55%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I+R N D +AHAE+ A+R R L +P +LYVTLE Sbjct: 51 GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 110 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC+ AI ARI R+ +GA +PK G + + A +H + G+ ++ Sbjct: 111 PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 170 Query: 142 QDFFKERR 149 + FF +RR Sbjct: 171 KSFFAQRR 178 >gi|259508111|ref|ZP_05751011.1| tRNA-specific adenosine deaminase [Corynebacterium efficiens YS-314] gi|259164334|gb|EEW48888.1| tRNA-specific adenosine deaminase [Corynebacterium efficiens YS-314] Length = 159 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A+ ++PVGAV + +I++ A NR +D TAHAEI+A+R R Sbjct: 17 MRHALEIARQTP-PGDVPVGAVIYAPDGQILATATNRRETDRDPTAHAEIIALRCAARRF 75 Query: 67 SQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L + L VTLEPC+MCA A+ AR+ RL +GA P+ G + H Sbjct: 76 TDGWRLTDCTLVVTLEPCSMCAGALVGARVGRLVFGAFEPRTGACGSVFDVVRDPAVLHR 135 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ +++ DFF +R Sbjct: 136 AEVTGGVLEEDCAKLMTDFFSGQR 159 >gi|76811739|ref|YP_333930.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 1710b] gi|121599544|ref|YP_993329.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei SAVP1] gi|124383998|ref|YP_001029233.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei NCTC 10229] gi|126450143|ref|YP_001080836.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei NCTC 10247] gi|167000596|ref|ZP_02266407.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei PRL-20] gi|238562434|ref|ZP_04610071.1| tRNA-specific adenosine deaminase [Burkholderia mallei GB8 horse 4] gi|254177488|ref|ZP_04884143.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei ATCC 10399] gi|254189248|ref|ZP_04895759.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei Pasteur 52237] gi|254200108|ref|ZP_04906474.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei FMH] gi|254206447|ref|ZP_04912799.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei JHU] gi|254259652|ref|ZP_04950706.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 1710a] gi|254358144|ref|ZP_04974417.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei 2002721280] gi|76581192|gb|ABA50667.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 1710b] gi|121228354|gb|ABM50872.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei SAVP1] gi|124292018|gb|ABN01287.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei NCTC 10229] gi|126243013|gb|ABO06106.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei NCTC 10247] gi|147749704|gb|EDK56778.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei FMH] gi|147753890|gb|EDK60955.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei JHU] gi|148027271|gb|EDK85292.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei 2002721280] gi|157936927|gb|EDO92597.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei Pasteur 52237] gi|160698527|gb|EDP88497.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei ATCC 10399] gi|238522629|gb|EEP86072.1| tRNA-specific adenosine deaminase [Burkholderia mallei GB8 horse 4] gi|243063523|gb|EES45709.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei PRL-20] gi|254218341|gb|EET07725.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 1710a] Length = 198 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 71/128 (55%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I+R N D +AHAE+ A+R R L +P +LYVTLE Sbjct: 51 GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 110 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC+ AI ARI R+ +GA +PK G + + A +H + G+ ++ Sbjct: 111 PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 170 Query: 142 QDFFKERR 149 + FF +RR Sbjct: 171 KSFFAQRR 178 >gi|330470612|ref|YP_004408355.1| CMP/dCMP deaminase [Verrucosispora maris AB-18-032] gi|328813583|gb|AEB47755.1| CMP/dCMP deaminase [Verrucosispora maris AB-18-032] Length = 200 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 1/126 (0%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 +++PVGAV + G REL D TAHAE+LA+R G L + L L VTL Sbjct: 75 DDVPVGAVLYGPDGDELAIGRNERELTGDPTAHAEVLALRRGAERLGRWRLDGCILVVTL 134 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ L+R+ + +GA PK G + +H PE+Y G+ + + Sbjct: 135 EPCTMCAGALVLSRVSTVVFGAWEPKTGAAGSLWDVLRDRRLNHRPEVYGGVLATETGTV 194 Query: 141 IQDFFK 146 ++ FF+ Sbjct: 195 MRAFFR 200 >gi|254198049|ref|ZP_04904471.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei S13] gi|169654790|gb|EDS87483.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei S13] Length = 198 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 71/128 (55%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I+R N D +AHAE+ A+R R L +P +LYVTLE Sbjct: 51 GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 110 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC+ AI ARI R+ +GA +PK G + + A +H + G+ ++ Sbjct: 111 PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 170 Query: 142 QDFFKERR 149 + FF +RR Sbjct: 171 KSFFAQRR 178 >gi|126441141|ref|YP_001059426.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 668] gi|126454685|ref|YP_001066697.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 1106a] gi|134277676|ref|ZP_01764391.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 305] gi|167739120|ref|ZP_02411894.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 14] gi|217421765|ref|ZP_03453269.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 576] gi|237812753|ref|YP_002897204.1| tRNA-specific adenosine deaminase [Burkholderia pseudomallei MSHR346] gi|242317933|ref|ZP_04816949.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 1106b] gi|126220634|gb|ABN84140.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 668] gi|126228327|gb|ABN91867.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 1106a] gi|134251326|gb|EBA51405.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 305] gi|217395507|gb|EEC35525.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 576] gi|237506312|gb|ACQ98630.1| tRNA-specific adenosine deaminase [Burkholderia pseudomallei MSHR346] gi|242141172|gb|EES27574.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 1106b] Length = 198 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 71/128 (55%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I+R N D +AHAE+ A+R R L +P +LYVTLE Sbjct: 51 GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 110 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC+ AI ARI R+ +GA +PK G + + A +H + G+ ++ Sbjct: 111 PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 170 Query: 142 QDFFKERR 149 + FF +RR Sbjct: 171 KSFFAQRR 178 >gi|254297249|ref|ZP_04964702.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 406e] gi|157807925|gb|EDO85095.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 406e] Length = 198 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 71/128 (55%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I+R N D +AHAE+ A+R R L +P +LYVTLE Sbjct: 51 GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 110 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC+ AI ARI R+ +GA +PK G + + A +H + G+ ++ Sbjct: 111 PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 170 Query: 142 QDFFKERR 149 + FF +RR Sbjct: 171 KSFFAQRR 178 >gi|215422331|ref|NP_001135855.1| adenosine deaminase, tRNA-specific 2, TAD2 homolog [Nasonia vitripennis] Length = 169 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 46/147 (31%), Positives = 83/147 (56%), Gaps = 10/147 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR---MGC 63 +M ALE+A+ + + E+PVG + + NKII+ N E ++ T HAE+ I + C Sbjct: 6 WMDKALEKAEESLKKGEVPVGCLFLYENKIIATGSNTVNETRNATRHAELNCIDDVLVFC 65 Query: 64 RILS---QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + +E+ +D+ VT+EPC MCAAA+ +IR + YG +N + GG + Y ++ Sbjct: 66 QKNNYNYKEVFKNIDVVVTVEPCIMCAAALHQLQIRSIIYGCANDRFGGCK---SVYEVS 122 Query: 121 TCHHSP-EIYPGISEQRSRQIIQDFFK 146 + S + + + + Q+++DF+K Sbjct: 123 KVYESKINVVGNVKGEEAMQLLKDFYK 149 >gi|167919469|ref|ZP_02506560.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei BCC215] Length = 198 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 71/128 (55%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I+R N D +AHAE+ A+R R L +P +LYVTLE Sbjct: 51 GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 110 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC+ AI ARI R+ +GA +PK G + + A +H + G+ ++ Sbjct: 111 PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 170 Query: 142 QDFFKERR 149 + FF +RR Sbjct: 171 KSFFAQRR 178 >gi|115452727|ref|NP_001049964.1| Os03g0321900 [Oryza sativa Japonica Group] gi|108707878|gb|ABF95673.1| Cytidine and deoxycytidylate deaminase zinc-binding region family protein, expressed [Oryza sativa Japonica Group] gi|113548435|dbj|BAF11878.1| Os03g0321900 [Oryza sativa Japonica Group] gi|218192723|gb|EEC75150.1| hypothetical protein OsI_11352 [Oryza sativa Indica Group] Length = 183 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 72/134 (53%), Gaps = 9/134 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+A+ A E+PVG V V + K+IS N+ ++ T HAE+ AI + R Sbjct: 8 FMELALEQAKFALDNLEVPVGCVIVEDGKVISSGSNKTNATRNATRHAEMEAIDILLREW 67 Query: 67 SQEIL--PEV-------DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 L P+V DLYVT EPC MCA A+S+ IR +Y+G +N K GG + + Sbjct: 68 QGMGLDQPQVAEKFARCDLYVTCEPCIMCAMALSILGIREVYFGCANDKFGGCGSIMSLH 127 Query: 118 TLATCHHSPEIYPG 131 ++ S E PG Sbjct: 128 QSSSAELSGEEIPG 141 >gi|117919687|ref|YP_868879.1| tRNA-adenosine deaminase [Shewanella sp. ANA-3] gi|117612019|gb|ABK47473.1| tRNA-adenosine deaminase [Shewanella sp. ANA-3] Length = 222 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 69/143 (48%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A+ A E+PVGAV V + I+ N + D AHAEI +R + + Sbjct: 62 WMRVAMSMAEKAEAAGEVPVGAVLVKGGQQIAAGYNLSISEHDPCAHAEIQCLRAAGQTI 121 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA A+ +RI R+ +GA + K G +H Sbjct: 122 ENYRLLDTTLYVTLEPCAMCAGAMVHSRIARVVFGAKDEKTGAAGTVLNLLQHPAFNHQV 181 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ Q + FFK RR Sbjct: 182 EVTSGVLAQDCADQLSRFFKRRR 204 >gi|167903219|ref|ZP_02490424.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei NCTC 13177] gi|254179364|ref|ZP_04885963.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 1655] gi|184209904|gb|EDU06947.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 1655] Length = 198 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 71/128 (55%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I+R N D +AHAE+ A+R R L +P +LYVTLE Sbjct: 51 GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 110 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC+ AI ARI R+ +GA +PK G + + A +H + G+ ++ Sbjct: 111 PCLMCSGAIMHARIGRVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 170 Query: 142 QDFFKERR 149 + FF +RR Sbjct: 171 KSFFAQRR 178 >gi|219684000|ref|YP_002470383.1| cytidine and deoxycytidylate deaminase [Bifidobacterium animalis subsp. lactis AD011] gi|219621650|gb|ACL29807.1| possible cytidine and deoxycytidylate deaminase [Bifidobacterium animalis subsp. lactis AD011] Length = 152 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL +A+ A ++PVGAV + + ++I R N D AHAEI+A+R + Sbjct: 8 MGEALAQARMARSAGDVPVGAVVLDAHGEVIGRGRNLRERDADPLAHAEIVAMREAAAVR 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPC MCA A RI R+ +G + K G + H P Sbjct: 68 GNWNLADCTLVVTLEPCPMCAGACLQTRIGRIVFGGWDAKLGACGSVWDIPRDPHVGHEP 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y G+ E+ ++ +FF RR Sbjct: 128 EVYGGVCERECTALLAEFFHSRR 150 >gi|146295406|ref|YP_001179177.1| CMP/dCMP deaminase, zinc-binding [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145408982|gb|ABP65986.1| tRNA-adenosine deaminase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 143 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 72/127 (56%), Gaps = 3/127 (2%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 +IP+ A + + +IIS N + K+ HAEILAI LS + L ++ VT EP Sbjct: 19 DIPIAAAVLRDGEIISIQKNDS---KNAIFHAEILAILDAASKLSTKDLRGCEMVVTKEP 75 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MC +AI L++I RLY+GA + K G E+ + +H E+ GI E+ + +++ Sbjct: 76 CPMCMSAIVLSKIDRLYFGARDFKMGAAESCFKLSQDPNLNHKVEVIGGICEEECKALLK 135 Query: 143 DFFKERR 149 FF++RR Sbjct: 136 SFFEKRR 142 >gi|303234521|ref|ZP_07321158.1| cytidine and deoxycytidylate deaminase zinc-binding region [Finegoldia magna BVS033A4] gi|302494355|gb|EFL54124.1| cytidine and deoxycytidylate deaminase zinc-binding region [Finegoldia magna BVS033A4] Length = 155 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E+A+ A +E+PVG V V N +II++A N + T HAE+ AI +++ Sbjct: 8 FMIKAIEQARIAFDLDEVPVGCVIVKNGEIIAQAYNSVETDNNATMHAELKAINQATQVI 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +YVTLEPC MC A+ +RI ++ +GA + K G + +H Sbjct: 68 GNFRLDNCTMYVTLEPCVMCTGALVYSRIPKVVFGAFDKKRGACGSLLSLNDYEGLNHKI 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ I E+ +++Q FF+ R Sbjct: 128 EV-KSIMEKECVELMQSFFRRIR 149 >gi|242279729|ref|YP_002991858.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio salexigens DSM 2638] gi|242122623|gb|ACS80319.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio salexigens DSM 2638] Length = 169 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 2/145 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ EA A E+P+GA + ++++ N D T HAE+ IR C+ Sbjct: 23 MMDTAIREAFKARRHEEVPIGAALFTAEGELLATGNNTPLTQNDPTGHAEVNCIRNACKN 82 Query: 66 LSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L LP L VTLEPC MC AI AR+ + +GA +PK G + + + L+ +H Sbjct: 83 LDNYRLPRGTILVVTLEPCIMCLGAIIHARVGGVVFGAPDPKAGAVVSNLEGTDLSFANH 142 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 G+ E ++I+Q FF +R Sbjct: 143 KFWTIGGVCENECKEILQSFFLHKR 167 >gi|183602639|ref|ZP_02964003.1| possible cytidine and deoxycytidylate deaminase [Bifidobacterium animalis subsp. lactis HN019] gi|241191605|ref|YP_002968999.1| Cytosine/adenosine deaminase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241197010|ref|YP_002970565.1| Cytosine/adenosine deaminase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218057|gb|EDT88704.1| possible cytidine and deoxycytidylate deaminase [Bifidobacterium animalis subsp. lactis HN019] gi|240249997|gb|ACS46937.1| Cytosine/adenosine deaminase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251564|gb|ACS48503.1| Cytosine/adenosine deaminase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295794597|gb|ADG34132.1| Cytosine/adenosine deaminase [Bifidobacterium animalis subsp. lactis V9] Length = 169 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL +A+ A ++PVGAV + + ++I R N D AHAEI+A+R + Sbjct: 25 MGEALAQARMARSAGDVPVGAVVLDAHGEVIGRGRNLRERDADPLAHAEIVAMREAAAVR 84 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPC MCA A RI R+ +G + K G + H P Sbjct: 85 GNWNLADCTLVVTLEPCPMCAGACLQTRIGRIVFGGWDAKLGACGSVWDIPRDPHVGHEP 144 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y G+ E+ ++ +FF RR Sbjct: 145 EVYGGVCERECTALLAEFFHSRR 167 >gi|156186024|gb|ABU55330.1| cytidine and deoxycytidylate deaminase family protein [Callosobruchus chinensis] Length = 71 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 3/72 (4%) Query: 34 NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93 + ++S A N + D TAHAE+ AI+ C +LS L + D+YVTLEPC MCA AIS A Sbjct: 3 SNVVSSAHNIS---NDPTAHAEMFAIKQECELLSTSTLYDSDIYVTLEPCPMCAQAISFA 59 Query: 94 RIRRLYYGASNP 105 RI+RLY+GA NP Sbjct: 60 RIKRLYFGAYNP 71 >gi|115727549|ref|XP_789050.2| PREDICTED: similar to deaminase domain containing 1 [Strongylocentrotus purpuratus] gi|115955250|ref|XP_001190121.1| PREDICTED: similar to deaminase domain containing 1 [Strongylocentrotus purpuratus] Length = 201 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 8/148 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ A+ A+ A R E+PVG + V ++II GN E K+ T HAEILA+ R Sbjct: 12 WMTEAVNMAKQALGRGEVPVGCLLVYEDQIIGTGGNAVNETKNATRHAEILALEEAMRWC 71 Query: 67 S------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN--GTQFYT 118 +E+ L+VT+EPC MCA A+ + I+++ YG N + GG + Sbjct: 72 DDKQLEREEVFSRTKLFVTVEPCIMCAGALRIMGIKKVVYGCRNERFGGCGSILSVNSDE 131 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146 L + E G+ + Q++Q+F+K Sbjct: 132 LPSIGEPFECKAGLYADTAVQLLQEFYK 159 >gi|289177738|gb|ADC84984.1| tRNA-specific adenosine deaminase [Bifidobacterium animalis subsp. lactis BB-12] Length = 204 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 1/140 (0%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 AL +A+ A ++PVGAV + + ++I R N D AHAEI+A+R + Sbjct: 63 ALAQARMARSAGDVPVGAVVLDAHGEVIGRGRNLRERDADPLAHAEIVAMREAAAVRGNW 122 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 L + L VTLEPC MCA A RI R+ +G + K G + H PE+Y Sbjct: 123 NLADCTLVVTLEPCPMCAGACLQTRIGRIVFGGWDAKLGACGSVWDIPRDPHVGHEPEVY 182 Query: 130 PGISEQRSRQIIQDFFKERR 149 G+ E+ ++ +FF RR Sbjct: 183 GGVCERECTALLAEFFHSRR 202 >gi|78778025|ref|YP_394340.1| guanine deaminase [Sulfurimonas denitrificans DSM 1251] gi|78498565|gb|ABB45105.1| Guanine deaminase [Sulfurimonas denitrificans DSM 1251] Length = 149 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 1/109 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K ++FM A++EA R + P GAV V + K+I++A NR +L D TAHAEI AIR Sbjct: 2 KHSIFMKKAIKEATFGVERGDGGPFGAVIVKDGKVIAKAHNRVLKLNDATAHAEIEAIRK 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 + L L E ++Y T PC MC AI A I+ +Y+GA++ I Sbjct: 62 ASKKLLTYDLSECEIYTTCMPCPMCMGAIRWANIKSVYFGATSQDADDI 110 >gi|256397666|ref|YP_003119230.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM 44928] gi|256363892|gb|ACU77389.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM 44928] Length = 157 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 13/141 (9%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEI---------- 70 ++P+GAV + + G RE + D T HAEI+AIR L + Sbjct: 15 GDVPIGAVILDPTGTVIAQGRNTREAEGDPTGHAEIVAIRSAAHTLHTKAAQTDPKAPPT 74 Query: 71 --LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 L + L VTLEPC MCA AI L+R+ R+ +GA +PK G + +H+PE+ Sbjct: 75 WRLTDCTLVVTLEPCPMCAGAIVLSRLTRVVFGAWDPKAGAAGSLYDILRDPRLNHTPEV 134 Query: 129 YPGISEQRSRQIIQDFFKERR 149 PG+ E + + FF+ R Sbjct: 135 IPGVLEPQCHAALNRFFEHHR 155 >gi|325117380|emb|CBZ52932.1| Cytidine and deoxycytidylate deaminase family protein, related [Neospora caninum Liverpool] Length = 348 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 12/152 (7%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM-- 61 +FMS ALEEA++A E+PVG V V +++++ N K+ T H E+ A+ Sbjct: 181 LFMSAALEEARSALQEGEVPVGCVLVDSRTRQVVAKGRNATNRTKNATRHCELEALDAYM 240 Query: 62 ----GCRILSQEI---LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 RI E + +DL+VT EPC MCA A+ + I+R++YG N + GG + Sbjct: 241 ARFPPTRIGDSEAPVDMSSIDLFVTCEPCVMCAVALQCSGIKRVFYGCGNDRFGGCGSVL 300 Query: 115 QFYTLATCHHSP-EIYPGISEQRSRQIIQDFF 145 F+ + H + E PGI + + +++ F+ Sbjct: 301 SFHKKLSAHWTGLECCPGIFREEAIDLLRSFY 332 >gi|212716206|ref|ZP_03324334.1| hypothetical protein BIFCAT_01122 [Bifidobacterium catenulatum DSM 16992] gi|212660866|gb|EEB21441.1| hypothetical protein BIFCAT_01122 [Bifidobacterium catenulatum DSM 16992] Length = 149 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 68/143 (47%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+E A+ AA E+PVGAV + +I R N D AHAE+ A+ R L Sbjct: 7 MGLAIELAREAAAEGEVPVGAVVLDAGGAVIGRGRNLREAHADPLAHAEVKAMTQAARSL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPC MCA A + R+ +GA + K G + H P Sbjct: 67 GTWNLADCTLIVTLEPCPMCAGACLQTHVGRIVFGAWDAKLGACGSIWDIPRDPHVGHVP 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E +++ DFF +R Sbjct: 127 EVVGGVCEMECARLMTDFFAGKR 149 >gi|238508831|ref|XP_002385598.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357] gi|317157687|ref|XP_001826520.2| cytidine and deoxycytidylate deaminase zinc-binding domain protein [Aspergillus oryzae RIB40] gi|220688490|gb|EED44843.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357] Length = 174 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 45/139 (32%), Positives = 72/139 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL + A E PVG V V +N+I+S N + T HAE +A+ R Sbjct: 10 FMKQALLMGEKALETGETPVGCVLVYDNQIVSSGMNDTNRSMNGTRHAEFIALERMLRNY 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + +L LYVT+EPC MCA+A+ RI+ +Y+G SN + GG + +T + Sbjct: 70 PKSLLRSTKLYVTVEPCVMCASALRQYRIQAVYFGCSNERFGGTGSILSLHTDFSIDPPY 129 Query: 127 EIYPGISEQRSRQIIQDFF 145 +Y G+ + + +++ F+ Sbjct: 130 PVYGGLFSKEAVMLLRRFY 148 >gi|212535962|ref|XP_002148137.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Penicillium marneffei ATCC 18224] gi|210070536|gb|EEA24626.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Penicillium marneffei ATCC 18224] Length = 190 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 47/124 (37%), Positives = 62/124 (50%), Gaps = 6/124 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL + A E PVG V VL KII N + T HAE LAI + Sbjct: 26 FMKEALSMGEKALEAGETPVGCVLVLQGKIIGSGMNDTNRSMNGTRHAEFLAIEEALQTY 85 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + I VDLYVT+EPC MCA+ + IRR+++G +N + GG ++ + H P Sbjct: 86 PRSIFKHVDLYVTVEPCVMCASLLRQYNIRRVFFGCANERFGGTG------SVLSLHSDP 139 Query: 127 EIYP 130 I P Sbjct: 140 CIDP 143 >gi|56757936|gb|AAW27108.1| SJCHGC09107 protein [Schistosoma japonicum] Length = 165 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 21/155 (13%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR---MGCR 64 M A E AQ A NE+PVG V ++I+ N +D T HAE++ IR CR Sbjct: 1 MDVAFELAQEALKCNEVPVGCAFVYKGEVIASGRNEVNATRDATQHAEMITIRHLEQWCR 60 Query: 65 ---ILSQEILPEVDLYVTLEPCTMCAAAISL---ARIRRLYYGASNPKGGGIENGTQFYT 118 I ++L E DLYVT+EPC MC AAI A ++ + YGA N + GG + Sbjct: 61 KNEIEFDKVLTECDLYVTVEPCIMCTAAIRFCLPAHLKSITYGARNERFGGCG------S 114 Query: 119 LATCHHSPE------IYPGISEQRSRQIIQDFFKE 147 + + H+SP PG+ + + ++++ F+ + Sbjct: 115 VLSVHNSPSSVPALNCVPGVEAETAVKLLKRFYAQ 149 >gi|325104971|ref|YP_004274625.1| Guanine deaminase [Pedobacter saltans DSM 12145] gi|324973819|gb|ADY52803.1| Guanine deaminase [Pedobacter saltans DSM 12145] Length = 158 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 44/98 (44%), Positives = 59/98 (60%), Gaps = 1/98 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ A+E+A +N P G+V V N KIIS GN + D TAHAEI AIR+ C+ Sbjct: 9 FMNLAIEKASENVKTGKGGPFGSVIVKNGKIISATGNTVNKTCDPTAHAEIAAIRLACQE 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L L ++Y + EPC MC +AI A+I +LYY A+ Sbjct: 69 LKSVTLEGCEIYASCEPCPMCLSAIYWAKIDKLYYAAT 106 >gi|328883836|emb|CCA57075.1| tRNA-specific adenosine-34 deaminase [Streptomyces venezuelae ATCC 10712] Length = 190 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL EA A ++PVGAV + + +++RA N D TAHAE+LA+R Sbjct: 48 VMRIALAEADAALPAGDVPVGAVVLGPDGAVLARAHNEREATGDPTAHAEVLALRRAAVA 107 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L L VTLEPC MCA A+ +R+ R+ +GA + K G + +H Sbjct: 108 TGEWRLTGCTLVVTLEPCVMCAGALVQSRVERVVFGAPDEKAGAAGSLWDLVRDRRLNHR 167 Query: 126 PEIYPGISEQRSRQIIQDFFKER 148 PE+ G+ + + FF+ R Sbjct: 168 PEVIQGVLGAECAEQLTAFFRTR 190 >gi|223937372|ref|ZP_03629277.1| CMP/dCMP deaminase zinc-binding [bacterium Ellin514] gi|223893923|gb|EEF60379.1| CMP/dCMP deaminase zinc-binding [bacterium Ellin514] Length = 155 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 39/92 (42%), Positives = 53/92 (57%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V N KI+ R N+ D TAHAE++AIR C+ L L + +LY + EPC Sbjct: 24 PFGAVVVKNGKIVGRGCNQVTSTNDPTAHAEVVAIRDACKRLKTFQLDDCELYTSCEPCP 83 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC +AI AR++++YYG + IE F Sbjct: 84 MCLSAIYWARLKKVYYGNTRKDAAEIEFDDDF 115 >gi|169627373|ref|YP_001701022.1| cytidine/deoxycytidylate deaminase family protein [Mycobacterium abscessus ATCC 19977] gi|169239340|emb|CAM60368.1| Cytidine/deoxycytidylate deaminase family protein [Mycobacterium abscessus] Length = 152 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 2/130 (1%) Query: 22 NEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79 ++P+GAV + ++RA N L D TAHAE+LA+R L L VT Sbjct: 23 QDVPIGAVIYAADGTELARAANARERLGDPTAHAEVLALRAAAAKHGDGWRLEGATLAVT 82 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 +EPCTMCA A+ LAR+ R+ +GA PK G + + H PE+ G+ E Sbjct: 83 VEPCTMCAGALVLARVGRVVFGAWEPKTGAVGSLWDVVRDRRQAHRPEVRGGVLEHECAA 142 Query: 140 IIQDFFKERR 149 +++ FF +R Sbjct: 143 LLERFFAAKR 152 >gi|15616866|ref|NP_240079.1| hypothetical protein BU255 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219682178|ref|YP_002468562.1| tRNA-specific adenosine deaminase monomer (YfhC) [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|14286004|sp|P57343|Y255_BUCAI RecName: Full=Uncharacterized protein BU255 gi|25303863|pir||E84959 hypothetical protein yfhC [imported] - Buchnera sp. (strain APS) gi|10038930|dbj|BAB12965.1| hypothetical protein yfhC [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219621911|gb|ACL30067.1| tRNA-specific adenosine deaminase monomer (YfhC) [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086568|gb|ADP66649.1| tRNA-specific adenosine deaminase monomer (YfhC) [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087149|gb|ADP67229.1| tRNA-specific adenosine deaminase monomer (YfhC) [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087683|gb|ADP67762.1| tRNA-specific adenosine deaminase monomer (YfhC) [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 161 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 47/147 (31%), Positives = 75/147 (51%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K +M AL+ A A + EIP+GA+ V +II N + D TAHAEI+A+R Sbjct: 5 KDKNWMKIALKYAYYAKEKGEIPIGAILVFKERIIGIGWNSSISKNDPTAHAEIIALRGA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L LYVTL+PC MC AI +RI+RL +GA+ + + Sbjct: 65 GKKIKNYRLLNTTLYVTLQPCIMCCGAIIQSRIKRLVFGANCNSSDHRFSLKNLFCDPQK 124 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 + +I + ++ I+ +FF+++R Sbjct: 125 DYKLDIKKNVMQRECSDILINFFQKKR 151 >gi|121609574|ref|YP_997381.1| CMP/dCMP deaminase [Verminephrobacter eiseniae EF01-2] gi|121554214|gb|ABM58363.1| CMP/dCMP deaminase, zinc-binding [Verminephrobacter eiseniae EF01-2] Length = 482 Score = 81.3 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 50/126 (39%), Positives = 72/126 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL +A++AA E+PVGAV V + ++I+ N D +AHAEILA+R R L Sbjct: 33 WMRQALAQAEDAARAGEVPVGAVVVKDGQLIATGRNAPLARHDPSAHAEILALRAAARRL 92 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MC+ A+ AR+ RL YGA++P+ G + + A +H Sbjct: 93 GNYRLDGCSLYVTLEPCAMCSGALLQARLARLVYGAADPRTGAAGSVLDLFGDARLNHQT 152 Query: 127 EIYPGI 132 + G+ Sbjct: 153 RVQGGV 158 >gi|219681621|ref|YP_002468007.1| hypothetical protein YfhC [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471309|ref|ZP_05635308.1| hypothetical protein BaphL_01255 [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|219624464|gb|ACL30619.1| hypothetical protein YfhC [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 161 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 47/147 (31%), Positives = 75/147 (51%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K +M AL+ A A + EIP+GA+ V +II N + D TAHAEI+A+R Sbjct: 5 KDKNWMKIALKYAYYAKEKGEIPIGAILVFKERIIGIGWNSSISKNDPTAHAEIIALRGA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L LYVTL+PC MC AI +RI+RL +GA+ + + Sbjct: 65 GKKIKNYRLLNTTLYVTLQPCIMCCGAIIQSRIKRLVFGANCNSSDHRFSLKNLFCNPQK 124 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 + +I + ++ I+ +FF+++R Sbjct: 125 DYKLDIKKNVMQRECSDILINFFQKKR 151 >gi|227496672|ref|ZP_03926948.1| cytosine deaminase [Actinomyces urogenitalis DSM 15434] gi|226833820|gb|EEH66203.1| cytosine deaminase [Actinomyces urogenitalis DSM 15434] Length = 154 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 70/129 (54%), Gaps = 3/129 (2%) Query: 23 EIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV VL+ ++I+ A N D TAHAE+ A+R L+ L L VTL Sbjct: 27 EVPVGAV-VLDPGGRVIAEAANARETEHDPTAHAEVRALRAAGARLADSHLDGCTLVVTL 85 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA AI LAR++R+ GA PK G + +H E+ G+ S + Sbjct: 86 EPCTMCAGAIQLARLQRVVLGAWEPKTGACGSVRDVLRDPRANHQVEVVAGVGASESEAL 145 Query: 141 IQDFFKERR 149 +++FF RR Sbjct: 146 LREFFARRR 154 >gi|119179553|ref|XP_001241350.1| hypothetical protein CIMG_08513 [Coccidioides immitis RS] Length = 230 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 47/139 (33%), Positives = 68/139 (48%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+ A+ A E PVG V V + K+I R N + T HAE LAI R Sbjct: 54 FMREALQMAEQALAIGETPVGCVLVHDGKVIGRGMNDTNRSLNGTRHAEFLAIEEALRSY 113 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + I DLYVT+EPC MCA+ + IRR+++G N + GG ++ Sbjct: 114 PRSIFRTTDLYVTVEPCIMCASLLRQNYIRRVFFGCVNDRFGGTGGVLNLHSDRAIDPPY 173 Query: 127 EIYPGISEQRSRQIIQDFF 145 +Y GI + +++ F+ Sbjct: 174 TVYGGIFRNEAIMLLRRFY 192 >gi|226528904|ref|NP_001152082.1| tRNA-specific adenosine deaminase [Zea mays] gi|195624114|gb|ACG33887.1| tRNA-specific adenosine deaminase [Zea mays] gi|195652465|gb|ACG45700.1| tRNA-specific adenosine deaminase [Zea mays] Length = 183 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 9/113 (7%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALE+A+ A E+PVG V V + K+IS N+ ++ T HAE+ AI + R Sbjct: 4 TFMELALEQAKFALDNLEVPVGCVIVEDGKVISSGSNKTNATRNATRHAEMEAIDVLLRE 63 Query: 66 LSQEIL--PEV-------DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 L P+V DLYVT EPC MCA A+S+ IR +Y+G +N K GG Sbjct: 64 WQSMGLDQPQVAEKFAGCDLYVTCEPCIMCATALSIIGIREVYFGCANDKFGG 116 >gi|285018425|ref|YP_003376136.1| cytidine / deoxycytidylate deaminase [Xanthomonas albilineans GPE PC73] gi|283473643|emb|CBA16146.1| putative cytidine / deoxycytidylate deaminase protein [Xanthomonas albilineans] Length = 165 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 6/147 (4%) Query: 7 FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL A+ A +EIPVGAV V + ++ N N D +AHAEI+A+R R Sbjct: 14 WMRHALALAERAEREFDEIPVGAVLVSAEDAVLGEGWNLNIAEHDPSAHAEIVALRQAGR 73 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L LP LYVTLEPC MCA A+ AR+ L Y A++PK G G+ F L H Sbjct: 74 RLGNHRLPGSTLYVTLEPCAMCAMALVHARVAELVYAAADPKTGAC--GSVFDLLGDPRH 131 Query: 125 SP--EIYPGISEQRSRQIIQDFFKERR 149 + ++ G+ + + ++F+ +R Sbjct: 132 NHRVQVRGGVLAAAASVRLTNYFRAKR 158 >gi|91201072|emb|CAJ74130.1| similar to guanine deaminase [Candidatus Kuenenia stuttgartiensis] Length = 182 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 41/97 (42%), Positives = 58/97 (59%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ +A+ L + P GA + NN++IS N + D+TAHAEI+AIR C+IL Sbjct: 32 WMRLAINKAKEGILDGQTPFGACIIKNNRLISCVHNHVWKNTDITAHAEIIAIREACKIL 91 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + L +Y T EPC MC +A ARI ++ YGAS Sbjct: 92 NTVDLSGCTIYSTCEPCPMCFSACHWARIAKIVYGAS 128 >gi|21672527|ref|NP_660594.1| hypothetical protein BUsg246 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25091621|sp|Q8K9R4|Y246_BUCAP RecName: Full=Uncharacterized protein BUsg_246 gi|21623150|gb|AAM67805.1| hypothetical 20.0 kDa protein [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 151 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 73/149 (48%), Gaps = 13/149 (8%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+ A A E+P+GA+ V KII N D TAHAEI+A+R R + Sbjct: 9 WMKIALKYAYYAEENGEVPIGAILVFQEKIIGTGWNSVISQNDSTAHAEIIALREAGRNI 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS------NPKGGGIENGTQFYTLA 120 L LYVTL+PC MC AI +RI+RL +GAS NP I F L Sbjct: 69 KNYRLVNTTLYVTLQPCMMCCGAIINSRIKRLVFGASYKDLKKNPFLKKI-----FINLE 123 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +I I +I+ +FFK +R Sbjct: 124 --KNKLKIKKHIMRNECAKILSNFFKNKR 150 >gi|294495546|ref|YP_003542039.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii DSM 5219] gi|292666545|gb|ADE36394.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii DSM 5219] Length = 150 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 48/121 (39%), Positives = 69/121 (57%), Gaps = 5/121 (4%) Query: 8 MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+E+A+ +RN + P GAV V + +ISRA NR + D TAHAEI+AIR+ Sbjct: 1 MEIAIEQAR-LGMRNNLGGPFGAVIVKDETVISRAHNRVLDSNDPTAHAEIMAIRIASSK 59 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP--KGGGIENGTQFYTLATCH 123 L L E ++Y T PC MC +A+ ARI+ LYYG + + G ++G + L H Sbjct: 60 LGTFDLSECEIYTTSYPCPMCMSALYWARIKTLYYGTTTTEVEKIGFDDGQIYRALCKGH 119 Query: 124 H 124 + Sbjct: 120 N 120 >gi|195110631|ref|XP_001999883.1| GI24773 [Drosophila mojavensis] gi|193916477|gb|EDW15344.1| GI24773 [Drosophila mojavensis] Length = 160 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 9/146 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC--- 63 FM AL EA+ A E+PVG V V N+K+I+R GN ++ T HAE + I Sbjct: 4 FMEEALVEARRARDAGEVPVGCVFVHNDKVIARGGNEVNVHRNATRHAEFICIDATLAYC 63 Query: 64 ---RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R+ ++++ E+ + VT+EPC MC+AA+ ++ + YG N + GG T A Sbjct: 64 REKRLPARQVFSEISVVVTVEPCIMCSAALHTLAVKEIIYGCENDRFGG---KTVIDVAA 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 I G+ + +++DF+K Sbjct: 121 VVGQQINITGGVRADEAMALLKDFYK 146 >gi|21231608|ref|NP_637525.1| hypothetical protein XCC2169 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768270|ref|YP_243032.1| hypothetical protein XC_1949 [Xanthomonas campestris pv. campestris str. 8004] gi|188991407|ref|YP_001903417.1| Putative cytidine / deoxycytidylate deaminase family protein [Xanthomonas campestris pv. campestris str. B100] gi|21113299|gb|AAM41449.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573602|gb|AAY49012.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] gi|167733167|emb|CAP51365.1| Putative cytidine / deoxycytidylate deaminase family protein [Xanthomonas campestris pv. campestris] Length = 171 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 6/147 (4%) Query: 7 FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M+ AL A+ A +EIPVGAV V ++ N N D +AHAEI+A+R G R Sbjct: 20 WMTHALRLAERAERDYDEIPVGAVLVDPTGALLGEGWNFNIASHDPSAHAEIMAMREGGR 79 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L+ L LYVTLEPC MCA A+ ARI R+ + AS+PK G G+ F LA H Sbjct: 80 RLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 137 Query: 125 SP--EIYPGISEQRSRQIIQDFFKERR 149 + ++ G+ + + ++F+ +R Sbjct: 138 NHRVQVSGGVLAAEAGLRLTNYFRAKR 164 >gi|303320905|ref|XP_003070447.1| Cytidine and deoxycytidylate deaminase zinc-binding domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240110143|gb|EER28302.1| Cytidine and deoxycytidylate deaminase zinc-binding domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|320033053|gb|EFW15002.1| tRNA-specific adenosine deaminase subunit TAD2 [Coccidioides posadasii str. Silveira] Length = 207 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 47/139 (33%), Positives = 68/139 (48%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+ A+ A E PVG V V + K+I R N + T HAE LAI R Sbjct: 31 FMREALQMAEQALAIGETPVGCVLVHDGKVIGRGMNDTNRSLNGTRHAEFLAIEEALRSY 90 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + I DLYVT+EPC MCA+ + IRR+++G N + GG ++ Sbjct: 91 PRSIFRTTDLYVTVEPCIMCASLLRQNYIRRVFFGCVNDRFGGTGGVLNLHSDRAIDPPY 150 Query: 127 EIYPGISEQRSRQIIQDFF 145 +Y GI + +++ F+ Sbjct: 151 TVYGGIFRNEAIMLLRRFY 169 >gi|238014692|gb|ACR38381.1| unknown [Zea mays] Length = 183 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 48/112 (42%), Positives = 64/112 (57%), Gaps = 9/112 (8%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+A+ A E+PVG V V + K+IS N+ ++ T HAE+ AI + R Sbjct: 5 FMELALEQAKFALDNLEVPVGCVIVEDGKVISSGSNKTNATRNATRHAEMEAIDVLLREW 64 Query: 67 SQEIL--PEV-------DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 L P+V DLYVT EPC MCA A+S+ IR +Y+G +N K GG Sbjct: 65 QSMGLDQPQVAEKFAGCDLYVTCEPCIMCATALSIIGIREVYFGCANDKFGG 116 >gi|333025914|ref|ZP_08453978.1| putative cytidine/deoxycytidine deaminase [Streptomyces sp. Tu6071] gi|332745766|gb|EGJ76207.1| putative cytidine/deoxycytidine deaminase [Streptomyces sp. Tu6071] Length = 163 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 69/129 (53%), Gaps = 5/129 (3%) Query: 24 IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 IPVGAV + + ++RA N D TAHAE+LA+R + + L L VTLEP Sbjct: 37 IPVGAVVLDASGTELARARNEREATHDPTAHAEVLALRRAAAVRGEWRLTGCTLVVTLEP 96 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CHHSPEIYPGISEQRSRQI 140 C MCA A++ +R+ R+ YGA +PK G G+Q+ L +H E+ G+ S + Sbjct: 97 CPMCAGALTQSRVERVVYGARDPKAGAA--GSQWDLLRDRRLNHRAEVVEGVLAPESTAL 154 Query: 141 IQDFFKERR 149 + FF R Sbjct: 155 LDAFFTATR 163 >gi|325921804|ref|ZP_08183621.1| tRNA-adenosine deaminase [Xanthomonas gardneri ATCC 19865] gi|325547681|gb|EGD18718.1| tRNA-adenosine deaminase [Xanthomonas gardneri ATCC 19865] Length = 165 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 55/147 (37%), Positives = 81/147 (55%), Gaps = 6/147 (4%) Query: 7 FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL+ A+ A +EIPVGA+ V + ++ N N D TAHAEI+A+R R Sbjct: 14 WMQRALQLAERAERDYDEIPVGALLVDADGNVLGEGWNFNIASHDPTAHAEIMAMREAGR 73 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L+ L LYVTLEPC MCA A+ ARI R+ + AS+PK G G+ F LA H Sbjct: 74 RLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 131 Query: 125 SP--EIYPGISEQRSRQIIQDFFKERR 149 + ++ G+ + + ++F+ +R Sbjct: 132 NHRVQVSGGVLAAEASLRLTNYFRAKR 158 >gi|317055943|ref|YP_004104410.1| CMP/dCMP deaminase zinc-binding protein [Ruminococcus albus 7] gi|315448212|gb|ADU21776.1| CMP/dCMP deaminase zinc-binding protein [Ruminococcus albus 7] Length = 158 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 3/128 (2%) Query: 24 IPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 +PVGAV V + +I+ R NR + HAEI+AI R L L + +L+VTLE Sbjct: 24 VPVGAVVVKKSTGEIVGRGFNRREYGRSPLTHAEIVAIDEASRKLGGWRLIDCELFVTLE 83 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA A+ +R+ R+ +GA + K G + + L +H PE G+ E+ ++ Sbjct: 84 PCPMCAGAVINSRVERVVFGAYDKKAGSCGSVVDLFGLPY-NHKPECIGGVLEEECAAVL 142 Query: 142 QDFFKERR 149 +FFK R Sbjct: 143 TEFFKGLR 150 >gi|318041317|ref|ZP_07973273.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. CB0101] Length = 178 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 1/142 (0%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 ++M L A+ EIPV AV + + + NR + HAE++A++ R Sbjct: 16 LWMQRLLRRAEAVGCEGEIPVAAVVLDAQGRAVGWGSNRRERDQQPLGHAELMALQQAAR 75 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + L VTLEPC MCA A+ AR+ ++ +GA +PK GG+ T + HH Sbjct: 76 LRGDWRFNDCTLLVTLEPCPMCAGALVQARVGQVVFGAHDPKRGGLGGVLDLSTSPSAHH 135 Query: 125 SPEIYPGISEQRSRQIIQDFFK 146 S + G+ +R ++ +FK Sbjct: 136 SMLVVGGVEAERCATQLERWFK 157 >gi|240281302|gb|EER44805.1| tRNA specific adenosine deaminase [Ajellomyces capsulatus H143] Length = 197 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 64/129 (49%), Gaps = 6/129 (4%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +K FM AL+ + A E PVG V V N++ N + + T HAE LAI Sbjct: 15 QKHEYFMKKALDMGEEALASGETPVGCVLVHNDEATGSGMNDTNKSMNGTRHAEFLAIEE 74 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + I E DLYVT+EPC MCA+A+ +IR +Y+G +N + GG + Sbjct: 75 VLRNYPRSIFRETDLYVTVEPCIMCASALRQYQIRHVYFGCANERFGGTGG------VLN 128 Query: 122 CHHSPEIYP 130 H P I P Sbjct: 129 LHSDPGIDP 137 >gi|239942817|ref|ZP_04694754.1| putative deaminase [Streptomyces roseosporus NRRL 15998] gi|291446287|ref|ZP_06585677.1| deaminase [Streptomyces roseosporus NRRL 15998] gi|291349234|gb|EFE76138.1| deaminase [Streptomyces roseosporus NRRL 15998] Length = 142 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 1/126 (0%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PVGAV + + G+ RE D TAHAEILA+R + + L + L VTL Sbjct: 15 GDVPVGAVVLGPDGTELATGHNEREATGDPTAHAEILALRRAAEAVGEWRLTDCTLVVTL 74 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ +R+ R+ YGA + K G + +H PE+ G+ E+ + Sbjct: 75 EPCTMCAGALVQSRVARVVYGARDEKAGAAGSLWDVIRDRRLNHRPEVIAGVLERECAEQ 134 Query: 141 IQDFFK 146 + FF+ Sbjct: 135 LTAFFR 140 >gi|229817012|ref|ZP_04447294.1| hypothetical protein BIFANG_02267 [Bifidobacterium angulatum DSM 20098] gi|229785757|gb|EEP21871.1| hypothetical protein BIFANG_02267 [Bifidobacterium angulatum DSM 20098] Length = 147 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 71/143 (49%), Gaps = 3/143 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66 M CALE A AA ++PVGA+ + + I+ G RE+ D AHAE+ A+R Sbjct: 7 MRCALELAHRAAEHGDVPVGALVLDAHGHIAGEGWNTREVDGDPLAHAEVAAMREAAE-- 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPC MCA A I R+ +GA + K G + P Sbjct: 65 HGWNLADCTLVVTLEPCPMCAGACIQTHIGRIVFGAWDAKLGACGSVWDIPRDPHVGSVP 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y G+ E+ Q++ +FF RR Sbjct: 125 EVYGGVMERECAQVLSEFFAARR 147 >gi|254384103|ref|ZP_04999448.1| cytidine/deoxycytidine deaminase [Streptomyces sp. Mg1] gi|194342993|gb|EDX23959.1| cytidine/deoxycytidine deaminase [Streptomyces sp. Mg1] Length = 142 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 50/141 (35%), Positives = 74/141 (52%), Gaps = 1/141 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA A ++PVGAV + + ++++ N D TAHAE+LA+R L Sbjct: 1 MRLALREAARAVPAGDVPVGAVVLGPDGELLATGYNEREATGDPTAHAEVLALRRAAAAL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + LP L VTLEPC MCA A+ AR+ R+ YGA + K G + +H P Sbjct: 61 GEWRLPGCTLVVTLEPCVMCAGALVQARVARVVYGAGDEKAGAAGSLWDLVRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKE 147 E+ G+ + + + DFF++ Sbjct: 121 EVIRGVLAEECARQLTDFFRD 141 >gi|325680619|ref|ZP_08160161.1| cytidine and deoxycytidylate deaminase zinc-binding region [Ruminococcus albus 8] gi|324107689|gb|EGC01963.1| cytidine and deoxycytidylate deaminase zinc-binding region [Ruminococcus albus 8] Length = 156 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 54/151 (35%), Positives = 80/151 (52%), Gaps = 3/151 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILA 58 M + ++M ALE A AA +E+PVGAV V + +I+ R NR + HAEI+A Sbjct: 1 MTRDEMYMRKALELAALAAEEDEVPVGAVVVKKSTGEIVGRGFNRREYGRSPLTHAEIVA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I R L L + +L+VTLEPC MCA A+ +R+ R+ +GA + K G + + Sbjct: 61 IEQASRKLGGWRLIDCELFVTLEPCPMCAGAVINSRVERVVFGAYDKKAGSCGSVVDLFG 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 L +H PE G+ E+ + FF+ R Sbjct: 121 LPY-NHKPECVGGVLEEECAAALSVFFRGLR 150 >gi|139439263|ref|ZP_01772705.1| Hypothetical protein COLAER_01720 [Collinsella aerofaciens ATCC 25986] gi|133775287|gb|EBA39107.1| Hypothetical protein COLAER_01720 [Collinsella aerofaciens ATCC 25986] Length = 593 Score = 80.5 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 51/143 (35%), Positives = 78/143 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FMS AL EA+ AA E+P+GAV V +I++RA NR +D +AHAE A+ + L Sbjct: 10 FMSEALAEARAAAAVGEVPIGAVVVRAGEIVARAHNRRELDQDPSAHAEFSALCAAAQSL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + +YVTLEPC MCA + AR+ R YGA++ K G + + + +H Sbjct: 70 GRWRLSDCTVYVTLEPCCMCAGLMVNARVGRCVYGAADAKAGALGSLYDLNADSRLNHRF 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ R+++ +F R Sbjct: 130 NVRAGVLADECREVLSSYFSGLR 152 >gi|326488167|dbj|BAJ89922.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 218 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 47/112 (41%), Positives = 65/112 (58%), Gaps = 9/112 (8%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI- 65 FM AL++A+ A E+PVG V V N K+I+ NR ++ T HAE+ AI + + Sbjct: 42 FMELALDQAKFALDNLEVPVGCVIVENGKVIASGSNRTNATRNATRHAEMEAIDVLLQEW 101 Query: 66 ----LSQEILPE----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 L Q ++ E DLYVT EPC MCA+A+S+ IR +Y+G N K GG Sbjct: 102 QSIGLDQTLVAEKFAGCDLYVTCEPCIMCASALSILGIREVYFGCPNDKFGG 153 >gi|332671974|ref|YP_004454982.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas fimi ATCC 484] gi|332341012|gb|AEE47595.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas fimi ATCC 484] Length = 171 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 55/145 (37%), Positives = 81/145 (55%), Gaps = 5/145 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA+ A ++PVGAV V + ++++R N L D T HAE++A+R L Sbjct: 20 MGLALDEARRAVQSGDVPVGAVVVGPSGEVVARGHNVREALDDPTGHAEVVALRAAADRL 79 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CHH 124 + L + L VTLEPC MCA AI LAR+ RL GA +PK G G+Q+ + +H Sbjct: 80 GRWRLDDCTLVVTLEPCLMCAGAIVLARVPRLVLGAWDPKAGAC--GSQWDVVRDRRLNH 137 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ ++Q FF+ +R Sbjct: 138 RVEVVGGVRADECGLLLQHFFEAQR 162 >gi|242041093|ref|XP_002467941.1| hypothetical protein SORBIDRAFT_01g036850 [Sorghum bicolor] gi|241921795|gb|EER94939.1| hypothetical protein SORBIDRAFT_01g036850 [Sorghum bicolor] Length = 183 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 48/114 (42%), Positives = 64/114 (56%), Gaps = 9/114 (7%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM ALE+A+ A E+PVG V V + K+IS N+ ++ T HAE+ AI + R Sbjct: 3 TAFMEQALEQAKFALDNLEVPVGCVIVEDGKVISSGSNKTNATRNATRHAEMEAIDVLLR 62 Query: 65 I-----LSQEILPE----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 L Q + E DLYVT EPC MCA A+S+ IR +Y+G +N K GG Sbjct: 63 EWQSMGLDQTQVAEKFAGCDLYVTCEPCIMCATALSIIGIREVYFGCANDKFGG 116 >gi|268552503|ref|XP_002634234.1| Hypothetical protein CBG01804 [Caenorhabditis briggsae] gi|187037916|emb|CAP22833.1| hypothetical protein CBG_01804 [Caenorhabditis briggsae AF16] Length = 426 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 49/148 (33%), Positives = 85/148 (57%), Gaps = 8/148 (5%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +F+ A A+ A ++E+PVG V V++ + I R NR E D T HAE++A+ Sbjct: 11 IFLEQAFTLAEEALNQDEVPVGCVFVVDGEEIGRGRNRVNETGDPTRHAEMVAVTEIWSK 70 Query: 66 LSQE---ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN--GTQFYTLA 120 +E +L + LYV+LEPC MC++A+ IR++ YGA NP+ GG+ + + Y Sbjct: 71 YGEESNNLLKKSVLYVSLEPCIMCSSAMYQLGIRKMVYGAENPRFGGVRSVGSAEKYRE- 129 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKER 148 ++ EI G+ +RS +++ F++++ Sbjct: 130 --ENNIEIVAGVWAERSVGMLKAFYEKQ 155 >gi|303277403|ref|XP_003057995.1| cytidine/deoxycytidylate deaminase family protein [Micromonas pusilla CCMP1545] gi|226460652|gb|EEH57946.1| cytidine/deoxycytidylate deaminase family protein [Micromonas pusilla CCMP1545] Length = 201 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 49/105 (46%), Positives = 63/105 (60%), Gaps = 3/105 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGC-R 64 MS A+EEA+ A+ R E+PVGAV V ++++ N E D TAHAE+ IR G R Sbjct: 1 MSLAIEEAKLASRRLEVPVGAVLVRASTGEVLASHHNTVDEEDDPTAHAELKCIRDGAKR 60 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 + L E LYVTLEPC MCA A+ AR+ + +GA NP GG Sbjct: 61 LGGWRYLAETTLYVTLEPCPMCAGAVLNARLGEVVWGAPNPLIGG 105 >gi|237831707|ref|XP_002365151.1| tRNA-specific adenosine deaminase, putative [Toxoplasma gondii ME49] gi|211962815|gb|EEA98010.1| tRNA-specific adenosine deaminase, putative [Toxoplasma gondii ME49] gi|221487001|gb|EEE25247.1| tRNA-specific adenosine deaminase, putative [Toxoplasma gondii GT1] gi|221506684|gb|EEE32301.1| tRNA-specific adenosine deaminase, putative [Toxoplasma gondii VEG] Length = 178 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 12/152 (7%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGC 63 +FMS ALEEA+ A E+PVG V V + +++SR N K+ T H E+ A+ Sbjct: 11 LFMSAALEEARLALKEGEVPVGCVLVDSKTRQVVSRGRNATNRTKNATRHCELEALDAYM 70 Query: 64 RILS---------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 +L + L +DL+VT EPC MCA A+ + ++R++YG N + GG + Sbjct: 71 ALLPPPNIGGVEPRVDLSSIDLFVTCEPCVMCAVALQCSGVKRVFYGCGNDRFGGCGSVL 130 Query: 115 QFYT-LATCHHSPEIYPGISEQRSRQIIQDFF 145 F+ L+ E Y GI + + +++ F+ Sbjct: 131 SFHKRLSEQWKGLECYSGIFREEAIDLLRSFY 162 >gi|227502417|ref|ZP_03932466.1| nucleoside deaminase [Corynebacterium accolens ATCC 49725] gi|306834972|ref|ZP_07468023.1| tRNA-specific adenosine deaminase [Corynebacterium accolens ATCC 49726] gi|227076786|gb|EEI14749.1| nucleoside deaminase [Corynebacterium accolens ATCC 49725] gi|304569138|gb|EFM44652.1| tRNA-specific adenosine deaminase [Corynebacterium accolens ATCC 49726] Length = 147 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/130 (36%), Positives = 67/130 (51%), Gaps = 2/130 (1%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79 ++PVGAV + ++ NR +L+D TAHAEI AIR RI L +L VT Sbjct: 14 GDVPVGAVLYDATGRELATGVNRREQLRDPTAHAEIEAIRQAVRIHGDGWRLIGCELVVT 73 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA A+ ARI L +GA PK G + T +P++ G+ E+ Sbjct: 74 LEPCAMCAGALQAARISSLVFGAFEPKTGACGSLVDVLRAPTAPFTPQVRGGVLEEDCVA 133 Query: 140 IIQDFFKERR 149 +++ FF R Sbjct: 134 LLEKFFTTLR 143 >gi|227549638|ref|ZP_03979687.1| nucleoside deaminase [Corynebacterium lipophiloflavum DSM 44291] gi|227078294|gb|EEI16257.1| nucleoside deaminase [Corynebacterium lipophiloflavum DSM 44291] Length = 177 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/145 (37%), Positives = 74/145 (51%), Gaps = 6/145 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ ALE A+ ++PVGAV + + NR D TAHAE+ A+R R L Sbjct: 9 MARALEVARTTP-PGDVPVGAVIYDALGREVGHGVNRREASGDPTAHAEVEALRAAARTL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +L VTLEPCTMCA AI AR+R L +GA PK G + G+ F L H Sbjct: 68 GAWRLDGCELVVTLEPCTMCAGAILGARVRSLVFGAFEPKTGAV--GSLFDALRDPRHLH 125 Query: 127 --EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E ++ +FF + R Sbjct: 126 IVEVRAGVREAECAALLTEFFADLR 150 >gi|195349159|ref|XP_002041114.1| GM15219 [Drosophila sechellia] gi|194122719|gb|EDW44762.1| GM15219 [Drosophila sechellia] Length = 160 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 9/146 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL---AIRMGC 63 FM AL EA+ A E+PVG V V K+++R GN ++ T HAE + AI C Sbjct: 4 FMEEALVEARRARDAGEVPVGCVFVHGGKVVARGGNEVNVHRNATRHAEFICIDAILATC 63 Query: 64 R---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + ++++ E+ + VT+EPC MC+AA+ ++ + YG N + GG T A Sbjct: 64 REKRLPARQLFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVAA 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 H EI G+ + ++++F+K Sbjct: 121 VVGHRIEITGGVRADEAMALLKEFYK 146 >gi|77736501|ref|NP_001029952.1| tRNA-specific adenosine deaminase 2 [Bos taurus] gi|75057795|sp|Q5E9J7|ADAT2_BOVIN RecName: Full=tRNA-specific adenosine deaminase 2; AltName: Full=Deaminase domain-containing protein 1; AltName: Full=tRNA-specific adenosine-34 deaminase subunit ADAT2 gi|59858211|gb|AAX08940.1| deaminase domain containing 1 [Bos taurus] gi|296483948|gb|DAA26063.1| tRNA-specific adenosine deaminase 2 [Bos taurus] Length = 191 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 8/149 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG---C 63 +M A++ A++A E+PVG + V NN+++ + N + K+ T HAE++AI C Sbjct: 25 WMEQAMQMAKDALDNTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQALDWC 84 Query: 64 RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118 R + E+ LYVT+EPC MCAAA+ L RI + YG N + GG + + Sbjct: 85 RRRGRSPSEVFEHTVLYVTVEPCIMCAAALRLMRIPLVVYGCQNERFGGCGSVLDIASAD 144 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + + PG + + ++++ F+K+ Sbjct: 145 LPSTGKPFQCTPGYRAEEAVEMLKTFYKQ 173 >gi|66806365|ref|XP_636905.1| adenosine deaminase, tRNA-specific [Dictyostelium discoideum AX4] gi|60465302|gb|EAL63394.1| adenosine deaminase, tRNA-specific [Dictyostelium discoideum AX4] Length = 254 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 10/117 (8%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI------- 59 FM A+EE A E+PV V V +II+R N+ K+ T HAE+ A Sbjct: 50 FMEAAIEEGYKALKEGEVPVACVIVYKGEIIARGSNKTNIKKNGTRHAELEAFDQIFLNK 109 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + R +L E DLYVT+EPC MC+ A+ +I+R+++G N K GG NG+ + Sbjct: 110 ELNDR-FKDSLLEECDLYVTVEPCLMCSVALQFCKIKRVFFGCHNDKFGG--NGSVY 163 >gi|195391484|ref|XP_002054390.1| GJ24425 [Drosophila virilis] gi|194152476|gb|EDW67910.1| GJ24425 [Drosophila virilis] Length = 160 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 9/146 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC--- 63 FM AL EA+ A E+PVG V V N+K+I+R GN ++ T HAE + I Sbjct: 4 FMEDALVEARRARDAGEVPVGCVFVHNDKVIARGGNEVNVHRNATRHAEFICIDATLAYC 63 Query: 64 ---RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R+ ++++ E+ + VT+EPC MC+AA+ ++ + YG N + GG T A Sbjct: 64 REKRLPARQVFSEISVVVTVEPCIMCSAALHTLAVKEIIYGCENDRFGG---KTVIDVAA 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 I G+ + + ++++F+K Sbjct: 121 VVGQRINITGGVRSEEAMALLKEFYK 146 >gi|239989276|ref|ZP_04709940.1| putative deaminase [Streptomyces roseosporus NRRL 11379] Length = 174 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 1/126 (0%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PVGAV + + G+ RE D TAHAEILA+R + + L + L VTL Sbjct: 47 GDVPVGAVVLGPDGTELATGHNEREATGDPTAHAEILALRRAAEAVGEWRLTDCTLVVTL 106 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ +R+ R+ YGA + K G + +H PE+ G+ E+ + Sbjct: 107 EPCTMCAGALVQSRVARVVYGARDEKAGAAGSLWDVIRDRRLNHRPEVIAGVLERECAEQ 166 Query: 141 IQDFFK 146 + FF+ Sbjct: 167 LTAFFR 172 >gi|118464690|ref|YP_879612.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium avium 104] gi|254773334|ref|ZP_05214850.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118165977|gb|ABK66874.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium avium 104] Length = 152 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 77/145 (53%), Gaps = 3/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + AL A A R+ +P+GAV V + ++RA N L D TAHAEILA+R Sbjct: 7 LIRSALAVAATAGPRD-VPIGAVVVGADGTELARAVNAREALGDPTAHAEILALRAAAAA 65 Query: 66 LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L L VT+EPCTMCA A+ LARI RL +GA PK G + + +H Sbjct: 66 LGDGWRLEGATLAVTVEPCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVRDRRLNH 125 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 PE+ G+ E+ +++ FF +R Sbjct: 126 RPEVRGGVLERECAALLEGFFARQR 150 >gi|78779266|ref|YP_397378.1| tRNA-adenosine deaminase [Prochlorococcus marinus str. MIT 9312] gi|78712765|gb|ABB49942.1| tRNA-adenosine deaminase [Prochlorococcus marinus str. MIT 9312] Length = 171 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 1/128 (0%) Query: 23 EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+P+ ++ + + I R NR KD HAEI+A+R I + E LE Sbjct: 41 ELPISSIILDERGRCIGRGVNRRSVNKDPLGHAEIMALRQASLIKNDWRFNECITITNLE 100 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PCTMCA+A+ AR+ ++ +GA + K GG+ + HH EI GI E+ QI+ Sbjct: 101 PCTMCASALIQARMGKVVFGAYDKKRGGLGGSIDLSKHKSSHHKMEIVGGILEEECSQIL 160 Query: 142 QDFFKERR 149 Q +FK+ R Sbjct: 161 QLWFKKLR 168 >gi|15610888|ref|NP_218269.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis H37Rv] gi|15843372|ref|NP_338409.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium tuberculosis CDC1551] gi|31794922|ref|NP_857415.1| cytidine/deoxycytidylate deaminase [Mycobacterium bovis AF2122/97] gi|121639666|ref|YP_979890.1| putative cytidine/deoxycytidylate deaminase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663618|ref|YP_001285141.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium tuberculosis H37Ra] gi|148824957|ref|YP_001289711.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis F11] gi|167970913|ref|ZP_02553190.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis H37Ra] gi|215405807|ref|ZP_03417988.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis 02_1987] gi|215413680|ref|ZP_03422348.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis 94_M4241A] gi|215424998|ref|ZP_03422917.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T92] gi|215448096|ref|ZP_03434848.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T85] gi|218755535|ref|ZP_03534331.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis GM 1503] gi|219559836|ref|ZP_03538912.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T17] gi|224992162|ref|YP_002646851.1| putative cytidine/deoxycytidylate deaminase [Mycobacterium bovis BCG str. Tokyo 172] gi|253800799|ref|YP_003033800.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN 1435] gi|254366297|ref|ZP_04982341.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis str. Haarlem] gi|254552866|ref|ZP_05143313.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260184675|ref|ZP_05762149.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis CPHL_A] gi|260198800|ref|ZP_05766291.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T46] gi|260202955|ref|ZP_05770446.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis K85] gi|289441188|ref|ZP_06430932.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T46] gi|289445351|ref|ZP_06435095.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis CPHL_A] gi|289556017|ref|ZP_06445227.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN 605] gi|289571998|ref|ZP_06452225.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T17] gi|289572402|ref|ZP_06452629.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis K85] gi|289747592|ref|ZP_06506970.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis 02_1987] gi|289748271|ref|ZP_06507649.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T92] gi|289759914|ref|ZP_06519292.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T85] gi|289763934|ref|ZP_06523312.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis GM 1503] gi|294995336|ref|ZP_06801027.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis 210] gi|297636433|ref|ZP_06954213.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN 4207] gi|297733427|ref|ZP_06962545.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN R506] gi|298527225|ref|ZP_07014634.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis 94_M4241A] gi|306778112|ref|ZP_07416449.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu001] gi|306778644|ref|ZP_07416981.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu002] gi|306786666|ref|ZP_07424988.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu003] gi|306791033|ref|ZP_07429355.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu004] gi|306791352|ref|ZP_07429654.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu005] gi|306795417|ref|ZP_07433719.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu006] gi|306801392|ref|ZP_07438060.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu008] gi|306805598|ref|ZP_07442266.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu007] gi|306969995|ref|ZP_07482656.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu009] gi|306974229|ref|ZP_07486890.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu010] gi|307081937|ref|ZP_07491107.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu011] gi|307086550|ref|ZP_07495663.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu012] gi|313660758|ref|ZP_07817638.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN V2475] gi|2960176|emb|CAA18074.1| POSSIBLE CYTIDINE/DEOXYCYTIDYLATE DEAMINASE [Mycobacterium tuberculosis H37Rv] gi|13883737|gb|AAK48223.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium tuberculosis CDC1551] gi|31620520|emb|CAD95964.1| POSSIBLE CYTIDINE/DEOXYCYTIDYLATE DEAMINASE [Mycobacterium bovis AF2122/97] gi|121495314|emb|CAL73801.1| Possible cytidine/deoxycytidylate deaminase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134151809|gb|EBA43854.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis str. Haarlem] gi|148507770|gb|ABQ75579.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium tuberculosis H37Ra] gi|148723484|gb|ABR08109.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis F11] gi|224775277|dbj|BAH28083.1| putative cytidine/deoxycytidylate deaminase [Mycobacterium bovis BCG str. Tokyo 172] gi|253322302|gb|ACT26905.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN 1435] gi|289414107|gb|EFD11347.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T46] gi|289418309|gb|EFD15510.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis CPHL_A] gi|289440649|gb|EFD23142.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN 605] gi|289536833|gb|EFD41411.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis K85] gi|289545752|gb|EFD49400.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T17] gi|289688120|gb|EFD55608.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis 02_1987] gi|289688858|gb|EFD56287.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T92] gi|289711440|gb|EFD75456.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis GM 1503] gi|289715478|gb|EFD79490.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T85] gi|298497019|gb|EFI32313.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis 94_M4241A] gi|308213634|gb|EFO73033.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu001] gi|308328367|gb|EFP17218.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu002] gi|308328772|gb|EFP17623.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu003] gi|308332614|gb|EFP21465.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu004] gi|308340105|gb|EFP28956.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu005] gi|308344093|gb|EFP32944.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu006] gi|308347895|gb|EFP36746.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu007] gi|308351763|gb|EFP40614.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu008] gi|308352546|gb|EFP41397.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu009] gi|308356497|gb|EFP45348.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu010] gi|308360445|gb|EFP49296.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu011] gi|308364027|gb|EFP52878.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu012] gi|323717617|gb|EGB26819.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis CDC1551A] gi|326905590|gb|EGE52523.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis W-148] gi|328460526|gb|AEB05949.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN 4207] Length = 152 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 1/114 (0%) Query: 37 ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTLEPCTMCAAAISLARI 95 ++RA N L D TAHAEILA+R+ +L L L VT+EPCTMCA A+ LAR+ Sbjct: 37 LARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARV 96 Query: 96 RRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 RL +GA PK G + + +H PE+ G+ + ++ FF +R Sbjct: 97 ARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAPLEAFFARQR 150 >gi|308802662|ref|XP_003078644.1| putative deaminase (ISS) [Ostreococcus tauri] gi|116057097|emb|CAL51524.1| putative deaminase (ISS) [Ostreococcus tauri] Length = 247 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/161 (35%), Positives = 83/161 (51%), Gaps = 21/161 (13%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M ALE A+ R E+P+GAV V N+ ++++ N D TAHAE+ AIRMG Sbjct: 75 MRRALEIARFGGARGEVPIGAVIVENDTGRVVAACANACERDGDPTAHAELRAIRMGAET 134 Query: 66 L-SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL----- 119 L + L + +YVTLEPC MCA I AR+ R+ YGA N G +G+ L Sbjct: 135 LGNWRHLRKTTMYVTLEPCAMCAGGILQARVGRVVYGAKNALLGA--DGSWVSVLRKSDA 192 Query: 120 -------ATCHH--SP--EIYPGISEQRSRQIIQDFFKERR 149 T H SP ++ G+ + + ++++FF+ RR Sbjct: 193 VDESAATTTRPHAFSPDLDVTGGVLAEETGALMKEFFRARR 233 >gi|257138794|ref|ZP_05587056.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia thailandensis E264] Length = 187 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 69/126 (54%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I+R N D +AHAE+ A+R R L +P +LYVTLEPC Sbjct: 42 VPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLEPC 101 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MC+ AI ARI R+ +GA +PK G + + A +H + G+ ++ Sbjct: 102 LMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAALKS 161 Query: 144 FFKERR 149 FF ERR Sbjct: 162 FFAERR 167 >gi|125975000|ref|YP_001038910.1| guanine deaminase [Clostridium thermocellum ATCC 27405] gi|256005114|ref|ZP_05430084.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum DSM 2360] gi|281418582|ref|ZP_06249601.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum JW20] gi|125715225|gb|ABN53717.1| Guanine deaminase [Clostridium thermocellum ATCC 27405] gi|255990965|gb|EEU01077.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum DSM 2360] gi|281407666|gb|EFB37925.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum JW20] gi|316939161|gb|ADU73195.1| CMP/dCMP deaminase zinc-binding protein [Clostridium thermocellum DSM 1313] Length = 154 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 1/105 (0%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A++EA + +N P GAV V +N+II+RA N + D T HAE++AIR + Sbjct: 4 FMKEAVKEAVSGMRQNHGGPFGAVIVKDNEIIARAHNEVIKNNDPTDHAEMIAIRKAAKK 63 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 LS+ L + +LY + EPC MC AAI A+I+++YYG + I Sbjct: 64 LSRFDLGDCELYSSCEPCPMCFAAIHWAKIKKVYYGCTREDAAKI 108 >gi|21242782|ref|NP_642364.1| hypothetical protein XAC2038 [Xanthomonas axonopodis pv. citri str. 306] gi|21108264|gb|AAM36900.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 169 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/147 (37%), Positives = 81/147 (55%), Gaps = 6/147 (4%) Query: 7 FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL+ A+ A +EIPVGAV V ++ N N D +AHAEI+A+R R Sbjct: 18 WMQHALQLAERAERDYDEIPVGAVLVDAQGNVLGEGWNFNIASHDPSAHAEIVAMREAGR 77 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L+ L LYVTLEPC MCA A+ ARI R+ + AS+PK G G+ F LA H Sbjct: 78 RLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 135 Query: 125 SP--EIYPGISEQRSRQIIQDFFKERR 149 + ++ G+ ++ + ++F+ +R Sbjct: 136 NHRVQVCGGVLAAQASLRLTNYFRAKR 162 >gi|167836996|ref|ZP_02463879.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia thailandensis MSMB43] Length = 194 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 69/126 (54%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I+R N D +AHAE+ A+R R L +P +LYVTLEPC Sbjct: 49 VPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLEPC 108 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MC+ AI ARI R+ +GA +PK G + + A +H + G+ ++ Sbjct: 109 LMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAALKS 168 Query: 144 FFKERR 149 FF ERR Sbjct: 169 FFAERR 174 >gi|296090277|emb|CBI40096.3| unnamed protein product [Vitis vinifera] Length = 205 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/115 (40%), Positives = 66/115 (57%), Gaps = 15/115 (13%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+++A+ A E+PVG V V + K+I+ NR E ++ T HAE+ AI + +L Sbjct: 30 FMELAIQQAKLALDSLEVPVGCVIVEDGKLIATGRNRTTETRNATRHAEMEAIDV---LL 86 Query: 67 SQ------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 Q EI + LYVT EPC MCAA++S+ I+ +YYG +N K GG Sbjct: 87 EQWQKNGLSKLEVAEIFSKCSLYVTCEPCIMCAASLSILGIKEVYYGCANDKFGG 141 >gi|23097839|ref|NP_691305.1| hypothetical protein OB0384 [Oceanobacillus iheyensis HTE831] gi|22776063|dbj|BAC12340.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 159 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/105 (41%), Positives = 57/105 (54%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FMS A+E A + + P GAV + +NKII+ N+ D TAHAE+ AIR C Sbjct: 9 LFMSKAIELAVSNISQGGGPFGAVIIKDNKIIAEGTNQVTNYNDPTAHAEVQAIRQACEK 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 LS L LY + EPC MC AI AR+ +YYGA+ I Sbjct: 69 LSTFELKGCTLYTSCEPCPMCLGAIYWARVDAVYYGANRKDAAKI 113 >gi|299138415|ref|ZP_07031594.1| CMP/dCMP deaminase zinc-binding [Acidobacterium sp. MP5ACTX8] gi|298599661|gb|EFI55820.1| CMP/dCMP deaminase zinc-binding [Acidobacterium sp. MP5ACTX8] Length = 182 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 67/131 (51%), Gaps = 5/131 (3%) Query: 24 IPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE--ILPE--VDLYV 78 +PVGA+ V +I+SR N+ D TAHAEI+A+R L + PE LY Sbjct: 29 VPVGAIIVSPTGEIVSRGNNQVLRTNDPTAHAEIVALRAAGLALDNYRLLTPEGGCTLYC 88 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 TLEPC MCA AI ARI RL + A +PK G + +H E+ I + Sbjct: 89 TLEPCAMCAGAILHARIARLVFAARDPKAGACGSVLSVMNHPALNHRVEVVESILTEECS 148 Query: 139 QIIQDFFKERR 149 ++ +FF+ RR Sbjct: 149 AMLTNFFRARR 159 >gi|294625308|ref|ZP_06703945.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665062|ref|ZP_06730368.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600377|gb|EFF44477.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605180|gb|EFF48525.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 169 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 6/147 (4%) Query: 7 FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL+ A+ A +EIPVGAV V ++ N N D +AHAEI+A+R R Sbjct: 18 WMQHALQLAERAERDYDEIPVGAVLVDAQGNVLGEGWNFNIASHDPSAHAEIVAMREAGR 77 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L+ L LYVTLEPC MCA A+ ARI R+ + AS+PK G G+ F LA H Sbjct: 78 RLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 135 Query: 125 SP--EIYPGISEQRSRQIIQDFFKERR 149 + ++ G+ + + ++F+ +R Sbjct: 136 NHRVQVSGGVLAAEASLRLTNYFRAKR 162 >gi|269955016|ref|YP_003324805.1| CMP/dCMP deaminase zinc-binding protein [Xylanimonas cellulosilytica DSM 15894] gi|269303697|gb|ACZ29247.1| CMP/dCMP deaminase zinc-binding protein [Xylanimonas cellulosilytica DSM 15894] Length = 190 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 1/146 (0%) Query: 5 NVFMSCALEEAQNA-ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + M AL EA +A A + V + +++ NR E D TAHAE+LA+R Sbjct: 42 DALMGMALHEATHALASGDVPVGAVVVGPDGRLLGTGRNRREETGDPTAHAEVLALRQAA 101 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L L VTLEPC MCA A+ AR+ RL GA +PK G + + Sbjct: 102 LSRREWRLEGCTLVVTLEPCVMCAGALVAARVHRLVIGAWDPKAGATGSVWDLVRDQRAN 161 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H+ E+ G+ E +++ FF+ R Sbjct: 162 HAVEVVGGVREHECGAMLRAFFESHR 187 >gi|225352824|ref|ZP_03743847.1| hypothetical protein BIFPSEUDO_04457 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156335|gb|EEG69904.1| hypothetical protein BIFPSEUDO_04457 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 149 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 69/143 (48%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66 M A+E A+ AA E+PVGAV + + +G RE D AHAE+ A+ R L Sbjct: 7 MELAIELAREAAAEGEVPVGAVVLDAGGAVIGSGRNLREAHADPLAHAEVKAMTQAARSL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPC MCA A + R+ +GA + K G + H P Sbjct: 67 GTWNLADCTLIVTLEPCPMCAGACLQTHVGRIVFGAWDAKLGACGSIWDIPRDPHVGHVP 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E +++ DFF +R Sbjct: 127 EVIGGVRESECARLMTDFFAGKR 149 >gi|167619629|ref|ZP_02388260.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia thailandensis Bt4] Length = 194 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 69/126 (54%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I+R N D +AHAE+ A+R R L +P +LYVTLEPC Sbjct: 49 VPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLEPC 108 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MC+ AI ARI R+ +GA +PK G + + A +H + G+ ++ Sbjct: 109 LMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAALKS 168 Query: 144 FFKERR 149 FF ERR Sbjct: 169 FFAERR 174 >gi|83719984|ref|YP_442586.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia thailandensis E264] gi|83653809|gb|ABC37872.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia thailandensis E264] Length = 194 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 69/126 (54%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I+R N D +AHAE+ A+R R L +P +LYVTLEPC Sbjct: 49 VPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLEPC 108 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MC+ AI ARI R+ +GA +PK G + + A +H + G+ ++ Sbjct: 109 LMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAALKS 168 Query: 144 FFKERR 149 FF ERR Sbjct: 169 FFAERR 174 >gi|194900476|ref|XP_001979783.1| GG22115 [Drosophila erecta] gi|190651486|gb|EDV48741.1| GG22115 [Drosophila erecta] Length = 160 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 9/146 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL---AIRMGC 63 FM AL EA+ A E+PVG V V K+++R GN ++ T HAE + AI C Sbjct: 4 FMEEALVEARRARDAGEVPVGCVFVHGGKVVARGGNEVNVHRNATRHAEFICIDAILASC 63 Query: 64 R---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + ++++ E+ + VT+EPC MC+AA+ ++ + YG N + GG T A Sbjct: 64 RERRLPARQLFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVAA 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 EI G+ + +++DF+K Sbjct: 121 VVGQRIEITGGVRADEAMALLKDFYK 146 >gi|289704736|ref|ZP_06501159.1| cytidine and deoxycytidylate deaminase zinc-binding region [Micrococcus luteus SK58] gi|289558546|gb|EFD51814.1| cytidine and deoxycytidylate deaminase zinc-binding region [Micrococcus luteus SK58] Length = 168 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 7/134 (5%) Query: 23 EIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI------LPEVD 75 ++P+GA V + +++ GN + D TAHAE+LA+R G + + L + Sbjct: 34 DVPIGAALVAGDGTVLAVVGNEREQHHDPTAHAEVLALRRGAELRAAAGAGDGWRLTDCT 93 Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 L VTLEPC MCA A+ LARI R+ +GA +PK G + +H ++ G+ + Sbjct: 94 LVVTLEPCPMCAGALLLARIPRVVFGAWDPKAGACGSVLDVVRDPRFNHQVQVRAGVRSE 153 Query: 136 RSRQIIQDFFKERR 149 S +++ FF +R Sbjct: 154 ESAALLRGFFAAQR 167 >gi|262183239|ref|ZP_06042660.1| hypothetical protein CaurA7_04544 [Corynebacterium aurimucosum ATCC 700975] Length = 147 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/141 (35%), Positives = 72/141 (51%), Gaps = 3/141 (2%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 ALE A+ + +IPVGAV + ++ NR +L D TAHAE+ AIR R+ Sbjct: 4 ALEVARTTPV-GDIPVGAVLYDASGNELATGVNRREQLNDPTAHAEVEAIRQAVRVHGDG 62 Query: 70 I-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 L +L VTLEPC MCA AI +R+ + +GA PK G + + H PE+ Sbjct: 63 WRLEGCELVVTLEPCAMCAGAIQASRVSSVVFGAFEPKTGACGSLVEVLRAPGALHVPEV 122 Query: 129 YPGISEQRSRQIIQDFFKERR 149 G+ E+ +++ FF R Sbjct: 123 RSGVLEEECAELLTGFFGGLR 143 >gi|94676768|ref|YP_588482.1| cytidine/deoxycytidylate deaminase family protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219918|gb|ABF14077.1| cytidine/deoxycytidylate deaminase family protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 158 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 65/129 (50%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 + E+PVGA+ VL K I N + D TAHAEILA+R G + + + +YVTL Sbjct: 14 KGEVPVGAILVLEGKKIGEGLNSSIHYHDPTAHAEILALRQGGKTIGNYRITGAVMYVTL 73 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MC A+ ARI R+ +GA K + + +H+ + P I + Sbjct: 74 EPCLMCIGAMIHARISRIAFGAKAVKNNEMSLCLSVLSSTQINHNITLCPNILAEACSLQ 133 Query: 141 IQDFFKERR 149 + FFK +R Sbjct: 134 LSTFFKRKR 142 >gi|323697968|ref|ZP_08109880.1| CMP/dCMP deaminase, zinc-binding [Desulfovibrio sp. ND132] gi|323457900|gb|EGB13765.1| CMP/dCMP deaminase, zinc-binding [Desulfovibrio desulfuricans ND132] Length = 144 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 68/143 (47%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A EA AA E PVGA +++ A NR D T HAEIL +R R+L Sbjct: 1 MDVAFGEACKAAQAGEAPVGAALFTPTGTLLASAHNRPIAAHDPTGHAEILCLREAARVL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP+ L VTLEPC MC A+ AR+ + + A + + G + + Q L +H Sbjct: 61 RNYRLPDTILAVTLEPCLMCTGALIHARVAGVVFAARDERAGALVSNMQGCALPFTNHRL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ +++ FF ERR Sbjct: 121 WTVEGVMGNECSALLKRFFLERR 143 >gi|156186022|gb|ABU55329.1| cytidine and deoxycytidylate deaminase family protein [Callosobruchus chinensis] Length = 71 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%) Query: 34 NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93 + ++S A N + D TAHAE+LAI+ C +LS L + D+YVTLEPC MCA AIS A Sbjct: 3 SNVVSSAHNISN---DPTAHAEMLAIKQECELLSTSTLYDSDIYVTLEPCPMCAQAISFA 59 Query: 94 RIRRLYYGASNP 105 I+R Y+GA NP Sbjct: 60 GIKRFYFGAYNP 71 >gi|291515557|emb|CBK64767.1| Cytosine/adenosine deaminases [Alistipes shahii WAL 8301] Length = 148 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/139 (38%), Positives = 74/139 (53%), Gaps = 5/139 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EAQ A + E+P+GAV V +I R N L D TAHAE+ A+ L Sbjct: 10 FMRLALNEAQKALKQQEVPIGAVVVAGGAVIGRGHNLVETLADPTAHAEMQALTAAAATL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L E LYVT+EPC MCA AI A++ R+ +GA +PK G + Y+ A H Sbjct: 70 GGKYLQECTLYVTVEPCIMCAGAIGWAQVSRVVWGADDPK-----KGFRRYSEAVFHPRT 124 Query: 127 EIYPGISEQRSRQIIQDFF 145 + G+ + +++ FF Sbjct: 125 TVARGVLREECEELMSGFF 143 >gi|145511355|ref|XP_001441605.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124408855|emb|CAK74208.1| unnamed protein product [Paramecium tetraurelia] Length = 158 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 14/143 (9%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M ALE+A+ E+PVG V V N KI+ +A N + K+ T H EI+ I R Sbjct: 11 YMKMALEQAELGRQNKEVPVGCVIVNRNDGKIVEKAYNNTNKSKNATQHCEIICINRMNR 70 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L IL +VT EPC MC A++ +I +YYG +N + GG NG T+ + + Sbjct: 71 DLEDCIL-----FVTCEPCIMCGQALNYVKIHSVYYGCNNSRFGG--NG----TVLSLNK 119 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 P + G E +I+QDF++E Sbjct: 120 YPS-FGGHLEYDCMKILQDFYEE 141 >gi|326772679|ref|ZP_08231963.1| cytidine and deoxycytidylate deaminase family protein [Actinomyces viscosus C505] gi|326637311|gb|EGE38213.1| cytidine and deoxycytidylate deaminase family protein [Actinomyces viscosus C505] Length = 196 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/141 (40%), Positives = 76/141 (53%), Gaps = 3/141 (2%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 ALE A+ A E+PVGAV VL+ + +++ A N D TAHAEI A+R L Sbjct: 57 ALELARAAGEAGEVPVGAV-VLSPEGVVLAEAANAREAEHDPTAHAEIRALRAAGAALGD 115 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 L L VTLEPCTMCA AI LAR+ RL GA P+ G + +H E+ Sbjct: 116 SHLDGCTLVVTLEPCTMCAGAIVLARVARLVLGAWEPRTGACGSVRDVVRDTRANHQVEV 175 Query: 129 YPGISEQRSRQIIQDFFKERR 149 G+ Q S++++ FF +RR Sbjct: 176 RAGLRAQESQELLTAFFADRR 196 >gi|329948029|ref|ZP_08294930.1| cytidine and deoxycytidylate deaminase zinc-binding region [Actinomyces sp. oral taxon 170 str. F0386] gi|328523168|gb|EGF50269.1| cytidine and deoxycytidylate deaminase zinc-binding region [Actinomyces sp. oral taxon 170 str. F0386] Length = 143 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 66/129 (51%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV + +++ A N D TAHAEI A+R L L L VTL Sbjct: 15 GEVPVGAVVLSPEGTVLAEAANAREAQHDPTAHAEIRALRAAGAALGDSHLDGCTLVVTL 74 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA AI LAR+ RL GA P+ G + A +H E+ G+ + S+ + Sbjct: 75 EPCTMCAGAIVLARVARLVLGAWEPRTGACGSVRDVVRDARANHQVEVRAGLRARESQDL 134 Query: 141 IQDFFKERR 149 + FF RR Sbjct: 135 LTAFFSGRR 143 >gi|326385119|ref|ZP_08206788.1| cytidine/deoxycytidylate deaminase family protein [Gordonia neofelifaecis NRRL B-59395] gi|326196152|gb|EGD53357.1| cytidine/deoxycytidylate deaminase family protein [Gordonia neofelifaecis NRRL B-59395] Length = 154 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 49/128 (38%), Positives = 68/128 (53%), Gaps = 2/128 (1%) Query: 24 IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTLE 81 +P+GAV + + ++RA NR D TAHAEILA+R L + L VT+E Sbjct: 24 VPIGAVVFGPDGRELARAANRREADADPTAHAEILALRAAAARHGDGWRLSDCTLAVTVE 83 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PCTMCA AI LARI R+ +GA PK G + + + PE+ G+ E ++ Sbjct: 84 PCTMCAGAIGLARISRVVFGAWEPKTGAVGSLWDVLRDPRQMYRPEVLAGVREDECAALV 143 Query: 142 QDFFKERR 149 +DFF R Sbjct: 144 RDFFAAHR 151 >gi|152964439|ref|YP_001360223.1| CMP/dCMP deaminase zinc-binding [Kineococcus radiotolerans SRS30216] gi|151358956|gb|ABS01959.1| CMP/dCMP deaminase zinc-binding [Kineococcus radiotolerans SRS30216] Length = 144 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 71/143 (49%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66 M AL+EA+ ++PVGAV V + AG RE D TAHAE+LA+R R Sbjct: 1 MGLALDEARACLATGDVPVGAVVVDAAGTVLGAGRNEREAAGDPTAHAEVLALRAAARAR 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPC MCA A LAR+ RL GA +P+ G + A +H Sbjct: 61 GEWRLTGCTLVVTLEPCVMCAGATVLARVDRLVLGAWDPRFGAAGSLRDVVRDARLNHVV 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ + R ++ FF RR Sbjct: 121 EVAGDVRGAECRALLDGFFAARR 143 >gi|283851075|ref|ZP_06368359.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio sp. FW1012B] gi|283573471|gb|EFC21447.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio sp. FW1012B] Length = 181 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 1/126 (0%) Query: 25 PVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 PVGAV + +++++ GN D TAHAEILA+R + LP L VTLEPC Sbjct: 47 PVGAVLLSGAGEVLAQTGNGPISRADPTAHAEILALRQAAARVGNYRLPGSILVVTLEPC 106 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MC A+ AR+ L YGA +P+ G +++ L +H ++ G+ S +++ Sbjct: 107 LMCLGAMIHARVGLLVYGAPDPRTGAVDSRLPGPDLPFFNHRFDVLSGVCADASAALLRQ 166 Query: 144 FFKERR 149 FF+ RR Sbjct: 167 FFRNRR 172 >gi|255626047|gb|ACU13368.1| unknown [Glycine max] Length = 170 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 1/99 (1%) Query: 5 NVFMSCALEEAQNAALRNE-IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 N F++ A+EEA A P GAV V N++I+S N D TAHAEI AIR C Sbjct: 16 NKFLTMAIEEAYKAVESGHGRPFGAVIVRNDEILSSCHNMVVRNADPTAHAEITAIREAC 75 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 R L+Q L + ++Y + EPC MC +AI ++I++L YGA Sbjct: 76 RKLNQVELADSEIYASCEPCPMCLSAIHFSKIKKLVYGA 114 >gi|239916882|ref|YP_002956440.1| tRNA-adenosine deaminase [Micrococcus luteus NCTC 2665] gi|281414664|ref|ZP_06246406.1| tRNA-adenosine deaminase [Micrococcus luteus NCTC 2665] gi|239838089|gb|ACS29886.1| tRNA-adenosine deaminase [Micrococcus luteus NCTC 2665] Length = 168 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 7/134 (5%) Query: 23 EIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI------LPEVD 75 ++P+GA V + +++ GN + D TAHAE+LA+R G + + L + Sbjct: 34 DVPIGAALVAGDGTVLAVVGNEREQHHDPTAHAEVLALRRGAELRAAAGAHDGWRLTDCT 93 Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 L VTLEPC MCA A+ LARI R+ +GA +PK G + +H ++ G+ + Sbjct: 94 LVVTLEPCPMCAGALLLARIPRVVFGAWDPKAGACGSVLDVVRDPRFNHRVQVRAGVRSE 153 Query: 136 RSRQIIQDFFKERR 149 S +++ FF +R Sbjct: 154 ESAALLRGFFAAQR 167 >gi|255580984|ref|XP_002531310.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Ricinus communis] gi|223529101|gb|EEF31082.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Ricinus communis] Length = 223 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 15/115 (13%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALE+A++A E+PVG V V + K+I+ NR E ++ T HAE+ AI + +L Sbjct: 46 YMELALEQARHALDSLEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAIDV---LL 102 Query: 67 SQ------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 Q E + LYVT EPC MCAAA+S+ I +YYG +N K GG Sbjct: 103 EQWQKGGLSVSEVAEKFSKCVLYVTCEPCIMCAAALSILGIEEVYYGCANDKFGG 157 >gi|254233244|ref|ZP_04926570.1| hypothetical protein TBCG_03677 [Mycobacterium tuberculosis C] gi|124603037|gb|EAY61312.1| hypothetical protein TBCG_03677 [Mycobacterium tuberculosis C] Length = 152 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 62/114 (54%), Gaps = 1/114 (0%) Query: 37 ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTLEPCTMCAAAISLARI 95 ++RA N L D TAHAEILA+R+ +L L L VT+EPCTMCA A+ +AR+ Sbjct: 37 LARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTVEPCTMCAGALVMARV 96 Query: 96 RRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 RL +GA PK G + + +H PE+ G+ + ++ FF +R Sbjct: 97 ARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAPLEAFFARQR 150 >gi|115456425|ref|NP_001051813.1| Os03g0833900 [Oryza sativa Japonica Group] gi|40714681|gb|AAR88587.1| putative deoxycytidine deaminase [Oryza sativa Japonica Group] gi|108711941|gb|ABF99736.1| Guanine deaminase, putative, expressed [Oryza sativa Japonica Group] gi|113550284|dbj|BAF13727.1| Os03g0833900 [Oryza sativa Japonica Group] gi|215707116|dbj|BAG93576.1| unnamed protein product [Oryza sativa Japonica Group] gi|218194042|gb|EEC76469.1| hypothetical protein OsI_14201 [Oryza sativa Indica Group] gi|222626116|gb|EEE60248.1| hypothetical protein OsJ_13255 [Oryza sativa Japonica Group] Length = 186 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+S A+EEA Q + P GAV V N++I+ N + D TAHAE+ AIR C+ Sbjct: 34 FLSKAVEEAYQGVDCGHGGPFGAVVVRNDEIVVSCHNMVLDYTDPTAHAEVTAIREACKK 93 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L + L + ++Y + EPC MC A+ L+RI+RL YGA Sbjct: 94 LGKIELSDCEMYASCEPCPMCFGAVHLSRIKRLVYGA 130 >gi|297833236|ref|XP_002884500.1| deoxycytidine deaminase [Arabidopsis lyrata subsp. lyrata] gi|297330340|gb|EFH60759.1| deoxycytidine deaminase [Arabidopsis lyrata subsp. lyrata] Length = 191 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 39/78 (50%), Positives = 51/78 (65%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V N+I+ N + KD TAHAEI+AIR C+ L++ L E +LY + EPC Sbjct: 62 PFGAVIVHKNEIVVSCHNMVLKYKDPTAHAEIIAIREACKKLNEIKLSECELYASCEPCP 121 Query: 85 MCAAAISLARIRRLYYGA 102 MC AI L+R++RL YGA Sbjct: 122 MCFGAIHLSRLKRLVYGA 139 >gi|15241124|ref|NP_198157.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis thaliana] gi|14532498|gb|AAK63977.1| AT5g28050/F15F15_120 [Arabidopsis thaliana] gi|22137296|gb|AAM91493.1| AT5g28050/F15F15_120 [Arabidopsis thaliana] gi|332006385|gb|AED93768.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis thaliana] Length = 185 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F++ A+EEA + + P GAV V NN++++ N + D TAHAE+ AIR C+ Sbjct: 33 FLTQAVEEAYKGVDCGDGGPFGAVIVHNNEVVASCHNMVLKYTDPTAHAEVTAIREACKK 92 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L++ L E ++Y + EPC MC AI L+R++RL YGA Sbjct: 93 LNKIELSECEIYASCEPCPMCFGAIHLSRLKRLVYGA 129 >gi|317485386|ref|ZP_07944265.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bilophila wadsworthia 3_1_6] gi|316923345|gb|EFV44552.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bilophila wadsworthia 3_1_6] Length = 189 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/144 (34%), Positives = 76/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ +A+ A + E+PVGA+ V I++ N+ L D +AHAEI+A+R + Sbjct: 46 LMLQAIAKARQAPQQGEVPVGALIVDPAGTILAAEHNQPITLSDPSAHAEIMAMRSAGAV 105 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L L VTLEPC MC AI AR+ + YGA++ K G +E+ L +H Sbjct: 106 LGNYRLEGCILVVTLEPCLMCTGAIVHARLAGVVYGAADNKAGAVESCFNGLDLPFHNHR 165 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 GI+ ++Q+FF++ R Sbjct: 166 VWHMGGIAAPECASLLQNFFQKSR 189 >gi|79328917|ref|NP_001031959.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis thaliana] gi|332006386|gb|AED93769.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis thaliana] Length = 204 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F++ A+EEA + + P GAV V NN++++ N + D TAHAE+ AIR C+ Sbjct: 52 FLTQAVEEAYKGVDCGDGGPFGAVIVHNNEVVASCHNMVLKYTDPTAHAEVTAIREACKK 111 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L++ L E ++Y + EPC MC AI L+R++RL YGA Sbjct: 112 LNKIELSECEIYASCEPCPMCFGAIHLSRLKRLVYGA 148 >gi|302535698|ref|ZP_07288040.1| cytidine/deoxycytidine deaminase [Streptomyces sp. C] gi|302444593|gb|EFL16409.1| cytidine/deoxycytidine deaminase [Streptomyces sp. C] Length = 163 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 1/140 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALEEA A ++PVGAV + +++S N D TAHAE+LA+R L Sbjct: 22 MRLALEEAALAVPAGDVPVGAVVLGPGGELLSTGHNEREAAGDPTAHAELLALRRAAARL 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPC MCA A+ +R+ R+ YGA + K G + +H P Sbjct: 82 GEWRLTGCTLVVTLEPCVMCAGALVQSRVARVVYGAGDEKAGAAGSLWDLVRDRRLNHRP 141 Query: 127 EIYPGISEQRSRQIIQDFFK 146 E+ G+ EQ + + DFF+ Sbjct: 142 EVIRGVLEQECARQLTDFFR 161 >gi|170585310|ref|XP_001897427.1| tRNA-specific adenosine deaminase 2 [Brugia malayi] gi|158595106|gb|EDP33679.1| tRNA-specific adenosine deaminase 2, putative [Brugia malayi] Length = 192 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 47/149 (31%), Positives = 87/149 (58%), Gaps = 9/149 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F++ A E A +A NE+PVG V V + ++ N K+ T HAE++A+ M + Sbjct: 14 FLNRAFEIAVDAVANNEVPVGCVFVFEGQEVAFGRNDVNRSKNPTYHAEMVALEMMKQWC 73 Query: 67 S------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN-GTQFYTL 119 + ++++ LYVTLEPC MCA+A+ ++++ YGA+N + GG+ + GT+ Sbjct: 74 TDNGRELEDVMRCTTLYVTLEPCIMCASALYHLHLKKILYGAANERFGGLLSVGTREKYG 133 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148 A H EI P ++ R+ +++++F++++ Sbjct: 134 AK--HFIEIMPNLNVSRAVKLLKEFYEKQ 160 >gi|228994217|ref|ZP_04154115.1| Cytosine deaminase [Bacillus pseudomycoides DSM 12442] gi|228765510|gb|EEM14166.1| Cytosine deaminase [Bacillus pseudomycoides DSM 12442] Length = 169 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/107 (42%), Positives = 62/107 (57%), Gaps = 3/107 (2%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +F+ ALEEA+ A N PVGA+ V NN+I+ + NR D +AHAEI AIR + Sbjct: 7 LFLEMALEEAKKAMKENTYPVGAIIVGRNNEILGKGRNRVHTQDDASAHAEIDAIRTAGK 66 Query: 65 --ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 IL++E + LY TLEPC MC AI + R+ + ++ KG G Sbjct: 67 KLILAKENRLPITLYTTLEPCPMCTGAILFSHFTRVVWILNDDKGFG 113 >gi|311085993|gb|ADP66075.1| hypothetical protein CWO_01335 [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] Length = 130 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/101 (41%), Positives = 58/101 (57%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K +M AL+ A A + EIP+GA+ V +II N + D TAHAEI+A+R Sbjct: 5 KDKNWMKIALKYAYYAKEKGEIPIGAILVFKERIIGIGWNSSISKNDPTAHAEIIALRGA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + + L LYVTL+PC MC AI +RI+RL +GA+ Sbjct: 65 GKKIKNYRLLNTTLYVTLQPCIMCCGAIIQSRIKRLVFGAN 105 >gi|169642534|gb|AAI60619.1| Adat2 protein [Danio rerio] Length = 238 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 28/159 (17%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63 +M+ A + A A E+PVG + V NN+II + N E K+ T HAE++A+ C Sbjct: 24 WMAKAFDMAVEAFENGEVPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLDWC 83 Query: 64 RIL---SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI---------- 110 R+ +E+ + LYVT+EPC MCAAA+ L RI + YG N + GG Sbjct: 84 RLREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGGCGSVLDVSSDH 143 Query: 111 --ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 GT F +A G + + ++++ F+K+ Sbjct: 144 LPHTGTSFKCIA----------GYRAEEAVEMLKTFYKQ 172 >gi|156186020|gb|ABU55328.1| cytidine and deoxycytidylate deaminase family protein [Callosobruchus chinensis] Length = 71 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%) Query: 34 NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93 + ++S A N + D TAHAE+LAI+ C +LS L + D+YVTLEPC MCA AIS A Sbjct: 3 SNVVSSAHNISN---DPTAHAEMLAIKQECELLSTSTLYDSDIYVTLEPCPMCAQAISFA 59 Query: 94 RIRRLYYGASNP 105 I+R Y+GA NP Sbjct: 60 XIKRXYFGAYNP 71 >gi|239907227|ref|YP_002953968.1| putative deaminase [Desulfovibrio magneticus RS-1] gi|239797093|dbj|BAH76082.1| putative deaminase [Desulfovibrio magneticus RS-1] Length = 162 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 70/129 (54%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E PVGAV + ++++RAGN D TAHAE+ +R + LP L VTL Sbjct: 29 GETPVGAVLLSAAGELLARAGNAPITTNDPTAHAEMRVLRQAAAKVGNYRLPGTILAVTL 88 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MC A+ AR+ L YGA++P+ G +++ L +H + GI + I Sbjct: 89 EPCLMCLGAMIHARVGLLVYGATDPRCGVVDSRLPGPDLPFFNHRFNVVSGIRAEECGGI 148 Query: 141 IQDFFKERR 149 +++FF+E+R Sbjct: 149 LRNFFREKR 157 >gi|217071302|gb|ACJ84011.1| unknown [Medicago truncatula] Length = 181 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A+EEA + + P GAV VLN+++I+ N D +AHAE+ AIR C+ Sbjct: 29 FLRKAVEEAYKGVECEDGGPFGAVIVLNDEVIASCHNMVLRNTDPSAHAEVTAIREACKK 88 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L Q L E ++Y + EPC MC AI L+R++RL YGA Sbjct: 89 LKQIELSECEIYASCEPCPMCFGAIHLSRVKRLVYGA 125 >gi|213965664|ref|ZP_03393857.1| tRNA-specific adenosine deaminase [Corynebacterium amycolatum SK46] gi|213951615|gb|EEB63004.1| tRNA-specific adenosine deaminase [Corynebacterium amycolatum SK46] Length = 147 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+ EA + A ++PVGAV V K++ R NR D AHAE++A+R R + Sbjct: 1 MRLAIAEAAHTA-PGDVPVGAVVVDAEGKVVGRGSNRREADGDPLAHAEVIALREATRAV 59 Query: 67 SQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L VTLEPC MCA A + R+ R+ +GA +PK G + + Sbjct: 60 GDGWRLEQCTLVVTLEPCVMCAGACVMGRVGRVVFGAWSPKTGACGSIADVIRDPAHAFT 119 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P++ G+ +++FF+ +R Sbjct: 120 PQVRGGVLADECSVYLREFFERQR 143 >gi|74317234|ref|YP_314974.1| tRNA-adenosine deaminase [Thiobacillus denitrificans ATCC 25259] gi|74056729|gb|AAZ97169.1| probable cytosine/adenosine deaminases [Thiobacillus denitrificans ATCC 25259] Length = 151 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 62/126 (49%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGA+ V +I+ R NR D TAHAE++A+R L L LYVT+EPC Sbjct: 17 VPVGALVVCGGEIVGRGYNRPISSFDPTAHAEVMALRDAAARLGNYRLVGCTLYVTMEPC 76 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARI R+ YGA K G + + + E+ G+ I Sbjct: 77 VMCAGAILHARIARVVYGAREYKTGAHGSIVDVFAEPRLNFHCEVEGGVLADECAATISG 136 Query: 144 FFKERR 149 FF+ RR Sbjct: 137 FFEARR 142 >gi|302794668|ref|XP_002979098.1| hypothetical protein SELMODRAFT_109716 [Selaginella moellendorffii] gi|300153416|gb|EFJ20055.1| hypothetical protein SELMODRAFT_109716 [Selaginella moellendorffii] Length = 162 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 16/149 (10%) Query: 14 EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GCRILSQEI 70 +A+ A R E+PVG V V N ++I+ NR E ++ T HAE+ AI M S E Sbjct: 1 QARQALNRLEVPVGCVIVENGRVIASGSNRTNETRNATRHAEMEAIDMLLPRWECSSHED 60 Query: 71 LPE----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + +LYVT EPC MCAAA+SL I +++YG N + GG + ++ HSP Sbjct: 61 FSKRFAGCELYVTCEPCIMCAAALSLLGIGKVFYGCKNDRFGGCGSILSLHSNGV-GHSP 119 Query: 127 E-----IYP---GISEQRSRQIIQDFFKE 147 E YP GI + + + ++F+++ Sbjct: 120 ESAGGMTYPCVGGIMAEEAIGLFREFYEQ 148 >gi|134024903|gb|AAI35110.1| Unknown (protein for IMAGE:7163502) [Danio rerio] Length = 241 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 6/109 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63 +M+ A + A A E+PVG + V NN+II + N E K+ T HAE++A+ C Sbjct: 51 WMAKAFDMAVEALENGEVPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLDWC 110 Query: 64 RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 R+ + E+ + LYVT+EPC MCAAA+ L RI + YG N + GG Sbjct: 111 RLREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGG 159 >gi|229070516|ref|ZP_04203757.1| Cytosine deaminase [Bacillus cereus F65185] gi|228712598|gb|EEL64532.1| Cytosine deaminase [Bacillus cereus F65185] Length = 169 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 48/106 (45%), Positives = 62/106 (58%), Gaps = 3/106 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR-MGCR 64 F+ ALEEA+ A N PVGAV V NN +I+R NR KD+TAHAEI AIR G Sbjct: 9 FLEMALEEAEKALKENTYPVGAVIVDGNNNVIARGRNRVHPQKDITAHAEIDAIRNAGEA 68 Query: 65 ILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 + +I E +Y TLEPC MC I A+I+R+ + ++ G G Sbjct: 69 MFDAKIKNEKFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFG 114 >gi|302329844|gb|ADL20038.1| Cytosine/adenosine deaminase [Corynebacterium pseudotuberculosis 1002] Length = 151 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/145 (35%), Positives = 72/145 (49%), Gaps = 3/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ +AQ A +IPVGAV + +++ R NR +D HAEI+AIR Sbjct: 8 LMRQAIIQAQ-ATPPGDIPVGAVIFGPDGEVLGRGVNRREADRDPLGHAEIMAIREAVAN 66 Query: 66 LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + L VTLEPCTMCA A+ ARI R+++GA PK G + H Sbjct: 67 HDDGWRLTDCTLAVTLEPCTMCAGALVGARIGRIFFGAYEPKTGACGSAFDVVRDPAVLH 126 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 PE+ GI + ++ FF+ R Sbjct: 127 VPEVRGGILQDECAALVTHFFEGLR 151 >gi|302205290|gb|ADL09632.1| Cytosine/adenosine deaminase [Corynebacterium pseudotuberculosis C231] Length = 182 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/145 (35%), Positives = 72/145 (49%), Gaps = 3/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ +AQ A +IPVGAV + +++ R NR +D HAEI+AIR Sbjct: 39 LMRQAIIQAQ-ATPPGDIPVGAVIFGPDGEVLGRGVNRREADRDPLGHAEIMAIREAVAN 97 Query: 66 LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + L VTLEPCTMCA A+ ARI R+++GA PK G + H Sbjct: 98 HDDGWRLTDCTLAVTLEPCTMCAGALVGARIGRIFFGAYEPKTGACGSAFDVVRDPAVLH 157 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 PE+ GI + ++ FF+ R Sbjct: 158 VPEVRGGILQDECAALVTHFFEGLR 182 >gi|303242511|ref|ZP_07328990.1| CMP/dCMP deaminase zinc-binding [Acetivibrio cellulolyticus CD2] gi|302589929|gb|EFL59698.1| CMP/dCMP deaminase zinc-binding [Acetivibrio cellulolyticus CD2] Length = 157 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 2/150 (1%) Query: 1 MKKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M+K + FM A +EA + + P GAV V +N II+RA N + D T HAE++AI Sbjct: 1 MRKNSDFMKVAAQEAVEGVKSGHGGPFGAVIVKDNMIIARAHNEVIKNNDPTDHAEMIAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R ++L + L + +LY + EPC MC +AI A+I +++YG + I + Y Sbjct: 61 RSAAKMLERFDLSDCELYTSCEPCPMCFSAIHWAKIEKVFYGCTREDAASIGFDDK-YIY 119 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 E EQ+ R++ + F E + Sbjct: 120 DVIKGKAERKKVEFEQKDRELCLEAFDEWK 149 >gi|78212739|ref|YP_381518.1| tRNA-adenosine deaminase [Synechococcus sp. CC9605] gi|78197198|gb|ABB34963.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. CC9605] Length = 174 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 3/138 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M L+ A+ L E+PV AV +L+ + I NR +D HAE++A++ Sbjct: 27 WMDVLLQRAEGVGLEGEVPVAAV-ILDGQGRAIGHGRNRRENNRDPLGHAELVALQQAAI 85 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + L VTLEPC MCA A+ AR+ + + AS+PK GG+ T A+ HH Sbjct: 86 VQNDWRFNNCTLIVTLEPCPMCAGALVQARMGTVVFAASDPKRGGLGGSLDLSTHASAHH 145 Query: 125 SPEIYPGISEQRSRQIIQ 142 ++ + E +R+ ++ Sbjct: 146 HMKVIQSVREPEAREQLE 163 >gi|313157371|gb|EFR56794.1| cytidine and deoxycytidylate deaminase zinc-binding region [Alistipes sp. HGB5] Length = 149 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 5/144 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM AL EA+ A E+P+GAV V + ++ R N L D TAHAE+ A+ Sbjct: 6 KTDEKFMRLALNEARKALQLQEVPIGAVVVADGAVVGRGHNLVETLSDPTAHAEMQALTA 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L LYVT+EPC MCA A A++ R+ +GA +PK G + Y+ Sbjct: 66 AASTLGGKYLQGCTLYVTVEPCIMCAGATGWAQVGRVVWGADDPK-----KGYRRYSETV 120 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 H + G+ + +++ FF Sbjct: 121 FHPKTTVVRGVLGEECEELMTSFF 144 >gi|157413307|ref|YP_001484173.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9215] gi|157387882|gb|ABV50587.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9215] Length = 171 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 8/141 (5%) Query: 17 NAALRNEIPVGAVA------VLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 N+ LR I +G V +L+ + I R NR KD HAEI+A+R I + Sbjct: 28 NSLLRRSIEIGKVELPICSIILDERGRCIGRGVNRRNINKDPLGHAEIMALRQASLIKND 87 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 E + LEPCTMC++A+ AR+ ++ +GA + K GG+ + HH EI Sbjct: 88 WRFNECTIITNLEPCTMCSSALIQARMGKVIFGAYDKKRGGLGGSIDLSKHESAHHKMEI 147 Query: 129 YPGISEQRSRQIIQDFFKERR 149 G+ E +I+Q +FK+ R Sbjct: 148 IGGLLEDECSKILQIWFKKLR 168 >gi|302559794|ref|ZP_07312136.1| cytidine and deoxycytidylate deaminase [Streptomyces griseoflavus Tu4000] gi|302477412|gb|EFL40505.1| cytidine and deoxycytidylate deaminase [Streptomyces griseoflavus Tu4000] Length = 107 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/100 (39%), Positives = 56/100 (56%) Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 D TAHAE+LA+R L + L L VTLEPCTMCA AI +R+ R+ YGA + K G Sbjct: 8 DPTAHAEVLALRRAAAELGEWRLAGCTLVVTLEPCTMCAGAIQQSRVDRVVYGARDEKAG 67 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + +H PE+ G+ + +++ +FF+ER Sbjct: 68 AAGSLWDLVRDRRLNHRPEVIEGVLSEECARLLTEFFRER 107 >gi|299747155|ref|XP_002911134.1| tRNA specific adenosine deaminase [Coprinopsis cinerea okayama7#130] gi|298407392|gb|EFI27640.1| tRNA specific adenosine deaminase [Coprinopsis cinerea okayama7#130] Length = 188 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 11/112 (9%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A+ A E+PVG V V + KII++A NR EL++ T HAE+ AI C + Sbjct: 14 WMKEAMNMAEEALAAGEVPVGCVFVRDEKIIAKARNRTNELRNATRHAELEAI--DCILS 71 Query: 67 SQEILPE---------VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 E+ P+ LYVT+EPC MCA+A+ I+ ++YG N + GG Sbjct: 72 DNELTPQKGEPYPLSTTTLYVTVEPCIMCASALRQLGIKEVFYGCGNERFGG 123 >gi|131888897|ref|NP_001076566.1| tRNA-specific adenosine deaminase 2 [Danio rerio] gi|55962646|emb|CAI11650.1| novel protein [Danio rerio] gi|190337669|gb|AAI63783.1| Adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae) [Danio rerio] gi|190340014|gb|AAI63804.1| Adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae) [Danio rerio] Length = 206 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 28/161 (17%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---G 62 +M+ A + A A E+PVG + V NN+II + N E K+ T HAE++A+ Sbjct: 23 TWMAKAFDMAVEALENGEVPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLDW 82 Query: 63 CRILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI--------- 110 CR+ + E+ + LYVT+EPC MCAAA+ L RI + YG N + GG Sbjct: 83 CRLREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGGCGSVLDVSSD 142 Query: 111 ---ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 GT F +A G + + ++++ F+K+ Sbjct: 143 HLPHTGTSFKCIA----------GYRAEEAVEMLKTFYKQE 173 >gi|308176278|ref|YP_003915684.1| cytosine deaminase [Arthrobacter arilaitensis Re117] gi|307743741|emb|CBT74713.1| putative cytosine deaminase [Arthrobacter arilaitensis Re117] Length = 158 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 7/135 (5%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRILSQE------ILPEV 74 +++P+GAV + + G RE D TAHAE++AIR + L + L + Sbjct: 23 DDVPIGAVILSPAGEVLATGRNEREAGNDPTAHAEVVAIRNAVKALEAKGEDDGWRLSDC 82 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134 L VTLEPC MCA AI L+RI +L +GA + K G + +H E+Y + E Sbjct: 83 TLVVTLEPCAMCAGAIVLSRIPKLVFGAWDEKAGACGSVFDIVREPRLNHWVEVYSRVKE 142 Query: 135 QRSRQIIQDFFKERR 149 + +++++FF+ +R Sbjct: 143 EECAELLREFFRGKR 157 >gi|255324366|ref|ZP_05365485.1| tRNA-specific adenosine deaminase [Corynebacterium tuberculostearicum SK141] gi|255298585|gb|EET77883.1| tRNA-specific adenosine deaminase [Corynebacterium tuberculostearicum SK141] Length = 143 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 2/130 (1%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79 ++PVGAV ++ NR EL D TAHAE+ AIR R+ L +L VT Sbjct: 14 GDVPVGAVLYDAAGTELATGVNRREELADPTAHAEVEAIRQAVRVHGDGWRLSGCELVVT 73 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA A+ AR+ + +GA PK G + T +P++ G+ E+ Sbjct: 74 LEPCAMCAGALQAARVGSVVFGAFEPKTGACGSLIDVLRAPTAPFTPQVRGGVLEEECAA 133 Query: 140 IIQDFFKERR 149 ++++FF + R Sbjct: 134 LLRNFFDDLR 143 >gi|300780042|ref|ZP_07089898.1| cytidine and deoxycytidylate deaminase [Corynebacterium genitalium ATCC 33030] gi|300534152|gb|EFK55211.1| cytidine and deoxycytidylate deaminase [Corynebacterium genitalium ATCC 33030] Length = 151 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 2/139 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+E A+ + +IPVGAV + + I+ NR +D HAE++ R + L Sbjct: 1 MRRAIEVARTTPI-GDIPVGAVLYGPDGEEIATGTNRRETDRDPVGHAEVVVTRKAAQAL 59 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +L VTLEPCTMCA AI AR++ L +GA PK G + + H+ Sbjct: 60 GTWRLDGCELVVTLEPCTMCAGAILGARVQSLVFGAYEPKTGAVGSLIDVLRDPPHLHTV 119 Query: 127 EIYPGISEQRSRQIIQDFF 145 E+ G+ E + +++DFF Sbjct: 120 EVRGGVLETETASLMRDFF 138 >gi|41406377|ref|NP_959213.1| hypothetical protein MAP0279 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394725|gb|AAS02596.1| hypothetical protein MAP_0279 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 152 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 76/145 (52%), Gaps = 3/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + AL A A R+ +P+GAV V + ++RA N L D TAHAEILA+R Sbjct: 7 LIRSALAVAATAGPRD-VPIGAVVVGADGTELARAVNAREALGDPTAHAEILALRAAAAA 65 Query: 66 LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L L VT+EPCTMCA A+ LARI RL +GA PK G + + +H Sbjct: 66 LGDGWRLEGATLAVTVEPCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVRDRRLNH 125 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 PE+ G+ E+ ++ FF +R Sbjct: 126 RPEVRGGVLERECAAPLEGFFARQR 150 >gi|269793794|ref|YP_003313249.1| tRNA-adenosine deaminase [Sanguibacter keddieii DSM 10542] gi|269095979|gb|ACZ20415.1| tRNA-adenosine deaminase [Sanguibacter keddieii DSM 10542] Length = 147 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 42/117 (35%), Positives = 56/117 (47%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 + +I R N D TAHAE+LA+R + L + L L VTLEPC MCA A L Sbjct: 27 DGTVIGRGHNAREAAGDPTAHAEVLALREAAQTLGEWRLTGCTLVVTLEPCVMCAGATML 86 Query: 93 ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 AR+ RL GA + K G + H E+ G+ E ++ DFF + R Sbjct: 87 ARVPRLVLGAWDDKAGATGSMWDLVRDRRSTHRVEVVGGVREAECAALLLDFFADHR 143 >gi|161784292|sp|Q5RIV4|ADAT2_DANRE RecName: Full=tRNA-specific adenosine deaminase 2; AltName: Full=Deaminase domain-containing protein 1; AltName: Full=tRNA-specific adenosine-34 deaminase subunit ADAT2 Length = 214 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 6/109 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63 +M+ A + A A E+PVG + V NN+II + N E K+ T HAE++A+ C Sbjct: 24 WMAKAFDMAVEALENGEVPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLDWC 83 Query: 64 RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 R+ + E+ + LYVT+EPC MCAAA+ L RI + YG N + GG Sbjct: 84 RLREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGG 132 >gi|18266045|gb|AAL67435.1|AF458409_1 deoxycytidine deaminase [Brassica oleracea] Length = 185 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 41/97 (42%), Positives = 60/97 (61%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F++ A+EEA + + P GAV V N++++ N + D TAHAE+ AIR C+ Sbjct: 33 FLTQAVEEAYKGVDCGDGGPFGAVIVHKNEVVASCHNMVLKYTDPTAHAEVTAIREACKK 92 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L+Q L E ++Y + EPC MC AI L+R++RL YGA Sbjct: 93 LNQIELSECEIYASCEPCPMCFGAIHLSRLKRLVYGA 129 >gi|126641614|ref|YP_001084598.1| putative deaminase [Acinetobacter baumannii ATCC 17978] Length = 135 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 45/113 (39%), Positives = 57/113 (50%), Gaps = 1/113 (0%) Query: 34 NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE-VDLYVTLEPCTMCAAAISL 92 NK+I N L D TAHAEI AIR C L LPE LYVTLEPCTMC A+ Sbjct: 4 NKLIGAGFNAPIGLSDPTAHAEIQAIRAACESLKNYRLPEDATLYVTLEPCTMCVGALVH 63 Query: 93 ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 ARI+ + +G + PK G + + Q +H G ++ Q + FF Sbjct: 64 ARIKHVVFGTTEPKAGSLVSARQLLENGYYNHKFTFEHGCLHEKCAQQLSLFF 116 >gi|315605309|ref|ZP_07880353.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) [Actinomyces sp. oral taxon 180 str. F0310] gi|315312989|gb|EFU61062.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) [Actinomyces sp. oral taxon 180 str. F0310] Length = 451 Score = 77.8 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 70/143 (48%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A ++PVGAV V +II R N D T HAE++A+R L Sbjct: 1 MGKALFLANRARETGDVPVGAVVVDAGGRIIGRGWNCREGHHDPTGHAEVVALREAGCAL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA AI +R+ R+ +GA +PK G + A H Sbjct: 61 GTWRLTGCTLVVTLEPCTMCAGAILASRVDRVVFGAWDPKAGAAGSLRDVLRDARMPHPT 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ Q + ++ FF RR Sbjct: 121 EVIGGVLAQEAAMQLRSFFIGRR 143 >gi|300857552|ref|YP_003782535.1| hypothetical protein cpfrc_00135 [Corynebacterium pseudotuberculosis FRC41] gi|300685006|gb|ADK27928.1| hypothetical protein cpfrc_00135 [Corynebacterium pseudotuberculosis FRC41] gi|308275531|gb|ADO25430.1| Cytosine/adenosine deaminase [Corynebacterium pseudotuberculosis I19] Length = 167 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/145 (35%), Positives = 72/145 (49%), Gaps = 3/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ +AQ A +IPVGAV + +++ R NR +D HAEI+AIR Sbjct: 24 LMRQAIIQAQ-ATPPGDIPVGAVIFGPDGEVLGRGVNRREADRDPLGHAEIMAIREAVAN 82 Query: 66 LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + L VTLEPCTMCA A+ ARI R+++GA PK G + H Sbjct: 83 HDDGWRLTDCTLAVTLEPCTMCAGALVGARIGRIFFGAYEPKTGACGSAFDVVRDPAVLH 142 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 PE+ GI + ++ FF+ R Sbjct: 143 VPEVRGGILQDECAALVTHFFEGLR 167 >gi|304405271|ref|ZP_07386931.1| CMP/dCMP deaminase zinc-binding [Paenibacillus curdlanolyticus YK9] gi|304346150|gb|EFM11984.1| CMP/dCMP deaminase zinc-binding [Paenibacillus curdlanolyticus YK9] Length = 172 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 42/94 (44%), Positives = 53/94 (56%), Gaps = 4/94 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 + CA+E Q R E P GA V N+++I+ A NR KD T HAE++AIR C L Sbjct: 17 VDCAMEGTQ----RMEFPFGACLVHNDRVIAIASNRCLSSKDPTMHAEMIAIREACGTLD 72 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + L + LY T EPC MC AI A I R+ YG Sbjct: 73 RASLQQATLYATTEPCVMCMGAIHWAGIPRIVYG 106 >gi|293194557|ref|ZP_06610019.1| tRNA-specific adenosine deaminase [Actinomyces odontolyticus F0309] gi|292819677|gb|EFF78695.1| tRNA-specific adenosine deaminase [Actinomyces odontolyticus F0309] Length = 332 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/139 (38%), Positives = 68/139 (48%), Gaps = 1/139 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A ++PVGAV V N +II R N D HAEI+A+R R Sbjct: 1 MGKALFLANRARETGDVPVGAVIVDENGRIIGRGWNCREANHDPAGHAEIVALREAGRAR 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA AI +RI R+ +GA +PK G + A H Sbjct: 61 GTWRLTGCTLIVTLEPCTMCAGAILASRIDRVVFGAWDPKAGAAGSLRDVLRDARMPHPT 120 Query: 127 EIYPGISEQRSRQIIQDFF 145 E+ G+ Q + ++ FF Sbjct: 121 EVIGGVLAQEAAMQLRSFF 139 >gi|167581517|ref|ZP_02374391.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia thailandensis TXDOH] Length = 194 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 68/126 (53%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I+R N D +AHAE+ A+R R L +P +LYVTLEPC Sbjct: 49 VPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLEPC 108 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MC+ AI ARI R+ +GA +PK G + + +H + G+ ++ Sbjct: 109 LMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADVRLNHHTTVEGGVLADECGAALKS 168 Query: 144 FFKERR 149 FF ERR Sbjct: 169 FFAERR 174 >gi|223997732|ref|XP_002288539.1| hypothetical protein THAPSDRAFT_268551 [Thalassiosira pseudonana CCMP1335] gi|220975647|gb|EED93975.1| hypothetical protein THAPSDRAFT_268551 [Thalassiosira pseudonana CCMP1335] Length = 180 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/154 (34%), Positives = 79/154 (51%), Gaps = 15/154 (9%) Query: 7 FMSCALEEAQNAALRNEIPVGAVA---VLNNKIISRAGNRNRELKDVTAHAEILAI-RMG 62 FM AL A+ A E+PVG + ++ I+S N+ +D T HAEI+AI RM Sbjct: 5 FMRQALCVARTALDIGEVPVGCIVPYMASHSVIVSHGANQVNATRDATRHAEIVAIDRML 64 Query: 63 CR-------ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + L EI DLYVT EPC MCAAA+S+ I R+++G N + GG + Sbjct: 65 TKGRSSDQLKLPPEIFANCDLYVTCEPCIMCAAALSVMGIGRVFFGCRNDRFGGCGSILH 124 Query: 116 FYTLATC----HHSPEIYPGISEQRSRQIIQDFF 145 + T HH I+ G+ E+ + +++ F+ Sbjct: 125 LHKEDTLQSSKHHGFTIHGGLLEEEAVALLRSFY 158 >gi|217071124|gb|ACJ83922.1| unknown [Medicago truncatula] Length = 186 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 48/125 (38%), Positives = 65/125 (52%), Gaps = 10/125 (8%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A+EEA + + P GAV V N+++++ N D TAHAE+ AIR C+ Sbjct: 34 FLRRAVEEAYKGVDCGDGGPFGAVIVHNDEVVASCHNMVLNFTDPTAHAEVTAIREACKK 93 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE---------NGTQF 116 L Q L + ++Y + EPC MC AI L+RI+RL YGA I GT F Sbjct: 94 LKQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGF 153 Query: 117 YTLAT 121 Y AT Sbjct: 154 YQKAT 158 >gi|291303426|ref|YP_003514704.1| CMP/dCMP deaminase zinc-binding protein [Stackebrandtia nassauensis DSM 44728] gi|290572646|gb|ADD45611.1| CMP/dCMP deaminase zinc-binding protein [Stackebrandtia nassauensis DSM 44728] Length = 144 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Query: 22 NEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79 +++P+GAV + I ++ A N D TAHAE++A+R + L + L VT Sbjct: 13 SDVPIGAVVYSPDGIELAAAHNLREATGDPTAHAELVALRRAAEVHGDGWRLSDCVLVVT 72 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 +EPCTMCA AI+L+RI + +GA PK G + + H P++Y G+ E Sbjct: 73 VEPCTMCAGAITLSRIGTVVFGAWEPKTGAVGSLWDVVRDRRLAHRPQVYSGVLEAECAA 132 Query: 140 IIQDFFK 146 +++ FF Sbjct: 133 LLRGFFS 139 >gi|198443277|pdb|3DH1|A Chain A, Crystal Structure Of Human Trna-Specific Adenosine-34 Deaminase Subunit Adat2 gi|198443278|pdb|3DH1|B Chain B, Crystal Structure Of Human Trna-Specific Adenosine-34 Deaminase Subunit Adat2 gi|198443279|pdb|3DH1|C Chain C, Crystal Structure Of Human Trna-Specific Adenosine-34 Deaminase Subunit Adat2 gi|198443280|pdb|3DH1|D Chain D, Crystal Structure Of Human Trna-Specific Adenosine-34 Deaminase Subunit Adat2 Length = 189 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 8/155 (5%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 23 MEETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAID 82 Query: 61 M---GCRILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR + E+ LYVT+EPC MCAAA+ L +I + YG N + GG + Sbjct: 83 QVLDWCRQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVL 142 Query: 115 QFYT--LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + L + PG + + ++++ F+K+ Sbjct: 143 NIASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 177 >gi|91772283|ref|YP_564975.1| CMP/dCMP deaminase, zinc-binding [Methanococcoides burtonii DSM 6242] gi|91711298|gb|ABE51225.1| Guanine deaminase [Methanococcoides burtonii DSM 6242] Length = 159 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 3/116 (2%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A++EAQ NE P GAV V ++ IIS+ N D +AHAEI+AIR Sbjct: 9 FMDAAVKEAQKGMRNNEGGPFGAVIVKDDTIISKGHNEVLGTNDPSAHAEIVAIRKASAA 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTL 119 L L +LY T PC MC +AI ARI ++YYG S G ++G + L Sbjct: 69 LEDFDLSGCELYATTMPCPMCLSAIMWARIGKIYYGTSTEDVASLGFDDGDIYAML 124 >gi|113969580|ref|YP_733373.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. MR-4] gi|113884264|gb|ABI38316.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. MR-4] Length = 252 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 62/127 (48%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V + I+ N + D AHAEI +R + + L + LYVTLEP Sbjct: 108 EVPVGAVLVKEGQQIATGYNLSISEHDPCAHAEIQCLRAAGQTIENYRLLDTTLYVTLEP 167 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCA A+ +RI R+ +GA + K G +H EI G+ Q + Sbjct: 168 CAMCAGAMVHSRIARVVFGAKDEKTGAAGTVLNLLQHPAFNHQVEITSGVLAQDCADQLS 227 Query: 143 DFFKERR 149 FFK RR Sbjct: 228 RFFKRRR 234 >gi|289669069|ref|ZP_06490144.1| hypothetical protein XcampmN_11383 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 174 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 6/147 (4%) Query: 7 FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL A+ A +EIPVGA+ V ++ N N D +AHAEI+A+R R Sbjct: 23 WMQHALHLAERAERDYDEIPVGALVVDAEGNVLGEGWNFNIASHDPSAHAEIVAMREAGR 82 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L+ L LYVTLEPC MCA A+ ARI R+ + AS+PK G G+ F LA H Sbjct: 83 RLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 140 Query: 125 SPE--IYPGISEQRSRQIIQDFFKERR 149 + + G+ + + ++F+ +R Sbjct: 141 NHHVRVSGGVLAAEASLRLTNYFRAKR 167 >gi|33861475|ref|NP_893036.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33634052|emb|CAE19377.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 165 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 1/128 (0%) Query: 23 EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+P+ AV + N + I R N+ D HAE++A+R I + E + V LE Sbjct: 35 ELPITAVIIDENGRCIGRGSNKREINNDPLGHAELIALRQASWIKNDWRFNECSIIVNLE 94 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PCTMCAAA+ AR+ ++ YG + K GG + HH ++ G+ Q + I Sbjct: 95 PCTMCAAALVQARMGQVIYGTKDDKRGGFGGTIDLSKHESAHHKMKVVGGVLNQDCKNNI 154 Query: 142 QDFFKERR 149 + +FK+ R Sbjct: 155 KLWFKKMR 162 >gi|289665842|ref|ZP_06487423.1| hypothetical protein XcampvN_22891 [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 174 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 6/147 (4%) Query: 7 FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL A+ A +EIPVGA+ V ++ N N D +AHAEI+A+R R Sbjct: 23 WMQHALHLAERAERDYDEIPVGALVVDAEGNVLGEGWNFNIASHDPSAHAEIVAMREAGR 82 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L+ L LYVTLEPC MCA A+ ARI R+ + AS+PK G G+ F LA H Sbjct: 83 RLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 140 Query: 125 SPE--IYPGISEQRSRQIIQDFFKERR 149 + + G+ + + ++F+ +R Sbjct: 141 NHHVRVSGGVLAAEASLRLTNYFRAKR 167 >gi|327356422|gb|EGE85279.1| tRNA specific adenosine deaminase [Ajellomyces dermatitidis ATCC 18188] Length = 174 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 44/118 (37%), Positives = 61/118 (51%), Gaps = 6/118 (5%) Query: 13 EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72 E+ + A E PVG V V N+++I N + + T HAE LAI R + I Sbjct: 3 EKGEEALASGETPVGCVLVHNDEVIGSGMNDTNKSMNGTRHAEFLAIEEVLRSHPRSIFR 62 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130 E DLYVT+EPC MCA+A+ +IR +Y+G +N + GG + H P I P Sbjct: 63 ETDLYVTVEPCIMCASALRQYQIRHVYFGCANERFGGTGG------VLKLHSDPGIDP 114 >gi|206968817|ref|ZP_03229772.1| cytosine deaminase [Bacillus cereus AH1134] gi|206735858|gb|EDZ53016.1| cytosine deaminase [Bacillus cereus AH1134] Length = 169 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 48/106 (45%), Positives = 62/106 (58%), Gaps = 3/106 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR-MGCR 64 F+ ALEEA+ A N PVGAV V NN +I+R NR KD+TAHAEI AIR G Sbjct: 9 FLQMALEEAEMALKENTYPVGAVIVDGNNNVIARGRNRVHPQKDITAHAEIDAIRNAGEA 68 Query: 65 ILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 + +I E +Y TLEPC MC I A+I+R+ + ++ G G Sbjct: 69 MFDAKIKNEKFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFG 114 >gi|52140651|ref|YP_086177.1| cytidine/deoxycytidylate deaminase family protein; guanine deaminase [Bacillus cereus E33L] gi|51974120|gb|AAU15670.1| cytidine/deoxycytidylate deaminase family protein; probable guanine deaminase [Bacillus cereus E33L] Length = 153 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 3/112 (2%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ A N +NE P GAV V + +I+++ N D TAHAE+L IR CR Sbjct: 6 FMKLAIDLAYNNT-KNEKGKPFGAVLVKDGEIVAKGVNEVLTTHDPTAHAELLTIREACR 64 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 ILS L + LY + EPC MC +AI A ++ +YY ++ + I GT++ Sbjct: 65 ILSTSDLSDCILYASGEPCPMCLSAIYWANLKHVYYSYTSQEEEEIGLGTKY 116 >gi|261188113|ref|XP_002620473.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2 [Ajellomyces dermatitidis SLH14081] gi|239593348|gb|EEQ75929.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2 [Ajellomyces dermatitidis SLH14081] gi|239609090|gb|EEQ86077.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2 [Ajellomyces dermatitidis ER-3] Length = 187 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 63/119 (52%) Query: 13 EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72 E+ + A E PVG V V N+++I N + + T HAE LAI R + I Sbjct: 3 EKGEEALASGETPVGCVLVHNDEVIGSGMNDTNKSMNGTRHAEFLAIEEVLRSHPRSIFR 62 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 E DLYVT+EPC MCA+A+ +IR +Y+G +N + GG + ++ + P I G Sbjct: 63 ETDLYVTVEPCIMCASALRQYQIRHVYFGCANERFGGTGGVLKLHSEKSLLKLPGIISG 121 >gi|254499275|ref|ZP_05111951.1| deaminase [Legionella drancourtii LLAP12] gi|254351519|gb|EET10378.1| deaminase [Legionella drancourtii LLAP12] Length = 143 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 53/146 (36%), Positives = 74/146 (50%), Gaps = 7/146 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A E+A A E+PVGAV V N +++ + N + D + HAE+ IR + L Sbjct: 1 MQQAYEQAFLAQNEGEVPVGAVLVSNEGELLGASRNAVQNSHDPSDHAEVRVIRQAAQQL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFYTLATCH 123 L + LYVTLEPC MCA I ARI+R+ + + K G + N Q Y L + Sbjct: 61 KNHRLLDTTLYVTLEPCPMCAGLIVHARIKRVVFATRDFKAGAAGSVYNLLQGYPL---N 117 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H +I GI + ++ DFFK R Sbjct: 118 HKVQIDEGIMQSECALLLSDFFKACR 143 >gi|158318268|ref|YP_001510776.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec] gi|158113673|gb|ABW15870.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec] Length = 185 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 56/111 (50%) Query: 37 ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96 + R N D TAHAE++A+R L L L VTLEPCTMCA A+ LAR+ Sbjct: 60 LGRGHNAREAAGDPTAHAEVVALRQAAARLGSWRLTGATLVVTLEPCTMCAGALVLARVD 119 Query: 97 RLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 RL YGA + K G + + +H PE+ G+ Q + + FF + Sbjct: 120 RLVYGAVDDKAGAVGSLWDVVRDRRLNHRPEVVAGVRGQECSEQLAAFFAD 170 >gi|108805662|ref|YP_645599.1| tRNA-adenosine deaminase [Rubrobacter xylanophilus DSM 9941] gi|108766905|gb|ABG05787.1| tRNA-adenosine deaminase [Rubrobacter xylanophilus DSM 9941] Length = 167 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 51/128 (39%), Positives = 69/128 (53%), Gaps = 4/128 (3%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV ++++ A N D TAHAE+LAIR L L LY TLEPC Sbjct: 38 VPVGAVVARGEEVLALASNEREATGDPTAHAELLAIRRAAAALGGWRLTGCTLYSTLEPC 97 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CHHSPEIYPGISEQRSRQII 141 MCA A AR+ R+ Y A +PK G GT T + +H+ + G+ Q S ++ Sbjct: 98 PMCAGAAWAARLSRIVYAAPDPKAG--YAGTLHNTPSDRRLNHTASVLGGLLAQESATLL 155 Query: 142 QDFFKERR 149 +DFF+ERR Sbjct: 156 RDFFRERR 163 >gi|78047755|ref|YP_363930.1| putative cytidine / deoxycytidylate deaminase family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036185|emb|CAJ23876.1| putative cytidine / deoxycytidylate deaminase family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 169 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 6/147 (4%) Query: 7 FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL+ A+ A +EIPVGA+ V ++ N N D +AHAEI+A+R R Sbjct: 18 WMRHALQLAERAERDYDEIPVGALLVDAQGNVLGEGWNFNIASHDPSAHAEIVAMREAGR 77 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L+ L LYVTLEPC MCA A+ ARI R+ + AS+PK G G+ F LA H Sbjct: 78 RLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 135 Query: 125 SP--EIYPGISEQRSRQIIQDFFKERR 149 + ++ G+ + + ++F+ +R Sbjct: 136 NHRVQVCGGVLAAEASLRLTNYFRAKR 162 >gi|325928669|ref|ZP_08189845.1| tRNA-adenosine deaminase [Xanthomonas perforans 91-118] gi|325540965|gb|EGD12531.1| tRNA-adenosine deaminase [Xanthomonas perforans 91-118] Length = 171 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 6/147 (4%) Query: 7 FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL+ A+ A +EIPVGA+ V ++ N N D +AHAEI+A+R R Sbjct: 20 WMRHALQLAERAERDYDEIPVGALLVDAQGNVLGEGWNFNIASHDPSAHAEIVAMREAGR 79 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L+ L LYVTLEPC MCA A+ ARI R+ + AS+PK G G+ F LA H Sbjct: 80 RLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 137 Query: 125 SP--EIYPGISEQRSRQIIQDFFKERR 149 + ++ G+ + + ++F+ +R Sbjct: 138 NHRVQVCGGVLAAEASLRLTNYFRAKR 164 >gi|87302789|ref|ZP_01085600.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. WH 5701] gi|87282672|gb|EAQ74630.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. WH 5701] Length = 169 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 3/143 (2%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMG 62 +M L AQ A EIPV A+ VL+ + + NR + +D HAE++A+ Sbjct: 13 QFWMERLLRMAQRAGEAGEIPVAAI-VLDGAGRALGWGTNRRQTHQDPLGHAELVALSQA 71 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R++ L VTLEPC MCA A+ AR+ R+ + A + K G + + Sbjct: 72 ARLIHDWRFNACSLLVTLEPCPMCAGALIQARMGRVVFAAGDAKRGALGGCLNLAADPSS 131 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 HH E+ G+ E +R++++ +F Sbjct: 132 HHHMEVMGGVRELEARELLESWF 154 >gi|195953373|ref|YP_002121663.1| CMP/dCMP deaminase zinc-binding [Hydrogenobaculum sp. Y04AAS1] gi|195932985|gb|ACG57685.1| CMP/dCMP deaminase zinc-binding [Hydrogenobaculum sp. Y04AAS1] Length = 147 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 4/99 (4%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71 LE + A ++ IPV A+ N++I+S A N + ++ HAEILAI +L+ + L Sbjct: 11 LELCKEAIAQDRIPVSALVTKNDEIVSWAFNGIKSIE----HAEILAIEKAMNVLNTKRL 66 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 D+YV+LEPC MC AISLARI ++Y+ + + K G I Sbjct: 67 DGCDIYVSLEPCPMCTYAISLARIEKVYFFSLDDKNGAI 105 >gi|206895932|ref|YP_002246819.1| tRNA-specific adenosine deaminase [Coprothermobacter proteolyticus DSM 5265] gi|206738549|gb|ACI17627.1| tRNA-specific adenosine deaminase [Coprothermobacter proteolyticus DSM 5265] Length = 154 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 61/108 (56%) Query: 42 NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 N + D TAHAE++A+R + + L +YVTLEPC MC A+ LAR+ R+ +G Sbjct: 45 NLREQSHDPTAHAEVVALRDAAAHMGRWNLSGATVYVTLEPCLMCCYALVLARVDRVVFG 104 Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A++ K G + F +L +H E+ G+ E+ +++ FF++ R Sbjct: 105 ATDQKAGALVTHMDFLSLPFLNHRFEVRGGVLEKSCSKLLSSFFRKLR 152 >gi|290978118|ref|XP_002671783.1| predicted protein [Naegleria gruberi] gi|284085355|gb|EFC39039.1| predicted protein [Naegleria gruberi] Length = 214 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 23/166 (13%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++M AL AQ A E+PVG V V +NKI+ R N+ + K+ T HAE+ A Sbjct: 20 IYMREALNMAQKALEELEVPVGCVIVHDNKIVGRGYNKTNQKKNATRHAELEAFDEITEN 79 Query: 66 LSQEI------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQ- 115 S+E+ E LYVT+EPC MCA+A+ L +I R+ G N + GG + N Q Sbjct: 80 YSEELNNNVNFFKECTLYVTVEPCVMCASALILLKIGRVVCGCMNERFGGCGSVLNIHQS 139 Query: 116 -FYTLATCHHSP------------EIYPGISEQRSRQIIQDFFKER 148 + +L HH E G+ E+ +I+Q F+++ Sbjct: 140 CYNSLNHNHHHDQHGNNNQLNWKYECVHGLFEKECIEILQRFYEQE 185 >gi|296413803|ref|XP_002836598.1| hypothetical protein [Tuber melanosporum Mel28] gi|295630426|emb|CAZ80789.1| unnamed protein product [Tuber melanosporum] Length = 179 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 46/103 (44%), Positives = 61/103 (59%), Gaps = 2/103 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-RNRELKDVTAHAEILAIRMGCRIL 66 M AL+ A +A NE+PVG V V ++II+ N NR L T HAE++AI Sbjct: 1 MQSALQIATSALQSNEVPVGCVFVHGSRIIASGRNDTNRSLCG-TRHAELVAIDKILATH 59 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 I E DLYVT+EPC MCA+A+ IR++Y+G SN + GG Sbjct: 60 PPSIFKETDLYVTVEPCIMCASALRQIGIRKVYFGCSNDRFGG 102 >gi|114046813|ref|YP_737363.1| tRNA-adenosine deaminase [Shewanella sp. MR-7] gi|113888255|gb|ABI42306.1| tRNA-adenosine deaminase [Shewanella sp. MR-7] Length = 222 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 62/127 (48%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V + I+ N + D AHAEI +R + + L + LYVTLEP Sbjct: 78 EVPVGAVLVKEGQQIAAGYNLSISEHDPCAHAEIQCLRAAGQTIENYRLLDTTLYVTLEP 137 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCA A+ +RI R+ +GA + K G +H E+ G+ Q + Sbjct: 138 CAMCAGAMVHSRIARVVFGAKDEKTGAAGTVLNLLQHPAFNHQVEVASGVLAQDCADQLS 197 Query: 143 DFFKERR 149 FFK RR Sbjct: 198 RFFKRRR 204 >gi|256080810|ref|XP_002576669.1| cytidine/deoxycytidylate deaminase-related [Schistosoma mansoni] gi|238661948|emb|CAZ32906.1| cytidine/deoxycytidylate deaminase-related [Schistosoma mansoni] Length = 165 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 21/155 (13%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR---MGCR 64 M A E A A NE+PVG V N ++I+ N +D T HAE++ IR CR Sbjct: 1 MDIAFELACEALRCNEVPVGCAFVYNGEVIASGRNEVNATRDATQHAEMVTIRRLEQWCR 60 Query: 65 ILSQE---ILPEVDLYVTLEPCTMCAAAISL---ARIRRLYYGASNPKGGGIENGTQFYT 118 +E IL E DL+VT+EPC MCAAAI A ++ + YGA N + GG + Sbjct: 61 NNQKELDKILVECDLFVTVEPCIMCAAAIRFCLPAHLKSITYGARNERFGGCG------S 114 Query: 119 LATCHHSPE-IYP-----GISEQRSRQIIQDFFKE 147 + + H+SP + P G+ + + ++++ F+ + Sbjct: 115 VLSVHNSPSAVAPLNCISGVEAEAAVELLKKFYAQ 149 >gi|58581831|ref|YP_200847.1| hypothetical protein XOO2208 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623733|ref|YP_451105.1| hypothetical protein XOO_2076 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188576614|ref|YP_001913543.1| tRNA-specific adenosine deaminase [Xanthomonas oryzae pv. oryzae PXO99A] gi|58426425|gb|AAW75462.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367673|dbj|BAE68831.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188521066|gb|ACD59011.1| tRNA-specific adenosine deaminase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 170 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 6/147 (4%) Query: 7 FMSCALEEAQNAAL-RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL A+ A +EIPVGA+ V ++ N N D +AHAEI+A+R R Sbjct: 19 WMQHALHLAECAERDHDEIPVGALIVGAEGNVLGEGWNFNIASHDPSAHAEIVAMRDAGR 78 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 LS L LYVTLEPC MCA A+ ARI R+ + AS+PK G G+ F LA H Sbjct: 79 RLSNHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 136 Query: 125 SPEIY--PGISEQRSRQIIQDFFKERR 149 + + G+ + + ++F+ +R Sbjct: 137 NHRVRVCGGVLAAEASLRLTNYFRAKR 163 >gi|170106123|ref|XP_001884273.1| predicted protein [Laccaria bicolor S238N-H82] gi|164640619|gb|EDR04883.1| predicted protein [Laccaria bicolor S238N-H82] Length = 183 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 6/109 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR--MGCR 64 +M AL A+ A +E+PVG V V + II++A NR EL + T HAE+ AI M R Sbjct: 8 WMREALTMAEEALAASEVPVGCVFVRDGIIIAKARNRTNELCNATRHAELEAIDSIMADR 67 Query: 65 ILSQEI----LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 L+ EI L LYVT+EPC MCA+A+ I+ ++YG +N + GG Sbjct: 68 SLTPEISEYPLSNTTLYVTVEPCIMCASALRQMGIKEVFYGCANDRFGG 116 >gi|317153179|ref|YP_004121227.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio aespoeensis Aspo-2] gi|316943430|gb|ADU62481.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio aespoeensis Aspo-2] Length = 165 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A +A AA E P+GA + +++ A N L D TAHAE+L +R Sbjct: 17 LMDVAFAQACMAAKEGESPIGAALFAPDGALLAAARNNPVGLNDPTAHAEVLCLRQAAAR 76 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L L VTLEPC MC A+ AR+ + GA +P+ G + + Q + L +H Sbjct: 77 LGNYRLTGTILAVTLEPCLMCTGALIHARVAGVVMGALDPRAGAVISNLQGHALPFANHR 136 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 G+ E+ +++ FF E+R Sbjct: 137 MWFVQGVMEEECSTLLKRFFLEKR 160 >gi|194743340|ref|XP_001954158.1| GF18139 [Drosophila ananassae] gi|190627195|gb|EDV42719.1| GF18139 [Drosophila ananassae] Length = 160 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 9/146 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC--- 63 FM A EA+ A E+PVG V VL +K+I+R GN ++ T HAE + I Sbjct: 4 FMEEAFIEARRARDAGEVPVGCVFVLGDKVIARGGNEVNVHRNATRHAEFICIDATLAYC 63 Query: 64 ---RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R+ ++++ E+ + VT+EPC MC+AA+ ++ + YG N + GG T A Sbjct: 64 REKRLPARQMFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVAA 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 +I G+ + ++++F+K Sbjct: 121 VVGQRIDITGGVRADEAMALLKEFYK 146 >gi|298714567|emb|CBJ27558.1| conserved unknown protein [Ectocarpus siliculosus] Length = 504 Score = 77.0 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 12/153 (7%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL----------KDVTAHAEI 56 FM AL A A + E+P+GA+ L + +R R R L +D +AHAE+ Sbjct: 338 FMRMALRLAGRARMEGEVPIGAI--LAETVPTRRDGRRRVLSTGRNEVEGRRDASAHAEM 395 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L ++ + S L LYVT+EPC MC +A L R+ R+ +GA NP G Sbjct: 396 LCLQAAAKARSNWRLAGTTLYVTVEPCAMCLSAAQLFRVDRVVFGAPNPNLGACGGWVDL 455 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + H E+ G+ + ++ FF+ RR Sbjct: 456 SSQRHAFHELEVKGGVLAEECALPLRGFFRSRR 488 >gi|30021149|ref|NP_832780.1| cytosine deaminase [Bacillus cereus ATCC 14579] gi|29896702|gb|AAP09981.1| Cytosine deaminase [Bacillus cereus ATCC 14579] Length = 169 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 47/106 (44%), Positives = 62/106 (58%), Gaps = 3/106 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR-MGCR 64 F+ ALEEA+ A N PVGAV V NN +I+R NR KD+TAHAE+ AIR G Sbjct: 9 FLQMALEEAEKALKENTYPVGAVIVDGNNNVIARGRNRVHPEKDITAHAELDAIRNAGEA 68 Query: 65 ILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 + +I E +Y TLEPC MC I A+I+R+ + ++ G G Sbjct: 69 MFDAKIKNERFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFG 114 >gi|298252974|ref|ZP_06976766.1| cytidine and deoxycytidylate deaminase [Gardnerella vaginalis 5-1] gi|297532369|gb|EFH71255.1| cytidine and deoxycytidylate deaminase [Gardnerella vaginalis 5-1] Length = 153 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 54/154 (35%), Positives = 80/154 (51%), Gaps = 8/154 (5%) Query: 1 MKKGNVF-MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEIL 57 M+ VF M+ AL A+ +A E+PVGAV VL+ II + N + D AHAE+L Sbjct: 3 MRDEIVFAMNQALNLARESASAGEVPVGAV-VLDGGGNIIGKGANMREQSADPLAHAEVL 61 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 A++ L + L VTLEPC MCA A+ R++R+ +GA + K G G+ + Sbjct: 62 AMKDAAASRKSWNLSDCTLVVTLEPCPMCAGAVLQTRLKRVIFGAWDAKLGAC--GSVWD 119 Query: 118 TLATCH--HSPEIYPGISEQRSRQIIQDFFKERR 149 L H PE+ + E Q +++FF +R Sbjct: 120 ILRDPHVGSRPEVIGSVCESECAQPLRNFFAHQR 153 >gi|255625685|gb|ACU13187.1| unknown [Glycine max] Length = 186 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 1/102 (0%) Query: 2 KKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ + F+ A+EEA + + P GA+ V N++I++R N D TAHAE+ IR Sbjct: 29 QRDHKFLRIAVEEAYKGVDCEDGGPFGAIIVCNDEIVARCHNMVLRNTDPTAHAEVTVIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 C L+Q L + ++Y + EPC MC AI L+R++RL YGA Sbjct: 89 KACEKLNQIELSDCEIYASCEPCPMCFGAIHLSRVKRLVYGA 130 >gi|331694222|ref|YP_004330461.1| CMP/dCMP deaminase zinc-binding protein [Pseudonocardia dioxanivorans CB1190] gi|326948911|gb|AEA22608.1| CMP/dCMP deaminase zinc-binding protein [Pseudonocardia dioxanivorans CB1190] Length = 153 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 53/140 (37%), Positives = 76/140 (54%), Gaps = 1/140 (0%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A++ A+ A ++P+GAV V + ++ A N L D TAHAEILA+R +L + Sbjct: 14 AIDVARGALGTGDVPIGAVVVDASGAEVATACNAREALGDPTAHAEILALRAAAAVLGEW 73 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 L L VTLEPCTMCA AI LAR+ R+ +GA P+ G + +H PE+ Sbjct: 74 RLTGCTLVVTLEPCTMCAGAIWLARVPRVVFGAWEPRTGAAGSLWDVLRDRRLNHRPEVV 133 Query: 130 PGISEQRSRQIIQDFFKERR 149 G+ +++DFF E R Sbjct: 134 GGVLADECAALLEDFFGELR 153 >gi|291521262|emb|CBK79555.1| Cytosine/adenosine deaminases [Coprococcus catus GD/7] Length = 160 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 63/124 (50%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 +E+P+G V V KII+R N+ + K+ +HAE+ AIR + L L +Y+TLE Sbjct: 22 DEVPIGCVIVYEGKIIARGYNKRNKEKNTLSHAEMNAIRKASKYLGDWRLEGCTMYITLE 81 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI AR+ R+ G+ N K G + +H E+ + + ++ Sbjct: 82 PCPMCAGAIVQARVDRVVIGSMNAKAGCAGSVLNVLQERRFNHQVELTKDVLHEECSSML 141 Query: 142 QDFF 145 FF Sbjct: 142 SGFF 145 >gi|213025788|ref|ZP_03340235.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 98 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/88 (46%), Positives = 53/88 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G +L Sbjct: 11 WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLAR 94 L + LYVTLEPC MCA A+ +R Sbjct: 71 QNYRLLDTTLYVTLEPCVMCAGAMVHSR 98 >gi|154508436|ref|ZP_02044078.1| hypothetical protein ACTODO_00935 [Actinomyces odontolyticus ATCC 17982] gi|153798070|gb|EDN80490.1| hypothetical protein ACTODO_00935 [Actinomyces odontolyticus ATCC 17982] Length = 435 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/139 (38%), Positives = 68/139 (48%), Gaps = 1/139 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A ++PVGAV V N +II R N D HAEI+A+R R Sbjct: 1 MGKALFLANRARETGDVPVGAVVVDENGRIIGRGWNCREANHDPAGHAEIVALREAGRSR 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA AI +RI R+ +GA +PK G + A H Sbjct: 61 GTWRLTGCTLIVTLEPCTMCAGAILASRIDRVVFGAWDPKAGAAGSLRDVLRDARMPHPT 120 Query: 127 EIYPGISEQRSRQIIQDFF 145 E+ G+ Q + ++ FF Sbjct: 121 EVIGGVLAQEAAMQLRSFF 139 >gi|195443952|ref|XP_002069651.1| GK11635 [Drosophila willistoni] gi|194165736|gb|EDW80637.1| GK11635 [Drosophila willistoni] Length = 160 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 9/146 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG---C 63 FM AL EA+ A E+PVG V V +K+I+R GN ++ T HAE + I C Sbjct: 4 FMEDALVEARRARDAGEVPVGCVFVYGDKVIARGGNEVNVYRNATRHAEFICIDATLAYC 63 Query: 64 R---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + ++++ E+ + VT+EPC MC+AA+ ++ + YG N + GG T A Sbjct: 64 REKHLPARQLFAEISVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVAA 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 I G+ + ++++F+K Sbjct: 121 VVGQRISIIGGVRGDEAMALLKEFYK 146 >gi|24374802|ref|NP_718845.1| cytidine/deoxycytidylate deaminase family protein [Shewanella oneidensis MR-1] gi|24349479|gb|AAN56289.1|AE015766_5 cytidine/deoxycytidylate deaminase family protein [Shewanella oneidensis MR-1] Length = 194 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 62/126 (49%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V + I+ N + D AHAEIL +R + + L + LYVTLEPC Sbjct: 54 VPVGAVLVKDGLQIATGYNLSISQHDPCAHAEILCLRAAGQTVENYRLLDATLYVTLEPC 113 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA A+ +RI R+ +GA + K G +H E+ G+ Q + Sbjct: 114 AMCAGAMVHSRIARVVFGARDEKTGAAGTVLNLLQHPAFNHQVEVTSGVLAQDCADQLSR 173 Query: 144 FFKERR 149 FFK RR Sbjct: 174 FFKRRR 179 >gi|225451245|ref|XP_002276494.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|298204906|emb|CBI34213.3| unnamed protein product [Vitis vinifera] Length = 186 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F++ A+EEA + + P GAV V N++++ N D TAHAE+ AIR C+ Sbjct: 34 FLTAAVEEAYKGVECGDGGPFGAVVVHNDEVLVSCHNMVLTNTDPTAHAEVTAIREACKK 93 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L+Q L + ++Y + EPC MC AI L+RI+RL YGA Sbjct: 94 LNQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 130 >gi|148228295|ref|NP_001089483.1| tRNA-specific adenosine deaminase 2 [Xenopus laevis] gi|82225873|sp|Q4V7V8|ADAT2_XENLA RecName: Full=tRNA-specific adenosine deaminase 2; AltName: Full=Deaminase domain-containing protein 1; AltName: Full=tRNA-specific adenosine-34 deaminase subunit ADAT2 gi|66912051|gb|AAH97698.1| MGC115242 protein [Xenopus laevis] Length = 175 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 28/160 (17%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63 +M A + AQ+A E+PVG + V N+++ + N E K+ T HAE++AI C Sbjct: 13 WMHKAFQMAQDALNNGEVPVGCLMVYGNQVVGKGRNEVNETKNATQHAEMVAIDQVLDWC 72 Query: 64 RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI---------- 110 + S+ ++ + LYVT+EPC MCA A+ L +I + YG N + GG Sbjct: 73 EMNSKKSTDVFENIVLYVTVEPCIMCAGALRLLKIPLVVYGCRNERFGGCGSVLNVSGDD 132 Query: 111 --ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + GT+F + G +++ ++++ F+K+ Sbjct: 133 IPDTGTKFKCIG----------GYQAEKAIELLKTFYKQE 162 >gi|114609579|ref|XP_518775.2| PREDICTED: hypothetical protein LOC463037 isoform 2 [Pan troglodytes] Length = 191 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 8/149 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63 +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI C Sbjct: 25 WMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWC 84 Query: 64 RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118 R + E+ LYVT+EPC MCAAA+ L +I + YG N + GG + + Sbjct: 85 RQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 144 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 145 LPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173 >gi|3204108|emb|CAA07230.1| putative cytidine deaminase [Cicer arietinum] Length = 186 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A+EEA + + P GAV V N+++++ N D TAHAE+ AIR C+ Sbjct: 34 FLRKAVEEAYKGVDCGDGGPFGAVIVHNDEVVASCHNMVLNYTDPTAHAEVTAIREACKK 93 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L Q L + ++Y + EPC MC AI L+RI+RL YGA Sbjct: 94 LKQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 130 >gi|124107608|ref|NP_872309.2| tRNA-specific adenosine deaminase 2 [Homo sapiens] gi|74750199|sp|Q7Z6V5|ADAT2_HUMAN RecName: Full=tRNA-specific adenosine deaminase 2; AltName: Full=Deaminase domain-containing protein 1; AltName: Full=tRNA-specific adenosine-34 deaminase subunit ADAT2 gi|31652308|emb|CAD92490.1| novel protein similar to yeast and bacterial cytosine deaminase [Homo sapiens] gi|119568252|gb|EAW47867.1| deaminase domain containing 1, isoform CRA_a [Homo sapiens] Length = 191 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 8/149 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63 +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI C Sbjct: 25 WMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWC 84 Query: 64 RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118 R + E+ LYVT+EPC MCAAA+ L +I + YG N + GG + + Sbjct: 85 RQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 144 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 145 LPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173 >gi|220934212|ref|YP_002513111.1| tRNA-specific adenosine deaminase [Thioalkalivibrio sp. HL-EbGR7] gi|219995522|gb|ACL72124.1| tRNA-specific adenosine deaminase [Thioalkalivibrio sp. HL-EbGR7] Length = 162 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 68/128 (53%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V + +++ N D TAHAEI A+R + LP LYVTLE Sbjct: 30 GEVPVGAVLVRDGELLGEGCNGPIAAHDPTAHAEIAALRAAAARVGNYRLPGATLYVTLE 89 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC A+ AR+ RL YGA++PK G + + +H E+ G+ + + + Sbjct: 90 PCPMCVGAMIHARVARLVYGAADPKTGAVGGALDLLGHPSHNHRIEVTGGVLAETCAEQL 149 Query: 142 QDFFKERR 149 + FF+ RR Sbjct: 150 RAFFRTRR 157 >gi|113816713|gb|AAH37955.2| ADAT2 protein [Homo sapiens] Length = 193 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 8/149 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63 +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI C Sbjct: 27 WMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWC 86 Query: 64 RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118 R + E+ LYVT+EPC MCAAA+ L +I + YG N + GG + + Sbjct: 87 RQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 146 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 147 LPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 175 >gi|256823046|ref|YP_003147009.1| CMP/dCMP deaminase zinc-binding [Kangiella koreensis DSM 16069] gi|256796585|gb|ACV27241.1| CMP/dCMP deaminase zinc-binding [Kangiella koreensis DSM 16069] Length = 159 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 74/142 (52%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A + A A + E+PVGAV + +I + N+ D TAHAE++ +R + L Sbjct: 12 MQRAFDLASIAEEKGEVPVGAVLAKDGEIKTEGFNQPIFNHDPTAHAEMVVLRAAGQKLD 71 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ AR+ R+ + ++P+ G + + +H Sbjct: 72 NYRLVDTTLYVTLEPCAMCAMAMVHARVSRVVFATTDPRTGAAGSVLNILQNPSFNHQCV 131 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ ++ + ++ FF+ +R Sbjct: 132 VESGLLQEDCSEQLKRFFRNKR 153 >gi|319948568|ref|ZP_08022697.1| cytidine and deoxycytidylate deaminase family protein [Dietzia cinnamea P4] gi|319437767|gb|EFV92758.1| cytidine and deoxycytidylate deaminase family protein [Dietzia cinnamea P4] Length = 143 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/130 (36%), Positives = 70/130 (53%), Gaps = 2/130 (1%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79 ++PVGAV + + ++ A NR D AHAE+LA+R R+L L + L VT Sbjct: 14 EDVPVGAVVIGPDGTELAAATNRRETDGDPFAHAEVLALREAARVLGDGWRLEDCTLVVT 73 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPCTMCA A AR+ R+ +GA P+ G + H PE++ G+ E Sbjct: 74 LEPCTMCAGAAVAARVGRIVFGAWEPRTGACGSLWDVVRDRRLVHRPEVHGGVLEDECAA 133 Query: 140 IIQDFFKERR 149 +++DFF+ RR Sbjct: 134 VLEDFFRARR 143 >gi|309812017|ref|ZP_07705783.1| cytidine and deoxycytidylate deaminase zinc-binding region [Dermacoccus sp. Ellin185] gi|308434075|gb|EFP57941.1| cytidine and deoxycytidylate deaminase zinc-binding region [Dermacoccus sp. Ellin185] Length = 159 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/146 (33%), Positives = 69/146 (47%), Gaps = 1/146 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGC 63 + +M ALE A+ ++PVGA+ V + + G RE+ D T HAEI+A+R Sbjct: 14 DAWMGRALELAREVGAAGDVPVGALVVDPDGEVIGVGANLREVDGDPTGHAEIVAMRRAA 73 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L L VTLEPC MCA A AR+ R+ GA + K G + Sbjct: 74 ASRGGWRLDGCTLVVTLEPCLMCAGAAVQARLPRIVLGAWDRKAGACGGLWDVVRDSRST 133 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI E ++++FF RR Sbjct: 134 HRIEVVGGIREDECSAVLKEFFATRR 159 >gi|172041612|ref|YP_001801326.1| putative cytosine/adenosine deaminase [Corynebacterium urealyticum DSM 7109] gi|171852916|emb|CAQ05892.1| putative cytosine/adenosine deaminase [Corynebacterium urealyticum DSM 7109] Length = 198 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 3/130 (2%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79 ++PVGA+ V + +++ A NR + D AHAE+LA+R R L L L VT Sbjct: 70 GDVPVGALVVDADGTVLATATNRREQDADPLAHAEVLALRQAVRALGDSWRLERCTLVVT 129 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA A AR+ R+ +GA P+ G + A H + E+ G+ + Q Sbjct: 130 LEPCAMCAGAALGARVGRIVFGAYEPRTGACGSVWDLPREALLHKA-EVRGGVLQPECEQ 188 Query: 140 IIQDFFKERR 149 +++ FF++ R Sbjct: 189 LLRGFFEKLR 198 >gi|254459431|ref|ZP_05072850.1| guanine deaminase [Campylobacterales bacterium GD 1] gi|207083841|gb|EDZ61134.1| guanine deaminase [Campylobacterales bacterium GD 1] Length = 152 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/147 (35%), Positives = 75/147 (51%), Gaps = 5/147 (3%) Query: 5 NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 N +M A +EA L N+ P GAV V ++KIIS+A N+ + D TAHAE+ AIR Sbjct: 2 NKWMKIAYDEATEGMLANDGGPFGAVIVKDDKIISQAHNQVLKSNDPTAHAEVNAIRKAS 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG--GGIENGTQFYTLAT 121 +L L LY + PC MC AI ARI +YY A+ GG ++ +FY + Sbjct: 62 EVLETFDLSGCVLYTSCMPCPMCLGAIFWARIETVYYSATEEDAARGGFDD-KRFYEMLD 120 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148 +S I + S ++ D + E+ Sbjct: 121 GKNSALNLKRIDAENSTKLF-DLWLEK 146 >gi|255076837|ref|XP_002502085.1| predicted protein [Micromonas sp. RCC299] gi|226517350|gb|ACO63343.1| predicted protein [Micromonas sp. RCC299] Length = 193 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 8/112 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI-----RMG 62 M ALEEA+ A R E+PVG V V + ++++ NR E ++ T HAE A+ R G Sbjct: 1 MRVALEEAEGALARWEVPVGCVVVRDGEVVASGSNRTNEKRNGTRHAEFEAVDELLARHG 60 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 ++ LYVT+EPC MCA A+SL R+ YG N K GG NG+ Sbjct: 61 GDAVAAG-FDRCSLYVTVEPCIMCAGALSLLGFERVTYGCGNDKFGG--NGS 109 >gi|289643685|ref|ZP_06475797.1| CMP/dCMP deaminase zinc-binding [Frankia symbiont of Datisca glomerata] gi|289506518|gb|EFD27505.1| CMP/dCMP deaminase zinc-binding [Frankia symbiont of Datisca glomerata] Length = 163 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 67/129 (51%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PVGAV V + II R N +D TAHAE++A+R L L VTL Sbjct: 30 GDVPVGAVVVDADGTIIGRGRNAREAERDPTAHAEVVALRAAAARAGTWRLSGTTLVVTL 89 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A+ +AR+ RL YGA +P+ G + H E+ G+ E+ ++ Sbjct: 90 EPCAMCAGALIMARVDRLVYGAYDPRAGAAGSLWDTVRDPRLDHHTEVITGVREEECARL 149 Query: 141 IQDFFKERR 149 + DFF RR Sbjct: 150 LTDFFVARR 158 >gi|162450858|ref|YP_001613225.1| putative zinc-binding hydrolase [Sorangium cellulosum 'So ce 56'] gi|161161440|emb|CAN92745.1| putative zinc-binding hydrolase [Sorangium cellulosum 'So ce 56'] Length = 177 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 1/128 (0%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 ++PVGA+ V +++R NR +D T HAE+ A+R R L L +Y TLE Sbjct: 44 DVPVGALVVDAAGTVLARGRNRREIDQDPTGHAEVDALRAAARRLGHWRLEGATVYATLE 103 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA A+ ARI RL YG +PK G ++ +H + G+ ++ Sbjct: 104 PCPMCAGALVNARIARLVYGCPDPKAGAVDTLFAIGRDNRLNHRFAVTSGVLADECAGVL 163 Query: 142 QDFFKERR 149 + FF + R Sbjct: 164 RAFFAKLR 171 >gi|254525362|ref|ZP_05137414.1| cytosine/adenosine deaminase [Prochlorococcus marinus str. MIT 9202] gi|221536786|gb|EEE39239.1| cytosine/adenosine deaminase [Prochlorococcus marinus str. MIT 9202] Length = 171 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 1/128 (0%) Query: 23 EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+P+ ++ + + I R NR KD HAEI+A+R I + E + LE Sbjct: 41 ELPICSIILDERGRCIGRGVNRRNINKDPLGHAEIMALRQASLIKNDWRFNECTIITNLE 100 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PCTMC++A+ AR+ ++ +GA + K GG+ + HH EI G+ E +I+ Sbjct: 101 PCTMCSSALIQARMGKVIFGAYDKKRGGLGGSIDLSKHESAHHKMEIIGGLLEDECSKIL 160 Query: 142 QDFFKERR 149 Q +FK+ R Sbjct: 161 QIWFKKLR 168 >gi|123968475|ref|YP_001009333.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. AS9601] gi|123198585|gb|ABM70226.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. AS9601] Length = 145 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 66/128 (51%), Gaps = 1/128 (0%) Query: 23 EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+P+ ++ + + I R N KD HAEI+A+R I + E + LE Sbjct: 15 ELPICSIILDERGRCIGRGVNSRNINKDPLGHAEIMALRQASLIKNDWRFNECTIITNLE 74 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PCTMC++A+ AR+ ++ +GA + K GG+ + HH EI GI E QI+ Sbjct: 75 PCTMCSSALIQARMGKVIFGAYDKKRGGLGGSIDLSKHESAHHKMEIIGGILEDECSQIL 134 Query: 142 QDFFKERR 149 Q +FK+ R Sbjct: 135 QIWFKKLR 142 >gi|325287796|ref|YP_004263586.1| Guanine deaminase [Cellulophaga lytica DSM 7489] gi|324323250|gb|ADY30715.1| Guanine deaminase [Cellulophaga lytica DSM 7489] Length = 156 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 5/110 (4%) Query: 12 LEEAQNAALR----NEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 ++EA NAAL+ NE P G V V + KII + N+ D TAHAE+ AIR C+ L Sbjct: 7 MQEAVNAALKGMQNNEGGPFGCVIVKDGKIIGKGNNKVTSTNDPTAHAEVTAIRDACKNL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + L +Y + EPC MC AI AR ++YYG+S I +F Sbjct: 67 NSFQLDGCIIYTSCEPCPMCLGAIYWARPEKVYYGSSQADAANIGFDDEF 116 >gi|311741106|ref|ZP_07714931.1| cytidine and deoxycytidylate deaminase [Corynebacterium pseudogenitalium ATCC 33035] gi|311303908|gb|EFQ79986.1| cytidine and deoxycytidylate deaminase [Corynebacterium pseudogenitalium ATCC 33035] Length = 143 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/144 (34%), Positives = 72/144 (50%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+ A+ A ++PVGAV ++ NR EL D TAHAE+ AIR R+ Sbjct: 1 MRRALDVAKRAPA-GDVPVGAVLYDAAGTELATGVNRREELADPTAHAEVEAIRQAVRVH 59 Query: 67 SQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L +L VTLEPC MCA A+ AR+ + +GA PK G + T + Sbjct: 60 GDGWRLSGCELVVTLEPCAMCAGALQAARVSSVVFGAFEPKTGACGSLIDVLRAPTAPFT 119 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P++ G+ E ++++FF R Sbjct: 120 PQVRGGVLEGECAGLLRNFFDGLR 143 >gi|121714253|ref|XP_001274737.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein [Aspergillus clavatus NRRL 1] gi|119402891|gb|EAW13311.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein [Aspergillus clavatus NRRL 1] Length = 191 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 72/139 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL + A E PVG V V + ++I N + + T HAE +AI R Sbjct: 21 FMKQALLMGEKALEIGETPVGCVLVRDGQLIGSGMNDTNKSMNGTRHAEFIAIEEMLRSH 80 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + +L DLYVT+EPC MCA+A+ +IR +Y+G +N + GG + ++ T Sbjct: 81 PRSLLRSTDLYVTVEPCVMCASALRQYQIRSVYFGCANERFGGTGSILSLHSDPTLDPPY 140 Query: 127 EIYPGISEQRSRQIIQDFF 145 ++ G+ + + +++ F+ Sbjct: 141 PVHGGLFREEAIMLLRRFY 159 >gi|109072525|ref|XP_001091638.1| PREDICTED: tRNA-specific adenosine deaminase 2 isoform 1 [Macaca mulatta] Length = 191 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 8/149 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63 +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI C Sbjct: 25 WMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWC 84 Query: 64 RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118 R + E+ LYVT+EPC MCAAA+ L +I + YG N + GG + + Sbjct: 85 RRSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 144 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 145 LPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173 >gi|166712352|ref|ZP_02243559.1| hypothetical protein Xoryp_13070 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 170 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 6/147 (4%) Query: 7 FMSCALEEAQNAAL-RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL A+ A +EIPVGA+ + ++ N N D +AHAEI+A+R R Sbjct: 19 WMQHALHLAECAERDHDEIPVGALILGAEGNVLGEGWNFNIASHDPSAHAEIVAMRDAGR 78 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 LS L LYVTLEPC MCA A+ ARI R+ + AS+PK G G+ F LA H Sbjct: 79 RLSNHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 136 Query: 125 SPEIY--PGISEQRSRQIIQDFFKERR 149 + + G+ + + ++F+ +R Sbjct: 137 NHRVRVCGGVLAAEASLRLTNYFRAKR 163 >gi|195501916|ref|XP_002098000.1| GE10118 [Drosophila yakuba] gi|194184101|gb|EDW97712.1| GE10118 [Drosophila yakuba] Length = 160 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 9/146 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL---AIRMGC 63 FM AL EA+ A E+PVG V V K+++R GN ++ T HAE + AI C Sbjct: 4 FMEEALVEARRARDAGEVPVGCVFVHGGKVVARGGNEVNVHRNATRHAEFICIDAILASC 63 Query: 64 R---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + ++++ E+ + VT+EPC MC+AA+ ++ + YG N + GG T A Sbjct: 64 RERRLPARQLFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVAA 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 +I G+ + ++++F+K Sbjct: 121 VVGQRIQITGGVRADEAMALLKEFYK 146 >gi|21322992|dbj|BAB97621.1| Cytosine/adenosine deaminases [Corynebacterium glutamicum ATCC 13032] Length = 139 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 2/130 (1%) Query: 22 NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79 ++PVGAV +I++ A NR +D TAHAEI+A+R R S L + VT Sbjct: 10 GDVPVGAVIYAPTGEILATATNRREADRDPTAHAEIIALRRAARRFSDGWRLSDCTAVVT 69 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC+MCA A+ ARI R+ +GA P+ G + H E+ GI E Sbjct: 70 LEPCSMCAGALVGARIGRIVFGAFEPRTGACGSVFDVVRDPAVLHKVEVSGGILEPECAA 129 Query: 140 IIQDFFKERR 149 ++ +FF+ R Sbjct: 130 LMTEFFELHR 139 >gi|332213485|ref|XP_003255854.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Nomascus leucogenys] Length = 191 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 8/149 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63 +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI C Sbjct: 25 WMEEAVRMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWC 84 Query: 64 RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118 R + E+ LYVT+EPC MCAAA+ L +I + YG N + GG + + Sbjct: 85 RQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 144 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 145 LPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173 >gi|56961816|ref|YP_173538.1| cytosine/adenosine deaminase [Bacillus clausii KSM-K16] gi|56908050|dbj|BAD62577.1| cytosine/adenosine deaminase [Bacillus clausii KSM-K16] Length = 165 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/128 (35%), Positives = 63/128 (49%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+P+GAV + K+I+ A N AHAE+LAI + L L LYVTLE Sbjct: 24 GEVPIGAVIIKEGKLIASAYNLREANHSALAHAELLAIEQANKKLGAWRLEGCTLYVTLE 83 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI +RI + YGA + K G +H E+ G+ E+ + + Sbjct: 84 PCPMCAGAIVQSRIPTVVYGAQDQKAGCAGTLMNLLQEQRFNHRCEVISGVLEEGCGEKL 143 Query: 142 QDFFKERR 149 FF++ R Sbjct: 144 SAFFRKLR 151 >gi|317034863|ref|XP_001400634.2| cytidine and deoxycytidylate deaminase zinc-binding domain protein [Aspergillus niger CBS 513.88] Length = 190 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 69/139 (49%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL + A E PVG V V + KI+ N + + T HAE +AI Sbjct: 19 FMKQALLMGEKALETGETPVGCVLVYDKKIVGFGMNDTNKSMNGTRHAEFIAIEEMLETY 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L DLYVT+EPC MCA+A+ +IR++Y+G N + GG + + + S Sbjct: 79 PRSALRSTDLYVTVEPCVMCASALRQYQIRKVYFGCGNDRFGGTGSILSLHADRSIDPSY 138 Query: 127 EIYPGISEQRSRQIIQDFF 145 + G+ + + +++ F+ Sbjct: 139 PVQGGLFHKEAIMLLRRFY 157 >gi|325289744|ref|YP_004265925.1| Guanine deaminase [Syntrophobotulus glycolicus DSM 8271] gi|324965145|gb|ADY55924.1| Guanine deaminase [Syntrophobotulus glycolicus DSM 8271] Length = 154 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/100 (44%), Positives = 55/100 (55%), Gaps = 1/100 (1%) Query: 5 NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 N+FM A EA+ E P GAV V K+I+ A N +D TAHAEI+AIR Sbjct: 2 NLFMQQAYREAKTGMTAGEGGPFGAVVVREGKVIASAHNIVLLTQDSTAHAEIVAIRKAE 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 R+L L +LY T PC MC AI ARI ++YYG + Sbjct: 62 RLLGTHDLSGCELYTTSYPCPMCLGAIMWARISKVYYGCT 101 >gi|226504812|ref|NP_001140513.1| hypothetical protein LOC100272576 [Zea mays] gi|194699798|gb|ACF83983.1| unknown [Zea mays] gi|195610442|gb|ACG27051.1| cytidine/deoxycytidylate deaminase family protein [Zea mays] Length = 186 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+S A+EEA + + P GAV V N+++I N + D TAHAE+ AIR C+ Sbjct: 34 FLSKAVEEAYRGVDCGDGGPFGAVVVHNDEVIVSCHNMVLKNTDPTAHAEVTAIREACKK 93 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L + L + ++Y + EPC MC A+ L+RI+RL YGA Sbjct: 94 LGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGA 130 >gi|297243273|ref|ZP_06927208.1| cytidine and deoxycytidylate deaminase [Gardnerella vaginalis AMD] gi|296888807|gb|EFH27544.1| cytidine and deoxycytidylate deaminase [Gardnerella vaginalis AMD] Length = 153 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/154 (34%), Positives = 81/154 (52%), Gaps = 8/154 (5%) Query: 1 MKKGNVF-MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEIL 57 M+ VF M+ AL A+ +A E+PVGAV VL+ II + N + D AHAE+L Sbjct: 3 MRDEIVFAMNQALNLARESASAGEVPVGAV-VLDGGGNIIGKGANMREQSADPLAHAEVL 61 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 A++ L + L VTLEPC MCA A+ R++R+ +GA + K G G+ + Sbjct: 62 AMKDAAISRKSWNLSDCTLVVTLEPCPMCAGAVLQTRLKRVIFGAWDAKLGAC--GSVWD 119 Query: 118 TLATCH--HSPEIYPGISEQRSRQIIQDFFKERR 149 L H PE+ + E +++++FF +R Sbjct: 120 ILRDPHVGSRPEVIGSVCESECARLLRNFFAHQR 153 >gi|326499113|dbj|BAK06047.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 186 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 1/109 (0%) Query: 3 KGNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K + F+S A+EEA A + P GAV V N+++++ N + D TAHAE+ AIR Sbjct: 30 KEHKFLSIAVEEAYRAVDCGHGRPFGAVVVRNDQVVASCHNMVLKNTDPTAHAEVTAIRE 89 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 CR L + L + ++Y + EP MC A+ L+RI+RL YGA GI Sbjct: 90 ACRKLGKIDLSDCEMYASCEPFPMCFGAVRLSRIKRLVYGAKAEAAVGI 138 >gi|123448020|ref|XP_001312744.1| Cytidine and deoxycytidylate deaminase zinc-binding region family protein [Trichomonas vaginalis G3] gi|121894602|gb|EAX99814.1| Cytidine and deoxycytidylate deaminase zinc-binding region family protein [Trichomonas vaginalis G3] Length = 171 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 9/128 (7%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM--GCR 64 +M AL+ A +A E+ VG V + N ++I+ GN+ D T HAE++ + R Sbjct: 21 YMQLALKAADDAFDAGEVAVGCVIIHNGQVIASGGNQTNAKNDATRHAELVTFKHLKESR 80 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 ++IL E LYVT EPC MCA+AI + I R+ YG N + GG Y + H Sbjct: 81 SDYKQILKESTLYVTCEPCIMCASAIKMMGIPRVVYGCLNDRFGGC---GSVYNI----H 133 Query: 125 SPEIYPGI 132 + EI P + Sbjct: 134 THEIMPSL 141 >gi|283783769|ref|YP_003374523.1| cytidine and deoxycytidylate deaminase zinc-binding region [Gardnerella vaginalis 409-05] gi|283442021|gb|ADB14487.1| cytidine and deoxycytidylate deaminase zinc-binding region [Gardnerella vaginalis 409-05] Length = 153 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 6/153 (3%) Query: 1 MKKGNVF-MSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILA 58 M+ VF M+ AL A+ +A E+PVGAV + + II + N + D AHAE+LA Sbjct: 3 MRDEIVFAMNQALNLARESASAGEVPVGAVVLDGSGNIIGKGANMREQSADPLAHAEVLA 62 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 ++ L + L VTLEPC MCA A+ R++R+ +GA + K G G+ + Sbjct: 63 MKDAATSRKSWNLSDCTLVVTLEPCPMCAGAVLQTRLKRVIFGAWDAKLGAC--GSVWDI 120 Query: 119 LATCH--HSPEIYPGISEQRSRQIIQDFFKERR 149 L H PE+ + E Q ++ FF +R Sbjct: 121 LRDPHVGSRPEVIGSVCEPECAQPLRTFFAHQR 153 >gi|258650784|ref|YP_003199940.1| CMP/dCMP deaminase zinc-binding [Nakamurella multipartita DSM 44233] gi|258554009|gb|ACV76951.1| CMP/dCMP deaminase zinc-binding [Nakamurella multipartita DSM 44233] Length = 159 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/140 (35%), Positives = 71/140 (50%), Gaps = 1/140 (0%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 AL A+ A ++P+GA+ + + +I R N D TAHAEILA+R Q Sbjct: 16 ALNLARRAPDTGDLPIGALVLDPDGVVIGRGRNAREATGDPTAHAEILALRQAAAARGQW 75 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 L L VT+EPCTMCA A+ LARI + +G PK G + H ++ Sbjct: 76 NLTGCTLAVTVEPCTMCAGAVVLARIETVVFGCWEPKTGAAGSLWDVLRDRRLTHRVQVR 135 Query: 130 PGISEQRSRQIIQDFFKERR 149 G+ EQ S Q+++ FF + R Sbjct: 136 GGVLEQESAQLLRTFFADHR 155 >gi|195056037|ref|XP_001994919.1| GH13454 [Drosophila grimshawi] gi|193892682|gb|EDV91548.1| GH13454 [Drosophila grimshawi] Length = 160 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/146 (29%), Positives = 76/146 (52%), Gaps = 9/146 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC--- 63 FM AL EA+ A E+PVG V + ++K+I+R GN ++ T HAE + I Sbjct: 4 FMEEALVEARRARDAGEVPVGCVFIHDDKVIARGGNEVNVHRNATRHAEFICIDATLAYC 63 Query: 64 ---RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R+ ++++ E+ + VT+EPC MC+AA+ ++ + YG N + GG + A Sbjct: 64 REKRLPARQVFSEISVVVTVEPCIMCSAALHTLAVKEIIYGCENDRFGG---KSVIDVAA 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 I G+ + + ++++F+K Sbjct: 121 VVGQRINITGGVRAEEAMTLLKEFYK 146 >gi|118404850|ref|NP_001072562.1| tRNA-specific adenosine deaminase 2 [Xenopus (Silurana) tropicalis] gi|123905851|sp|Q0P4H0|ADAT2_XENTR RecName: Full=tRNA-specific adenosine deaminase 2; AltName: Full=Deaminase domain-containing protein 1; AltName: Full=tRNA-specific adenosine-34 deaminase subunit ADAT2 gi|112419108|gb|AAI22085.1| deaminase domain containing 1 [Xenopus (Silurana) tropicalis] Length = 170 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 34/162 (20%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A + AQ+A E+PVG + V +N+++ + N E K+ T HAE++AI ++L Sbjct: 8 WMHKAFQMAQDALNNGEVPVGCLMVYDNQVVGKGRNEVNETKNATRHAEMVAID---QVL 64 Query: 67 ---------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI------- 110 S+++ + LYVT+EPC MCA A+ L +I + YG N + GG Sbjct: 65 DWCEKNSKKSRDVFENIVLYVTVEPCIMCAGALRLLKIPLVVYGCRNERFGGCGSVLNVA 124 Query: 111 -----ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + GT+F + G +++ ++++ F+K+ Sbjct: 125 GDNIPDTGTEFKYIG----------GYQAEKAVELLKTFYKQ 156 >gi|296199377|ref|XP_002747141.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Callithrix jacchus] Length = 191 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 14/152 (9%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI ++L Sbjct: 25 WMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAID---QVL 81 Query: 67 ---------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 S E+ LYVT+EPC MCAAA+ L +I + YG N + GG + Sbjct: 82 DWCGRSGKNSSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIA 141 Query: 118 T--LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + L + PG + + ++++ F+K+ Sbjct: 142 SADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173 >gi|294790273|ref|ZP_06755431.1| tRNA-specific adenosine deaminase [Scardovia inopinata F0304] gi|294458170|gb|EFG26523.1| tRNA-specific adenosine deaminase [Scardovia inopinata F0304] Length = 185 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL+ A AA ++PVGAV + N ++IS+ N+ + D +HAEI A+R ++ Sbjct: 39 MALALKNAVRAAQAGDVPVGAVLLDNRGRLISQGYNQRQARADPLSHAEIEALRAAGQVK 98 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VT+EPC MCA A + R+ +G +PK G + P Sbjct: 99 GDWNLAGCSLIVTMEPCPMCAGAAVSVHLGRIVFGTWDPKMGACGSVWDIPRDPHVGSQP 158 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI Q +++ FF++ R Sbjct: 159 EVVGGILRQDCSRLLSHFFQKTR 181 >gi|242219384|ref|XP_002475472.1| predicted protein [Postia placenta Mad-698-R] gi|220725331|gb|EED79323.1| predicted protein [Postia placenta Mad-698-R] Length = 175 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 6/109 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAE------ILAIR 60 +M A++ A+ A E+PVG + V + ++I++A NR +L++ T HAE ILA + Sbjct: 10 WMRQAMQMAEIALAHGEVPVGCIFVRDGRVIAQARNRTNKLRNATRHAELEAIDEILADK 69 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 L+ L E LYVT+EPC MCA+A+ I+ ++YG N + GG Sbjct: 70 QWTPALTPYPLSETTLYVTVEPCIMCASALRQLGIKEVFYGCENDRFGG 118 >gi|299115717|emb|CBN74282.1| tRNA specific adenosine deaminase [Ectocarpus siliculosus] Length = 186 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 5/145 (3%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 V+M AL+EA+ A + E+PVG V V +IIS N E + T HAE++AI Sbjct: 16 VYMRLALKEAEMALSKGEVPVGCVVVHKPTARIISCGHNETSEAFNATRHAELVAIDGIL 75 Query: 64 RILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY--TLA 120 R + +L E DL+VT EPC MCAAA+ +I+ + +G SN + GG + + +L Sbjct: 76 RAQTDLSLLRECDLFVTCEPCIMCAAALRDVKIKTVVFGCSNDRFGGCGSVLSVHDGSLP 135 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 H+ + G+ + + + F+ Sbjct: 136 ISGHTYPCHSGLLADEAIALFKQFY 160 >gi|62389126|ref|YP_224528.1| cytosine deaminase [Corynebacterium glutamicum ATCC 13032] gi|41324459|emb|CAF18799.1| PUTATIVE CYTOSINE DEAMINASE [Corynebacterium glutamicum ATCC 13032] Length = 143 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 2/130 (1%) Query: 22 NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79 ++PVGAV +I++ A NR +D TAHAEI+A+R R S L + VT Sbjct: 14 GDVPVGAVIYAPTGEILATATNRREADRDPTAHAEIIALRRAARRFSDGWRLSDCTAVVT 73 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC+MCA A+ ARI R+ +GA P+ G + H E+ GI E Sbjct: 74 LEPCSMCAGALVGARIGRIVFGAFEPRTGACGSVFDVVRDPAVLHKVEVSGGILEPECAA 133 Query: 140 IIQDFFKERR 149 ++ +FF+ R Sbjct: 134 LMTEFFELHR 143 >gi|299770668|ref|YP_003732694.1| guanine deaminase (Guanase) (guanine aminase) (guanine aminohydrolase) (GAH) (GDEase) [Acinetobacter sp. DR1] gi|298700756|gb|ADI91321.1| guanine deaminase (Guanase) (guanine aminase) (guanine aminohydrolase) (GAH) (GDEase) [Acinetobacter sp. DR1] Length = 160 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 6/116 (5%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+KG F+ A+E A N + P GAV V N ++I+ N+ D TAHAE+LAIR Sbjct: 1 MEKGEQFLRNAIELAYNNIEKGGRPFGAVVVKNGEVIASGVNQILTTNDPTAHAELLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 +IL L +Y + PC MC AA+ LA I+ + Y SN E+GT F Sbjct: 61 AASQILGSANLEGCSVYASGHPCPMCMAAMRLAGIKSVSYAYSN------EDGTPF 110 >gi|255630329|gb|ACU15521.1| unknown [Glycine max] Length = 186 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/125 (38%), Positives = 65/125 (52%), Gaps = 10/125 (8%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A+EEA + ++ P G V V N++I++ N D TAHAE+ AIR C+ Sbjct: 34 FLRKAVEEAYKGVDCKDGGPFGVVIVHNDEIVASCHNMVLCNTDPTAHAEVTAIREACKK 93 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE---------NGTQF 116 L Q L + ++Y + EPC MC AI L+RI+RL YGA I GT F Sbjct: 94 LKQIELADCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGF 153 Query: 117 YTLAT 121 Y AT Sbjct: 154 YQKAT 158 >gi|19551479|ref|NP_599481.1| cytosine/adenosine deaminase [Corynebacterium glutamicum ATCC 13032] gi|145294347|ref|YP_001137168.1| hypothetical protein cgR_0302 [Corynebacterium glutamicum R] gi|140844267|dbj|BAF53266.1| hypothetical protein [Corynebacterium glutamicum R] Length = 159 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 2/130 (1%) Query: 22 NEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79 ++PVGAV +I++ A NR +D TAHAEI+A+R R S L + VT Sbjct: 30 GDVPVGAVIYAPTGEILATATNRREADRDPTAHAEIIALRRAARRFSDGWRLSDCTAVVT 89 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC+MCA A+ ARI R+ +GA P+ G + H E+ GI E Sbjct: 90 LEPCSMCAGALVGARIGRIVFGAFEPRTGACGSVFDVVRDPAVLHKVEVSGGILEPECAA 149 Query: 140 IIQDFFKERR 149 ++ +FF+ R Sbjct: 150 LMTEFFELHR 159 >gi|291397092|ref|XP_002714901.1| PREDICTED: deaminase domain containing 1-like [Oryctolagus cuniculus] Length = 192 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 8/149 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63 +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI C Sbjct: 26 WMEEAMRMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWC 85 Query: 64 R---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118 R S E+ LYVT+EPC MCAAA+ L +I + YG N + GG + + Sbjct: 86 RRSGKSSAEVFEHTVLYVTVEPCIMCAAALRLLKIPLVVYGCQNERFGGCGSVLNIASAD 145 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 146 LPNTGRPFQCLPGYRAEEAVEMLKTFYKQ 174 >gi|257067545|ref|YP_003153800.1| tRNA-adenosine deaminase [Brachybacterium faecium DSM 4810] gi|256558363|gb|ACU84210.1| tRNA-adenosine deaminase [Brachybacterium faecium DSM 4810] Length = 162 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/119 (40%), Positives = 65/119 (54%), Gaps = 1/119 (0%) Query: 24 IPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 +P+GAV V + +++ AGNR +D TAHAEILA+R + L L VTLEP Sbjct: 34 VPIGAVVVAPDGAVLATAGNRREADEDPTAHAEILALRRAAAATGRWNLTGCTLVVTLEP 93 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 CTMCA AI LARIRR+ GA +PK G + +H E+ G+ Q ++ Sbjct: 94 CTMCAGAIVLARIRRVVVGAMDPKAGAAGSLYDLVREPRLNHRVELVTGVRGQECGDLL 152 >gi|168007071|ref|XP_001756232.1| predicted protein [Physcomitrella patens subsp. patens] gi|162692742|gb|EDQ79098.1| predicted protein [Physcomitrella patens subsp. patens] Length = 185 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+S A+EEA + + P GAV V +++II R N + D TAHAE+ A+R C+ Sbjct: 33 FLSKAVEEAYEGVRCGDGGPFGAVVVKDDQIIVRCHNMVLKNMDPTAHAEVTAVREACKK 92 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L + L + ++Y + EPC MC AI L++++RL YGA Sbjct: 93 LERYDLSDCEIYASCEPCPMCFGAIHLSKMKRLVYGA 129 >gi|33240486|ref|NP_875428.1| cytosine/adenosine deaminase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238014|gb|AAQ00081.1| Cytosine/adenosine deaminase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 164 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 3/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M + A+ E+P+ A+ +LN K I N + D HAE++A+R Sbjct: 17 WMMILRKRAKIVGKEGEVPITAI-ILNEKGHCIGHGRNTRNKRFDPMGHAELVALRQAAW 75 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + E L VTLEPC MCA A+ AR+ R+ +GA + K GG+ T + HH Sbjct: 76 LKGDWRFNECTLIVTLEPCQMCAGALIQARMGRVIFGAYDFKRGGLGGTLDLSTHKSAHH 135 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + G+ ++ +Q I+++F RR Sbjct: 136 KMIVKGGVMKKEIKQEIEEWFSLRR 160 >gi|88855909|ref|ZP_01130571.1| cytosine/adenosine deaminase [marine actinobacterium PHSC20C1] gi|88814776|gb|EAR24636.1| cytosine/adenosine deaminase [marine actinobacterium PHSC20C1] Length = 155 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/150 (36%), Positives = 76/150 (50%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAI 59 + K + +M+ A+ EA+ A ++PV A+ N + G REL D TAHAE++AI Sbjct: 6 VTKFDQWMTRAVAEAKLTADSADVPVAALVFDENDNLVSIGRNERELTGDPTAHAEVVAI 65 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R L + L VTLEPCTMCA AI ARI R+ +GA + K G + Sbjct: 66 RAAAAATGSWRLDTMTLVVTLEPCTMCAGAILQARIPRVVFGAWDEKAGAAGSVNDLLRD 125 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI E ++ +FF+ RR Sbjct: 126 RRLPHKVEVVAGIQEAECAALLTEFFEARR 155 >gi|311065133|ref|YP_003971859.1| cytosine/adenosine deaminase [Bifidobacterium bifidum PRL2010] gi|310867453|gb|ADP36822.1| Cytosine/adenosine deaminase [Bifidobacterium bifidum PRL2010] Length = 150 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ + A + ++PVGAV VL+ + +I R NR E D AHAEI A+R + Sbjct: 8 MCEAIALGERAGKQGDVPVGAV-VLDERGTVIGRGRNRREEGHDPLAHAEIEAMREAAQA 66 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L VTLEPC MCA A I R+ +GA + K G + H Sbjct: 67 RGDWNLADCTLVVTLEPCPMCAGACIQTHIGRIVFGAWDAKLGACGSIWDIPRDPHVGHV 126 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P++ G+ E +++ FF RR Sbjct: 127 PQVVGGVREAACARLLTGFFASRR 150 >gi|297679305|ref|XP_002817478.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Pongo abelii] Length = 191 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 8/150 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 25 WMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWC 84 Query: 67 SQ------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118 Q E+ LYVT+EPC MCAAA+ L +I + YG N + GG + + Sbjct: 85 LQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 144 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148 L + PG + + ++++ F+K+ Sbjct: 145 LPNTGRPFQCIPGYRAEEAVEMLKTFYKQE 174 >gi|332707396|ref|ZP_08427446.1| cytosine/adenosine deaminase [Lyngbya majuscula 3L] gi|332353887|gb|EGJ33377.1| cytosine/adenosine deaminase [Lyngbya majuscula 3L] Length = 150 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 52/92 (56%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + +II++A N+ D TAHAEI+AIR C++L L +LY + EPC Sbjct: 19 PFGAVVVKDGEIIAKAHNQVTSTNDPTAHAEIVAIRDACKVLQTFQLTGCELYTSCEPCP 78 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC AI AR+ ++YY + I +F Sbjct: 79 MCLGAIYWARLDKVYYANTKADAAQIGFDDKF 110 >gi|320095329|ref|ZP_08027018.1| tRNA-specific adenosine deaminase [Actinomyces sp. oral taxon 178 str. F0338] gi|319977741|gb|EFW09395.1| tRNA-specific adenosine deaminase [Actinomyces sp. oral taxon 178 str. F0338] Length = 443 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A A ++PVGAV VL+ +++ + N + +D HAEI+A+R R Sbjct: 11 MGKALYLADRARETGDVPVGAV-VLDTLGRVVGKGWNCREKDRDPAGHAEIVALRDAART 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L L V+LEPCTMCA AI AR+ R+ +GA +PK G + + +H Sbjct: 70 LKRWNLVGCTLVVSLEPCTMCAGAIVSARVDRVVFGAWDPKAGAAGSVRDVLRDSRLNHQ 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + ++ FF +R Sbjct: 130 VEVVGGVLGHEAAMQLRSFFAGKR 153 >gi|310288270|ref|YP_003939529.1| tRNA-specific adenosine deaminase [Bifidobacterium bifidum S17] gi|309252207|gb|ADO53955.1| tRNA-specific adenosine deaminase [Bifidobacterium bifidum S17] Length = 150 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ + A + ++PVGAV VL+ + +I R NR D AHAEI A+R + Sbjct: 8 MCEAIALGERAGKQGDVPVGAV-VLDERGTVIGRGRNRREAGHDPLAHAEIEAMREAAQA 66 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L VTLEPC MCA A RI R+ +GA + K G + H Sbjct: 67 RGDWNLADCTLVVTLEPCPMCAGACIQTRIGRIVFGAWDAKLGACGSIWDIPRDPHVGHV 126 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P++ G+ E +++ FF RR Sbjct: 127 PQVVGGVREAACARLLTGFFASRR 150 >gi|159903565|ref|YP_001550909.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9211] gi|159888741|gb|ABX08955.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9211] Length = 165 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 3/145 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M L A +E+PV A+ +L+NK I N +D HAE++A+R Sbjct: 17 WMRRLLNRANELGKEDEVPVIAM-ILDNKGHCIGHGRNTRNTERDPLGHAELVALRQAKW 75 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + + VTLEPC MCA A+ AR+ ++ +GA + K GG+ + HH Sbjct: 76 LKKDWRFNDCTIIVTLEPCQMCAGALIQARMGKVIFGAPDTKRGGLGGSIDLSIHKSAHH 135 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + ++++I+ +F +RR Sbjct: 136 KMIVHGGVMKYEAQELIRKWFSQRR 160 >gi|194033488|ref|XP_001924271.1| PREDICTED: tRNA-specific adenosine deaminase 2 isoform 1 [Sus scrofa] Length = 191 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 14/152 (9%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A++ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI ++L Sbjct: 25 WMEQAMQMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAID---QVL 81 Query: 67 S---------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 E+ LYVT+EPC MCAAA+ L +I + YG N + GG + Sbjct: 82 DWCHRGGKSPSEVFERTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLDIA 141 Query: 118 T--LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + L + PG + + ++++ F+K+ Sbjct: 142 SADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173 >gi|325121723|gb|ADY81246.1| guanine deaminase (Guanase) [Acinetobacter calcoaceticus PHEA-2] Length = 145 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 51/138 (36%), Positives = 71/138 (51%), Gaps = 7/138 (5%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+KG F+ A+E A N + P GAV V N +II+ N+ D TAHAE+LAIR Sbjct: 1 MEKGEQFLRKAIELAYNNIEKGGRPFGAVVVKNGEIIASGVNQILVTNDPTAHAELLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L +Y + PC MC AA+ LA I+ + Y SN E+GT F L+ Sbjct: 61 AASQVLGSANLEGCSVYASGHPCPMCMAAMRLAGIKSVSYAYSN------EDGTPF-GLS 113 Query: 121 TCHHSPEIYPGISEQRSR 138 T E+ +EQ + Sbjct: 114 TAEIYIELAKPFAEQSMK 131 >gi|311030254|ref|ZP_07708344.1| hypothetical protein Bm3-1_06896 [Bacillus sp. m3-13] Length = 158 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 43/116 (37%), Positives = 55/116 (47%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M F+ A++ A N P GAV NN+II+ NR D TAHAE++AIR Sbjct: 3 MHLHEFFLHRAIDLALQNVQENGGPFGAVITKNNQIIAEGVNRVTSNHDPTAHAEVMAIR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 C L L + LY + EPC MC AI ARI +Y+ A I +F Sbjct: 63 KACHSLQTFELRDCILYSSCEPCPMCLGAIYWARIPTVYFAADRKDAASIHFDDEF 118 >gi|67481305|ref|XP_656002.1| cytidine/deoxycytidylate deaminase family protein [Entamoeba histolytica HM-1:IMSS] gi|56473174|gb|EAL50617.1| cytidine/deoxycytidylate deaminase family protein [Entamoeba histolytica HM-1:IMSS] Length = 166 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 66/112 (58%), Gaps = 7/112 (6%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILA 58 M+ +M+ AL+ Q A E+PVG V V+N+K I+++ N +E +D T HAEI+ Sbjct: 1 MQDDKYYMNEALKMGQEALNIGEVPVGCV-VINSKGEIVAKGRNHTKEFQDGTQHAEIVC 59 Query: 59 IRMGCRILSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 I +++ + + L E LYVT EPC MCA A+ I ++ YG SN + GG Sbjct: 60 IN---QLVEKHVHLSECILYVTCEPCIMCAEALKQCGITKIIYGCSNARFGG 108 >gi|297813065|ref|XP_002874416.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis lyrata subsp. lyrata] gi|297320253|gb|EFH50675.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis lyrata subsp. lyrata] Length = 185 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F++ A+EEA + + P GAV V +++++ N + D TAHAE+ AIR C+ Sbjct: 33 FLTQAVEEAYKGVDCGDGGPFGAVIVHKDEVVASCHNMVLKYTDPTAHAEVTAIREACKK 92 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L++ L E ++Y + EPC MC AI L+R++RL YGA Sbjct: 93 LNKIELSECEIYASCEPCPMCFGAIHLSRLKRLVYGA 129 >gi|114778043|ref|ZP_01452943.1| cytidine/deoxycytidylate deaminase family protein [Mariprofundus ferrooxydans PV-1] gi|114551649|gb|EAU54202.1| cytidine/deoxycytidylate deaminase family protein [Mariprofundus ferrooxydans PV-1] Length = 157 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/120 (38%), Positives = 64/120 (53%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGA+ VL + N L D +AHAE+ A+R C + L + LYVTLEP Sbjct: 23 EVPVGALVVLPDGREFAGHNAPITLHDPSAHAEMRAMRAACAAVGNYRLNDATLYVTLEP 82 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 CTMCA AI ARI R+ YGA +PK G + + Q +H P + G+ +++ Sbjct: 83 CTMCAGAIVHARIGRVVYGADDPKTGAVTSLYQILADHRLNHQPTVTSGVMADECSALLK 142 >gi|218441962|ref|YP_002380291.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424] gi|218174690|gb|ACK73423.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424] Length = 158 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 36/79 (45%), Positives = 48/79 (60%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V KII++ N+ D TAHAE++AIR C++L L +LY + EPC Sbjct: 27 PFGAVIVKEGKIIAKGYNQVISSNDPTAHAEVVAIRHACQVLQNFDLKGCELYTSCEPCP 86 Query: 85 MCAAAISLARIRRLYYGAS 103 MC AI AR+ ++YYG S Sbjct: 87 MCLGAIYWARLDKIYYGNS 105 >gi|262276493|ref|ZP_06054302.1| tRNA-specific adenosine-34 deaminase [Grimontia hollisae CIP 101886] gi|262220301|gb|EEY71617.1| tRNA-specific adenosine-34 deaminase [Grimontia hollisae CIP 101886] Length = 174 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 38/101 (37%), Positives = 58/101 (57%) Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 D TAHAE++A+R + L L E LYVTLEPC MCA+A+ +RI ++ +GA + K G Sbjct: 52 DATAHAEMMALRQAGKKLQNYRLLEAVLYVTLEPCPMCASAMVHSRIGKVVFGAPDYKTG 111 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + +H + G+ E+ R+ +Q FF+ RR Sbjct: 112 AAGSVMNLLSYDGVNHHVQFQGGVLEEECREQLQAFFRRRR 152 >gi|326492115|dbj|BAJ98282.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 186 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+S A+EEA + + P GAV V N+++I N D TAHAE+ AIR C+ Sbjct: 34 FLSKAVEEAYKGVDCGHGGPFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKK 93 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L + L + ++Y + EPC MC A+ L+RI+RL YGA Sbjct: 94 LGKIELSDCEMYASCEPCPMCFGAVHLSRIKRLVYGA 130 >gi|300933920|ref|ZP_07149176.1| putative cytosine/adenosine deaminase [Corynebacterium resistens DSM 45100] Length = 173 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 4/147 (2%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ALE A A R ++PVGAV + + ++ N+ + D HAEI AIR Sbjct: 29 EAWMRRALEVA-GATPRGDVPVGAVVYGPDGRELAVGFNQREKDSDPLGHAEIAAIRAAV 87 Query: 64 RILSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L + L VTLEPC MCA A AR++R+ YGA PK G + A Sbjct: 88 AELGDAWRLEDCTLVVTLEPCAMCAGAALGARVKRIVYGAREPKTGACGSVWDLPREAPL 147 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + E++ G+ ++++FF++ R Sbjct: 148 HKA-EVFGGVLRDECEALVKEFFEQLR 173 >gi|116621653|ref|YP_823809.1| guanine deaminase [Candidatus Solibacter usitatus Ellin6076] gi|116224815|gb|ABJ83524.1| Guanine deaminase [Candidatus Solibacter usitatus Ellin6076] Length = 154 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/96 (41%), Positives = 51/96 (53%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM A+E A R P A+ V + +I+ N+ D TAHAEI+AIR CR Sbjct: 3 NTFMQQAIEMAVANVRRGGGPFAALVVKDGIVIASGANQVTRSNDPTAHAEIVAIREACR 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 +L LP ++Y T EPC MC AI AR +YY Sbjct: 63 VLGDFQLPGCEIYTTCEPCPMCLGAIYWARPAAVYY 98 >gi|228953373|ref|ZP_04115419.1| Cytosine deaminase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229080221|ref|ZP_04212748.1| Cytosine deaminase [Bacillus cereus Rock4-2] gi|229191139|ref|ZP_04318128.1| Cytosine deaminase [Bacillus cereus ATCC 10876] gi|228592289|gb|EEK50119.1| Cytosine deaminase [Bacillus cereus ATCC 10876] gi|228703116|gb|EEL55575.1| Cytosine deaminase [Bacillus cereus Rock4-2] gi|228806270|gb|EEM52843.1| Cytosine deaminase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 158 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 47/102 (46%), Positives = 60/102 (58%), Gaps = 3/102 (2%) Query: 11 ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR-MGCRILSQ 68 ALEEA+ A N PVGAV V NN +I+R NR KD+TAHAEI AIR G + Sbjct: 2 ALEEAEKALKENTYPVGAVIVDGNNNVIARGRNRVHPQKDITAHAEIDAIRNAGEAMFDA 61 Query: 69 EILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 +I E +Y TLEPC MC I A+I+R+ + ++ G G Sbjct: 62 KIKNEKFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFG 103 >gi|148271718|ref|YP_001221279.1| putative cytosine/adenosine deaminase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829648|emb|CAN00564.1| putative cytosine/adenosine deaminase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 149 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL+EA+ A ++PVGAV V + + I R N +D TAHAE+ A+R + Sbjct: 1 MAVALDEARACAATGDVPVGAVVVDADGVVIGRGRNLREARQDPTAHAEVEALREAAAVT 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPC MCA AI AR+ R+ +GA + K G + H Sbjct: 61 GDRHLVGTTLVVTLEPCVMCAGAILAARVPRVVFGAWDEKAGAAGSLYDVLRDRRLPHRA 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E++ G++ + ++ FF RR Sbjct: 121 EVFAGVAAEECAALLDGFFAGRR 143 >gi|255542370|ref|XP_002512248.1| Guanine deaminase, putative [Ricinus communis] gi|223548209|gb|EEF49700.1| Guanine deaminase, putative [Ricinus communis] Length = 211 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F++ A+EEA + + P GAV V N++I+ N + D TAHAE+ A+R C+ Sbjct: 59 FLTRAVEEAYKGVECGDGGPFGAVVVRNDEIVVSCHNMVLKHTDPTAHAEVTAVREACKK 118 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L + L + ++Y + EPC MC AI L+RI+RL YGA Sbjct: 119 LDRIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 155 >gi|326915810|ref|XP_003204205.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Meleagris gallopavo] Length = 165 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 57/108 (52%), Gaps = 6/108 (5%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M L EAQ A E+PVG + V + + I + N E K+ T HAE++AI Sbjct: 1 MHTKLAEAQEALEAGEVPVGCLLVYDGEAIGKGRNEVNETKNATRHAEMVAIDQVLEWCQ 60 Query: 68 Q------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 Q E+ LYVT+EPC MCAAA+ L +I R+ YG N + GG Sbjct: 61 QHKKAHEEVFSHSVLYVTVEPCIMCAAALRLMKIPRVVYGCRNERFGG 108 >gi|124360458|gb|ABN08468.1| CMP/dCMP deaminase, zinc-binding [Medicago truncatula] Length = 178 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 15/120 (12%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ ++FM A+++A+ A E+PVG V V + K+I+ NR E ++ T HAE+ AI + Sbjct: 4 QETHIFMELAIQQAKLAMGALEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAIDV 63 Query: 62 GCRILSQ------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 +L Q + LYVT EPC MCA+A+S I+ ++YG SN K GG Sbjct: 64 ---LLEQWQKNGLSMTEVAKKFSNCSLYVTCEPCIMCASALSNLGIKEVFYGCSNDKFGG 120 >gi|300113843|ref|YP_003760418.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii C-113] gi|299539780|gb|ADJ28097.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii C-113] Length = 155 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 40/86 (46%), Positives = 48/86 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + +I+ RA N L+D TAHAE+ AIRM CR L+ L LY + EPC Sbjct: 24 PFGAVVVRDGEILGRACNDVIALRDPTAHAEVQAIRMACRNLNDFHLEGCTLYCSCEPCP 83 Query: 85 MCAAAISLARIRRLYYGASNPKGGGI 110 MC A ARI R+YY A I Sbjct: 84 MCLGAAYWARIARIYYAAGQEDAAHI 109 >gi|323358758|ref|YP_004225154.1| cytosine/adenosine deaminase [Microbacterium testaceum StLB037] gi|323275129|dbj|BAJ75274.1| cytosine/adenosine deaminase [Microbacterium testaceum StLB037] Length = 183 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 64/129 (49%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRE-LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PVGAV V + + G RE D TAHAE++A+R L L L VTL Sbjct: 52 GDVPVGAVVVDASGTVRGEGRNLREATHDPTAHAEVVALRRAAESLGTWHLAGCTLVVTL 111 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A+ AR+ R+ +GA + K G + H E+ G++E + Sbjct: 112 EPCVMCAGAVLQARVPRVVFGAWDAKAGAAGSMYDVLRDRRLPHRVEVVGGVAEGEASTR 171 Query: 141 IQDFFKERR 149 ++ FF RR Sbjct: 172 LRAFFDVRR 180 >gi|239815773|ref|YP_002944683.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110] gi|239802350|gb|ACS19417.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110] Length = 369 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 68/126 (53%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V N + ++ N D +AHAEI A+R G L L +L+VTLEPC Sbjct: 32 VPVGAVLVRNGQFVASGRNTPVAQHDPSAHAEINALRAGAAALGNYRLDGCELFVTLEPC 91 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA A+ AR+ R+ +GA++PK G + + +H ++ G+ ++Q Sbjct: 92 AMCAGAMLHARLARVVFGAADPKTGAAGSVLDLFAEPRLNHRTQVQGGVLAAECSALLQG 151 Query: 144 FFKERR 149 FF+ RR Sbjct: 152 FFQLRR 157 >gi|319955332|ref|YP_004166599.1| guanine deaminase [Cellulophaga algicola DSM 14237] gi|319423992|gb|ADV51101.1| Guanine deaminase [Cellulophaga algicola DSM 14237] Length = 158 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 51/92 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V +++II+ NR D TAHAE++AIR C+ L+ L + +Y + EPC Sbjct: 27 PFGAVVVKDDEIIAEGYNRVTSTNDPTAHAEVVAIREACKKLNNFELTDCTIYTSCEPCP 86 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC AI R + +Y+G + I+ QF Sbjct: 87 MCLGAIYWTRPKMVYFGCNREDAAAIQFDDQF 118 >gi|89519331|gb|ABD75808.1| putative cytosine/adenosine deaminase [uncultured bacterium] Length = 163 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 1/98 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ AL+EA+ A +R + P+GAV V II+R+ NR L+ AHAE AI C Sbjct: 13 YMAEALKEAELAGIRGDKPIGAVIVHGGNIIARSSNRFHTLQSPVAHAETTAI-FACAPY 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 ++ E LY T+EPC MC I +A IR + +G + Sbjct: 72 LEQYKGECTLYTTVEPCVMCLGTIVIAGIRHIVFGVKD 109 >gi|323507722|emb|CBQ67593.1| related to TAD2-tRNA-specific adenosine deaminase 2 [Sporisorium reilianum] Length = 1276 Score = 74.3 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 49/124 (39%), Positives = 64/124 (51%), Gaps = 18/124 (14%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL AQ A NE+PVG V V ++I+R NR EL + T HAE+ AI I+ Sbjct: 945 WMREALAMAQEALEANEVPVGGVFVRKGQVIARGRNRTNELLNATRHAELEAIDHILSIM 1004 Query: 67 ---------SQEILPEVD-------LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 + PE D LYVT+EPC MC AA+ I R+ +GA N + GG Sbjct: 1005 PPSAPDFAVAPHSGPEGDNPFKDTTLYVTIEPCIMCGAALRQIGIGRVVFGAGNERFGG- 1063 Query: 111 ENGT 114 NG+ Sbjct: 1064 -NGS 1066 >gi|228921710|ref|ZP_04085027.1| Cytosine deaminase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228837922|gb|EEM83246.1| Cytosine deaminase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 158 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 47/102 (46%), Positives = 60/102 (58%), Gaps = 3/102 (2%) Query: 11 ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR-MGCRILSQ 68 ALEEA+ A N PVGAV V NN +I+R NR KD+TAHAEI AIR G + Sbjct: 2 ALEEAEKALKENTYPVGAVIVDGNNNVIARGRNRVHPQKDITAHAEIDAIRNAGEAMFDA 61 Query: 69 EILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 +I E +Y TLEPC MC I A+I+R+ + ++ G G Sbjct: 62 KIKNEKFTIYSTLEPCPMCTDGILFAKIQRVVWLLNDDLGFG 103 >gi|94985096|ref|YP_604460.1| tRNA(Ile)-lysidine synthetase-like protein [Deinococcus geothermalis DSM 11300] gi|94555377|gb|ABF45291.1| tRNA(Ile)-lysidine synthetase-like protein and cytosine deaminase [Deinococcus geothermalis DSM 11300] Length = 539 Score = 73.9 bits (180), Expect = 6e-12, Method: Composition-based stats. Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 2/128 (1%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV + + +I R N +RE D+T HAE+ A+R L L + L VTLE Sbjct: 404 EVPVGAVVLGPDGAVIGRGRNTSREHGDMTRHAELAALREAAHSLGTPYLTDCTLVVTLE 463 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC AI AR+ R+ YGA NPK G + T T A H P + G+ + +++ Sbjct: 464 PCPMCLGAILEARVGRVVYGAPNPKAGALGGVTDLLT-AHWGHRPAVTGGLRAGEAARLL 522 Query: 142 QDFFKERR 149 ++ F+ R Sbjct: 523 RETFRGLR 530 >gi|227495664|ref|ZP_03925980.1| deaminase [Actinomyces coleocanis DSM 15436] gi|226830896|gb|EEH63279.1| deaminase [Actinomyces coleocanis DSM 15436] Length = 191 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 1/145 (0%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCR 64 VFM A+ A A ++PVGA+ V + G RE D HAE+ +R Sbjct: 47 VFMRQAMNLAAEAERAGDVPVGALLVSEGGEVIATGFNTREAACDPCGHAEVNVLRAAAA 106 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L P L VTLEPC MCA AI AR+ R+ +GA + G + +H Sbjct: 107 KLGTWRFPSYTLVVTLEPCVMCAGAIVSARVGRVVFGAWDRAAGACGSLRDVVRDPRVNH 166 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E++ G+ E+ + +FF+ +R Sbjct: 167 QVEVFSGVLEKECETQLLEFFQAKR 191 >gi|255628537|gb|ACU14613.1| unknown [Glycine max] Length = 182 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 15/115 (13%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+++A+ A E+PVG V + K+I+ NR E ++ T HAE+ AI + +L Sbjct: 9 FMELAIQQARLALDVLEVPVGCVIAEDGKVIASGRNRTTETRNATRHAEMEAIDV---LL 65 Query: 67 SQ------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 Q E LYVT EPC MCA+A+S+ I+ ++YG SN K GG Sbjct: 66 GQWQKHGLSMSEVAEKFSNCSLYVTCEPCIMCASALSILGIKEVFYGCSNDKFGG 120 >gi|167540179|ref|XP_001741595.1| tRNA-specific adenosine deaminase [Entamoeba dispar SAW760] gi|165893805|gb|EDR21932.1| tRNA-specific adenosine deaminase, putative [Entamoeba dispar SAW760] Length = 166 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 7/112 (6%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILA 58 M+ +M+ AL+ Q A E+PVG V V+N+K I+++ N +E +D T HAEI+ Sbjct: 1 MQDDKYYMNEALKMGQEALNIGEVPVGCV-VINSKGEIVAKGRNHTKEFQDGTQHAEIVC 59 Query: 59 IRMGCRILSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 I +++ + I L E LYVT EPC MCA A+ I ++ YG SN + GG Sbjct: 60 IN---QLVEKHIRLNECILYVTCEPCIMCAEALKQCGITKIIYGCSNARFGG 108 >gi|126311160|ref|XP_001380965.1| PREDICTED: similar to DEADC1 protein [Monodelphis domestica] Length = 182 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 8/143 (5%) Query: 14 EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GCRILSQ-- 68 +A+ A E+PVG + V NNK++++ N + K+ T HAE++AI C + Sbjct: 23 QAKEALENGEVPVGCLMVYNNKVLAKGRNEVNQTKNATRHAEMVAIDQVLEWCHRYGKSP 82 Query: 69 -EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT--LATCHHS 125 E+ LYVT+EPC MCAAA+ L +I + YG N + GG + + L Sbjct: 83 TEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLDIASADLPNTGTP 142 Query: 126 PEIYPGISEQRSRQIIQDFFKER 148 + PG + + ++++ F+K+ Sbjct: 143 FQCIPGYQAEEAVEMLKTFYKQE 165 >gi|327394833|dbj|BAK12255.1| tRNA-specific adenosine deaminase TadA [Pantoea ananatis AJ13355] Length = 98 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 39/82 (47%), Positives = 49/82 (59%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL AQ A + E+PVGAV V +++I NR D TAHAEI+A+R G ++L Sbjct: 16 WMRRALTLAQRAWEQGEVPVGAVLVQGDRVIGEGWNRPIGQHDPTAHAEIMALRQGGKVL 75 Query: 67 SQEILPEVDLYVTLEPCTMCAA 88 L LYVTLEPC MCA Sbjct: 76 ENYRLLNTTLYVTLEPCIMCAG 97 >gi|255530772|ref|YP_003091144.1| zinc-binding CMP/dCMP deaminase [Pedobacter heparinus DSM 2366] gi|255343756|gb|ACU03082.1| CMP/dCMP deaminase zinc-binding [Pedobacter heparinus DSM 2366] Length = 160 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 50/92 (54%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V N K+I+++ N+ D TAHAE+ AIRM C+ L L +Y + EPC Sbjct: 29 PFGAVIVKNGKVIAKSANKVTSTNDPTAHAEVSAIRMACKKLKTFDLSGCTVYTSCEPCP 88 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC +AI A+I +Y+ + I +F Sbjct: 89 MCLSAIYWAKIDAIYFANTKDDAANIGFSDKF 120 >gi|301753666|ref|XP_002912694.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Ailuropoda melanoleuca] Length = 192 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 8/149 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A++ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 26 WMEEAMQMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQALDWC 85 Query: 67 SQ------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118 + E+ LYVT+EPC MCAAA+ L +I + YG N + GG + + Sbjct: 86 HRSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 145 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 146 LPNTGRPFKCIPGYRAEEAVEMLKTFYKQ 174 >gi|326502722|dbj|BAJ98989.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 169 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 44/101 (43%), Positives = 59/101 (58%), Gaps = 10/101 (9%) Query: 19 ALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI-----LSQEILP 72 AL N E+PVG V V N K+I+ NR ++ T HAE+ AI + + L Q ++ Sbjct: 4 ALDNLEVPVGCVIVENGKVIASGSNRTNATRNATRHAEMEAIDVLLQEWQSIGLDQTLVA 63 Query: 73 E----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 E DLYVT EPC MCA+A+S+ IR +Y+G N K GG Sbjct: 64 EKFAGCDLYVTCEPCIMCASALSILGIREVYFGCPNDKFGG 104 >gi|190689519|gb|ACE86534.1| adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae) protein [synthetic construct] gi|190690877|gb|ACE87213.1| adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae) protein [synthetic construct] Length = 160 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 8/141 (5%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GCRILSQ--- 68 A+ A E+PVG + V NN+++ + N + K+ T HAE++AI CR + Sbjct: 2 AKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPS 61 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT--LATCHHSP 126 E+ LYVT+EPC MCAAA+ L +I + YG N + GG + + L Sbjct: 62 EVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRPF 121 Query: 127 EIYPGISEQRSRQIIQDFFKE 147 + PG + + ++++ F+K+ Sbjct: 122 QCIPGYRAEEAVEMLKTFYKQ 142 >gi|87311104|ref|ZP_01093228.1| putative nucleotide deaminase [Blastopirellula marina DSM 3645] gi|87286195|gb|EAQ78105.1| putative nucleotide deaminase [Blastopirellula marina DSM 3645] Length = 162 Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 57/97 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+E+A+ + P G ++ ++++ + N + D TAHAE+ A+R+ C+ + Sbjct: 12 LMQLAIEKAKQGIAARQSPFGCAIAVDGEVVAVSHNLVLQTVDATAHAEVTALRVACQKV 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + +LP + T EPC MCAAA+ AR+ +YYGA+ Sbjct: 72 GEILLPRAQVATTCEPCPMCAAALHWARVAEIYYGAT 108 >gi|290959146|ref|YP_003490328.1| deaminase [Streptomyces scabiei 87.22] gi|260648672|emb|CBG71785.1| putative deaminase [Streptomyces scabiei 87.22] Length = 183 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 50/160 (31%), Positives = 74/160 (46%), Gaps = 19/160 (11%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEIL-------- 57 M AL EA AA ++PVGAV + + +++ N D TAHAE+L Sbjct: 24 MRLALAEAGRAAEGGDVPVGAVVLSPDGTTVLATGHNEREATGDPTAHAEVLALRRAAAA 83 Query: 58 ---------AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 + G R + L + L VTLEPCTMCA A+ +RI R+ YGA + K G Sbjct: 84 LRATGARGSSAEEGGRRTGEWRLTDCTLVVTLEPCTMCAGALVQSRIDRVVYGARDEKAG 143 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + +H PE+ G+ +++ +FF+ R Sbjct: 144 ATGSLWDVVRDRRLNHRPEVVEGVLADDCARLLTEFFRTR 183 >gi|319901465|ref|YP_004161193.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides helcogenes P 36-108] gi|319416496|gb|ADV43607.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides helcogenes P 36-108] Length = 156 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++ A + R P GAV V + KI+ + N D TAHAE++AIR C+ L Sbjct: 7 FMETAIQLALDNINRGGGPFGAVIVKDGKIVGQGCNSVTNHLDPTAHAEVMAIRNTCQAL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 IL ++Y + EPC MC +AI A I R+YY + Sbjct: 67 DTFILEGCEIYSSCEPCPMCLSAIYWAHIDRIYYACT 103 >gi|229179327|ref|ZP_04306681.1| Cytosine deaminase [Bacillus cereus 172560W] gi|228604225|gb|EEK61692.1| Cytosine deaminase [Bacillus cereus 172560W] Length = 158 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 47/102 (46%), Positives = 60/102 (58%), Gaps = 3/102 (2%) Query: 11 ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR-MGCRILSQ 68 ALEEA+ A N PVGAV V NN +I+R NR KD+TAHAEI AIR G + Sbjct: 2 ALEEAEMALKENTYPVGAVIVDGNNNVIARGRNRVHPQKDITAHAEIDAIRNAGEAMFDA 61 Query: 69 EILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 +I E +Y TLEPC MC I A+I+R+ + ++ G G Sbjct: 62 KIKNEKFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFG 103 >gi|270284659|ref|ZP_05966459.2| cytidine/deoxycytidylate deaminase family protein [Bifidobacterium gallicum DSM 20093] gi|270276606|gb|EFA22460.1| cytidine/deoxycytidylate deaminase family protein [Bifidobacterium gallicum DSM 20093] Length = 170 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 46/142 (32%), Positives = 65/142 (45%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+ +A A ++P+GA + ++I R N D AHAEI A+R L Sbjct: 28 MESAIAQALQAKQHGDVPIGACVLDAGGRVIGRGHNMRERNLDPLAHAEIEAMREAAATL 87 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPC MCA A + R+ +GA + K G + P Sbjct: 88 GSWNLEDCTLVVTLEPCPMCAGACLQTHVGRIVFGAWDAKLGACGSVWDLPRDPHIGAHP 147 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 E+Y GI E Q++ FF+ R Sbjct: 148 EVYGGIRESECAQLLTAFFRLR 169 >gi|255972217|ref|ZP_05422803.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T1] gi|255963235|gb|EET95711.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T1] Length = 102 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 39/87 (44%), Positives = 52/87 (59%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA+ A E+P+GAV V +II R N ++ TAHAE+ AI+ CR + Sbjct: 16 FMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACRGI 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLA 93 L E L+VTLEPC MC+ A+ LA Sbjct: 76 ENWRLEETQLFVTLEPCPMCSGAMLLA 102 >gi|226310134|ref|YP_002770028.1| guanine deaminase [Brevibacillus brevis NBRC 100599] gi|226093082|dbj|BAH41524.1| guanine deaminase [Brevibacillus brevis NBRC 100599] Length = 156 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 47/92 (51%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA+ V + +++ R N D TAHAEI AIR CR L L + DLY + EPC Sbjct: 25 PFGALVVKDGQVVGRGRNEVTTSNDPTAHAEIQAIREACRHLETFQLNDCDLYTSCEPCP 84 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC AI AR R +YY + + QF Sbjct: 85 MCLGAIYWARPRNVYYACTKEDAAHVGFDDQF 116 >gi|320335249|ref|YP_004171960.1| Guanine deaminase [Deinococcus maricopensis DSM 21211] gi|319756538|gb|ADV68295.1| Guanine deaminase [Deinococcus maricopensis DSM 21211] Length = 155 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 5/113 (4%) Query: 9 SCALEEAQNAALRNEI-----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 S ++EA AL N P GAV V + +II+R N D TAHAE+ AIR Sbjct: 3 STHMQEAARLALENVTSGHGGPFGAVIVKDGEIIARGANNVTASNDPTAHAEVTAIRAAA 62 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L + L + ++Y + EPC MC AI AR++R++YG + I QF Sbjct: 63 AKLGRFDLSDCEIYTSCEPCPMCLGAIYWARLQRVHYGCTQADADAIGFSDQF 115 >gi|26388773|dbj|BAB32363.2| unnamed protein product [Mus musculus] Length = 191 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 12/149 (8%) Query: 12 LEEAQ---NAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 +EEA N AL N E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 26 MEEATRMANEALENIEVPVGCLMVYNNEVVGKGTNEVNQTKNATRHAEMVAIDQVLDWCH 85 Query: 68 QE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT--L 119 Q + LYVT+EPC MCAAA+ L +I + YG N + GG + + L Sbjct: 86 QHGQSPSTVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADL 145 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + PG + + ++++ F+K+ Sbjct: 146 PNTGRPFQCIPGYRAEEAVELLKTFYKQE 174 >gi|297563744|ref|YP_003682718.1| CMP/dCMP deaminase zinc-binding protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848192|gb|ADH70212.1| CMP/dCMP deaminase zinc-binding protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 160 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 72/151 (47%), Gaps = 6/151 (3%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGC 63 + + A+ E + A ++PVGAV + + + G RE D TAHAE+LA+R Sbjct: 8 DAALRAAIAEGEAALETGDVPVGAVVLDADGAVLGTGRNEREATGDPTAHAEVLALRAAA 67 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R + L L VTLEPCTMCA A L+R+ RL YGA + K G + + Sbjct: 68 RARGEWRLGGCTLVVTLEPCTMCAGATVLSRVDRLVYGARDAKAGAAGSVWDAVRDPRLN 127 Query: 124 HSPEIYPGI-----SEQRSRQIIQDFFKERR 149 H PE+ P R ++ FF RR Sbjct: 128 HRPEVVPPDLVPRELSDRCSDLLSRFFARRR 158 >gi|254520799|ref|ZP_05132855.1| CMP/dCMP deaminase [Clostridium sp. 7_2_43FAA] gi|226914548|gb|EEH99749.1| CMP/dCMP deaminase [Clostridium sp. 7_2_43FAA] Length = 147 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/142 (36%), Positives = 77/142 (54%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ EA+NA E+PVG V V + ++I+ N +LK TAHAEILAI C+ L Sbjct: 3 YMDLAINEAKNAYNIGEVPVGVVVVKDGEVIASQHNLKEKLKLTTAHAEILAIEEACKKL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L ++YVTLEPC MCAAAI+ +RI RL+ G N G + + Sbjct: 63 NNWRLSGCEMYVTLEPCPMCAAAIAQSRISRLFIGTFNKDMGACGSTINLIDYNIFNWHV 122 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 ++ +++ S + F K+R Sbjct: 123 DVKWCYNQECSDLLTSFFIKQR 144 >gi|330825481|ref|YP_004388784.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus denitrificans K601] gi|329310853|gb|AEB85268.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus denitrificans K601] Length = 358 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/124 (36%), Positives = 63/124 (50%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V ++I+ N D TAHAEI A+R L L LYVTLE Sbjct: 25 GEVPVGAVLVRGGEVIATGRNAPIAGHDPTAHAEIAALRAAAARLGNYRLDGCTLYVTLE 84 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA A+ AR+ R+ YGA++PK G + + +H + G+ + ++ Sbjct: 85 PCAMCAGAMLHARLPRVVYGAADPKTGAAGSVVDLFAEPRLNHQTRVAGGVLAEECGALL 144 Query: 142 QDFF 145 FF Sbjct: 145 SGFF 148 >gi|317969787|ref|ZP_07971177.1| tRNA-specific adenosine deaminase [Synechococcus sp. CB0205] Length = 182 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 1/146 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIR 60 ++ ++M L A+ + EIPV AV + + + + NR + + HAE++A+ Sbjct: 16 QRHELWMRRLLRRAEAVGEKGEIPVAAVLLDGHGRALGWGVNRRQREQRPLGHAELMALE 75 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R+ + L VTLEPC MCA A+ AR+ ++ +GA +PK G + T Sbjct: 76 QAARLRGDWRFNDCSLIVTLEPCPMCAGALVQARMGQVIFGAHDPKRGALGGCLNLATDP 135 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 + HH + G+ E + ++ +FK Sbjct: 136 SAHHHMTVMGGVLELECKSRLEAWFK 161 >gi|319763286|ref|YP_004127223.1| cmp/dcmp deaminase zinc-binding protein [Alicycliphilus denitrificans BC] gi|317117847|gb|ADV00336.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus denitrificans BC] Length = 358 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/124 (36%), Positives = 63/124 (50%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V ++I+ N D TAHAEI A+R L L LYVTLE Sbjct: 25 GEVPVGAVLVRGGEVIATGRNAPIAGHDPTAHAEIAALRAAAARLGNYRLDGCTLYVTLE 84 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA A+ AR+ R+ YGA++PK G + + +H + G+ + ++ Sbjct: 85 PCAMCAGAMLHARLPRVVYGAADPKTGAAGSVVDLFAEPRLNHQTRVAGGVLAEECGALL 144 Query: 142 QDFF 145 FF Sbjct: 145 SGFF 148 >gi|302835481|ref|XP_002949302.1| hypothetical protein VOLCADRAFT_89616 [Volvox carteri f. nagariensis] gi|300265604|gb|EFJ49795.1| hypothetical protein VOLCADRAFT_89616 [Volvox carteri f. nagariensis] Length = 192 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/78 (50%), Positives = 47/78 (60%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V ++I++R NR L+ AHAE+L I G LS L LY TLEPC Sbjct: 58 VPVGAVLVHGDRILARGHNRVHRLRSPVAHAEMLCITAGASKLSSWRLLGATLYATLEPC 117 Query: 84 TMCAAAISLARIRRLYYG 101 MCA AI ARI R+ YG Sbjct: 118 PMCAGAILQARIARVVYG 135 >gi|229046739|ref|ZP_04192382.1| Cytosine deaminase [Bacillus cereus AH676] gi|229110499|ref|ZP_04240069.1| Cytosine deaminase [Bacillus cereus Rock1-15] gi|229128373|ref|ZP_04257354.1| Cytosine deaminase [Bacillus cereus BDRD-Cer4] gi|228655232|gb|EEL11089.1| Cytosine deaminase [Bacillus cereus BDRD-Cer4] gi|228672983|gb|EEL28257.1| Cytosine deaminase [Bacillus cereus Rock1-15] gi|228724557|gb|EEL75871.1| Cytosine deaminase [Bacillus cereus AH676] Length = 158 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/102 (45%), Positives = 60/102 (58%), Gaps = 3/102 (2%) Query: 11 ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR-MGCRILSQ 68 ALEEA+ A N PVGAV V NN +I+R NR KD+TAHAE+ AIR G + Sbjct: 2 ALEEAEKALKENTYPVGAVIVDGNNNVIARGRNRVHPEKDITAHAELDAIRNAGEAMFDA 61 Query: 69 EILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 +I E +Y TLEPC MC I A+I+R+ + ++ G G Sbjct: 62 KIKNERFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFG 103 >gi|156087547|ref|XP_001611180.1| cytosine deaminase [Babesia bovis T2Bo] gi|154798434|gb|EDO07612.1| cytosine deaminase, putative [Babesia bovis] Length = 191 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 73/159 (45%), Gaps = 26/159 (16%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM+ AL+EA++A R E+ VG V V K I++RAGN + + T H E AI Sbjct: 10 FMTAALDEARDALERGEVAVGCVIVDKEKKTIVARAGNSTNQKHNSTWHCEFGAIDTLFS 69 Query: 65 ILS------------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG--- 109 ++ Q L+VT EPC MCA A+ + + +YYG N K GG Sbjct: 70 LVPDGKIGANDQANIQAFTSRYALFVTCEPCIMCATALHIVGLTDIYYGCDNEKFGGCGS 129 Query: 110 ---IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + G + CH GI + + Q++Q F+ Sbjct: 130 VLSLHEGYGDFPPLNCHK------GIRAEEAIQLLQTFY 162 >gi|20092219|ref|NP_618294.1| cytidine/deoxycytidylate deaminase family protein [Methanosarcina acetivorans C2A] gi|19917452|gb|AAM06774.1| cytidine/deoxycytidylate deaminase family protein [Methanosarcina acetivorans C2A] Length = 162 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/115 (37%), Positives = 59/115 (51%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +K +FM A+E + + + P GAV N KIIS + N+ L D TAHAEI AIR Sbjct: 8 EKDTLFMRRAIELSLESVKKGGGPFGAVITKNGKIISESCNQVTVLNDPTAHAEISAIRE 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 R L+ L ++Y + EPC MC AI ARI R+++ + I F Sbjct: 68 AARKLNAPDLKGCEIYASCEPCPMCLGAIYWARIDRVFFANTREDADNIGFDDSF 122 >gi|224283917|ref|ZP_03647239.1| Cytosine/adenosine deaminase [Bifidobacterium bifidum NCIMB 41171] gi|313141068|ref|ZP_07803261.1| cytosine/adenosine deaminase [Bifidobacterium bifidum NCIMB 41171] gi|313133578|gb|EFR51195.1| cytosine/adenosine deaminase [Bifidobacterium bifidum NCIMB 41171] Length = 150 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 69/144 (47%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ + A + ++PVGAV VL+ + +I R NR D AHAEI A+R + Sbjct: 8 MCEAIALGERAGKQGDVPVGAV-VLDERGTVIGRGRNRREAGHDPLAHAEIEAMREAAQA 66 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L VTLEPC MCA A I R+ +GA + K G + H Sbjct: 67 RGDWNLADCTLVVTLEPCPMCAGACIQTHIGRIVFGAWDAKLGACGSIWDIPRDPHVGHV 126 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P++ G+ E +++ FF RR Sbjct: 127 PQVVGGVREAACARLLTGFFASRR 150 >gi|116794256|gb|ABK27067.1| unknown [Picea sitchensis] gi|116794306|gb|ABK27088.1| unknown [Picea sitchensis] Length = 186 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 7 FMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+S A+EEA + + P GA+ V N+++I+ N + D TAHAE+ AIR C Sbjct: 34 FLSKAVEEAYSGVNCGHGGPFGAIVVRNDEVIASCHNMVLKNMDPTAHAEVTAIREACNK 93 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L + L + +++ + EPC MC AI L+RI+RL YGA Sbjct: 94 LGRIELSDCEIFASCEPCPMCFGAIHLSRIKRLLYGA 130 >gi|329938756|ref|ZP_08288152.1| putative deaminase [Streptomyces griseoaurantiacus M045] gi|329302247|gb|EGG46139.1| putative deaminase [Streptomyces griseoaurantiacus M045] Length = 157 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRE-LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PVGAV + + G+ RE D TAHAE+LA+R + L L VTL Sbjct: 15 GDVPVGAVVLSADGTPLATGHNEREATGDPTAHAEVLALRRAAAATGEWRLSGCTLVVTL 74 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ +R+ R+ YGA + K G + +H PE+ G+ + ++ Sbjct: 75 EPCTMCAGALQQSRVDRVVYGARDDKAGAAGSLWDLLRDRRLNHRPEVIEGVLAEDCARL 134 Query: 141 IQDFFK 146 + DFF+ Sbjct: 135 LTDFFR 140 >gi|325838575|ref|ZP_08166576.1| guanine deaminase [Turicibacter sp. HGF1] gi|325490801|gb|EGC93104.1| guanine deaminase [Turicibacter sp. HGF1] Length = 154 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 1/111 (0%) Query: 7 FMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+EEA+N ++ P GAV V +N++I++A N + D T HAEI AIR+ R Sbjct: 4 YMKMAIEEAENGVKCKHGGPFGAVIVKDNQVIAKAHNTVVKENDPTCHAEINAIRLASRT 63 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L+ L + L+ + EPC MC +AI A I +YYG + I +F Sbjct: 64 LNTFKLNDCLLFTSSEPCPMCLSAILWAGIETVYYGCTVEDANKIGFADEF 114 >gi|189204912|ref|XP_001938791.1| tRNA-specific adenosine deaminase subunit TAD2 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187985890|gb|EDU51378.1| tRNA-specific adenosine deaminase subunit TAD2 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 234 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 6/142 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ A+ A +E PVG V V + +II R N + T HAE +AI IL Sbjct: 12 FMREAIAMAELALKSDETPVGCVFVKDGEIIGRGMNETNRTLNGTRHAEFVAI---AGIL 68 Query: 67 SQE---ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 S+ IL E DLYVT+EPC MCA+ + IR +Y+G N + GG ++ + Sbjct: 69 SKHPISILNETDLYVTVEPCVMCASMLRQYGIRAVYFGCWNERFGGTGGVLNIHSDPSVD 128 Query: 124 HSPEIYPGISEQRSRQIIQDFF 145 + GI + + +++ F+ Sbjct: 129 KPYPVTGGIFREEAIMLLRKFY 150 >gi|50742655|ref|XP_419709.1| PREDICTED: similar to DEADC1 protein [Gallus gallus] Length = 172 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 6/115 (5%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ +M A AQ A E+PVG + V + I + N E K+ T HAE++AI Sbjct: 1 MEDEAAWMERAFSMAQEALEAGEVPVGCLLVYDGAAIGKGRNEVNETKNATRHAEMVAID 60 Query: 61 MGCRILSQ------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 Q E+ LYVT+EPC MCAAA+ L +I R+ YG N + GG Sbjct: 61 QVLEWCQQHKKDHEEVFSHSVLYVTVEPCIMCAAALRLMKIPRVVYGCRNERFGG 115 >gi|328771384|gb|EGF81424.1| hypothetical protein BATDEDRAFT_87367 [Batrachochytrium dendrobatidis JAM81] Length = 182 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/113 (39%), Positives = 63/113 (55%), Gaps = 10/113 (8%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIR--MGC 63 +M+ AL+ A +A E+PVG V V +K II + NR E + HAE AI M Sbjct: 12 YMTMALQLASDAYDVGEVPVGCVFVHASKGIIGQGRNRTNESLNGVRHAEFEAIDQIMSM 71 Query: 64 RILSQEI-------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 R L ++ P+ D+YVT+EPC MCA+A+ +IRR+ +G N K GG Sbjct: 72 RPLETDLDTYVKTTFPQTDVYVTVEPCIMCASALRHLQIRRVVFGCGNDKFGG 124 >gi|42521730|ref|NP_967110.1| cytidine/deoxycytidylate deaminase family protein [Bdellovibrio bacteriovorus HD100] gi|39574260|emb|CAE77764.1| cytidine/deoxycytidylate deaminase family protein [Bdellovibrio bacteriovorus HD100] Length = 155 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 48/92 (52%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + KII N+ D TAHAE+ AIR C +S L ++Y + EPC Sbjct: 24 PFGAVIVKDGKIIGEGWNKVTSSNDPTAHAEVSAIRDACSKISNFELAGAEIYTSCEPCP 83 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC +AI ARI ++YYG + I F Sbjct: 84 MCLSAIYWARIEKIYYGNTRKDAAEINFDDDF 115 >gi|194398441|ref|YP_002036741.1| cytosine/adenosine deaminase [Streptococcus pneumoniae G54] gi|194358108|gb|ACF56556.1| Cytosine/adenosine deaminase [Streptococcus pneumoniae G54] Length = 106 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/97 (45%), Positives = 59/97 (60%), Gaps = 4/97 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARI 95 LS+E +D L+VT+EPC MC+ AI LARI Sbjct: 65 DA--NLSEESWRLLDCTLFVTIEPCVMCSGAIGLARI 99 >gi|293608518|ref|ZP_06690821.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829091|gb|EFF87453.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 161 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/138 (36%), Positives = 70/138 (50%), Gaps = 7/138 (5%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+KG F+ A+E A + P GAV V N +II+ N+ D TAHAE+LAIR Sbjct: 2 MEKGEQFLRKAIELAYKNIEKGGRPFGAVVVKNGEIIASGVNQILVTNDPTAHAELLAIR 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L +Y + PC MC AA+ LA I+ + Y SN E+GT F L+ Sbjct: 62 AASQVLGSANLEGCSVYASGHPCPMCMAAMRLAGIKSVSYAYSN------EDGTPF-GLS 114 Query: 121 TCHHSPEIYPGISEQRSR 138 T E+ +EQ + Sbjct: 115 TAEIYIELAKPFAEQSMK 132 >gi|293375825|ref|ZP_06622095.1| putative guanine deaminase [Turicibacter sanguinis PC909] gi|292645602|gb|EFF63642.1| putative guanine deaminase [Turicibacter sanguinis PC909] Length = 154 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 1/111 (0%) Query: 7 FMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+EEA+N ++ P GAV V +N++I++A N + D T HAEI AIR+ R Sbjct: 4 YMKMAIEEAENGVKCKHGGPFGAVIVKDNQVIAKAHNTVVKENDPTCHAEINAIRLASRT 63 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L+ L + L+ + EPC MC +AI A I +YYG + I +F Sbjct: 64 LNTFKLNDCLLFTSSEPCPMCLSAILWAGIETVYYGCTVEDANKIGFADEF 114 >gi|168002130|ref|XP_001753767.1| predicted protein [Physcomitrella patens subsp. patens] gi|162695174|gb|EDQ81519.1| predicted protein [Physcomitrella patens subsp. patens] Length = 191 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 3/98 (3%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 F++ A +EA + A+R E P GAV V + +I+++A N + KD TAHAEI+AI+ C+ Sbjct: 41 FLTVAAKEA-DMAMRKEEGGPFGAVIVRDGEIVAQAHNEVLKQKDPTAHAEIVAIQKACK 99 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L + L + +Y + EPC M AA+ LAR+ RL YGA Sbjct: 100 KLGKIELSDCVIYSSCEPCPMSFAAMYLARLPRLVYGA 137 >gi|163787392|ref|ZP_02181839.1| cytidine/deoxycytidylate deaminase family protein [Flavobacteriales bacterium ALC-1] gi|159877280|gb|EDP71337.1| cytidine/deoxycytidylate deaminase family protein [Flavobacteriales bacterium ALC-1] Length = 159 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/108 (38%), Positives = 56/108 (51%), Gaps = 5/108 (4%) Query: 14 EAQNAALR----NEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 EA NAAL+ NE P G V V + +I+ R N+ D TAHAE+ AIR C+ L Sbjct: 12 EAVNAALKGMNNNEGGPFGCVVVKDGEIVGRGNNKVTSTNDPTAHAEVTAIRDACKNLDS 71 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L +Y + EPC MC AI AR ++YYG++ I +F Sbjct: 72 FQLEGCQIYTSCEPCPMCLGAIYWARPDKVYYGSNQVDAANIGFDDEF 119 >gi|325283258|ref|YP_004255799.1| tRNA(Ile)-lysidine synthase [Deinococcus proteolyticus MRP] gi|324315067|gb|ADY26182.1| tRNA(Ile)-lysidine synthase [Deinococcus proteolyticus MRP] Length = 529 Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 3/90 (3%) Query: 23 EIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGA AVL+ ++ NR+RE D+T HAE+ A+R L L L VTL Sbjct: 400 EVPVGA-AVLDPAGAVVGLGRNRSRERGDMTRHAELEALRQAASALGTPYLSGCTLAVTL 458 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGI 110 EPC MC A AR+ R+ YGA+NP+ G + Sbjct: 459 EPCPMCLGAALEARVGRIVYGAANPRAGAL 488 >gi|317051257|ref|YP_004112373.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum S5] gi|316946341|gb|ADU65817.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum S5] Length = 157 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/117 (36%), Positives = 58/117 (49%), Gaps = 1/117 (0%) Query: 1 MKKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M V+M A+ A QN + P GAV V +++ R N D TAHAEI+AI Sbjct: 1 MSDHRVYMEQAIAMARQNIDSGDGGPFGAVIVREGQVVGRGRNGVTSSLDPTAHAEIVAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 R C L L + D+Y + EPC MC AI AR+R +YY A+ + +F Sbjct: 61 RDACANLKTFHLEDCDIYTSCEPCPMCLGAIYWARLRAIYYAANRQDAARVNFSDEF 117 >gi|149744219|ref|XP_001497309.1| PREDICTED: similar to deaminase domain containing 1 [Equus caballus] Length = 186 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 9/138 (6%) Query: 19 ALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG---CRILSQ---EIL 71 AL N E+PVG + V NN+++ + N + K+ T HAE++AI CR + E+ Sbjct: 31 ALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQALAWCRGRGRCPAEVF 90 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT--LATCHHSPEIY 129 LYVT+EPC MCAAA+ L +I + YG N + GG + + L + Sbjct: 91 ERAVLYVTVEPCVMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRPFQCV 150 Query: 130 PGISEQRSRQIIQDFFKE 147 PG + + ++++ F+K+ Sbjct: 151 PGYRAEEAVEMLKTFYKQ 168 >gi|227506029|ref|ZP_03936078.1| nucleoside deaminase [Corynebacterium striatum ATCC 6940] gi|227197311|gb|EEI77359.1| nucleoside deaminase [Corynebacterium striatum ATCC 6940] Length = 156 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/138 (36%), Positives = 66/138 (47%), Gaps = 18/138 (13%) Query: 22 NEIPVGAV---AVLNNKIISRAGNRNRELKDVTAHAEILAIRM-------GCRILSQEIL 71 +IPVGAV A N +S NR + D TAHAE+ AIR G R+ EI+ Sbjct: 27 GDIPVGAVLYDAAGNE--LSTGVNRREQRGDPTAHAEVEAIRAAVAKHGNGWRLEGCEIV 84 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 VTLEPC MCA AI AR+ + +GA PK G + H PE+ G Sbjct: 85 ------VTLEPCAMCAGAIQGARVASVVFGAFEPKTGACGSLVDVLRAPGSLHVPEVRAG 138 Query: 132 ISEQRSRQIIQDFFKERR 149 + E+ ++ FF E R Sbjct: 139 VCEEECAGLLTGFFGELR 156 >gi|302544137|ref|ZP_07296479.1| cytidine and deoxycytidylate deaminase [Streptomyces hygroscopicus ATCC 53653] gi|302461755|gb|EFL24848.1| cytidine and deoxycytidylate deaminase [Streptomyces himastatinicus ATCC 53653] Length = 166 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/140 (36%), Positives = 70/140 (50%), Gaps = 1/140 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALEEA A ++PVGAV + + ++ R N D TAHAE+LA+R R L Sbjct: 25 MRLALEEAVRAPETGDVPVGAVVLGPDGTVLGRGRNEREAHGDPTAHAEVLALRAAARRL 84 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPC MCA AI L+R+ R+ YGA + K G + + +H P Sbjct: 85 GGWRLTGCTLVVTLEPCAMCAGAIVLSRLDRVVYGAIDEKAGAVGSLWDIVRDRRLNHRP 144 Query: 127 EIYPGISEQRSRQIIQDFFK 146 E+ + + FF+ Sbjct: 145 EVIHDVLPDECAAPLTAFFR 164 >gi|169599362|ref|XP_001793104.1| hypothetical protein SNOG_02499 [Phaeosphaeria nodorum SN15] gi|111069591|gb|EAT90711.1| hypothetical protein SNOG_02499 [Phaeosphaeria nodorum SN15] Length = 265 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/148 (35%), Positives = 75/148 (50%), Gaps = 18/148 (12%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ A+ A +E PVG V V + +II R N + T HAE +AI IL Sbjct: 73 FMREAIAMAELALKSDETPVGCVFVKDGEIIGRGMNETNRTLNGTRHAEFVAI---AGIL 129 Query: 67 SQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 S+ +IL E DLYVT+EPC MCA+ + IR +Y+G N + GG + H Sbjct: 130 SKSPVKILNETDLYVTVEPCVMCASMLRQYGIRAVYFGCWNERFGGTGG------VLNIH 183 Query: 124 HSPEI---YP---GISEQRSRQIIQDFF 145 P I YP GI + + +++ F+ Sbjct: 184 SDPSIDKPYPVTGGIFREEAIMLLRKFY 211 >gi|150398810|ref|YP_001322577.1| CMP/dCMP deaminase zinc-binding [Methanococcus vannielii SB] gi|150011513|gb|ABR53965.1| CMP/dCMP deaminase zinc-binding [Methanococcus vannielii SB] Length = 146 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/117 (37%), Positives = 62/117 (52%), Gaps = 5/117 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA+ A+ IP+GAV V NK+I R N+ + V HAE+ A+ RI Sbjct: 4 FMEEAIKEAKLGAIEGGIPIGAVLVYKNKVIGRGHNKRIQKNSVVFHAEMDALENAGRIN 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----NGTQFYTL 119 S I + +LY TL PC MC+ AI L I+++ G + G E NG + L Sbjct: 64 SS-IYKDCELYTTLSPCIMCSGAILLYNIKKVIIGENKTFKGAEELLEKNGVKLEVL 119 >gi|332666596|ref|YP_004449384.1| CMP/dCMP deaminase zinc-binding protein [Haliscomenobacter hydrossis DSM 1100] gi|332335410|gb|AEE52511.1| CMP/dCMP deaminase zinc-binding protein [Haliscomenobacter hydrossis DSM 1100] Length = 137 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 64/129 (49%), Gaps = 4/129 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ C A +A L N PVGAV + + II+ R DVT HAEI AIR IL Sbjct: 10 FLRCHELAATSAELGNP-PVGAVLIRDGLIIAEGLELARSSGDVTRHAEIEAIRAAVHIL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS- 125 L + +L T EPC MCA AI RIRR+ Y + P GG+ + + T + Sbjct: 69 KTSDLSDCELITTHEPCVMCAYAIRHYRIRRVVYELAVPTVGGVSSKFPVLSDPTFWEAR 128 Query: 126 --PEIYPGI 132 PEI+ G Sbjct: 129 PVPEIHLGF 137 >gi|86143339|ref|ZP_01061741.1| guanine deaminase [Leeuwenhoekiella blandensis MED217] gi|85830244|gb|EAQ48704.1| guanine deaminase [Leeuwenhoekiella blandensis MED217] Length = 156 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 5/110 (4%) Query: 12 LEEAQNAALR----NEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 ++EA AAL+ NE P G V V + KII + N+ D TAHAE+ AIR C+ L Sbjct: 7 MQEAVTAALKGMQNNEGGPFGCVIVKDGKIIGKGNNKVTSTNDPTAHAEVTAIRDACKNL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L LY + EPC MC AI AR ++YYG++ I F Sbjct: 67 GSFQLEGCILYTSCEPCPMCLGAIYWARPEKVYYGSTKTDAAHIGFDDDF 116 >gi|330817316|ref|YP_004361021.1| CMP/dCMP deaminase, zinc-binding protein [Burkholderia gladioli BSR3] gi|327369709|gb|AEA61065.1| CMP/dCMP deaminase, zinc-binding protein [Burkholderia gladioli BSR3] Length = 217 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/124 (37%), Positives = 66/124 (53%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I+R N D +AHAE+ A+R + L LP +LYVTLE Sbjct: 52 GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAAQALGNYRLPGCELYVTLE 111 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC+ AI ARI R+ YGA +PK G + +H + G+ + + Sbjct: 112 PCLMCSGAIMHARIARVVYGAPDPKTGACGGVVDAFANPQLNHHTSVTGGVLAEECGDAL 171 Query: 142 QDFF 145 + FF Sbjct: 172 RSFF 175 >gi|307151761|ref|YP_003887145.1| Guanine deaminase [Cyanothece sp. PCC 7822] gi|306981989|gb|ADN13870.1| Guanine deaminase [Cyanothece sp. PCC 7822] Length = 158 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/92 (39%), Positives = 50/92 (54%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V +KII++ N+ D TAHAE++AIR C++L L +LY + EPC Sbjct: 27 PFGAVIVKEHKIIAKGYNQVTSTNDPTAHAEVVAIRQACQLLQTFELKGCELYTSCEPCP 86 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC AAI A + ++YY + I F Sbjct: 87 MCLAAIYWASVDKVYYANTKVDAAQIGFDDNF 118 >gi|299139283|ref|ZP_07032459.1| Guanine deaminase [Acidobacterium sp. MP5ACTX8] gi|298598963|gb|EFI55125.1| Guanine deaminase [Acidobacterium sp. MP5ACTX8] Length = 157 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/79 (44%), Positives = 45/79 (56%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + K+I+ N+ D TAHAE+ AIR C L L D+Y + EPC Sbjct: 26 PFGAVVVKDGKVIATGANQVTATNDPTAHAEVTAIRNACTALGHFQLDGCDVYSSCEPCP 85 Query: 85 MCAAAISLARIRRLYYGAS 103 MC AA+ +R R +YYG S Sbjct: 86 MCLAALYWSRCRAIYYGNS 104 >gi|297570087|ref|YP_003691431.1| CMP/dCMP deaminase zinc-binding protein [Desulfurivibrio alkaliphilus AHT2] gi|296926002|gb|ADH86812.1| CMP/dCMP deaminase zinc-binding protein [Desulfurivibrio alkaliphilus AHT2] Length = 173 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 14/154 (9%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA--HAEILAI 59 ++ + FM ALE+A+ A E PVGAV V ++++ +N T HAEI+A+ Sbjct: 5 EQHHYFMGLALEQARVALQAGEFPVGAVIVAGGRVVAEGNRQNSGGTAPTELDHAEIVAL 64 Query: 60 RMGCRILSQEILPEVD-----LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 R +L+++ PE++ LY T+EPC MC A + L +RR+ Y + GGG Sbjct: 65 R---GLLARQ--PEIERGGLTLYATMEPCLMCYATLLLNGVRRIVYAYEDAMGGGTSLPL 119 Query: 115 QFYTLATCHHSP--EIYPGISEQRSRQIIQDFFK 146 +P EI P I + S + QDFF+ Sbjct: 120 TELNPLYREMAPAVEITPHIRRRESLALFQDFFR 153 >gi|186476063|ref|YP_001857533.1| CMP/dCMP deaminase zinc-binding [Burkholderia phymatum STM815] gi|184192522|gb|ACC70487.1| CMP/dCMP deaminase zinc-binding [Burkholderia phymatum STM815] Length = 213 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 66/122 (54%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I++ N D +AHAE+ A+R L LP +LYVTLEPC Sbjct: 61 VPVGAVLVRGDEVIAKGFNHPIGGHDPSAHAEMAALRAAALTLENYRLPGCELYVTLEPC 120 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARI R+ YGA +PK G + + +H + G+ E+ ++ Sbjct: 121 LMCAGAIMHARIARVVYGARDPKTGACGSVVDAFANTQLNHHTTVTGGVLEEECAAALRA 180 Query: 144 FF 145 FF Sbjct: 181 FF 182 >gi|71003327|ref|XP_756344.1| hypothetical protein UM00197.1 [Ustilago maydis 521] gi|46096349|gb|EAK81582.1| hypothetical protein UM00197.1 [Ustilago maydis 521] Length = 1260 Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 48/124 (38%), Positives = 64/124 (51%), Gaps = 18/124 (14%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL AQ A NE+PVG V V ++I+R NR EL + T HAE+ AI ++ Sbjct: 937 WMREALVMAQEALDANEVPVGGVFVRKGEVIARGRNRTNELMNATRHAELEAIDHILSVM 996 Query: 67 ---------SQEILPEVD-------LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 + PE D LYVT+EPC MC AA+ I R+ +GA N + GG Sbjct: 997 PPSAPDFAVAPHSGPEGDNPFKDTTLYVTIEPCIMCGAALRQIGIGRVVFGAGNERFGG- 1055 Query: 111 ENGT 114 NG+ Sbjct: 1056 -NGS 1058 >gi|79361008|ref|NP_564523.3| emb2191 (embryo defective 2191); catalytic/ hydrolase/ zinc ion binding [Arabidopsis thaliana] gi|48310033|gb|AAT41740.1| At1g48175 [Arabidopsis thaliana] gi|50198832|gb|AAT70448.1| At1g48175 [Arabidopsis thaliana] gi|332194138|gb|AEE32259.1| Cytidine/deoxycytidylate deaminase family protein [Arabidopsis thaliana] Length = 182 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 15/115 (13%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL +A+ A E+PVG V + + K+I+ NR E ++ T HAE+ AI +++ Sbjct: 12 YMGFALHQAKLALEALEVPVGCVFLEDGKVIASGRNRTNETRNATRHAEMEAID---QLV 68 Query: 67 SQ------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 Q E + LYVT EPC MCA+A+S I+ +YYG N K GG Sbjct: 69 GQWQKDGLSPSQVAEKFSKCVLYVTCEPCIMCASALSFLGIKEVYYGCPNDKFGG 123 >gi|159471219|ref|XP_001693754.1| predicted protein [Chlamydomonas reinhardtii] gi|158283257|gb|EDP09008.1| predicted protein [Chlamydomonas reinhardtii] Length = 143 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 2/129 (1%) Query: 22 NEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 +E+PVGAV V + +++ NR L+ AHAE+L + G L LYVT Sbjct: 15 DEVPVGAVLVAADGATVLAAGHNRVHRLRSPLAHAEMLCLAAGAARSRAWRLLGTTLYVT 74 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA A+ AR+ R+ YGA P+ G + H S + G + Sbjct: 75 LEPCPMCAGALMQARVGRVVYGARQPRLGADGSWAPPPPPHPFHDSIVVEGGCLAEECAD 134 Query: 140 IIQDFFKER 148 +++ FF+ R Sbjct: 135 VMRAFFRRR 143 >gi|297847068|ref|XP_002891415.1| EMB2191 [Arabidopsis lyrata subsp. lyrata] gi|297337257|gb|EFH67674.1| EMB2191 [Arabidopsis lyrata subsp. lyrata] Length = 192 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 15/115 (13%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL +A+ A E+PVG V + + K+I+ NR E ++ T HAE+ AI +++ Sbjct: 15 YMGFALHQAKLALEALEVPVGCVLLEDGKVIASGRNRTNETRNATRHAEMEAID---QLV 71 Query: 67 SQ------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 Q E + LYVT EPC MCA+A+S I+ +YYG N K GG Sbjct: 72 GQWQEDGLSPSQVAEKFSKCILYVTCEPCIMCASALSFLGIKEVYYGCPNDKFGG 126 >gi|218885276|ref|YP_002434597.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756230|gb|ACL07129.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 175 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 + E+PVGAV V +II N D +AHAE++A+R CR L L VT Sbjct: 46 QGEVPVGAVVVDRQGRIIGTGHNTPVASHDPSAHAEMVALREACRNTGNYRLDGAVLVVT 105 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA A+ AR+ + YGA + K G + + +H + Sbjct: 106 LEPCLMCAGAMVHARVAGVVYGAPDLKAGAVTSCLDALDQPFHNHRVWHMGHVRAAECGA 165 Query: 140 IIQDFFKERR 149 ++Q+FF+ERR Sbjct: 166 LLQEFFRERR 175 >gi|307823574|ref|ZP_07653803.1| CMP/dCMP deaminase zinc-binding [Methylobacter tundripaludum SV96] gi|307735559|gb|EFO06407.1| CMP/dCMP deaminase zinc-binding [Methylobacter tundripaludum SV96] Length = 155 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 1/99 (1%) Query: 6 VFMSCALE-EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 VF+ A++ A+NA P GA+ V +N++++ +GN+ D TAHAE++AIR+ C+ Sbjct: 4 VFLQQAVDLAAENARSGQGGPYGAIIVKDNQLVAASGNKVTSTIDPTAHAEVMAIRLACK 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L+ L LY + EPC MC AI AR+ ++Y+ S Sbjct: 64 KLNDFQLQGCILYSSCEPCPMCLGAIYWARLAKVYFACS 102 >gi|61098160|ref|NP_080024.3| tRNA-specific adenosine deaminase 2 [Mus musculus] gi|81885246|sp|Q6P6J0|ADAT2_MOUSE RecName: Full=tRNA-specific adenosine deaminase 2; AltName: Full=Deaminase domain-containing protein 1; AltName: Full=tRNA-specific adenosine-34 deaminase subunit ADAT2 gi|38328211|gb|AAH62195.1| Adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae) [Mus musculus] gi|148671551|gb|EDL03498.1| deaminase domain containing 1 [Mus musculus] Length = 191 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 8/149 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 25 WMEEAMRMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWC 84 Query: 67 SQE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118 Q + LYVT+EPC MCAAA+ L +I + YG N + GG + + Sbjct: 85 HQHGQSPSTVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 144 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 145 LPNTGRPFQCIPGYRAEEAVELLKTFYKQ 173 >gi|308803957|ref|XP_003079291.1| Cytosine deaminase FCY1 and related enzymes (ISS) [Ostreococcus tauri] gi|116057746|emb|CAL53949.1| Cytosine deaminase FCY1 and related enzymes (ISS) [Ostreococcus tauri] Length = 205 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 16/149 (10%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 AL EA+ A E+P G V + +I++R N ++ T HAE A+ R ++ Sbjct: 34 ALREARRALDAWEVPCGCALVRDGEIVARGRNATNRTRNGTRHAEFEAVDALLRAHDGDV 93 Query: 71 ----LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-------- 118 E+ LYVT EPC MCA A+S +RR+ YG +N K GG NGT Sbjct: 94 DACGFEEMTLYVTCEPCVMCAGAMSALGVRRVVYGCANDKFGG--NGTVLDVHDSGCGRC 151 Query: 119 --LATCHHSPEIYPGISEQRSRQIIQDFF 145 + T + E G+ E + ++ QDF+ Sbjct: 152 DGVGTKGATYESVGGLFETEAIRLFQDFY 180 >gi|327261885|ref|XP_003215757.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Anolis carolinensis] Length = 160 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 7/102 (6%) Query: 15 AQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS------ 67 A AL N E+PVG + V NN++I + N E K+ T HAE++AI Sbjct: 2 AAKEALENGEVPVGCLMVYNNEVIGKGKNEVNETKNATRHAEMVAIDQAIDWCHKQKKRM 61 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 +E+ LYVT+EPC MCAAA+ + +I + YG N + GG Sbjct: 62 EEVFLHTVLYVTVEPCIMCAAALRMMKIPLVVYGCQNERFGG 103 >gi|221129263|ref|XP_002158148.1| PREDICTED: similar to tRNA-specific adenosine deaminase [Hydra magnipapillata] Length = 226 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 5/108 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL A+ A + E+PVG V + +N +I+ N K+ T HAEI+A+ Sbjct: 46 FMKKALVMAKVALEKGEVPVGCVIIHDNIVIADGYNDVNRTKNATRHAEIIALEKARFYF 105 Query: 67 SQ-----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 Q + E LYVT EPC MCAAA+ ++ +++++YG +N + GG Sbjct: 106 LQAGKNLNSMSECVLYVTTEPCIMCAAALRISGLKKVFYGCTNQRFGG 153 >gi|169234864|ref|NP_001108500.1| deaminase domain containing 1 [Rattus norvegicus] gi|165970946|gb|AAI58617.1| Deadc1 protein [Rattus norvegicus] Length = 191 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 8/149 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63 +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI C Sbjct: 25 WMEEAMRMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWC 84 Query: 64 RILSQE---ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118 Q + LYVT+EPC MCAAA+ L +I + YG N + GG + + Sbjct: 85 HRHGQSPSAVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 144 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 145 LPNTGRPFQCIPGYRAEEAVELLKTFYKQ 173 >gi|330933338|ref|XP_003304140.1| hypothetical protein PTT_16586 [Pyrenophora teres f. teres 0-1] gi|311319472|gb|EFQ87774.1| hypothetical protein PTT_16586 [Pyrenophora teres f. teres 0-1] Length = 293 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 6/142 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ A+ A +E PVG V V + II R N + T HAE +AI IL Sbjct: 71 FMREAIAMAELALKSDETPVGCVFVKDGHIIGRGMNETNRTLNGTRHAEFVAI---AGIL 127 Query: 67 SQE---ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 S+ IL E DLYVT+EPC MCA+ + IR +Y+G N + GG ++ + Sbjct: 128 SKHPISILNETDLYVTVEPCVMCASMLRQYGIRAVYFGCWNERFGGTGGVLNIHSDPSVD 187 Query: 124 HSPEIYPGISEQRSRQIIQDFF 145 + GI + + +++ F+ Sbjct: 188 KPYPVTGGIFREEAIMLLRKFY 209 >gi|126696279|ref|YP_001091165.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9301] gi|126543322|gb|ABO17564.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9301] Length = 171 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 2/144 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +MS L ++ + E+P+ ++ + + I R NR D HAEI+A+R I Sbjct: 26 WMSSILRRSEEIG-KVELPICSIILDERGRCIGRGVNRRNINNDPLGHAEIMALRQASLI 84 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + E + LEPCTMCA+A+ AR+ ++ +GA + K GG+ + HH Sbjct: 85 KNDWRFNECIIITNLEPCTMCASALIQARMGKVVFGAYDKKRGGLGGSIDLSKHKSSHHK 144 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 EI GI E + +Q +FK+ R Sbjct: 145 MEIVGGILEDECCKNLQLWFKKLR 168 >gi|89097617|ref|ZP_01170506.1| guanine deaminase [Bacillus sp. NRRL B-14911] gi|89087913|gb|EAR67025.1| guanine deaminase [Bacillus sp. NRRL B-14911] Length = 159 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 66/144 (45%), Gaps = 18/144 (12%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A+E A +NAA P GAV V + +I NR L D TAHAEI AIR C Sbjct: 9 FMENAVEAALENAAAHLGGPFGAVVVKDGTVIGTGTNRVTSLNDPTAHAEIQAIRAACLH 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L ++Y + EPC MC AI AR + +Y+ + QF Sbjct: 69 LQDFQLSGCEIYTSCEPCPMCFGAIYWARPKAVYFACTKEDAAAAGFDDQF--------- 119 Query: 126 PEIYPGIS---EQRS---RQIIQD 143 IY +S EQRS RQ+ D Sbjct: 120 --IYEQLSLPLEQRSIEMRQVKMD 141 >gi|149538332|ref|XP_001507477.1| PREDICTED: similar to DEADC1 protein, partial [Ornithorhynchus anatinus] Length = 121 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 12/104 (11%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ------ 68 AQ A E+PVG + V NNKI+ N E K+ T HAE++AI ++L+ Sbjct: 1 AQEALENGEVPVGCLMVYNNKIVGMGRNEVNETKNATRHAEMVAID---QVLNWCLRRGK 57 Query: 69 ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 E+ LYVT+EPC MCAAA+ + RI + YG N + GG Sbjct: 58 NPTEVFQRTVLYVTVEPCIMCAAALRIMRIPLVVYGCQNERFGG 101 >gi|50954049|ref|YP_061337.1| cytosine/adenosine deaminase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950531|gb|AAT88232.1| cytosine/adenosine deaminase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 143 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 7/132 (5%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PV A+ V + + G REL +D TAHAE+LA+R + L L VTL Sbjct: 15 GDVPVAALVVDAGERVIGTGRNERELLRDPTAHAEVLALREAASSRADWNLEGCTLVVTL 74 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP---EIYPGISEQRS 137 EPC MCA AI AR+ + +GA + K G Y + P E+Y G+ + Sbjct: 75 EPCAMCAGAILGARVTTVVFGAWDEKAGA---AGSLYDILRDRRLPARSEVYAGVLAEEC 131 Query: 138 RQIIQDFFKERR 149 R ++ FF+ +R Sbjct: 132 RALLLAFFEAKR 143 >gi|313680072|ref|YP_004057811.1| tRNA(ile)-lysidine synthetase [Oceanithermus profundus DSM 14977] gi|313152787|gb|ADR36638.1| tRNA(Ile)-lysidine synthetase [Oceanithermus profundus DSM 14977] Length = 522 Score = 72.0 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 7/127 (5%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+P+GAV V + + + N + TAHAE+LA+R +++LP LYVTLEP Sbjct: 399 EVPIGAVVVREGEELGASANAVEARVNATAHAELLALRAAQERAGEKVLPGATLYVTLEP 458 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MC A+ AR+ R+ + NPK G + T S E+ G + S +++ Sbjct: 459 CPMCLGALIEARVGRVVWATENPKAGAV-------TRYGMDASLELEGGRLARESAMLLK 511 Query: 143 DFFKERR 149 FF + R Sbjct: 512 GFFADLR 518 >gi|111220122|ref|YP_710916.1| tRNA-specific adenosine deaminase [Frankia alni ACN14a] gi|111147654|emb|CAJ59309.1| tRNA-specific adenosine deaminase [Frankia alni ACN14a] Length = 163 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 74/143 (51%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66 M AL +A+ A ++PVGAV V + AG RE D TAHAE+LA+R + Sbjct: 16 MGLALAQARLAPEHGDVPVGAVVVGPEGTVLGAGRNTRERDGDPTAHAEVLALRAAAARV 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA A+ LAR+ RL YGA + K G + + +H P Sbjct: 76 GSWRLSGATLVVTLEPCTMCAGALVLARVDRLVYGAVDDKAGAVGSLWDVVRDRRLNHRP 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ ++ DFF RR Sbjct: 136 EVISGVRAAECATLLADFFTARR 158 >gi|88812724|ref|ZP_01127970.1| guanine deaminase [Nitrococcus mobilis Nb-231] gi|88789962|gb|EAR21083.1| guanine deaminase [Nitrococcus mobilis Nb-231] Length = 156 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 48/92 (52%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + +++ NR D TAHAE++AIR CRIL L + +Y + EPC Sbjct: 25 PFGAVIVHDGCVVAEGWNRVWSAMDPTAHAEVVAIRRACRILETYQLADCSIYTSCEPCP 84 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC AI AR++ +YY + I F Sbjct: 85 MCLGAIYWARLQVIYYANTRDDAAAIGFDDSF 116 >gi|123966234|ref|YP_001011315.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9515] gi|123200600|gb|ABM72208.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9515] Length = 165 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 1/128 (0%) Query: 23 EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+P+ A + + I R N+ D HAE++A+R I + E + V LE Sbjct: 35 ELPITAFIIDERGRCIGRGSNKRETNNDPLGHAELIALRQASWIKNDWRFNECSIIVNLE 94 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PCTMCAAA+ AR+ + YGA + K GG + HH + GI ++ I Sbjct: 95 PCTMCAAALVQARMGNVIYGAEDHKRGGFGGTIDLSKHESAHHKMNVIRGILDKDCENRI 154 Query: 142 QDFFKERR 149 + +FK+ R Sbjct: 155 KIWFKKLR 162 >gi|308272592|emb|CBX29196.1| hypothetical protein N47_J01770 [uncultured Desulfobacterium sp.] Length = 172 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/144 (34%), Positives = 73/144 (50%), Gaps = 6/144 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIIS---RAGNRNRELKDVTAHAEILAIR--M 61 FM AL AQ A + E PVG V V +KII+ R G L +V HAEI+A+R Sbjct: 8 FMEKALNLAQTALEQGEFPVGCVLVHKDKIIATGKREGTAKSVLNEVD-HAEIIALRNLA 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G + ++ E+ +Y T+EPC MC AI LA I ++ + + GGG T+ + Sbjct: 67 GMKDYNEISRQEIIIYCTMEPCLMCFGAILLAGIGKIVFAYEDVMGGGTNCNTKDLSPLY 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 + I PG+ + S I + +F Sbjct: 127 KDNKISITPGVLRKESLNIFKMYF 150 >gi|260549627|ref|ZP_05823845.1| guanine deaminase [Acinetobacter sp. RUH2624] gi|260407420|gb|EEX00895.1| guanine deaminase [Acinetobacter sp. RUH2624] Length = 160 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK+ +F+ ALE A + + P GAV V + K+I+ N+ D TAHAE+LAIR Sbjct: 1 MKENQMFLRQALELAYHNVEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 ++L L ++ + PC MC AA+ LA I+ ++Y SN G Sbjct: 61 AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVHYAYSNEDG 107 >gi|124009723|ref|ZP_01694394.1| guanine deaminase [Microscilla marina ATCC 23134] gi|123984327|gb|EAY24671.1| guanine deaminase [Microscilla marina ATCC 23134] Length = 158 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 49/86 (56%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V N +II+ NR +D TAHAE++AIR C++L+ L + +Y + EPC Sbjct: 27 PFGAVVVKNGEIIAEGHNRVTSTQDPTAHAEVVAIREACKVLNTFQLDDCVIYTSCEPCP 86 Query: 85 MCAAAISLARIRRLYYGASNPKGGGI 110 MC AI AR + +YY + I Sbjct: 87 MCLGAIYWARPKAVYYACNREDAAHI 112 >gi|291244202|ref|XP_002741990.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Saccoglossus kowalevskii] Length = 209 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 8/148 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63 +M +L+ A +A E+PVG + V +++I + N E ++ T HAE++AI C Sbjct: 15 WMEKSLDMAHDALFNGEVPVGCLMVYKDEVIGKGRNCVNETRNATRHAEMVAIDEVIGWC 74 Query: 64 RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +Q + + LYVT+EPC MCA A+ L + + YG SN + GG + + Sbjct: 75 EKSNQVKEAVFSKTVLYVTVEPCIMCAGALRLLHVPLVVYGCSNERFGGCGSVLNVHKDD 134 Query: 121 TCHHSP--EIYPGISEQRSRQIIQDFFK 146 +H + GI + + +++DF+K Sbjct: 135 IDNHGKPFKCISGIFAEEAIALLKDFYK 162 >gi|75764881|ref|ZP_00744241.1| Cytosine deaminase family [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74487631|gb|EAO51487.1| Cytosine deaminase family [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 104 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 33/79 (41%), Positives = 47/79 (59%) Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H E+ Sbjct: 11 LEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQCEVVT 70 Query: 131 GISEQRSRQIIQDFFKERR 149 G+ E+ ++ +FF+E R Sbjct: 71 GVLEEECGTLLTNFFRELR 89 >gi|118586582|ref|ZP_01544023.1| cytidine/deoxycytidylate deaminase [Oenococcus oeni ATCC BAA-1163] gi|118432961|gb|EAV39686.1| cytidine/deoxycytidylate deaminase [Oenococcus oeni ATCC BAA-1163] Length = 157 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 2/103 (1%) Query: 5 NVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +V+M A+E+A +N L+ P GAV V + ++I A N D TAHAEI+AIR C Sbjct: 4 SVYMKLAIEQANENIVLKEGGPFGAVIVRDQEVICAAHNMVLANLDPTAHAEIIAIRKAC 63 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 ++L+ L + LY + PC MC +A A I+ + YG + PK Sbjct: 64 KVLATRDLSDCTLYTSAYPCPMCLSATIWANIKEVRYG-NTPK 105 >gi|159906167|ref|YP_001549829.1| CMP/dCMP deaminase zinc-binding [Methanococcus maripaludis C6] gi|159887660|gb|ABX02597.1| CMP/dCMP deaminase zinc-binding [Methanococcus maripaludis C6] Length = 145 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 18/144 (12%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA+ IP+GAV V NKII R NR + HAE+ A+ R L Sbjct: 4 FMEEAIKEAKLGLEEGGIPIGAVLVYKNKIIGRGHNRRVQTNSAILHAEMDALENAGR-L 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTLATC 122 + +I +LY TL PC MC+ A+ L +I+++ G + G I+NG L Sbjct: 63 TSDIYKNCELYTTLSPCIMCSGAVLLYKIKKVVIGENKTFLGAEDLLIKNGVSVEVL--- 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFK 146 +++R ++++DF K Sbjct: 120 ----------NDERCVKMMEDFIK 133 >gi|12060484|dbj|BAB20627.1| hypothetical protein [Thermosynechococcus elongatus] Length = 105 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/92 (45%), Positives = 55/92 (59%), Gaps = 1/92 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + +M A+ A+ A +E+PVGAV V N++I+ NR + D TAHAEI+A+R Sbjct: 14 DFWMQQAIALAEQAGAADEVPVGAVIVSAENELIATGENRRQRDHDPTAHAEIIALRRAG 73 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 + L L LYVTLEPC MCA AI ARI Sbjct: 74 QRLGTWYLTGCRLYVTLEPCPMCAGAIVQARI 105 >gi|319441800|ref|ZP_07990956.1| putative cytosine/adenosine deaminase [Corynebacterium variabile DSM 44702] Length = 167 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 6/145 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ ALE A + ++PVGAV + ++ A NR D TAHAE+LA+R Sbjct: 26 MARALEVAASTP-DGDVPVGAVVYAPDGTELAAATNRREADADPTAHAEVLALRAATAAH 84 Query: 67 SQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTLATCHH 124 L + L VTLEPC MCA A+ AR+R + +GA P+ G G+ F + H Sbjct: 85 GDAWRLTDCTLVVTLEPCAMCAGAMVGARVRTVVFGAWEPRTGAC--GSVFDVARESPLH 142 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + E+ G+ ++++FF RR Sbjct: 143 AVEVRGGVLLDECEDLVREFFSSRR 167 >gi|87124293|ref|ZP_01080142.1| putative cytidine/deoxycytidylate deaminase [Synechococcus sp. RS9917] gi|86167865|gb|EAQ69123.1| putative cytidine/deoxycytidylate deaminase [Synechococcus sp. RS9917] Length = 147 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M L A E+PV AV + + I GNR +D HAE++A+ ++ Sbjct: 1 MGRLLRRADQLGREGEVPVCAVILDGLGRCIGYGGNRRERQRDPLGHAELVALGQASQLR 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L VTLEPC MCA A+ AR+ ++ + A + K G + + + HH Sbjct: 61 QDWRFNDCTLLVTLEPCPMCAGALVQARMGQVIFAAWDSKRGALGSTIDLSQHRSAHHHM 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E +R ++ +F++RR Sbjct: 121 RVVGGVMEPEARTRLEAWFRQRR 143 >gi|154487580|ref|ZP_02028987.1| hypothetical protein BIFADO_01437 [Bifidobacterium adolescentis L2-32] gi|154083709|gb|EDN82754.1| hypothetical protein BIFADO_01437 [Bifidobacterium adolescentis L2-32] Length = 149 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV + + + I R N D AHAE+ A+R L L + L VTL Sbjct: 21 GEVPVGAVVLDADGRAIGRGRNLRETHADPLAHAEVQAMREAAASLGTWNLADCTLVVTL 80 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A + R+ +GA + K G + PE+ G+ E ++ Sbjct: 81 EPCPMCAGACLQTHVGRIVFGAWDAKLGACGSVWDIPRDPHVGPVPEVVGGVCEAECGRL 140 Query: 141 IQDFFKERR 149 + DFF +RR Sbjct: 141 MTDFFADRR 149 >gi|17554608|ref|NP_498663.1| hypothetical protein R13A5.10 [Caenorhabditis elegans] gi|15144367|gb|AAK84461.1|AC006679_2 Hypothetical protein R13A5.10 [Caenorhabditis elegans] Length = 153 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 1/110 (0%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A+EEA+ + + P GAV V + K+I N KD TAHAE+ AIR C+ Sbjct: 3 FMKLAIEEAKKGMEKGDGGPFGAVIVKDGKVIGSGHNMVLVTKDPTAHAEVTAIRNTCKN 62 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + L LY + PC MC A +R+ +YYGA++ I G Sbjct: 63 VDNFDLSGCQLYTSCYPCPMCMGAALWSRVDAIYYGATSQDAANIGFGDH 112 >gi|268575234|ref|XP_002642596.1| Hypothetical protein CBG09150 [Caenorhabditis briggsae] gi|187032061|emb|CAP28830.1| hypothetical protein CBG_09150 [Caenorhabditis briggsae AF16] Length = 153 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 1/110 (0%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A+EEA+ + + P GAV V + K+I N KD TAHAE+ AIR C+ Sbjct: 3 FMKLAIEEAKKGMVAGDGGPFGAVIVKDGKVIGSGHNMVLVTKDPTAHAEVTAIRNTCKN 62 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + L LY + PC MC A +R+ +YYGA++ + I G Sbjct: 63 VDSFDLSGCQLYTSCYPCPMCMGAALWSRVDAIYYGATSSEAAEIGFGDH 112 >gi|315305704|ref|ZP_07875310.1| tRNA-specific adenosine deaminase [Listeria ivanovii FSL F6-596] gi|313625927|gb|EFR95453.1| tRNA-specific adenosine deaminase [Listeria ivanovii FSL F6-596] Length = 84 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/79 (48%), Positives = 48/79 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ A E+P+GAV VL+ KII RA N ++ HAE+LAI+ C Sbjct: 6 FMQQALEEAEKAREIGEVPIGAVVVLDGKIIGRAHNLRETSQNAVTHAELLAIQDACNYQ 65 Query: 67 SQEILPEVDLYVTLEPCTM 85 + L +LYVTLEPC M Sbjct: 66 NSWRLSGAELYVTLEPCPM 84 >gi|281351029|gb|EFB26613.1| hypothetical protein PANDA_000408 [Ailuropoda melanoleuca] Length = 158 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 9/138 (6%) Query: 19 ALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ------EIL 71 AL N E+PVG + V NN+++ + N + K+ T HAE++AI + E+ Sbjct: 4 ALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQALDWCHRSGKSPSEVF 63 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT--LATCHHSPEIY 129 LYVT+EPC MCAAA+ L +I + YG N + GG + + L + Sbjct: 64 EHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRPFKCI 123 Query: 130 PGISEQRSRQIIQDFFKE 147 PG + + ++++ F+K+ Sbjct: 124 PGYRAEEAVEMLKTFYKQ 141 >gi|332974309|gb|EGK11241.1| guanine deaminase [Desmospora sp. 8437] Length = 146 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 33/89 (37%), Positives = 53/89 (59%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74 A+N + P GAV V ++I+ N +++D TAHAEI AIR CR L + +L + Sbjct: 15 AENVSRHRGEPFGAVIVREGEVIATGVNETGKIQDPTAHAEIQAIREACRKLGKTVLDDC 74 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGAS 103 +++ + EPC+MC AI A R +++ A+ Sbjct: 75 EMFASGEPCSMCMGAIQWAGFRAVWFAAA 103 >gi|229551942|ref|ZP_04440667.1| guanine deaminase [Lactobacillus rhamnosus LMS2-1] gi|229314677|gb|EEN80650.1| guanine deaminase [Lactobacillus rhamnosus LMS2-1] Length = 167 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 1/96 (1%) Query: 7 FMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ A EEA+ N + P G V V N +++SRA NR D TAH EI AIR + Sbjct: 18 FMAMADEEAKANVNGSDGGPFGCVIVKNGQVVSRAHNRVLVDHDPTAHGEITAIRKAGQA 77 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 L L +LY + PC MC +AI A I+++YYG Sbjct: 78 LGTHDLSGCELYTSAMPCPMCLSAIIWANIKQVYYG 113 >gi|258508144|ref|YP_003170895.1| guanine deaminase [Lactobacillus rhamnosus GG] gi|258539359|ref|YP_003173858.1| guanine deaminase [Lactobacillus rhamnosus Lc 705] gi|257148071|emb|CAR87044.1| Guanine deaminase [Lactobacillus rhamnosus GG] gi|257151035|emb|CAR90007.1| Guanine deaminase [Lactobacillus rhamnosus Lc 705] gi|259649462|dbj|BAI41624.1| deaminase [Lactobacillus rhamnosus GG] Length = 155 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 1/96 (1%) Query: 7 FMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ A EEA+ N + P G V V N +++SRA NR D TAH EI AIR + Sbjct: 6 FMAMADEEAKANVNGSDGGPFGCVIVKNGQVVSRAHNRVLVDHDPTAHGEITAIRKAGQA 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 L L +LY + PC MC +AI A I+++YYG Sbjct: 66 LGTHDLSGCELYTSAMPCPMCLSAIIWANIKQVYYG 101 >gi|320354083|ref|YP_004195422.1| CMP/dCMP deaminase zinc-binding protein [Desulfobulbus propionicus DSM 2032] gi|320122585|gb|ADW18131.1| CMP/dCMP deaminase zinc-binding protein [Desulfobulbus propionicus DSM 2032] Length = 173 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 14/154 (9%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL---KDVTAHAEIL 57 M + FM+ ALEEA+ A E PVG V NN I++R G R+ + ++ HAE++ Sbjct: 2 MSEHEQFMAVALEEARLALAEGEFPVGCAMVANNGIVAR-GRRHNSIEGYRNEIDHAEVV 60 Query: 58 AIRMGCRILSQE---ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 +R R+++++ L V +Y T+EPC MC A + L+ IR + + GGG Sbjct: 61 TLR---RLIAEQPGLDLATVTVYTTMEPCLMCYATLLLSGIRSFVWAYEDVMGGG--ANL 115 Query: 115 QFYTLATCHHSPEIY--PGISEQRSRQIIQDFFK 146 Y L T + +++ + S ++ Q FF+ Sbjct: 116 PLYMLNTLYAQMQVHLIDRVLRTESLRLFQQFFR 149 >gi|294786275|ref|ZP_06751529.1| cytidine and deoxycytidylate deaminase family protein [Parascardovia denticolens F0305] gi|315225809|ref|ZP_07867597.1| cytidine and deoxycytidylate deaminase [Parascardovia denticolens DSM 10105] gi|294485108|gb|EFG32742.1| cytidine and deoxycytidylate deaminase family protein [Parascardovia denticolens F0305] gi|315119941|gb|EFT83073.1| cytidine and deoxycytidylate deaminase [Parascardovia denticolens DSM 10105] Length = 158 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ A +A+ A L ++PVGAV V K+++++GN + K +HAEI ++ G Sbjct: 11 FMALAQAQARAAGLAGDVPVGAVLVDPQGKVLAQSGNGRQRGKGPLSHAEIEVMQAGAAA 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L VTLEPC MCA A A + R+ +GA + K G + Sbjct: 71 WGSWNLEGCTLVVTLEPCPMCAGAAVSAHLGRIVFGAWDQKMGACGSVWDIPRDPHIGFQ 130 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+ G+ E + ++ +FF+ RR Sbjct: 131 PEVVGGVGEAECQSLLTNFFRARR 154 >gi|291532926|emb|CBL06039.1| Cytosine/adenosine deaminases [Megamonas hypermegale ART12/1] Length = 157 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 40/98 (40%), Positives = 53/98 (54%), Gaps = 1/98 (1%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A +EA + NE P GAV V + KI+ R NR D T HAE+ AIR C+ Sbjct: 6 FMLIATQEADSNLTTNEGGPFGAVIVKDGKIVGRGHNRVLIKHDPTCHAEVEAIRDACQN 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L L +LY + PC MC +A A I+++YYG + Sbjct: 66 LGTHDLTGCELYTSCYPCPMCLSATIWANIKKVYYGNT 103 >gi|171741935|ref|ZP_02917742.1| hypothetical protein BIFDEN_01034 [Bifidobacterium dentium ATCC 27678] gi|306824050|ref|ZP_07457423.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) [Bifidobacterium dentium ATCC 27679] gi|309800761|ref|ZP_07694896.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bifidobacterium dentium JCVIHMP022] gi|171277549|gb|EDT45210.1| hypothetical protein BIFDEN_01034 [Bifidobacterium dentium ATCC 27678] gi|304552703|gb|EFM40617.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) [Bifidobacterium dentium ATCC 27679] gi|308222606|gb|EFO78883.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bifidobacterium dentium JCVIHMP022] Length = 151 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 3/130 (2%) Query: 22 NEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 E+PVGAV VL+ ++I R N +D AHAE+ A+ L L + L VT Sbjct: 21 GEVPVGAV-VLDAAGQVIGRGRNLREADRDPLAHAEVKAMTEAAHALGTWNLADCTLIVT 79 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA A I R+ +GA + K G + PE+ G+ E + Sbjct: 80 LEPCPMCAGACLQTHIGRIVFGAWDAKLGACGSVWDIPRDPHIGSVPEVIGGMHESECAR 139 Query: 140 IIQDFFKERR 149 I+ DFF ++R Sbjct: 140 ILTDFFTDKR 149 >gi|156387791|ref|XP_001634386.1| predicted protein [Nematostella vectensis] gi|156221468|gb|EDO42323.1| predicted protein [Nematostella vectensis] Length = 156 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 37/79 (46%), Positives = 44/79 (55%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +P GAV +NKII+ N + D TAHAE+ AIR C L L DLY + PC Sbjct: 26 MPFGAVIAKDNKIIAETANLSFVNCDPTAHAEVSAIRQACSALKSRDLTGCDLYTSCYPC 85 Query: 84 TMCAAAISLARIRRLYYGA 102 MC AAI A I R+YY A Sbjct: 86 AMCMAAIYWASISRVYYAA 104 >gi|308474568|ref|XP_003099505.1| hypothetical protein CRE_01142 [Caenorhabditis remanei] gi|308266694|gb|EFP10647.1| hypothetical protein CRE_01142 [Caenorhabditis remanei] Length = 153 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 1/110 (0%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A+EEA+ + + P GAV V + K+I N KD TAHAE+ AIR C+ Sbjct: 3 FMKLAIEEAKKGMAKGDGGPFGAVIVKDGKVIGVGHNMVLVNKDPTAHAEVTAIRDACKN 62 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + L LY + PC MC A +R+ +YYGA++ I G Sbjct: 63 VDNFDLSGCQLYTSCYPCPMCMGAALWSRVDAVYYGATSEDAASIGFGDH 112 >gi|312219914|emb|CBX99856.1| hypothetical protein [Leptosphaeria maculans] Length = 259 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 6/142 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ A+ A +E PVG V V + +II R N + T HAE +AI IL Sbjct: 62 FMREAIAMAELALKSDETPVGCVFVKDGEIIGRGMNETNRTLNGTRHAEFVAI---ASIL 118 Query: 67 SQE---ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 S+ IL E DLYVT+EPC MCA+ + I+ +Y+G N + GG + + Sbjct: 119 SKHPISILNETDLYVTVEPCVMCASMLRQYGIKAVYFGCWNERFGGTGGVLNVHCDPSVD 178 Query: 124 HSPEIYPGISEQRSRQIIQDFF 145 + GI + + +++ F+ Sbjct: 179 KPYPVTGGIFREEAIMLLRKFY 200 >gi|295395473|ref|ZP_06805668.1| tRNA-specific adenosine deaminase [Brevibacterium mcbrellneri ATCC 49030] gi|294971644|gb|EFG47524.1| tRNA-specific adenosine deaminase [Brevibacterium mcbrellneri ATCC 49030] Length = 142 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 54/108 (50%) Query: 42 NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 NR D TAHAE++A+R L + L L VTLEPC MCA A AR+ + +G Sbjct: 35 NRREADGDPTAHAEVVALRAAASRLGRWRLDGATLVVTLEPCAMCAGAAVGARVDAIVFG 94 Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + K G + H P++Y G+ + ++++FF RR Sbjct: 95 AFDEKAGACGSQWDLPRDRGSLHRPQVYAGVMSVEAVHVLEEFFAARR 142 >gi|251798037|ref|YP_003012768.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2] gi|247545663|gb|ACT02682.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2] Length = 155 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 10/152 (6%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +FM A++ ++ A P GAV V N +I+ N+ D T HAE +R Sbjct: 1 MNQDEIFMREAIKLSKLAVEHGNEPFGAVLVKNGEIVYSNENQIYSATDPTFHAEAGLLR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN-------PKGGGIENG 113 C L E LY + EPC MC+ A+ R+ RL Y AS+ G +G Sbjct: 61 RFCAETHITDLREYTLYSSCEPCFMCSGAMVWTRLGRLVYAASDMDLCNLLDAKGSPCSG 120 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 F HH PE+ GI ++ S ++ D+F Sbjct: 121 IVF---KHSHHKPEVLGGILKEESLSVLADYF 149 >gi|283457044|ref|YP_003361608.1| tRNA-specific adenosine deaminase [Bifidobacterium dentium Bd1] gi|283103678|gb|ADB10784.1| MesJ tRNA-specific adenosine deaminase [Bifidobacterium dentium Bd1] Length = 145 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 3/130 (2%) Query: 22 NEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 E+PVGAV VL+ ++I R N +D AHAE+ A+ L L + L VT Sbjct: 15 GEVPVGAV-VLDAAGQVIGRGRNLREADRDPLAHAEVKAMTEAAHALGTWNLADCTLIVT 73 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA A I R+ +GA + K G + PE+ G+ E + Sbjct: 74 LEPCPMCAGACLQTHIGRIVFGAWDAKLGACGSVWDIPRDPHIGSVPEVIGGMHESECAR 133 Query: 140 IIQDFFKERR 149 I+ DFF ++R Sbjct: 134 ILTDFFTDKR 143 >gi|88803350|ref|ZP_01118876.1| guanine deaminase [Polaribacter irgensii 23-P] gi|88780916|gb|EAR12095.1| guanine deaminase [Polaribacter irgensii 23-P] Length = 157 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 1/104 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 MK+ FMS A++ A NE P G + V + II N+ D TAHAE+ AI Sbjct: 1 MKQHEEFMSAAVKAALKGMNNNEGGPFGCIIVKDGAIIGSGNNKVTSTNDPTAHAEVTAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 R C+ + L +Y + EPC MC AI AR ++YYG++ Sbjct: 61 RDACKNIGSFQLDGCIIYTSCEPCPMCLGAIYWARPDKVYYGSN 104 >gi|170782870|ref|YP_001711204.1| tRNA-specific adenosine deaminase [Clavibacter michiganensis subsp. sepedonicus] gi|169157440|emb|CAQ02629.1| tRNA-specific adenosine deaminase [Clavibacter michiganensis subsp. sepedonicus] Length = 158 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M+ AL+EA+ A + V +I R N +D TAHAE+ A+R Sbjct: 12 WMAVALDEARACAETGDVPVGAVVVDAAGVVIGRGRNLREARQDPTAHAEVEALRAAAEA 71 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L VTLEPC MCA AI AR+ R+ +GA + K G + H Sbjct: 72 TGDRHLVGATLVVTLEPCVMCAGAILAARVPRVVFGAWDEKAGAAGSLYDVLRDRRLPHR 131 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E++ G+ ++ DFF +RR Sbjct: 132 AEVFAGVLAAECAAVLDDFFADRR 155 >gi|313683576|ref|YP_004061314.1| cmp/dcmp deaminase zinc-binding protein [Sulfuricurvum kujiense DSM 16994] gi|313156436|gb|ADR35114.1| CMP/dCMP deaminase zinc-binding protein [Sulfuricurvum kujiense DSM 16994] Length = 152 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 51/142 (35%), Positives = 72/142 (50%), Gaps = 5/142 (3%) Query: 5 NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 N +M+ A +EA NE P GA V N +I+ A N + D TAHAEI IR Sbjct: 2 NTWMAIARDEALKGMDSNEGGPFGAAIVRNGSLIAAAHNEVLKSNDPTAHAEINVIRKAS 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTLAT 121 L+ L + LY T PC MC AI ARI +YY ++ + GG ++ FYT+ T Sbjct: 62 EKLATYDLSDCVLYTTCYPCPMCLGAILWARIPTVYYASTMDDAARGGFDD-KAFYTMIT 120 Query: 122 CHHSP-EIYPGISEQRSRQIIQ 142 S +++P SE+ +R + Sbjct: 121 DPKSVLDLHPLDSEEGNRLFFR 142 >gi|325298986|ref|YP_004258903.1| Guanine deaminase [Bacteroides salanitronis DSM 18170] gi|324318539|gb|ADY36430.1| Guanine deaminase [Bacteroides salanitronis DSM 18170] Length = 155 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 36/77 (46%), Positives = 43/77 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV N +IIS NR D TAHAE+ AIR CR L L ++Y + EPC Sbjct: 24 PFGAVIARNGEIISTGTNRVTPDHDPTAHAEVSAIRAACRELGTFDLSGCEIYTSCEPCP 83 Query: 85 MCAAAISLARIRRLYYG 101 MC AI A + R+YYG Sbjct: 84 MCLGAIYWAHLDRMYYG 100 >gi|224130724|ref|XP_002328360.1| predicted protein [Populus trichocarpa] gi|222838075|gb|EEE76440.1| predicted protein [Populus trichocarpa] Length = 184 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 1/95 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F++ A+EEA + + P GAV V N++II N + D TAHAE+ A+R C+ Sbjct: 32 FLTRAVEEAYKGVECGDGGPFGAVVVQNDEIIMSCHNMVLKNTDPTAHAEVTAVREACKK 91 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L++ L + ++Y + EPC MC AI L+R++RL Y Sbjct: 92 LNRIELSDCEIYASCEPCPMCFGAIHLSRVKRLVY 126 >gi|145345338|ref|XP_001417171.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577398|gb|ABO95464.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 170 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 16/158 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A +A + E+P+ AV V ++++ A NR D TAHAE+L IR+G Sbjct: 1 MRRALALALDAGSQGEVPIAAVLVDATTGEVVAEAANRCERDGDPTAHAEMLLIRLGAEK 60 Query: 66 LS-QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN-----------G 113 L L +YVTLEPC MCA AI +R+ + YGA N G + G Sbjct: 61 LGGWRHLKRTRMYVTLEPCAMCAGAILQSRVGGVTYGARNALLGADGSWAALLRNEDVGG 120 Query: 114 TQFYTLATCHHSP--EIYPGISEQRSRQIIQDFFKERR 149 ++ + +P ++ G+ + + + +++FF+ RR Sbjct: 121 SERAPVRAHPFTPDLDVKGGVLAEETGEAMREFFRRRR 158 >gi|326519634|dbj|BAK00190.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 154 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 43/98 (43%), Positives = 60/98 (61%), Gaps = 1/98 (1%) Query: 7 FMSCALEEAQNAALRNE-IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+S A+EEA A R P GAV V N+K++ N + D TAHAE+ AIR C+ Sbjct: 14 FLSIAVEEAYRAVDRGHGRPFGAVVVRNDKVVVSCHNMVVKNTDATAHAEVTAIREACKK 73 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L + L + ++Y + EPC MC A+ L+RI+RL YGA+ Sbjct: 74 LGKTDLSDCEMYASCEPCPMCFGAVRLSRIKRLVYGAT 111 >gi|305680082|ref|ZP_07402892.1| cytidine and deoxycytidylate deaminase zinc-binding region [Corynebacterium matruchotii ATCC 14266] gi|305660702|gb|EFM50199.1| cytidine and deoxycytidylate deaminase zinc-binding region [Corynebacterium matruchotii ATCC 14266] Length = 147 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 2/130 (1%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79 ++PVGAV + +I R NR D TAHAEI+AIR R L + + VT Sbjct: 18 GDVPVGAVIFDPDGNVIGRGSNRREADGDPTAHAEIIAIREAVRNFHDGWRLTDCTIAVT 77 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA A+ ARI + +GA PK G + + P++ G+ Sbjct: 78 LEPCCMCAGALVAARIGTIIFGAYEPKMGACGSVFDVVRDPQVLYQPQVIGGVLADECAA 137 Query: 140 IIQDFFKERR 149 + FF+E R Sbjct: 138 QLGVFFQECR 147 >gi|300711978|ref|YP_003737792.1| cytosine deaminase [Halalkalicoccus jeotgali B3] gi|299125661|gb|ADJ16000.1| cytosine deaminase [Halalkalicoccus jeotgali B3] Length = 280 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 51/100 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E A+ AA R + P G+V V + +I+ NR D+ H E+ R+ R L Sbjct: 141 FMRRAIELAREAAERGDNPFGSVLVHDGEIVMEDSNRVATEDDIRRHPELTLARLAVREL 200 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 EI E +Y + EPC MCA + A R+ Y S P+ Sbjct: 201 DPEIRSETTMYTSTEPCPMCAGGMVYAGFDRVVYATSGPE 240 >gi|58268162|ref|XP_571237.1| tRNA specific adenosine deaminase [Cryptococcus neoformans var. neoformans JEC21] gi|134113420|ref|XP_774735.1| hypothetical protein CNBF4140 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257379|gb|EAL20088.1| hypothetical protein CNBF4140 [Cryptococcus neoformans var. neoformans B-3501A] gi|57227472|gb|AAW43930.1| tRNA specific adenosine deaminase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 239 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 5/104 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ A +E+PVG V V + I+RA NR E ++ T HAE+ AI +L Sbjct: 1 MREALIMAEEALTNDEVPVGCVFVKGGQAIARARNRTNEWRNATLHAELEAID---HLLP 57 Query: 68 QEILP--EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 P + LYVT+EPC MCA+A+ I R+ YG N + GG Sbjct: 58 SHPAPLSTITLYVTVEPCVMCASALRQVGIGRVVYGCGNDRFGG 101 >gi|282163607|ref|YP_003355992.1| putative deaminase [Methanocella paludicola SANAE] gi|282155921|dbj|BAI61009.1| putative deaminase [Methanocella paludicola SANAE] Length = 154 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 51/96 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+E+A+ ++P GA V + K++ A N K++TAHAEI I C + Sbjct: 6 YMRLAIEKAREGVRHGQLPFGACIVKDGKVVGCAHNTILRDKNLTAHAEINTIHEACHVF 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L +Y T EPC MC A+ LA I R+ YGA Sbjct: 66 DSLDLSGCTIYCTCEPCPMCLGALGLANIDRIVYGA 101 >gi|320534251|ref|ZP_08034764.1| cytidine and deoxycytidylate deaminase zinc-binding region [Actinomyces sp. oral taxon 171 str. F0337] gi|320133534|gb|EFW25969.1| cytidine and deoxycytidylate deaminase zinc-binding region [Actinomyces sp. oral taxon 171 str. F0337] Length = 108 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 42/101 (41%), Positives = 54/101 (53%) Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 D TAHAEI A+R L L L VTLEPCTMCA AI LAR+ RL GA P+ G Sbjct: 8 DPTAHAEIRALRAAGAALGDSHLDGCTLVVTLEPCTMCAGAIVLARVARLVLGAWEPRTG 67 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +H E+ G+ Q+S+ ++ FF +RR Sbjct: 68 ACGSVRDVVRDTRSNHQVEVRAGLRAQQSQDLLTAFFADRR 108 >gi|225020161|ref|ZP_03709353.1| hypothetical protein CORMATOL_00161 [Corynebacterium matruchotii ATCC 33806] gi|224947126|gb|EEG28335.1| hypothetical protein CORMATOL_00161 [Corynebacterium matruchotii ATCC 33806] Length = 158 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 2/130 (1%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79 ++PVGAV + +I R NR D TAHAEI+AIR R L + + VT Sbjct: 29 GDVPVGAVIFDPDGNVIGRGSNRREADGDPTAHAEIIAIREAVRNFHDGWRLTDCTIAVT 88 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA A+ ARI + +GA PK G + + P++ G+ Sbjct: 89 LEPCCMCAGALVAARIGTIIFGAYEPKMGACGSVFDVVRDPQVLYQPQVIGGVLADECAA 148 Query: 140 IIQDFFKERR 149 + FF+E R Sbjct: 149 QLGVFFQECR 158 >gi|307209295|gb|EFN86380.1| tRNA-specific adenosine deaminase 2 [Harpegnathos saltator] Length = 175 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 12/148 (8%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL++A+ + E+PVG + V NN+ I+ N E + T HAEI I R Sbjct: 6 WMDAALQKAEESLREGEVPVGCLFVYNNEAIATGNNTVNETCNATRHAEINCIDQVLRFC 65 Query: 67 SQE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ + +D+ VT+EPC MC +A+ R+R + YG +N + GG + + Sbjct: 66 KEKQLEHETVFRNLDVIVTVEPCIMCVSALLQLRVRSIVYGCANDRFGGCTSVLEVPNF- 124 Query: 121 TCHHSPEIY--PGISEQRSRQIIQDFFK 146 + P+I + + +++++F+K Sbjct: 125 ---YDPKITIQGNVKADEAMKLLKNFYK 149 >gi|332028253|gb|EGI68300.1| tRNA-specific adenosine deaminase 2 [Acromyrmex echinatior] Length = 175 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 10/147 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL++A+ + E+PVG + + NN+II+ N E + T HAEI I + Sbjct: 6 WMDVALQKAEESLKAGEVPVGCLFIYNNQIIATGNNTVNETCNATRHAEINCIDQVLKFC 65 Query: 67 SQE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ + +D+ VT+EPC MC +A+ +I + YG +N + GG + Sbjct: 66 KEKSMDYEMVFRNLDVIVTVEPCIMCMSALLQLQIHSIVYGCANDRFGGC---ISVLEVP 122 Query: 121 TCHHSPEIYPG-ISEQRSRQIIQDFFK 146 + S I G + + + +++QDF+K Sbjct: 123 KFYDSKIIIQGNVKGEEAMRLLQDFYK 149 >gi|312885336|ref|ZP_07745000.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM 18603] gi|311302187|gb|EFQ79192.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM 18603] Length = 148 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 57/123 (46%), Gaps = 3/123 (2%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + +I+R+ NR D TAHAE+ AIR+ C+ L L +Y + EPC Sbjct: 17 PFGAVIVKDGMVIARSANRVVPQNDPTAHAEVSAIRLACQELQSFSLEGCVIYTSCEPCP 76 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTLATCHHSPEIYPGISEQRSRQIIQD 143 MC AI ARI +YY I +F Y C + P + Q R Q Sbjct: 77 MCLGAIYWARINEIYYANDKADAAAIGFDDKFIYEEMACSMADRKLPIV--QLMRDEAQG 134 Query: 144 FFK 146 FK Sbjct: 135 AFK 137 >gi|225055376|gb|ACN80662.1| Tsr4 [Streptomyces laurentii] Length = 142 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 1/128 (0%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PVGAV + + + G+ RE D TAHAE+LA+R + L L VTL Sbjct: 15 GDVPVGAVVLAPDGSVLATGHNEREATGDPTAHAEVLALRRAAAATGEWRLTGCTLVVTL 74 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A+ AR+ R+ +GA + K G + +H PE+ G+ E Sbjct: 75 EPCVMCAGALVQARVERVVFGAFDEKAGATGSLWDLVRDRRLNHRPEVIHGVLEAECSAQ 134 Query: 141 IQDFFKER 148 + FF+ R Sbjct: 135 LTAFFRTR 142 >gi|199598355|ref|ZP_03211775.1| Cytosine/adenosine deaminase [Lactobacillus rhamnosus HN001] gi|199590808|gb|EDY98894.1| Cytosine/adenosine deaminase [Lactobacillus rhamnosus HN001] Length = 155 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 1/96 (1%) Query: 7 FMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ A EEA+ N + P G V V N ++ISRA N+ D TAH EI AIR + Sbjct: 6 FMAMADEEAKANVNGSDGGPFGCVIVKNGQVISRAHNQVLVDHDPTAHGEITAIRKAGQA 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 L L +LY + PC MC +AI A I+++YYG Sbjct: 66 LGTHDLSGCELYTSAMPCPMCLSAIIWANIKQVYYG 101 >gi|328463817|gb|EGF35361.1| guanine deaminase [Lactobacillus rhamnosus MTCC 5462] Length = 127 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 1/96 (1%) Query: 7 FMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ A EEA+ N + P G V V N ++ISRA N+ D TAH EI AIR + Sbjct: 6 FMAMANEEAKANVNGSDGGPFGCVIVKNGQVISRAHNQVLVDHDPTAHGEITAIRKAGQA 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 L L +LY + PC MC +AI A I+++YYG Sbjct: 66 LGTHDLSGCELYTSAMPCPMCLSAIIWANIKQVYYG 101 >gi|117925508|ref|YP_866125.1| CMP/dCMP deaminase, zinc-binding [Magnetococcus sp. MC-1] gi|117609264|gb|ABK44719.1| CMP/dCMP deaminase, zinc-binding protein [Magnetococcus sp. MC-1] Length = 150 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/144 (34%), Positives = 73/144 (50%), Gaps = 19/144 (13%) Query: 12 LEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 L +A +AA R E+PVGA + ++S AGN D AHAEI+A+R R LS Sbjct: 20 LVQATDAAARGEVPVGALIYAAQGWVVSMAGNGPIGAHDPMAHAEIVAMRCAARRLSNYR 79 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130 L + + V+LEPC +C A LAR++ + Y + G ENG P+I P Sbjct: 80 LSGLCMVVSLEPCPVCQQATGLARLQSVRYLTAQ----GAENG---------FVRPDITP 126 Query: 131 GISEQRS-----RQIIQDFFKERR 149 + E R+ +++ FF+ RR Sbjct: 127 PLQEDRAFMTAGEMMLKIFFEFRR 150 >gi|261855466|ref|YP_003262749.1| Guanine deaminase [Halothiobacillus neapolitanus c2] gi|261835935|gb|ACX95702.1| Guanine deaminase [Halothiobacillus neapolitanus c2] Length = 163 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/86 (39%), Positives = 48/86 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV N ++I+ N+ D TAHAE+ AIR C++L+ L ++Y + EPC Sbjct: 32 PFGAVISRNGEVIATGFNQVTSANDPTAHAEVSAIRAACQVLNTFDLSGCEIYTSCEPCP 91 Query: 85 MCAAAISLARIRRLYYGASNPKGGGI 110 MC +AI AR+ R+YY S I Sbjct: 92 MCLSAIYWARLDRIYYANSRQDAADI 117 >gi|307170830|gb|EFN62941.1| tRNA-specific adenosine deaminase 2 [Camponotus floridanus] Length = 171 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 18/151 (11%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL++A+ + E+PVG + + NN+II+ N E + T HAEI I + Sbjct: 6 WMDVALQKAEESLRAGEVPVGCLFIYNNEIIATGNNTVNETCNATRHAEINCIDQVLKFC 65 Query: 67 SQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFY 117 ++ L +D+ VT+EPC MC +A+ ++ + YG +N + GG + +FY Sbjct: 66 KEKCLQYETVFRNLDVVVTVEPCIMCISALLQLQVHSIIYGCANDRFGGCVSVLEVPKFY 125 Query: 118 TLATCHHSPE--IYPGISEQRSRQIIQDFFK 146 P+ I + ++++ ++++DF+K Sbjct: 126 -------DPKVLIQGNVKKEQAMKLLKDFYK 149 >gi|321260564|ref|XP_003195002.1| tRNA specific adenosine deaminase [Cryptococcus gattii WM276] gi|317461474|gb|ADV23215.1| tRNA specific adenosine deaminase, putative [Cryptococcus gattii WM276] Length = 239 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 5/104 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ A +E+PVG V V + I+RA NR E ++ T HAE+ AI +L Sbjct: 1 MREALIMAEEALSNDEVPVGCVFVKGGQAIARARNRTNEWRNATLHAELEAID---HLLP 57 Query: 68 QEILP--EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 P + LYVT+EPC MCA+A+ I R+ YG N + GG Sbjct: 58 SHPAPLSTITLYVTVEPCVMCASALRQVGIGRVVYGCGNDRFGG 101 >gi|307108051|gb|EFN56292.1| hypothetical protein CHLNCDRAFT_144679 [Chlorella variabilis] Length = 250 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 6/104 (5%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI----RMGCRILSQEILPEVDLY 77 NE+PVG V V + +++ N+ E ++ T HAE +A+ + + PE LY Sbjct: 29 NEVPVGCVVVRDGAVVAAGSNKTNETRNGTRHAEFVAVDALLQQAGGDAAAARFPECHLY 88 Query: 78 VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 VT EPC MCA A+SL R + YG N K GG NG+ AT Sbjct: 89 VTCEPCIMCAGALSLLRFASVTYGCPNDKFGG--NGSILSVHAT 130 >gi|195143831|ref|XP_002012900.1| GL23678 [Drosophila persimilis] gi|194101843|gb|EDW23886.1| GL23678 [Drosophila persimilis] Length = 160 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 9/146 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL---AIRMGC 63 FM AL EA+ A E+PVG V V +K+++R N ++ T HAE + AI C Sbjct: 4 FMEEALMEARRARDAGEVPVGCVFVHEDKVVARGANEVNVSRNATRHAEFICIDAILAYC 63 Query: 64 R---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + ++++ E+ + VT+EPC MC+AA+ ++ + +G N + GG T A Sbjct: 64 REKNLPARQMFSEIIVVVTVEPCIMCSAALHTLGVQEIIFGCENDRFGG---KTVVNVGA 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 +I G+ + ++++F+K Sbjct: 121 VVGKKIKITGGVRGDEAMALLKEFYK 146 >gi|167041893|gb|ABZ06633.1| putative cytidine and deoxycytidylate deaminase zinc-binding region [uncultured marine microorganism HF4000_133G03] Length = 149 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/87 (40%), Positives = 48/87 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P G+V V + KII+ N+ D TAH EI+AIR C+ L+ L +LY T EPC Sbjct: 18 PFGSVIVKDEKIIAEGFNKVTSTNDPTAHGEIVAIRKACKSLNNFNLSGCELYSTCEPCP 77 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIE 111 MC +AI A I ++YY + I+ Sbjct: 78 MCLSAIYWAHIDKVYYANTRDDAKKID 104 >gi|198451012|ref|XP_001358211.2| GA18791 [Drosophila pseudoobscura pseudoobscura] gi|198131295|gb|EAL27348.2| GA18791 [Drosophila pseudoobscura pseudoobscura] Length = 160 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 9/146 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL---AIRMGC 63 FM AL EA+ A E+PVG V V +K+++R N ++ T HAE + AI C Sbjct: 4 FMEEALMEARRARDAGEVPVGCVFVHEDKVVARGANEVNVSRNATRHAEFICIDAILAYC 63 Query: 64 R---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + ++++ E+ + VT+EPC MC+AA+ ++ + +G N + GG T A Sbjct: 64 REKNLPARQMFSEIIVVVTVEPCIMCSAALHTLGVQEIIFGCENDRFGG---KTVVNVGA 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 +I G+ + ++++F+K Sbjct: 121 VVGKKIKITGGVRGDEAMALLKEFYK 146 >gi|188994253|ref|YP_001928505.1| putative cytidine/deoxycytidylate deaminase [Porphyromonas gingivalis ATCC 33277] gi|188593933|dbj|BAG32908.1| putative cytidine/deoxycytidylate deaminase [Porphyromonas gingivalis ATCC 33277] Length = 159 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 47/92 (51%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + +II+ NR D TAHAE+ IRM C+ L L +Y + EPC Sbjct: 28 PFGAVIVKDGEIIAATSNRVTLDNDPTAHAEVNCIRMACKRLGTFDLSGCTIYTSCEPCP 87 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC AI ARI R++YG + I F Sbjct: 88 MCLGAIYWARIDRIFYGNNRQDAADIGFDDDF 119 >gi|47207020|emb|CAF91477.1| unnamed protein product [Tetraodon nigroviridis] Length = 161 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 6/108 (5%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR------M 61 M A + A++A E+PVG + V NN+++ R N E K+ T HAE++A+ Sbjct: 1 MDEAFDMAKDALQNGEVPVGCLMVYNNEVVGRGRNEVNETKNATRHAEMVALDELLNWCH 60 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 + ++ + LYVT+EPC MCAAA+ L I + YG N + GG Sbjct: 61 HSNLDVSKVSRKTVLYVTVEPCVMCAAALRLLNIALVVYGCRNERFGG 108 >gi|262372745|ref|ZP_06066024.1| guanine deaminase (Guanase) (guanine aminase) (guanine aminohydrolase) (GAH) (GDEase) [Acinetobacter junii SH205] gi|262312770|gb|EEY93855.1| guanine deaminase (Guanase) (guanine aminase) (guanine aminohydrolase) (GAH) (GDEase) [Acinetobacter junii SH205] Length = 151 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/98 (38%), Positives = 57/98 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A++ A R P A+ V NN+IIS N+ + D TAHAE+LA+R R+L Sbjct: 6 FIQQAVDLALENVKRGGRPFAALVVKNNEIISTGVNQIKLTNDPTAHAELLALREAGRLL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 S L + +Y + +PC MC AAI +A I ++++ SN Sbjct: 66 STPNLEDCTVYASGQPCPMCLAAIRMAGISKVFFAFSN 103 >gi|227355507|ref|ZP_03839902.1| guanine deaminase [Proteus mirabilis ATCC 29906] gi|227164303|gb|EEI49192.1| guanine deaminase [Proteus mirabilis ATCC 29906] Length = 153 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 7/118 (5%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V N ++I+ A N+ D TAHAE+LA+R ++L + L + +Y + +PC Sbjct: 24 PFGAVIVKNGQVIAHAVNQITATNDPTAHAELLALREAGKVLGRAKLDDCVVYASGQPCP 83 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 MC AA+ +A I +++Y SN + Q Y L+T + + + +Q Q +Q Sbjct: 84 MCLAAMRMAGISQIFYAYSN-------DDAQPYGLSTANIAKALRVAPEQQEGLQFVQ 134 >gi|171909718|ref|ZP_02925188.1| CMP/dCMP deaminase, zinc-binding protein [Verrucomicrobium spinosum DSM 4136] Length = 169 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 4/100 (4%) Query: 12 LEEAQNAALRNEI----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 L+EA + A+ N P GAV V ++ISR N D TAHAE+LA+R ++L Sbjct: 17 LQEAIDLAVANISEGGRPFGAVVVKYGRVISRGVNETHLSNDPTAHAEMLAVRAASQVLQ 76 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 +L LY + PC MC AA+ +A + ++Y +NP+ Sbjct: 77 SPLLESCTLYASGHPCPMCLAAMRMAGVTDVFYAFTNPEA 116 >gi|170032967|ref|XP_001844351.1| tRNA-specific adenosine deaminase subunit TAD2 [Culex quinquefasciatus] gi|167873308|gb|EDS36691.1| tRNA-specific adenosine deaminase subunit TAD2 [Culex quinquefasciatus] Length = 165 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 7/147 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALE+A+ A E+PVG V V ++II+ NR E K+ T H E L I Sbjct: 4 FMEQALEQARLAEQLKEVPVGCVFVRGQDEIIANGCNRVNETKNATRHVEFLCIDQSLEY 63 Query: 66 LSQEILPEVDLY------VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 Q +P DL+ VT+EPC MCA A+ +R + YG N + GG L Sbjct: 64 ARQRDIPWEDLFREVTVVVTVEPCIMCAGALLQLGVREIIYGCGNDRFGGCGTVLDVPGL 123 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146 S I G+ + + Q++++F+K Sbjct: 124 LLEKGSLPIRGGVRAEEAMQLLREFYK 150 >gi|237784829|ref|YP_002905534.1| putative cytosine/adenosine deaminase [Corynebacterium kroppenstedtii DSM 44385] gi|237757741|gb|ACR16991.1| putative cytosine/adenosine deaminase [Corynebacterium kroppenstedtii DSM 44385] Length = 163 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 4/146 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL+ A+ ++PVGAV V + ++ N D TAHAE++A+R R Sbjct: 18 WMQMALDVAKRTP-PGDVPVGAVVVDASGHVVGEGCNERESTGDPTAHAEVIALRAAARE 76 Query: 66 LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY-TLATCH 123 + L L VTLEPC MCA A +RI + +GA PK G + A Sbjct: 77 VGDGWRLENHTLVVTLEPCVMCAGAAVTSRIGGIIFGAYEPKTGACGSVIDVVRDPAWPF 136 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 + ++ G+ E+ + ++++FF RR Sbjct: 137 PTVDVRGGVLERECQDLVEEFFARRR 162 >gi|34541357|ref|NP_905836.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas gingivalis W83] gi|34397674|gb|AAQ66735.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas gingivalis W83] Length = 150 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 47/92 (51%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + +II+ NR D TAHAE+ IRM C+ L L +Y + EPC Sbjct: 19 PFGAVIVKDGEIIAATSNRVTLDNDPTAHAEVNCIRMACKRLGTFDLSGCTIYTSCEPCP 78 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC AI ARI R++YG + I F Sbjct: 79 MCLGAIYWARIDRIFYGNNRQDAADIGFDDDF 110 >gi|119026595|ref|YP_910440.1| cytidine and deoxycytidylate deaminase [Bifidobacterium adolescentis ATCC 15703] gi|118766179|dbj|BAF40358.1| possible cytidine and deoxycytidylate deaminase [Bifidobacterium adolescentis ATCC 15703] Length = 157 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 60/129 (46%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV + + ++I R N D AHAE+ A+ L L + L VTL Sbjct: 29 GEVPVGAVVLAADGRVIGRGRNLRETHADPLAHAEVKAMAEAAASLDTWNLADCTLVVTL 88 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A I R+ +GA + K G + PE+ G+ E ++ Sbjct: 89 EPCPMCAGACLQTHIGRIVFGAWDAKLGACGSVWDIPRDPHVGLVPEVIGGVREAECGRL 148 Query: 141 IQDFFKERR 149 + DFF RR Sbjct: 149 MTDFFARRR 157 >gi|322783203|gb|EFZ10789.1| hypothetical protein SINV_01360 [Solenopsis invicta] Length = 175 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 77/148 (52%), Gaps = 12/148 (8%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC--- 63 +M+ AL++A+ + E+PVG + + NN++I+ N E + T HAEI I Sbjct: 6 WMNVALQKAEESLRAGEVPVGCLFIYNNEVIATGNNTVNETCNATRHAEINCIDQVLKFC 65 Query: 64 ---RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R+ + + +D+ VT+EPC MC +A+ ++ + YG +N + GG + + Sbjct: 66 KEKRVDYETVFRNLDVIVTVEPCIMCMSALLQLQVHSIVYGCANDRFGGCGSVLEVQKF- 124 Query: 121 TCHHSPEIY--PGISEQRSRQIIQDFFK 146 + P+I + + + +++QDF+K Sbjct: 125 ---YDPKIVIQGNVKGEEAMRLLQDFYK 149 >gi|312887290|ref|ZP_07746893.1| Guanine deaminase [Mucilaginibacter paludis DSM 18603] gi|311300248|gb|EFQ77314.1| Guanine deaminase [Mucilaginibacter paludis DSM 18603] Length = 170 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/77 (44%), Positives = 44/77 (57%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA+ V N K+I+ GN D TAHAE+ AIR C+ L L +Y + EPC Sbjct: 32 PFGAIIVKNGKVIACEGNTVTSSNDPTAHAEVNAIRAACQALKSPDLEGCIMYTSCEPCP 91 Query: 85 MCAAAISLARIRRLYYG 101 MC +AI A+I +YYG Sbjct: 92 MCTSAIYWAQINVVYYG 108 >gi|187924315|ref|YP_001895957.1| CMP/dCMP deaminase zinc-binding [Burkholderia phytofirmans PsJN] gi|187715509|gb|ACD16733.1| CMP/dCMP deaminase zinc-binding [Burkholderia phytofirmans PsJN] Length = 171 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 64/122 (52%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V ++I+ N D +AHAE+ A+R + + LP +LYVTLEPC Sbjct: 17 VPVGAVLVRGEEVIATGFNHPIGGHDPSAHAEMAALRAAAQAVENYRLPGCELYVTLEPC 76 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARI R+ +GA +PK G + + +H + G+ E ++ Sbjct: 77 LMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQLNHHTTVIGGVLENECGAALKS 136 Query: 144 FF 145 FF Sbjct: 137 FF 138 >gi|256826363|ref|YP_003150323.1| tRNA-adenosine deaminase [Kytococcus sedentarius DSM 20547] gi|256689756|gb|ACV07558.1| tRNA-adenosine deaminase [Kytococcus sedentarius DSM 20547] Length = 159 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++ AL + A ++PVGAV + ++I R NR D AHAE++A+R + Sbjct: 15 WIGHALRAGEQALAAGDVPVGAVVIGPGGQVIGRGWNRREAEGDPLAHAEVVAMRAAAAV 74 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L VTLEPC MCA AI ARI + +GA + K G + + H Sbjct: 75 RGGWRLEDCALAVTLEPCLMCAGAIGQARIPLVVFGAWDAKAGACGSVWDVLRDSAALHR 134 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ ++ + + DFF RR Sbjct: 135 AEVRGGVRQEDCGRTLGDFFVTRR 158 >gi|193076995|gb|ABO11743.2| CMP/dCMP deaminase zinc-binding [Acinetobacter baumannii ATCC 17978] Length = 160 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 57/107 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK F+ A+E A N + P GAV V + K+I+ N+ D TAHAE+LAIR Sbjct: 1 MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 + ++L L ++ + PC MC AA+ LA I+ + Y SN G Sbjct: 61 VASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDG 107 >gi|303276308|ref|XP_003057448.1| predicted protein [Micromonas pusilla CCMP1545] gi|226461800|gb|EEH59093.1| predicted protein [Micromonas pusilla CCMP1545] Length = 189 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 11/136 (8%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI----RMGCRILSQEILPEVDL 76 R E+PVG V VL+N+I++R NR E ++ T HAE AI + + L Sbjct: 25 RWEVPVGCVLVLDNEIVARGSNRTNERRNGTRHAEFEAIDALLAAHANDANAARFEDCVL 84 Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTLATCHHSPEIYP-- 130 YVT EPC MCA A+SL R + YG N K GG + +G + YP Sbjct: 85 YVTCEPCIMCAGALSLLGCRAVVYGCGNDKFGGNGSILSDGGDAAASNGARGARRTYPSV 144 Query: 131 -GISEQRSRQIIQDFF 145 G+ + + ++++ F+ Sbjct: 145 GGLFAEDAVELLRRFY 160 >gi|259506366|ref|ZP_05749268.1| guanine deaminase [Corynebacterium efficiens YS-314] gi|259166044|gb|EEW50598.1| guanine deaminase [Corynebacterium efficiens YS-314] Length = 155 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 7/127 (5%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV ++II+ A N KD T HAEI+AIR R+L L +LYV +PC Sbjct: 24 PFGAVIARGDRIIAEAYNTVLATKDPTNHAEIVAIRSAARVLGTVDLTGCELYVNAQPCP 83 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT-CHHSPEI----YPGISEQRSRQ 139 MCA A+ AR+ R+Y+ + + I G + T + +P+ + + ++R+R+ Sbjct: 84 MCAGAVYWARLERVYFANTAAESARI--GFDDVRIDTELNRNPQDRGIPFEHVPDRRARE 141 Query: 140 IIQDFFK 146 + D+ + Sbjct: 142 VFDDWLR 148 >gi|83814096|ref|YP_445447.1| cytidine deaminase [Salinibacter ruber DSM 13855] gi|83755490|gb|ABC43603.1| probable cytidine deaminase [Salinibacter ruber DSM 13855] Length = 237 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/99 (40%), Positives = 50/99 (50%), Gaps = 1/99 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A+E A QN P A+ V + +I+ R N L D TAHAE+ AIR C Sbjct: 87 FLREAIEMAVQNVTTGQGGPFAALVVRDGEIVGRGTNVVTTLNDPTAHAEVTAIRRACDA 146 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L L LY T EPC MC A AR+ R+YY A+ Sbjct: 147 LDDFELAGCTLYATCEPCPMCLGAAYWARLDRVYYAATQ 185 >gi|25027973|ref|NP_738027.1| hypothetical protein CE1417 [Corynebacterium efficiens YS-314] gi|23493256|dbj|BAC18227.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 157 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 7/127 (5%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV ++II+ A N KD T HAEI+AIR R+L L +LYV +PC Sbjct: 26 PFGAVIARGDRIIAEAYNTVLATKDPTNHAEIVAIRSAARVLGTVDLTGCELYVNAQPCP 85 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT-CHHSPEI----YPGISEQRSRQ 139 MCA A+ AR+ R+Y+ + + I G + T + +P+ + + ++R+R+ Sbjct: 86 MCAGAVYWARLERVYFANTAAESARI--GFDDVRIDTELNRNPQDRGIPFEHVPDRRARE 143 Query: 140 IIQDFFK 146 + D+ + Sbjct: 144 VFDDWLR 150 >gi|224125580|ref|XP_002319621.1| predicted protein [Populus trichocarpa] gi|222857997|gb|EEE95544.1| predicted protein [Populus trichocarpa] Length = 186 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+S A+EEA + + P GAV V N++++ N + D TAHAE+ IR C+ Sbjct: 34 FLSRAVEEAYKGVECGDGGPFGAVVVRNDEVVMSCHNMVLKNTDPTAHAEVTVIREACKK 93 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L++ L + ++Y + EPC MC AI L+R++RL Y Sbjct: 94 LNRIELSDCEIYASCEPCPMCFGAIHLSRLKRLVY 128 >gi|294507332|ref|YP_003571390.1| cytidine deaminase [Salinibacter ruber M8] gi|294343661|emb|CBH24439.1| Probable cytidine deaminase [Salinibacter ruber M8] Length = 237 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/99 (40%), Positives = 50/99 (50%), Gaps = 1/99 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A+E A QN P A+ V + +I+ R N L D TAHAE+ AIR C Sbjct: 87 FLREAIEMAVQNVTTGQGGPFAALVVRDGEIVGRGTNVVTTLNDPTAHAEVTAIRRACDA 146 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L L LY T EPC MC A AR+ R+YY A+ Sbjct: 147 LDDFELAGCTLYATCEPCPMCLGAAYWARLDRVYYAATQ 185 >gi|255631480|gb|ACU16107.1| unknown [Glycine max] Length = 156 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/75 (44%), Positives = 47/75 (62%) Query: 28 AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCA 87 A+ V N++I++R N D TAHAE+ IR C L+Q L + ++Y + EPC MC Sbjct: 26 AIIVCNDEIVARCHNMVLRNTDPTAHAEVTVIRKACEKLNQIELSDCEIYASCEPCPMCF 85 Query: 88 AAISLARIRRLYYGA 102 AI L+R++RL YGA Sbjct: 86 GAIHLSRVKRLVYGA 100 >gi|126653720|ref|ZP_01725638.1| cytidine/deoxycytidylate deaminase family protein; probable guanine deaminase [Bacillus sp. B14905] gi|126589684|gb|EAZ83820.1| cytidine/deoxycytidylate deaminase family protein; probable guanine deaminase [Bacillus sp. B14905] Length = 132 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/100 (42%), Positives = 56/100 (56%), Gaps = 2/100 (2%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL+ A +NA + P GA+ V N +IIS N + D+T HAEI AIR C Sbjct: 6 FMRKALDLANENALSEHGAPFGALVVKNGQIISSGVNEVAKTNDLTNHAEIQAIRQACHT 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY-GASN 104 L L ++Y + EPC MC +AI A++ +YY ASN Sbjct: 66 LQTINLEGCEMYASTEPCPMCLSAIYYAKLTTVYYFHASN 105 >gi|326800631|ref|YP_004318450.1| Guanine deaminase [Sphingobacterium sp. 21] gi|326551395|gb|ADZ79780.1| Guanine deaminase [Sphingobacterium sp. 21] Length = 160 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 1/103 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 K +F+ A++ A +N+ P G + V + KII + N D TAHAEI+AIR Sbjct: 5 KDDIIFLKKAIDLAVTGVKQNKGGPFGCIIVKDGKIIGKGCNSVTSTIDPTAHAEIVAIR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 C+ L + L + LY + EPC MC AI AR R+ Y A+ Sbjct: 65 DACKHLGEYQLDDCTLYASCEPCPMCLGAIYWARPSRVVYAAT 107 >gi|308177840|ref|YP_003917246.1| nucleoside deaminase-like protein [Arthrobacter arilaitensis Re117] gi|307745303|emb|CBT76275.1| nucleoside deaminase-like protein [Arthrobacter arilaitensis Re117] Length = 156 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 48/92 (52%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV VL K+IS A N D TAHAEI AIR ++L L E +LY + EPC Sbjct: 25 PFGAVVVLEGKVISAACNSVVGSMDPTAHAEINAIRAAGQVLGSFDLSECELYTSCEPCP 84 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC AI +R + +Y+ + + I F Sbjct: 85 MCLGAIYWSRFKHVYFANNREEAAAIGFDDDF 116 >gi|220906868|ref|YP_002482179.1| CMP/dCMP deaminase [Cyanothece sp. PCC 7425] gi|219863479|gb|ACL43818.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7425] Length = 150 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 8/139 (5%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI- 70 LE A++A + + V A+ + ++I++ N+ + D+TAHAE++ +R LSQ Sbjct: 6 LELARSAIAQGKAGVAALMLWRDEILAFDHNQAVDTGDLTAHAEMVVLRQASSRLSQMSD 65 Query: 71 --LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG---GIENGTQFYTL-ATCHH 124 E+ LYVTLEPC MC +AIS A I+R+ Y A N G I +G + T Sbjct: 66 AEKAEITLYVTLEPCLMCLSAISFAGIKRVVYSALNRDGKPEIWISDGITTEEINETLVR 125 Query: 125 SP-EIYPGISEQRSRQIIQ 142 P E+ PG+ + + I+ Sbjct: 126 GPLELVPGVKREEGQAILD 144 >gi|38232870|ref|NP_938637.1| putative cytosine deaminase [Corynebacterium diphtheriae NCTC 13129] gi|38199128|emb|CAE48752.1| Putative cytosine deaminase [Corynebacterium diphtheriae] Length = 147 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80 +IPVGA+ + I+ R NR + HAEI+AI C L + L VTL Sbjct: 16 DIPVGAIIYGPDGTILGRGTNRRETDHNPLGHAEIMAITQACTQRGDGWRLTDCTLAVTL 75 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ +RI + +GA PK G + H+ ++ GI E ++ Sbjct: 76 EPCTMCAGALVGSRIGHIIFGAYEPKTGACGSAFDVVRDPAVLHTVQVRGGILEAECAEL 135 Query: 141 IQDFFKERR 149 + +FF R Sbjct: 136 MTNFFGGLR 144 >gi|169796435|ref|YP_001714228.1| guanine deaminase (Guanase) (guanine aminase) (guanine aminohydrolase) (GAH) (GDEase) [Acinetobacter baumannii AYE] gi|213156454|ref|YP_002318874.1| guanine deaminase [Acinetobacter baumannii AB0057] gi|215483897|ref|YP_002326122.1| Guanine deaminase(Guanase) [Acinetobacter baumannii AB307-0294] gi|301347084|ref|ZP_07227825.1| Guanine deaminase(Guanase) [Acinetobacter baumannii AB056] gi|301512279|ref|ZP_07237516.1| Guanine deaminase(Guanase) [Acinetobacter baumannii AB058] gi|301596132|ref|ZP_07241140.1| Guanine deaminase(Guanase) [Acinetobacter baumannii AB059] gi|332854738|ref|ZP_08435516.1| putative guanine deaminase [Acinetobacter baumannii 6013150] gi|332865718|ref|ZP_08436528.1| putative guanine deaminase [Acinetobacter baumannii 6013113] gi|169149362|emb|CAM87246.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) [Acinetobacter baumannii AYE] gi|213055614|gb|ACJ40516.1| guanine deaminase [Acinetobacter baumannii AB0057] gi|213986575|gb|ACJ56874.1| Guanine deaminase(Guanase) [Acinetobacter baumannii AB307-0294] gi|332727824|gb|EGJ59227.1| putative guanine deaminase [Acinetobacter baumannii 6013150] gi|332735145|gb|EGJ66227.1| putative guanine deaminase [Acinetobacter baumannii 6013113] Length = 160 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 56/107 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK F+ A+E A N + P GAV V + K+I+ N+ D TAHAE+LAIR Sbjct: 1 MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 ++L L ++ + PC MC AA+ LA I+ + Y SN G Sbjct: 61 TASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDG 107 >gi|68537118|ref|YP_251823.1| putative cytosine/adenosine deaminase [Corynebacterium jeikeium K411] gi|68264717|emb|CAI38205.1| putative cytosine/adenosine deaminase [Corynebacterium jeikeium K411] Length = 142 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 3/130 (2%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79 ++PVGAV + + + + R NR D TAHAEILAIR + L L + L VT Sbjct: 14 GDVPVGAVILGPDGRELGRGVNRREADNDPTAHAEILAIREAVQELGDAWRLEDCTLVVT 73 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA A+ ARI + +GA P+ G + + H + E+ G+ + Sbjct: 74 LEPCAMCAGALVGARIGSIIFGAYEPRTGACGSVWDVPRESPLHWA-EVRGGVLAGECEE 132 Query: 140 IIQDFFKERR 149 +++ FF R Sbjct: 133 LLRQFFARLR 142 >gi|328857268|gb|EGG06385.1| hypothetical protein MELLADRAFT_86571 [Melampsora larici-populina 98AG31] Length = 171 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 12/111 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 MS A++ A+ A NEIPVG V + L+ K+IS+ NR E ++ + HAE A+ + Sbjct: 1 MSEAIKMAEEAFSANEIPVGCVFINELDGKLISKGRNRTNETRNASLHAEFDALS---SL 57 Query: 66 LSQEILPEVD-------LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 L P + LYVT+EPC MC++A+ I+++++G SN + GG Sbjct: 58 LPNPKNPNLKTDFKNLTLYVTVEPCLMCSSALRQIGIKKVFFGCSNDRFGG 108 >gi|241617471|ref|XP_002406922.1| tRNA-specific adenosine deaminase, putative [Ixodes scapularis] gi|215500893|gb|EEC10387.1| tRNA-specific adenosine deaminase, putative [Ixodes scapularis] Length = 188 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 8/144 (5%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M + A+ A E+PVG V ++I+R NR + K+ HAE+ + + Sbjct: 25 MDACFQLAEEALAAGEVPVGCVMFYAGQVIARGRNRVNKTKNACRHAEMDCVDQVLDWCA 84 Query: 68 Q------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + E+ V ++VT+EPC MCAAA+ R+ R+ +G N + GG+ G+ L Sbjct: 85 ERGLDTGEVFRGVSVFVTVEPCIMCAAALDSLRVSRVVFGCPNERFGGV--GSVLDVLRG 142 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 + G+ +R+ ++++F+ Sbjct: 143 TGGRTVVVAGVRAERAVNLLKEFY 166 >gi|47156908|gb|AAT12300.1| cytidine and deoxycytidylate deaminase-like protein [Antonospora locustae] Length = 156 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 9/110 (8%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM A+ EA+ A E+PVG V V + +ISR N D AHAE++A+R Sbjct: 1 MDYNSQFMDEAVSEAEKALEAGEVPVGCVVVREDAVISRGHNMTNRESDPLAHAELVALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR-RLYYGASNPKGGG 109 S E L Y+T EPC MC L RIR R++YG NP GG Sbjct: 61 ---HCASAESLV---FYITCEPCIMCLGV--LGRIRARVFYGCRNPIFGG 102 >gi|116494635|ref|YP_806369.1| cytosine/adenosine deaminase [Lactobacillus casei ATCC 334] gi|227535386|ref|ZP_03965435.1| guanine deaminase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631766|ref|ZP_04674797.1| cytosine/adenosine deaminase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|116104785|gb|ABJ69927.1| Cytosine/adenosine deaminase [Lactobacillus casei ATCC 334] gi|227186982|gb|EEI67049.1| guanine deaminase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239526231|gb|EEQ65232.1| cytosine/adenosine deaminase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 155 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 1/96 (1%) Query: 7 FMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ A EEA+ N + P G V + + K++SRA N+ D TAH EI AIR + Sbjct: 6 FMAMANEEAKANVNGSDGGPFGCVIIKDGKVVSRAHNQVLVDHDPTAHGEITAIRKAGQA 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 L L +LY + PC MC +AI A I+++YYG Sbjct: 66 LGTHDLTGCELYTSAMPCPMCLSAIIWANIKQVYYG 101 >gi|150402044|ref|YP_001329338.1| CMP/dCMP deaminase zinc-binding [Methanococcus maripaludis C7] gi|150033074|gb|ABR65187.1| CMP/dCMP deaminase zinc-binding [Methanococcus maripaludis C7] Length = 145 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 18/144 (12%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA+ IP+GAV V NKII R NR + HAE+ A+ R L Sbjct: 4 FMDEAIKEAKLGLKEGGIPIGAVLVYKNKIIGRGHNRRVQNNSAILHAEMDALENAGR-L 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTLATC 122 + ++ +LY TL PC MC+ A+ L +I+++ G + G ++NG L Sbjct: 63 TSDVYRNCELYTTLSPCIMCSGAVLLYKIKKVVIGENKTFLGAEDLLLKNGVAVEVL--- 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFK 146 +++R ++++DF K Sbjct: 120 ----------NDERCVKMMKDFIK 133 >gi|301066190|ref|YP_003788213.1| cytosine/adenosine deaminase [Lactobacillus casei str. Zhang] gi|300438597|gb|ADK18363.1| Cytosine/adenosine deaminase [Lactobacillus casei str. Zhang] Length = 155 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 1/96 (1%) Query: 7 FMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ A EEA+ N + P G V + + K++SRA N+ D TAH EI AIR + Sbjct: 6 FMAMANEEAKANVNGSDGGPFGCVIIKDGKVVSRAHNQVLVDHDPTAHGEITAIRKAGQA 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 L L +LY + PC MC +AI A I+++YYG Sbjct: 66 LGTHDLTGCELYTSAMPCPMCLSAIIWANIKQVYYG 101 >gi|226324154|ref|ZP_03799672.1| hypothetical protein COPCOM_01932 [Coprococcus comes ATCC 27758] gi|225207703|gb|EEG90057.1| hypothetical protein COPCOM_01932 [Coprococcus comes ATCC 27758] Length = 153 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 50/95 (52%) Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + L + +++ L E LYVTLEPC MC+ AI ARI R+ G NPK G + Sbjct: 3 KFLQSKKASKVMGDWRLEECTLYVTLEPCQMCSGAIVQARIPRVVVGCMNPKAGCAGSIL 62 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +H E+ GI E+ Q+++ FFKE R Sbjct: 63 NLLQVEAFNHQAELTTGILEEECSQMMKSFFKELR 97 >gi|310819974|ref|YP_003952332.1| cytidine and deoxycytidylate deaminase zinc-binding domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309393046|gb|ADO70505.1| Cytidine and deoxycytidylate deaminase zinc-binding domain protein [Stigmatella aurantiaca DW4/3-1] Length = 154 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 74/143 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL A+ A E+PVGAVAV ++I NR + AHAE+LA+ R L Sbjct: 6 FMQQALALAREAEALGEVPVGAVAVHQGQVIGTGFNRREIDRHPFAHAELLALDAAARSL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L V LYVTLEPC MCA A+ R+ RL +G +PK G + +H Sbjct: 66 GVWRLTGVTLYVTLEPCAMCAGAMVQGRVTRLVFGTLDPKAGAAGSLYNLVEEPRHNHRL 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI SRQ+++ FF+ R Sbjct: 126 QVTSGILADESRQLLKGFFERLR 148 >gi|209964980|ref|YP_002297895.1| guanine deaminase [Rhodospirillum centenum SW] gi|209958446|gb|ACI99082.1| guanine deaminase [Rhodospirillum centenum SW] Length = 158 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 10/112 (8%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV VL+ ++ NR D TAHAEI+AIR C L + L +Y + EPC Sbjct: 27 PFGAVIVLDGTVVGEGWNRVTSSNDPTAHAEIVAIREACARLGRFDLRGATVYSSCEPCP 86 Query: 85 MCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLA--------TCHHSP 126 MC AAI AR+ RL Y + + G ++ + + CHH P Sbjct: 87 MCLAAIHWARLDRLVYANTRDEAAAIGFDDALIYDQIPLPPAQRRLPCHHHP 138 >gi|169633781|ref|YP_001707517.1| guanine deaminase (Guanase) (guanine aminase) (guanine aminohydrolase) (GAH) (GDEase) [Acinetobacter baumannii SDF] gi|169152573|emb|CAP01555.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) [Acinetobacter baumannii] Length = 160 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 56/107 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK F+ A+E A N + P GAV V + K+I+ N+ D TAHAE+LAIR Sbjct: 1 MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 ++L L ++ + PC MC AA+ LA I+ + Y SN G Sbjct: 61 AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDG 107 >gi|330995719|ref|ZP_08319617.1| guanine deaminase [Paraprevotella xylaniphila YIT 11841] gi|329574778|gb|EGG56339.1| guanine deaminase [Paraprevotella xylaniphila YIT 11841] Length = 155 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 53/110 (48%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E + P GAV V ++I++ NR D TAHAE+ AIR CR L Sbjct: 6 FMRKAIELSVENVKNGGGPFGAVIVKGDEIVATGVNRVTAHNDPTAHAEVSAIREACRRL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L ++Y + EPC MC AI A + ++YYG + I F Sbjct: 66 GTFDLSGCEIYTSCEPCPMCLGAIYWAHLDKIYYGNNKDDAADIGFDDSF 115 >gi|332874597|ref|ZP_08442498.1| putative guanine deaminase [Acinetobacter baumannii 6014059] gi|322507943|gb|ADX03397.1| guaD [Acinetobacter baumannii 1656-2] gi|323517535|gb|ADX91916.1| CMP/dCMP deaminase zinc-binding protein [Acinetobacter baumannii TCDC-AB0715] gi|332737235|gb|EGJ68161.1| putative guanine deaminase [Acinetobacter baumannii 6014059] Length = 160 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 56/107 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK F+ A+E A N + P GAV V + K+I+ N+ D TAHAE+LAIR Sbjct: 1 MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 ++L L ++ + PC MC AA+ LA I+ + Y SN G Sbjct: 61 AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDG 107 >gi|260555502|ref|ZP_05827723.1| guanine deaminase [Acinetobacter baumannii ATCC 19606] gi|260412044|gb|EEX05341.1| guanine deaminase [Acinetobacter baumannii ATCC 19606] Length = 160 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 56/107 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK F+ A+E A N + P GAV V + K+I+ N+ D TAHAE+LAIR Sbjct: 1 MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 ++L L ++ + PC MC AA+ LA I+ + Y SN G Sbjct: 61 AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDG 107 >gi|191638132|ref|YP_001987298.1| Guanine deaminase [Lactobacillus casei BL23] gi|190712434|emb|CAQ66440.1| Guanine deaminase [Lactobacillus casei BL23] gi|327382160|gb|AEA53636.1| Cytidine/deoxycytidylate deaminase [Lactobacillus casei LC2W] gi|327385358|gb|AEA56832.1| Cytidine/deoxycytidylate deaminase [Lactobacillus casei BD-II] Length = 155 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 1/105 (0%) Query: 7 FMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ A EEA+ N + P G V + + K++SRA N+ D TAH EI AIR + Sbjct: 6 FMAMANEEAKANVNGSDGGPFGCVIIKDGKVVSRAHNQVLVDHDPTAHGEITAIRKAGQA 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 L L +LY + PC MC +AI A I+++YYG + I Sbjct: 66 LGTHDLTGCELYTSAMPCPMCLSAIIWANIKQVYYGNTADDAAAI 110 >gi|146179283|ref|XP_001470903.1| conserved hypothetical protein [Tetrahymena thermophila] gi|146144561|gb|EDK31523.1| conserved hypothetical protein [Tetrahymena thermophila SB210] Length = 160 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 1/101 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNE-IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M F+ A++EA+ A + + P G V V + KII RA NR D TAHAE +AI Sbjct: 4 MNDHQYFIQEAIKEAELAVITGDGEPFGCVIVRDGKIIVRAHNRLYIDYDPTAHAETVAI 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 R+ C+ IL + +Y + +PC MC+ AIS + +YY Sbjct: 64 RLACKQEKSLILKDCIIYASAQPCPMCSTAISACGAKEVYY 104 >gi|261416951|ref|YP_003250634.1| CMP/dCMP deaminase zinc-binding protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373407|gb|ACX76152.1| CMP/dCMP deaminase zinc-binding protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327524|gb|ADL26725.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 164 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 55/110 (50%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++ + + P GAV V + ++++ NR D TAHAE+ AIR C L Sbjct: 15 FMQMAIQLSVDNVDNGGGPFGAVIVKDGEVVATGANRVVPNNDPTAHAEVTAIRNACAKL 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 +L +Y + EPC MC +A+ AR++R+ Y + IE F Sbjct: 75 GTFMLDGCTVYTSCEPCPMCLSALYWARVKRICYANTKVDAAAIEFDDSF 124 >gi|15806226|ref|NP_294931.1| cell cycle protein MesJ /cytosine deaminase-like protein [Deinococcus radiodurans R1] gi|84039866|gb|AAF10777.2|AE001969_6 cell cycle protein MesJ, putative/cytosine deaminase-related protein [Deinococcus radiodurans R1] Length = 600 Score = 68.2 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 50/131 (38%), Positives = 69/131 (52%), Gaps = 4/131 (3%) Query: 21 RNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78 R E+PVGAV VLN +I+ R N +RE D+T HAE+ A+R L L + L V Sbjct: 439 RQEVPVGAV-VLNADGEIVGRGRNTSREDGDMTCHAELAALREAAAGLGTPYLSDCTLVV 497 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 TLEPC MC A ARI + YGA+NPK G + G P + G+ + Sbjct: 498 TLEPCPMCLGAALEARIGHIVYGAANPKAGAL-GGVSDLLADHWGWRPTVQGGVRAGEAA 556 Query: 139 QIIQDFFKERR 149 +++++ F E R Sbjct: 557 RLLREVFGEVR 567 >gi|332876785|ref|ZP_08444543.1| guanine deaminase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685344|gb|EGJ58183.1| guanine deaminase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 155 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 53/110 (48%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E + P GAV V ++I++ NR D TAHAE+ AIR CR L Sbjct: 6 FMRKAIELSVENVKNGGGPFGAVIVKGDEIVATGVNRVTAHNDPTAHAEVSAIREACRRL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L ++Y + EPC MC AI A + ++YYG + I F Sbjct: 66 GTFDLSGCEIYTSCEPCPMCLGAIYWAHLDKIYYGNNKDDAADIGFDDSF 115 >gi|52079816|ref|YP_078607.1| guanine deaminase [Bacillus licheniformis ATCC 14580] gi|52785186|ref|YP_091015.1| GuaD [Bacillus licheniformis ATCC 14580] gi|319646374|ref|ZP_08000604.1| GuaD protein [Bacillus sp. BT1B_CT2] gi|52003027|gb|AAU22969.1| guanine deaminase [Bacillus licheniformis ATCC 14580] gi|52347688|gb|AAU40322.1| GuaD [Bacillus licheniformis ATCC 14580] gi|317392124|gb|EFV72921.1| GuaD protein [Bacillus sp. BT1B_CT2] Length = 156 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 2/90 (2%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + +II+ N D TAHAE+ AIR+ C L L + LY + EPC Sbjct: 25 PFGAVIVKDGQIIAEGKNNVTTSNDPTAHAEVTAIRLACEALGDYQLNDCILYTSCEPCP 84 Query: 85 MCAAAISLARIRRLYYGA--SNPKGGGIEN 112 MC AI AR + +Y+ A S+ G ++ Sbjct: 85 MCLGAIYWARPKEVYFAAQHSDAASAGFDD 114 >gi|291326525|ref|ZP_06124898.2| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131] gi|291314071|gb|EFE54524.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131] Length = 169 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 6/145 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ AL A +AA P GAV V NN+++ N D T HAE+ IR C Sbjct: 23 FMTQALALATDAAKNGNEPFGAVLVKNNQVVMTGENHIHTESDPTYHAELGLIRQYCSEH 82 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-----GGGIENGTQFYTLAT 121 L + LY + EPC MC+ A+ +++ R+ Y S+ + G I G+ A Sbjct: 83 KVMDLSDYTLYTSCEPCCMCSGAMVWSQLGRMVYSLSHDELAEIAGFNIMLGSD-EIFAK 141 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFK 146 PE+ G+ ++++ I +FK Sbjct: 142 SPFKPEVVKGVLKEQAISIYTQYFK 166 >gi|300120277|emb|CBK19831.2| unnamed protein product [Blastocystis hominis] Length = 155 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 20/144 (13%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR--MGCR 64 ++ A EEA A E+P+G V V +N T HAE++AI +G Sbjct: 10 YLELAYEEANVAFEEREVPIGCVFVKDN---------------ATLHAEMVAISRTLGAN 54 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT---LAT 121 I LYVT+EPC MCA+AI+ + R+ +GASN + GG + + + Sbjct: 55 GNDPTIFEGSTLYVTIEPCIMCASAIAQIGVSRVVFGASNDRFGGCGSVLSLHDQNEFSA 114 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 H E+ I ++RS +I+Q F+ Sbjct: 115 GHKHYEVTRHIQKERSIEILQRFY 138 >gi|157691996|ref|YP_001486458.1| guanine deaminase [Bacillus pumilus SAFR-032] gi|157680754|gb|ABV61898.1| guanine deaminase [Bacillus pumilus SAFR-032] Length = 156 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 45/80 (56%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + +II+ N D TAHAE+ AIR C+ L+ L + LY + EPC Sbjct: 25 PFGAVIVKDGQIIAEGSNNVTTTNDPTAHAEVTAIRKACQTLNTYQLEDCILYTSCEPCP 84 Query: 85 MCAAAISLARIRRLYYGASN 104 MC AI AR + +Y+ A + Sbjct: 85 MCLGAIYWARPKAVYFAAGH 104 >gi|326428921|gb|EGD74491.1| tRNA-specific adenosine deaminase [Salpingoeca sp. ATCC 50818] Length = 191 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 7/140 (5%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAI-----RM 61 M A+ EAQ A E+PVG V V +N + AG ++ + T HAE++A R Sbjct: 1 MEAAVAEAQRALAEGEVPVGCVFVDDNGNVQAAGRNQTNIEHNATRHAELVAFDDCVARC 60 Query: 62 GCRI-LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 G + +++I+ LYVT+EPC MCA A+ L + R+ +G N + GG + T Sbjct: 61 GGDVEKAKDIVASCTLYVTVEPCVMCAYALRLLGVTRVVFGCHNDRFGGCGSTMDVATCE 120 Query: 121 TCHHSPEIYPGISEQRSRQI 140 T P++ R+R I Sbjct: 121 TPDGLPKLQLEAGPMRTRAI 140 >gi|115378509|ref|ZP_01465666.1| tRNA-specific adenosine deaminase [Stigmatella aurantiaca DW4/3-1] gi|115364478|gb|EAU63556.1| tRNA-specific adenosine deaminase [Stigmatella aurantiaca DW4/3-1] Length = 148 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 49/128 (38%), Positives = 67/128 (52%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAVAV ++I NR + AHAE+LA+ R L L V LYVTLE Sbjct: 15 GEVPVGAVAVHQGQVIGTGFNRREIDRHPFAHAELLALDAAARSLGVWRLTGVTLYVTLE 74 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA A+ R+ RL +G +PK G + +H ++ GI SRQ++ Sbjct: 75 PCAMCAGAMVQGRVTRLVFGTLDPKAGAAGSLYNLVEEPRHNHRLQVTSGILADESRQLL 134 Query: 142 QDFFKERR 149 + FF+ R Sbjct: 135 KGFFERLR 142 >gi|194015030|ref|ZP_03053647.1| cytidine/deoxycytidylate deaminase family protein [Bacillus pumilus ATCC 7061] gi|194014056|gb|EDW23621.1| cytidine/deoxycytidylate deaminase family protein [Bacillus pumilus ATCC 7061] Length = 156 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 45/80 (56%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + +II+ N D TAHAE+ AIR C+ L+ L + LY + EPC Sbjct: 25 PFGAVIVKDGQIIAEGSNNVTTTNDPTAHAEVTAIRKACQTLNTYQLEDCILYTSCEPCP 84 Query: 85 MCAAAISLARIRRLYYGASN 104 MC AI AR + +Y+ A + Sbjct: 85 MCLGAIYWARPKAVYFAAGH 104 >gi|188589366|ref|YP_001919994.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum E3 str. Alaska E43] gi|188499647|gb|ACD52783.1| guanine deaminase [Clostridium botulinum E3 str. Alaska E43] Length = 157 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/79 (44%), Positives = 46/79 (58%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA V ++KII+ A N + D TAH E+ AIR C LS L +LY T EPC Sbjct: 25 PFGAAIVKDSKIIALANNTVIKDNDPTAHGEMNAIRQACNKLSTFDLSGCELYTTSEPCP 84 Query: 85 MCAAAISLARIRRLYYGAS 103 MC +AI + I ++YYG + Sbjct: 85 MCMSAIIWSNISKVYYGCT 103 >gi|134045717|ref|YP_001097203.1| cytosine deaminase [Methanococcus maripaludis C5] gi|132663342|gb|ABO34988.1| Cytosine deaminase [Methanococcus maripaludis C5] Length = 145 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 18/144 (12%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ AL+EA+ IP+GAV V N+II R NR + HAE+ A+ R L Sbjct: 4 FIDEALKEAKLGLEEGGIPIGAVLVYKNEIIGRGHNRRVQNNSAILHAEMDALENAGR-L 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTLATC 122 + ++ +LY TL PC MC+ A+ L +I+++ G + G I+NG L Sbjct: 63 TSDVYKNCELYTTLSPCIMCSGAVLLYKIKKVIIGENETFLGAENLLIKNGVDVEVL--- 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFK 146 +++R ++++DF K Sbjct: 120 ----------NDERCVKMMEDFIK 133 >gi|61216750|sp|Q9RV23|TILS_DEIRA RecName: Full=tRNA(Ile)-lysidine synthase; AltName: Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName: Full=tRNA(Ile)-lysidine synthetase Length = 582 Score = 67.8 bits (164), Expect = 4e-10, Method: Composition-based stats. Identities = 50/131 (38%), Positives = 69/131 (52%), Gaps = 4/131 (3%) Query: 21 RNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78 R E+PVGAV VLN +I+ R N +RE D+T HAE+ A+R L L + L V Sbjct: 421 RQEVPVGAV-VLNADGEIVGRGRNTSREDGDMTCHAELAALREAAAGLGTPYLSDCTLVV 479 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 TLEPC MC A ARI + YGA+NPK G + G P + G+ + Sbjct: 480 TLEPCPMCLGAALEARIGHIVYGAANPKAGAL-GGVSDLLADHWGWRPTVQGGVRAGEAA 538 Query: 139 QIIQDFFKERR 149 +++++ F E R Sbjct: 539 RLLREVFGEVR 549 >gi|33323001|gb|AAQ07237.1|AF496545_1 hypothetical protein [Lactobacillus delbrueckii subsp. lactis] Length = 89 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 47/73 (64%) Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136 +VTLEPC MCA AI +RI+ +Y+ A +PK G + +++ +H PE+ G+ +++ Sbjct: 1 FVTLEPCAMCAGAIINSRIKEVYFAAMDPKAGAAGSVVDLFSVEKFNHHPEVIRGLYKEQ 60 Query: 137 SRQIIQDFFKERR 149 +++DFF+E R Sbjct: 61 GALLLKDFFREIR 73 >gi|184157635|ref|YP_001845974.1| cytosine/adenosine deaminase [Acinetobacter baumannii ACICU] gi|183209229|gb|ACC56627.1| Cytosine/adenosine deaminase [Acinetobacter baumannii ACICU] Length = 158 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 56/107 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK F+ A+E A N + P GAV V + K+I+ N+ D TAHAE+LAIR Sbjct: 1 MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 ++L L ++ + PC MC AA+ LA I+ + Y SN G Sbjct: 61 AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDG 107 >gi|311067822|ref|YP_003972745.1| guanine deaminase [Bacillus atrophaeus 1942] gi|310868339|gb|ADP31814.1| guanine deaminase [Bacillus atrophaeus 1942] Length = 156 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 41/103 (39%), Positives = 53/103 (51%), Gaps = 5/103 (4%) Query: 5 NVFMSCALE---EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N F+ A+E E NA + P GAV V + KII+ N D TAHAE+ AIR Sbjct: 4 NEFLQRAVELATEGVNAGIGG--PFGAVIVKDGKIIAEGQNNVTTSNDPTAHAEVTAIRN 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 C L L + LY + EPC MC AI AR + +YY + + Sbjct: 62 ACEALGSYQLDDCILYTSCEPCPMCLGAIYWARPKAVYYASEH 104 >gi|194476730|ref|YP_002048909.1| cytidine/deoxycytidylate deaminase family protein [Paulinella chromatophora] gi|171191737|gb|ACB42699.1| cytidine/deoxycytidylate deaminase family protein [Paulinella chromatophora] Length = 157 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 3/129 (2%) Query: 23 EIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++P+ AV +LN + + N + +D HAE++A+R + + L VTL Sbjct: 28 DVPIAAV-ILNGAGQCVGWGRNSREKNQDPMGHAELIALRQAAVLRGSWRFDDCTLIVTL 86 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A+ AR++ + YG+ + K G + A+ HH + G+ + ++ Sbjct: 87 EPCPMCAGALVQARMKFVVYGSYDYKRGALGGTVDLSNHASAHHYMKTKGGLEGTLASEV 146 Query: 141 IQDFFKERR 149 ++ +F+ RR Sbjct: 147 LETWFRRRR 155 >gi|72392897|ref|XP_847249.1| deaminase [Trypanosoma brucei TREU927] gi|62176083|gb|AAX70202.1| deaminase, putative [Trypanosoma brucei] gi|70803279|gb|AAZ13183.1| deaminase, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 225 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 77/170 (45%), Gaps = 44/170 (25%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-----------------LNNKIISRAGNRNREL 47 +VFM AL+EA A E+PVG V V L I++R N Sbjct: 25 DVFMQAALKEATCALEEGEVPVGCVLVKADSSTAAQAQAGDDLALQKLIVARGRNATNRK 84 Query: 48 KDVTAHAEILAIRM-----------------GCRILSQEILPEVDLYVTLEPCTMCAAAI 90 AHAE +A+ C +SQ++ V LYV +EPC MCAA + Sbjct: 85 GHALAHAEFVAVEELLRQATAGTSENIGGGGNCGAVSQDLADYV-LYVVVEPCIMCAAML 143 Query: 91 SLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 R+R++Y+G +NP+ GG NG T+ + H+S Y G S + + I Sbjct: 144 LYNRVRKVYFGCTNPRFGG--NG----TVLSVHNS---YKGCSGEDAALI 184 >gi|312129827|ref|YP_003997167.1| cmp/dcmp deaminase zinc-binding protein [Leadbetterella byssophila DSM 17132] gi|311906373|gb|ADQ16814.1| CMP/dCMP deaminase zinc-binding protein [Leadbetterella byssophila DSM 17132] Length = 168 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/81 (39%), Positives = 47/81 (58%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +P+G V V N +II N E + T+H E++AI CR ++ L E +Y TLEPC Sbjct: 31 LPIGCVIVRNGEIIGEGHNEIFERVNPTSHGEMVAIERACRNINSLQLSECQMYTTLEPC 90 Query: 84 TMCAAAISLARIRRLYYGASN 104 MC AI A+I ++Y+ +N Sbjct: 91 PMCLGAIYWAKINKVYFANTN 111 >gi|261330463|emb|CBH13447.1| deaminase, putative [Trypanosoma brucei gambiense DAL972] Length = 225 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 66/144 (45%), Gaps = 37/144 (25%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-----------------LNNKIISRAGNRNREL 47 +VFM AL+EA A E+PVG V V L I++R N Sbjct: 25 DVFMQAALKEATCALEEGEVPVGCVLVKADSSTAAQAQAGDDLALQKLIVARGRNATNRK 84 Query: 48 KDVTAHAEILAIRM-----------------GCRILSQEILPEVDLYVTLEPCTMCAAAI 90 AHAE +A+ C +SQ++ V LYV +EPC MCAA + Sbjct: 85 GHALAHAEFVAVEELLRQATAGTSENIGGGGNCGAVSQDLADYV-LYVVVEPCIMCAAML 143 Query: 91 SLARIRRLYYGASNPKGGGIENGT 114 R+R++Y+G +NP+ GG NGT Sbjct: 144 LYNRVRKVYFGCTNPRFGG--NGT 165 >gi|187935669|ref|YP_001884839.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum B str. Eklund 17B] gi|187723822|gb|ACD25043.1| guanine deaminase [Clostridium botulinum B str. Eklund 17B] Length = 157 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/79 (44%), Positives = 44/79 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA V + +II+ A N D TAH E+ AIR C LS L +LY T EPC Sbjct: 25 PFGAAIVKDGEIIALANNTVISTNDPTAHGEVNAIRQACSKLSTFDLTGCELYTTSEPCP 84 Query: 85 MCAAAISLARIRRLYYGAS 103 MC +AI A I ++YYG + Sbjct: 85 MCMSAIIWANISKVYYGCT 103 >gi|284037689|ref|YP_003387619.1| CMP/dCMP deaminase zinc-binding protein [Spirosoma linguale DSM 74] gi|283816982|gb|ADB38820.1| CMP/dCMP deaminase zinc-binding protein [Spirosoma linguale DSM 74] Length = 158 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 1/115 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + VF+ A++ A+ ++ P G+V V + +I+ + N D TAHAE++AIR Sbjct: 4 QDEVFLREAIQLAREGMTTDQGGPFGSVIVRDGQIVGKGFNMVTSTNDPTAHAEVVAIRD 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 CR L L LY + EPC MC AI AR R+ Y A + + QF Sbjct: 64 ACRNLGTFQLDGCTLYASCEPCPMCLGAIYWARPSRVVYAAQHADAASVGFDDQF 118 >gi|227538659|ref|ZP_03968708.1| possible cytosine deaminase [Sphingobacterium spiritivorum ATCC 33300] gi|227241578|gb|EEI91593.1| possible cytosine deaminase [Sphingobacterium spiritivorum ATCC 33300] Length = 94 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 6/100 (6%) Query: 50 VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 +TAHAE+ A L + L + LYVT+EPC MCA A ++ R+ YGA + K G Sbjct: 1 MTAHAEMQAFTAASSYLGGKYLKDCTLYVTVEPCVMCAGASYWTQVSRIVYGAPDEKRGA 60 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G F H EI G+ ++ ++I FF+++R Sbjct: 61 SRYGKLF------HPKTEIISGVLQEECAELITSFFRQKR 94 >gi|220904518|ref|YP_002479830.1| CMP/dCMP deaminase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868817|gb|ACL49152.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 155 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 40/100 (40%), Positives = 53/100 (53%), Gaps = 2/100 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E ++ + P GAV V + KII N D TAHAE+ AIR CR L Sbjct: 6 FMERAIELSKQSMAAGGGPFGAVIVRDGKIIGEGTNNVTPHNDPTAHAEVEAIRNACRAL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 L ++ + EPC MC +AI ARI ++Y+ SN K Sbjct: 66 ETFDLSGSAIFTSCEPCPMCLSAIWWARIGKIYF--SNTK 103 >gi|251780701|ref|ZP_04823621.1| guanine deaminase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085016|gb|EES50906.1| guanine deaminase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 157 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/79 (44%), Positives = 45/79 (56%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA V + KII+ A N + D TAH E+ AIR C LS L +LY T EPC Sbjct: 25 PFGAAIVKDGKIIALANNTVIKDNDPTAHGEMNAIRQACNKLSTFDLSGCELYTTSEPCP 84 Query: 85 MCAAAISLARIRRLYYGAS 103 MC +AI + I ++YYG + Sbjct: 85 MCMSAIIWSNISKVYYGCT 103 >gi|302873177|ref|YP_003841810.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B] gi|307688659|ref|ZP_07631105.1| CMP/dCMP deaminase zinc-binding protein [Clostridium cellulovorans 743B] gi|302576034|gb|ADL50046.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B] Length = 169 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 11/145 (7%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIR-MGCR 64 +++ A EEA A P+GAV V ++ I+S+ NR D TAHAE+ AIR G + Sbjct: 8 YLALAFEEANQAFEEGTYPIGAVIVDDDGNIVSKGRNRVFTESDCTAHAEVDAIRKAGHK 67 Query: 65 ILS----QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI---ENGTQFY 117 +L + + + LY T EPC MC I L+ I+R+ + A + + GGI + G F Sbjct: 68 LLDIPNKRFVKNNLTLYTTCEPCPMCTCTILLSGIKRVVWAADDDEYGGIRKFKEGPHFI 127 Query: 118 TL-ATCHHSPEIYPGISEQRSRQII 141 L T ++ Y + E + R ++ Sbjct: 128 NLFDTITYTASPYDDL-ENKQRDLL 151 >gi|260579466|ref|ZP_05847346.1| cytidine/deoxycytidylate deaminase family protein [Corynebacterium jeikeium ATCC 43734] gi|258602409|gb|EEW15706.1| cytidine/deoxycytidylate deaminase family protein [Corynebacterium jeikeium ATCC 43734] Length = 193 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 65/130 (50%), Gaps = 3/130 (2%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79 ++PVGAV + + + + R NR D TAHAEILAIR + L L + L VT Sbjct: 65 GDVPVGAVILGPDGRELGRGVNRREADNDPTAHAEILAIREAVQELGDAWRLEDCTLVVT 124 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA A+ ARI + +GA P+ G + + H E+ G+ + Sbjct: 125 LEPCAMCAGALVGARIGSIIFGAYEPRTGACGSVWDVPRESPLHWV-EVRGGVLAGECEE 183 Query: 140 IIQDFFKERR 149 +++ FF R Sbjct: 184 LLRQFFARLR 193 >gi|163792400|ref|ZP_02186377.1| putative nucleotide deaminase [alpha proteobacterium BAL199] gi|159182105|gb|EDP66614.1| putative nucleotide deaminase [alpha proteobacterium BAL199] Length = 156 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 43/109 (39%), Positives = 54/109 (49%), Gaps = 2/109 (1%) Query: 11 ALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A+E +Q NA P GAV V + I+ NR D TAHAE++AIR CR L Sbjct: 10 AIELSQGNAEAATGGPFGAVVVRDGMIVGEGANRVITDFDPTAHAEVVAIRAACRQLGTY 69 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFY 117 L +Y + EPC MC AAI ARI R+ Y + I + FY Sbjct: 70 DLSGAVIYTSCEPCPMCLAAILWARIDRMVYANTRADAAAIGFDDAWFY 118 >gi|315647606|ref|ZP_07900708.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus vortex V453] gi|315277045|gb|EFU40386.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus vortex V453] Length = 159 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 1/111 (0%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+EEA QN P GA+ V K+I R N L D TAHAE+ AIR C Sbjct: 9 WMQIAIEEAHQNVQNVEGGPFGAIVVKEGKVIGRGRNLVTALNDPTAHAEVQAIREACLH 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + L +Y + EPC MC AI +R +YY ++ + I F Sbjct: 69 MEDFQLKGCTIYTSCEPCPMCLGAIYWSRPDAVYYASTKKEAAEIGFDDHF 119 >gi|149278879|ref|ZP_01885014.1| cytidine/deoxycytidylate deaminase family protein [Pedobacter sp. BAL39] gi|149230498|gb|EDM35882.1| cytidine/deoxycytidylate deaminase family protein [Pedobacter sp. BAL39] Length = 168 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 1/96 (1%) Query: 7 FMSCALEEAQNAALRNE-IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A++ ++ + + P GA V ++I+++ N+ D TAHAE+ AIR+ C+ Sbjct: 17 FMKIAIDASEENVISGKGTPFGAAIVKEGQLIAKSANKVTADNDPTAHAEVAAIRIACQE 76 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 L+ L +Y + EPC MC AAI ++I +YYG Sbjct: 77 LNTYDLTGCVIYTSCEPCPMCLAAIYWSKISVVYYG 112 >gi|268317845|ref|YP_003291564.1| CMP/dCMP deaminase zinc-binding protein [Rhodothermus marinus DSM 4252] gi|262335379|gb|ACY49176.1| CMP/dCMP deaminase zinc-binding protein [Rhodothermus marinus DSM 4252] Length = 155 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 45/79 (56%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P A+ V + ++++ NR D TAHAEI+AIR CR L L DLY + EPC Sbjct: 24 PFAALVVRDGEVLAAGTNRVTTDNDPTAHAEIVAIREACRRLGHFQLTGCDLYTSCEPCP 83 Query: 85 MCAAAISLARIRRLYYGAS 103 MC AI AR R++Y A+ Sbjct: 84 MCLGAIYWARPARVFYAAT 102 >gi|268591994|ref|ZP_06126215.1| guanine deaminase [Providencia rettgeri DSM 1131] gi|291312385|gb|EFE52838.1| guanine deaminase [Providencia rettgeri DSM 1131] Length = 155 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 58/97 (59%), Gaps = 4/97 (4%) Query: 12 LEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 L++A N A+ N P GA+ V + ++++ N+ EL D TAHAE++A+R + LS Sbjct: 7 LQQAINLAMENVRAGGRPFGAIVVCDGQVVASGVNQMLELNDPTAHAELMALRQAGQKLS 66 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 + L + +Y + +PC MC AAI +A I R+ Y SN Sbjct: 67 RVKLDDCVVYASGQPCPMCLAAIRMAGISRVVYAYSN 103 >gi|224536998|ref|ZP_03677537.1| hypothetical protein BACCELL_01874 [Bacteroides cellulosilyticus DSM 14838] gi|224521365|gb|EEF90470.1| hypothetical protein BACCELL_01874 [Bacteroides cellulosilyticus DSM 14838] Length = 188 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 34/77 (44%), Positives = 43/77 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV N +II+ NR D TAHAE+ AIR C+ L L ++Y + EPC Sbjct: 57 PFGAVIARNGEIIATGVNRVTAEHDPTAHAEVSAIRAACKKLGTFDLSGCEIYTSCEPCP 116 Query: 85 MCAAAISLARIRRLYYG 101 MC AI A I ++YYG Sbjct: 117 MCLGAIYWAHIDKMYYG 133 >gi|51248026|pdb|1WKQ|A Chain A, Crystal Structure Of Bacillus Subtilis Guanine Deaminase. The First Domain-Swapped Structure In The Cytidine Deaminase Superfamily gi|51248027|pdb|1WKQ|B Chain B, Crystal Structure Of Bacillus Subtilis Guanine Deaminase. The First Domain-Swapped Structure In The Cytidine Deaminase Superfamily Length = 164 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 44/80 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + II+ N D TAHAE+ AIR C++L L + LY + EPC Sbjct: 33 PFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQLDDCILYTSCEPCP 92 Query: 85 MCAAAISLARIRRLYYGASN 104 MC AI AR + ++Y A + Sbjct: 93 MCLGAIYWARPKAVFYAAEH 112 >gi|313682141|ref|YP_004059879.1| cmp/dcmp deaminase zinc-binding protein [Sulfuricurvum kujiense DSM 16994] gi|313155001|gb|ADR33679.1| CMP/dCMP deaminase zinc-binding protein [Sulfuricurvum kujiense DSM 16994] Length = 145 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 40/95 (42%), Positives = 50/95 (52%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EAQ IP+G+V V N KII R NR + V H E+ A+ R L Sbjct: 4 FMKEALLEAQKGLEEGGIPIGSVLVHNGKIIGRGHNRRIQKGSVILHGEMDALENAGR-L 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 S + E LY TL PC MC+ AI+L I ++ G Sbjct: 63 SASLYKECTLYTTLSPCPMCSGAIALYGIPKVVVG 97 >gi|16078382|ref|NP_389200.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. 168] gi|221309178|ref|ZP_03591025.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. 168] gi|221313504|ref|ZP_03595309.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318426|ref|ZP_03599720.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. JH642] gi|221322700|ref|ZP_03603994.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. SMY] gi|321315069|ref|YP_004207356.1| guanine deaminase [Bacillus subtilis BSn5] gi|23396605|sp|O34598|GUAD_BACSU RecName: Full=Guanine deaminase; Short=GDEase; Short=Guanase; Short=Guanine aminase; AltName: Full=Guanine aminohydrolase; Short=GAH gi|2632037|emb|CAA05596.1| YkoA [Bacillus subtilis] gi|2633671|emb|CAB13174.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. 168] gi|291483843|dbj|BAI84918.1| guanine deaminase [Bacillus subtilis subsp. natto BEST195] gi|320021343|gb|ADV96329.1| guanine deaminase [Bacillus subtilis BSn5] Length = 156 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 44/80 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + II+ N D TAHAE+ AIR C++L L + LY + EPC Sbjct: 25 PFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQLDDCILYTSCEPCP 84 Query: 85 MCAAAISLARIRRLYYGASN 104 MC AI AR + ++Y A + Sbjct: 85 MCLGAIYWARPKAVFYAAEH 104 >gi|116491296|ref|YP_810840.1| cytosine/adenosine deaminase [Oenococcus oeni PSU-1] gi|290890847|ref|ZP_06553913.1| hypothetical protein AWRIB429_1303 [Oenococcus oeni AWRIB429] gi|116092021|gb|ABJ57175.1| Cytosine/adenosine deaminase [Oenococcus oeni PSU-1] gi|290479498|gb|EFD88156.1| hypothetical protein AWRIB429_1303 [Oenococcus oeni AWRIB429] Length = 148 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 2/100 (2%) Query: 8 MSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+E+A +N L+ P GAV V + ++I A N D TAHAEI+AIR C++L Sbjct: 1 MKLAIEQANENIVLKEGGPFGAVIVRDQEVICAAHNMVLANLDPTAHAEIIAIRKACKVL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 + L + LY + PC MC +A A I+ + YG + PK Sbjct: 61 ATCDLSDCTLYTSAYPCPMCLSATIWANIKEVRYG-NTPK 99 >gi|293335013|ref|NP_001169897.1| hypothetical protein LOC100383791 [Zea mays] gi|224032231|gb|ACN35191.1| unknown [Zea mays] Length = 180 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 3/83 (3%) Query: 25 PVGAVAVL---NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 P GAV V +++++S + N R+ D +AHAE+ AIR C+ L + L ++Y + E Sbjct: 45 PFGAVVVHGGGDDEVVSSSHNSVRKDADPSAHAEVTAIRQACKKLGKTSLAGCEIYTSCE 104 Query: 82 PCTMCAAAISLARIRRLYYGASN 104 PC MC I LA+I+++ YGA + Sbjct: 105 PCPMCLGLIRLAKIKKVVYGAKS 127 >gi|224110294|ref|XP_002315474.1| predicted protein [Populus trichocarpa] gi|118483375|gb|ABK93588.1| unknown [Populus trichocarpa] gi|222864514|gb|EEF01645.1| predicted protein [Populus trichocarpa] Length = 186 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 42/97 (43%), Positives = 60/97 (61%), Gaps = 1/97 (1%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F++ A+EEA + P GAV VLN++++ N + D TAHAE+ AIR C+ Sbjct: 34 FLTKAVEEAYKGVDSGDGGPFGAVVVLNDEVVVACHNMVLKHTDPTAHAEVTAIREACKK 93 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L+Q L + ++Y + EPC MC AI L+RI+RL YGA Sbjct: 94 LNQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 130 >gi|323343460|ref|ZP_08083687.1| guanine deaminase [Prevotella oralis ATCC 33269] gi|323095279|gb|EFZ37853.1| guanine deaminase [Prevotella oralis ATCC 33269] Length = 156 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 44/92 (47%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV N +II+ A NR D TAHAE+ AIR R L L D+Y + EPC Sbjct: 25 PFGAVVARNGEIIAEASNRVTIDHDPTAHAEVNAIRKAARELDTFDLSGCDIYTSCEPCP 84 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC AI A + R+YY I F Sbjct: 85 MCLGAIYWAHLNRIYYANDRKDAARIGFDDDF 116 >gi|240168511|ref|ZP_04747170.1| hypothetical protein MkanA1_04312 [Mycobacterium kansasii ATCC 12478] Length = 152 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 69/129 (53%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80 ++P+GAV V + +SRA N L D TAHAEILA+R +L L L VT+ Sbjct: 22 DVPIGAVVVGADGTELSRAVNAREALGDPTAHAEILALRAAAAVLGDGWRLEGTTLAVTV 81 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ LAR+ RL +GA PK G + + +H P++ G+ Sbjct: 82 EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPQVRGGVLAADCAAP 141 Query: 141 IQDFFKERR 149 ++ FF +R Sbjct: 142 LEGFFARQR 150 >gi|148243600|ref|YP_001228757.1| nucleoside deaminase [Synechococcus sp. RCC307] gi|147851910|emb|CAK29404.1| Nucleoside deaminase [Synechococcus sp. RCC307] Length = 163 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 45/113 (39%), Positives = 58/113 (51%), Gaps = 8/113 (7%) Query: 7 FMSCALEEAQNAAL--RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM+ A+E ++ AL R+ P GAV V + +I+ GN D TAHAEI AIR R Sbjct: 10 FMAQAIEISRQTALEERSGEPFGAVIVRDGVVIAAEGNSVNGDSDPTAHAEINAIRAAGR 69 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 L L LY + C MC A A IR++YYGA G E+ + FY Sbjct: 70 ALGTWDLSGCVLYASSRCCPMCYGAAHWAGIRKIYYGA------GWEDYSDFY 116 >gi|116694743|ref|YP_728954.1| cytosine deaminase-related enzyme [Ralstonia eutropha H16] gi|113529242|emb|CAJ95589.1| cytosine deaminase-related enzyme [Ralstonia eutropha H16] Length = 155 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 53/92 (57%) Query: 16 QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75 +N RN P GAV V + ++++RA N+ D +AHAE+ A+R R L + L Sbjct: 17 ENVRERNTWPFGAVVVRDGEVLARAVNQVDATCDPSAHAEMQAVRAASRALGKPDLSGCT 76 Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 +Y + PC+MC +A+ LA ++ +YY SN G Sbjct: 77 VYASGYPCSMCLSAMYLAGVKAVYYAYSNEDG 108 >gi|218295213|ref|ZP_03496049.1| tRNA(Ile)-lysidine synthetase [Thermus aquaticus Y51MC23] gi|218244416|gb|EED10941.1| tRNA(Ile)-lysidine synthetase [Thermus aquaticus Y51MC23] Length = 509 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 53/146 (36%), Positives = 72/146 (49%), Gaps = 22/146 (15%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR--ELKDVTAHAEILAIR-MGC 63 M ALEEA+ A E+PVGAV VL ++ G RNR ++D TAHAE+L +R +G Sbjct: 377 LMGLALEEARKAYAEGEVPVGAVLVLEGEV---HGERNRVEAMEDPTAHAEMLLLRKLGK 433 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R LYVTLEPC MC A+ A + + YG N K G + Q Sbjct: 434 RARGGR------LYVTLEPCRMCHHALMEAGV-EVVYGVENLKEGALTRYGQ-------- 478 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 + G+ E ++++DFF R Sbjct: 479 -GGRMRGGLREGECAKLLRDFFARLR 503 >gi|152966037|ref|YP_001361821.1| CMP/dCMP deaminase zinc-binding [Kineococcus radiotolerans SRS30216] gi|151360554|gb|ABS03557.1| CMP/dCMP deaminase zinc-binding [Kineococcus radiotolerans SRS30216] Length = 161 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 3/131 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A+E A P GAV V ++++ NR D TAHAE+ AIR CR+ Sbjct: 12 FLERAVELATKNVAEGGGPFGAVLVRGGELLAAGQNRVTRDNDPTAHAEVQAIREACRLT 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG--GGIENGTQFYTLATCHH 124 L LY + EPC MC A+ AR+ R+ Y A GG ++ T FY L + Sbjct: 72 GTFSLHGTTLYSSCEPCPMCLASSLWARVDRVVYAADRDDAARGGFDDRT-FYELFSTDR 130 Query: 125 SPEIYPGISEQ 135 + P + ++ Sbjct: 131 ASWSTPVLQQE 141 >gi|189462876|ref|ZP_03011661.1| hypothetical protein BACCOP_03576 [Bacteroides coprocola DSM 17136] gi|189430492|gb|EDU99476.1| hypothetical protein BACCOP_03576 [Bacteroides coprocola DSM 17136] Length = 161 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/79 (44%), Positives = 44/79 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV N +II+ NR D TAHAE+ AIR +IL L ++Y + EPC Sbjct: 30 PFGAVIAKNGEIIAMGVNRVTPDCDPTAHAEVSAIRTAAKILGTFDLSGCEIYTSCEPCP 89 Query: 85 MCAAAISLARIRRLYYGAS 103 MC AI A + R+YYG S Sbjct: 90 MCLGAIYWAHLDRMYYGNS 108 >gi|321465150|gb|EFX76153.1| hypothetical protein DAPPUDRAFT_306296 [Daphnia pulex] Length = 171 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 18/153 (11%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A E A+ A E+PVG V L II NR E K+ T HAE+ AI Sbjct: 8 YMDRAFELAREALSVGEVPVGCVLHLEGYGIIGEGRNRVNETKNATRHAELEAIDSALLW 67 Query: 66 LSQ-------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + + ++ + +++V +EPC CA A+ + R+YYG SN + GG + Sbjct: 68 IKKNTSESYSQVFGKTEVWVNVEPCIQCAGALQILGFARVYYGCSNERFGGCGS-----V 122 Query: 119 LATCHHSP-----EIYPGISEQRSRQIIQDFFK 146 L C +I GI + ++++DF++ Sbjct: 123 LDVCEKDKRFQRLQIQGGIRANEAIELLKDFYR 155 >gi|221068800|ref|ZP_03544905.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] gi|220713823|gb|EED69191.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] Length = 164 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 51/83 (61%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + KI++RA N+ +L D TAHAE+ A+R+ + L L +Y + PC+ Sbjct: 30 PFGAVLVRDGKILARAVNQVDDLCDPTAHAEMQALRIAAKALGSTDLSGAVMYASGYPCS 89 Query: 85 MCAAAISLARIRRLYYGASNPKG 107 MC A+ LA ++++Y+ SN G Sbjct: 90 MCHTAMLLAGVKQVYFAYSNEDG 112 >gi|148643446|ref|YP_001273959.1| cytosine deaminase [Methanobrevibacter smithii ATCC 35061] gi|261349766|ref|ZP_05975183.1| cytosine deaminase [Methanobrevibacter smithii DSM 2374] gi|148552463|gb|ABQ87591.1| cytosine deaminase [Methanobrevibacter smithii ATCC 35061] gi|288860550|gb|EFC92848.1| cytosine deaminase [Methanobrevibacter smithii DSM 2374] Length = 158 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 1/101 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M F++ AL+EA+ + IP+GAV V + KIISR NR + V HAEI I Sbjct: 1 MYDDTYFINEALKEAKKSLAEGGIPIGAVLVKDGKIISRGHNRLIQNDSVILHAEIDTIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 R+ ++ L V LY TL PC MC+ AI L I ++ G Sbjct: 61 NAGRLNHEDYLQSV-LYTTLSPCPMCSGAILLYNIPKVIIG 100 >gi|160896585|ref|YP_001562167.1| CMP/dCMP deaminase [Delftia acidovorans SPH-1] gi|160362169|gb|ABX33782.1| CMP/dCMP deaminase zinc-binding [Delftia acidovorans SPH-1] Length = 171 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 1/101 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +++ A+ A A R P GA+ V + ++++ A N N E D TAHAE+ AIR Sbjct: 16 ERDGLYLRRAIAMADRARQRGNRPFGALIVAADGRVLAEASNANGESGDCTAHAELSAIR 75 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + +E L LY + EPC MCA AI + I R+ YG Sbjct: 76 LASPLHDREALSAATLYSSAEPCVMCAGAIFWSAIGRVVYG 116 >gi|282859465|ref|ZP_06268570.1| guanine deaminase [Prevotella bivia JCVIHMP010] gi|282587693|gb|EFB92893.1| guanine deaminase [Prevotella bivia JCVIHMP010] Length = 168 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 5/136 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+E + N+ P GAV N +I++ N+ D TAHAE+ IRM C+ L Sbjct: 19 LMRRAIELSINSVRNGGGPFGAVIARNGEIVAEGSNKVTIDNDPTAHAEVSTIRMACKKL 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L ++Y + EPC MC AI A + ++YY I F + Sbjct: 79 DSFDLSGCEIYTSCEPCPMCLGAIYWAHLDKIYYANDRKDAANIGFDDDF-----IYQEI 133 Query: 127 EIYPGISEQRSRQIIQ 142 E+ P ++ S ++Q Sbjct: 134 EVQPQYRKKPSEILLQ 149 >gi|152992774|ref|YP_001358495.1| cytidine/deoxycytidylate deaminase family protein [Sulfurovum sp. NBC37-1] gi|151424635|dbj|BAF72138.1| cytidine/deoxycytidylate deaminase family protein [Sulfurovum sp. NBC37-1] Length = 153 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/76 (47%), Positives = 43/76 (56%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + KII+ N + D TAHAE++AIR L L LYVT EPC Sbjct: 23 PFGAVIVKDGKIIASGHNEVVKTNDPTAHAEMIAIRNASAKLQNFKLEGCTLYVTGEPCP 82 Query: 85 MCAAAISLARIRRLYY 100 MC +AI A I R+YY Sbjct: 83 MCFSAIHWAHIERVYY 98 >gi|315305132|ref|ZP_07875140.1| cytidine/deoxycytidylate deaminase family protein [Listeria ivanovii FSL F6-596] gi|313626498|gb|EFR95623.1| cytidine/deoxycytidylate deaminase family protein [Listeria ivanovii FSL F6-596] Length = 81 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 45/73 (61%) Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136 YVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ E+ G+ E Sbjct: 1 YVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDDRFNHTCEVESGLMEAE 60 Query: 137 SRQIIQDFFKERR 149 S ++++ FF+E R Sbjct: 61 SSEMLKSFFQELR 73 >gi|209879105|ref|XP_002140993.1| cytidine/deoxycytidylate deaminase family protein [Cryptosporidium muris RN66] gi|209556599|gb|EEA06644.1| cytidine/deoxycytidylate deaminase family protein [Cryptosporidium muris RN66] Length = 189 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 20/160 (12%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL+ A A +EIPVG + V +I S A N + T H E++A+ Sbjct: 11 FMKEALKWATKAFDTDEIPVGCILVNRETKEIESAAHNETNISCNATRHCEVVALERLAD 70 Query: 65 ILSQEI--------------LPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 L QE+ PE DL+VT+EPC MC ++ A I+ +YYG N + Sbjct: 71 KLIQELDGINCKDINTKFPLKPEFGQYYDLFVTVEPCIMCIGILNQAGIKGIYYGCKNDR 130 Query: 107 GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 GG + F+ + + +I I + +++QDF++ Sbjct: 131 FGGCGSVIDFHDVIDINSEIQIKSNILADEAIKLLQDFYE 170 >gi|264677000|ref|YP_003276906.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] gi|262207512|gb|ACY31610.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] Length = 162 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 51/83 (61%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V N ++++RA N+ EL D +AHAE+ A+R+G + L +Y + PC+ Sbjct: 31 PFGAVLVRNGQVLARAVNQVDELCDPSAHAEMQALRIGAKAQGSTDLSGAVMYASGYPCS 90 Query: 85 MCAAAISLARIRRLYYGASNPKG 107 MC A+ LA ++++Y+ SN G Sbjct: 91 MCYTAMLLAGVKQVYFAYSNEDG 113 >gi|21228824|ref|NP_634746.1| hypothetical protein MM_2722 [Methanosarcina mazei Go1] gi|20907345|gb|AAM32418.1| hypothetical protein MM_2722 [Methanosarcina mazei Go1] Length = 161 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 55/106 (51%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 A+E + + R P GAV V N KI+S + N+ D TAHAEI AIR R L+ Sbjct: 16 AIELSLESVKRGGGPFGAVIVKNGKIVSESYNQVTLHNDPTAHAEIGAIREAARKLNTFD 75 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L +Y++ EPC MC AI ARI ++++ ++ I F Sbjct: 76 LSGCSIYISCEPCPMCLGAIYWARIDKVFFASTRSDAENIGFDDSF 121 >gi|254433467|ref|ZP_05046975.1| hypothetical protein NOC27_398 [Nitrosococcus oceani AFC27] gi|207089800|gb|EDZ67071.1| hypothetical protein NOC27_398 [Nitrosococcus oceani AFC27] Length = 93 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/75 (46%), Positives = 43/75 (57%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + +I+ RA N L+D TAHAE+ AIRM CR + L LY + EPC Sbjct: 19 PFGAVVVRDGEILGRACNDVIALRDPTAHAEVQAIRMACRNFNDFHLEGCALYCSCEPCP 78 Query: 85 MCAAAISLARIRRLY 99 MC A ARI +Y Sbjct: 79 MCLGAAYWARIGWIY 93 >gi|257052125|ref|YP_003129958.1| CMP/dCMP deaminase zinc-binding [Halorhabdus utahensis DSM 12940] gi|256690888|gb|ACV11225.1| CMP/dCMP deaminase zinc-binding [Halorhabdus utahensis DSM 12940] Length = 155 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 7/123 (5%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGA+ V N I++ E D TAH+EI IR C+ L E L LY T EPC M Sbjct: 34 VGALLVKNGDIVASGTGAIFERPDATAHSEIEVIREACQRLDSERLDGCWLYSTHEPCPM 93 Query: 86 CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA------TCHHSPEIYPGISEQRSRQ 139 C AA ARI + Y ++ + + GT F ++ +C H PE++ G + + Sbjct: 94 CTAACCWARIEGVVYALTD-EDMPADWGTIFSAVSAREIRDSCEHRPELHDGFMHAEATR 152 Query: 140 IIQ 142 ++ Sbjct: 153 LLH 155 >gi|237798885|ref|ZP_04587346.1| cytosine deaminase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021739|gb|EGI01796.1| cytosine deaminase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 145 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A EEAQ+ IP+G+V V + KII R NR + T H E+ A+ R Sbjct: 2 DAFMRAAFEEAQHGQEEGGIPIGSVIVHDGKIIGRGRNRRVQNASATLHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + E LY TL PC MC+ AI L IR++ G Sbjct: 62 -QPASVYREAVLYTTLSPCAMCSGAILLYGIRKVIVG 97 >gi|313635947|gb|EFS01887.1| tRNA-specific adenosine deaminase [Listeria seeligeri FSL S4-171] Length = 81 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 45/73 (61%) Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136 YVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ E+ G+ E Sbjct: 1 YVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDDRFNHTCEVESGLMEAE 60 Query: 137 SRQIIQDFFKERR 149 S ++++ FF+E R Sbjct: 61 SSEMLKSFFQELR 73 >gi|326315881|ref|YP_004233553.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372717|gb|ADX44986.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 169 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 1/96 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++ A+ A A R P GAV V ++ +++ A N N E D TAHAE AIR+ Sbjct: 19 YLRQAIALADKARARGNRPFGAVIVGDDGTVLAEAWNANGETGDCTAHAETSAIRVASPR 78 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 ++E+L LY + EPC MCA AI A I R+ YG Sbjct: 79 HAREVLARATLYSSGEPCVMCAGAIFWANIGRVVYG 114 >gi|324529700|gb|ADY49034.1| Guanine deaminase [Ascaris suum] Length = 153 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/101 (40%), Positives = 52/101 (51%), Gaps = 2/101 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A++EA Q + P GAV V NN II+ N + D TAHAEI AIR C Sbjct: 3 FMRKAIDEACQGVDNGDGGPFGAVIVRNNSIIATGHNMVLKTNDPTAHAEITAIRNACSA 62 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 L L LY + PC MC A +R+ +YY A+ P+ Sbjct: 63 LGTFDLSGCQLYTSCYPCPMCMGAALWSRVNAIYY-ATTPE 102 >gi|222445686|ref|ZP_03608201.1| hypothetical protein METSMIALI_01327 [Methanobrevibacter smithii DSM 2375] gi|222435251|gb|EEE42416.1| hypothetical protein METSMIALI_01327 [Methanobrevibacter smithii DSM 2375] Length = 158 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 1/101 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M F++ AL EA+ + IP+GAV V + KIISR NR + V HAEI I Sbjct: 1 MYDDTYFINEALNEAKKSLAEGGIPIGAVLVKDGKIISRGHNRLIQNDSVILHAEIDTIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 R+ ++ L V LY TL PC MC+ AI L I ++ G Sbjct: 61 NAGRLNHEDYLQSV-LYTTLSPCPMCSGAILLYNIPKVVIG 100 >gi|264677007|ref|YP_003276913.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] gi|262207519|gb|ACY31617.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] Length = 164 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 51/83 (61%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + K+++RA N+ +L D TAHAE+ A+R+ + L L +Y + PC+ Sbjct: 30 PFGAVLVRDGKVLARAVNQVDDLCDPTAHAEMQALRIAAKALGSTDLSGAVMYASGYPCS 89 Query: 85 MCAAAISLARIRRLYYGASNPKG 107 MC A+ LA ++++Y+ SN G Sbjct: 90 MCHTAMLLAGVKQVYFAYSNEDG 112 >gi|256423014|ref|YP_003123667.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588] gi|256037922|gb|ACU61466.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588] Length = 159 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A++ ++ + + P GA+ V +I+ R N+ D TAHAE++AIR C Sbjct: 9 FMQMAVDLSREGMEKGDGGPFGAIVVRGEEIVGRGWNQVLSFNDPTAHAEVVAIRDACAN 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L+ L + +++ + EPC MC AI AR +R+Y+ Sbjct: 69 LNTFQLHDCEIFTSCEPCPMCLGAIYWARPQRVYF 103 >gi|299532967|ref|ZP_07046354.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni S44] gi|298719191|gb|EFI60161.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni S44] Length = 166 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 1/92 (1%) Query: 11 ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A+ A A R P GA+ V + ++++RA N N E D TAHAE+ AIR+ + S++ Sbjct: 20 AIALADTARERGNRPFGALIVAADGRVLARASNANGESGDCTAHAELSAIRLASPLHSRD 79 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 L LY + EPC MCA AI + I R+ YG Sbjct: 80 ELAVATLYSSAEPCVMCAGAIFWSAIGRVVYG 111 >gi|320108633|ref|YP_004184223.1| Guanine deaminase [Terriglobus saanensis SP1PR4] gi|319927154|gb|ADV84229.1| Guanine deaminase [Terriglobus saanensis SP1PR4] Length = 161 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/77 (42%), Positives = 42/77 (54%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P G V V + ++I+ N D TAHAE+ AIR C L L D+Y + EPC Sbjct: 30 PFGCVIVRDGEVIAARANSVTATNDPTAHAEVNAIRAACAALGTFQLTGCDVYTSCEPCP 89 Query: 85 MCAAAISLARIRRLYYG 101 MC AAI AR R +Y+G Sbjct: 90 MCLAAIYWARCRSIYFG 106 >gi|120609775|ref|YP_969453.1| CMP/dCMP deaminase [Acidovorax citrulli AAC00-1] gi|120588239|gb|ABM31679.1| CMP/dCMP deaminase, zinc-binding protein [Acidovorax citrulli AAC00-1] Length = 169 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 52/96 (54%), Gaps = 1/96 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++ A+ A A R P GAV V + +++ A N N E D TAHAE AIR+ Sbjct: 19 YLRHAIALADKARARGNRPFGAVIVGGDGTVLAEAWNANGETGDCTAHAETSAIRVASPQ 78 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 ++E+L LY + EPC MCA AI A I R+ YG Sbjct: 79 HAREVLARATLYSSGEPCVMCAGAIFWANIGRVVYG 114 >gi|94263921|ref|ZP_01287724.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta proteobacterium MLMS-1] gi|94264246|ref|ZP_01288041.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta proteobacterium MLMS-1] gi|93455357|gb|EAT05561.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta proteobacterium MLMS-1] gi|93455666|gb|EAT05845.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta proteobacterium MLMS-1] Length = 184 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/165 (32%), Positives = 76/165 (46%), Gaps = 31/165 (18%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKII-------SRAGNRNRELKDVTA------- 52 +M AL+EA+ A E PVGA+ +++ SR D TA Sbjct: 8 WMGMALDEARGALAAGEFPVGAIIAHQGQMVASGRRQHSRGAAGPVAAPDTTATEVANEL 67 Query: 53 -HAEILAIRMGCRILSQEILPEVD-----LYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 HAE+LA+R ++LS+ P D LY TLEPC MC AA+ L +RR+ Y + Sbjct: 68 DHAEMLALR---QLLSRH--PTADRRGLTLYATLEPCLMCYAALLLNGVRRIVYAYEDAM 122 Query: 107 GGGIENGTQFYTLATCHH----SPEIYPGISEQRSRQIIQDFFKE 147 GGG G LA + + EI P + + S + + FF + Sbjct: 123 GGG--TGLPLAELAPLYRQMAPAVEIIPHLRRRESLALFKQFFND 165 >gi|295133748|ref|YP_003584424.1| guanine deaminase [Zunongwangia profunda SM-A87] gi|294981763|gb|ADF52228.1| guanine deaminase [Zunongwangia profunda SM-A87] Length = 158 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/92 (39%), Positives = 47/92 (51%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + +II+ N D TAHAEI AIR C L+ L LY + EPC Sbjct: 27 PFGAVVVKDGEIIAEGWNIVTSSNDPTAHAEITAIRRACENLNTFQLENCVLYTSCEPCP 86 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC AI AR ++++Y ++ I QF Sbjct: 87 MCLGAIYWARPKKVFYALNHSDAAKIGFDDQF 118 >gi|152988290|ref|YP_001348100.1| putative deaminase [Pseudomonas aeruginosa PA7] gi|150963448|gb|ABR85473.1| probable deaminase [Pseudomonas aeruginosa PA7] Length = 151 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 47/83 (56%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + ++++R N+ E D +AHAE+ AIR R+L L ++Y + PC Sbjct: 24 PFGAVLVRDGQVLARGVNQTHESHDPSAHAELQAIRQASRLLGSPRLDGCEIYASGHPCP 83 Query: 85 MCAAAISLARIRRLYYGASNPKG 107 MC AA+ L IR ++ SN G Sbjct: 84 MCLAAMHLCGIRAAWFAYSNEDG 106 >gi|198426798|ref|XP_002125101.1| PREDICTED: similar to deaminase domain containing 1 [Ciona intestinalis] Length = 178 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 19/160 (11%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M+ A A++A E+PVG V V NK +S N+ E K+ T HAE++AI + Sbjct: 9 WMNEAFNYAEDALKEGEVPVGCVLVYKNKEKLSNGRNKVNETKNATRHAELVAIDNAIKT 68 Query: 66 LSQE--------------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 ++ + + +YVT+EPC MC A+ +I + +G +N + GG Sbjct: 69 VTSDSWKQSLPNDWKFTDVFEHCVMYVTVEPCIMCCGAMRAMKIPLVVFGCNNERFGGCG 128 Query: 112 NGTQFYTLATCHHS--PEI--YPGISEQRSRQIIQDFFKE 147 + ++ + S P I Y G R+ +++DF+K+ Sbjct: 129 SVLSLHSNRKLNSSLGPVISTYGGQQTVRAITLLKDFYKQ 168 >gi|162451647|ref|YP_001614014.1| cytidine/deoxycytidylate deaminase [Sorangium cellulosum 'So ce 56'] gi|161162229|emb|CAN93534.1| Cytidine/deoxycytidylate deaminase [Sorangium cellulosum 'So ce 56'] Length = 151 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 2/104 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M + M ALE A+ A E P GA VA + +++ A + +D T HAE+ A+ Sbjct: 1 MSRDEALMGRALELARGAQRAGEPPFGALVAAPDGAVVAEATDEVNAQRDFTWHAEVGAV 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 R C + + L LY T+EPC MC A LARI R+ YG + Sbjct: 61 RRACAAVGPD-LQGYTLYTTVEPCPMCFTAAWLARISRIVYGCT 103 >gi|294674240|ref|YP_003574856.1| guanine deaminase [Prevotella ruminicola 23] gi|294472550|gb|ADE81939.1| guanine deaminase [Prevotella ruminicola 23] Length = 158 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 53/110 (48%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ A + R P GAV V + +II+ + N D TAHAE+ IR C L Sbjct: 9 FMREAIRLANESVERGGGPFGAVIVKDGEIIAGSSNSVTIDNDPTAHAEVNTIRKACFKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L +Y + EPC MC AI ARI +++YG + I+ F Sbjct: 69 RTFDLSGCTIYTSCEPCPMCLGAIYWARIGKIFYGNTRKDARDIQFADDF 118 >gi|300727400|ref|ZP_07060809.1| cytidine/deoxycytidylate deaminase family protein [Prevotella bryantii B14] gi|299775280|gb|EFI71879.1| cytidine/deoxycytidylate deaminase family protein [Prevotella bryantii B14] Length = 155 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 51/110 (46%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ ++N+ P GAV V + +I++ A N D TAHAEI IR +IL Sbjct: 6 FMRRAIALSENSVKTGGGPFGAVIVKDGEIVAEASNSVTIDNDPTAHAEINCIRKATKIL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L D+Y + EPC MC AI A + +YY I F Sbjct: 66 KSFDLAGCDIYTSCEPCPMCLGAIYWAHLDHIYYANDRKDAAKIGFDDDF 115 >gi|299532573|ref|ZP_07045963.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni S44] gi|298719520|gb|EFI60487.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni S44] Length = 164 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 51/83 (61%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + K+++RA N+ +L D TAHAE+ A+R+ + L L +Y + PC+ Sbjct: 30 PFGAVLVRDGKVLARAVNQVDDLCDPTAHAEMQALRIAAKALGSTDLSGSVMYASGYPCS 89 Query: 85 MCAAAISLARIRRLYYGASNPKG 107 MC A+ LA ++++Y+ SN G Sbjct: 90 MCHTAMLLAGVKQVYFAYSNEDG 112 >gi|325279197|ref|YP_004251739.1| Guanine deaminase [Odoribacter splanchnicus DSM 20712] gi|324311006|gb|ADY31559.1| Guanine deaminase [Odoribacter splanchnicus DSM 20712] Length = 156 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/80 (43%), Positives = 43/80 (53%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V KII+ N D TAHAE+ AIR CR L L ++Y + EPC Sbjct: 25 PFGAVVVKEGKIIAACANTVTPDCDPTAHAEVNAIREACRKLDTFQLGGCEIYASCEPCP 84 Query: 85 MCAAAISLARIRRLYYGASN 104 MC AI AR R+YY ++ Sbjct: 85 MCLGAIYWARPSRVYYASTK 104 >gi|119394655|gb|ABL74489.1| putative cytidine deaminase [Zea mays] gi|119394657|gb|ABL74490.1| putative cytidine deaminase [Zea mays] Length = 186 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 1/101 (0%) Query: 3 KGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K + F++ A+EEA + + P GAV V N++++ N + D TAHAE+ AIR Sbjct: 30 KDHKFLTKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIRE 89 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 C+ L + L + ++Y + EPC MC A+ L+RI+RL YGA Sbjct: 90 ACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGA 130 >gi|83815475|ref|YP_446616.1| putative cytidine and deoxycytidylate deaminase [Salinibacter ruber DSM 13855] gi|83756869|gb|ABC44982.1| putative cytidine and deoxycytidylate deaminase [Salinibacter ruber DSM 13855] Length = 221 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 1/96 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A++EA +A P GAV V ++ RAGN D T HAE +R + Sbjct: 76 FVRAAIDEAGSAQDAGNPPFGAVLVGPGGTVLDRAGNTEGRTGDCTGHAETNLVRAASQE 135 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E L + LY + EPC MCA AI ARI R+ +G Sbjct: 136 YDPERLAKATLYASTEPCAMCAGAIFWARIGRVVFG 171 >gi|260909908|ref|ZP_05916596.1| guanine deaminase [Prevotella sp. oral taxon 472 str. F0295] gi|260635953|gb|EEX53955.1| guanine deaminase [Prevotella sp. oral taxon 472 str. F0295] Length = 155 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 45/92 (48%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV N +I++ A NR D TAHAE+ AIR+ R L L D+Y + EPC Sbjct: 24 PFGAVIARNGEIVAEAANRVTLDHDPTAHAEVSAIRLASRKLGTFNLSGCDIYTSCEPCP 83 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC AI A + +YY + I F Sbjct: 84 MCLGAIYWAHLDNIYYANNREDAANIGFDDDF 115 >gi|296329638|ref|ZP_06872123.1| guanine deaminase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674035|ref|YP_003865707.1| guanine deaminase [Bacillus subtilis subsp. spizizenii str. W23] gi|296153136|gb|EFG94000.1| guanine deaminase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412279|gb|ADM37398.1| guanine deaminase [Bacillus subtilis subsp. spizizenii str. W23] Length = 156 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 43/80 (53%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA+ V + II+ N D TAHAE+ AIR C+ L L + LY + EPC Sbjct: 25 PFGALIVKDGSIIAEGQNNVTTSNDPTAHAEVTAIRNACKALGTFQLDDCILYTSCEPCP 84 Query: 85 MCAAAISLARIRRLYYGASN 104 MC AI AR + +YY A + Sbjct: 85 MCLGAIYWARPKAVYYAAEH 104 >gi|29830136|ref|NP_824770.1| hypothetical protein SAV_3593 [Streptomyces avermitilis MA-4680] gi|29607246|dbj|BAC71305.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 151 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 49/90 (54%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74 A+ AA +GAV + ++I ++G++ + D T H EI AIR L LP+ Sbjct: 8 AREAATTGNYALGAVVIKGGQVIGKSGSKLVQGNDPTGHPEITAIRQAAERLGSRYLPDA 67 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L TLEPC MC +A A++R + YGA+ Sbjct: 68 YLVTTLEPCPMCTSAAIWAKMRGIAYGATQ 97 >gi|332185432|ref|ZP_08387180.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Sphingomonas sp. S17] gi|332014410|gb|EGI56467.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Sphingomonas sp. S17] Length = 164 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 46/78 (58%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P+G V V ++++ N+ EL D TAHAE++AIR C + L + LY TL+PC Sbjct: 28 PLGCVIVRGGQVLAAERNQTHELPDATAHAEMMAIRRACESVGDLELRDATLYSTLQPCG 87 Query: 85 MCAAAISLARIRRLYYGA 102 MC A +++ R+ YGA Sbjct: 88 MCTMASIWSKVGRVVYGA 105 >gi|189218057|ref|YP_001938699.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4] gi|189184915|gb|ACD82100.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4] Length = 168 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 3/122 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +K N ++ AL+ AQ + + E P GAV VL + I A N D TAHAEILAI+ Sbjct: 13 EKHNYWLRLALKLAQYGSEQGEGGPFGAVVVLQEEAIGLAHNEVLSRLDPTAHAEILAIQ 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKGGGIENGTQFYT 118 + +S L +Y + EPC MC +AI A I ++YY G + +G G + + Sbjct: 73 RAAKKISHFDLEGSIIYTSCEPCPMCLSAIYWAGISKVYYACGKEDVQGIGFRDAFLYEE 132 Query: 119 LA 120 L Sbjct: 133 LG 134 >gi|255075667|ref|XP_002501508.1| cytidine/deoxycytidylate deaminase family protein [Micromonas sp. RCC299] gi|226516772|gb|ACO62766.1| cytidine/deoxycytidylate deaminase family protein [Micromonas sp. RCC299] Length = 164 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 3/86 (3%) Query: 22 NEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS-QEILPEVDLYV 78 +E+PVGAV V + K++S N D TAHAE+ +R G ++L L + LYV Sbjct: 15 DEVPVGAVLVHTASGKVLSSHHNTVLAQDDPTAHAEMKCVRDGAKVLGGWRYLRDATLYV 74 Query: 79 TLEPCTMCAAAISLARIRRLYYGASN 104 TLEPC MCA A+ AR+ + +GA N Sbjct: 75 TLEPCPMCAGAVLNARLGAVVWGAPN 100 >gi|91201071|emb|CAJ74129.1| strongly similar to fungal cytosine deaminase [Candidatus Kuenenia stuttgartiensis] Length = 145 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 12/140 (8%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+EEA+ L IP+G+V V + +II R N+ + + AHAEI + R+ Sbjct: 4 FMRTAIEEAKQGLLEGGIPIGSVLVKDGEIIGRGHNKRVQENNPIAHAEIDCLVNSGRVG 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LY TL PC +CA AI RI+++ G S G E F L H Sbjct: 64 K---YSGTTLYSTLMPCYLCAGAIVQFRIKKIVVGESETFSGAKE----FMEL----HGV 112 Query: 127 EIYPGISEQRSRQIIQDFFK 146 EI ++ + +Q+++DF + Sbjct: 113 EIID-LNIEECKQLMKDFIQ 131 >gi|50365494|ref|YP_053919.1| cytosine deaminase [Mesoplasma florum L1] gi|50364050|gb|AAT76035.1| cytosine deaminase [Mesoplasma florum L1] Length = 142 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 11/131 (8%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 +IPV + + +NKI+ ++ N + ++K +T HAEI + + + + L E L+ TLEP Sbjct: 19 DIPVFSCLIKDNKIVFKSKNNSYKIKKITGHAEINVMNKAFKKIKKGNLSEYTLFTTLEP 78 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQF----YTLATCHHSPEIYPGISEQRSR 138 C MC AI A+I+ + Y N K N + H + + + Sbjct: 79 CLMCYGAIKQAKIKEIIYLTENVK-LSFRNDVNIDQIKINIRKLDHEE------LQSKYQ 131 Query: 139 QIIQDFFKERR 149 +II DFF+++R Sbjct: 132 KIISDFFQKKR 142 >gi|221068807|ref|ZP_03544912.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] gi|220713830|gb|EED69198.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] Length = 162 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 51/83 (61%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + +I++RA N+ EL D +AHAE+ A+R+G + L +Y + PC+ Sbjct: 31 PFGAVLVRDGQILARAVNQVDELCDPSAHAEMQALRIGAKAQGSTDLSGAVMYASGYPCS 90 Query: 85 MCAAAISLARIRRLYYGASNPKG 107 MC A+ LA ++++Y+ SN G Sbjct: 91 MCYTAMLLAGVKQVYFAYSNEDG 113 >gi|115955248|ref|XP_001190079.1| PREDICTED: similar to DEADC1 protein [Strongylocentrotus purpuratus] Length = 108 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 6/92 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A+ A R E+PVG + V ++II GN E K+ T HAEILA+ R Sbjct: 12 WMKEAVNMAKQALGRGEVPVGCLLVYEDQIIGTGGNAANETKNATRHAEILALEEAMRWC 71 Query: 67 SQ------EILPEVDLYVTLEPCTMCAAAISL 92 E+ + L+VT+EPC MCA A+ + Sbjct: 72 DDKQLERGELFSQTKLFVTVEPCIMCAGALRI 103 >gi|27381264|ref|NP_772793.1| hypothetical protein blr6153 [Bradyrhizobium japonicum USDA 110] gi|27354431|dbj|BAC51418.1| blr6153 [Bradyrhizobium japonicum USDA 110] Length = 159 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 53/105 (50%), Gaps = 1/105 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ + A+ + P G V V + K++ N D TAHAE LA CR Sbjct: 9 FLRLSFAVARRSLTHGNHPFGCVVVAADGKVLIETENGYMPDCDGTAHAERLAATQACRT 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 LS+E+L E LY + EPC MCA AI A I R+ YG S + G+ Sbjct: 69 LSREVLAEATLYSSAEPCAMCAGAIYWAGIGRVVYGLSEHRLRGV 113 >gi|330942469|gb|EGH45066.1| cytosine deaminase [Pseudomonas syringae pv. pisi str. 1704B] Length = 145 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 49/97 (50%), Gaps = 1/97 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL+EAQ IP+G+V V KII R NR + T H EI A+ R Sbjct: 2 DAFMQAALDEAQLGLKEGGIPIGSVIVHGGKIIGRGHNRRVQEGSATKHGEIDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + LY TL PC MC+ AI L IR++ G Sbjct: 62 -QPASVYRDSVLYTTLSPCAMCSGAILLYGIRKVIIG 97 >gi|297622621|ref|YP_003704055.1| CMP/dCMP deaminase zinc-binding protein [Truepera radiovictrix DSM 17093] gi|297163801|gb|ADI13512.1| CMP/dCMP deaminase zinc-binding protein [Truepera radiovictrix DSM 17093] Length = 153 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 8/137 (5%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74 A A R + GAV V +++ A N + +D +AHAE+ IR CR L L Sbjct: 19 AAEVAERGQTMFGAVLVRGGALLAEAANTVAKDRDPSAHAELSLIRRACRELVTTDLDGC 78 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT------CHHSPEI 128 LY T+EPC MCAAA + + + +GAS + E G L+ H+P + Sbjct: 79 TLYTTVEPCPMCAAACVWSGVSGVVFGASIAEVA--ELGVPQIALSCEELFGRVQHAPTL 136 Query: 129 YPGISEQRSRQIIQDFF 145 G+ +R ++ Q F+ Sbjct: 137 RGGVERERCLELCQRFW 153 >gi|115713119|ref|XP_781669.2| PREDICTED: similar to DEADC1 protein, partial [Strongylocentrotus purpuratus] Length = 104 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 6/92 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A+ A R E+PVG + V ++II GN E K+ T HAEILA+ R Sbjct: 12 WMKEAVNMAKQALGRGEVPVGCLLVYEDQIIGTGGNAANETKNATRHAEILALEEAMRWC 71 Query: 67 SQ------EILPEVDLYVTLEPCTMCAAAISL 92 E+ + L+VT+EPC MCA A+ + Sbjct: 72 DDKQLERGELFSQTKLFVTVEPCIMCAGALRI 103 >gi|294508554|ref|YP_003572613.1| Conserved hypothetical protein containing cytidine and deoxycytidylate deaminase zinc-binding protein [Salinibacter ruber M8] gi|294344883|emb|CBH25661.1| Conserved hypothetical protein containing cytidine and deoxycytidylate deaminase zinc-binding protein [Salinibacter ruber M8] Length = 158 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 1/96 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A++EA +A P GAV V ++ RAGN D T HAE +R + Sbjct: 13 FVRAAIDEAASAQDAGNPPFGAVLVGPGGTVLDRAGNTEGRTGDCTGHAETNLVRAASQE 72 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E L + LY + EPC MCA AI ARI R+ +G Sbjct: 73 YDPERLAKATLYASTEPCAMCAGAIFWARIGRVVFG 108 >gi|187780095|ref|ZP_02996568.1| hypothetical protein CLOSPO_03691 [Clostridium sporogenes ATCC 15579] gi|187773720|gb|EDU37522.1| hypothetical protein CLOSPO_03691 [Clostridium sporogenes ATCC 15579] Length = 157 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/79 (41%), Positives = 45/79 (56%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P G+ V + K+I+ A N D TAH E+ AIR C+ L+ L +LY T EPC Sbjct: 25 PFGSAIVKDGKVIAVAHNTVIGDNDPTAHGEVNAIRQACKKLNTFDLSGCELYTTSEPCP 84 Query: 85 MCAAAISLARIRRLYYGAS 103 MC +AI A I ++YYG + Sbjct: 85 MCMSAIIWANISKVYYGCT 103 >gi|303237160|ref|ZP_07323730.1| guanine deaminase [Prevotella disiens FB035-09AN] gi|302482547|gb|EFL45572.1| guanine deaminase [Prevotella disiens FB035-09AN] Length = 155 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 50/110 (45%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+E ++N+ P GAV + +II+ NR D TAHAE+ IR C L Sbjct: 6 LMRRAIELSENSVRNGGGPFGAVIAKDGEIIAEGSNRVTIDNDPTAHAEVCTIRKACEKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L +Y + EPC MC AI A + ++YY G I F Sbjct: 66 GTFDLKGCVIYTSCEPCPMCFGAIYWAHLEKIYYANDRKDAGKIGFDDDF 115 >gi|255641124|gb|ACU20840.1| unknown [Glycine max] Length = 168 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/97 (43%), Positives = 60/97 (61%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F++ A+EEA + + P GAV VLN++++ N D TAHAE+ AIR C+ Sbjct: 41 FLTKAVEEAYKGVECGDGGPFGAVVVLNDEVVVSCHNMVLRNTDPTAHAEVTAIREACQK 100 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L+Q L + ++Y + EPC MC AI L+RI+RL YGA Sbjct: 101 LNQIELADCEIYASCEPCPMCFGAIHLSRIKRLVYGA 137 >gi|55981511|ref|YP_144808.1| cell cycle protein MesJ [Thermus thermophilus HB8] gi|61217197|sp|Q5SI38|TILS_THET8 RecName: Full=tRNA(Ile)-lysidine synthase; AltName: Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName: Full=tRNA(Ile)-lysidine synthetase gi|55772924|dbj|BAD71365.1| probable cell cycle protein MesJ [Thermus thermophilus HB8] Length = 507 Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 50/130 (38%), Positives = 69/130 (53%), Gaps = 22/130 (16%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD---LYVT 79 E+PVGAV VL +++ RA NR L+D TAHAE+L +R E PE LYVT Sbjct: 391 EVPVGAVLVLPGRVL-RAHNRVEGLRDPTAHAEMLLLR--------EAGPEARGGRLYVT 441 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MC A++ A + + YGA N K G + + L T G+ E+ + Sbjct: 442 LEPCLMCHHALAQAGV-EVVYGAENLKEGALTR----FGLPT-----RARGGVRERECAK 491 Query: 140 IIQDFFKERR 149 +++DFF R Sbjct: 492 LLRDFFARLR 501 >gi|46199478|ref|YP_005145.1| putative cell cycle protein mesJ-like protein [Thermus thermophilus HB27] gi|61217297|sp|Q72IF6|TILS_THET2 RecName: Full=tRNA(Ile)-lysidine synthase; AltName: Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName: Full=tRNA(Ile)-lysidine synthetase gi|46197104|gb|AAS81518.1| putative cell cycle protein mesJ-like protein [Thermus thermophilus HB27] Length = 507 Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 50/130 (38%), Positives = 69/130 (53%), Gaps = 22/130 (16%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD---LYVT 79 E+PVGAV VL +++ RA NR L+D TAHAE+L +R E PE LYVT Sbjct: 391 EVPVGAVLVLPGRVL-RAHNRVEGLRDPTAHAEMLLLR--------EAGPEARGGRLYVT 441 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MC A++ A + + YGA N K G + + L T G+ E+ + Sbjct: 442 LEPCLMCHHALAQAGV-EVVYGAENLKEGALTR----FGLPT-----RARGGVRERECAK 491 Query: 140 IIQDFFKERR 149 +++DFF R Sbjct: 492 LLRDFFARLR 501 >gi|182416349|ref|YP_001821415.1| CMP/dCMP deaminase zinc-binding [Opitutus terrae PB90-1] gi|177843563|gb|ACB77815.1| CMP/dCMP deaminase zinc-binding [Opitutus terrae PB90-1] Length = 183 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 46/92 (50%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P G V V +I++R NR D TAHAE+ AIR + L L + +LY + EPC Sbjct: 52 PFGCVIVRRGEIVARGQNRVTSTNDPTAHAEVTAIREAAQRLGTFQLGDCELYTSCEPCP 111 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC +AI ARI +YY + I F Sbjct: 112 MCLSAIYWARIPTVYYANTRKDAAAIGFDDDF 143 >gi|297570280|ref|YP_003691624.1| Guanine deaminase [Desulfurivibrio alkaliphilus AHT2] gi|296926195|gb|ADH87005.1| Guanine deaminase [Desulfurivibrio alkaliphilus AHT2] Length = 156 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 58/129 (44%), Gaps = 13/129 (10%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P A+ V +++II R NR D TAHAE+ AIR C + L LYV EPC Sbjct: 25 PFAALVVRDHEIIGRGWNRVTSANDPTAHAEVEAIRAACAQVGDFSLAGCTLYVNCEPCP 84 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY--PGISEQRSRQIIQ 142 MC AA A I ++YY A I A H E+ P +RQ+++ Sbjct: 85 MCLAAAYWAGIEQIYYAADRHDAAAI-------GFADLHIYEELTRPPAKRSIPTRQLLR 137 Query: 143 D----FFKE 147 D FKE Sbjct: 138 DKALPLFKE 146 >gi|222624837|gb|EEE58969.1| hypothetical protein OsJ_10660 [Oryza sativa Japonica Group] Length = 169 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 65/134 (48%), Gaps = 23/134 (17%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+A+ A E+PVG V V + K T HAE+ AI + R Sbjct: 8 FMELALEQAKFALDNLEVPVGCVIVEDGK--------------ATRHAEMEAIDILLREW 53 Query: 67 SQEIL--PEV-------DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 L P+V DLYVT EPC MCA A+S+ IR +Y+G +N K GG + + Sbjct: 54 QGMGLDQPQVAEKFARCDLYVTCEPCIMCAMALSILGIREVYFGCANDKFGGCGSIMSLH 113 Query: 118 TLATCHHSPEIYPG 131 ++ S E PG Sbjct: 114 QSSSAELSGEEIPG 127 >gi|299531573|ref|ZP_07044979.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni S44] gi|298720536|gb|EFI61487.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni S44] Length = 162 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 51/83 (61%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + ++++RA N+ EL D +AHAE+ A+R+G + L +Y + PC+ Sbjct: 31 PFGAVLVRDGQVLARAVNQVDELCDPSAHAEMQALRIGAKAQGSTDLSGAVMYASGYPCS 90 Query: 85 MCAAAISLARIRRLYYGASNPKG 107 MC A+ LA ++++Y+ SN G Sbjct: 91 MCYTAMLLAGVKQVYFAYSNEDG 113 >gi|158523013|ref|YP_001530883.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3] gi|158511839|gb|ABW68806.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3] Length = 168 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 14/148 (9%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIIS---RAGNRNRELKDVTAHAEILAIRMGC 63 FM+ AL++A+ A E PVG V +++ R G R + T HAEI+A+R Sbjct: 6 FMTIALKQARQALDAGEFPVGCVIADGKTVVATGARQGTRQNRFNE-TDHAEIVALR--- 61 Query: 64 RILSQEILPE---VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + + P+ + LY TLEPC MC AI + I ++ YG + GGG G L Sbjct: 62 NLATLDPAPDRAGLVLYSTLEPCLMCFGAILIHGISKIVYGCEDMMGGG--TGCDLSALP 119 Query: 121 TCHHSP--EIYPGISEQRSRQIIQDFFK 146 + EI G+ +S + + FF+ Sbjct: 120 PLYREKRVEILAGVMRAQSLALFKAFFQ 147 >gi|264680472|ref|YP_003280382.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] gi|262210988|gb|ACY35086.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] Length = 166 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 1/96 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++ A+ A A R P GA+ V + ++++RA N N E D TAHAE+ AIR+ + Sbjct: 16 YLREAIALADTARERGNRPFGALIVAADGRVLARASNANGESGDCTAHAELSAIRLASPL 75 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 S+ L LY + EPC MCA AI + I R+ YG Sbjct: 76 HSRGELAVATLYSSAEPCVMCAGAIFWSAIGRVVYG 111 >gi|209886320|ref|YP_002290177.1| cytidine/deoxycytidylate deaminase family protein [Oligotropha carboxidovorans OM5] gi|209874516|gb|ACI94312.1| cytidine/deoxycytidylate deaminase family protein [Oligotropha carboxidovorans OM5] Length = 154 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 52/107 (48%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M F+ A+E A+N P GAV V + K+I+ N D T HAE+ AIR Sbjct: 1 MSDTERFLCEAIELARNNVRNGGRPFGAVLVKDGKVIATGVNEIGATGDPTTHAELQAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 R+L L +Y + PC MC AA+ L IR L Y SN +G Sbjct: 61 AASRVLGTPRLDGCIVYASGHPCPMCLAAMHLTGIRELAYAYSNDEG 107 >gi|195623500|gb|ACG33580.1| cytidine/deoxycytidylate deaminase family protein [Zea mays] Length = 186 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F++ A+EEA + + P GAV V N++++ N + D TAHAE+ AIR C+ Sbjct: 34 FLTKAVEEAYRGVDCGDGGPFGAVVVCNDEVVVSCHNMVLKHTDPTAHAEVTAIREACKK 93 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L + L + ++Y + EPC MC +A+ L+RI+RL YGA Sbjct: 94 LGKIELSDCEIYASCEPCPMCFSAVHLSRIKRLVYGA 130 >gi|218199364|gb|EEC81791.1| hypothetical protein OsI_25504 [Oryza sativa Indica Group] gi|222636744|gb|EEE66876.1| hypothetical protein OsJ_23692 [Oryza sativa Japonica Group] Length = 186 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F++ A+EEA + + P GAV V N++++ N + D TAHAE+ AIR C+ Sbjct: 34 FLTKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIREACKK 93 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L + L + ++Y + EPC MC A+ L+RI+RL YGA Sbjct: 94 LGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGA 130 >gi|115471365|ref|NP_001059281.1| Os07g0245100 [Oryza sativa Japonica Group] gi|113610817|dbj|BAF21195.1| Os07g0245100 [Oryza sativa Japonica Group] Length = 186 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F++ A+EEA + + P GAV V N++++ N + D TAHAE+ AIR C+ Sbjct: 34 FLTKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIREACKK 93 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L + L + ++Y + EPC MC A+ L+RI+RL YGA Sbjct: 94 LGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGA 130 >gi|242043474|ref|XP_002459608.1| hypothetical protein SORBIDRAFT_02g007460 [Sorghum bicolor] gi|241922985|gb|EER96129.1| hypothetical protein SORBIDRAFT_02g007460 [Sorghum bicolor] Length = 186 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 1/97 (1%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F++ A+EEA + P GAV V N++++ N + D TAHAE+ AIR C+ Sbjct: 34 FLTKAVEEAYRGVDNGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIREACKK 93 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L + L + ++Y + EPC MC A+ L+RI+RL YGA Sbjct: 94 LGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGA 130 >gi|328872297|gb|EGG20664.1| adenosine deaminase [Dictyostelium fasciculatum] Length = 307 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 52/195 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 ++K + +M A+E+ A E+PVG V V N +I+R N+ K+ T HAEI A+ Sbjct: 68 IEKHSKYMRLAIEQGYIALNEGEVPVGCVIVHRNGTVIARGFNKTNIKKNATRHAEIEAL 127 Query: 60 RM---------------------------------------------GCRILSQEILPEV 74 G I S+++L E Sbjct: 128 DSIYLDNVNNYNNNNNNNNNNNNNNNNNNNNNNNNNNNGHHQHVDLNGIDIHSEDLLSEC 187 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTLATC---HHSPEIYP 130 LYVT+EPC MCAA + L++I +Y+G N K GG NG+ ATC H Sbjct: 188 TLYVTVEPCIMCAAILQLSKIGMVYFGCYNDKFGG--NGSILPIHNATCVENGHPYNCVS 245 Query: 131 GISEQRSRQIIQDFF 145 G+ + + ++Q F+ Sbjct: 246 GLLKDEAVYLLQKFY 260 >gi|50513754|pdb|1TIY|A Chain A, X-Ray Structure Of Guanine Deaminase From Bacillus Subtilis Northeast Structural Genomics Consortium Target Sr160 gi|50513755|pdb|1TIY|B Chain B, X-Ray Structure Of Guanine Deaminase From Bacillus Subtilis Northeast Structural Genomics Consortium Target Sr160 Length = 164 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 43/80 (53%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + II+ N D TAHAE+ AIR C++L L + LY + EPC Sbjct: 25 PFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQLDDCILYTSCEPCP 84 Query: 85 MCAAAISLARIRRLYYGASN 104 C AI AR + ++Y A + Sbjct: 85 XCLGAIYWARPKAVFYAAEH 104 >gi|71907361|ref|YP_284948.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Dechloromonas aromatica RCB] gi|71846982|gb|AAZ46478.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Dechloromonas aromatica RCB] Length = 157 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 55/111 (49%), Gaps = 1/111 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M + F++ A+E A+ + E P GAV V + +II+ NR D TAHAEI AI Sbjct: 1 MNPDDQFLARAIELARQGSESGEGGPFGAVIVRDGRIIAEGWNRVVASHDPTAHAEIGAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 R C L LY + EPC MC +A ARI R+ + S + I Sbjct: 61 RTACAGQDHFHLHGCTLYASSEPCPMCLSAAYWARIERIVFANSRAEAAAI 111 >gi|85118833|ref|XP_965519.1| hypothetical protein NCU01888 [Neurospora crassa OR74A] gi|28927329|gb|EAA36283.1| predicted protein [Neurospora crassa OR74A] Length = 674 Score = 64.7 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 45/151 (29%), Positives = 66/151 (43%), Gaps = 51/151 (33%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+ A+ A NE PVG V V +++I+R N ++ T HAE++AI C +L Sbjct: 333 FMREALDMARLALKTNETPVGCVLVYKDRVIARGMNATNVSRNGTRHAELMAI---CALL 389 Query: 67 S------------------------------------------------QEILPEVDLYV 78 S + ++ E LYV Sbjct: 390 SYSGDADLEPKNVQPQCNHDEPSVWGDVDPRDGHLFPYGQKLHPAPRVDRSVISECTLYV 449 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 T+EPC MCA+ + RI+++Y+GA N K GG Sbjct: 450 TVEPCVMCASLLRQLRIKKVYFGAVNDKFGG 480 >gi|289618605|emb|CBI54849.1| unnamed protein product [Sordaria macrospora] Length = 681 Score = 64.7 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 45/151 (29%), Positives = 66/151 (43%), Gaps = 51/151 (33%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+ A+ A NE PVG V V +++I+R N ++ T HAE++AI C +L Sbjct: 339 FMREALDMARLALKTNETPVGCVLVYKDRVIARGMNATNVSRNGTRHAELMAI---CALL 395 Query: 67 S------------------------------------------------QEILPEVDLYV 78 S + ++ E LYV Sbjct: 396 SYSGDADLEPKNAQHQCNHDEPSFWGDVDPRDGHLFPYGQKLHPAPRVDRSVVSECTLYV 455 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 T+EPC MCA+ + RI+++Y+GA N K GG Sbjct: 456 TVEPCVMCASLLRQLRIKKVYFGAVNDKFGG 486 >gi|323454898|gb|EGB10767.1| hypothetical protein AURANDRAFT_22290 [Aureococcus anophagefferens] Length = 172 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 11/142 (7%) Query: 11 ALEEAQNA-ALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 ALE A++A A + E+PVG V V +N + I+ A N E T HAE++AI + + Sbjct: 4 ALELAEDAVAEQGEVPVGCVFVNDNNVEIASAANETNEAMCATRHAELVAIDGALKHSAA 63 Query: 69 EILP----EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 P LYVT EPC MCA+A+S I + Y+G N K GG + L+ Sbjct: 64 RGQPLDWTRCALYVTCEPCIMCASALSQLGIAKCYFGCRNDKFGGCGS-----ILSLHEG 118 Query: 125 SPEIYPGISEQRSRQIIQDFFK 146 + +I G+ E + + + F+ Sbjct: 119 NFDIVEGLREAEAVDLFRRFYD 140 >gi|162461226|ref|NP_001105963.1| cytidine deaminase1 [Zea mays] gi|119394643|gb|ABL74483.1| putative cytidine deaminase [Zea mays] gi|119394645|gb|ABL74484.1| putative cytidine deaminase [Zea mays] gi|195654311|gb|ACG46623.1| cytidine/deoxycytidylate deaminase family protein [Zea mays] Length = 186 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F++ A+EEA + + P GAV V N++++ N + D TAHAE+ AIR C+ Sbjct: 34 FLTKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIREACKK 93 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L + L + ++Y + EPC MC A+ L+RI+RL YGA Sbjct: 94 LGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGA 130 >gi|23928436|gb|AAN40022.1| putative cytidine deaminase [Zea mays] Length = 180 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F++ A+EEA + +E P GAV V N++++ N + D AHAE+ AIR C+ Sbjct: 28 FLTKAVEEAYRGVDCGDEGPFGAVVVRNDEVVVSCHNMVLKHTDPIAHAEVTAIREACKK 87 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L + L + ++Y + EPC MC A+ L+RI+RL YGA Sbjct: 88 LGKIELSDCEIYASCEPCPMCFGALHLSRIKRLVYGA 124 >gi|291165661|gb|EFE27710.1| cytidine/deoxycytidylate deaminase family protein [Filifactor alocis ATCC 35896] Length = 150 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 4/106 (3%) Query: 8 MSCALEEAQNAAL----RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M C +EEA AL + E+PVGAV V ++ II R N + HAE++AI+ Sbjct: 1 MDCYMEEAFREALYSYQKEEVPVGAVIVKDDVIIGRGHNVIETHQSSVCHAEMIAIQQAQ 60 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 + L L +YVTLEPC MC AI +R+ L+ + + G Sbjct: 61 KHLRNWRLNGAKMYVTLEPCLMCMGAILNSRLSELHIATRDFERGA 106 >gi|119394651|gb|ABL74487.1| putative cytidine deaminase [Zea mays] gi|119394653|gb|ABL74488.1| putative cytidine deaminase [Zea mays] Length = 186 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F++ A+EEA + + P GAV V N++++ N + D TAHAE+ AIR C+ Sbjct: 34 FLTKAVEEAYRGVDCGDGGPFGAVVVCNDEVVVSCHNMVLKHTDPTAHAEVTAIREACKK 93 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L + L + ++Y + EPC MC A+ L+RI+RL YGA Sbjct: 94 LGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGA 130 >gi|29654671|ref|NP_820363.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii RSA 493] gi|153209491|ref|ZP_01947406.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|154706754|ref|YP_001424808.1| hypothetical protein CBUD_1461 [Coxiella burnetii Dugway 5J108-111] gi|161830445|ref|YP_001597217.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii RSA 331] gi|165923928|ref|ZP_02219760.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii RSA 334] gi|212212253|ref|YP_002303189.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii CbuG_Q212] gi|212218777|ref|YP_002305564.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii CbuK_Q154] gi|29541939|gb|AAO90877.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii RSA 493] gi|120575344|gb|EAX31968.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|154356040|gb|ABS77502.1| hypothetical protein CBUD_1461 [Coxiella burnetii Dugway 5J108-111] gi|161762312|gb|ABX77954.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii RSA 331] gi|165916620|gb|EDR35224.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii RSA 334] gi|212010663|gb|ACJ18044.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii CbuG_Q212] gi|212013039|gb|ACJ20419.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii CbuK_Q154] Length = 159 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 49/93 (52%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA+ V ++KII++ NR D TAH+EI+AIR C+ L+ L LYV EPC Sbjct: 28 PFGALIVRDSKIIAKGVNRVTTSNDPTAHSEIVAIREACQKLNTFNLTGCYLYVNCEPCP 87 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 MC A ARI ++ + + I +Y Sbjct: 88 MCLGACYWARIDKIIFSLTKKDAENIGFKDAYY 120 >gi|162461371|ref|NP_001105964.1| cytidine deaminase2 [Zea mays] gi|119394647|gb|ABL74485.1| putative cytidine deaminase [Zea mays] gi|119394649|gb|ABL74486.1| putative cytidine deaminase [Zea mays] Length = 186 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F++ A+EEA + + P GAV V N++++ N + D TAHAE+ AIR C+ Sbjct: 34 FLTKAVEEAYRGVDCGDGGPFGAVVVCNDEVVVSCHNMVLKHTDPTAHAEVTAIREACKK 93 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L + L + ++Y + EPC MC A+ L+RI+RL YGA Sbjct: 94 LGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGA 130 >gi|325856346|ref|ZP_08172062.1| guanine deaminase [Prevotella denticola CRIS 18C-A] gi|327312522|ref|YP_004327959.1| guanine deaminase [Prevotella denticola F0289] gi|325483530|gb|EGC86502.1| guanine deaminase [Prevotella denticola CRIS 18C-A] gi|326944415|gb|AEA20300.1| guanine deaminase [Prevotella denticola F0289] Length = 155 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 51/110 (46%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+E + ++ P GAV N +II+ N D TAHAE+ IR C+ L Sbjct: 6 LMRRAIELSADSVRNGGGPFGAVIARNGEIIAEGSNGVTIYNDPTAHAEVSTIRKACQKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + L ++Y + EPC MC AI A + ++YY GI F Sbjct: 66 NTFDLTGCEIYTSCEPCPMCLGAIYWAHLDKIYYANDRKDAAGIGFDDDF 115 >gi|33865610|ref|NP_897169.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. WH 8102] gi|33632780|emb|CAE07591.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. WH 8102] Length = 157 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 1/140 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M L A E+PV AV + + I NR +D HAE++A+ I Sbjct: 10 WMEVLLARASVNGDSGEVPVAAVILDEQGRCIGHGRNRRERCQDPLGHAELVALSQAATI 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L VTLEPC MCA A+ AR+ + +GA++ K GG+ + HH Sbjct: 70 RGDWRFNPCTLLVTLEPCPMCAGALVQARMGTVIFGATDRKRGGLGGCINLADDPSAHHH 129 Query: 126 PEIYPGISEQRSRQIIQDFF 145 + + ++R+ + ++ +F Sbjct: 130 MRVVGPLMQERAAEQLEIWF 149 >gi|242043476|ref|XP_002459609.1| hypothetical protein SORBIDRAFT_02g007465 [Sorghum bicolor] gi|241922986|gb|EER96130.1| hypothetical protein SORBIDRAFT_02g007465 [Sorghum bicolor] Length = 175 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 1/99 (1%) Query: 7 FMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A++EA A P GAV V ++ + + N R+ D +AHAE+ AIR C+ Sbjct: 22 FILKAVDEAYRAVECDGGYPFGAVIVHGDEEVVSSHNLVRKDTDPSAHAEVAAIRQACKK 81 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L + L + ++Y + EPC MC I L++I+++ YGA + Sbjct: 82 LGKINLSDCEIYTSCEPCPMCLGLIRLSKIKKVVYGAKS 120 >gi|76160949|gb|ABA40438.1| unknown [Solanum tuberosum] Length = 186 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F++ A+EEA + + P GAV V NN+++ N + D TAHAE+ A+R C+ Sbjct: 34 FLTQAVEEAYKGVECGDGGPFGAVVVCNNEVVVSCHNMVLKHTDPTAHAEVTAVREACKK 93 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L++ L + ++Y + EPC MC AI L+RI+RL YGA Sbjct: 94 LNRIELADCEIYASCEPCPMCFGAIHLSRIKRLVYGA 130 >gi|307565561|ref|ZP_07628041.1| guanine deaminase [Prevotella amnii CRIS 21A-A] gi|307345720|gb|EFN91077.1| guanine deaminase [Prevotella amnii CRIS 21A-A] Length = 155 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 12/145 (8%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 A+E + N+ P GAV N KII+ N+ D TAHAEI IR+ C L Sbjct: 10 AIELSINSVRNGGGPFGAVISHNGKIIAEGSNKVTINNDPTAHAEISTIRIACEKLKTFN 69 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130 L ++Y + EPC MC AI A + ++YY I F + E+ P Sbjct: 70 LSGCEIYTSCEPCPMCLGAIYWAHLDKIYYANDRKDAAKIGFDDDF-----IYQEIEVEP 124 Query: 131 GISEQRSRQIIQ-------DFFKER 148 ++ S ++Q D ++E+ Sbjct: 125 QYRKKPSEILLQSEAIKAFDLWREK 149 >gi|288561455|ref|YP_003424941.1| CMP/dCMP deaminase [Methanobrevibacter ruminantium M1] gi|288544165|gb|ADC48049.1| CMP/dCMP deaminase [Methanobrevibacter ruminantium M1] Length = 155 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 18/142 (12%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA+ ++ +P+GAV V N+IISR NR + HAE+ AI R L Sbjct: 5 FMEEAIKEAEISSKEGGLPIGAVLVKENQIISRGHNRLIQKDSSILHAEMDAIENAGR-L 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTLATC 122 + E + LY TL PC MC+ A+ L I R+ G + G +NG + L Sbjct: 64 NHEDYQKCTLYTTLSPCPMCSGAVILYNIPRVVIGDNQTLMGAEKLLKDNGVEIIVL--- 120 Query: 123 HHSPEIYPGISEQRSRQIIQDF 144 ++ + +++ +DF Sbjct: 121 ----------NDDKCKELFEDF 132 >gi|299134252|ref|ZP_07027445.1| CMP/dCMP deaminase zinc-binding [Afipia sp. 1NLS2] gi|298590999|gb|EFI51201.1| CMP/dCMP deaminase zinc-binding [Afipia sp. 1NLS2] Length = 154 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 52/107 (48%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M F+ A+E A+ + P GAV V + K+I+ N E D T HAE+ AIR Sbjct: 1 MSDAKGFLCEAIELARENVRKGGRPFGAVLVKDGKVIATGVNEILETGDPTTHAELQAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 + +L L +Y + PC MC +A+ L IR Y SN +G Sbjct: 61 VASHVLGSPRLDGCTIYASGHPCPMCLSAMHLTGIREFAYAYSNEEG 107 >gi|21673423|ref|NP_661488.1| cytosine deaminase [Chlorobium tepidum TLS] gi|21646524|gb|AAM71830.1| cytosine deaminase [Chlorobium tepidum TLS] Length = 148 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 4/108 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + + FM+ ALE+A+ + +PVGAV V N K+++ N+ + D AH E+ IR Sbjct: 1 MNRDHEFMALALEQARKSYDEGGVPVGAVMVENGKVLAAGHNQRVQQGDPIAHGEMDCIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKG 107 R + V LY TL PC MCA AI I R+ G N KG Sbjct: 61 KAGRCARYDT---VTLYTTLSPCMMCAGAIVQFGIGRVVVGEDRNFKG 105 >gi|108763474|ref|YP_633568.1| putative guanine deaminase [Myxococcus xanthus DK 1622] gi|108467354|gb|ABF92539.1| putative guanine deaminase [Myxococcus xanthus DK 1622] Length = 153 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/101 (37%), Positives = 54/101 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ A+ P GA+ V + ++I+RA N + KD TAHAE+LAIR + L Sbjct: 8 FMREAIALARTNVKSGGRPFGALLVRDGRVIARAVNEVNQTKDPTAHAELLAIRNASQSL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 L +Y + PC MC AA+ L I+ Y+ SN +G Sbjct: 68 GSASLSGCVVYASGHPCPMCLAAMYLCGIQGAYFAYSNEEG 108 >gi|316971587|gb|EFV55344.1| tRNA-specific adenosine deaminase 2 [Trichinella spiralis] Length = 311 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 10/144 (6%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR---MGCR--- 64 A A+ A E+PVG V + N II R NR K+ HAE+ A + C+ Sbjct: 11 AFTLARKALSIGEVPVGCVLLYENVIIGRGHNRVNFYKNACRHAEMEAFDEAFLWCKANC 70 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 ++ + L+VT EPC MCAA I +++R+ YG N + GG G+ T H Sbjct: 71 FSFNDVFLKTTLFVTCEPCMMCAALICKMQLKRVVYGCPNDRFGGF--GSVLDVKETFGH 128 Query: 125 S--PEIYPGISEQRSRQIIQDFFK 146 + EI + S +++Q F++ Sbjct: 129 TFPSEIVANYRKDESVKLLQIFYE 152 >gi|256851752|ref|ZP_05557140.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii 27-2-CHN] gi|260661531|ref|ZP_05862443.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii 115-3-CHN] gi|282933582|ref|ZP_06338952.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1] gi|297205374|ref|ZP_06922770.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii JV-V16] gi|256615710|gb|EEU20899.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii 27-2-CHN] gi|260547588|gb|EEX23566.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii 115-3-CHN] gi|281302325|gb|EFA94557.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1] gi|297149952|gb|EFH30249.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii JV-V16] Length = 150 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 6/144 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E ++ A P GAV V +N+++ N+ D T HAE IR C Sbjct: 6 FMQEAIELSKKAVEHGNEPFGAVLVKDNEVVFTNENQIFTANDPTFHAETGLIRRFCTST 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-----GGGIENGTQFYTLAT 121 L E LY + EPC MC+ A+ +++ R+ Y ASN G N ++ Sbjct: 66 GITDLSEYTLYTSCEPCFMCSGAMVWSKLGRMVYAASNDDLEMTMGKHGSNCSKI-VFEN 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 +++P + G+ + S +++ +F Sbjct: 125 YNNAPTVTSGVLREESVAVLKAYF 148 >gi|158522912|ref|YP_001530782.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3] gi|158511738|gb|ABW68705.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3] Length = 157 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 3/105 (2%) Query: 1 MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ + FM A+E A+ A ++ + P GAV V + +I+ NR D TAH EI+A Sbjct: 1 MEMHDAFMRRAIELAR-AGMKAGDGGPFGAVVVRDGQIVGEGANRVLAHNDPTAHGEIVA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 IR + L L LY T +PC MC AI A I+ +Y+G S Sbjct: 60 IRDAAKRLGTYDLDGCVLYTTGQPCPMCLGAIYWAHIQTVYFGFS 104 >gi|292491509|ref|YP_003526948.1| guanine deaminase [Nitrosococcus halophilus Nc4] gi|291580104|gb|ADE14561.1| Guanine deaminase [Nitrosococcus halophilus Nc4] Length = 155 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 46/86 (53%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA+ V + +I++ A N E D TAHAEI AIRM C+ ++ L LY + EPC Sbjct: 24 PFGALIVRDGEILAHACNGVVEACDPTAHAEIQAIRMACKHINHFHLEGCVLYCSCEPCP 83 Query: 85 MCAAAISLARIRRLYYGASNPKGGGI 110 MC A A + +YY AS I Sbjct: 84 MCLGAAYWAHLDGIYYAASREDAANI 109 >gi|126659190|ref|ZP_01730328.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Cyanothece sp. CCY0110] gi|126619495|gb|EAZ90226.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Cyanothece sp. CCY0110] Length = 143 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 9/120 (7%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-MGCRI 65 FM AL EA+ + ++P GA+ V N++II R N + DV+AH EI +R M +I Sbjct: 6 FMREALVEAK----KGDLPYGAILVNNDEIIMRGYNTAQRDNDVSAHGEINVLRAMTQKI 61 Query: 66 -LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 S + L LY T EPC MCAAA A + + +GAS + I GTQ L TC + Sbjct: 62 GYSLDSLKNYTLYTTCEPCPMCAAACVWAGVSHIVFGASTEQ--LISLGTQQINL-TCQN 118 >gi|119962522|ref|YP_949093.1| cytidine/deoxycytidylate deaminase [Arthrobacter aurescens TC1] gi|119949381|gb|ABM08292.1| putative cytidine/deoxycytidylate deaminase [Arthrobacter aurescens TC1] Length = 164 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 49/97 (50%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F++ ++E A L + P GAV V + NR D TAHAE+ AIR CR L Sbjct: 10 FLATSIELATANVLNSGGPFGAVIVTADGRAFEGVNRVTATNDPTAHAEVTAIRNACREL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L LY + EPC MC A+ AR+ R+++ A Sbjct: 70 GTFDLSGATLYTSCEPCPMCLASALWARVDRVFFAAD 106 >gi|323454906|gb|EGB10775.1| hypothetical protein AURANDRAFT_21935 [Aureococcus anophagefferens] Length = 152 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 49/144 (34%), Positives = 71/144 (49%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--RELKDVTAHAEILAIRMGCRI 65 M AL+EA+ AA E+PVGAV V + A N +D +AHAE+LA+R Sbjct: 1 MGLALDEARRAAAAGEVPVGAVVVDDATGAVVAAAGNAIEATQDASAHAELLALRRAAAA 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L LY TLEPC +C +A R+ R+ YGA + + G E+ L H+ Sbjct: 61 RGNWRLANCTLYSTLEPCVLCMSACYAFRVGRVVYGAPDHRLGAAESWLNMAELGHPFHA 120 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G+ E + ++ FF+ RR Sbjct: 121 LAVDGGVREPEAADAMRSFFRARR 144 >gi|294930369|ref|XP_002779543.1| cytidine deaminase, putative [Perkinsus marinus ATCC 50983] gi|239888855|gb|EER11338.1| cytidine deaminase, putative [Perkinsus marinus ATCC 50983] Length = 111 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 1/87 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI-RMGCRI 65 FM AL AQ A +E+PVG V N +++ AGN ++ T HAE++A ++ + Sbjct: 22 FMRVALAAAQEAYDTDEVPVGCAFVSNGVVLATAGNETNHTRNATRHAELVATDKIYDKY 81 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISL 92 S + + LYVT+EPC MCAAA+ + Sbjct: 82 KSCDAIRHSTLYVTVEPCVMCAAALHI 108 >gi|159112692|ref|XP_001706574.1| Cytosine deaminase, putative [Giardia lamblia ATCC 50803] gi|157434672|gb|EDO78900.1| Cytosine deaminase, putative [Giardia lamblia ATCC 50803] Length = 169 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 76/143 (53%), Gaps = 14/143 (9%) Query: 12 LEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 +EA A E+PVG A+ +I++ N + ++ T HAEI+A+ ++ S Sbjct: 5 FKEASLALAEREVPVGCAIVDSAGRILATGRNATNKTRNSTHHAEIMAL---AQLPSGTD 61 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130 L + LYVT+EPC MCAAA+S+ + + Y A N K GG + L +H+ + Sbjct: 62 LSDCVLYVTIEPCIMCAAALSIVGLTNIIYFARNSKFGGCGS-----VLDVNNHTARPWT 116 Query: 131 GIS-----EQRSRQIIQDFFKER 148 ++ ++R+ ++Q+FF+ + Sbjct: 117 KLNAKYVPDERAIHLLQEFFERK 139 >gi|120435954|ref|YP_861640.1| cytidine/deoxycytidylate deaminase family protein [Gramella forsetii KT0803] gi|117578104|emb|CAL66573.1| cytidine/deoxycytidylate deaminase family protein [Gramella forsetii KT0803] Length = 149 Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 2/100 (2%) Query: 20 LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 + N P GAV ++II+ + N+ +D T HAE+ AI+ CR L+ L L+ + Sbjct: 24 MDNGGPFGAVITKGDEIIAESCNKVLAKEDCTEHAELRAIQKACRKLNSSSLQGCVLFTS 83 Query: 80 LEPCTMCAAAISLARIRRLYYGAS--NPKGGGIENGTQFY 117 EPC MC A A +YYGAS + K G + +Y Sbjct: 84 CEPCMMCLGAAYWADFDNIYYGASALDAKEYGFKYSDMYY 123 >gi|254282421|ref|ZP_04957389.1| guanine deaminase [gamma proteobacterium NOR51-B] gi|219678624|gb|EED34973.1| guanine deaminase [gamma proteobacterium NOR51-B] Length = 155 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 42/76 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V NN++I+ + NR D TAHAE+ AIR L L LY + EPC Sbjct: 24 PFGAVIVKNNEMIAESANRVLAHSDPTAHAEVEAIRSAGEALGTFDLSGCTLYASCEPCP 83 Query: 85 MCAAAISLARIRRLYY 100 MC AI ARI +Y+ Sbjct: 84 MCLGAIYWARISAVYF 99 >gi|261345369|ref|ZP_05973013.1| guanine deaminase [Providencia rustigianii DSM 4541] gi|282566412|gb|EFB71947.1| guanine deaminase [Providencia rustigianii DSM 4541] Length = 154 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 47/80 (58%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + +++ N+ E D TAHAE+LA+R +L + L + +Y + +PC Sbjct: 24 PFGAVVVYDGSVVATGVNQMLERNDPTAHAELLALRQAGEVLGKVRLDDCVVYASGQPCP 83 Query: 85 MCAAAISLARIRRLYYGASN 104 MC AA+ +A I R+ Y SN Sbjct: 84 MCLAAMRMAGISRIVYAYSN 103 >gi|300114455|ref|YP_003761030.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii C-113] gi|299540392|gb|ADJ28709.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii C-113] Length = 187 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 1/103 (0%) Query: 2 KKGNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M A+E ++ A L + P G+V +I+ NR+ +D +AHAEI AIR Sbjct: 34 ERATQWMRRAIELSRKAMELGDGFPFGSVIAKEGEIVGEGWNRSWVNRDPSAHAEIEAIR 93 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 C+ L L D+Y + +PC MC AAI A R+++G S Sbjct: 94 DACKRLDTLSLEGCDVYASAQPCPMCIAAIYWAGANRIFFGNS 136 >gi|88808480|ref|ZP_01123990.1| putative cytidine/deoxycytidylate deaminase [Synechococcus sp. WH 7805] gi|88787468|gb|EAR18625.1| putative cytidine/deoxycytidylate deaminase [Synechococcus sp. WH 7805] Length = 107 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 50/93 (53%) Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 +A+R G +L + L VTLEPC MCA A+ AR+ ++ + A + K GG+ + Sbjct: 1 MALRQGAWVLGDWRMNHCTLLVTLEPCPMCAGALVQARVGQVIFAAKDRKRGGLGSTINL 60 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + HH + G+ E+ + ++ +F++RR Sbjct: 61 ADHESAHHHMHVIGGVMEEEASALLAGWFRQRR 93 >gi|45358432|ref|NP_987989.1| cytidine/deoxycytidylate deaminase [Methanococcus maripaludis S2] gi|44921190|emb|CAF30425.1| Cytidine/deoxycytidylate deaminase, zinc-binding region related protein [Methanococcus maripaludis S2] Length = 141 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 5/116 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A++EA + IP+GAV V NKII R NR + HAE+ A+ R L+ Sbjct: 1 MDEAVKEANLSLKEGGIPIGAVLVYENKIIGRGHNRRVQNNSAILHAEMDALENAGR-LT 59 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTL 119 ++ +LY TL PC MC+ A+ L +I+++ G + G I+NG L Sbjct: 60 SDVYKNCELYTTLSPCIMCSGAVLLYKIKKVVIGENKTFLGAEDLLIKNGVAVEVL 115 >gi|189466441|ref|ZP_03015226.1| hypothetical protein BACINT_02816 [Bacteroides intestinalis DSM 17393] gi|189434705|gb|EDV03690.1| hypothetical protein BACINT_02816 [Bacteroides intestinalis DSM 17393] Length = 175 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/77 (42%), Positives = 42/77 (54%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV + +II+ NR D TAHAE+ AIR L L ++Y + EPC Sbjct: 44 PFGAVIAKDGEIIATGTNRVTASCDPTAHAEVSAIRAAATKLGTFNLSGCEIYTSCEPCP 103 Query: 85 MCAAAISLARIRRLYYG 101 MC AI AR+ R+YYG Sbjct: 104 MCLGAIYWARLERMYYG 120 >gi|53804410|ref|YP_113955.1| zinc-binding domain-containing protein [Methylococcus capsulatus str. Bath] gi|53758171|gb|AAU92462.1| zinc-binding domain protein [Methylococcus capsulatus str. Bath] Length = 164 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 2/104 (1%) Query: 2 KKGNVFMSCALEEAQNAAL--RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ +M A++ + A + R P GAV V ++++ AGN D TAHAEI AI Sbjct: 9 EQDRAYMRLAIQTMRRAGIVDRTGGPFGAVIVRGGQVLAVAGNSVIRDNDPTAHAEINAI 68 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 R CR + L LY + E C MC A+ ARI ++YY AS Sbjct: 69 REACRRIGSYDLSGAVLYSSCECCPMCYASAYWARIDQIYYAAS 112 >gi|213969586|ref|ZP_03397722.1| cytosine deaminase [Pseudomonas syringae pv. tomato T1] gi|301383360|ref|ZP_07231778.1| cytosine deaminase [Pseudomonas syringae pv. tomato Max13] gi|302058808|ref|ZP_07250349.1| cytosine deaminase [Pseudomonas syringae pv. tomato K40] gi|302134497|ref|ZP_07260487.1| cytosine deaminase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925682|gb|EEB59241.1| cytosine deaminase [Pseudomonas syringae pv. tomato T1] Length = 145 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 1/100 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EAQ IP+G+V V KII R NR + T H E+ A+ R Sbjct: 2 DAFMQAAIDEAQLGLDEGGIPIGSVIVHAGKIIGRGHNRRVQEGSATRHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 + E LY TL PC MC+ AI L IR++ G ++ Sbjct: 62 -QPASVYREAVLYTTLSPCAMCSGAILLYGIRKVIVGENH 100 >gi|291521867|emb|CBK80160.1| Cytosine/adenosine deaminases [Coprococcus catus GD/7] Length = 175 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 64/145 (44%), Gaps = 6/145 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ +Q A P GAV V N +I+ N+ D T H E IR C Sbjct: 27 FMREAIRLSQLAVEHGNEPFGAVLVKNGEIVFTNENQIYTRHDPTFHGEAGLIREFCAKT 86 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-----GGGIENGTQFYTLAT 121 S L + LY + EPC MC+ A+ ++ RL YGASN G N ++ Sbjct: 87 SITDLHDYTLYSSCEPCFMCSGAMVWVKLGRLVYGASNSDLEAILGNEGCNCSKI-VFDN 145 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFK 146 P++ GI S I++D+F Sbjct: 146 SFWQPQVTAGILRAESLMILKDYFD 170 >gi|168185037|ref|ZP_02619701.1| guanine deaminase [Clostridium botulinum Bf] gi|237794579|ref|YP_002862131.1| guanine deaminase [Clostridium botulinum Ba4 str. 657] gi|182671910|gb|EDT83871.1| guanine deaminase [Clostridium botulinum Bf] gi|229262002|gb|ACQ53035.1| guanine deaminase [Clostridium botulinum Ba4 str. 657] Length = 157 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 44/79 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P G+ V + ++I+ A N D TAH E+ IR C+ LS L +LY T EPC Sbjct: 25 PFGSAIVKDGEVIAVAHNTVVGDNDPTAHGEVNVIRKACKKLSTFDLSGCELYTTSEPCP 84 Query: 85 MCAAAISLARIRRLYYGAS 103 MC +AI A I ++YYG + Sbjct: 85 MCMSAIIWANISKVYYGCT 103 >gi|221064913|ref|ZP_03541018.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] gi|220709936|gb|EED65304.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] Length = 166 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 1/96 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++ A+ A A R P GA+ V + +++++A N N E D TAHAE+ AIR+ + Sbjct: 16 YLREAIALADTARERGNRPFGALIVAADGRVLAQASNANGESGDCTAHAELSAIRLASPL 75 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 S+ L LY + EPC MCA AI + I R+ YG Sbjct: 76 HSRNELAVATLYSSAEPCVMCAGAIFWSAIGRVVYG 111 >gi|307354384|ref|YP_003895435.1| CMP/dCMP deaminase zinc-binding protein [Methanoplanus petrolearius DSM 11571] gi|307157617|gb|ADN36997.1| CMP/dCMP deaminase zinc-binding protein [Methanoplanus petrolearius DSM 11571] Length = 148 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/105 (39%), Positives = 53/105 (50%), Gaps = 3/105 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A+ EA+ IP+GAV V + KII NR + D HAEI +R RI Sbjct: 8 FMTAAIIEAKTGHDEGGIPIGAVLVRDGKIIGSGHNRRIQENDPIIHAEIDCLRNAGRIG 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 S + + LY TL PC +CA A+ IRR+ G S G E Sbjct: 68 SYK---DTTLYSTLMPCYLCAGAVVQFGIRRVVVGESRNFAGAKE 109 >gi|28868808|ref|NP_791427.1| cytosine deaminase [Pseudomonas syringae pv. tomato str. DC3000] gi|28852047|gb|AAO55122.1| cytosine deaminase [Pseudomonas syringae pv. tomato str. DC3000] Length = 145 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 1/100 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EAQ IP+G+V V KII R NR + T H E+ A+ R Sbjct: 2 DAFMQAAIDEAQLGLDEGGIPIGSVIVHAGKIIGRGHNRRVQEGSATRHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 + E LY TL PC MC+ AI L IR++ G ++ Sbjct: 62 -QPASVYREAVLYTTLSPCAMCSGAILLYGIRKVIVGENH 100 >gi|170757063|ref|YP_001780911.1| guanine deaminase [Clostridium botulinum B1 str. Okra] gi|169122275|gb|ACA46111.1| guanine deaminase [Clostridium botulinum B1 str. Okra] Length = 157 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 44/79 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P G+ V N ++I+ A N D TAH E+ IR C+ L+ L +LY T EPC Sbjct: 25 PFGSAIVKNGEVIAVAHNTVVGDNDPTAHGEVNVIRKACKKLNTFDLSGCELYTTSEPCP 84 Query: 85 MCAAAISLARIRRLYYGAS 103 MC +AI A I ++YYG + Sbjct: 85 MCMSAIIWANISKVYYGCT 103 >gi|94265695|ref|ZP_01289434.1| Guanine deaminase [delta proteobacterium MLMS-1] gi|93453781|gb|EAT04153.1| Guanine deaminase [delta proteobacterium MLMS-1] Length = 156 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/91 (39%), Positives = 45/91 (49%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P A+ VL+++II + NR D TAHAEI AIR CR L LYV EPC Sbjct: 25 PFAALVVLDDEIIGQGCNRVTSDNDPTAHAEIEAIRDACRRRGDFRLTGHTLYVNCEPCP 84 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 MC AA A ++ + Y A I+ Q Sbjct: 85 MCLAAAYWADLKEICYAAERRDAAAIDFADQ 115 >gi|71733993|ref|YP_273732.1| cytosine deaminase [Pseudomonas syringae pv. phaseolicola 1448A] gi|257486822|ref|ZP_05640863.1| cytosine deaminase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289625968|ref|ZP_06458922.1| cytosine deaminase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647969|ref|ZP_06479312.1| cytosine deaminase [Pseudomonas syringae pv. aesculi str. 2250] gi|298488192|ref|ZP_07006229.1| Cytosine deaminase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71554546|gb|AAZ33757.1| cytosine deaminase [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157471|gb|EFH98554.1| Cytosine deaminase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320325406|gb|EFW81471.1| cytosine deaminase [Pseudomonas syringae pv. glycinea str. B076] gi|320327453|gb|EFW83466.1| cytosine deaminase [Pseudomonas syringae pv. glycinea str. race 4] gi|330869365|gb|EGH04074.1| cytosine deaminase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330877290|gb|EGH11439.1| cytosine deaminase [Pseudomonas syringae pv. glycinea str. race 4] gi|330988661|gb|EGH86764.1| cytosine deaminase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010292|gb|EGH90348.1| cytosine deaminase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 145 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 1/97 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EAQ IP+G+V V KII R NR + T H E+ A+ R Sbjct: 2 DAFMQAAIDEAQLGLKEGGIPIGSVIVHEGKIIGRGHNRRVQEGSATRHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 ++ + + LY TL PC MC+ AI L IR++ G Sbjct: 62 QPAR-VYRDAVLYTTLSPCAMCSGAILLYGIRKVIVG 97 >gi|331017345|gb|EGH97401.1| cytosine deaminase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 145 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 1/97 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EAQ IP+G+V V KII R NR + T H E+ A+ R Sbjct: 2 DAFMQAAIDEAQLGLDEGGIPIGSVIVHAGKIIGRGHNRRVQEGSATRHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + E LY TL PC MC+ AI L IR++ G Sbjct: 62 -QPASVYREAVLYTTLSPCAMCSGAILLYGIRKVIVG 97 >gi|94263276|ref|ZP_01287092.1| Guanine deaminase [delta proteobacterium MLMS-1] gi|94266409|ref|ZP_01290105.1| Guanine deaminase [delta proteobacterium MLMS-1] gi|93452981|gb|EAT03477.1| Guanine deaminase [delta proteobacterium MLMS-1] gi|93456359|gb|EAT06483.1| Guanine deaminase [delta proteobacterium MLMS-1] Length = 156 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/91 (39%), Positives = 45/91 (49%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P A+ VL+++II + NR D TAHAEI AIR CR L LYV EPC Sbjct: 25 PFAALVVLDDEIIGQGCNRVTSDNDPTAHAEIEAIRDACRRRGDFRLTGHTLYVNCEPCP 84 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 MC AA A ++ + Y A I+ Q Sbjct: 85 MCLAAAYWADLKEICYAAERRDAAAIDFADQ 115 >gi|330967403|gb|EGH67663.1| cytosine deaminase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 145 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 1/97 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EAQ IP+G+V V KII R NR + T H E+ A+ R Sbjct: 2 DAFMQAAIDEAQLGLDEGGIPIGSVIVHAGKIIGRGHNRRVQEGSATRHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + E LY TL PC MC+ AI L IR++ G Sbjct: 62 -QPASVYREAVLYTTLSPCAMCSGAILLYGIRKVIVG 97 >gi|322436459|ref|YP_004218671.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp. MP5ACTX9] gi|321164186|gb|ADW69891.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp. MP5ACTX9] Length = 160 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/98 (40%), Positives = 51/98 (52%), Gaps = 1/98 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A++ A QN P GAV V ++I+ N D TAHAE+ AIR C Sbjct: 10 FMQQAIDLATQNVLSGRGGPFGAVIVRAGEVIATGINLVTATNDPTAHAEVTAIRNACAH 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 LS L LY + EPC MC AI +RI LY+G++ Sbjct: 70 LSTFELRGATLYSSCEPCPMCLTAILWSRIDTLYFGST 107 >gi|119486171|ref|ZP_01620231.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lyngbya sp. PCC 8106] gi|119456662|gb|EAW37791.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lyngbya sp. PCC 8106] Length = 144 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 7/103 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR---MGC 63 +M ALEEA+ + ++P GAV V ++I+ + N + DVTAHAEI +R + Sbjct: 6 YMKIALEEAK----KGDMPYGAVLVKEDQIVVQGHNTAQRDNDVTAHAEINVLRQFTLEN 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 + S + L LY T EPC MCAAA + + +GAS + Sbjct: 62 KSYSIDALKGYTLYTTCEPCPMCAAACVWVGLSEIVFGASTQQ 104 >gi|256374328|ref|YP_003097988.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827] gi|255918631|gb|ACU34142.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827] Length = 160 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 2/128 (1%) Query: 23 EIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80 +IP+GA V + ++RA N L D TAHAE+LA+R + L L VT+ Sbjct: 23 DIPIGAAVFGPDGAELARACNARERLGDPTAHAEVLALRAAAAVFGDGWRLGGCTLAVTV 82 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A+ LAR+ R+ +GA PK G + +H E+ G+ E + Sbjct: 83 EPCAMCAGALVLARVDRVVFGAWEPKTGAAGSLWDVVRDRRLNHRAEVVGGVREAECAAL 142 Query: 141 IQDFFKER 148 ++DFF R Sbjct: 143 MRDFFAGR 150 >gi|108801923|ref|YP_642120.1| tRNA-adenosine deaminase [Mycobacterium sp. MCS] gi|119871075|ref|YP_941027.1| tRNA-adenosine deaminase [Mycobacterium sp. KMS] gi|126437904|ref|YP_001073595.1| tRNA-adenosine deaminase [Mycobacterium sp. JLS] gi|108772342|gb|ABG11064.1| tRNA-adenosine deaminase [Mycobacterium sp. MCS] gi|119697164|gb|ABL94237.1| tRNA-adenosine deaminase [Mycobacterium sp. KMS] gi|126237704|gb|ABO01105.1| tRNA-adenosine deaminase [Mycobacterium sp. JLS] Length = 150 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80 ++P+GAV + ++RA N L D TAHAE+LA+R +L L L VT+ Sbjct: 22 DVPIGAVVFGPDGTELARAANAREALGDPTAHAEVLALRAAAAVLGDGWRLEGTTLAVTV 81 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ LAR+ R+ +GA PK G + + +H P + G+ + Sbjct: 82 EPCTMCAGALVLARVARVVFGAWEPKTGAVGSLWDVVRDRRLNHRPGVRGGVLADECAKP 141 Query: 141 IQDFFKERR 149 ++ FF +R Sbjct: 142 LEAFFARQR 150 >gi|183601156|ref|ZP_02962649.1| hypothetical protein PROSTU_04786 [Providencia stuartii ATCC 25827] gi|188019501|gb|EDU57541.1| hypothetical protein PROSTU_04786 [Providencia stuartii ATCC 25827] Length = 154 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 47/80 (58%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + +++ N+ EL D TAHAE++A+R L + L + +Y + +PC Sbjct: 24 PFGAVIVRDGAVVATGVNQMLELNDPTAHAELMALRQAGETLKRTRLEDCVVYASGQPCP 83 Query: 85 MCAAAISLARIRRLYYGASN 104 MC AA+ +A I R+ Y SN Sbjct: 84 MCLAAMRMAGISRIVYAYSN 103 >gi|77164674|ref|YP_343199.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Nitrosococcus oceani ATCC 19707] gi|254434877|ref|ZP_05048385.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Nitrosococcus oceani AFC27] gi|76882988|gb|ABA57669.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nitrosococcus oceani ATCC 19707] gi|207091210|gb|EDZ68481.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Nitrosococcus oceani AFC27] Length = 190 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 1/104 (0%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M A+E ++ A L + P G+V +I+ NR+ +D +AHAEI AIR Sbjct: 34 ERATQWMRRAIELSRKAMELGDGFPFGSVIAKEGEIVGEGWNRSWVNRDPSAHAEIEAIR 93 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 C+ L L D+Y + +PC MC AAI A R+++G ++ Sbjct: 94 DACKRLDTLSLEGCDVYASAQPCPMCIAAIYWAGADRIFFGNND 137 >gi|330971095|gb|EGH71161.1| cytosine deaminase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 145 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 1/97 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A +EAQ IP+G+V V KII R NR + T H E+ A+ R Sbjct: 2 DAFMQAAFDEAQLGLKEGGIPIGSVIVHGGKIIGRGHNRRVQEGSATKHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + LY TL PC MC+ AI L IR++ G Sbjct: 62 -QPASVYRDSVLYTTLSPCAMCSGAILLYGIRKVIIG 97 >gi|261407450|ref|YP_003243691.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus sp. Y412MC10] gi|261283913|gb|ACX65884.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus sp. Y412MC10] Length = 159 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 44/92 (47%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA+ V + ++I R N L D TAHAE+ AIR C L L +Y + EPC Sbjct: 28 PFGAIVVKDGQVIGRGRNLVTALNDPTAHAEVQAIREACLHLEDFQLKGCTIYTSCEPCP 87 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC AI +R +YY ++ I F Sbjct: 88 MCLGAIYWSRPDAVYYASTKQDAAEIGFDDHF 119 >gi|288929191|ref|ZP_06423036.1| guanine deaminase [Prevotella sp. oral taxon 317 str. F0108] gi|288329293|gb|EFC67879.1| guanine deaminase [Prevotella sp. oral taxon 317 str. F0108] Length = 155 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 44/92 (47%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV +II+ A NR D TAHAE+ AIR+ L L D+Y + EPC Sbjct: 24 PFGAVIARKGEIIAEAANRVTLDHDPTAHAEVSAIRLASSKLGTFNLSGCDIYTSCEPCP 83 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC AI AR+ +YY + I F Sbjct: 84 MCLGAIYWARLDNVYYANNREDAANIGFDDDF 115 >gi|224540782|ref|ZP_03681321.1| hypothetical protein BACCELL_05696 [Bacteroides cellulosilyticus DSM 14838] gi|224517611|gb|EEF86716.1| hypothetical protein BACCELL_05696 [Bacteroides cellulosilyticus DSM 14838] Length = 155 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/77 (41%), Positives = 42/77 (54%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV + +II+ NR D TAHAE+ AIR L L ++Y + EPC Sbjct: 24 PFGAVIAKDGEIIATGTNRVTSSCDPTAHAEVSAIRAAATSLGTFNLSGCEIYTSCEPCP 83 Query: 85 MCAAAISLARIRRLYYG 101 MC AI AR+ ++YYG Sbjct: 84 MCLGAIYWARLDKMYYG 100 >gi|320451012|ref|YP_004203108.1| tRNA(Ile)-lysidine synthase [Thermus scotoductus SA-01] gi|320151181|gb|ADW22559.1| tRNA(Ile)-lysidine synthase [Thermus scotoductus SA-01] Length = 514 Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 7/104 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ ALEEA+ A E+PVGAV V+ ++ RA N+ +D TAHAE+L +R R Sbjct: 382 YMALALEEARQAFQEGEVPVGAVLVVGERVY-RAHNQVEATRDPTAHAEMLLLREVGRGA 440 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 LYVTLEPC MC A+ A + + YG N K G + Sbjct: 441 RGG-----RLYVTLEPCRMCHHALREAGV-EVVYGVENLKEGAL 478 >gi|66047004|ref|YP_236845.1| cytosine deaminase [Pseudomonas syringae pv. syringae B728a] gi|289676943|ref|ZP_06497833.1| cytosine deaminase [Pseudomonas syringae pv. syringae FF5] gi|302187712|ref|ZP_07264385.1| cytosine deaminase [Pseudomonas syringae pv. syringae 642] gi|63257711|gb|AAY38807.1| Cytosine deaminase [Pseudomonas syringae pv. syringae B728a] gi|330977861|gb|EGH77764.1| cytosine deaminase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 145 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 1/97 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A +EAQ IP+G+V V KII R NR + T H E+ A+ R Sbjct: 2 DAFMQAAFDEAQLGLKEGGIPIGSVIVHGGKIIGRGHNRRVQEGSATKHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + LY TL PC MC+ AI L IR++ G Sbjct: 62 -QPASVYRDSVLYTTLSPCAMCSGAILLYGIRKVIIG 97 >gi|157135264|ref|XP_001656575.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2, putative [Aedes aegypti] gi|108870242|gb|EAT34467.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2, putative [Aedes aegypti] Length = 171 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 9/146 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+A+ A E+PVG V V +II+ N E K+ T H E + I Sbjct: 14 FMEQALEQARKAEQLKEVPVGCVFVYRGEIIANGCNLVNETKNATRHVEFICIDQVLEYC 73 Query: 67 SQEILPEVDLY------VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L D++ VT+EPC MCAAA+ +R + YG N + GG T Sbjct: 74 KNRSLKHEDVFREVTVVVTVEPCIMCAAALIELNVREVIYGCKNDRFGGC---TVLDVPG 130 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 S I G+ + +++++F+K Sbjct: 131 LLKTSIPIRGGVRADEAMELLKEFYK 156 >gi|288905614|ref|YP_003430836.1| guanine deaminase [Streptococcus gallolyticus UCN34] gi|288732340|emb|CBI13910.1| putative guanine deaminase [Streptococcus gallolyticus UCN34] Length = 154 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A++EA + + + P G+V V N +I++ N D TAH E+ AIR Sbjct: 5 YMQKAIQEAYDGIKKGDGGPFGSVIVKNGEIVASGHNMVLAHHDPTAHGEVTAIRKAGEK 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L L L+ T EPC MC AA A I ++YYG + Sbjct: 65 LGTHDLSGTTLFTTGEPCPMCLAACLWANIDKVYYGCT 102 >gi|189425440|ref|YP_001952617.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ] gi|189421699|gb|ACD96097.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ] Length = 145 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 1/97 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A+EEA+ IP+G+V V NN+II R NR + H E+ A+ R Sbjct: 2 DSFMQAAIEEAEAGLAEGGIPIGSVIVHNNRIIGRGHNRRVQQGSAILHGEMDALERAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + E LY TL PC MC+ AI L I R+ G Sbjct: 62 -QPASVYREAVLYTTLSPCPMCSGAILLYGIPRVVIG 97 >gi|24217029|ref|NP_714510.1| cytidine deaminase [Leptospira interrogans serovar Lai str. 56601] gi|24198438|gb|AAN51528.1| cytidine deaminase [Leptospira interrogans serovar Lai str. 56601] Length = 201 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 4/151 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++ N +S L + +N R+ EIP K+IS N + D + H+EIL Sbjct: 49 IRTDNKILSDFLNKLENLVTRDREEIPSFTRIYHKEKLISETFNEVEKKSDSSFHSEILC 108 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 IR L L + L +LEPC MCA I L+RI ++ Y +G GI + Sbjct: 109 IRNAKEKLKTRYLADCMLITSLEPCLMCAGTILLSRIPKVVYLLPAKQGEGI-SSLSIEM 167 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + + PE++ I + S+ + FFK RR Sbjct: 168 IYSRNFFPELF-CIPTEISKNAFKSFFKVRR 197 >gi|114609581|ref|XP_001172262.1| PREDICTED: hypothetical protein LOC463037 isoform 1 [Pan troglodytes] gi|31874632|emb|CAD98054.1| hypothetical protein [Homo sapiens] gi|119568253|gb|EAW47868.1| deaminase domain containing 1, isoform CRA_b [Homo sapiens] gi|193785142|dbj|BAG54295.1| unnamed protein product [Homo sapiens] Length = 144 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 8/125 (6%) Query: 31 VLNNKIISRAGNRNRELKDVTAHAEILAIRM---GCRILSQ---EILPEVDLYVTLEPCT 84 V NN+++ + N + K+ T HAE++AI CR + E+ LYVT+EPC Sbjct: 2 VYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEVFEHTVLYVTVEPCI 61 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFYT--LATCHHSPEIYPGISEQRSRQIIQ 142 MCAAA+ L +I + YG N + GG + + L + PG + + ++++ Sbjct: 62 MCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRPFQCIPGYRAEEAVEMLK 121 Query: 143 DFFKE 147 F+K+ Sbjct: 122 TFYKQ 126 >gi|193212272|ref|YP_001998225.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327] gi|193085749|gb|ACF11025.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327] Length = 148 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/108 (38%), Positives = 55/108 (50%), Gaps = 4/108 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM+ ALE+A+ + +PVGAV V N K+I+ N+ + D AH E+ IR Sbjct: 1 MDRDREFMALALEQARKSYEEGGVPVGAVMVENGKLIAAGHNQRVQNADPIAHGEMDCIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKG 107 R + V LY TL PC MCA AI I R+ G N KG Sbjct: 61 KAGRRARYDT---VTLYTTLSPCMMCAGAIVQFGIGRVVVGEDRNFKG 105 >gi|256392662|ref|YP_003114226.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM 44928] gi|256358888|gb|ACU72385.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM 44928] Length = 223 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 51/102 (50%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + ++ A+ AQ+ P GAV V + +I+ N D TAHAE+LAIR Sbjct: 71 QASDDWLGQAIALAQDNVEAGGWPFGAVIVRDGAVIATGVNEVLADGDPTAHAEMLAIRE 130 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 CR+L L LY + EPC MC AAI A + + Y A Sbjct: 131 ACRVLKDINLAGAVLYASCEPCPMCLAAIKWAGLTGIVYAAD 172 >gi|104782249|ref|YP_608747.1| deaminase [Pseudomonas entomophila L48] gi|95111236|emb|CAK15956.1| putative deaminase [Pseudomonas entomophila L48] Length = 152 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 52/103 (50%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL+ A+ P GAV V ++I+RA N +D T HAE+ AIR Sbjct: 4 ETYMREALDLARANIQAGGRPFGAVLVYQGRVIARAVNEIHSTQDPTRHAEMQAIRQASE 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 +L + L ++Y + PC MC AA+ L I R ++ N +G Sbjct: 64 VLGRARLDGAEIYASGHPCPMCLAAMHLCGIERAWFAYDNEEG 106 >gi|302803749|ref|XP_002983627.1| hypothetical protein SELMODRAFT_228959 [Selaginella moellendorffii] gi|300148464|gb|EFJ15123.1| hypothetical protein SELMODRAFT_228959 [Selaginella moellendorffii] Length = 216 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+S A++EA + + P GAV V NN+++ N D TAHAE+ A+R C+ Sbjct: 64 FLSKAVDEAYKGVTCGDGGPFGAVVVRNNEVVVSCHNMVLRHTDPTAHAEVTAVREACKK 123 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L++ L + +++ + EPC MC AI L+RI+RL YGA Sbjct: 124 LNRLELSDCEIFASCEPCPMCFGAIHLSRIKRLVYGA 160 >gi|206561430|ref|YP_002232195.1| putative guanine/cytidine deaminase [Burkholderia cenocepacia J2315] gi|198037472|emb|CAR53408.1| putative guanine/cytidine deaminase [Burkholderia cenocepacia J2315] Length = 159 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 49/92 (53%) Query: 16 QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75 +N R P GAV V + K+++R+ N D +AHAE+ A+R + L L Sbjct: 21 ENVRERKTWPFGAVLVRDGKVLARSVNEVEATCDPSAHAEMQAVRAASKALGSTDLSGAV 80 Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 +Y + PC+MC +A+ LA + +YY SN G Sbjct: 81 MYASGYPCSMCLSAMYLAGVSEVYYAYSNEDG 112 >gi|158334126|ref|YP_001515298.1| cytosine/adenosine deaminase [Acaryochloris marina MBIC11017] gi|158304367|gb|ABW25984.1| Cytosine/adenosine deaminase [Acaryochloris marina MBIC11017] Length = 150 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 1/100 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 ++FM A++EAQ IP+G+V V N I+ R N + HAE+ A+ R Sbjct: 4 DLFMDAAIQEAQRGLAAGGIPIGSVVVKNGTIVGRGHNLRVQQGSAILHAEMSALETLGR 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 + +V LY TL PC+MC AI L +I R+ G ++ Sbjct: 64 QPAM-FYQDVTLYTTLSPCSMCTGAILLYKIPRVVIGENH 102 >gi|296130628|ref|YP_003637878.1| Guanine deaminase [Cellulomonas flavigena DSM 20109] gi|296022443|gb|ADG75679.1| Guanine deaminase [Cellulomonas flavigena DSM 20109] Length = 186 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 3/97 (3%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + ++ NR D TAHAE+ AIR CR L + LY + EPC Sbjct: 54 PFGAVVVADGVEVAVGQNRVTRDLDPTAHAEVQAIRAACRAADTFALDGMTLYTSCEPCP 113 Query: 85 MCAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTL 119 +C AA AR+ R+ + A + GG ++ T FY L Sbjct: 114 LCLAACLWARLDRVVFSADRHDASRGGFDD-TAFYEL 149 >gi|42560609|ref|NP_975060.1| cytosine deaminase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492105|emb|CAE76702.1| CYTOSINE DEAMINASE [Mycoplasma mycoides subsp. mycoides SC str. PG1] Length = 155 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 2/114 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 M N + + +++ A N+IPV + NN I+S + N + KD++ HAEI AI Sbjct: 9 MDDFNNILDLMIYQSKKAIKHNDIPVCCCIIDDNNNILSMSINTRYKNKDISQHAEINAI 68 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 L+ L E L TLEPC MC +AI +I +YY + K GI+N Sbjct: 69 NKLINKLNTFNLSEYKLITTLEPCMMCYSAIKQVKIDTIYYLVDSYK-FGIQNN 121 >gi|332293298|ref|YP_004431907.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus 4H-3-7-5] gi|332171384|gb|AEE20639.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus 4H-3-7-5] Length = 147 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 2/96 (2%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 GAV V + ++I+ N +D T HAE+ I++ C+ L + L + DLY + PC Sbjct: 26 AFGAVIVRSGQVIAACHNLVGGSQDPTQHAELRCIQLACKALGTKDLSDCDLYTSCVPCM 85 Query: 85 MCAAAISLARIRRLYYGASN--PKGGGIENGTQFYT 118 MC A AR +YYGAS K G FY Sbjct: 86 MCLGAARWARFENIYYGASAAMAKDAGFIYSDMFYA 121 >gi|329928171|ref|ZP_08282117.1| guanine deaminase [Paenibacillus sp. HGF5] gi|328938048|gb|EGG34447.1| guanine deaminase [Paenibacillus sp. HGF5] Length = 188 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 1/111 (0%) Query: 7 FMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+ EA N P GA+ V + ++I R N L D TAHAE+ AIR C Sbjct: 38 WMHQAIAEAHRNVQHVEGGPFGAIVVKDGQVIGRGRNLVTALNDPTAHAEVQAIREACLH 97 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L L +Y + EPC MC AI +R +YY ++ I F Sbjct: 98 LEDFQLKGCTIYTSCEPCPMCLGAIYWSRPDAVYYASTKQDAAEIGFDDHF 148 >gi|256080812|ref|XP_002576670.1| cytidine/deoxycytidylate deaminase-related [Schistosoma mansoni] gi|238661949|emb|CAZ32907.1| cytidine/deoxycytidylate deaminase-related [Schistosoma mansoni] Length = 89 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 6/89 (6%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR---MGCR 64 M A E A A NE+PVG V N ++I+ N +D T HAE++ IR CR Sbjct: 1 MDIAFELACEALRCNEVPVGCAFVYNGEVIASGRNEVNATRDATQHAEMVTIRRLEQWCR 60 Query: 65 ILSQE---ILPEVDLYVTLEPCTMCAAAI 90 +E IL E DL+VT+EPC MC AA+ Sbjct: 61 NNQKELDKILVECDLFVTVEPCIMCTAAV 89 >gi|110003913|emb|CAK98253.1| putative cytidine and deoxycytidylate deaminase protein [Spiroplasma citri] Length = 159 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 2/117 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 MK + + + +Q A + +P+ A+ V N KII+ N+ + VT HAEI A+ Sbjct: 13 MKDTTLIFNKLYKLSQRAYKKKHVPISALVVDRNGKIIAIGYNKTTK-NSVTTHAEIFAL 71 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 CR + + ++VT+EPC MC AI + I+ + Y SN K G +++ F Sbjct: 72 NQACRKKRTNKISDCSIWVTVEPCMMCLGAIINSGIKVINYYLSNEKYGFLKSNHTF 128 >gi|156387793|ref|XP_001634387.1| predicted protein [Nematostella vectensis] gi|156221469|gb|EDO42324.1| predicted protein [Nematostella vectensis] Length = 96 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/70 (47%), Positives = 38/70 (54%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV +NKII+ N + D TAHAE+ AIR C L L DLY + PC Sbjct: 27 PFGAVITKDNKIIAETANLSFVNCDPTAHAEVSAIRQACSALKSRDLTGCDLYTSCYPCA 86 Query: 85 MCAAAISLAR 94 MC AAI AR Sbjct: 87 MCMAAIYWAR 96 >gi|330955311|gb|EGH55571.1| cytosine deaminase [Pseudomonas syringae Cit 7] Length = 145 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 48/97 (49%), Gaps = 1/97 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A +EAQ IP+G+V V KII R NR + T H E+ A+ R Sbjct: 2 DAFMQAAFDEAQLGLKEGGIPIGSVIVHGGKIIGRGHNRRVQEGSATKHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + V LY TL PC MC+ AI L IR++ G Sbjct: 62 QPASVYRNSV-LYTTLSPCAMCSGAILLYGIRKVIIG 97 >gi|119511953|ref|ZP_01631050.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nodularia spumigena CCY9414] gi|119463373|gb|EAW44313.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nodularia spumigena CCY9414] Length = 143 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 4/97 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ + + P GAV V + ++++ A N + D +AHAEI IR L Sbjct: 6 FMQIALEEAK----KGDAPYGAVIVKHQEVVAVAHNTVKGNSDPSAHAEINVIRSLTAKL 61 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L +Y T EPC MCA A A I + YGAS Sbjct: 62 KSPSLEGYSIYTTGEPCPMCATACVWAGISEIVYGAS 98 >gi|224367573|ref|YP_002601736.1| putative cytidine/deoxycytidylate deaminase [Desulfobacterium autotrophicum HRM2] gi|223690289|gb|ACN13572.1| putative cytidine/deoxycytidylate deaminase [Desulfobacterium autotrophicum HRM2] Length = 181 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 28/158 (17%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIIS---RAGN-----RNRELKDVTAHAEILA 58 +M AL AQ A + E PVGAV V + ++++ R G R E+ HAE+ A Sbjct: 13 YMELALASAQKAFDQGEFPVGAVIVCDGRVVAQGHRVGTGALTGRPSEID----HAEMRA 68 Query: 59 IRMGCRILSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-- 110 ++ E LP ++ T+EPC MC +AI L+ I+++ Y +P GGG Sbjct: 69 LK------ELEGLPLGFDPAGAVIFSTMEPCLMCFSAIILSGIKKIVYAYEDPMGGGTCC 122 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + G TC +++PG+ ++S + FF++ Sbjct: 123 DLGQLPPLYKTC--GIKVFPGVLRKKSLDLFVKFFQKE 158 >gi|160938326|ref|ZP_02085681.1| hypothetical protein CLOBOL_03223 [Clostridium bolteae ATCC BAA-613] gi|158438699|gb|EDP16456.1| hypothetical protein CLOBOL_03223 [Clostridium bolteae ATCC BAA-613] Length = 155 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/151 (30%), Positives = 67/151 (44%), Gaps = 4/151 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +FM A+ +Q A P GAV V + +II N+ D T HAE +R Sbjct: 1 MMNDEIFMKEAIRLSQLAVSHGNEPFGAVLVKDGEIIFSNENQIYTGSDPTFHAEAGLLR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI--ENGTQFYT 118 C L E LY + EPC MC A+ ++ RL YGAS+ I E G + Sbjct: 61 RFCAETHITDLREYTLYSSCEPCFMCCGAMVWTKLGRLVYGASDIDLCSILHEKGAECCK 120 Query: 119 LATCH--HSPEIYPGISEQRSRQIIQDFFKE 147 + H P++ G+ S +I+ +F + Sbjct: 121 IVFEHSPWKPQVTSGVLRDESLKILTAYFSK 151 >gi|126655546|ref|ZP_01726985.1| cytosine deaminase [Cyanothece sp. CCY0110] gi|126623025|gb|EAZ93730.1| cytosine deaminase [Cyanothece sp. CCY0110] Length = 145 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A+ EA+ IP+G+V V +NKII R N+ + D HAEI +R RI Sbjct: 6 FIKAAIAEAKQGLKTGGIPIGSVLVKDNKIIGRGHNKRVQEGDPITHAEIDCLRNAGRIG 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 S + + LY TL PC +CA A+ I+++ G S Sbjct: 66 SYQ---DTVLYSTLMPCYLCAGAVVQFNIKKVIAGES 99 >gi|313203297|ref|YP_004041954.1| cmp/dcmp deaminase zinc-binding protein [Paludibacter propionicigenes WB4] gi|312442613|gb|ADQ78969.1| CMP/dCMP deaminase zinc-binding protein [Paludibacter propionicigenes WB4] Length = 156 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 5/119 (4%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P AV V KII+ NR D TAHAE+ AIR + L L ++Y + EPC Sbjct: 25 PFAAVIVKEGKIIATGANRVTANTDPTAHAEVNAIRKAAKKLGTFDLSGCEIYTSCEPCP 84 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MC A+ A + ++YYG + I F + E+ P +S Q++ D Sbjct: 85 MCLGAVYWAHLDKMYYGNTKADAKNIGFDDSF-----IYDEIELKPENRRLQSVQLLPD 138 >gi|17230776|ref|NP_487324.1| cytosine deaminase [Nostoc sp. PCC 7120] gi|17132379|dbj|BAB74983.1| cytosine deaminase [Nostoc sp. PCC 7120] Length = 143 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 3/97 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA+ IP+G+V V + KI+ R N+ + +D HAEI +R RI Sbjct: 4 FMQAAIQEAKQGRQEGGIPIGSVLVKDGKILGRGHNKRVQDRDPVTHAEIDCLRNAGRIG 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 S LY TL PC +CA A+ I+++ G S Sbjct: 64 SYR---GTTLYSTLMPCYLCAGAVVQFGIKKVIVGES 97 >gi|302833465|ref|XP_002948296.1| hypothetical protein VOLCADRAFT_73641 [Volvox carteri f. nagariensis] gi|300266516|gb|EFJ50703.1| hypothetical protein VOLCADRAFT_73641 [Volvox carteri f. nagariensis] Length = 172 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 4/106 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GCR 64 M AL +A +A E+PVG V V + ++ R N + ++ T HAE++AI C Sbjct: 1 MCQALAQAHDAWACREVPVGCVVVRDGDVVGRGHNLTNKTRNGTRHAEMIAIDQILAACG 60 Query: 65 ILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 Q+ E DLYVT+EPC MCA A+SL R++++G N + GG Sbjct: 61 GAVQDAAFERCDLYVTVEPCIMCAGALSLLGFRKVFFGCGNDRFGG 106 >gi|87120113|ref|ZP_01076009.1| cytosine deaminase [Marinomonas sp. MED121] gi|86164815|gb|EAQ66084.1| cytosine deaminase [Marinomonas sp. MED121] Length = 173 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 12/154 (7%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ N ++ L +Q A P GA+ V++N++ A N D T HAE+ + Sbjct: 16 EQDNHWLKQTLNLSQAAVDAGNHPFGALLVIDNRLALEAENTVNTYNDATRHAEMNLVSQ 75 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C+ LS+ E LY + EPC MCA AI + I+++ Y S + I + Sbjct: 76 ACQNLSESQRKEAVLYTSTEPCAMCAGAIYWSGIKQVVYACSGSELNEIAGKSLI----- 130 Query: 122 CHHSPEIY------PGISEQRSRQIIQDFFKERR 149 C HS E++ P + +S+ +I+ ++ + Sbjct: 131 C-HSEEVFLGAVNPPSVRSTQSQSLIEQACEQHK 163 >gi|56751392|ref|YP_172093.1| hypothetical protein syc1383_d [Synechococcus elongatus PCC 6301] gi|56686351|dbj|BAD79573.1| hypothetical protein [Synechococcus elongatus PCC 6301] Length = 161 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/77 (41%), Positives = 42/77 (54%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P G V N +II+ N+ +D T HAEI AIR C+ L L LY + EPC Sbjct: 29 PFGCVITRNGEIIAEGFNQVLTERDPTWHAEIAAIRQACQHLQTVDLSGCTLYTSAEPCP 88 Query: 85 MCAAAISLARIRRLYYG 101 MCAAA+ A++ RL + Sbjct: 89 MCAAAVYWAKLERLVFA 105 >gi|58617314|ref|YP_196513.1| hypothetical protein ERGA_CDS_05870 [Ehrlichia ruminantium str. Gardel] gi|58416926|emb|CAI28039.1| Hypothetical protein ERGA_CDS_05870 [Ehrlichia ruminantium str. Gardel] Length = 62 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 2/59 (3%) Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AIS RI RLY+G N K GG+ENG + + CH PE+Y GI E+ + ++I + Sbjct: 1 MCAQAISFTRIHRLYFGVYNKKYGGVENGARVFHF--CHSIPEVYGGILEEENMKLITN 57 >gi|325978643|ref|YP_004288359.1| guanine deaminase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178571|emb|CBZ48615.1| guanine deaminase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 154 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A++EA + + + P G+V V + +II+ N D TAH E+ AIR Sbjct: 5 YMQKAIQEAYDGIKKGDGGPFGSVIVKDGEIIASGHNMVLAHHDPTAHGEVTAIRKAGEK 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L L L+ T EPC MC AA A I ++YYG + Sbjct: 65 LGTHDLSGTTLFTTGEPCPMCLAACLWANIDKIYYGCT 102 >gi|172038865|ref|YP_001805366.1| cytosine deaminase [Cyanothece sp. ATCC 51142] gi|171700319|gb|ACB53300.1| probable cytosine deaminase [Cyanothece sp. ATCC 51142] Length = 150 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA+ IP+G+V V +NKII R N+ + D HAEI +R RI Sbjct: 11 FMKAAIAEAKQGLKTGGIPIGSVLVKHNKIIGRGHNKRVQDGDPITHAEIDCLRNAGRIG 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + + + LY TL PC +CA A+ I+++ G S Sbjct: 71 NYQ---DTVLYSTLMPCYLCAGAVVQFNIKKVIAGES 104 >gi|58579260|ref|YP_197472.1| hypothetical protein ERWE_CDS_05960 [Ehrlichia ruminantium str. Welgevonden] gi|58417886|emb|CAI27090.1| Hypothetical protein ERWE_CDS_05960 [Ehrlichia ruminantium str. Welgevonden] Length = 62 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%) Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AIS ARI RLY+G N K GG+ENG + + CH PE+Y GI ++ + ++I + Sbjct: 1 MCAQAISFARIHRLYFGVYNKKYGGVENGARVFHF--CHSIPEVYGGILKEENMKLITN 57 >gi|126651196|ref|ZP_01723406.1| Guanine deaminase [Bacillus sp. B14905] gi|126592034|gb|EAZ86100.1| Guanine deaminase [Bacillus sp. B14905] Length = 152 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/76 (40%), Positives = 44/76 (57%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA V ++II+ GN D+TAHAEI+AIR + L L + +Y T EPC Sbjct: 22 PFGATIVRGDEIIAVVGNTMMRDTDITAHAEIVAIREASKKLGTMDLSDCVIYATCEPCP 81 Query: 85 MCAAAISLARIRRLYY 100 MC +AI + I+ ++Y Sbjct: 82 MCVSAIIWSGIKEVHY 97 >gi|227824209|ref|YP_002828182.1| CMP/dCMP deaminase, zinc-binding [Sinorhizobium fredii NGR234] gi|227343211|gb|ACP27429.1| CMP/dCMP deaminase, zinc-binding [Sinorhizobium fredii NGR234] Length = 171 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 7/138 (5%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ F+ A+ A+ + P GAV V N ++I R N + D T+HAE+ A+R Sbjct: 19 MQEEERFLREAVSLARTNLEKGGRPFGAVVVRNGEVIGRGVNEMLDTGDPTSHAELNAVR 78 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + ++ L + +Y + PC MC AA+ +A I + Y SN G + Y L+ Sbjct: 79 AAAKTIASLRLEDATVYASGHPCPMCLAAMRMAGITEIAYAHSNEDG-------EPYGLS 131 Query: 121 TCHHSPEIYPGISEQRSR 138 T E+ ++EQ R Sbjct: 132 TAAIYAELAKPLAEQAMR 149 >gi|322433246|ref|YP_004210467.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp. MP5ACTX9] gi|321165638|gb|ADW71340.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp. MP5ACTX9] Length = 168 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 7/105 (6%) Query: 3 KGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 K FM+ ALE+A+ + E P VG V V N I+ + N D TAHAE++ Sbjct: 5 KDLTFMAAALEQAR---IGQETPGGAQVGCVLVENGAIVCSSFNEGDLQFDPTAHAEMVG 61 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 IR C+ L V +Y TL+PC MC A A + R+ YGAS Sbjct: 62 IRRLCKERRSISLKGVTVYCTLQPCGMCTMACLWAGVSRIVYGAS 106 >gi|148266168|ref|YP_001232874.1| CMP/dCMP deaminase, zinc-binding [Geobacter uraniireducens Rf4] gi|146399668|gb|ABQ28301.1| CMP/dCMP deaminase, zinc-binding protein [Geobacter uraniireducens Rf4] Length = 160 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 1/97 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL EA+ IP+G+V V N +II R NR + H E+ A+ R Sbjct: 17 DTFMQAALAEAKQGQAEGGIPIGSVIVHNGRIIGRGHNRRVQKGSAILHGEMDALENAGR 76 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + E LY TL PC MC+ AI L I R+ G Sbjct: 77 -QTAAVYRECTLYTTLSPCAMCSGAILLYGIPRVIVG 112 >gi|83319309|ref|YP_424006.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283195|gb|ABC01127.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 147 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 1/109 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M N + + E++ A N+IPV + NN I+S A N + KD++ HAEI I Sbjct: 1 MDDFNNILDLLINESKKAIKHNDIPVSCCIIDSNNNILSLAINSRYKNKDISQHAEINVI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 L+ L + L TLEPC MC +AI +I +YY + K G Sbjct: 61 NDLISKLNSFNLSKYKLITTLEPCMMCYSAIKQVKINTIYYLVDSYKFG 109 >gi|317476774|ref|ZP_07936017.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides eggerthii 1_2_48FAA] gi|316906949|gb|EFV28660.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides eggerthii 1_2_48FAA] Length = 187 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 48/92 (52%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + ++I+ NR D TAHAE+ AIR C+ L L +Y + EPC Sbjct: 56 PFGAVIVRDGEVIATGVNRVVPNNDPTAHAEVNAIRNACQKLDTFQLEGCTVYSSCEPCP 115 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC +A+ A ++R+ YG + I+ F Sbjct: 116 MCLSALYWAGVKRICYGNTKADAKAIDFDDSF 147 >gi|196014346|ref|XP_002117032.1| hypothetical protein TRIADDRAFT_50979 [Trichoplax adhaerens] gi|190580254|gb|EDV20338.1| hypothetical protein TRIADDRAFT_50979 [Trichoplax adhaerens] Length = 151 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 6/92 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N +M A E A A + E+PVG V V NKII + N E+K+ T HAE++AI + Sbjct: 9 NEWMEIAFELANEALVAGEVPVGCVLVFGNKIIGKGRNEVNEVKNATRHAEMVAIEEAYK 68 Query: 65 IL-SQEILPEV-----DLYVTLEPCTMCAAAI 90 + ++ P V L VT+EPC MC+ A+ Sbjct: 69 WCENNQVRPSVAFSNSQLLVTVEPCIMCSMAL 100 >gi|301320513|gb|ADK69156.1| cytidine and deoxycytidylate deaminase zinc-binding region [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 147 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 2/114 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 M N + + +++ A N+IPV + NN I+S + N + KD++ HAEI AI Sbjct: 1 MDDFNNILDLMIYQSKKAIKHNDIPVCCCIIDDNNNILSMSINTRYKNKDISQHAEINAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 L+ L E L TLEPC MC +AI +I +YY + K GI+N Sbjct: 61 NKLINKLNTFNLSEYKLITTLEPCMMCYSAIKQVKIDTIYYLVDSYK-FGIQNN 113 >gi|45659288|ref|YP_003374.1| cytidine deaminase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45602534|gb|AAS72011.1| cytidine deaminase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 201 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 4/151 (2%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++ N +S L + +N R EIP K+IS N + D + H+EIL Sbjct: 49 IRTDNKILSDFLNKLENLVTRYREEIPSFTRIYHKEKLISETFNEVEKKSDSSFHSEILC 108 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 IR L L + L +LEPC MCA I L+RI ++ Y +G GI + Sbjct: 109 IRNAKEKLKTRYLADCMLITSLEPCLMCAGTILLSRIPKVVYLLPAKQGEGI-SSLSIEM 167 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + + PE++ I + S+ + FFK RR Sbjct: 168 IYSRNFFPELF-CIPTEISKNAFKSFFKVRR 197 >gi|81298931|ref|YP_399139.1| cytosine/adenosine deaminase-like [Synechococcus elongatus PCC 7942] gi|81167812|gb|ABB56152.1| Cytosine/adenosine deaminases-like [Synechococcus elongatus PCC 7942] Length = 161 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/77 (41%), Positives = 42/77 (54%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P G V N +II+ N+ +D T HAEI AIR C+ L L LY + EPC Sbjct: 29 PFGCVITRNGEIIAEGFNQVLTERDPTWHAEIAAIRQACQHLQTVDLSGCTLYTSAEPCP 88 Query: 85 MCAAAISLARIRRLYYG 101 MCAAA+ A++ RL + Sbjct: 89 MCAAAVYWAKLDRLVFA 105 >gi|298244121|ref|ZP_06967927.1| CMP/dCMP deaminase zinc-binding [Ktedonobacter racemifer DSM 44963] gi|297551602|gb|EFH85467.1| CMP/dCMP deaminase zinc-binding [Ktedonobacter racemifer DSM 44963] Length = 170 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 6/96 (6%) Query: 17 NAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ---EIL 71 NAAL ++ VG A+L+ ++I+ N+ +E +D HAE++ +R R LSQ E Sbjct: 24 NAAL-DKGSVGIAALLSRRDEILDLEHNQFQETRDAIDHAEMVVLRRMARYLSQLSEEEK 82 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 E+ LY +LEPC MC AAIS A ++R+ + A N G Sbjct: 83 RELTLYSSLEPCLMCMAAISFAGLKRVVFSAYNADG 118 >gi|187250528|ref|YP_001875010.1| cytosine/adenosine deaminase [Elusimicrobium minutum Pei191] gi|186970688|gb|ACC97673.1| Cytosine/adenosine deaminase [Elusimicrobium minutum Pei191] Length = 163 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 43/79 (54%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + K++++ NR D + HAE+ AIR C+ L L +Y + EPC Sbjct: 32 PFGAVIVKDGKMVAKGYNRVTSSNDPSLHAEVDAIRKACKKLGSFELTGCIIYSSCEPCP 91 Query: 85 MCAAAISLARIRRLYYGAS 103 MC AI AR + LY+ A Sbjct: 92 MCLGAIYWARPKALYFAAD 110 >gi|302817816|ref|XP_002990583.1| hypothetical protein SELMODRAFT_448085 [Selaginella moellendorffii] gi|300141751|gb|EFJ08460.1| hypothetical protein SELMODRAFT_448085 [Selaginella moellendorffii] Length = 1449 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+S A++EA + + P GAV V NN+++ N D TAHAE+ A+R C+ Sbjct: 64 FLSKAVDEAYKGVTCGDGGPFGAVVVRNNEVVVSCHNMVLRHTDPTAHAEVTAVREACKK 123 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L++ L + +++ + EPC MC AI L+RI+RL YGA Sbjct: 124 LNRLELSDCEIFASCEPCPMCFGAIHLSRIKRLVYGA 160 >gi|322805608|emb|CBZ03173.1| tRNA-specific adenosine-34 deaminase [Clostridium botulinum H04402 065] Length = 157 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 44/79 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P G+ V + ++I+ A N D TAH E+ IR C+ L+ L +LY T EPC Sbjct: 25 PFGSAIVKDGEVIAVAHNTVVGDNDPTAHGEVNVIRKACKKLNTFDLSGCELYTTSEPCP 84 Query: 85 MCAAAISLARIRRLYYGAS 103 MC +AI A I ++YYG + Sbjct: 85 MCMSAIIWANISKVYYGCT 103 >gi|218130011|ref|ZP_03458815.1| hypothetical protein BACEGG_01594 [Bacteroides eggerthii DSM 20697] gi|217987814|gb|EEC54140.1| hypothetical protein BACEGG_01594 [Bacteroides eggerthii DSM 20697] Length = 207 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 48/92 (52%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + ++I+ NR D TAHAE+ AIR C+ L L +Y + EPC Sbjct: 76 PFGAVIVRDGEVIATGVNRVVPNNDPTAHAEVNAIRNACQKLDTFQLEGCTVYSSCEPCP 135 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC +A+ A ++R+ YG + I+ F Sbjct: 136 MCLSALYWAGVKRICYGNTKADAKAIDFDDSF 167 >gi|194291404|ref|YP_002007311.1| guanine deaminase; cytidine and deoxycytidylate deaminase family [Cupriavidus taiwanensis LMG 19424] gi|193225308|emb|CAQ71250.1| Guanine deaminase; cytidine and deoxycytidylate deaminase family [Cupriavidus taiwanensis LMG 19424] Length = 155 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 48/93 (51%) Query: 16 QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75 +N RN P GAV V + +++RA N D +AHAE+ A+R R L + L Sbjct: 17 ENVRERNTWPFGAVVVKDGTVLARAVNEVDATCDPSAHAEMQAVRAASRALGKPDLSGCT 76 Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 +Y + PC MC A+ LA + ++Y SN G Sbjct: 77 VYASGYPCPMCLTAMYLAGVEAVFYAYSNEDGA 109 >gi|226948555|ref|YP_002803646.1| guanine deaminase [Clostridium botulinum A2 str. Kyoto] gi|226842608|gb|ACO85274.1| guanine deaminase [Clostridium botulinum A2 str. Kyoto] Length = 157 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 44/79 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P G+ V + ++I+ A N D TAH E+ IR C+ L+ L +LY T EPC Sbjct: 25 PFGSAIVKDGEVIAVAHNTVVGDNDPTAHGEVNVIRKACKKLNTFDLSGCELYTTSEPCP 84 Query: 85 MCAAAISLARIRRLYYGAS 103 MC +AI A I ++YYG + Sbjct: 85 MCMSAIIWANISKVYYGCT 103 >gi|295442884|ref|NP_596505.2| tRNA specific adenosine deaminase subunit Tad2 (predicted) [Schizosaccharomyces pombe 972h-] gi|259016150|sp|O94642|TAD2_SCHPO RecName: Full=tRNA-specific adenosine deaminase subunit tad2; AltName: Full=tRNA-specific adenosine-34 deaminase subunit tad2 gi|254745608|emb|CAB38514.2| tRNA specific adenosine deaminase subunit Tad2 (predicted) [Schizosaccharomyces pombe] Length = 389 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 56/121 (46%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P V V ++I R N HAE++AI + E LYVT+EPC Sbjct: 238 PGSCVFVYKGEVIGRGFNETNCSLSGIRHAELIAIEKILEHYPASVFKETTLYVTVEPCL 297 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 MCAAA+ I+ +Y+G N + GG + + S +YPG+ + ++++F Sbjct: 298 MCAAALKQLHIKAVYFGCGNDRFGGCGSVFSINKDQSIDPSYPVYPGLFYSEAVMLMREF 357 Query: 145 F 145 + Sbjct: 358 Y 358 >gi|324528898|gb|ADY48965.1| tRNA-specific adenosine deaminase 2 [Ascaris suum] Length = 134 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 52/81 (64%), Gaps = 1/81 (1%) Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 +EIL E LYVT+EPC MCA A+ +++R+ YGA+N + GG+ + + + H + Sbjct: 19 KEILKETTLYVTIEPCIMCACALYYLKLKRIVYGAANERFGGLGSVAN-REMYSSKHLIQ 77 Query: 128 IYPGISEQRSRQIIQDFFKER 148 I + ++R+ ++++DF+ ++ Sbjct: 78 IDANVDKERAVKMLKDFYDQQ 98 >gi|306831703|ref|ZP_07464860.1| guanine deaminase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426128|gb|EFM29243.1| guanine deaminase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 172 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A++EA + + + P G+V V + +II+ N D TAH E+ AIR Sbjct: 23 YMQKAIQEAYDGIKKGDGGPFGSVIVKDGEIIASGHNMVLAHHDPTAHGEVTAIRKAGEK 82 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L L L+ T EPC MC AA A I ++YYG + Sbjct: 83 LGTHDLSGTTLFTTGEPCPMCLAACLWANIDKIYYGCT 120 >gi|219113417|ref|XP_002186292.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209583142|gb|ACI65762.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 180 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 21/157 (13%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK----IISRAGNRNRELKDVTAHAEILAIRMGC 63 M AL A+ A E+PVG V V+ + ++S N+ +D T E IR G Sbjct: 1 MRQALRVAKAALDIGEVPVGCVIVMPTETGPVVVSHGANQVNATRDGTWKHEKQNIREGT 60 Query: 64 ------------RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 R E L + LYVT EPC MCAAA++ +I ++Y+G N K GG Sbjct: 61 GEWRNAYGWGSGRRFKPEELKKCRLYVTCEPCIMCAAALAQVQISKVYFGCRNDKFGGCG 120 Query: 112 NGTQFYTLATCHHSPEIYP---GISEQRSRQIIQDFF 145 + + HH+ YP G+ E + +++ F+ Sbjct: 121 SILHLHKDHPPHHAG--YPVSGGMLEDDAVGLLRSFY 155 >gi|220919906|ref|YP_002495209.1| CMP/dCMP deaminase zinc-binding [Methylobacterium nodulans ORS 2060] gi|219952326|gb|ACL62717.1| CMP/dCMP deaminase zinc-binding [Methylobacterium nodulans ORS 2060] Length = 160 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 2/100 (2%) Query: 7 FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM+ A+E ++ +L G V V + +I++ NR D T H EI AIR C+ Sbjct: 8 FMARAIELSEKTSLVESAGGVFGCVIVQDGEILAEGANRVVAENDPTWHGEIEAIRKACK 67 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L + LY + EPC MC AA A I+ +YY A+N Sbjct: 68 AQGSFKLRDATLYTSAEPCPMCMAAAYWAGIKAIYYAATN 107 >gi|302346851|ref|YP_003815149.1| guanine deaminase [Prevotella melaninogenica ATCC 25845] gi|302150909|gb|ADK97170.1| guanine deaminase [Prevotella melaninogenica ATCC 25845] Length = 155 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 50/110 (45%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+E + ++ P GAV N +II+ N D TAHAE+ IR C+ L Sbjct: 6 LMRRAIELSADSVRNGGGPFGAVIARNGEIIAEGSNGVTIYNDPTAHAEVSTIRKACQKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + L ++Y + EPC MC AI A + ++YY I F Sbjct: 66 NTFDLSGCEIYTSCEPCPMCFGAIYWAHLDKIYYANDRKDAADIGFDDDF 115 >gi|297582994|ref|YP_003698774.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens MLS10] gi|297141451|gb|ADH98208.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens MLS10] Length = 147 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 55/104 (52%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+E A+ + + P GA+ V + +++ A N+ D T H EI+ +R CR Sbjct: 8 WMRQAIELARASKIAGNDPFGALLVKDGEVVMTATNQIHTATDPTHHPEIVLVRDYCRQE 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 L +V LY + EPC MC+ A+ + + RL Y S+ + GI Sbjct: 68 GITDLKDVTLYTSCEPCVMCSGAMVWSNLGRLVYSVSHEQLLGI 111 >gi|146341264|ref|YP_001206312.1| putative cytidine/deoxycytidylate deaminase [Bradyrhizobium sp. ORS278] gi|146194070|emb|CAL78088.1| putative cytidine/deoxycytidylate deaminase [Bradyrhizobium sp. ORS278] Length = 165 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 52/104 (50%), Gaps = 1/104 (0%) Query: 1 MKKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +K FM A++ A Q+ A P+G V VL + I++ N D TAHAEI AI Sbjct: 4 LKTDEHFMQEAIKIATQDGADPALSPIGCVIVLGSDIVAAERNHVAAKHDATAHAEIEAI 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 R R L LY TL+PC MC A +++ R+ YGA Sbjct: 64 RAAGRGFDDGELRGATLYTTLQPCGMCTMASIWSKVGRIVYGAG 107 >gi|288803845|ref|ZP_06409271.1| guanine deaminase [Prevotella melaninogenica D18] gi|288333679|gb|EFC72128.1| guanine deaminase [Prevotella melaninogenica D18] Length = 155 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 50/110 (45%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+E + ++ P GAV N +II+ N D TAHAE+ IR C+ L Sbjct: 6 LMRRAIELSADSVRNGGGPFGAVIARNGEIIAEGSNGVTIYNDPTAHAEVSTIRKACQKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + L ++Y + EPC MC AI A + ++YY I F Sbjct: 66 NTFDLSGCEIYTSCEPCPMCFGAIYWAHLDKIYYANDRKDAADIGFDDDF 115 >gi|15229953|ref|NP_187181.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis thaliana] gi|6729040|gb|AAF27036.1|AC009177_26 unknown protein [Arabidopsis thaliana] gi|332640696|gb|AEE74217.1| Cytidine/deoxycytidylate deaminase-like protein [Arabidopsis thaliana] Length = 113 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 28/55 (50%), Positives = 39/55 (70%) Query: 48 KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 KD TAHAE++AIR C+ L++ L E ++Y + EPC MC AI L+R++RL Y A Sbjct: 6 KDPTAHAEVIAIREACKKLNEIKLSECEIYASCEPCPMCFGAIHLSRLKRLVYEA 60 >gi|297582578|ref|YP_003698358.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens MLS10] gi|297141035|gb|ADH97792.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens MLS10] Length = 152 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 51/107 (47%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++ A+ A P GA+ V + +++ R N D T HAE+ IR C Sbjct: 8 FMKQAIDLAKRAREEGNEPFGAILVKDGEVVMRGANHIHSGSDPTFHAELGLIRAYCSAY 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 L E LY + EPC MC+ A+ A + ++ Y S+ + I G Sbjct: 68 QVSDLSEYTLYTSCEPCVMCSGAMVWANLGKVVYSVSHDQLAEIAGG 114 >gi|147919375|ref|YP_686889.1| putative cytosine deaminase [uncultured methanogenic archaeon RC-I] gi|110622285|emb|CAJ37563.1| putative cytosine deaminase [uncultured methanogenic archaeon RC-I] Length = 144 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +VFM A++EA+ IP+G+V V+N +I+ N+ + D HAEI +R R Sbjct: 2 DVFMQAAIDEAKKGLAEGGIPIGSVMVINRRIVGSGHNKRVQDGDPVMHAEIDCLRSAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 + + + LY TL PC +CA A+ I+++ G S Sbjct: 62 VGRYK---DAVLYSTLMPCYLCAGAVVQFGIKKVIVGESK 98 >gi|170761087|ref|YP_001786677.1| guanine deaminase [Clostridium botulinum A3 str. Loch Maree] gi|169408076|gb|ACA56487.1| guanine deaminase [Clostridium botulinum A3 str. Loch Maree] Length = 157 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 44/79 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P G+ V + ++I+ A N D TAH E+ IR C+ L+ L +LY T EPC Sbjct: 25 PFGSAIVKDGEVIAVAHNTVIGDNDPTAHGEVNVIRKACKKLNTFDLSGCELYTTSEPCP 84 Query: 85 MCAAAISLARIRRLYYGAS 103 MC +AI A I ++YYG + Sbjct: 85 MCMSAIIWANISKVYYGCT 103 >gi|326330934|ref|ZP_08197234.1| guanine deaminase [Nocardioidaceae bacterium Broad-1] gi|325951292|gb|EGD43332.1| guanine deaminase [Nocardioidaceae bacterium Broad-1] Length = 159 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/154 (31%), Positives = 67/154 (43%), Gaps = 22/154 (14%) Query: 12 LEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 LE+A A+RN P GA+ + + ++ NR D +AHAEI+AIR C+ Sbjct: 7 LEQAVALAVRNVNNGGGPFGAIILRDGILLGTGQNRVTRDLDPSAHAEIVAIRSACKEAD 66 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA--SNPKGGGIENGTQFYTL-----A 120 L LY + EPC MC A AR+ R+ Y A + GG ++ FY L A Sbjct: 67 SFSLAGCTLYTSCEPCPMCLATALWARLDRVVYAADRDDAAKGGFDD-RAFYDLFGTGRA 125 Query: 121 TCHHS----------PEIYPGISEQRSRQIIQDF 144 HH PE Y ++Q D+ Sbjct: 126 NEHHDWPTKVDELRIPEAYDPFDAWLAKQDRTDY 159 >gi|282878399|ref|ZP_06287187.1| guanine deaminase [Prevotella buccalis ATCC 35310] gi|281299477|gb|EFA91858.1| guanine deaminase [Prevotella buccalis ATCC 35310] Length = 155 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 4/99 (4%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV + +II+ A N D TAHAE+ AIR L L D+Y + EPC Sbjct: 24 PFGAVIAKDGEIIAEASNTVTLDHDPTAHAEVNAIRQAAHKLGTFDLTGCDIYTSCEPCP 83 Query: 85 MCAAAISLARIRRLYYGASNPKGG---GIENGTQFYTLA 120 MC AI A + R+YY A+N K G ++ ++ +A Sbjct: 84 MCLGAIYWAHLDRIYY-ANNRKDAARIGFDDDFIYHEIA 121 >gi|227509717|ref|ZP_03939766.1| guanine deaminase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190641|gb|EEI70708.1| guanine deaminase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 160 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/97 (41%), Positives = 51/97 (52%), Gaps = 3/97 (3%) Query: 7 FMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FMS A +EA+N LR + P GAV I+ A N+ + +D TAHAEI AIR + Sbjct: 9 FMSLAAKEAENN-LRTGDGGPFGAVIANGQDILVTAHNQVLKDQDPTAHAEITAIRKATK 67 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 L L LY + PC MC AI + I+ YYG Sbjct: 68 KLGSYDLSGYTLYTSCYPCPMCLGAIIWSNIKVAYYG 104 >gi|225555098|gb|EEH03391.1| tRNA specific adenosine deaminase [Ajellomyces capsulatus G186AR] Length = 234 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 6/80 (7%) Query: 51 TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 T HAE LAI R + I E DLYVT+EPC MCA+A+ +IR +Y+G +N + GG Sbjct: 101 TRHAEFLAIEEVLRNYPRSIFRETDLYVTVEPCIMCASALRQYQIRHVYFGCANERFGGT 160 Query: 111 ENGTQFYTLATCHHSPEIYP 130 + H P I P Sbjct: 161 GG------VLNLHSDPGIDP 174 >gi|148379269|ref|YP_001253810.1| guanine deaminase [Clostridium botulinum A str. ATCC 3502] gi|153931455|ref|YP_001383643.1| guanine deaminase [Clostridium botulinum A str. ATCC 19397] gi|153935940|ref|YP_001387192.1| guanine deaminase [Clostridium botulinum A str. Hall] gi|148288753|emb|CAL82837.1| guanine deaminase [Clostridium botulinum A str. ATCC 3502] gi|152927499|gb|ABS32999.1| guanine deaminase [Clostridium botulinum A str. ATCC 19397] gi|152931854|gb|ABS37353.1| guanine deaminase [Clostridium botulinum A str. Hall] Length = 157 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 44/79 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P G+ V + ++I+ A N D TAH E+ IR C+ L+ L +LY T EPC Sbjct: 25 PFGSAIVKDGEVIAVAHNTVIGDNDPTAHGEVNVIRKACKKLNTFDLSGCELYTTSEPCP 84 Query: 85 MCAAAISLARIRRLYYGAS 103 MC +AI A I ++YYG + Sbjct: 85 MCMSAIIWANISKVYYGCT 103 >gi|94496883|ref|ZP_01303457.1| Putative cytosine/adenosine deaminase [Sphingomonas sp. SKA58] gi|94423559|gb|EAT08586.1| Putative cytosine/adenosine deaminase [Sphingomonas sp. SKA58] Length = 175 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 44/81 (54%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 + P+ A+ VL+ ++++ N E D TAHAE++A R ++ L LY TL+ Sbjct: 36 QDTPIAAIIVLDGAVLAQGVNETDERCDATAHAEMMAFRAAGQVHGDMDLRGATLYSTLQ 95 Query: 82 PCTMCAAAISLARIRRLYYGA 102 PC MC A +I R+ YGA Sbjct: 96 PCGMCTMASIWTKIGRIVYGA 116 >gi|225874834|ref|YP_002756293.1| guanine deaminase [Acidobacterium capsulatum ATCC 51196] gi|225793201|gb|ACO33291.1| guanine deaminase [Acidobacterium capsulatum ATCC 51196] Length = 162 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 32/76 (42%), Positives = 42/76 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V +K+++ A N D TAHAE+ AIR CR L L +Y + EPC Sbjct: 31 PFGAVIVREDKVVAEAANSVFTTNDPTAHAEVNAIRAACRNLGVFELRGCVIYTSSEPCP 90 Query: 85 MCAAAISLARIRRLYY 100 MC AA A + R+Y+ Sbjct: 91 MCLAACYWAHLDRIYF 106 >gi|283779562|ref|YP_003370317.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM 6068] gi|283438015|gb|ADB16457.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM 6068] Length = 160 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 1/95 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A+E A +N P G+V V KII R NR D +AHAEI+AIR C+ Sbjct: 10 FLEAAIELARENVRSGKGGPFGSVVVKEGKIIGRGENRVTSSLDPSAHAEIVAIRDACQQ 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L +Y + +PC MC +AI +RI R+ + Sbjct: 70 QQNFSLAGTTIYASCQPCPMCLSAIYWSRIDRVVF 104 >gi|75911133|ref|YP_325429.1| cytidine/deoxycytidylate deaminase [Anabaena variabilis ATCC 29413] gi|75704858|gb|ABA24534.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Anabaena variabilis ATCC 29413] Length = 143 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 3/97 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA IP+G+V V + KI+ R N+ + +D HAEI +R RI Sbjct: 4 FMQVAIQEATQGRQEGGIPIGSVLVKDGKILGRGHNKRVQDRDPVTHAEIDCLRNAGRIG 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 S LY TL PC +CA A+ I+++ G S Sbjct: 64 SYR---GTTLYSTLMPCYLCAGAVVQFGIKKVIVGES 97 >gi|224025654|ref|ZP_03644020.1| hypothetical protein BACCOPRO_02394 [Bacteroides coprophilus DSM 18228] gi|224018890|gb|EEF76888.1| hypothetical protein BACCOPRO_02394 [Bacteroides coprophilus DSM 18228] Length = 155 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 42/77 (54%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV N +I++ NR D TAHAE+ AIR ++L L ++Y + EPC Sbjct: 24 PFGAVIARNGEIVATGVNRVTPDCDPTAHAEVSAIRAAAKVLGTFDLSGCEIYTSCEPCP 83 Query: 85 MCAAAISLARIRRLYYG 101 MC AI A + +YYG Sbjct: 84 MCLGAIYWAHLDCMYYG 100 >gi|153941176|ref|YP_001390638.1| guanine deaminase [Clostridium botulinum F str. Langeland] gi|152937072|gb|ABS42570.1| guanine deaminase [Clostridium botulinum F str. Langeland] gi|295318715|gb|ADF99092.1| guanine deaminase [Clostridium botulinum F str. 230613] Length = 157 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 44/79 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P G+ V + ++I+ A N D TAH E+ IR C+ L+ L +LY T EPC Sbjct: 25 PFGSAIVKDGEMIAVAHNTVVGDNDPTAHGEVNVIRKACKKLNTFDLSGCELYTTSEPCP 84 Query: 85 MCAAAISLARIRRLYYGAS 103 MC +AI A I ++YYG + Sbjct: 85 MCMSAIIWANISKVYYGCT 103 >gi|34557713|ref|NP_907528.1| cytosine deaminase [Wolinella succinogenes DSM 1740] gi|34483430|emb|CAE10428.1| CYTOSINE DEAMINASE [Wolinella succinogenes] Length = 145 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ ALEEAQ IP+G+V V++ KI+ R N+ + HAE+ + R L Sbjct: 4 FLEAALEEAQKGLDEGGIPIGSVLVIDGKIVGRGHNQRVQKGSSILHAEMDCLENAGR-L 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 S + LY TL PC MC+ AI L I +L G Sbjct: 63 SASDYRKATLYSTLSPCDMCSGAILLYGIPKLVIG 97 >gi|198276275|ref|ZP_03208806.1| hypothetical protein BACPLE_02467 [Bacteroides plebeius DSM 17135] gi|198270717|gb|EDY94987.1| hypothetical protein BACPLE_02467 [Bacteroides plebeius DSM 17135] Length = 155 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 42/77 (54%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV + +I++ NR D TAHAE+ AIR + L L ++Y + EPC Sbjct: 24 PFGAVIAKDGEIVATGVNRVTPDCDPTAHAEVSAIRAAAKKLGTFDLSGCEIYTSCEPCP 83 Query: 85 MCAAAISLARIRRLYYG 101 MC AI A + R+YYG Sbjct: 84 MCLGAIYWAHLDRMYYG 100 >gi|149248448|ref|XP_001528611.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146448565|gb|EDK42953.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 271 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 4/140 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ AL A L+NE PV V +IIS N + T HAE +A+ R+ Sbjct: 11 FMAVALFVGYKALLKNETPVACVVTRGCQIISIGYNHTNITLNGTKHAEFIALG---RLK 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + LYVT+EPC MCA+ + ++ + YG N + GG + H P Sbjct: 68 EPVDYKNLTLYVTVEPCIMCASYLRQLGLKNVIYGCGNDRFGGAGTILPLHNDPKLPHKP 127 Query: 127 -EIYPGISEQRSRQIIQDFF 145 GI + Q++++F+ Sbjct: 128 LTCIDGICRTEAIQLLRNFY 147 >gi|227541098|ref|ZP_03971147.1| tRNA-specific adenosine deaminase [Corynebacterium glucuronolyticum ATCC 51866] gi|227183114|gb|EEI64086.1| tRNA-specific adenosine deaminase [Corynebacterium glucuronolyticum ATCC 51866] Length = 161 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 3/130 (2%) Query: 22 NEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 ++PV A AV + +I N + D TAHAE+ AIRM R IL +L VT Sbjct: 27 TDVPVAA-AVFDAEGTMIGWGTNERKATSDPTAHAEVQAIRMAARARRDYILENTELVVT 85 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPCTMCA A ARI L +GA K G + + + E+ G+ Sbjct: 86 LEPCTMCAGAFLAARIPSLVFGAFEEKTGAVGSVIDVVREPALPNRVEVVGGVLADECAA 145 Query: 140 IIQDFFKERR 149 ++ FF+++R Sbjct: 146 PLRAFFRDKR 155 >gi|332977120|gb|EGK13924.1| guanine deaminase [Desmospora sp. 8437] Length = 153 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 1/95 (1%) Query: 5 NVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 N +M A+E A +N P GA+ V + KI+ + N+ D T HAE+ AIR Sbjct: 4 NHWMQTAIELAYENTRREKGRPFGAIIVKDGKIVGKGVNQILATHDPTMHAELEAIREAS 63 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 R L+ L + +LY + +PC MC AAI A I R+ Sbjct: 64 RTLATSDLSDCELYASGKPCPMCLAAIYWANIHRV 98 >gi|150004479|ref|YP_001299223.1| cytidine/deoxycytidylate deaminase [Bacteroides vulgatus ATCC 8482] gi|254882789|ref|ZP_05255499.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 4_3_47FAA] gi|294778238|ref|ZP_06743664.1| guanine deaminase [Bacteroides vulgatus PC510] gi|319643895|ref|ZP_07998478.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_1_40A] gi|149932903|gb|ABR39601.1| cytidine/deoxycytidylate deaminase [Bacteroides vulgatus ATCC 8482] gi|254835582|gb|EET15891.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 4_3_47FAA] gi|294447866|gb|EFG16440.1| guanine deaminase [Bacteroides vulgatus PC510] gi|317384512|gb|EFV65478.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_1_40A] Length = 155 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 41/77 (53%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV + +II+ NR D TAHAE+ AIR L L ++Y + EPC Sbjct: 24 PFGAVIAKDGEIIATGANRVTSQCDPTAHAEVSAIRAAASKLGTFNLSGCEIYTSCEPCP 83 Query: 85 MCAAAISLARIRRLYYG 101 MC AI AR+ ++YY Sbjct: 84 MCLGAIYWARLDKMYYA 100 >gi|322830058|gb|EFZ33221.1| deaminase, putative [Trypanosoma cruzi] Length = 333 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 17/158 (10%) Query: 4 GNVFMSCALEEAQ-----NAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 G V + C L A+ NA L + P + A L N I +R N + AHAE + Sbjct: 162 GEVPVGCVLVPAEASCPANAGRLDDNNPNNSGASLGNLIAARGRNATNKEHHALAHAEFV 221 Query: 58 AIRMGCRILSQE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ R +++ L LYV +EPC MCAA + RI+++Y+G NP+ GG Sbjct: 222 AVEALLRDAAEKGRKPPASLAGYVLYVVVEPCIMCAAMLLYNRIKKVYFGCGNPRFGG-- 279 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQ---IIQDFFK 146 NGT A S Y R+ + ++Q+F+ Sbjct: 280 NGTVLAVHAAKSTSAPAYESCGGHRAEEAITLLQEFYS 317 >gi|153008613|ref|YP_001369828.1| zinc-binding CMP/dCMP deaminase [Ochrobactrum anthropi ATCC 49188] gi|151560501|gb|ABS13999.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum anthropi ATCC 49188] Length = 156 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 46/80 (57%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V K+I+ NR + D TAHAE+LA+R + L L ++Y + +PC Sbjct: 25 PFGAVVVKGGKVIATGVNRMQADCDPTAHAELLALRAAGKTLQSPRLDGCEVYASGQPCP 84 Query: 85 MCAAAISLARIRRLYYGASN 104 MC AA+ +A I ++ + SN Sbjct: 85 MCFAAMRMAGIEKIRFAYSN 104 >gi|162452397|ref|YP_001614764.1| cytosine/adenosine deaminase [Sorangium cellulosum 'So ce 56'] gi|161162979|emb|CAN94284.1| cytosine/adenosine deaminase [Sorangium cellulosum 'So ce 56'] Length = 163 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 4/104 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DVTAHAEILAIRMG 62 FM A++ + +A +P GAV V +++ + N+ R D TAHAE++ IR Sbjct: 13 FMQLAVDASSDALRAGNMPFGAVLVQGGQVLQVSCNQRRTANAGEGDCTAHAEVMLIREA 72 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 E L +Y + EPC MC+ A+ A + R+ Y AS P Sbjct: 73 TAAHGPEALAGGTVYASGEPCAMCSGALFWAGVSRIVYAASTPD 116 >gi|78777832|ref|YP_394147.1| cytosine deaminase [Sulfurimonas denitrificans DSM 1251] gi|78498372|gb|ABB44912.1| Cytosine deaminase [Sulfurimonas denitrificans DSM 1251] Length = 145 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A+EEA+ IP+G+V V++ KI+ R NR + HAE+ + R+ Sbjct: 4 FLQAAIEEAKKGLKEGGIPIGSVLVIDGKIVGRGHNRRVQDSSAILHAEMDCLENAGRMA 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + E + LY TL PC+MC+ A L +I ++ G Sbjct: 64 ASEYKKAI-LYSTLSPCSMCSGAALLYKIPKIIIG 97 >gi|257080390|ref|ZP_05574751.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|256988420|gb|EEU75722.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] Length = 158 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 4/152 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K+ F+ A+ A+ + + P GA+ V +N I+ N+ D T HAE IR Sbjct: 5 KQDERFIMQAISLAEASKNQGNEPFGAILVKDNTIVFTNENQIHIKSDPTFHAEHGLIRE 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFY 117 C+ L E LY + EPC MC+ AI +++ RL + A I E Sbjct: 65 FCQKYKITDLSEYTLYSSCEPCFMCSGAIVWSKLGRLVFSAYAKDLDSILGEKEESPCLL 124 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 P++ G+ + QI++D+F + + Sbjct: 125 VFEHSVWKPQVSGGVLRDKGVQILKDYFSDHK 156 >gi|227487346|ref|ZP_03917662.1| tRNA-specific adenosine deaminase [Corynebacterium glucuronolyticum ATCC 51867] gi|227092570|gb|EEI27882.1| tRNA-specific adenosine deaminase [Corynebacterium glucuronolyticum ATCC 51867] Length = 161 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 3/130 (2%) Query: 22 NEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 ++PV A AV + +I N + D TAHAE+ AIRM R IL +L VT Sbjct: 27 TDVPVAA-AVFDAEGTMIGWGTNERKATSDPTAHAEVQAIRMAARARRDYILENTELVVT 85 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPCTMCA A ARI L +GA K G + + + E+ G+ Sbjct: 86 LEPCTMCAGAFLAARIPSLVFGAFEEKTGAVGSVIDVVREPALPNRVEVVGGVLADDCAA 145 Query: 140 IIQDFFKERR 149 ++ FF+++R Sbjct: 146 PLRAFFRDKR 155 >gi|282891755|ref|ZP_06300236.1| hypothetical protein pah_c197o065 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498339|gb|EFB40677.1| hypothetical protein pah_c197o065 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 161 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 2/100 (2%) Query: 7 FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+ ++ A++ + GAV V + KII+ N+ + D T HAE+ AIR C+ Sbjct: 9 FMKRAIALSRKASIEEKTGGVFGAVIVKDGKIIAEGYNQVLKHNDPTWHAEMHAIREACK 68 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L + L DLY + E C MC +A A I +YY A+ Sbjct: 69 KLGKPHLEGCDLYTSAECCPMCLSAAYWAHIDHIYYAATT 108 >gi|149392256|gb|ABR25967.1| cytidine/deoxycytidylate deaminase family protein [Oryza sativa Indica Group] gi|215713595|dbj|BAG94732.1| unnamed protein product [Oryza sativa Japonica Group] Length = 116 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 27/54 (50%), Positives = 37/54 (68%) Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 D TAHAE+ AIR C+ L + L + ++Y + EPC MC A+ L+RI+RL YGA Sbjct: 7 DPTAHAEVTAIREACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGA 60 >gi|53712925|ref|YP_098917.1| cytidine/deoxycytidylate deaminase [Bacteroides fragilis YCH46] gi|60681139|ref|YP_211283.1| putative nucleotide deaminase [Bacteroides fragilis NCTC 9343] gi|253563096|ref|ZP_04840553.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_2_5] gi|265763023|ref|ZP_06091591.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 2_1_16] gi|52215790|dbj|BAD48383.1| cytidine/deoxycytidylate deaminase [Bacteroides fragilis YCH46] gi|60492573|emb|CAH07345.1| putative nucleotide deaminase [Bacteroides fragilis NCTC 9343] gi|251946872|gb|EES87154.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_2_5] gi|263255631|gb|EEZ26977.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 2_1_16] gi|301162628|emb|CBW22175.1| putative nucleotide deaminase [Bacteroides fragilis 638R] Length = 155 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 42/77 (54%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV + +I++ NR D TAHAE+ AIR L L ++Y + EPC Sbjct: 24 PFGAVIAKDGEIVATGVNRVTASCDPTAHAEVSAIRAAASKLGTFNLSGYEIYTSCEPCP 83 Query: 85 MCAAAISLARIRRLYYG 101 MC AI AR+ ++YYG Sbjct: 84 MCLGAIYWARLDKMYYG 100 >gi|319956637|ref|YP_004167900.1| cmp/dcmp deaminase zinc-binding protein [Nitratifractor salsuginis DSM 16511] gi|319419041|gb|ADV46151.1| CMP/dCMP deaminase zinc-binding protein [Nitratifractor salsuginis DSM 16511] Length = 155 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 47/94 (50%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V +I+S A N D TAHAEILAIR+ L + L LY T EPC Sbjct: 25 PFGAVIVYRGEIVSTAHNEVVLRNDPTAHAEILAIRLAGEKLQRFHLNGCTLYCTGEPCP 84 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 MC +AI A + R+ Y + + I F T Sbjct: 85 MCFSAIHWAHLDRVIYCNTKEEAAKIGFDDTFIT 118 >gi|239996129|ref|ZP_04716653.1| cytidine/deoxycytidylate deaminase family protein [Alteromonas macleodii ATCC 27126] Length = 109 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 42/79 (53%) Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130 L + LYVTLEPC+MCA + AR++R+ +GA + K G + +H E+ Sbjct: 12 LIDATLYVTLEPCSMCAGMLVHARVKRVVFGAKDAKTGAAGSVMNLLQHPALNHQLEVVS 71 Query: 131 GISEQRSRQIIQDFFKERR 149 G+ + DFF++RR Sbjct: 72 GVLADECANKLSDFFRKRR 90 >gi|157073959|ref|NP_001096831.1| tRNA-specific adenosine deaminase-like protein 3 [Rattus norvegicus] gi|81882326|sp|Q561R2|ADAT3_RAT RecName: Full=tRNA-specific adenosine deaminase-like protein 3; AltName: Full=tRNA-specific adenosine-34 deaminase subunit ADAT3 gi|62531223|gb|AAH93394.1| Adat3 protein [Rattus norvegicus] gi|149034525|gb|EDL89262.1| secretory carrier membrane protein 4, isoform CRA_e [Rattus norvegicus] Length = 349 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 9/86 (10%) Query: 64 RILSQEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--Y 117 R L ++ LP V DLYVT EPC MCA A+ ARI+R++YGA +P G GT+F + Sbjct: 266 RKLDEDSLPYVCTGYDLYVTREPCVMCAMALVHARIQRVFYGAPSPDGA---LGTRFRVH 322 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQD 143 +H +++ GI E + RQ+ D Sbjct: 323 ARPDLNHRFQVFRGILEDQCRQLDPD 348 >gi|51245328|ref|YP_065212.1| cytidine and deoxycytidylate deaminase family protein [Desulfotalea psychrophila LSv54] gi|50876365|emb|CAG36205.1| related to cytidine and deoxycytidylate deaminase family protein [Desulfotalea psychrophila LSv54] Length = 169 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 4/148 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM AL +A+ A + E PVG V V ++++ RN + HAE+ A+R Sbjct: 1 MDVDESFMEVALAQAERALVAGEFPVGCVIVSQGEVVAVGERRNSVSANELDHAEMNALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + ++ +Y T+EPC MC +A+ + +R + Y + GGG LA Sbjct: 61 TLLAQGQPADMEKLVVYSTMEPCLMCYSALIVNGVRNIVYAYEDAMGGG--TSLPLSQLA 118 Query: 121 TCHHS--PEIYPGISEQRSRQIIQDFFK 146 + I P + RS ++ Q FF Sbjct: 119 PLYAGIRMNIRPHVLRARSLRLFQQFFS 146 >gi|167846243|ref|ZP_02471751.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei B7210] Length = 141 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/79 (45%), Positives = 49/79 (62%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I+R N D +AHAE+ A+R R L +P +LYVTLE Sbjct: 63 GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 122 Query: 82 PCTMCAAAISLARIRRLYY 100 PC MC+ AI ARI R+ + Sbjct: 123 PCLMCSGAIMHARIARVVF 141 >gi|325270746|ref|ZP_08137337.1| guanine deaminase [Prevotella multiformis DSM 16608] gi|324986862|gb|EGC18854.1| guanine deaminase [Prevotella multiformis DSM 16608] Length = 155 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 41/92 (44%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV N +II+ N D TAHAE+ IR C L L ++Y + EPC Sbjct: 24 PFGAVIARNGEIIAEGSNGVTIYNDPTAHAEVSVIRKACHQLHTFDLTGCEIYTSCEPCP 83 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC AI A + ++YY I F Sbjct: 84 MCLGAIYWAHLDKIYYANDRKDAAAIGFDDDF 115 >gi|303390913|ref|XP_003073687.1| deoxycytidylate deaminase [Encephalitozoon intestinalis ATCC 50506] gi|303302834|gb|ADM12327.1| deoxycytidylate deaminase [Encephalitozoon intestinalis ATCC 50506] Length = 149 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 7/100 (7%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL++A+ A + E+PVG V V + ++S++ N K HAE+++IR Sbjct: 9 SFFMDMALDQAEKAFDQLEVPVGCVVVRDGIVVSKSHNMTNANKSPLDHAEVISIR---- 64 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 YVT EPC MC + + R+YYG N Sbjct: 65 ---STDCSNSTFYVTCEPCIMCMGILGRLKGVRVYYGCKN 101 >gi|118580396|ref|YP_901646.1| cytosine deaminase [Pelobacter propionicus DSM 2379] gi|118503106|gb|ABK99588.1| Cytosine deaminase [Pelobacter propionicus DSM 2379] Length = 145 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ IP+G++ V ++ R NR + V HAE+ A+ R + Sbjct: 4 FMQAALEEARKGLAEGGIPIGSLVVHRGAVLGRGHNRRVQKGSVILHAEMDALENAGR-M 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 I E LY TL PC MCA AI L I R+ G Sbjct: 63 PAAIYRESVLYTTLSPCPMCAGAILLYGIPRVVIG 97 >gi|296118010|ref|ZP_06836592.1| tRNA-specific adenosine deaminase [Corynebacterium ammoniagenes DSM 20306] gi|295968896|gb|EFG82139.1| tRNA-specific adenosine deaminase [Corynebacterium ammoniagenes DSM 20306] Length = 151 Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 44/130 (33%), Positives = 63/130 (48%), Gaps = 2/130 (1%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79 ++PVGAV + ++ NR L D TAHAE+ AIR R L +L VT Sbjct: 17 GDVPVGAVIYGPDGAELATGVNRREALADPTAHAEVEAIRAAVREYGDSWRLEGCELVVT 76 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA A AR+ + +GA PK G + PE+ G+ E ++ Sbjct: 77 LEPCAMCAGAAQAARVSSVVFGAWEPKTGACGSLVDVLRAPGALFVPEVRAGVLEAECQE 136 Query: 140 IIQDFFKERR 149 +++ FF+ R Sbjct: 137 VLRKFFENLR 146 >gi|197117867|ref|YP_002138294.1| zinc-dependent cytosine deaminase [Geobacter bemidjiensis Bem] gi|197087227|gb|ACH38498.1| zinc-dependent cytosine deaminase [Geobacter bemidjiensis Bem] Length = 145 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 1/100 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +++M A+EEA+ IP+G+V V I+ R NR + H E+ A+ R Sbjct: 2 DIYMQSAIEEAKKGLGEGGIPIGSVLVHKGLILGRGHNRRVQKGSSILHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 + +Q + E LY TL PC+MC+ AI L I R+ G ++ Sbjct: 62 LPAQ-VYRESVLYTTLSPCSMCSGAILLYGIPRVVIGENS 100 >gi|83775265|dbj|BAE65387.1| unnamed protein product [Aspergillus oryzae] Length = 145 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 52/95 (54%) Query: 51 TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 T HAE +A+ R + +L LYVT+EPC MCA+A+ RI+ +Y+G SN + GG Sbjct: 14 TRHAEFIALERMLRNYPKSLLRSTKLYVTVEPCVMCASALRQYRIQAVYFGCSNERFGGT 73 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + +T + +Y G+ + + +++ F+ Sbjct: 74 GSILSLHTDFSIDPPYPVYGGLFSKEAVMLLRRFY 108 >gi|312378080|gb|EFR24748.1| hypothetical protein AND_10447 [Anopheles darlingi] Length = 186 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 15/154 (9%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVL-----NNKIISRAGNRNRELKDVTAHAEILAI 59 + FM AL++A+ A E+PVG V V + II+R N E K+ T H E + I Sbjct: 2 DCFMEDALQQARLANDLKEVPVGCVFVYGPNEGDGVIIARGCNLVNETKNATRHVEFICI 61 Query: 60 RMGCRIL-------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 + I + + VT+EPC MCAAA+ +R + YG N + GG Sbjct: 62 DQALEYARAHGFEPPESIFTSISVVVTVEPCIMCAAALLNLGVREIVYGCRNDRFGG--- 118 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 T + I G+ + +++++F+K Sbjct: 119 STVLDVARLLKSNIPIRGGVRGDEAMELLKEFYK 152 >gi|310777941|ref|YP_003966274.1| CMP/dCMP deaminase zinc-binding protein [Ilyobacter polytropus DSM 2926] gi|309747264|gb|ADO81926.1| CMP/dCMP deaminase zinc-binding protein [Ilyobacter polytropus DSM 2926] Length = 159 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Query: 25 PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P GA+ V I+ +GN KD+T HAE ++ + S+E L E LY T EPC Sbjct: 24 PFGALLVDKEGNILIESGNIEVTEKDITGHAETTVAKLAGKKYSKEFLWETTLYTTAEPC 83 Query: 84 TMCAAAISLARIRRLYYGASNPK 106 MC AI A I + YG S K Sbjct: 84 CMCTGAIYWANIGNVVYGISEKK 106 >gi|307109298|gb|EFN57536.1| hypothetical protein CHLNCDRAFT_20896 [Chlorella variabilis] Length = 156 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 41/92 (44%), Positives = 52/92 (56%), Gaps = 3/92 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALE+A+ A E+PVGAV V ++++ A N D TAHAE+L IR Sbjct: 11 FMRLALEQARLAFDDGEVPVGAVLVSGGGQVLAAARNAAEGAADPTAHAELLCIRQAATA 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 L + LYVTLEPC MCA A L ++RR Sbjct: 71 AGGWRLLDATLYVTLEPCPMCAGA--LLQVRR 100 >gi|296455801|gb|ADH22036.1| cytosine deaminase [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 155 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 2/114 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M N + + +++ A N+IPV + NN I+S + N + K+++ HAEI AI Sbjct: 9 MNDFNNILDLMIYQSKKAIKHNDIPVCCCIIDSNNNILSMSINTRYKNKNISQHAEINAI 68 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 L+ L E L TLEPC MC +AI +I +YY + K GI+N Sbjct: 69 NKLINKLNTFNLSEYKLITTLEPCMMCYSAIKQVKINTIYYLVDSYK-FGIQNN 121 >gi|226314093|ref|YP_002773989.1| hypothetical protein BBR47_45080 [Brevibacillus brevis NBRC 100599] gi|226097043|dbj|BAH45485.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 150 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 42/76 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA V N+II+ NR D + HAE++AIR C+ L L ++Y T EPC Sbjct: 22 PFGAAVVKGNEIIAVCSNRMMADMDPSQHAEMVAIREACKALGTMDLAGCEIYATCEPCP 81 Query: 85 MCAAAISLARIRRLYY 100 MC AI + I+ ++Y Sbjct: 82 MCVGAIIWSGIKVVHY 97 >gi|163851859|ref|YP_001639902.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1] gi|163663464|gb|ABY30831.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1] Length = 301 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 59/122 (48%), Gaps = 22/122 (18%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL----NNKIISRAGNRNR--ELKDVTAHAEIL 57 GN +M A EEA+ + P GAV + N++I N N E +D TAHAE+ Sbjct: 125 GNQWMRMASEEARISVENGGGPFGAVILQIDDETNEVIRYWRNHNHVPEWRDPTAHAEVS 184 Query: 58 AIRMGCRILS----------QEILPE------VDLYVTLEPCTMCAAAISLARIRRLYYG 101 AIR CR L + LP+ +Y + EPC MC AAI ARI +L + Sbjct: 185 AIRAACRELGVFSLASIKKEESKLPQKGATSHTVIYSSAEPCPMCYAAIYWARIPKLVFA 244 Query: 102 AS 103 A+ Sbjct: 245 AT 246 >gi|255008429|ref|ZP_05280555.1| putative nucleotide deaminase [Bacteroides fragilis 3_1_12] Length = 149 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 41/77 (53%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV + +I+ NR D TAHAE+ AIR L L ++Y + EPC Sbjct: 18 PFGAVIAKDGEIVVTGVNRVTASCDPTAHAEVTAIRAAASKLGTFNLSGYEIYTSCEPCP 77 Query: 85 MCAAAISLARIRRLYYG 101 MC AI AR+ ++YYG Sbjct: 78 MCLGAIYWARLDKMYYG 94 >gi|313146154|ref|ZP_07808347.1| cytidine/deoxycytidylate deaminase [Bacteroides fragilis 3_1_12] gi|313134921|gb|EFR52281.1| cytidine/deoxycytidylate deaminase [Bacteroides fragilis 3_1_12] Length = 155 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 41/77 (53%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV + +I+ NR D TAHAE+ AIR L L ++Y + EPC Sbjct: 24 PFGAVIAKDGEIVVTGVNRVTASCDPTAHAEVTAIRAAASKLGTFNLSGYEIYTSCEPCP 83 Query: 85 MCAAAISLARIRRLYYG 101 MC AI AR+ ++YYG Sbjct: 84 MCLGAIYWARLDKMYYG 100 >gi|109900168|ref|YP_663423.1| cytosine deaminase [Pseudoalteromonas atlantica T6c] gi|109702449|gb|ABG42369.1| Cytosine deaminase [Pseudoalteromonas atlantica T6c] Length = 145 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA+ IP+G+V V NNKII R N+ + H E+ A+ R Sbjct: 4 FMQAAIDEAKLGLAEGGIPIGSVLVHNNKIIGRGHNKRVQSGSPILHGEMDALENAGRQP 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 ++ + E LY TL PC+MC+ I L I ++ G Sbjct: 64 AR-VYKESTLYTTLSPCSMCSGTILLYGIPKVVIG 97 >gi|186686613|ref|YP_001869809.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102] gi|186469065|gb|ACC84866.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102] Length = 143 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 3/97 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA+ IP+G+V V + KI+ R N+ + D HAEI +R R+ Sbjct: 4 FMEAAIQEAKQGREEGGIPIGSVLVKDGKILGRGHNKRVQDGDPVTHAEIDCLRNAGRVG 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 S LY TL PC +CA A+ I+++ G S Sbjct: 64 SYR---GTTLYSTLMPCYLCAGAVVQFGIKKVIVGES 97 >gi|168178781|ref|ZP_02613445.1| guanine deaminase [Clostridium botulinum NCTC 2916] gi|182671437|gb|EDT83411.1| guanine deaminase [Clostridium botulinum NCTC 2916] Length = 157 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 43/79 (54%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P G+ V ++I+ A N D TAH E+ IR C+ L+ L +LY T EPC Sbjct: 25 PFGSAIVKAGQVIAVAHNTVVGDNDPTAHGEVNVIRKACKKLNTFDLSGCELYTTSEPCP 84 Query: 85 MCAAAISLARIRRLYYGAS 103 MC +AI A I ++YYG + Sbjct: 85 MCMSAIIWANISKVYYGCT 103 >gi|311277409|ref|YP_003939640.1| CMP/dCMP deaminase zinc-binding protein [Enterobacter cloacae SCF1] gi|308746604|gb|ADO46356.1| CMP/dCMP deaminase zinc-binding protein [Enterobacter cloacae SCF1] Length = 151 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 2/93 (2%) Query: 14 EAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71 +A + N I P GA V N +++ N D +AHAE++AIR C+ L Sbjct: 9 DATIHGMENNIGGPFGATIVRNGEVVVAISNTMTRDTDPSAHAELVAIREACKKRGTFDL 68 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 + ++Y T EPC MC A I I+++YY +++ Sbjct: 69 SDCEIYATCEPCPMCVAVIIWTGIKKVYYCSTH 101 >gi|256383711|gb|ACU78281.1| cytosine deaminase [Mycoplasma mycoides subsp. capri str. GM12] gi|256384542|gb|ACU79111.1| cytosine deaminase [Mycoplasma mycoides subsp. capri str. GM12] Length = 147 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 2/114 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M N + + +++ A N+IPV + NN I+S + N + K+++ HAEI AI Sbjct: 1 MNDFNNILDLMIYQSKKAIKHNDIPVCCCIIDSNNNILSMSINTRYKNKNISQHAEINAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 L+ L E L TLEPC MC +AI +I +YY + K GI+N Sbjct: 61 NKLINKLNTFNLSEYKLITTLEPCMMCYSAIKQVKINTIYYLVDSYK-FGIQNN 113 >gi|68466625|ref|XP_722508.1| potential tRNA wobble position adenosine deaminase subunit [Candida albicans SC5314] gi|68466908|ref|XP_722369.1| potential tRNA wobble position adenosine deaminase subunit [Candida albicans SC5314] gi|46444339|gb|EAL03614.1| potential tRNA wobble position adenosine deaminase subunit [Candida albicans SC5314] gi|46444487|gb|EAL03761.1| potential tRNA wobble position adenosine deaminase subunit [Candida albicans SC5314] Length = 281 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 4/110 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M+ +L A L NE PV + V ++KIIS N + T HAE +A++ Sbjct: 11 YMAISLFVGYKALLNNETPVSCIVVDSKSDKIISIGYNYTNHSLNGTQHAEFIALQRFGE 70 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 S ++ LYVT+EPC MCA+ + I+++ +G N + GG NGT Sbjct: 71 QKSSIDYNDLILYVTVEPCIMCASYLRQLGIKKVIFGCGNDRFGG--NGT 118 >gi|194334351|ref|YP_002016211.1| CMP/dCMP deaminase [Prosthecochloris aestuarii DSM 271] gi|194312169|gb|ACF46564.1| CMP/dCMP deaminase zinc-binding [Prosthecochloris aestuarii DSM 271] Length = 155 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 44/80 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA+ V N ++++ NR D T+HAE+ AIR + L L +LY + EPC Sbjct: 24 PFGALIVRNGEVVATGVNRVTRENDPTSHAEVNAIRAASQKLKTFKLEGCELYSSCEPCP 83 Query: 85 MCAAAISLARIRRLYYGASN 104 MC AI A + +YYGA + Sbjct: 84 MCMGAIYWAGVTTVYYGADS 103 >gi|304383618|ref|ZP_07366077.1| guanine deaminase [Prevotella marshii DSM 16973] gi|304335142|gb|EFM01413.1| guanine deaminase [Prevotella marshii DSM 16973] Length = 155 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 44/95 (46%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV + +II+ N + D TAHAE+ AIR R L L ++Y + EPC Sbjct: 24 PFGAVIAKDGEIIAEGANSVTKDHDPTAHAEVNAIRKASRKLGTFDLSGCEIYTSCEPCP 83 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 MC AI A + ++YY I F L Sbjct: 84 MCLGAIYWAHLDKIYYANDRKDAARIGFDDDFIYL 118 >gi|261879068|ref|ZP_06005495.1| guanine deaminase [Prevotella bergensis DSM 17361] gi|270334349|gb|EFA45135.1| guanine deaminase [Prevotella bergensis DSM 17361] Length = 155 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV N +++ A N D TAHAE+ AIR+ C L L ++Y + EPC Sbjct: 24 PFGAVIARNGVVLAEASNSVTIDHDPTAHAEVNAIRVACDRLHTFDLSGCEIYCSCEPCP 83 Query: 85 MCAAAISLARIRRLYYGASNPKGGG 109 MC AI AR+ +YY A+N K Sbjct: 84 MCLGAIYWARLDHIYY-ANNRKAAA 107 >gi|239832713|ref|ZP_04681042.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum intermedium LMG 3301] gi|239824980|gb|EEQ96548.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum intermedium LMG 3301] Length = 156 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 55/104 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M F+ A++ A + + P GAV V ++I+ NR + D TAHAE+LA+R Sbjct: 1 MSSDGTFLDQAIKLAFDNIEQGGRPFGAVVVKGGEVIATGVNRMQADCDPTAHAELLALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 + L L ++Y + +PC MC AA+ +A + ++ + SN Sbjct: 61 AAGKALRSPRLDGCEVYASGQPCPMCFAAMRMAGVEKIRFAYSN 104 >gi|114703609|emb|CAL46259.1| cytidine deaminase [Paspalum simplex] Length = 148 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 1/96 (1%) Query: 7 FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+S A+EEA + + P GAV V N++++ N + D TAHAE+ AIR C+ Sbjct: 34 FLSKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIREACKK 93 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 L + L + ++Y + EPC MC A+ L I+RL YG Sbjct: 94 LGKIELSDCEIYASCEPCPMCFGAVYLFGIKRLVYG 129 >gi|308160868|gb|EFO63335.1| Cytosine deaminase, putative [Giardia lamblia P15] Length = 165 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 4/138 (2%) Query: 12 LEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 +EA A + E+PVG A+ + I++ N + ++ T HAE++A+ ++ S Sbjct: 5 FKEASLALVEREVPVGCAIVDSDGHILATGRNATNKTRNSTYHAELVALA---QLPSGIN 61 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130 L LYVT+EPC MCAAA+S+ + + Y A N K GG + + Sbjct: 62 LSNCVLYVTIEPCIMCAAALSIVGLTNIIYFARNNKFGGCGSVLDVNNHIESPWTKLNAK 121 Query: 131 GISEQRSRQIIQDFFKER 148 I ++R+ ++Q+FF+ + Sbjct: 122 YIHDERAIYLLQEFFERK 139 >gi|73670513|ref|YP_306528.1| dCMP deaminase [Methanosarcina barkeri str. Fusaro] gi|72397675|gb|AAZ71948.1| dCMP deaminase [Methanosarcina barkeri str. Fusaro] Length = 157 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 2/117 (1%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +FM A+E + + P GAV V N +I++ + N L D TAHAEI IR R Sbjct: 7 LFMKRAIELSLENVKKGGGPFGAVIVRNGEILAESCNMVTALNDPTAHAEINVIREAARK 66 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG--ASNPKGGGIENGTQFYTLA 120 L L +Y + EPC MC AI ARI ++ + AS+ + G + + +A Sbjct: 67 LETFDLSGCTIYASCEPCPMCLGAIYWARIGKVVFANTASDAQKIGFADSLIYSEIA 123 >gi|88604201|ref|YP_504379.1| CMP/dCMP deaminase, zinc-binding [Methanospirillum hungatei JF-1] gi|88189663|gb|ABD42660.1| CMP/dCMP deaminase, zinc-binding protein [Methanospirillum hungatei JF-1] Length = 274 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 3/105 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA+ IP+G+V V + II R NR + D HAEI ++ RI Sbjct: 134 FMEAAIQEAEKGKEEGGIPIGSVLVRDGVIIGRGHNRRVQNNDPMVHAEIDCLQNAGRIG 193 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 S + + LY TL PC +CA A+ I R+ G S G E Sbjct: 194 SYQ---DCILYSTLMPCFLCAGAVVQFHIPRVIVGESRTFSGARE 235 >gi|288934196|ref|YP_003438255.1| CMP/dCMP deaminase zinc-binding protein [Klebsiella variicola At-22] gi|290508399|ref|ZP_06547770.1| cytidine/deoxycytidylate deaminase [Klebsiella sp. 1_1_55] gi|288888925|gb|ADC57243.1| CMP/dCMP deaminase zinc-binding protein [Klebsiella variicola At-22] gi|289777793|gb|EFD85790.1| cytidine/deoxycytidylate deaminase [Klebsiella sp. 1_1_55] Length = 152 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 11/141 (7%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + ++ AL A+ P GAV V +++I++ A N D TAHAE+ A+R Sbjct: 1 MSADDRYLQRALALAKQNIADGGRPFGAVLVRHDEIVAEAVNTFHLNGDPTAHAELNAVR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L E+L E +Y + +PC MC +A+ L +R +++ SN ++G F Sbjct: 61 ELAARLGSEVLRECVIYASGQPCPMCLSALYLTGVREVFFANSN------QDGEPFQLST 114 Query: 121 TCHHSPEIYPGISEQRSRQII 141 T IY + + SRQ + Sbjct: 115 TA-----IYQQLQQPLSRQTL 130 >gi|218438113|ref|YP_002376442.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424] gi|218170841|gb|ACK69574.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424] Length = 147 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 12/142 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A+ EA+ IP+G+V V + KI+ R N+ + D HAEI +R R Sbjct: 6 DSFMQAAIAEARQGLQEGGIPIGSVLVKDGKILGRGHNKRVQDNDPVTHAEIDCLRNAGR 65 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + + LY TL PC +CA A+ I+++ G S G E H Sbjct: 66 VGQYQ---DTILYSTLMPCYLCAGAVVQFGIKKVIAGESATFAGARE-------FMESHG 115 Query: 125 SPEIYPGISEQRSRQIIQDFFK 146 I ++E +Q++QDF + Sbjct: 116 VEVIDLNLNE--CKQLMQDFIE 135 >gi|186682609|ref|YP_001865805.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102] gi|186465061|gb|ACC80862.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102] Length = 141 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 4/97 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ + P GAV V +N++++ A N D +AHAEI IR L Sbjct: 6 FMRLALAQAK----EGDTPYGAVIVKDNEVVAVAHNTVSRDNDPSAHAEINVIRSLTAKL 61 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L +Y T EPC MCA A + + + YGAS Sbjct: 62 KNHFLEGYSIYTTCEPCPMCATACVWSGLSEIVYGAS 98 >gi|333031276|ref|ZP_08459337.1| Guanine deaminase [Bacteroides coprosuis DSM 18011] gi|332741873|gb|EGJ72355.1| Guanine deaminase [Bacteroides coprosuis DSM 18011] Length = 155 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 47/96 (48%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 R+ P GAV + +I++ NR + D TAHAE+ AIR L L ++Y + Sbjct: 20 RDGGPFGAVIAKDGEIVATGVNRVTDSCDPTAHAEVSAIRAAAEKLKTFDLSGYEIYSSC 79 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 EPC MC AI AR+ +LY+ + I F Sbjct: 80 EPCPMCLGAIYWARLDKLYFANTKTDAKDIGFDDSF 115 >gi|226330044|ref|ZP_03805562.1| hypothetical protein PROPEN_03957 [Proteus penneri ATCC 35198] gi|225200839|gb|EEG83193.1| hypothetical protein PROPEN_03957 [Proteus penneri ATCC 35198] Length = 324 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 54/95 (56%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N F+ A+ A + P GAV V N ++I+ A N+ D TAHAE+LA+R + Sbjct: 209 NQFIQQAISLAMDNVKVGGRPFGAVIVNNGQVIASAVNQIVTTNDPTAHAELLALREAGK 268 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 +L + L + +Y + +PC MC AA+ +A I +++ Sbjct: 269 VLGRTKLDDCIVYASGQPCPMCLAAMRMAGISKIF 303 >gi|50305461|ref|XP_452690.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641823|emb|CAH01541.1| KLLA0C10989p [Kluyveromyces lactis] Length = 238 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 6/118 (5%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILA 58 M + + M A+ A+ A E PV + V + NK+I+ N E +HAE + Sbjct: 1 MSQDLLHMRTAITLAKYALDHEETPVACIFVHSKLNKVIAYGMNGTNESISGISHAEFMG 60 Query: 59 IRMGCRILSQE--ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 I+ + IL EV LYVT+EPC MCA+A+ I+++ +G N + GG NG+ Sbjct: 61 IKQIQEKYGTDPKILSEVVLYVTVEPCIMCASALKQLGIKKVVFGCGNERFGG--NGS 116 >gi|71423764|ref|XP_812564.1| deaminase [Trypanosoma cruzi strain CL Brener] gi|70877358|gb|EAN90713.1| deaminase, putative [Trypanosoma cruzi] Length = 202 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 17/157 (10%) Query: 4 GNVFMSCALEEAQ-----NAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 G V + C L A+ NA L + P + A L + I +R N + AHAE + Sbjct: 31 GEVPVGCVLVPAEATCPANAGRLDDNNPNNSGASLGSLIAARGRNATNKEHHALAHAEFV 90 Query: 58 AIRMGCRILSQE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ R +++ L LYV +EPC MCAA + RI+++Y+G NP+ GG Sbjct: 91 AVEALLRDAAEKGRKPPASLAGYVLYVVVEPCIMCAAMLLYNRIKKVYFGCGNPRFGG-- 148 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQ---IIQDFF 145 NGT A S Y R+ + ++Q+F+ Sbjct: 149 NGTVLAVHAAKSTSAPAYESCGGHRAEEAIALLQEFY 185 >gi|281421106|ref|ZP_06252105.1| guanine deaminase [Prevotella copri DSM 18205] gi|281404641|gb|EFB35321.1| guanine deaminase [Prevotella copri DSM 18205] Length = 155 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 50/110 (45%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+E ++N+ P GAV + II+ A N D TAHAE+ IR R L Sbjct: 6 LMHRAIELSKNSVKTGGGPFGAVIAKDGIIIAEASNSVTIDLDPTAHAEVNCIRQATRKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L ++Y + EPC MC AI A + R+YY I +F Sbjct: 66 KTFNLEGCEIYTSCEPCPMCLGAIYWAHLDRIYYANDRKDAAKIGFDDEF 115 >gi|154759286|ref|NP_001094076.1| tRNA-specific adenosine deaminase-like protein 3 [Mus musculus] gi|81892416|sp|Q6PAT0|ADAT3_MOUSE RecName: Full=tRNA-specific adenosine deaminase-like protein 3; AltName: Full=tRNA-specific adenosine-34 deaminase subunit ADAT3 gi|148699580|gb|EDL31527.1| secretory carrier membrane protein 4, isoform CRA_d [Mus musculus] Length = 349 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 9/86 (10%) Query: 64 RILSQEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--Y 117 R L ++ LP V DLYVT EPC MCA A+ ARI+R++YGA +P G GT F + Sbjct: 266 RKLDEDSLPYVCTGYDLYVTREPCVMCAMALVHARIQRVFYGAPSPDGA---LGTLFRVH 322 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQD 143 +H +++ GI E + RQ+ D Sbjct: 323 ARPDLNHRFQVFRGILEDQCRQLDPD 348 >gi|260593324|ref|ZP_05858782.1| guanine deaminase [Prevotella veroralis F0319] gi|260534736|gb|EEX17353.1| guanine deaminase [Prevotella veroralis F0319] Length = 155 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 41/92 (44%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA+ +II+ N D TAHAE+ AIR C L L ++Y + EPC Sbjct: 24 PFGAIIARKGEIIAEGSNGVTIYNDPTAHAEVTAIRKACEKLGTFDLTGCEIYTSCEPCP 83 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC AI A + ++YY I F Sbjct: 84 MCLGAIYWAHLDKIYYANDRKDAADIGFDDDF 115 >gi|237708779|ref|ZP_04539260.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 9_1_42FAA] gi|265755955|ref|ZP_06090422.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_1_33FAA] gi|229457205|gb|EEO62926.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 9_1_42FAA] gi|263234033|gb|EEZ19634.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_1_33FAA] Length = 155 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 41/77 (53%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV + +II+ NR D TAHAE+ AIR L L ++Y + EPC Sbjct: 24 PFGAVIAKDGEIIATGVNRVTSQCDPTAHAEVSAIRAAATKLGTFNLSGCEIYTSCEPCP 83 Query: 85 MCAAAISLARIRRLYYG 101 MC AI AR+ ++YY Sbjct: 84 MCLGAIYWARLDKMYYA 100 >gi|268680105|ref|YP_003304536.1| cytosine deaminase [Sulfurospirillum deleyianum DSM 6946] gi|268618136|gb|ACZ12501.1| Cytosine deaminase [Sulfurospirillum deleyianum DSM 6946] Length = 146 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A+EEAQ IP+G+V V++ KI+ R N+ + HAE+ + R L Sbjct: 5 FLEAAIEEAQKGLDEGGIPIGSVLVIDGKIVGRGHNQRVQKGSAILHAEMDCLENAGR-L 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 S LY TL PC MC+ AI L I +L G Sbjct: 64 SAADYRNATLYSTLSPCDMCSGAILLYGIPKLVIG 98 >gi|209885117|ref|YP_002288974.1| CMP/dCMP deaminase, zinc-binding [Oligotropha carboxidovorans OM5] gi|209873313|gb|ACI93109.1| CMP/dCMP deaminase, zinc-binding [Oligotropha carboxidovorans OM5] Length = 227 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 2/98 (2%) Query: 8 MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ A++ + A + ++ P GAV V + ++++ +GN D +AHAE+ AIR+ C+ Sbjct: 78 MALAIQTMRQAGIVDKTGGPFGAVVVRDGEVLAASGNSVLRDNDPSAHAEVNAIRIACKK 137 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + L L+ + E C MC A ARI ++YY A+ Sbjct: 138 IGAPNLRGATLFTSCECCPMCYATAYWARIDKIYYAAA 175 >gi|107101945|ref|ZP_01365863.1| hypothetical protein PaerPA_01002992 [Pseudomonas aeruginosa PACS2] gi|254235497|ref|ZP_04928820.1| hypothetical protein PACG_01415 [Pseudomonas aeruginosa C3719] gi|254240930|ref|ZP_04934252.1| hypothetical protein PA2G_01610 [Pseudomonas aeruginosa 2192] gi|126167428|gb|EAZ52939.1| hypothetical protein PACG_01415 [Pseudomonas aeruginosa C3719] gi|126194308|gb|EAZ58371.1| hypothetical protein PA2G_01610 [Pseudomonas aeruginosa 2192] Length = 151 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 2/118 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +FM A+ A+ P GAV V + ++++R N+ E D +AHAE+ AIR + Sbjct: 4 EIFMREAIALARANVEAGGRPFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQASQ 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLA 120 L L +Y + PC MC AA+ L I+ ++ SN G G+ T + +A Sbjct: 64 ALGSPRLDGCVIYASGHPCPMCLAAMHLCGIQAAWFAYSNEDGEAFGLSTATLYAEMA 121 >gi|298483515|ref|ZP_07001691.1| guanine deaminase [Bacteroides sp. D22] gi|298270272|gb|EFI11857.1| guanine deaminase [Bacteroides sp. D22] Length = 156 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 1/96 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+E ++ + P GAV A + +I++ NR D TAHAE+ AIR Sbjct: 6 LMRKAIELSKENVVNGGGPFGAVIATKDGEIVATGVNRVTASCDPTAHAEVSAIRAAAAK 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 L L ++Y + EPC MC AI AR+ ++YYG Sbjct: 66 LGTFDLSGYEIYTSCEPCPMCLGAIYWARLDKMYYG 101 >gi|218891523|ref|YP_002440390.1| putative deaminase [Pseudomonas aeruginosa LESB58] gi|218771749|emb|CAW27523.1| probable deaminase [Pseudomonas aeruginosa LESB58] Length = 151 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 2/118 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +FM A+ A+ P GAV V + ++++R N+ E D +AHAE+ AIR + Sbjct: 4 EIFMREAIALARANVEAGGRPFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQASQ 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLA 120 L L +Y + PC MC AA+ L I+ ++ SN G G+ T + +A Sbjct: 64 ALGSPRLDGCVIYASGHPCPMCLAAMHLCGIQAAWFAYSNEDGEPFGLSTATLYAEMA 121 >gi|27379891|ref|NP_771420.1| cytosine deaminase [Bradyrhizobium japonicum USDA 110] gi|27353044|dbj|BAC50045.1| bll4780 [Bradyrhizobium japonicum USDA 110] Length = 150 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 4/97 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA+ + + +P+GAV +N+II+R N + +V H E+ +R I Sbjct: 10 FMLEAIREAEASIAQGGLPIGAVLTRDNQIIARGHNNRVQENNVILHGEMSCLREAGAIT 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + + +Y TL PC+MCA A++L +++ + G S Sbjct: 70 FHDTI----MYTTLSPCSMCAGALALFKVKLVVIGES 102 >gi|116050443|ref|YP_790738.1| putative deaminase [Pseudomonas aeruginosa UCBPP-PA14] gi|115585664|gb|ABJ11679.1| putative deaminase [Pseudomonas aeruginosa UCBPP-PA14] Length = 151 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 2/98 (2%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + ++++R N+ E D +AHAE+ AIR + L L +Y + PC Sbjct: 24 PFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQASQALGSPHLDGCVIYASGHPCP 83 Query: 85 MCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLA 120 MC AA+ L I+ ++ SN G G+ T + +A Sbjct: 84 MCLAAMHLCGIQAAWFAYSNEDGEAFGLSTATLYAEMA 121 >gi|330957624|gb|EGH57884.1| cytosine deaminase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 145 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 1/97 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EA+ IP+G+V V + KII R NR + T H E+ A+ R Sbjct: 2 DAFMQAAIDEARLGLDEGGIPIGSVIVHDGKIIGRGHNRRVQEGSPTRHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + LY TL PC MC+ AI L IR + G Sbjct: 62 -QPASVYRDAVLYTTLSPCAMCSGAILLYGIRTVIVG 97 >gi|160876335|ref|YP_001555651.1| cytosine deaminase [Shewanella baltica OS195] gi|160861857|gb|ABX50391.1| Cytosine deaminase [Shewanella baltica OS195] gi|315268524|gb|ADT95377.1| Cytosine deaminase [Shewanella baltica OS678] Length = 145 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F++ A+EEA+ + IP+G+V V++ KI+ R N+ + HAE+ + R Sbjct: 4 FLAAAIEEAKQGLVEGGIPIGSVLVIDGKIVGRGHNKRVQKGSSVLHAEMDCLENAGRFS 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + E LY TL PC MC+ A+ L I ++ G Sbjct: 64 AAE-YQRATLYSTLSPCDMCSGAVLLYGIPKVIVG 97 >gi|91085973|ref|XP_971753.1| PREDICTED: similar to tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2, putative [Tribolium castaneum] Length = 160 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 9/145 (6%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A + A A E+PVG + V NN I+ N + K+ T HAEI I Sbjct: 1 MERAFQHAYEALAAQEVPVGCIFVHNNTEIAFGRNTVNQTKNATRHAEINCIEQVTDYCK 60 Query: 68 Q------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + V ++VT+EPC MC A+ +++ + +G N + GG T F Sbjct: 61 TNNFNLIDFFKGVTVFVTVEPCIMCINALFDLQVQTIVFGCRNDRFGG---RTVFDVAGV 117 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFK 146 H I G + ++++F+K Sbjct: 118 VHPKTIIKGGFRADEAMNLLKEFYK 142 >gi|300718994|ref|YP_003743797.1| Cytidine/deoxycytidylate deaminase [Erwinia billingiae Eb661] gi|299064830|emb|CAX61950.1| Cytidine/deoxycytidylate deaminase [Erwinia billingiae Eb661] Length = 157 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 43/76 (56%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P V V N +I++ + N+ + D TAHAEILAIR C+ L E L + ++Y+ PC Sbjct: 21 PFATVIVRNGEIVAESANKAAQSHDPTAHAEILAIREACKKLQTENLSDCEIYILASPCP 80 Query: 85 MCAAAISLARIRRLYY 100 MC ++ +++ Y Sbjct: 81 MCLGSLYYCSPKQVIY 96 >gi|17232126|ref|NP_488674.1| hypothetical protein alr4634 [Nostoc sp. PCC 7120] gi|17133771|dbj|BAB76333.1| alr4634 [Nostoc sp. PCC 7120] Length = 140 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 4/97 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA+ + + P GAV V +N++++ A N D +AHAEI IR L Sbjct: 6 FMRLAIAEAK----KGDAPYGAVIVKDNQVVAFAHNTVARDNDPSAHAEINVIRRLTAQL 61 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L +Y T EPC MCAAA + I + YGAS Sbjct: 62 QSFSLAGYSIYTTGEPCPMCAAACVWSGIAEIIYGAS 98 >gi|206578758|ref|YP_002237260.1| cytidine/deoxycytidylate deaminase family protein [Klebsiella pneumoniae 342] gi|206567816|gb|ACI09592.1| cytidine/deoxycytidylate deaminase family protein [Klebsiella pneumoniae 342] Length = 152 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 11/117 (9%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V +++I++ A N D TAHAE+ A+R L E+L E +Y + +PC Sbjct: 25 PFGAVLVRHDEIVAEAVNTFHLNGDPTAHAELNAVRDLAARLGSEVLRECVIYASGQPCP 84 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 MC +A+ L +R +++ SN ++G F T IY + + SRQ + Sbjct: 85 MCLSALYLTGVREVFFANSN------QDGEPFQLSTTA-----IYQQLQQPLSRQTL 130 >gi|15597695|ref|NP_251189.1| deaminase [Pseudomonas aeruginosa PAO1] gi|296389082|ref|ZP_06878557.1| putative deaminase [Pseudomonas aeruginosa PAb1] gi|9948552|gb|AAG05887.1|AE004677_4 probable deaminase [Pseudomonas aeruginosa PAO1] Length = 151 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 2/98 (2%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + ++++R N+ E D +AHAE+ AIR + L L +Y + PC Sbjct: 24 PFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQASQALGSPRLDGCVIYASGHPCP 83 Query: 85 MCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLA 120 MC AA+ L I+ ++ SN G G+ T + +A Sbjct: 84 MCLAAMHLCGIQAAWFAYSNEDGEAFGLSTATLYAEMA 121 >gi|49075844|gb|AAT49501.1| PA2499 [synthetic construct] Length = 152 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 2/98 (2%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + ++++R N+ E D +AHAE+ AIR + L L +Y + PC Sbjct: 24 PFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQASQALGSPRLDGCVIYASGHPCP 83 Query: 85 MCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLA 120 MC AA+ L I+ ++ SN G G+ T + +A Sbjct: 84 MCLAAMHLCGIQAAWFAYSNEDGEAFGLSTATLYAEMA 121 >gi|313107393|ref|ZP_07793584.1| putative deaminase [Pseudomonas aeruginosa 39016] gi|310880086|gb|EFQ38680.1| putative deaminase [Pseudomonas aeruginosa 39016] Length = 151 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 2/98 (2%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + ++++R N+ E D +AHAE+ AIR + L L +Y + PC Sbjct: 24 PFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQASQALGSPRLDGCVIYASGHPCP 83 Query: 85 MCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLA 120 MC AA+ L I+ ++ SN G G+ T + +A Sbjct: 84 MCLAAMHLCGIQAAWFAYSNEDGEPFGLSTATLYAEMA 121 >gi|319652245|ref|ZP_08006363.1| hypothetical protein HMPREF1013_02976 [Bacillus sp. 2_A_57_CT2] gi|317396068|gb|EFV76788.1| hypothetical protein HMPREF1013_02976 [Bacillus sp. 2_A_57_CT2] Length = 150 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 45/94 (47%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E A N P GAV V II+ N + DV+ HAE+LAIR Sbjct: 4 FMKRAIELAINNVKDGGQPFGAVLVKEQDIIAEGVNELHKKHDVSGHAELLAIRRAQEQF 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L +Y + EPC +C A+ A I ++YY Sbjct: 64 QTNDLAGFTMYASGEPCPLCLTAMYFAGIDKVYY 97 >gi|24372975|ref|NP_717017.1| cytosine deaminase [Shewanella oneidensis MR-1] gi|24347125|gb|AAN54462.1|AE015583_7 cytosine deaminase [Shewanella oneidensis MR-1] Length = 145 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A++EA+ IP+G+V V++ KII+R N+ + HAE+ + R+ Sbjct: 4 FLQAAIDEAKQGLAEGGIPIGSVLVIDGKIIARGHNKRVQQGSAVLHAEMDCLENAGRLT 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + + LY TL PC MC+ AI L I ++ G Sbjct: 64 AAD-YQKATLYSTLSPCDMCSGAILLYGIPKVVVG 97 >gi|298715154|emb|CBJ27842.1| conserved unknown protein [Ectocarpus siliculosus] Length = 364 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 42/69 (60%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134 DLYVT EPC MCA A+ +R+RR+ YG + + G + + T +TL + +H+ ++ G+ Sbjct: 286 DLYVTREPCLMCAMALVHSRVRRVIYGVRDTERGCLGSVTMLHTLTSLNHNYRVFEGVCA 345 Query: 135 QRSRQIIQD 143 RQ + D Sbjct: 346 DECRQSLSD 354 >gi|213409075|ref|XP_002175308.1| tRNA-specific adenosine deaminase subunit tad2 [Schizosaccharomyces japonicus yFS275] gi|212003355|gb|EEB09015.1| tRNA-specific adenosine deaminase subunit tad2 [Schizosaccharomyces japonicus yFS275] Length = 365 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 4/95 (4%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 HAE++A+ + I EV LYVT+EPC MCAAA+ I+ +Y+G N + GG Sbjct: 242 HAELVAVEDILKRYPPSIFEEVTLYVTVEPCLMCAAALKQLHIKEVYFGCGNDRFGGC-- 299 Query: 113 GTQFYTLATCHHSP--EIYPGISEQRSRQIIQDFF 145 G+ F P +YPG+ + +++ F+ Sbjct: 300 GSVFSINKDPSVDPPYPVYPGLYRAEAIMLMRQFY 334 >gi|226506666|ref|NP_001147339.1| cytidine/deoxycytidylate deaminase family protein [Zea mays] gi|195610278|gb|ACG26969.1| cytidine/deoxycytidylate deaminase family protein [Zea mays] Length = 184 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/67 (40%), Positives = 41/67 (61%) Query: 38 SRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 S + N R+ D +AHAE+ AIR C+ L + L ++Y + EPC MC I LA+I++ Sbjct: 65 SSSHNSVRKDADPSAHAEVTAIRQACKKLGKTSLSGCEIYTSCEPCPMCLGLIRLAKIKK 124 Query: 98 LYYGASN 104 + YGA + Sbjct: 125 VVYGAKS 131 >gi|327542899|gb|EGF29355.1| cytosine deaminase [Rhodopirellula baltica WH47] Length = 149 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ AL+EA+ + IP+G+V V++N+I+SR NR + HAE+ + R+ Sbjct: 4 FLQAALDEARLGLNEHGIPIGSVLVIDNEIVSRGHNRRIQNGSSILHAEMDCLERAGRLT 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + LY TL PC MC+ A L +I R+ G Sbjct: 64 AND-YSRSTLYSTLSPCDMCSGAALLYKIPRIIVG 97 >gi|212693618|ref|ZP_03301746.1| hypothetical protein BACDOR_03136 [Bacteroides dorei DSM 17855] gi|237724217|ref|ZP_04554698.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. D4] gi|212663871|gb|EEB24445.1| hypothetical protein BACDOR_03136 [Bacteroides dorei DSM 17855] gi|229437405|gb|EEO47482.1| cytidine/deoxycytidylate deaminase [Bacteroides dorei 5_1_36/D4] Length = 187 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 41/77 (53%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV + +II+ NR D TAHAE+ AIR L L ++Y + EPC Sbjct: 56 PFGAVIAKDGEIIATGVNRVTSQCDPTAHAEVSAIRAAATKLGTFNLSGCEIYTSCEPCP 115 Query: 85 MCAAAISLARIRRLYYG 101 MC AI AR+ ++YY Sbjct: 116 MCLGAIYWARLDKMYYA 132 >gi|92118729|ref|YP_578458.1| CMP/dCMP deaminase, zinc-binding [Nitrobacter hamburgensis X14] gi|91801623|gb|ABE63998.1| CMP/dCMP deaminase, zinc-binding protein [Nitrobacter hamburgensis X14] Length = 211 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 2/98 (2%) Query: 8 MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 MS A+ + A + ++ P GAV V + ++++ +GN D +AHAE+ AIR+ C+ Sbjct: 62 MSLAILTMRQAGVVDKTGGPFGAVVVRDGEVLAASGNSVLRDNDPSAHAEVNAIRIACKK 121 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + L L+ + E C MC A ARI ++YY A+ Sbjct: 122 IGAPNLRGATLFTSCECCPMCYATAYWARISKIYYAAA 159 >gi|104782115|ref|YP_608613.1| cytosine deaminase [Pseudomonas entomophila L48] gi|95111102|emb|CAK15822.1| Cytosine deaminase [Pseudomonas entomophila L48] Length = 141 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 1/94 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A++EA+ IP+G+V V + KII R NR + H E+ A+ R Sbjct: 1 MQAAIDEARKGLEEGGIPIGSVLVHDGKIIGRGHNRRVQKGSAILHGEMDALENAGR-QP 59 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + LY TL PC MC+ AI L I+R+ G Sbjct: 60 ASVYQQATLYTTLSPCAMCSGAILLYGIKRVVIG 93 >gi|220907233|ref|YP_002482544.1| CMP/dCMP deaminase [Cyanothece sp. PCC 7425] gi|219863844|gb|ACL44183.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7425] Length = 144 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 12/144 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A+ EA+ IP+G+V V N +II R N+ + + HAEI ++ R Sbjct: 2 DQFMQAAIAEARTGLQEGGIPIGSVLVKNGEIIGRGHNQRVQQGNPIIHAEIDCLQQAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 I + + LY TL PC +CA A+ I+++ G S G E F H Sbjct: 62 IGRYQ---DTTLYSTLMPCYLCAGAVVQFGIKKVIAGESYTFPGARE----FME----SH 110 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 E+ + Q +Q++QDF + + Sbjct: 111 GVEVID-LDLQECKQLMQDFIQAK 133 >gi|119509403|ref|ZP_01628552.1| cytosine deaminase [Nodularia spumigena CCY9414] gi|119466017|gb|EAW46905.1| cytosine deaminase [Nodularia spumigena CCY9414] Length = 143 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 3/97 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ +A+ IP+G+V V + KII R N+ + D HAEI +R R+ Sbjct: 4 FMEAAIAQAKQGRKEGGIPIGSVLVKDGKIIGRGHNKRVQDNDPVTHAEIDCLRNAGRVG 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 S LY TL PC +CA A+ I+++ G S Sbjct: 64 SYR---GTTLYSTLMPCYLCAGAVVQFGIKKVIAGES 97 >gi|312115805|ref|YP_004013401.1| CMP/dCMP deaminase zinc-binding protein [Rhodomicrobium vannielii ATCC 17100] gi|311220934|gb|ADP72302.1| CMP/dCMP deaminase zinc-binding protein [Rhodomicrobium vannielii ATCC 17100] Length = 212 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 6/127 (4%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71 +E ++ A + P GA+ L+ +I++ AGNR D + HAEI+AI + + + L Sbjct: 16 IELSREATREGDYPFGALIALDGEIVAEAGNRAMRDADFSRHAEIIAIAAALKTVGRGGL 75 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT------LATCHHS 125 LY T+EPC MC+ I A + R+ Y ++P GG+ T + L + Sbjct: 76 ARATLYSTVEPCAMCSFCIREAWVGRVAYALASPAMGGVSKWTILHDADLGRQLPIFGPA 135 Query: 126 PEIYPGI 132 PE+ G+ Sbjct: 136 PEVVSGL 142 >gi|145347025|ref|XP_001417980.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578208|gb|ABO96273.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 173 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 16/112 (14%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI-------- 59 M AL +A+ A E+P G + +I++ N ++ T HAE A+ Sbjct: 1 MRVALAQARLALDEWEVPCGCALARDGEIVAVGRNATNRTRNGTRHAEFEAVDALLDAHG 60 Query: 60 --RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 R CR +V LYVT EPC MCA A+S +R + YG +N K GG Sbjct: 61 GDRAACR------FEDVTLYVTCEPCVMCAGAMSALGVREVVYGCANDKFGG 106 >gi|256376193|ref|YP_003099853.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827] gi|255920496|gb|ACU36007.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827] Length = 158 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 3/97 (3%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA+ +++++ NR D TAHAE++AIR CR L L L + EPC Sbjct: 27 PFGALVARGDEVVATGANRVTADLDPTAHAEVVAIRAACRALGDFSLAGCVLVSSCEPCP 86 Query: 85 MCAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTL 119 +C +A AR+ R+ Y A + G ++G F+ L Sbjct: 87 LCLSAALWARVERVVYAADRHDAAAVGFDDGV-FHDL 122 >gi|270159339|ref|ZP_06187995.1| cytosine deaminase [Legionella longbeachae D-4968] gi|289165841|ref|YP_003455979.1| Cytosine deaminase (Cytosine aminohydrolase) [Legionella longbeachae NSW150] gi|269987678|gb|EEZ93933.1| cytosine deaminase [Legionella longbeachae D-4968] gi|288859014|emb|CBJ12942.1| Cytosine deaminase (Cytosine aminohydrolase) [Legionella longbeachae NSW150] Length = 149 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 9/93 (9%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI----RMG 62 ++ A+EEA+ + + IP+GAV V ++II R N+ + H E+ AI R Sbjct: 8 YLDTAIEEARRSVAQGGIPIGAVLVYKDRIIGRGHNQRVQKGSTILHGEMDAIENAGRQK 67 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 ++ Q I LY TL PC MC+ AI L +I Sbjct: 68 AKVYEQSI-----LYTTLSPCAMCSGAILLYKI 95 >gi|294933962|ref|XP_002780922.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239891069|gb|EER12717.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 294 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/102 (38%), Positives = 50/102 (49%), Gaps = 1/102 (0%) Query: 2 KKGNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 K FM+ A A LR+ P GA V + IS A N KD T HAE+ AIR Sbjct: 17 KVDECFMTAACMSATAGVILRHGGPFGAAVVRDGMPISCAHNTVLYNKDPTCHAEVNAIR 76 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 R L + L + LY + EPC MC AI + ++ +Y GA Sbjct: 77 HAVRHLGRSELSDCVLYTSCEPCPMCWGAIMASGLKVMYVGA 118 >gi|29345731|ref|NP_809234.1| cytidine/deoxycytidylate deaminase [Bacteroides thetaiotaomicron VPI-5482] gi|253567719|ref|ZP_04845130.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 1_1_6] gi|298384629|ref|ZP_06994189.1| guanine deaminase [Bacteroides sp. 1_1_14] gi|29337624|gb|AAO75428.1| cytidine/deoxycytidylate deaminase [Bacteroides thetaiotaomicron VPI-5482] gi|251841792|gb|EES69872.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 1_1_6] gi|298262908|gb|EFI05772.1| guanine deaminase [Bacteroides sp. 1_1_14] Length = 156 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 3/99 (3%) Query: 25 PVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P GAV A +II+ NR D TAHAE+ AIR L L ++Y + EPC Sbjct: 24 PFGAVIATKEGEIIATGVNRVTSSCDPTAHAEVSAIRAAAAKLGTFNLSGYEIYTSCEPC 83 Query: 84 TMCAAAISLARIRRLYYG--ASNPKGGGIENGTQFYTLA 120 MC AI AR+ ++YYG ++ K G ++ + LA Sbjct: 84 PMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYDELA 122 >gi|238881956|gb|EEQ45594.1| conserved hypothetical protein [Candida albicans WO-1] Length = 270 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 4/109 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ +L A L NE PV + V ++KIIS N + T HAE +A++ Sbjct: 1 MAISLFVGYKALLNNETPVSCIVVDSKSDKIISIGYNYTNHSLNGTQHAEFIALQRFGEQ 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 S ++ LYVT+EPC MCA+ + I+++ +G N + GG NGT Sbjct: 61 KSSIDYNDLILYVTVEPCIMCASYLRQLGIKKVIFGCGNDRFGG--NGT 107 >gi|153001599|ref|YP_001367280.1| cytosine deaminase [Shewanella baltica OS185] gi|217972471|ref|YP_002357222.1| Cytosine deaminase [Shewanella baltica OS223] gi|151366217|gb|ABS09217.1| Cytosine deaminase [Shewanella baltica OS185] gi|217497606|gb|ACK45799.1| Cytosine deaminase [Shewanella baltica OS223] Length = 145 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 26/147 (17%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F++ A+EEA+ IP+G+V V++ KI+ R N+ + HAE+ + R Sbjct: 4 FLAAAIEEAKQGLAEGGIPIGSVLVIDGKIVGRGHNKRVQKGSSVLHAEMDCLENAGRFS 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + E LY TL PC MC+ A+ L I ++ G EN T P Sbjct: 64 AAE-YQRATLYSTLSPCDMCSGAVLLYGIPKVIVG---------EN--------TTFQGP 105 Query: 127 EIYPG--------ISEQRSRQIIQDFF 145 E Y + +Q++QDF Sbjct: 106 EAYVKSRGVDVTVVDNAECKQLMQDFI 132 >gi|332529894|ref|ZP_08405846.1| cmp/dcmp deaminase zinc-binding protein [Hylemonella gracilis ATCC 19624] gi|332040688|gb|EGI77062.1| cmp/dcmp deaminase zinc-binding protein [Hylemonella gracilis ATCC 19624] Length = 170 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 1/101 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ + ++ A+ + N R P GAV V ++++ A E D T HAE A+R Sbjct: 15 ERDSSYLRQAITWSANGRARGNRPFGAVIVSEQGEVLAEAWCNTSETGDCTGHAETNAVR 74 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + ++ ++ L LY + EPC MCA AI + I R+ YG Sbjct: 75 LVSPLVDRDTLARATLYSSAEPCVMCAGAIFWSNIGRVVYG 115 >gi|237715975|ref|ZP_04546456.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. D1] gi|237722247|ref|ZP_04552728.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 2_2_4] gi|262407589|ref|ZP_06084137.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294645725|ref|ZP_06723411.1| guanine deaminase [Bacteroides ovatus SD CC 2a] gi|294808352|ref|ZP_06767107.1| guanine deaminase [Bacteroides xylanisolvens SD CC 1b] gi|229443622|gb|EEO49413.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. D1] gi|229448057|gb|EEO53848.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 2_2_4] gi|262354397|gb|EEZ03489.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292638931|gb|EFF57263.1| guanine deaminase [Bacteroides ovatus SD CC 2a] gi|294444428|gb|EFG13140.1| guanine deaminase [Bacteroides xylanisolvens SD CC 1b] gi|295085135|emb|CBK66658.1| Cytosine/adenosine deaminases [Bacteroides xylanisolvens XB1A] Length = 156 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%) Query: 25 PVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P GAV A + +I++ NR D TAHAE+ AIR L L ++Y + EPC Sbjct: 24 PFGAVIATKDGEIVATGVNRVTASCDPTAHAEVSAIRAAAAKLGTFDLSGYEIYTSCEPC 83 Query: 84 TMCAAAISLARIRRLYYG 101 MC AI AR+ ++YYG Sbjct: 84 PMCLGAIYWARLDKMYYG 101 >gi|16331502|ref|NP_442230.1| hypothetical protein sll0051 [Synechocystis sp. PCC 6803] gi|1001158|dbj|BAA10300.1| sll0051 [Synechocystis sp. PCC 6803] Length = 159 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 2/98 (2%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A+ ++A + N+ P G V V + ++I AGN + D +AHAE+ AIR C+ Sbjct: 9 YMRQAIAIMRDAGVVNKTGGPFGVVIVKDGEVIGAAGNSVIQDNDPSAHAEVNAIREACK 68 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 + L +Y + E C MC A ARI ++YY A Sbjct: 69 TVGSWNLEGAVMYSSCECCPMCYATSYWARIDKIYYAA 106 >gi|113971133|ref|YP_734926.1| cytosine deaminase [Shewanella sp. MR-4] gi|113885817|gb|ABI39869.1| Cytosine deaminase [Shewanella sp. MR-4] Length = 145 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A++EA+ IP+G+V V++ KI++R N+ + HAE+ + R+ Sbjct: 4 FLQAAIDEAKQGLAEGGIPIGSVLVIDGKIVARGHNKRVQQGSAVLHAEMDCLENAGRLT 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + + LY TL PC MC+ AI L I ++ G Sbjct: 64 AAD-YQKATLYSTLSPCDMCSGAILLYGIPKVVVG 97 >gi|88809683|ref|ZP_01125190.1| hypothetical protein WH7805_00725 [Synechococcus sp. WH 7805] gi|88786433|gb|EAR17593.1| hypothetical protein WH7805_00725 [Synechococcus sp. WH 7805] Length = 159 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 43/79 (54%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV + K++S +GN D +AHAE+ AIR C+ L L +Y + E C Sbjct: 29 PFGAVIAKDGKVVSASGNSVVRDLDPSAHAEVNAIRAACKALGTWDLTGCVMYTSCECCP 88 Query: 85 MCAAAISLARIRRLYYGAS 103 MC A A IR+++Y A+ Sbjct: 89 MCYATAYWAGIRKVFYAAA 107 >gi|148508325|gb|ABQ76108.1| cytosine/adenosine deaminases [uncultured haloarchaeon] Length = 153 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 13/150 (8%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M+ A+E A+ AA R + P G+V V ++ I+ R NR D+ H E+ Sbjct: 8 RSHEAHMTEAIELAREAADRGDDPFGSVLVRDDTIVMRESNREHTESDIRRHPELHLAYR 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C+ S + + +Y + EPC MCA ++ A + Y G + QF + Sbjct: 68 ACQAYSPQERAMMAMYTSTEPCPMCAGGMTTAHFGSVIYSV------GTDELAQFIGSQS 121 Query: 122 CHHSPEIYPGISE-------QRSRQIIQDF 144 + +I G++E R+I Q+F Sbjct: 122 PVRAEDILSGVTEVHGPVLNDDGRRIHQEF 151 >gi|114048372|ref|YP_738922.1| cytosine deaminase [Shewanella sp. MR-7] gi|113889814|gb|ABI43865.1| Cytosine deaminase [Shewanella sp. MR-7] Length = 145 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A++EA+ IP+G+V V++ KI++R N+ + HAE+ + R+ Sbjct: 4 FLQAAIDEAKQGLAEGGIPIGSVLVIDGKIVARGHNKRVQQGSAVLHAEMDCLENAGRLT 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + + LY TL PC MC+ AI L I ++ G Sbjct: 64 AAD-YQKATLYSTLSPCDMCSGAILLYGIPKVVVG 97 >gi|282880633|ref|ZP_06289339.1| guanine deaminase [Prevotella timonensis CRIS 5C-B1] gi|281305528|gb|EFA97582.1| guanine deaminase [Prevotella timonensis CRIS 5C-B1] Length = 156 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 1/99 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ ++ + L P GAV II+ A N D TAHAE+ AIR + L Sbjct: 8 MRRAIALSEESVLSGGGPFGAVIAKGGNIIAEASNTVTIDHDPTAHAEVNAIRKATQKLG 67 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 L D+Y + EPC MC AI A + R++Y A+N K Sbjct: 68 TFDLTGCDIYTSCEPCPMCLGAIYWAHLDRIFY-ANNRK 105 >gi|307154712|ref|YP_003890096.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822] gi|306984940|gb|ADN16821.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822] Length = 147 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 3/97 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA+ IP+G+V V + +I+ R N+ + D HAEI +R RI Sbjct: 8 FMQAAIAEAKQGLQEGGIPIGSVLVKDGQIVGRGHNKRVQDNDPVTHAEIDCLRNAGRIG 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + LY TL PC +CA A+ I+R+ G S Sbjct: 68 Q---YGDSILYSTLMPCYLCAGAVVQFGIKRVIAGES 101 >gi|331703065|ref|YP_004399752.1| cytosine deaminase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801620|emb|CBW53773.1| Cytosine deaminase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 147 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 1/109 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59 M N + + +++ A N+IPV + NN I++ + N + K+++ HAEI AI Sbjct: 1 MNDFNNILDLMIYQSKKAIKHNDIPVCCCIIDNNNNILTISINTRYKNKNISQHAEINAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 L+ L E L TLEPC MC +AI +I +YY + K G Sbjct: 61 NKLINKLNTFNLSEYKLITTLEPCMMCYSAIKQVKINTIYYLVDSYKFG 109 >gi|268574528|ref|XP_002642242.1| Hypothetical protein CBG18226 [Caenorhabditis briggsae] gi|187025244|emb|CAP35711.1| hypothetical protein CBG_18226 [Caenorhabditis briggsae AF16] Length = 168 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 1/80 (1%) Query: 25 PVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P GAV V N ++++ N KD T HAE+ AIR C+ L L LY + PC Sbjct: 36 PFGAVIVDNKGNVVAKGHNMVLVTKDPTMHAEMTAIRNACKTLGTFDLSGHTLYTSCYPC 95 Query: 84 TMCAAAISLARIRRLYYGAS 103 MC A AR +YYGA+ Sbjct: 96 PMCMGASLWARFDAIYYGAT 115 >gi|148555831|ref|YP_001263413.1| CMP/dCMP deaminase, zinc-binding [Sphingomonas wittichii RW1] gi|148501021|gb|ABQ69275.1| CMP/dCMP deaminase, zinc-binding [Sphingomonas wittichii RW1] Length = 163 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 50/101 (49%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A+E A++ + P GAV V + I++ N D TAHAE+ AIR R L Sbjct: 10 FLRAAIELARDNVAQGGRPFGAVVVKDGAIVAVGVNEILATNDPTAHAELGAIRAAGRRL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 L +Y + PC MC AA+ +A I + Y SN G Sbjct: 70 GSPDLSGCTVYASGHPCPMCMAAMRMAGIGAVAYAYSNEDG 110 >gi|56965577|ref|YP_177311.1| guanine deaminase [Bacillus clausii KSM-K16] gi|56911823|dbj|BAD66350.1| guanine deaminase [Bacillus clausii KSM-K16] Length = 156 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 1/87 (1%) Query: 25 PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P A+ V N II + N D TAHAE++AIR C ++ L LY + EPC Sbjct: 24 PFAAIIVDPNGAIIGQGTNSVTNDNDPTAHAEVVAIRDACNTINDFQLEGCTLYTSCEPC 83 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGI 110 MC AI AR + +Y+ A+ + Sbjct: 84 PMCLGAIYWARPKAVYFAATQEDAAAV 110 >gi|288925498|ref|ZP_06419431.1| guanine deaminase [Prevotella buccae D17] gi|315606630|ref|ZP_07881641.1| guanine deaminase [Prevotella buccae ATCC 33574] gi|288337714|gb|EFC76067.1| guanine deaminase [Prevotella buccae D17] gi|315251640|gb|EFU31618.1| guanine deaminase [Prevotella buccae ATCC 33574] Length = 155 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 42/92 (45%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV N +I++ A N D TAHAE+ AIR L L ++Y + EPC Sbjct: 24 PFGAVIARNGEIVAEASNSVTIDHDPTAHAEVNAIRKATSKLQNFDLEGCEIYTSCEPCP 83 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 MC AI A + ++YY I F Sbjct: 84 MCLGAIYWAHLDKIYYANDRKDAAKIGFDDDF 115 >gi|254458782|ref|ZP_05072206.1| cytosine deaminase [Campylobacterales bacterium GD 1] gi|207084548|gb|EDZ61836.1| cytosine deaminase [Campylobacterales bacterium GD 1] Length = 145 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 ++F+ A++EA+ IP+G+V V++ KI+ R NR + HAE+ + R Sbjct: 2 DIFLEEAIKEAKKGLSEGGIPIGSVLVIDGKIVGRGHNRRVQNSSAILHAEMDCLENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + + +Y TL PC MC+ AI L I+R+ G Sbjct: 62 LKAID-YKRATIYSTLSPCDMCSGAILLYGIKRVIIG 97 >gi|183597629|ref|ZP_02959122.1| hypothetical protein PROSTU_00918 [Providencia stuartii ATCC 25827] gi|188022897|gb|EDU60937.1| hypothetical protein PROSTU_00918 [Providencia stuartii ATCC 25827] Length = 157 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 6/127 (4%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V +N+++ N D T HAE+ IR C L E LY + EPC Sbjct: 29 PFGAVLVKDNQVVMTGENHIHTESDPTYHAELGLIRQYCSEHKIMNLSEYTLYTSCEPCC 88 Query: 85 MCAAAISLARIRRLYYGASNPK-----GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 MC+ A+ +++ R+ Y S+ + G I G+ A PE+ G+ ++++ Sbjct: 89 MCSGAMVWSQLGRMVYSLSHDELAEIAGFNIMLGSD-EIFAKSPFKPEVTHGVLKEKAML 147 Query: 140 IIQDFFK 146 I +F+ Sbjct: 148 IYTQYFQ 154 >gi|126175278|ref|YP_001051427.1| cytosine deaminase [Shewanella baltica OS155] gi|125998483|gb|ABN62558.1| Cytosine deaminase [Shewanella baltica OS155] Length = 145 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F++ A+EEA+ IP+G+V V++ KI+ R N+ + HAE+ + R Sbjct: 4 FLAAAIEEAKQGLAEGGIPIGSVLVIDGKIVGRGHNKRVQKGSSVLHAEMDCLENAGRFS 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + E LY TL PC MC+ A+ L I ++ G Sbjct: 64 AAE-YQRATLYSTLSPCDMCSGAVLLYGIPKVIVG 97 >gi|111145470|gb|ABH06955.1| cytidine/deoxycytidylate deaminase family protein [Desulfovibrio vulgaris] Length = 88 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 40/74 (54%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 L TLEPC MCA AI AR+ + YGA +PK G + + + + +H P G+ + Sbjct: 13 LVXTLEPCLMCAGAIVHARVEGVVYGAEDPKAGAVTSCLEAFEQPFLNHRPWHMGGVRRR 72 Query: 136 RSRQIIQDFFKERR 149 I++DFF RR Sbjct: 73 ACTAILKDFFNGRR 86 >gi|304410115|ref|ZP_07391734.1| Cytosine deaminase [Shewanella baltica OS183] gi|307302173|ref|ZP_07581931.1| Cytosine deaminase [Shewanella baltica BA175] gi|304351524|gb|EFM15923.1| Cytosine deaminase [Shewanella baltica OS183] gi|306914211|gb|EFN44632.1| Cytosine deaminase [Shewanella baltica BA175] Length = 145 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F++ A+EEA+ IP+G+V V++ KI+ R N+ + HAE+ + R Sbjct: 4 FLAAAIEEAKQGLAEGGIPIGSVLVIDGKIVGRGHNKRVQKGSSVLHAEMDCLENAGRFS 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + E LY TL PC MC+ A+ L I ++ G Sbjct: 64 AAE-YQRATLYSTLSPCDMCSGAVLLYGIPKVIVG 97 >gi|163852551|ref|YP_001640594.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1] gi|163664156|gb|ABY31523.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1] Length = 153 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 4/92 (4%) Query: 12 LEEAQNAALRNEI----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 L EA AL N P GAV V + ++I+RA NR D + HAE++AIR + L Sbjct: 8 LREATELALANVAEGGRPYGAVIVRDGEVIARAANRIHATNDPSDHAEMVAIRAASQQLG 67 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 + L + +Y + PC MC AA+ LA +++ Y Sbjct: 68 RPKLDDCIVYASGRPCPMCHAAMRLAGVKQGY 99 >gi|32475570|ref|NP_868564.1| cytosine deaminase [Rhodopirellula baltica SH 1] gi|32446112|emb|CAD75941.1| cytosine deaminase [Rhodopirellula baltica SH 1] Length = 187 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ AL EA+ + IP+G+V V++N+I+SR NR + HAE+ + R+ Sbjct: 42 FLQAALNEARLGLNEHGIPIGSVLVIDNEIVSRGHNRRIQNGSSILHAEMDCLERAGRLT 101 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + LY TL PC MC+ A L +I R+ G Sbjct: 102 AND-YSRSTLYSTLSPCDMCSGAALLYKIPRIIVG 135 >gi|189219256|ref|YP_001939897.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4] gi|189186114|gb|ACD83299.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4] Length = 146 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F A EEA+ IP+GA ++++ R NR +L V H E+ + R Sbjct: 4 FWHIAFEEAKIGFEEGGIPIGACLAYKDRVLGRGRNRRVQLGSVIKHGELDCLE-NARRY 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS----NPKGGGIENGTQFYTL 119 + +I E LY TL PC MC+ AI L I+++ G + P+ I+NG + L Sbjct: 63 TAKIYREAILYTTLSPCWMCSGAILLYGIKKVVIGENRNFKGPEEILIQNGVEIIHL 119 >gi|126323601|ref|XP_001371730.1| PREDICTED: similar to hCG22695, [Monodelphis domestica] Length = 538 Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134 +LY+T EPC MCA A+ +RI+R++YG ++P G + + +T +H E++ GI E Sbjct: 470 ELYITSEPCVMCAMALVHSRIQRVFYGIASPD-GALGTKYKIHTRQDLNHRFEVFRGILE 528 Query: 135 QRSRQIIQD 143 R +I+D Sbjct: 529 DRCYSLIKD 537 >gi|239820133|ref|YP_002947318.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110] gi|239804986|gb|ACS22052.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110] Length = 158 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 47/92 (51%) Query: 16 QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75 +N R P GAV V K+++RA N L D TAHAE+ A+RM + L Sbjct: 21 RNVRERRTWPFGAVLVREGKVLARAVNEVDALCDPTAHAEMQAVRMAAKAQGGTDLSGSV 80 Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 +Y + PC MC A+ LA ++ + Y SN G Sbjct: 81 VYASGYPCPMCLTAMFLAGVKEVCYAYSNEDG 112 >gi|17555996|ref|NP_499418.1| hypothetical protein Y48A6B.7 [Caenorhabditis elegans] gi|3881060|emb|CAA19531.1| C. elegans protein Y48A6B.7, confirmed by transcript evidence [Caenorhabditis elegans] Length = 168 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 1/80 (1%) Query: 25 PVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P GAV V +N K++++ N KD T HAE+ AI+ C+ L L LY + PC Sbjct: 36 PFGAVVVDSNGKVVAKGHNMVLVTKDPTMHAEMTAIKNACKALGTFDLSGHILYTSCYPC 95 Query: 84 TMCAAAISLARIRRLYYGAS 103 MC AR +YYGA+ Sbjct: 96 PMCMGGCLWARFDAIYYGAT 115 >gi|294953511|ref|XP_002787800.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239902824|gb|EER19596.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 319 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 3/114 (2%) Query: 7 FMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A+ A L+ P GA N+ ++ A N +D T HAE+ AIRM + Sbjct: 37 FMEAAVLSATTGVKLKEGGPFGACITRNDVVVCCAHNTFFSDRDPTCHAEMNAIRMAMHL 96 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L + L +Y + EPC MC AI + IR LY G + +NG ++ + Sbjct: 97 LKTDDLAGCVIYSSFEPCPMCWGAILASGIRLLYVGLD--RHTAAKNGVEYLSF 148 >gi|307544360|ref|YP_003896839.1| cytosine deaminase [Halomonas elongata DSM 2581] gi|307216384|emb|CBV41654.1| cytosine deaminase [Halomonas elongata DSM 2581] Length = 152 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ IP+G+V V I+ NR +L H E+ A+ R Sbjct: 4 FMQAALDEARAGLDEGGIPIGSVLVHRGVILGGGRNRRVQLGSTVLHGEMDALENAGR-Q 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 S +I E LY TL PC MC AI L I R+ G Sbjct: 63 SADIYRESTLYTTLSPCAMCTGAILLYGIPRVVIG 97 >gi|296273637|ref|YP_003656268.1| cytosine deaminase [Arcobacter nitrofigilis DSM 7299] gi|296097811|gb|ADG93761.1| Cytosine deaminase [Arcobacter nitrofigilis DSM 7299] Length = 145 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A++EA+ IP+G+V V+++KI+ R NR + HAE+ + RI Sbjct: 4 FLQAAIDEAKKGIDEGGIPIGSVLVIDDKIVGRGHNRRVQNGSAVLHAEMDCLENAGRIK 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + LY TL PC MC+ A+ L I + G Sbjct: 64 ASD-YKRATLYSTLSPCDMCSGAVLLYGIPNVVIG 97 >gi|149174160|ref|ZP_01852788.1| Cytosine deaminase [Planctomyces maris DSM 8797] gi|148847140|gb|EDL61475.1| Cytosine deaminase [Planctomyces maris DSM 8797] Length = 145 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 9/99 (9%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI----RMG 62 FM A+EEA+ +P+G+V V KII R N+ ++ H E+ A+ R Sbjct: 4 FMQAAIEEAEKGRDAGGVPIGSVLVYEGKIIGRGHNQRQQKGSAILHGEMSALEDAGRQP 63 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 R+ + +Y TL PC MC+ AI L +I R+ G Sbjct: 64 ARVYRNSV-----IYTTLSPCPMCSGAIRLYQIPRVVIG 97 >gi|146292307|ref|YP_001182731.1| cytosine deaminase [Shewanella putrefaciens CN-32] gi|145563997|gb|ABP74932.1| Cytosine deaminase [Shewanella putrefaciens CN-32] Length = 145 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A++EA+ IP+G+V V++ KI++R N+ + HAE+ + R L Sbjct: 4 FLQAAIDEAKQGLAEGGIPIGSVLVIDGKIVARGHNKRVQQGSAVLHAEMDCLENAGR-L 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 S + LY TL PC MC+ AI L I ++ G Sbjct: 63 SAADYQKGTLYSTLSPCDMCSGAILLYGIPKVVVG 97 >gi|152971270|ref|YP_001336379.1| putative adenosine deaminase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|330013669|ref|ZP_08307752.1| cytidine and deoxycytidylate deaminase zinc-binding region [Klebsiella sp. MS 92-3] gi|150956119|gb|ABR78149.1| putative adenosine deaminase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|328533404|gb|EGF60142.1| cytidine and deoxycytidylate deaminase zinc-binding region [Klebsiella sp. MS 92-3] Length = 152 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 47/83 (56%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V N++I++ + N D TAHAE+ A+R L +L E +Y + +PC Sbjct: 25 PFGAVLVRNDEIVAESVNTFHLSGDPTAHAELNAVRDLAARLGSAVLRECVIYASGQPCP 84 Query: 85 MCAAAISLARIRRLYYGASNPKG 107 MC +A+ L +R +++ SN G Sbjct: 85 MCLSALYLTGVREVFFANSNQDG 107 >gi|206562263|ref|YP_002233026.1| guanine deaminase [Burkholderia cenocepacia J2315] gi|198038303|emb|CAR54258.1| guanine deaminase [Burkholderia cenocepacia J2315] Length = 155 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 42/76 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P V V + +I++ + N + D TAHAEILA+R CR L E L + ++Y+ PC Sbjct: 21 PFATVIVRDGEIVAESPNLVAQTSDPTAHAEILAVRDACRTLGTEHLTDCEIYILASPCP 80 Query: 85 MCAAAISLARIRRLYY 100 MC ++ +R+ Y Sbjct: 81 MCLGSLYYCSPKRVIY 96 >gi|289208092|ref|YP_003460158.1| CMP/dCMP deaminase zinc-binding protein [Thioalkalivibrio sp. K90mix] gi|288943723|gb|ADC71422.1| CMP/dCMP deaminase zinc-binding protein [Thioalkalivibrio sp. K90mix] Length = 146 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 1/97 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N F+ AL+EA+ IP+G+V +I+ R NR + HAE+ A+ R Sbjct: 2 NPFLEAALDEARTGWDEGGIPIGSVIEHGGRIVGRGHNRRVQSGSAILHAEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + E LY TL PC MC+ AI L I R+ G Sbjct: 62 -QPASVYRECTLYTTLSPCAMCSGAIVLYGIPRVVVG 97 >gi|326203162|ref|ZP_08193028.1| CMP/dCMP deaminase zinc-binding [Clostridium papyrosolvens DSM 2782] gi|325986808|gb|EGD47638.1| CMP/dCMP deaminase zinc-binding [Clostridium papyrosolvens DSM 2782] Length = 137 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 37/91 (40%), Positives = 47/91 (51%), Gaps = 2/91 (2%) Query: 27 GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE-VDLYVTLEPCTM 85 AV I+S+ R+ D TAHAEI AIR C+ L ++LP+ LY T EPC + Sbjct: 16 AAVIDAEGNIVSKGKTTVRDDHDPTAHAEINAIRSACKRLKVDVLPKGYWLYSTFEPCPL 75 Query: 86 CAAAISLARIRRLYYGASNPKGGGIENGTQF 116 CAAAI A + Y A+N G E F Sbjct: 76 CAAAIIWAGFEGVVY-ANNADHRGKEINWSF 105 >gi|325528019|gb|EGD05243.1| cytidine/deoxycytidylate deaminase [Burkholderia sp. TJI49] Length = 155 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 43/76 (56%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P V V + +I++ + N + +D TAHAEILA+R CR L E L + ++Y+ PC Sbjct: 21 PFATVIVRDGEIVAESPNLVAQTRDPTAHAEILAVRDACRRLGTEHLTDCEIYILASPCP 80 Query: 85 MCAAAISLARIRRLYY 100 MC ++ +R+ Y Sbjct: 81 MCLGSLYYCSPKRVVY 96 >gi|298293557|ref|YP_003695496.1| CMP/dCMP deaminase zinc-binding protein [Starkeya novella DSM 506] gi|296930068|gb|ADH90877.1| CMP/dCMP deaminase zinc-binding protein [Starkeya novella DSM 506] Length = 158 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 39/77 (50%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P G V V + I+ N D T+H E+ AIR R L L +LY T EPC Sbjct: 26 PFGCVIVKDGVIVGEGVNNVVNNHDATSHGEVEAIRDAGRRLKSWDLSGCELYTTCEPCE 85 Query: 85 MCAAAISLARIRRLYYG 101 MC A++ A+I R+YY Sbjct: 86 MCVASMFWAKISRMYYA 102 >gi|238895863|ref|YP_002920599.1| putative adenosine deaminase [Klebsiella pneumoniae NTUH-K2044] gi|238548181|dbj|BAH64532.1| putative adenosine deaminase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 154 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 47/83 (56%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V N++I++ + N D TAHAE+ A+R L +L E +Y + +PC Sbjct: 27 PFGAVLVRNDEIVAESVNTFHLSGDPTAHAELNAVRDLAARLGSAVLRECVIYASGQPCP 86 Query: 85 MCAAAISLARIRRLYYGASNPKG 107 MC +A+ L +R +++ SN G Sbjct: 87 MCLSALYLTGVREVFFANSNQDG 109 >gi|39970877|ref|XP_366829.1| hypothetical protein MGG_02905 [Magnaporthe oryzae 70-15] gi|149210385|ref|XP_001522567.1| hypothetical protein MGCH7_ch7g670 [Magnaporthe oryzae 70-15] gi|86196625|gb|EAQ71263.1| hypothetical protein MGCH7_ch7g670 [Magnaporthe oryzae 70-15] gi|145017270|gb|EDK01633.1| hypothetical protein MGG_02905 [Magnaporthe oryzae 70-15] Length = 593 Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 44/147 (29%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM----- 61 F+ AL+ A+ A NE PVG V V ++I+R N ++ T HAE +A+ Sbjct: 212 FIEEALDMARLALKTNETPVGCVLVYRGRVIARGMNATNITRNGTRHAEYMALSSLFGTK 271 Query: 62 ---------GCRI------------------------------LSQEILPEVDLYVTLEP 82 C+ ++ I+ E LYVT+EP Sbjct: 272 PDAPPPSHPSCKHEVDDPGEWDAVDVTKSYLYPYGQKLHPSPHVTASIVQESTLYVTVEP 331 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGG 109 C MCA+ + +I+++Y+GA N K GG Sbjct: 332 CVMCASLLKQLKIKKVYFGAVNDKFGG 358 >gi|94312654|ref|YP_585863.1| CMP/dCMP deaminase [Cupriavidus metallidurans CH34] gi|93356506|gb|ABF10594.1| CMP/dCMP deaminase [Cupriavidus metallidurans CH34] Length = 156 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 52/101 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 ++ A+E A+ + P GAV V + ++I+ N+ D TAHAE+ AIR + L Sbjct: 9 YLGEAIELARTNLEQGGRPFGAVIVKDGEVIATGVNQILSTNDPTAHAELTAIRAASQKL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 L +Y + PC MC AA+ +A ++ + Y SN G Sbjct: 69 GSPSLDGCAVYASGHPCPMCMAAMRMAGVKEVTYAYSNDDG 109 >gi|19076024|ref|NP_588524.1| cytosine deaminase (predicted) [Schizosaccharomyces pombe 972h-] gi|74626752|sp|O59834|FCYS_SCHPO RecName: Full=Probable cytosine deaminase; AltName: Full=Cytosine aminohydrolase gi|3136043|emb|CAA19074.1| cytosine deaminase (predicted) [Schizosaccharomyces pombe] Length = 162 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 4/104 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 +K ++ A++ +Q A + P G + V N+ +I AGNR + DVT HAE A+ Sbjct: 8 EKDLAYLREAIKVSQQARDEGQHPFGCIIVDENDNVIMSAGNRVPD-GDVTQHAETRAV- 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 G ++ L + LY + EPC MC+ AI + IRR+ +G SN Sbjct: 66 -GLITKTRRDLEKCTLYTSTEPCAMCSGAIFWSGIRRMIFGLSN 108 >gi|91215299|ref|ZP_01252271.1| hypothetical protein P700755_13417 [Psychroflexus torquis ATCC 700755] gi|91186904|gb|EAS73275.1| hypothetical protein P700755_13417 [Psychroflexus torquis ATCC 700755] Length = 149 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 2/95 (2%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 GAV V II+ N+ D T HAE+ ++ CR L + L LY + EPC Sbjct: 28 AFGAVIVKEGHIIAEGHNQVGSKTDCTQHAELAMVQEACRKLKSKSLKGCVLYTSCEPCL 87 Query: 85 MCAAAISLARIRRLYYGAS--NPKGGGIENGTQFY 117 MC A A + +++YGAS + K G FY Sbjct: 88 MCLGATRWADLDQVFYGASADDAKEAGYIYSDLFY 122 >gi|269859573|ref|XP_002649511.1| tRNA-specific adenosine deaminase [Enterocytozoon bieneusi H348] gi|220067062|gb|EED44530.1| tRNA-specific adenosine deaminase [Enterocytozoon bieneusi H348] Length = 159 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 7/83 (8%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR----MGC 63 + A A A ++NE+PVG +N I NR + KD AH E LAI + Sbjct: 5 FNVAFNAANQARIKNELPVGCAVFINGVIFCTEHNRTNQYKDPLAHCEFLAINYLKSVDL 64 Query: 64 RILSQEILPEVDLYVTLEPCTMC 86 RIL+ + + Y+TLEPC MC Sbjct: 65 RILN---IHSCEFYITLEPCVMC 84 >gi|8778532|gb|AAF79540.1|AC023673_28 F21D18.9 [Arabidopsis thaliana] Length = 331 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 15/94 (15%) Query: 28 AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ------------EILPEVD 75 V + + K+I+ NR E ++ T HAE+ AI +++ Q E + Sbjct: 183 CVFLEDGKVIASGRNRTNETRNATRHAEMEAID---QLVGQWQKDGLSPSQVAEKFSKCV 239 Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 LYVT EPC MCA+A+S I+ +YYG N K GG Sbjct: 240 LYVTCEPCIMCASALSFLGIKEVYYGCPNDKFGG 273 >gi|254562307|ref|YP_003069402.1| Guanine deaminase [Methylobacterium extorquens DM4] gi|254269585|emb|CAX25555.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) [Methylobacterium extorquens DM4] Length = 153 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 4/92 (4%) Query: 12 LEEAQNAALRNEI----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 L EA AL N P GAV V + ++++RA NR D + HAE++AIR + L Sbjct: 8 LREATEIALANVAEGGRPYGAVIVRDGEVVARAANRIHATNDPSDHAEMVAIRAASQQLG 67 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 + L + +Y + PC MC AA+ LA +++ Y Sbjct: 68 RPKLDDCIVYASGRPCPMCHAAMRLAGVKQGY 99 >gi|91773185|ref|YP_565877.1| CMP/dCMP deaminase, zinc-binding [Methanococcoides burtonii DSM 6242] gi|91712200|gb|ABE52127.1| Cytosine deaminase [Methanococcoides burtonii DSM 6242] Length = 143 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 3/105 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA++ IP+G+V V ++ II + N + D AHAEI +R R+ Sbjct: 4 FMQVAIDEARSGLNSGGIPIGSVLVRDDLIIGKGHNLRVQQDDPMAHAEISCLRDAGRVG 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 S + LY TL PC +CA A+ I+++ G S G E Sbjct: 64 SYR---DSILYSTLMPCYLCAGAVVQFGIKKVIVGESRTFSGARE 105 >gi|71652572|ref|XP_814939.1| deaminase [Trypanosoma cruzi strain CL Brener] gi|70879957|gb|EAN93088.1| deaminase, putative [Trypanosoma cruzi] Length = 202 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 11/125 (8%) Query: 30 AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE------ILPEVDLYVTLEPC 83 A L + I +R N + AHAE +A+ R +++ L LYV +EPC Sbjct: 63 ASLGSLIAARGRNATNKEHHALAHAEFVAVEALLRDAAEKGRKPPASLAGYVLYVVVEPC 122 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ---I 140 MCAA + RI+++Y+G NP+ GG NGT A S Y R+ + + Sbjct: 123 IMCAAMLLYNRIKKVYFGCGNPRFGG--NGTVLAVHAAKSTSAPAYESCGGHRAEEAIAL 180 Query: 141 IQDFF 145 +Q+F+ Sbjct: 181 LQEFY 185 >gi|255693462|ref|ZP_05417137.1| guanine deaminase [Bacteroides finegoldii DSM 17565] gi|260620746|gb|EEX43617.1| guanine deaminase [Bacteroides finegoldii DSM 17565] Length = 156 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Query: 25 PVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P GAV A +I++ NR D TAHAE+ AIR L L ++Y + EPC Sbjct: 24 PFGAVIATKEGEIVATGVNRVTASCDPTAHAEVSAIRAAAAKLGTFNLSGYEIYTSCEPC 83 Query: 84 TMCAAAISLARIRRLYYG 101 MC AI AR+ ++YYG Sbjct: 84 PMCLGAIYWARLDKMYYG 101 >gi|300856157|ref|YP_003781141.1| putative purine deaminase, zinc-binding domain [Clostridium ljungdahlii DSM 13528] gi|300436272|gb|ADK16039.1| putative purine deaminase, zinc-binding domain [Clostridium ljungdahlii DSM 13528] Length = 163 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 1/98 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++ A E A+N+ P GA+ V + I+ N D T HAE +R + Sbjct: 9 YLRRANEIAKNSREHGNTPFGALLVDKDGNILLEQENIEISTGDCTGHAEASLMRRASQK 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 S+E L E LY T EPC MC+ AI +R + YG + Sbjct: 69 YSKEFLAECTLYTTFEPCVMCSGAIYWGNVRTVVYGLT 106 >gi|240139885|ref|YP_002964362.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) [Methylobacterium extorquens AM1] gi|240009859|gb|ACS41085.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) [Methylobacterium extorquens AM1] Length = 153 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 4/92 (4%) Query: 12 LEEAQNAALRNEI----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 L EA AL N P GAV V + ++++RA NR D + HAE++AIR + L Sbjct: 8 LREATELALANVAEGGRPYGAVIVRDGEVVARAANRIHATNDPSDHAEMVAIRAASQQLG 67 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 + L + +Y + PC MC AA+ LA +++ Y Sbjct: 68 RPKLDDCIVYASGRPCPMCHAAMRLAGVKQGY 99 >gi|239816940|ref|YP_002945850.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110] gi|239803517|gb|ACS20584.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110] Length = 176 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 2/97 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR-MGCR 64 ++ A+ + A R P G+V V ++++ A N N E D TAHAE+ A+R + R Sbjct: 25 YLRKAIVWSHAARRRGNRPFGSVIVSAAGEVLAEAANSNTESGDCTAHAEMNALRALAGR 84 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 L++E L +Y + EPC MCA AI + I R+ +G Sbjct: 85 GLTREELAGATIYASGEPCVMCAGAIFWSNIGRVVFG 121 >gi|153808000|ref|ZP_01960668.1| hypothetical protein BACCAC_02286 [Bacteroides caccae ATCC 43185] gi|149129609|gb|EDM20823.1| hypothetical protein BACCAC_02286 [Bacteroides caccae ATCC 43185] Length = 156 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Query: 25 PVGAVAVLNNKIISRAG-NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P GAV +I G NR D TAHAE+ AIR L L ++Y + EPC Sbjct: 24 PFGAVIATKEGVIVATGVNRVTTSCDPTAHAEVSAIRAAAAKLGTFDLSGYEIYTSCEPC 83 Query: 84 TMCAAAISLARIRRLYYG 101 MC AI AR+ ++YYG Sbjct: 84 PMCLGAIYWARLDKMYYG 101 >gi|222480528|ref|YP_002566765.1| CMP/dCMP deaminase zinc-binding [Halorubrum lacusprofundi ATCC 49239] gi|222453430|gb|ACM57695.1| CMP/dCMP deaminase zinc-binding [Halorubrum lacusprofundi ATCC 49239] Length = 174 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 48/98 (48%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 ++ A+E A+ A P GA+ VL+ +I++ A N D+ AH E+ R R L Sbjct: 29 YVDRAIELAEEAVEMGNTPFGALLVLDGEIVAEAHNETLTEDDLAAHPELALARWAGREL 88 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 + +Y + EPC MCA I A I R+ +G + Sbjct: 89 DVDERARCTMYASTEPCPMCATGIHYAGIGRVVFGVAG 126 >gi|323136503|ref|ZP_08071585.1| CMP/dCMP deaminase, zinc-binding [Methylocystis sp. ATCC 49242] gi|322398577|gb|EFY01097.1| CMP/dCMP deaminase, zinc-binding [Methylocystis sp. ATCC 49242] Length = 189 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 4/97 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+EA R + P GAV ++++ N + D TAH E++AIR + Sbjct: 49 YMRIALDEAA----RGDFPFGAVIEKGGRVLATGHNSGKSTNDPTAHGEMVAIRNFIKSH 104 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L +Y T EPC MC AI RR+ + AS Sbjct: 105 PSAELNGATIYTTGEPCPMCMGAIIWCGFRRVVFAAS 141 >gi|92114624|ref|YP_574552.1| cytosine deaminase [Chromohalobacter salexigens DSM 3043] gi|91797714|gb|ABE59853.1| Cytosine deaminase [Chromohalobacter salexigens DSM 3043] Length = 149 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 1/97 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A+EEA+ +P+G+V V +II R N+ ++ H E+ A+ R Sbjct: 2 DPFMQAAIEEARKGYEAGGVPIGSVLVHRGEIIGRGHNQRQQRGSAILHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 L + E LY TL PC MC+ AI L I + G Sbjct: 62 -LPAHVYREAVLYTTLSPCPMCSGAIVLYGIPEVVIG 97 >gi|284052639|ref|ZP_06382849.1| CMP/dCMP deaminase zinc-binding protein [Arthrospira platensis str. Paraca] Length = 75 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 36/72 (50%) Query: 78 VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 VTLEPC MCA AI ARI L YG +PK G I +H + GI E Sbjct: 1 VTLEPCPMCAGAILQARIGLLVYGVDDPKTGSIRTVCNLPDSPASYHRLPVLGGILESSC 60 Query: 138 RQIIQDFFKERR 149 RQ +Q +F + R Sbjct: 61 RQQLQSWFAQHR 72 >gi|70733728|ref|YP_257368.1| guanine deaminase [Pseudomonas fluorescens Pf-5] gi|68348027|gb|AAY95633.1| guanine deaminase, putative [Pseudomonas fluorescens Pf-5] Length = 153 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 7/83 (8%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD---LYVTLE 81 P GA+ V N ++++ A N +D TAHAE+LAIR R L P +D +Y + + Sbjct: 25 PFGALLVRNGRVLAEAVNEIHLSQDPTAHAEMLAIRAASRQLG----PRLDDCVIYASGQ 80 Query: 82 PCTMCAAAISLARIRRLYYGASN 104 PC MC AA+ L + R + ASN Sbjct: 81 PCPMCLAAMYLCGVSRAVFAASN 103 >gi|78063661|ref|YP_373569.1| cytidine/deoxycytidylate deaminase [Burkholderia sp. 383] gi|77971546|gb|ABB12925.1| Cytidine/deoxycytidylate deaminase [Burkholderia sp. 383] Length = 155 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 42/76 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P V V + +I++ + N + D TAHAEILA+R CR L E L + ++Y+ PC Sbjct: 21 PFATVIVRDGEIVAESPNLVAQTSDPTAHAEILAVRDACRKLGTEHLTDCEIYILASPCP 80 Query: 85 MCAAAISLARIRRLYY 100 MC ++ +R+ Y Sbjct: 81 MCLGSLYYCSPKRVVY 96 >gi|170751807|ref|YP_001758067.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM 2831] gi|170658329|gb|ACB27384.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM 2831] Length = 152 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 44/79 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + ++ RA N D +AHAE++A+R R+L + L + +Y + PC Sbjct: 25 PYGAVIVRDGAVLVRAANTVHATNDPSAHAEMVALREASRLLGRRDLGDCVMYASGRPCP 84 Query: 85 MCAAAISLARIRRLYYGAS 103 MC AA+ LA + Y+ S Sbjct: 85 MCHAAMRLAGFKEGYFAFS 103 >gi|160883688|ref|ZP_02064691.1| hypothetical protein BACOVA_01660 [Bacteroides ovatus ATCC 8483] gi|260170907|ref|ZP_05757319.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. D2] gi|293369917|ref|ZP_06616489.1| guanine deaminase [Bacteroides ovatus SD CMC 3f] gi|299146282|ref|ZP_07039350.1| guanine deaminase [Bacteroides sp. 3_1_23] gi|315919237|ref|ZP_07915477.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156110773|gb|EDO12518.1| hypothetical protein BACOVA_01660 [Bacteroides ovatus ATCC 8483] gi|292634999|gb|EFF53519.1| guanine deaminase [Bacteroides ovatus SD CMC 3f] gi|298516773|gb|EFI40654.1| guanine deaminase [Bacteroides sp. 3_1_23] gi|313693112|gb|EFS29947.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 156 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Query: 25 PVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P GAV A +I++ NR D TAHAE+ AIR L L ++Y + EPC Sbjct: 24 PFGAVIATKEGEIVATGVNRVTASCDPTAHAEVSAIRAAAAKLGTFNLSGYEIYTSCEPC 83 Query: 84 TMCAAAISLARIRRLYYG 101 MC AI AR+ ++YYG Sbjct: 84 PMCLGAIYWARLDKMYYG 101 >gi|114775692|ref|ZP_01451260.1| cytosine deaminase [Mariprofundus ferrooxydans PV-1] gi|114553803|gb|EAU56184.1| cytosine deaminase [Mariprofundus ferrooxydans PV-1] Length = 145 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A++EA+ IP+G+V V++ +I+ R NR + HAE+ + R+ Sbjct: 4 FLRAAIDEARQGMAEGGIPIGSVLVIDGEIVGRGHNRRVQQGSAVLHAEMDCLEQAGRLT 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + LY TL PC MC+ A+ L I R+ G Sbjct: 64 AAD-YRRATLYSTLSPCDMCSGAVLLYGIPRVVVG 97 >gi|209548305|ref|YP_002280222.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534061|gb|ACI53996.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 157 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 56/110 (50%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ F+ A+ +++A + + P G+V V + ++I RA N D+T HAE+ I+ Sbjct: 1 MENHEPFLREAIALSKSAMDQGDEPFGSVLVKDGEVILRAENSVFTGHDMTNHAEMNLIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 + L + LY + EPC MC+ AI + I R+ + S + G I Sbjct: 61 SAAKHYDTGFLADCTLYTSTEPCAMCSGAIYWSGIGRMVFACSEARLGEI 110 >gi|312215394|emb|CBX95346.1| similar to cytosine deaminase [Leptosphaeria maculans] Length = 152 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 11/149 (7%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M ++ ALEEA+ + +P+GA V KI+ R N + T HAEI A+ Sbjct: 1 MSSADIGFQAALEEARTGSSEGGLPIGACLVSAQGKILGRGHNMRIQRGSATLHAEISAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R L + +Y TL PC MC A L +++R+ G + GG ++ Sbjct: 61 ERAGR-LPASAYQDATMYTTLSPCDMCTGACILYKVKRVVIGENQTFVGGEDHLKSKGIE 119 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148 PE + ++ DF KE+ Sbjct: 120 VVVLQDPEC---------QNLMADFIKEK 139 >gi|289755883|ref|ZP_06515261.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis EAS054] gi|289696470|gb|EFD63899.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis EAS054] Length = 111 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 41/74 (55%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 L VT+EPCTMCA A+ LAR+ RL +GA PK G + + +H PE+ G+ + Sbjct: 36 LAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLAR 95 Query: 136 RSRQIIQDFFKERR 149 ++ FF +R Sbjct: 96 ECAAPLEAFFARQR 109 >gi|86143346|ref|ZP_01061748.1| guanine deaminase [Leeuwenhoekiella blandensis MED217] gi|85830251|gb|EAQ48711.1| guanine deaminase [Leeuwenhoekiella blandensis MED217] Length = 149 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 2/95 (2%) Query: 29 VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88 V V + II+ NR E D T HAE+ I+ C+ L + L LY + EPC MC Sbjct: 32 VIVKDGSIIAEGHNRVGENTDCTQHAELAMIQEACKKLGSKSLKGCILYTSCEPCLMCLG 91 Query: 89 AISLARIRRLYYGAS--NPKGGGIENGTQFYTLAT 121 A A + +YYGAS + K G FY T Sbjct: 92 ASRWAALDAVYYGASAADAKEAGYVYSQLFYNSHT 126 >gi|255724014|ref|XP_002546936.1| hypothetical protein CTRG_01242 [Candida tropicalis MYA-3404] gi|240134827|gb|EER34381.1| hypothetical protein CTRG_01242 [Candida tropicalis MYA-3404] Length = 279 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 13/126 (10%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M+ +L A L NE PV + V ++IIS N + T HAE +A++ R Sbjct: 11 YMAISLFVGYKALLNNETPVSCIVVNSKTDEIISIGYNYTNHSLNGTQHAEFIALQ---R 67 Query: 65 ILSQEILPEVDL--YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 S E + DL YVT+EPC MCA+ + I ++ +G N + GG NG T+ Sbjct: 68 FESDESINYSDLILYVTVEPCIMCASYLRQLGIGKVIFGCGNDRFGG--NG----TVLPV 121 Query: 123 HHSPEI 128 H P + Sbjct: 122 HKDPSL 127 >gi|117921416|ref|YP_870608.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. ANA-3] gi|117613748|gb|ABK49202.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. ANA-3] Length = 145 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A++EA+ IP+G+V V++ +I++R N+ + HAE+ + R+ Sbjct: 4 FLQAAIDEAKQGLAEGGIPIGSVLVIDGEIVARGHNKRVQQGSAVLHAEMDCLENAGRLT 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + + LY TL PC MC+ AI L I ++ G Sbjct: 64 AAD-YQKATLYSTLSPCDMCSGAILLYGIPKVVVG 97 >gi|188582573|ref|YP_001926018.1| CMP/dCMP deaminase zinc-binding [Methylobacterium populi BJ001] gi|179346071|gb|ACB81483.1| CMP/dCMP deaminase zinc-binding [Methylobacterium populi BJ001] Length = 153 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 4/92 (4%) Query: 12 LEEAQNAALRNEI----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 L EA AL N P GAV V ++++RA NR D + HAE++AIR + L Sbjct: 8 LREATELALANVAEGGRPYGAVIVREGEVVARAANRIHATNDPSDHAEMVAIRAASQRLG 67 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 + L + +Y + PC MC AA+ LA +++ Y Sbjct: 68 RPKLDDCIVYASGRPCPMCHAAMRLAGVKQSY 99 >gi|327540848|gb|EGF27409.1| guanine deaminase [Rhodopirellula baltica WH47] Length = 155 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 8/75 (10%) Query: 29 VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88 +AV +N+++SR D TAHAE++AI + L L + L T EPC MC A Sbjct: 36 IAVAHNQVVSRC--------DPTAHAEVVAIGKAAKKLGDPDLSGLWLVSTGEPCPMCLA 87 Query: 89 AISLARIRRLYYGAS 103 AI LA I R+ YGAS Sbjct: 88 AIGLAGIERVAYGAS 102 >gi|229822451|ref|YP_002883977.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333] gi|229568364|gb|ACQ82215.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333] Length = 176 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 5/94 (5%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC--RILSQEILPEVDLYV 78 R E+P+GAV +I RA + + L HA++LA+ R + P + L V Sbjct: 30 RGEMPIGAVVFAGEDVIGRAFTQEQSLGRRIVHADLLAMIAADEHRGFDRSAGP-LTLAV 88 Query: 79 TLEPCTMC-AAAISLARIRRLYYGASNPKGGGIE 111 LEPC MC AAI+L + R++YG ++P GG+E Sbjct: 89 NLEPCLMCLGAAITLG-VERVFYGLASPNDGGVE 121 >gi|160872356|ref|ZP_02062488.1| cytosine deaminase (Cytosine aminohydrolase) [Rickettsiella grylli] gi|159121155|gb|EDP46493.1| cytosine deaminase (Cytosine aminohydrolase) [Rickettsiella grylli] Length = 169 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 4/102 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD--VTAHAEILAI 59 KK F+ A +EA IP+G++ V+ NK+ RA RN+ +++ + H E + Sbjct: 6 KKEREFLDLAYQEALLGLKEGGIPIGSILVVENKV--RAKGRNKRIQEHSMIKHGETDCL 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 R + E L LY TL PC+MCA AI L +I R+ G Sbjct: 64 ENTRRKVLPEDLQRATLYTTLSPCSMCAGAILLHKIPRVIVG 105 >gi|282164705|ref|YP_003357090.1| cytosine deaminase [Methanocella paludicola SANAE] gi|282157019|dbj|BAI62107.1| cytosine deaminase [Methanocella paludicola SANAE] Length = 145 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 2/104 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM AL+EA+ IP+G+V V++ I+ R NR + HAE+ + R Sbjct: 2 NEFMRAALDEAKKGLREGGIPIGSVLVVDGVIVGRGHNRRVQQGSTIKHAEMDCLESAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKG 107 L + LY TL PC MC+ A+ L I ++ G + N KG Sbjct: 62 -LRAATYRKSTLYSTLSPCDMCSGAVLLYGIPKVVIGENMNFKG 104 >gi|156040950|ref|XP_001587461.1| hypothetical protein SS1G_11453 [Sclerotinia sclerotiorum 1980] gi|154695837|gb|EDN95575.1| hypothetical protein SS1G_11453 [Sclerotinia sclerotiorum 1980 UF-70] Length = 245 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 60/145 (41%), Gaps = 42/145 (28%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI----- 59 FM AL A A NE PVG V V + K+++R N + T HAE +AI Sbjct: 30 FMGEALAMANLALNTNETPVGCVLVDPVLKKVVARGMNATNRSYNGTRHAEFIAIDELLS 89 Query: 60 ---RMGC--------------------------------RILSQEILPEVDLYVTLEPCT 84 R C R E + +DLYVT+EPC Sbjct: 90 SSLRSDCGSADETREAKRKREENGSEADHGQGGGSEISGRGYGPENMKNLDLYVTIEPCI 149 Query: 85 MCAAAISLARIRRLYYGASNPKGGG 109 MCA+ + IR+++YGA N K GG Sbjct: 150 MCASLLQQFGIRKVWYGAVNDKFGG 174 >gi|70990810|ref|XP_750254.1| cytosine deaminase [Aspergillus fumigatus Af293] gi|119496775|ref|XP_001265161.1| cytosine deaminase, putative [Neosartorya fischeri NRRL 181] gi|66847886|gb|EAL88216.1| cytosine deaminase, putative [Aspergillus fumigatus Af293] gi|119413323|gb|EAW23264.1| cytosine deaminase, putative [Neosartorya fischeri NRRL 181] gi|159130729|gb|EDP55842.1| cytosine deaminase, putative [Aspergillus fumigatus A1163] Length = 148 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 11/139 (7%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 ALEEA+ A +P+GA V + KI+ R N + T HAE+ A+ R L Sbjct: 10 ALEEAKKGAAEGGVPIGAALVSKDGKILGRGHNMRVQKGSATLHAEMSALENSGR-LPAS 68 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 +Y TL PC MC A L +++R+ G + GG E Y L + E+ Sbjct: 69 AYEGATMYTTLSPCDMCTGACILYKVKRVVIGENKNFMGGEE-----YLL---NRGKEVV 120 Query: 130 PGISEQRSRQIIQDFFKER 148 + + +Q+++ F KE+ Sbjct: 121 V-LDNEECKQLMEKFIKEK 138 >gi|75908250|ref|YP_322546.1| cytidine/deoxycytidylate deaminase [Anabaena variabilis ATCC 29413] gi|75701975|gb|ABA21651.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Anabaena variabilis ATCC 29413] Length = 141 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 4/97 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA+ + + P GAV V ++++++ A N D +AHAEI +R L Sbjct: 6 FMRLAIAEAK----KGDAPYGAVIVKDDQVVAFAHNTVGRDNDPSAHAEINVVRRLTAQL 61 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L +Y T EPC MCAAA + I + YGAS Sbjct: 62 QSFSLEGYSIYTTGEPCPMCAAACVWSGIAEIIYGAS 98 >gi|50290647|ref|XP_447756.1| hypothetical protein [Candida glabrata CBS 138] gi|49527067|emb|CAG60703.1| unnamed protein product [Candida glabrata] Length = 259 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 13/125 (10%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILA 58 M K + AL+ A+ A E PV V V ++ +++ N + TAHAE +A Sbjct: 1 MDKYLKHIDSALKLARYALDHGETPVACVFVHEKSDSVVAYGLNDTNDSLSGTAHAEFVA 60 Query: 59 IRM---------GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 +RM + +++ E+ YVT+EPC MCA+A+ I ++ +G N + GG Sbjct: 61 MRMLRDAVQAQGYASVQLKQLFKEIVCYVTVEPCIMCASALKQMGIHKIVFGCGNDRFGG 120 Query: 110 IENGT 114 NGT Sbjct: 121 --NGT 123 >gi|254577709|ref|XP_002494841.1| ZYRO0A10890p [Zygosaccharomyces rouxii] gi|238937730|emb|CAR25908.1| ZYRO0A10890p [Zygosaccharomyces rouxii] Length = 248 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 19/151 (12%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNR-NRELKDVTAHAEILAIRMGCR 64 M AL + A E PV + V ++I++ N NR L V AHAE + I Sbjct: 11 METALRLGRYALDHGETPVACIFVHIPTDQIVAFGMNDTNRSLTGV-AHAEFMGIEQIRE 69 Query: 65 ILS-QEILP---EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY--- 117 +S E++P ++ LYVT+EPC MCA+A+ I ++ +GA N + GG NGT Sbjct: 70 FVSPDELVPFFGDIALYVTVEPCIMCASALKQLGIGKVIFGAGNDRFGG--NGTVLSINQ 127 Query: 118 ---TLATCHHSPEIYPGISEQRSRQIIQDFF 145 TL H S PG+ + + +++ F+ Sbjct: 128 DSCTLGGKHES---IPGVLRREAIMLLRYFY 155 >gi|258593876|emb|CBE70217.1| Cytosine deaminase (Cytosine aminohydrolase) [NC10 bacterium 'Dutch sediment'] Length = 154 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 9/108 (8%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A E+A+ + +P+GAV V N+ +I+ NR + D TAH E+ +R R Sbjct: 11 FIRAAFEQARKSYNEGGLPIGAVMVENSTVIAVGHNRRVQDGDPTAHGEMDCLRQAGR-- 68 Query: 67 SQEILPEVD---LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 P D LY TL PC MC+ + I+R+ G G +E Sbjct: 69 ----RPRYDGITLYTTLSPCMMCSGTVLQFGIKRVVIGEKQNFPGNVE 112 >gi|325964675|ref|YP_004242581.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans Sphe3] gi|323470762|gb|ADX74447.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans Sphe3] Length = 164 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 47/97 (48%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F++ ++ A L + P GA+ V + NR D TAHAE+ AIR CR L Sbjct: 10 FLARSIRLATANVLNSGGPFGAMIVTADGRAFDGVNRVTADNDPTAHAEVTAIRTACREL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L LY + EPC MC A+ AR+ R+ + A Sbjct: 70 GTFDLSGATLYTSCEPCPMCLASALWARVERVVFAAD 106 >gi|170751176|ref|YP_001757436.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM 2831] gi|170657698|gb|ACB26753.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM 2831] Length = 160 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 2/98 (2%) Query: 7 FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM+ A+ ++ +L + G V V + +II+ NR D T H EI AIR C+ Sbjct: 8 FMARAIALSEKTSLVDSAGGVFGCVIVQDGEIIAEGANRVVAENDPTWHGEIEAIRKACK 67 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L LY + EPC MC AA A ++ +YY A Sbjct: 68 AQGSFKLRNATLYTSAEPCPMCMAAAYWAGVKNVYYAA 105 >gi|302529650|ref|ZP_07281992.1| guanine deaminase [Streptomyces sp. AA4] gi|302438545|gb|EFL10361.1| guanine deaminase [Streptomyces sp. AA4] Length = 162 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 42/76 (55%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA+ V + +I++ NR D TAHAE++AIR C+ L L L + EPC Sbjct: 31 PFGALVVKDGEIVATGVNRVTPSLDPTAHAEVVAIRAACQALGTFSLAGCVLVSSCEPCP 90 Query: 85 MCAAAISLARIRRLYY 100 MC A+ AR+ R+ Y Sbjct: 91 MCLASSLWARVDRVLY 106 >gi|319425606|gb|ADV53680.1| Cytosine deaminase [Shewanella putrefaciens 200] Length = 145 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A++EA+ IP+G+V V++ I++R N+ + HAE+ + R L Sbjct: 4 FLQAAIDEAKQGLAEGGIPIGSVLVIDGNIVARGHNKRVQQGSAVLHAEMDCLENAGR-L 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 S + LY TL PC MC+ AI L I ++ G Sbjct: 63 SAADYQKATLYSTLSPCDMCSGAILLYGIPKVVVG 97 >gi|86741404|ref|YP_481804.1| tRNA-adenosine deaminase [Frankia sp. CcI3] gi|86568266|gb|ABD12075.1| tRNA-adenosine deaminase [Frankia sp. CcI3] Length = 196 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 1/126 (0%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRE-LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++ PVGAV + A + +RE D TA+AEILA+R + L L + L TL Sbjct: 63 DDPPVGAVIYGPDGTEIAAAHHDRERTADPTAYAEILALRQAAQALGTWRLTDCTLVTTL 122 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EP TM A AI LARI RL G + G + + +H E+ P + + + Sbjct: 123 EPGTMSAGAIVLARIPRLIIGTWDKYNGAVCSLWDVVRDRRLNHFVEVIPDVLKDECDAL 182 Query: 141 IQDFFK 146 + + Sbjct: 183 LDSYLD 188 >gi|292494136|ref|YP_003533279.1| Cytidine/deoxycytidylate deaminase, zinc-binding region (TBD) [Haloferax volcanii DS2] gi|291369169|gb|ADE01399.1| Cytidine/deoxycytidylate deaminase, zinc-binding region (TBD) [Haloferax volcanii DS2] Length = 153 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 49/101 (48%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M + E A+ AA R + P G+V V ++++I R NR D+ H E+ CR Sbjct: 14 MRESFELARKAAARGDEPFGSVLVRDDEVIMRDSNRIVTESDIRRHPELQLAYRACREYD 73 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 + + +Y + EPC MCA ++ A R+ YG + G Sbjct: 74 ADERAAMVMYTSTEPCPMCAGGMATAGFARVVYGVGGDEIG 114 >gi|58261492|ref|XP_568156.1| hypothetical protein CNL06320 [Cryptococcus neoformans var. neoformans JEC21] gi|57230238|gb|AAW46639.1| hypothetical protein CNL06320 [Cryptococcus neoformans var. neoformans JEC21] Length = 209 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 6/74 (8%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 NN+++ N E+ D T H E+ AIR+ EI P+ +Y T EPC MC + I Sbjct: 65 NNELLCSGYNSQLEIGDPTEHGEVNAIRI------TEIWPQSWIYTTAEPCPMCGSTILQ 118 Query: 93 ARIRRLYYGASNPK 106 + +R+ YG S+P Sbjct: 119 SGFKRVVYGTSSPD 132 >gi|291005515|ref|ZP_06563488.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338] Length = 160 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 49/94 (52%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ A+E A + P GAV V + +I++ N+ D TAHAE++AIR C+ L Sbjct: 11 WMARAIELATRSVADGGGPFGAVVVKDGEIVATGHNQVTTNLDPTAHAEVVAIRNACQAL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L L + EPC MC A+ AR+ + Y Sbjct: 71 GTFKLDGCVLVTSCEPCPMCMASALWARMESVVY 104 >gi|294495182|ref|YP_003541675.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii DSM 5219] gi|292666181|gb|ADE36030.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii DSM 5219] Length = 147 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 3/97 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA + IP+G+V V + II R N + D AHAEI +R RI Sbjct: 4 FMKEAINEAMAGRDKGGIPIGSVLVRDGMIIGRGHNLRVQNDDPLAHAEISCMRDAGRIG 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 S + LY TL PC +CA A+ I+++ G S Sbjct: 64 S---YADTVLYSTLMPCYLCAGAVVQFGIKKVVVGES 97 >gi|294654357|ref|XP_456407.2| DEHA2A01584p [Debaryomyces hansenii CBS767] gi|199428817|emb|CAG84359.2| DEHA2A01584p [Debaryomyces hansenii] Length = 321 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 29/158 (18%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL A + NE PV + V N+I+S N + T HAE +AI ++ Sbjct: 11 MAIALFIGYRAMINNETPVACILVSRSTNQILSIGYNDTNRSLNGTRHAEFIAID---KV 67 Query: 66 LSQ-------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 +SQ +V LYVT+EPC MCA+A+ I + YG N + GG N Sbjct: 68 MSQIPVHDRSDIAKIQGFFGDVILYVTVEPCIMCASALKQIGIGYVVYGCGNDRFGG--N 125 Query: 113 GTQFYTLATCHHSP-----EIYPGISEQRSRQIIQDFF 145 G T+ + H + Y G+ + Q++++F+ Sbjct: 126 G----TILSIHQDKINKAYQSYGGVLRTEAVQLLRNFY 159 >gi|327278242|ref|XP_003223871.1| PREDICTED: tRNA-specific adenosine deaminase-like protein 3-like [Anolis carolinensis] Length = 353 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 14/146 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A++ AQ A + PVGAV V + K+++ G+ R+ + H + G Sbjct: 214 MELAIQAAQQGAKQGMRPVGAVVVDPSSGKVLA-VGHDCRDGLNPIDH------QSGHSS 266 Query: 66 LSQEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 S LP + D+Y+T EPC MCA ++ +RI R++YG +P G + ++ Sbjct: 267 PSTNGLPYICTGYDMYLTREPCAMCAMSLVHSRIERVFYGVPSPH-GALGTALHIHSRRD 325 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147 +H E++ G+ E R R + Q+ ++ Sbjct: 326 LNHRYEVFRGVLEGRCRSLEQESARD 351 >gi|134097849|ref|YP_001103510.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338] gi|133910472|emb|CAM00585.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338] Length = 162 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 49/94 (52%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ A+E A + P GAV V + +I++ N+ D TAHAE++AIR C+ L Sbjct: 13 WMARAIELATRSVADGGGPFGAVVVKDGEIVATGHNQVTTNLDPTAHAEVVAIRNACQAL 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L L + EPC MC A+ AR+ + Y Sbjct: 73 GTFKLDGCVLVTSCEPCPMCMASALWARMESVVY 106 >gi|21223347|ref|NP_629126.1| deaminase [Streptomyces coelicolor A3(2)] gi|256785550|ref|ZP_05523981.1| deaminase [Streptomyces lividans TK24] gi|289769446|ref|ZP_06528824.1| deaminase [Streptomyces lividans TK24] gi|20520975|emb|CAD30959.1| putative deaminase [Streptomyces coelicolor A3(2)] gi|289699645|gb|EFD67074.1| deaminase [Streptomyces lividans TK24] Length = 167 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 3/115 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+E A + P GA+ +I++ N+ D TAHAE+ AIR C+ L Sbjct: 17 WMDKAIELATTSVRNGGGPFGALIAKGGEIVALGNNQVTAGLDPTAHAEVSAIRAACKAL 76 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTL 119 L L + EPC MC ++ AR+ RL + A + G ++ +FY L Sbjct: 77 DTFSLEGCTLVTSCEPCPMCLSSALWARVDRLVFSADRHDAAVAGFDD-RKFYDL 130 >gi|111021958|ref|YP_704930.1| guanine deaminase [Rhodococcus jostii RHA1] gi|110821488|gb|ABG96772.1| possible guanine deaminase [Rhodococcus jostii RHA1] Length = 161 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 1/95 (1%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A+E A P GAVAV + +IS N DVT HAE+ AI C Sbjct: 17 AIELADETGDAGNRPFGAVAVGADGHVISEGANSVATSADVTEHAELDAITTACGEGRTG 76 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L +Y + EPC MC+AA+ A I R+ Y AS+ Sbjct: 77 DLVGATMYASGEPCPMCSAAMVWAGITRVVYAASS 111 >gi|114045649|ref|YP_736199.1| CMP/dCMP deaminase, zinc-binding protein [Shewanella sp. MR-7] gi|113887091|gb|ABI41142.1| CMP/dCMP deaminase, zinc-binding protein [Shewanella sp. MR-7] Length = 157 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 1/88 (1%) Query: 12 LEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 L AQ +P AV V + +I++ NR + L D TAHAEI AIRM +L Q Sbjct: 13 LALAQKEVEGTGLPFSAVIVDESGRIVAEGVNRVQALHDCTAHAEIQAIRMATLLLKQVS 72 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRL 98 L + L + EPC C AI LA+I R+ Sbjct: 73 LEGMTLIASGEPCGFCYMAIQLAKISRV 100 >gi|254495568|ref|ZP_05108490.1| cytosine deaminase [Legionella drancourtii LLAP12] gi|254355138|gb|EET13751.1| cytosine deaminase [Legionella drancourtii LLAP12] Length = 147 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 9/93 (9%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI----RMG 62 ++ A+EEA+ + IP+GAV V ++II R N+ + H E+ A+ R Sbjct: 6 YLEAAIEEARRSLAEGGIPIGAVLVYQDRIIGRGHNQRVQKGSAILHGEMDALENAGRQQ 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 +I Q I LY TL PC MC+ AI L +I Sbjct: 66 AKIYEQSI-----LYTTLSPCAMCSGAILLYKI 93 >gi|241950789|ref|XP_002418117.1| tRNA-specific adenosine deaminase subunit, putative; tRNA-specific adenosine-34 deaminase subunit, putative [Candida dubliniensis CD36] gi|223641456|emb|CAX43417.1| tRNA-specific adenosine deaminase subunit, putative [Candida dubliniensis CD36] Length = 280 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 4/110 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M+ +L A L NE PV + V ++KIIS N + T HAE +A++ Sbjct: 11 YMATSLFVGYKALLNNETPVSCIVVDSKSDKIISIGYNYTNHSLNGTQHAEFIALQRFTE 70 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 ++ LYVT+EPC MCA+ + I ++ +G N + GG NGT Sbjct: 71 QKPSIGYNDLILYVTVEPCIMCASYLRQLGIGKVIFGCGNDRFGG--NGT 118 >gi|253743085|gb|EES99615.1| Cytosine deaminase, putative [Giardia intestinalis ATCC 50581] Length = 163 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 14/143 (9%) Query: 12 LEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 EEA A E+PVG A+ + +I++ N ++ HAE++A+ ++ Sbjct: 5 FEEANLALAEREVPVGCAIVDGSGRILATGRNATNRTRNSMCHAEMVALA---QVPLDAD 61 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130 L LYVT+EPC MCAAA+S+ + + Y A N K GG + L +H + Sbjct: 62 LTGCVLYVTIEPCIMCAAALSIVGLTNVVYFARNDKFGGCGS-----VLDVNNHIESPWT 116 Query: 131 GIS-----EQRSRQIIQDFFKER 148 + +R+ ++Q+FF+ + Sbjct: 117 KLDAKYMPNERAVHLLQEFFERK 139 >gi|313664896|ref|YP_004046767.1| cytidine and deoxycytidylate deaminase zinc-binding region [Mycoplasma leachii PG50] gi|312950055|gb|ADR24651.1| cytidine and deoxycytidylate deaminase zinc-binding region [Mycoplasma leachii PG50] Length = 147 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 1/109 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M N + + E++ N+IPV + NN I+S A N + KD++ HAEI I Sbjct: 1 MDDFNNILDLLINESKKTIKHNDIPVSCCIIDSNNNILSLAINSRYKNKDISQHAEINVI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 L+ L + L TLEPC MC +AI +I +YY + K G Sbjct: 61 NNLINKLNNFNLSKYKLITTLEPCMMCYSAIKQVKINTIYYLVESYKFG 109 >gi|184201786|ref|YP_001855993.1| guanine deaminase [Kocuria rhizophila DC2201] gi|183582016|dbj|BAG30487.1| guanine deaminase [Kocuria rhizophila DC2201] Length = 170 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 40/79 (50%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA+ V + A NR D TAHAE+ AIR C L L LY + EPC Sbjct: 37 PFGALLVTADGREFTAVNRVTADNDPTAHAEVCAIRAACSALGTHDLGGATLYSSCEPCP 96 Query: 85 MCAAAISLARIRRLYYGAS 103 MC +A AR+ R+++ A Sbjct: 97 MCLSAALWARLDRVFFAAD 115 >gi|85014509|ref|XP_955750.1| deoxycytidylate deaminase [Encephalitozoon cuniculi GB-M1] gi|19171444|emb|CAD27169.1| BELONGS TO THE CYTIDINE AND DEOXYCYTIDYLATE DEAMINASE FAMILY [Encephalitozoon cuniculi GB-M1] Length = 150 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 7/104 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EA A E+PVG V V N ++S++ N K HAE+++IR Sbjct: 9 SFFMEMAVKEAMRAFDALEVPVGCVVVRNGIVVSKSHNMTNANKSPLDHAEVISIR---- 64 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 YVT EPC MC + + +YYG N G Sbjct: 65 ---DADCSNSTFYVTCEPCIMCMGILGRLKGVEVYYGCRNEVFG 105 >gi|294950861|ref|XP_002786810.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239901164|gb|EER18606.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 232 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 2/105 (1%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71 L L+ P GA N+ ++ A N +D T HAE+ AIRM +L + L Sbjct: 6 LSATTGVKLKEGGPFGACITRNDVVVCCAHNTFFSDRDPTCHAEMNAIRMAMHLLKTDDL 65 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 +Y + EPC MC AI + IR LY G + +NG ++ Sbjct: 66 AGCVIYSSFEPCPMCWGAILASGIRLLYVGLD--RHTAAKNGVEY 108 >gi|37521331|ref|NP_924708.1| hypothetical protein gll1762 [Gloeobacter violaceus PCC 7421] gi|35212328|dbj|BAC89703.1| gll1762 [Gloeobacter violaceus PCC 7421] Length = 182 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 8/137 (5%) Query: 14 EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL---SQEI 70 EA A + VGA+ K+++ N+ E DVTAH E+ +R L S E Sbjct: 29 EANAAVDEGKAGVGAMLTWRGKVLALEHNQYAETHDVTAHGEMSILRAQAERLDGMSDED 88 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGA----SNPKGGGIENGTQFYTLATCHHSP 126 ++ +YVTLEPC MC +A+SL I R+ Y A +N + +E T P Sbjct: 89 KKDLCMYVTLEPCLMCLSAMSLVGIPRVVYAALSEDANIEQALLEGATARNVNDALVRGP 148 Query: 127 -EIYPGISEQRSRQIIQ 142 E+ PG+ + ++++ Sbjct: 149 LELVPGVRREEGIKLLE 165 >gi|226364462|ref|YP_002782244.1| deaminase [Rhodococcus opacus B4] gi|226242951|dbj|BAH53299.1| putative deaminase [Rhodococcus opacus B4] Length = 161 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 1/95 (1%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A+E A P GAVAV + +IS N DVT HAE+ AI C Sbjct: 17 AIELADETGDAGNRPFGAVAVGADGHVISEGANSVATSADVTEHAELDAITTACGEGRTG 76 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L +Y + EPC MC+AA+ A I R+ Y AS+ Sbjct: 77 DLVGATMYASGEPCPMCSAAMVWAGITRVVYAASS 111 >gi|46205243|ref|ZP_00209765.1| COG0590: Cytosine/adenosine deaminases [Magnetospirillum magnetotacticum MS-1] Length = 141 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 45/75 (60%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + ++I+RA NR D + HAE++A+R + L + L + +Y + PC Sbjct: 13 PYGAVIVRDGEVIARAANRIHRTNDPSDHAEMVALRAASQRLGRPKLDDCIVYASGRPCP 72 Query: 85 MCAAAISLARIRRLY 99 MC AA+ LA +++ Y Sbjct: 73 MCHAAMRLAGVKQGY 87 >gi|260943466|ref|XP_002616031.1| hypothetical protein CLUG_03273 [Clavispora lusitaniae ATCC 42720] gi|238849680|gb|EEQ39144.1| hypothetical protein CLUG_03273 [Clavispora lusitaniae ATCC 42720] Length = 296 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 19/122 (15%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M+ A A A E PV V V + I++ N + T HAE +AI + Sbjct: 9 YMAVATFVAYRAFANGETPVACVFVHEPSQTILAFGCNDTNRSLNGTRHAEFMAID---K 65 Query: 65 ILSQEIL----PE--------VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 IL + L PE V LYVT+EPC MCA+A+ I+++Y+GA+N + GG N Sbjct: 66 ILQENHLLNSSPEKVAAFFSQVVLYVTVEPCVMCASALRHVGIKKVYFGAANDRFGG--N 123 Query: 113 GT 114 GT Sbjct: 124 GT 125 >gi|119505172|ref|ZP_01627247.1| putative zinc-binding hydrolase [marine gamma proteobacterium HTCC2080] gi|119458863|gb|EAW39963.1| putative zinc-binding hydrolase [marine gamma proteobacterium HTCC2080] Length = 78 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%) Query: 21 RNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 + E+PVGAV A + ++++ A N D TAHAE+LA+R+G L+ LP LYVT Sbjct: 14 KGEVPVGAVLAADSGEVLAVASNAQIMSCDPTAHAEMLALRLGAEKLNNYRLPGCTLYVT 73 Query: 80 LEPCT 84 LEPCT Sbjct: 74 LEPCT 78 >gi|46204383|ref|ZP_00209388.1| COG0590: Cytosine/adenosine deaminases [Magnetospirillum magnetotacticum MS-1] Length = 111 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 39/77 (50%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + + NR + D TAHAE+ AIR C L L LY + EPC Sbjct: 28 PFGAVLVTADGQVFEGNNRVTQDNDPTAHAEVTAIRRACAALGTFDLTGATLYSSCEPCP 87 Query: 85 MCAAAISLARIRRLYYG 101 MC A+ AR+ ++Y Sbjct: 88 MCLASALWARVHAVHYA 104 >gi|229820162|ref|YP_002881688.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333] gi|229566075|gb|ACQ79926.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333] Length = 163 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 5/104 (4%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN-----KIISRAGNRNRELKDVTAHAEI 56 + + F++ A++ A P GA+ V ++ +++ NR D TAHAE+ Sbjct: 5 SRDSAFLALAVDLATANVADGGGPFGALIVRSDAQPGDHVVATGTNRVTRDHDATAHAEV 64 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 AIR R + L + LY + EPC +C AA AR+ RL Y Sbjct: 65 EAIRAAGRAVGSHALTGMTLYASCEPCPLCLAAALWARLDRLVY 108 >gi|218531388|ref|YP_002422204.1| CMP/dCMP deaminase zinc-binding [Methylobacterium chloromethanicum CM4] gi|218523691|gb|ACK84276.1| CMP/dCMP deaminase zinc-binding [Methylobacterium chloromethanicum CM4] Length = 153 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 4/92 (4%) Query: 12 LEEAQNAALRNEI----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 L EA AL N P GAV V + +++ RA NR D + HAE++AIR + L Sbjct: 8 LREATEIALANVAEGGRPYGAVIVRDGEVVVRAANRIHATNDPSDHAEMVAIRAASQQLG 67 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 + L + +Y + PC MC AA+ LA +++ Y Sbjct: 68 RPKLDDCIVYASGRPCPMCHAAMRLAGVKQGY 99 >gi|298490596|ref|YP_003720773.1| CMP/dCMP deaminase zinc-binding protein ['Nostoc azollae' 0708] gi|298232514|gb|ADI63650.1| CMP/dCMP deaminase zinc-binding protein ['Nostoc azollae' 0708] Length = 143 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 3/96 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ EA+ IP+G+V V N KI+ + N+ + D HAEI +R R+ + Sbjct: 5 MQAAISEAKQGRDEGGIPIGSVLVRNGKILGKGHNKRVQDGDPVTHAEIDCLRNAGRLGN 64 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + + LY TL PC +CA A+ I+++ G S Sbjct: 65 YK---GITLYSTLMPCYLCAGAVVQFGIKKVIAGES 97 >gi|241203539|ref|YP_002974635.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857429|gb|ACS55096.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 158 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 55/110 (50%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ F+ A+ +++A + P G+V V + ++I RA N D+T HAE+ ++ Sbjct: 1 MENHEPFLREAIALSKSAMANGDEPFGSVLVKDGEVILRAENSVFTGHDMTNHAEMNLVK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 + + L LY + EPC MC+ AI + I R+ + S + G I Sbjct: 61 LAAQHYDTAFLAGCTLYTSTEPCAMCSGAIYWSGIGRMVFACSETRLGEI 110 >gi|255035691|ref|YP_003086312.1| CMP/dCMP deaminase zinc-binding [Dyadobacter fermentans DSM 18053] gi|254948447|gb|ACT93147.1| CMP/dCMP deaminase zinc-binding [Dyadobacter fermentans DSM 18053] Length = 140 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 53/120 (44%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + + F+ E A A PVGAV V I+ R D+T HAE+ AIR Sbjct: 1 MDEHHKFLQRCHELALQAGRSGNTPVGAVIVREGVIVGEGIEATRPDNDITRHAEVEAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L +Y T EPC +C+ AI +I + + + P GG+ + T A Sbjct: 61 DALNRLGTDKLTGCAMYTTHEPCILCSYAIRHYQISWVGFEHAVPAVGGVSSPWPILTAA 120 >gi|120599757|ref|YP_964331.1| cytosine deaminase [Shewanella sp. W3-18-1] gi|120559850|gb|ABM25777.1| Cytosine deaminase [Shewanella sp. W3-18-1] Length = 145 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A++EA+ IP+G+V V++ I++R N+ + HAE+ + R L Sbjct: 4 FLQAAIDEAKQGLAEGGIPIGSVLVIDGNIVARGHNKRVQQGSAVLHAEMDCLENAGR-L 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 S + LY TL PC MC+ AI L I ++ G Sbjct: 63 SAADYQKGTLYSTLSPCDMCSGAILLYGIPKVVVG 97 >gi|218245366|ref|YP_002370737.1| CMP/dCMP deaminase [Cyanothece sp. PCC 8801] gi|257058401|ref|YP_003136289.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8802] gi|218165844|gb|ACK64581.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8801] gi|256588567|gb|ACU99453.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8802] Length = 139 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 3/96 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ EA+ IP+G+V V ++II + N+ + D HAEI +R RI + Sbjct: 1 MKAAIAEAKQGLQEGGIPIGSVLVKGDQIIGKGHNKRVQDGDPVTHAEIDCLRNAGRIGN 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + + LY TL PC +CA A+ I+++ G S Sbjct: 61 YQ---DTVLYSTLMPCYLCAGAVVQFGIKKVIAGES 93 >gi|281210912|gb|EFA85078.1| cytidine deaminase-like protein [Polysphondylium pallidum PN500] Length = 499 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 41/67 (61%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 LY+T EPC MC+ A+ +RI+R+ +GA P GG+ + +T + +H ++Y GI E Sbjct: 424 LYITREPCIMCSMALVHSRIKRVIFGAVQPNAGGLGGCLKVHTQKSINHRFQVYHGILEN 483 Query: 136 RSRQIIQ 142 + + + + Sbjct: 484 QCKLLFE 490 >gi|219129188|ref|XP_002184777.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217403886|gb|EEC43836.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 564 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 7/88 (7%) Query: 23 EIPVGAVAVLNNKIISRAGN-------RNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75 ++P GAV +++ I++RA N R DVT HAE+ +R+ L+ E Sbjct: 28 KMPFGAVLAIDSVIVARAHNQCPAAAKRGGGTGDVTRHAEMELVRLFTSKLTAEERSNAV 87 Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGAS 103 LY + EPC MCA AI + + ++ YG S Sbjct: 88 LYTSTEPCVMCAGAIYWSGVSKVVYGCS 115 >gi|255718193|ref|XP_002555377.1| KLTH0G07832p [Lachancea thermotolerans] gi|238936761|emb|CAR24940.1| KLTH0G07832p [Lachancea thermotolerans] Length = 250 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 9/114 (7%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNR-NRELKDVTAHAEILAI-RMG 62 FM A + A+ A E PV + V +++++ N NR L + AHAE + I ++ Sbjct: 9 FMRMATKLARYALDHGETPVACIFVHTPADQVVAYGMNDTNRSLTGI-AHAEFMGIEQIQ 67 Query: 63 CRILSQE--ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +Q+ I ++ LYVT+EPC MCA+A+ I+++ +G N + GG NG+ Sbjct: 68 SKFGAQDTSIFKDITLYVTVEPCIMCASALKQLGIQKVVFGCGNERFGG--NGS 119 >gi|116250294|ref|YP_766132.1| purine deaminase [Rhizobium leguminosarum bv. viciae 3841] gi|115254942|emb|CAK06016.1| putative purine deaminase [Rhizobium leguminosarum bv. viciae 3841] Length = 156 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 56/110 (50%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ F+ A+ +++A + P G++ V + ++I RA N D+T HAE+ ++ Sbjct: 1 MENHEPFLREAIALSRSAVENGDEPFGSLLVKDGEVILRAENSVFTGHDMTNHAEMNLVK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 + + L + LY + EPC MC+ AI + I R+ + S + G I Sbjct: 61 LAAQHYDTAFLADCTLYTSTEPCAMCSGAIYWSGIGRMVFACSEARLGEI 110 >gi|192291626|ref|YP_001992231.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris TIE-1] gi|192285375|gb|ACF01756.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris TIE-1] Length = 214 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 2/99 (2%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M+ A+E + A + + GAV V + +++S GN D +AHAE+ AIR C+ Sbjct: 64 YMTQAIELMRKAGVVEKTGGAFGAVIVRDGEVLSATGNSVLRDNDPSAHAEVNAIRAACK 123 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + L +Y + E C MC A AR+ R++Y AS Sbjct: 124 KVGAPNLRGATMYTSCECCPMCYATAYWARLDRIFYAAS 162 >gi|157092991|gb|ABV22150.1| cytidine/deoxycytidylate deaminase [Perkinsus chesapeaki] Length = 295 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 40/78 (51%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA V N +S N KD T HAE+ AIR R L + L + LY T EPC Sbjct: 42 PFGASVVHNGMPVSCGHNTVLFDKDPTCHAEVNAIRHAVRDLGRSELSDCVLYTTCEPCP 101 Query: 85 MCAAAISLARIRRLYYGA 102 MC AI + ++ +Y GA Sbjct: 102 MCWGAIMASGLKVIYVGA 119 >gi|39935973|ref|NP_948249.1| cytidine/deoxycytidylate deaminase [Rhodopseudomonas palustris CGA009] gi|39649827|emb|CAE28349.1| Cytidine/deoxycytidylate deaminase:Tat pathway signal [Rhodopseudomonas palustris CGA009] Length = 214 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 2/99 (2%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M+ A+E + A + + GAV V + +++S GN D +AHAE+ AIR C+ Sbjct: 64 YMTQAIELMRKAGVVEKTGGAFGAVIVRDGEVLSATGNSVLRDNDPSAHAEVNAIRAACK 123 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + L +Y + E C MC A AR+ R++Y AS Sbjct: 124 KVGAPNLRGATMYTSCECCPMCYATAYWARLDRIFYAAS 162 >gi|327192975|gb|EGE59890.1| putative purine deaminase protein [Rhizobium etli CNPAF512] Length = 158 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 21/137 (15%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P G+V V N ++I RA N D+T HAE+ +++ + L + LY + EPC Sbjct: 26 PFGSVLVKNGEVILRAENSVFSGHDMTNHAEMNLVKLAAQHYDTAFLADCTLYTSTEPCA 85 Query: 85 MCAAAISLARIRRLYYGASNPKGGGI-------------ENGTQFYTLATCHHSPEIYPG 131 MC+ AI + I + + S + G I + G +F T+ + P Sbjct: 86 MCSGAIYWSGIGHMVFACSETRLGEIAGIGLNVPSRAVLQTGARFVTV--------VGPT 137 Query: 132 ISEQRSRQIIQDFFKER 148 E + ++ Q+F+ + Sbjct: 138 SLEDEAAEVHQEFWPKH 154 >gi|300786467|ref|YP_003766758.1| deaminase [Amycolatopsis mediterranei U32] gi|299795981|gb|ADJ46356.1| deaminase [Amycolatopsis mediterranei U32] Length = 160 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 4/93 (4%) Query: 12 LEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 L+EA A RN P GA+ V + KI+S NR D TAHAE++AIR C+ L Sbjct: 12 LDEAVRIATRNVENGGGPFGALIVRDGKIVSTGVNRVTANLDPTAHAEVVAIRAACQELG 71 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L L + EPC MC ++ AR+ ++ + Sbjct: 72 TFKLDGCVLVSSCEPCPMCLSSALWARVDKVLF 104 >gi|84497975|ref|ZP_00996772.1| putative deaminase [Janibacter sp. HTCC2649] gi|84381475|gb|EAP97358.1| putative deaminase [Janibacter sp. HTCC2649] Length = 158 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 38/71 (53%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V +I NR D TAHAE++A+R CR + LP +Y + EPC Sbjct: 25 PFGAVVVRGGDVIGEGTNRVTLDLDPTAHAEVVALRNACREVGDFSLPGATVYASCEPCP 84 Query: 85 MCAAAISLARI 95 +C +A AR+ Sbjct: 85 LCLSASLWARV 95 >gi|262042008|ref|ZP_06015188.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040626|gb|EEW41717.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 152 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 47/83 (56%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V N++I++ + N + TAHAE+ A+R L +L E +Y + +PC Sbjct: 25 PFGAVLVRNDEIVAESVNTFHLSGEPTAHAELNAVRDLAARLGSAVLRECVIYASGQPCP 84 Query: 85 MCAAAISLARIRRLYYGASNPKG 107 MC +A+ L +R +++ SN G Sbjct: 85 MCLSALYLTGVREVFFANSNQDG 107 >gi|116326904|ref|YP_796624.1| cytosine/adenosine deaminase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332428|ref|YP_802146.1| cytosine/adenosine deaminase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116119648|gb|ABJ77691.1| Cytosine/adenosine deaminase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116126117|gb|ABJ77388.1| Cytosine/adenosine deaminase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 155 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 2/129 (1%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 R E+P ++IS N + D + H+EIL IR + L L + L +L Sbjct: 25 REEVPSFTRIYQKEELISETFNEVEKHLDSSFHSEILCIRDAKKKLKTRYLTDCTLITSL 84 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MC I L+RI ++ Y +G GI + + + + PE+ I + S+ Sbjct: 85 EPCLMCTGTILLSRIPKIIYLLPARQGEGI-SSLSIEMIYSRNFFPELI-CIPAEISKNA 142 Query: 141 IQDFFKERR 149 + FFK RR Sbjct: 143 FKSFFKIRR 151 >gi|303328437|ref|ZP_07358874.1| zinc-binding domain protein [Desulfovibrio sp. 3_1_syn3] gi|302861431|gb|EFL84368.1| zinc-binding domain protein [Desulfovibrio sp. 3_1_syn3] Length = 90 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 46/90 (51%) Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R G L L L VTLEPC MCAAA+ AR+ + YGA++ G + + ++ Sbjct: 1 RAGGAALGNYRLAGCVLAVTLEPCAMCAAALVHARLAGVVYGAADDLAGAVISRAEYLDA 60 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 C+H G+ + +++DFF+ +R Sbjct: 61 PFCNHRVWHMGGVRAEACAALLRDFFERKR 90 >gi|46447463|ref|YP_008828.1| hypothetical protein pc1829 [Candidatus Protochlamydia amoebophila UWE25] gi|46401104|emb|CAF24553.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 156 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 63/144 (43%), Gaps = 4/144 (2%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A+E A ++E P GA V +I++ N + +D T HAE+ IR R Sbjct: 4 YMRRAIESAYEGIDKDEGGPFGACIVDKQGQILAVTHNTVLKDQDPTCHAEMNCIREAAR 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLATC 122 L IL L+ T EPC MC AAI ARI ++Y G G ++ + L Sbjct: 64 RLKTHILSGYTLFTTAEPCPMCLAAIYWARIEKVYIGVKKECAARYGFDDAFFYEQLLLP 123 Query: 123 HHSPEIYPGISEQRSRQIIQDFFK 146 E+ S+Q + F K Sbjct: 124 PEKREVLATFDPDSSKQCEEIFVK 147 >gi|218663270|ref|ZP_03519200.1| CMP/dCMP deaminase zinc-binding protein [Rhizobium etli IE4771] Length = 157 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 54/110 (49%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ F+ A+ +++A + P G+V V + +I RA N D+T HAE+ ++ Sbjct: 1 MENHEPFLREAIALSKSAMANGDEPFGSVLVRDGDVILRAENSVFTGHDMTNHAEMNLVK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 + + L + LY + EPC MC+ AI + I + + S + G I Sbjct: 61 LAAKHYDPAFLADCTLYTSTEPCAMCSGAIYWSGIGHMVFACSETRLGEI 110 >gi|254411343|ref|ZP_05025120.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Microcoleus chthonoplastes PCC 7420] gi|196181844|gb|EDX76831.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Microcoleus chthonoplastes PCC 7420] Length = 143 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 3/105 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A+ +A+ IP+G+V V +II + N+ + D HAEI +R RI Sbjct: 4 FMAAAIAQAKQGLREGGIPIGSVLVKEGQIIGQGYNKRVQDNDPVTHAEIDCLRHAGRIG 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 + + LY TL PC +CA A+ I+++ G S G E Sbjct: 64 N---YNDTILYSTLMPCYLCAGAVVQFGIKKVIAGESQTFAGARE 105 >gi|115377134|ref|ZP_01464348.1| riboflavin biosynthesis protein RibD [Stigmatella aurantiaca DW4/3-1] gi|310822848|ref|YP_003955206.1| Riboflavin biosynthesis protein RibD [Stigmatella aurantiaca DW4/3-1] gi|115365843|gb|EAU64864.1| riboflavin biosynthesis protein RibD [Stigmatella aurantiaca DW4/3-1] gi|309395920|gb|ADO73379.1| Riboflavin biosynthesis protein RibD [Stigmatella aurantiaca DW4/3-1] Length = 387 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/151 (35%), Positives = 71/151 (47%), Gaps = 27/151 (17%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GC 63 FM ALEEA R VGAV V +II+R ++ K TAHAE++A+ G Sbjct: 31 FMRIALEEAAKGLGRTSPNPAVGAVLVKGGRIIARGYHK----KAGTAHAEVVALEAAGP 86 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGAS--NPKGGGIENGTQ 115 R DLY TLEPC C+ AI A +RR+ G+S NPK NG Sbjct: 87 RARG------ADLYTTLEPCDHYGRTGPCSQAIIDAGVRRVICGSSDPNPK----VNGKG 136 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 L E+ G+ ++ + Q+ Q FFK Sbjct: 137 VARLKKA--GVEVLTGVLQKDADQLNQPFFK 165 >gi|220913945|ref|YP_002489254.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6] gi|219860823|gb|ACL41165.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6] Length = 164 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 47/97 (48%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F++ ++ A L + P GA+ V + NR D TAHAE+ AIR CR + Sbjct: 10 FLARSIRLATANVLNSGGPFGAMIVTADGKTFDGVNRVTADNDPTAHAEVTAIRTACREM 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L LY + EPC MC A+ AR+ R+ + A Sbjct: 70 GTFDLSGAVLYTSCEPCPMCLASALWARVERVVFAAD 106 >gi|116075283|ref|ZP_01472543.1| hypothetical protein RS9916_27024 [Synechococcus sp. RS9916] gi|116067480|gb|EAU73234.1| hypothetical protein RS9916_27024 [Synechococcus sp. RS9916] Length = 159 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 42/79 (53%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV + ++++ AGN D +AHAE+ AIR C+ L L +Y + E C Sbjct: 29 PFGAVVAKDGEVVAAAGNSVVRDLDPSAHAEVNAIRAACKKLGTWDLSGCVMYTSCECCP 88 Query: 85 MCAAAISLARIRRLYYGAS 103 MC A A IR ++Y A+ Sbjct: 89 MCYATAYWAGIRTVFYAAA 107 >gi|332308193|ref|YP_004436044.1| CMP/dCMP deaminase zinc-binding protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175522|gb|AEE24776.1| CMP/dCMP deaminase zinc-binding protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 145 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA+ IP+G+V V ++II R NR + H E+ A+ R Sbjct: 4 FMQAAIDEAKQGLAEGGIPIGSVLVYQDEIIGRGHNRRVQSGSPILHGEMDALENAGR-Q 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + LY TL PC+MC+ I L I ++ G Sbjct: 63 PASVYKASTLYTTLSPCSMCSGTILLYGIPKVVIG 97 >gi|257067810|ref|YP_003154065.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810] gi|256558628|gb|ACU84475.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810] Length = 158 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 43/90 (47%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 A+E A + R P GAV + + NR D TAHAE+ AIR CR Sbjct: 13 AVELAVASVARGGGPFGAVVLTADGTAVEGANRVTAAHDPTAHAEVEAIREACRRSGSHE 72 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L LY + EPC MC A+ AR+ R+ + Sbjct: 73 LRGAVLYASCEPCPMCLASALWARVERVEF 102 >gi|218460046|ref|ZP_03500137.1| CMP/dCMP deaminase zinc-binding protein [Rhizobium etli Kim 5] Length = 187 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 54/110 (49%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ F+ A+ +++A + P G+V V + +I RA N D+T HAE+ ++ Sbjct: 1 MENHEPFLREAIALSKSAMANGDEPFGSVLVRDGDVILRAENSVFTGHDMTNHAEMNLVK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 + + L + LY + EPC MC+ AI + I + + S + G I Sbjct: 61 LAAKHYDPAFLADCTLYTSTEPCAMCSGAIYWSGIGHMVFACSETRLGEI 110 >gi|254773714|ref|ZP_05215230.1| cytidine/deoxycytidylate deaminase [Mycobacterium avium subsp. avium ATCC 25291] Length = 177 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 37/66 (56%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P V V + ++++ + N+ + D TAHAEILAIR C L E L + +YV PC Sbjct: 33 PFATVIVQDGEVLAESANKAAQTNDPTAHAEILAIRAACLKLGTEHLVDATIYVLAHPCP 92 Query: 85 MCAAAI 90 MC A+ Sbjct: 93 MCLGAL 98 >gi|32473097|ref|NP_866091.1| cytidine and deoxycytidylate deaminase family protein [Rhodopirellula baltica SH 1] gi|32397776|emb|CAD73777.1| probable cytidine and deoxycytidylate deaminase family protein [Rhodopirellula baltica SH 1] Length = 165 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 8/75 (10%) Query: 29 VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88 +AV +N+++SR D TAHAE++AI + L L + L T EPC MC A Sbjct: 46 IAVAHNQVVSRC--------DPTAHAEVMAIGKAAKKLGDPDLSGLWLVSTGEPCPMCLA 97 Query: 89 AISLARIRRLYYGAS 103 AI LA I + YGAS Sbjct: 98 AIGLAGIEHVAYGAS 112 >gi|41406760|ref|NP_959596.1| hypothetical protein MAP0662c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118463808|ref|YP_880050.1| cytidine/deoxycytidylate deaminase [Mycobacterium avium 104] gi|41395110|gb|AAS02979.1| hypothetical protein MAP_0662c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118165095|gb|ABK65992.1| cytidine/deoxycytidylate deaminase [Mycobacterium avium 104] Length = 166 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 37/66 (56%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P V V + ++++ + N+ + D TAHAEILAIR C L E L + +YV PC Sbjct: 22 PFATVIVQDGEVLAESANKAAQTNDPTAHAEILAIRAACLKLGTEHLVDATIYVLAHPCP 81 Query: 85 MCAAAI 90 MC A+ Sbjct: 82 MCLGAL 87 >gi|119386956|ref|YP_918011.1| CMP/dCMP deaminase, zinc-binding [Paracoccus denitrificans PD1222] gi|119377551|gb|ABL72315.1| CMP/dCMP deaminase, zinc-binding protein [Paracoccus denitrificans PD1222] Length = 157 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 6/115 (5%) Query: 12 LEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 LE+A A RN P GAV V + ++++ N D TAHAE++A+R L Sbjct: 9 LEQAVMLAHRNVQAGGRPFGAVVVRDGEVLATGVNETVATHDPTAHAELVALRAAALRLG 68 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLA 120 L ++ + +PC MC AA+ LA + +++Y SN G G+ + LA Sbjct: 69 SPDLSACVVHASGQPCPMCLAAMRLAGVTKVHYAYSNQDGAPYGLSTAALYEELA 123 >gi|302873074|ref|YP_003841707.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B] gi|307688768|ref|ZP_07631214.1| CMP/dCMP deaminase zinc-binding protein [Clostridium cellulovorans 743B] gi|302575931|gb|ADL49943.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B] Length = 167 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 41/160 (25%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALE + + + E+PVGAV ++II RA + + HAE+ Sbjct: 7 MRIALEIGKKSLEQGELPVGAVIFKGDEIIGRAYSSGESKQQFLRHAEM----------- 55 Query: 68 QEILPEVD-------------LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI---- 110 ++L EVD L+VTLEPC MC A A I +YY +P G + Sbjct: 56 -KVLWEVDEQGYSVRDRKNMQLFVTLEPCMMCLGAAMGAFIGEIYYSVPSPIDGAVALAE 114 Query: 111 ----ENGTQF--YTLATCHHSPEIYPGISEQRSRQIIQDF 144 N + YTL C + G+ ++ +++++ + Sbjct: 115 SSLNSNNVEIPSYTLPKC------FGGVLQEEGKELLKRY 148 >gi|325958148|ref|YP_004289614.1| Cytosine deaminase [Methanobacterium sp. AL-21] gi|325329580|gb|ADZ08642.1| Cytosine deaminase [Methanobacterium sp. AL-21] Length = 157 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA+ + IP+GA+ V + I+ R N + HAE+ I R+ Sbjct: 13 FMMEALKEAKKSLESGGIPIGAILVKDGVIVGRGHNNLLQKNSTILHAEMDCIENSGRLK 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS----NPKGGGIENGTQFYTL 119 ++ LY TL PC MC+ I L +I R+ G + P+ IE+G + L Sbjct: 73 GKD-YKRSTLYTTLSPCEMCSGTIILYKISRVVIGENENLKGPEKCLIESGIELKNL 128 >gi|319795234|ref|YP_004156874.1| cmp/dcmp deaminase zinc-binding protein [Variovorax paradoxus EPS] gi|315597697|gb|ADU38763.1| CMP/dCMP deaminase zinc-binding protein [Variovorax paradoxus EPS] Length = 176 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%) Query: 25 PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR-MGCRILSQEILPEVDLYVTLEP 82 P G+V V + ++++ A N E D T HAE AIR + R +S++ L LY + EP Sbjct: 43 PFGSVIVSADGEVLAEAYNNTGETGDCTGHAETNAIRALAGRGISRDTLAGATLYASGEP 102 Query: 83 CTMCAAAISLARIRRLYYG 101 C MCA AI + I R+ +G Sbjct: 103 CVMCAGAIFWSNIGRVVFG 121 >gi|242280630|ref|YP_002992759.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio salexigens DSM 2638] gi|242123524|gb|ACS81220.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio salexigens DSM 2638] Length = 145 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 3/102 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A + A+ + + +P+G+V V + KII N+ + D AH E+ IR R Sbjct: 6 FMEEAYKLAKKSFDQGGLPIGSVLVRDGKIIGSGHNQRVQKGDPIAHGEMDCIRNAGR-- 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 Q+ + +Y TL PC MC+ I I R+ G + GG Sbjct: 64 -QKTYKDTTIYTTLSPCMMCSGTIVQFGISRVVIGENRNFGG 104 >gi|218778327|ref|YP_002429645.1| CMP/dCMP deaminase zinc-binding [Desulfatibacillum alkenivorans AK-01] gi|218759711|gb|ACL02177.1| CMP/dCMP deaminase zinc-binding [Desulfatibacillum alkenivorans AK-01] Length = 169 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 12/147 (8%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV--TAHAEILAIRMGCR 64 FM+ ALE A+ A E PVG + V + ++I++ HAE++A+ R Sbjct: 6 FMNKALELARQALEAGEFPVGCILVHDGRVIAQGARVGVAGGGTGELEHAEMVAM---AR 62 Query: 65 ILSQEILP---EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + E P EV +Y T+EPC MC A+ + I ++ Y + GGG TL Sbjct: 63 FENMENAPPPSEVTIYCTMEPCLMCFGALMIHGITKIVYAYEDAMGGG--TALDRSTLPP 120 Query: 122 CHHSP--EIYPGISEQRSRQIIQDFFK 146 + EI P + +S + + FF Sbjct: 121 LYRDAEVEITPHVGRSQSLALFKAFFS 147 >gi|268611450|ref|ZP_06145177.1| putative Cytidine/deoxycytidylate deaminase, zinc-binding region (CMP/dCMP deaminase, zinc-binding) protein [Ruminococcus flavefaciens FD-1] Length = 211 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 7/115 (6%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRE---LKDVTAHAEI 56 K +V LEEA A IPVGA V + +++ + NR E L TAHAE+ Sbjct: 2 WKDISVQWQTVLEEAWTAFTSGSIPVGAAVFSKDGELLVKDHNRRNEPGTLNPRTAHAEL 61 Query: 57 LAIR-MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 I+ + CR + E +LY ++EPC MC AI ++ I+ L+ G+ + G + Sbjct: 62 NVIQHIDCRYGLN--IRETELYTSMEPCPMCMGAIVMSNIKHLHCGSHDRWCGAL 114 >gi|116671966|ref|YP_832899.1| CMP/dCMP deaminase, zinc-binding [Arthrobacter sp. FB24] gi|116612075|gb|ABK04799.1| CMP/dCMP deaminase, zinc-binding protein [Arthrobacter sp. FB24] Length = 164 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 38/79 (48%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + NR D TAHAE+ AIR C L L LY + EPC Sbjct: 28 PFGAVVVTADGQSFGGVNRVTATNDPTAHAEVTAIRRACSELGTFDLTGATLYTSCEPCP 87 Query: 85 MCAAAISLARIRRLYYGAS 103 MC A+ AR+ R+ + A Sbjct: 88 MCLASALWARVERVVFAAD 106 >gi|51246206|ref|YP_066090.1| cytosine deaminase [Desulfotalea psychrophila LSv54] gi|50877243|emb|CAG37083.1| probable cytosine deaminase [Desulfotalea psychrophila LSv54] Length = 145 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F + A+ EA+ IP+G+V V++ +I+ R N+ + V HAE+ + RI Sbjct: 4 FFAVAVAEARKGMATGGIPIGSVLVIDGQIVGRGHNQRVQRGSVVLHAEMDCLENAGRIK 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + LY TL PC MC+ A+ L I R+ G Sbjct: 64 AAD-YRRATLYSTLSPCDMCSGAVLLYGIPRVVIG 97 >gi|223938524|ref|ZP_03630416.1| Cytosine deaminase [bacterium Ellin514] gi|223892786|gb|EEF59255.1| Cytosine deaminase [bacterium Ellin514] Length = 145 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 1/97 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ A+EEA+ IP+G+V V KII R N+ + V HAE+ + R Sbjct: 2 DTFLQAAIEEAKKGLAAGGIPIGSVLVYEGKIIGRGHNQRVQHGSVIHHAEMNCLENSGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + LY TL PC MC+ A L +I + G Sbjct: 62 -QKASVYQKCTLYSTLSPCPMCSGAALLYKIPHVIVG 97 >gi|188591891|ref|YP_001796489.1| guanine deaminase [Cupriavidus taiwanensis LMG 19424] gi|170938265|emb|CAP63250.1| Guanine deaminase [Cupriavidus taiwanensis LMG 19424] Length = 145 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 45/84 (53%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 R P GAV VL+ ++++ N D T HAE+ A+R R L + L +Y + Sbjct: 14 RGARPFGAVLVLDGEVVATGVNDIVHSHDPTTHAEMEAVRAAARKLGRPDLRGSVVYASG 73 Query: 81 EPCTMCAAAISLARIRRLYYGASN 104 PC MC AA+++A ++ +YY N Sbjct: 74 HPCPMCLAAMTMAGVQAVYYAFDN 97 >gi|45185761|ref|NP_983477.1| ACR075Cp [Ashbya gossypii ATCC 10895] gi|44981516|gb|AAS51301.1| ACR075Cp [Ashbya gossypii ATCC 10895] Length = 245 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 9/113 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNR-NRELKDVTAHAEILAIRMGCR 64 M A+ A+ A E PV V V +++II+ N NR L + AHAE AI Sbjct: 8 MRTAIRLARYALDHGETPVACVFVHTPSDQIIAYGMNDTNRSLTGI-AHAEFGAIAQVQE 66 Query: 65 ILSQE---ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + ++ I EV +YVT+EPC MCA+A+ I R+ +G N + GG NG+ Sbjct: 67 LFGEQDASIFKEVTVYVTVEPCVMCASALKQLGIGRVIFGCGNERFGG--NGS 117 >gi|268589808|ref|ZP_06124029.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131] gi|291314796|gb|EFE55249.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131] Length = 157 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 6/127 (4%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V +N+++ N D T HAE+ IR C L E LY + EPC Sbjct: 29 PFGAVLVKDNQVVMTGENHIHTESDPTYHAELGLIRQYCSEHKIMNLSEYTLYTSCEPCC 88 Query: 85 MCAAAISLARIRRLYYGASNPK-----GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 MC+ A+ ++ R+ Y S+ + G I G+ A P + G+ ++++ Sbjct: 89 MCSGAMVWCQLGRMVYSLSHDELAEIAGFNIMLGSD-EIFAKSPFKPAVTHGVLKEKAML 147 Query: 140 IIQDFFK 146 I +F+ Sbjct: 148 IYTQYFQ 154 >gi|192360046|ref|YP_001980851.1| cytosine deaminase [Cellvibrio japonicus Ueda107] gi|190686211|gb|ACE83889.1| cytosine deaminase [Cellvibrio japonicus Ueda107] Length = 146 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ IP+G+V V++ +I+ R N+ + HAE+ + R+ Sbjct: 5 FMQAALEEARKGRREGGIPIGSVLVIDGRIVGRGHNQRVQKGSCVLHAEMDCLENAGRLK 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + LY TL PC MC+ + L I ++ G Sbjct: 65 ASD-YRRATLYSTLSPCDMCSGTVLLYGIPKVVVG 98 >gi|317486652|ref|ZP_07945469.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bilophila wadsworthia 3_1_6] gi|316922035|gb|EFV43304.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bilophila wadsworthia 3_1_6] Length = 116 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/59 (47%), Positives = 35/59 (59%) Query: 46 ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 E D TAHAEI+AIR + L Q L + +L+ T EPC C AA A I R+YYG + Sbjct: 4 ETLDPTAHAEIVAIRNATQKLGQLDLSDCELFTTCEPCPQCLAATYWAGISRIYYGITQ 62 >gi|325677177|ref|ZP_08156843.1| guanine deaminase [Rhodococcus equi ATCC 33707] gi|325551874|gb|EGD21570.1| guanine deaminase [Rhodococcus equi ATCC 33707] Length = 156 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 37/66 (56%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P AV V + ++++ + NR + D TAHAEILAIR C L E L +YV PC Sbjct: 21 PFAAVIVKDGEVLAESPNRVAQTGDPTAHAEILAIRQACTELGTEHLTGTTIYVLAHPCP 80 Query: 85 MCAAAI 90 MC ++ Sbjct: 81 MCLGSL 86 >gi|284054867|ref|ZP_06385077.1| tRNA-adenosine deaminase [Arthrospira platensis str. Paraca] Length = 87 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 1/77 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL+ A E+PVGA+ V K+I++ NR D TAHAEI+A+R +I Sbjct: 11 WMQQALKLGAAAGEAGEVPVGALIVNQQGKLIAQGENRRERDPDPTAHAEIIALRQASQI 70 Query: 66 LSQEILPEVDLYVTLEP 82 L L LYVTLEP Sbjct: 71 LGDWHLNTCTLYVTLEP 87 >gi|218516430|ref|ZP_03513270.1| putative purine deaminase protein [Rhizobium etli 8C-3] Length = 158 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 44/86 (51%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P G+V V N ++I RA N D+T HAE+ +++ + L + LY + EPC Sbjct: 26 PFGSVLVKNGEVILRAENSVFSGHDMTNHAEMNLVKLAAQHYDTAFLADCTLYTSTEPCA 85 Query: 85 MCAAAISLARIRRLYYGASNPKGGGI 110 MC+ AI + I + + S + G I Sbjct: 86 MCSGAIYWSGIGHMVFACSETRLGEI 111 >gi|19923945|ref|NP_612431.1| tRNA-specific adenosine deaminase-like protein 3 [Homo sapiens] gi|74731634|sp|Q96EY9|ADAT3_HUMAN RecName: Full=tRNA-specific adenosine deaminase-like protein 3; AltName: Full=tRNA-specific adenosine-34 deaminase subunit ADAT3 gi|15080093|gb|AAH11824.1| Adenosine deaminase, tRNA-specific 3, TAD3 homolog (S. cerevisiae) [Homo sapiens] Length = 351 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 5/71 (7%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGI 132 DLYVT EPC MCA A+ ARI R++YGA +P G GT+F + +H +++ G+ Sbjct: 283 DLYVTREPCAMCAMALVHARILRVFYGAPSPDGA---LGTRFRIHARPDLNHRFQVFRGV 339 Query: 133 SEQRSRQIIQD 143 E++ R + D Sbjct: 340 LEEQCRWLDPD 350 >gi|332851042|ref|XP_003316032.1| PREDICTED: tRNA-specific adenosine deaminase-like protein 3 [Pan troglodytes] Length = 367 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 5/71 (7%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGI 132 DLYVT EPC MCA A+ ARI R++YGA +P G GT+F + +H +++ G+ Sbjct: 299 DLYVTREPCAMCAMALVHARILRVFYGAPSPDGA---LGTRFRIHARPDLNHRFQVFRGV 355 Query: 133 SEQRSRQIIQD 143 E++ R + D Sbjct: 356 LEEQCRWLDPD 366 >gi|119589840|gb|EAW69434.1| hCG22695, isoform CRA_a [Homo sapiens] gi|119589842|gb|EAW69436.1| hCG22695, isoform CRA_a [Homo sapiens] gi|119589844|gb|EAW69438.1| hCG22695, isoform CRA_a [Homo sapiens] Length = 367 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 5/71 (7%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGI 132 DLYVT EPC MCA A+ ARI R++YGA +P G GT+F + +H +++ G+ Sbjct: 299 DLYVTREPCAMCAMALVHARILRVFYGAPSPDGA---LGTRFRIHARPDLNHRFQVFRGV 355 Query: 133 SEQRSRQIIQD 143 E++ R + D Sbjct: 356 LEEQCRWLDPD 366 >gi|190893255|ref|YP_001979797.1| purine deaminase [Rhizobium etli CIAT 652] gi|190698534|gb|ACE92619.1| putative purine deaminase protein [Rhizobium etli CIAT 652] Length = 158 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 44/86 (51%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P G+V V N ++I RA N D+T HAE+ +++ + L + LY + EPC Sbjct: 26 PFGSVLVKNGEVILRAENSVFSGHDMTNHAEMNLVKLAAQHYDTAFLADCTLYTSTEPCA 85 Query: 85 MCAAAISLARIRRLYYGASNPKGGGI 110 MC+ AI + I + + S + G I Sbjct: 86 MCSGAIYWSGIGHMVFACSETRLGEI 111 >gi|82701279|ref|YP_410845.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Nitrosospira multiformis ATCC 25196] gi|82409344|gb|ABB73453.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nitrosospira multiformis ATCC 25196] Length = 147 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 50/104 (48%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + F+ A+ A+N R P AV V+ + +S N + D T HAE+ A+R Sbjct: 1 MSQHETFLREAVRLAKNNRERGSRPFAAVLVVEGQAVSTGVNDVVQSNDPTTHAEMEAVR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 R L + L +Y + PC MC AA+ +A + +YY N Sbjct: 61 AASRKLGRPDLRGSIVYASGHPCPMCLAAMVIAGVDAVYYAFDN 104 >gi|210076069|ref|XP_505753.2| YALI0F22517p [Yarrowia lipolytica] gi|199424977|emb|CAG78564.2| YALI0F22517p [Yarrowia lipolytica] Length = 150 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 2/104 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M+ A+E+A + IP+GAV V + ++ + NR + H EI A++ R Sbjct: 8 YMAMAIEQATKSKNEGGIPIGAVLVAGDGTVLGKGHNRRIQHGSAVHHGEIDALQNAGR- 66 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 L+ ++ + +Y TL PC MC A + ++R+ G ++ GG Sbjct: 67 LAGKVYKDATMYTTLSPCDMCTGACIMFGVKRVVMGENDTFVGG 110 >gi|332285213|ref|YP_004417124.1| cytosine deaminase [Pusillimonas sp. T7-7] gi|330429166|gb|AEC20500.1| cytosine deaminase [Pusillimonas sp. T7-7] Length = 145 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 1/103 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA+ IP+G+V V II R NR + H E+ A+ R Sbjct: 4 FMKAAIQEARLGLQEGGIPIGSVLVHQGTIIGRGHNRRVQCGSTILHGEMDALENAGR-Q 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 + E LY TL PC MC AI L I ++ G + GG Sbjct: 63 PASVYRESVLYTTLSPCPMCTGAILLYGIPKVVIGENQTFMGG 105 >gi|114765713|ref|ZP_01444811.1| putative deaminase [Pelagibaca bermudensis HTCC2601] gi|114541930|gb|EAU44965.1| putative deaminase [Roseovarius sp. HTCC2601] Length = 152 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 4/123 (3%) Query: 22 NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E PV AVL +++++ + N E D + HAEI+AI R L L L ++ Sbjct: 25 GEGPVFTAAVLRGDEVLALSANEVSERCDASRHAEIVAIETASRKLGSTKLDGCTLIASM 84 Query: 81 EPCTMCAAAISLARIRRLYYGASN---PKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 +PC MC AA+ A I RL + + P N T C H+ + + G+ +R Sbjct: 85 QPCEMCLAAMRWAGIDRLVFAMTQELAPTFFQFPNLTIADYARACDHAFDWHGGLGAERL 144 Query: 138 RQI 140 QI Sbjct: 145 NQI 147 >gi|53804620|ref|YP_113769.1| cytosine deaminase [Methylococcus capsulatus str. Bath] gi|53758381|gb|AAU92672.1| cytosine deaminase [Methylococcus capsulatus str. Bath] Length = 145 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 18/125 (14%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 ++++ A+ EA+ IP+G+V V++ +I+ R NR + HAE+ + R Sbjct: 2 DIYLQAAIAEARKGLEEGGIPIGSVLVIDGEIVGRGRNRRVQKGSAILHAEMDCLENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + E LY TL PC MC+ AI L I R+ G EN T H Sbjct: 62 LSAAE-YRRATLYSTLSPCDMCSGAILLYGIPRVVAG---------ENRT--------FH 103 Query: 125 SPEIY 129 PE Y Sbjct: 104 GPETY 108 >gi|32455816|ref|NP_862468.1| hypothetical protein pADP-1_p031 [Pseudomonas sp. ADP] gi|13937453|gb|AAK50264.1|U66917_31 hypothetical protein [Pseudomonas sp. ADP] gi|12644709|gb|AAK00500.1| cytosine deaminase-like protein [Acidovorax citrulli] Length = 158 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 1/103 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A+EEA+ + L +P+G+V V K++SR N + HAE+ A+ R Sbjct: 10 MLQIAIEEAEASFLEGGLPIGSVLVHRGKLVSRGRNLRAQTGSTLHHAEMTALANAGR-Q 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 E E LY TL PC MC A+ L I ++ G + G Sbjct: 69 PPEFYRETVLYTTLSPCPMCTGAMILYGIPKVVIGTPTVREWG 111 >gi|261188372|ref|XP_002620601.1| cytosine deaminase [Ajellomyces dermatitidis SLH14081] gi|239593201|gb|EEQ75782.1| cytosine deaminase [Ajellomyces dermatitidis SLH14081] gi|239609343|gb|EEQ86330.1| cytosine deaminase [Ajellomyces dermatitidis ER-3] gi|327354444|gb|EGE83301.1| cytosine deaminase [Ajellomyces dermatitidis ATCC 18188] Length = 143 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 19/143 (13%) Query: 11 ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 ALEEA+ +A IP+GA V + KI+ R N + T H EI A+ R+ + Sbjct: 11 ALEEAKKSAAVGGIPIGACLVARDGKILGRGHNMRVQKGSATLHGEIAALENSGRLPAST 70 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTLATCHHS 125 + +Y T+ PC MC A L +++R+ G + GG I G + L Sbjct: 71 YVGAT-MYTTMSPCDMCTGACVLYKLKRVVVGENTTFMGGEQYLINRGVEVVVL------ 123 Query: 126 PEIYPGISEQRSRQIIQDFFKER 148 + +++Q F +ER Sbjct: 124 -------DNKECIEMVQKFIQER 139 >gi|83767797|dbj|BAE57936.1| unnamed protein product [Aspergillus oryzae] Length = 142 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 19/143 (13%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 ALEEA+ +P+GA V + KI+ R N + T HAE+ A+ R L Sbjct: 10 ALEEAKQGYAEGGVPIGAALVSKDGKILGRGHNMRVQKGSATLHAEMSALENSGR-LPAS 68 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----NGTQFYTLATCHHS 125 +Y TL PC MC A L +++R+ G + GG E G + L Sbjct: 69 AYEGATMYTTLSPCDMCTGACILYKVKRVVIGENKSFMGGEEYLKNRGKELVVL------ 122 Query: 126 PEIYPGISEQRSRQIIQDFFKER 148 + + +Q+++ F KE+ Sbjct: 123 -------NNEECKQLMEKFMKEK 138 >gi|289640846|ref|ZP_06473017.1| CMP/dCMP deaminase zinc-binding [Frankia symbiont of Datisca glomerata] gi|289509422|gb|EFD30350.1| CMP/dCMP deaminase zinc-binding [Frankia symbiont of Datisca glomerata] Length = 157 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 45/135 (33%), Positives = 64/135 (47%), Gaps = 7/135 (5%) Query: 1 MKKGNVFMSCALEEAQNAALRN----EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAE 55 M K +M ALE A+ AL + + PVGAV + + I+ A + + D TAHAE Sbjct: 1 MAKYEPWMRRALEMAR--ALPDPGAGDPPVGAVIYGPDGREITAAHHDRQRTADPTAHAE 58 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 I +R R L L L TLEP M A A+ LAR+ RL G+ + + G + + Sbjct: 59 ITVLRRAGRALGTWKLDGCTLVTTLEPGVMAAGAVVLARMPRLVIGSWDERNGAVCSQWD 118 Query: 116 FYTLATCHHSPEIYP 130 +H E+ P Sbjct: 119 LVRDPRLNHFVEVIP 133 >gi|146338815|ref|YP_001203863.1| putative cytidine and deoxycytidylate deaminase zinc-binding protein [Bradyrhizobium sp. ORS278] gi|146191621|emb|CAL75626.1| putative cytidine and deoxycytidylate deaminase zinc-binding protein [Bradyrhizobium sp. ORS278] Length = 139 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 1/80 (1%) Query: 25 PVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P A+ V + +++ A N +D TAHAE L CR ++ +I LY + EPC Sbjct: 7 PFAAILVDGDGRVLIEAENGYMPDRDATAHAERLVATQACRSIAPDIRATATLYSSAEPC 66 Query: 84 TMCAAAISLARIRRLYYGAS 103 MCA AI A I R+ YG S Sbjct: 67 AMCAGAIYWAGIGRVVYGLS 86 >gi|253989703|ref|YP_003041059.1| hypothetical protein PAU_02223 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781153|emb|CAQ84315.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 193 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 7/99 (7%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A+EEA+ +A + P GAV V + +I+SR N +K+ H EI AI Sbjct: 48 YMREAIEEAKKSA---KYPFGAVIVNRSSGEILSRG--VNSWVKNPILHGEIQAINHYVT 102 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + + V LY T EPC+MC +A++ IR + +G S Sbjct: 103 LYGNQGWNNVALYTTAEPCSMCMSALAWTGIREVIWGTS 141 >gi|238486578|ref|XP_002374527.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357] gi|317144152|ref|XP_001819938.2| cytosine deaminase [Aspergillus oryzae RIB40] gi|220699406|gb|EED55745.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357] Length = 148 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 19/143 (13%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 ALEEA+ +P+GA V + KI+ R N + T HAE+ A+ R L Sbjct: 10 ALEEAKQGYAEGGVPIGAALVSKDGKILGRGHNMRVQKGSATLHAEMSALENSGR-LPAS 68 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----NGTQFYTLATCHHS 125 +Y TL PC MC A L +++R+ G + GG E G + L Sbjct: 69 AYEGATMYTTLSPCDMCTGACILYKVKRVVIGENKSFMGGEEYLKNRGKELVVL------ 122 Query: 126 PEIYPGISEQRSRQIIQDFFKER 148 + + +Q+++ F KE+ Sbjct: 123 -------NNEECKQLMEKFMKEK 138 >gi|300175372|emb|CBK20683.2| unnamed protein product [Blastocystis hominis] Length = 155 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 12/144 (8%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAG-NRNRELKD------VTAHAEILAI 59 M A+E + AAL +PVG V + N I+ G NR D + +E + + Sbjct: 1 MRLAIELGRMAALNGNLPVGMVILDKNGNIMGECGDNRKNMFLDHCCFAGIRNQSERMNM 60 Query: 60 RMGCRILSQE---ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 ++G + S+E + + D+ +T EPC MC + +R+RR+ YG + + G + Sbjct: 61 QLGRKRASKEDPYLCTDYDIIITREPCIMCGMCLLHSRVRRVIYGCDD-RNGCFNSHIHL 119 Query: 117 YTLATCHHSPEIYPGISEQRSRQI 140 + +H ++ G+ E + RQ+ Sbjct: 120 HYKEPLNHHFRVFRGVMEAQCRQL 143 >gi|189220330|ref|YP_001940970.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4] gi|189187188|gb|ACD84373.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4] Length = 159 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 42/80 (52%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P G V VL ++I+ + NR L D TAHAEI A+R L + L LY+ + P Sbjct: 28 PFGPVVVLEDQIVGQGANRVTVLCDPTAHAEIEAMRQAAIKLGRFDLRGCLLYMNINPYP 87 Query: 85 MCAAAISLARIRRLYYGASN 104 MC A ARI+R+ G N Sbjct: 88 MCLTAAYWARIKRIVCGGPN 107 >gi|33595634|ref|NP_883277.1| hypothetical protein BPP0953 [Bordetella parapertussis 12822] gi|33600148|ref|NP_887708.1| hypothetical protein BB1162 [Bordetella bronchiseptica RB50] gi|33565712|emb|CAE40360.1| conserved hypothetical protein [Bordetella parapertussis] gi|33567746|emb|CAE31660.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 169 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 43/80 (53%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA+ + +++R NR D TAHAE+LA+R R L L +Y + +PC Sbjct: 37 PFGALVAKDGVVLARGVNRMLADHDPTAHAELLALREAGRALRSARLDGCVVYASGQPCP 96 Query: 85 MCAAAISLARIRRLYYGASN 104 MC AA+ ++ + R Y SN Sbjct: 97 MCLAAMRMSGVARAVYAYSN 116 >gi|52841362|ref|YP_095161.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54294070|ref|YP_126485.1| hypothetical protein lpl1134 [Legionella pneumophila str. Lens] gi|54297084|ref|YP_123453.1| hypothetical protein lpp1129 [Legionella pneumophila str. Paris] gi|52628473|gb|AAU27214.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750869|emb|CAH12280.1| hypothetical protein lpp1129 [Legionella pneumophila str. Paris] gi|53753902|emb|CAH15373.1| hypothetical protein lpl1134 [Legionella pneumophila str. Lens] Length = 154 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 40/76 (52%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P + V N KI++ A N + D TAHAE+ AIR+ L E L + D Y+ PC Sbjct: 21 PFACLIVQNGKILAEATNTVAQTHDPTAHAEVNAIRIATAKLGCEHLYDCDFYILAHPCP 80 Query: 85 MCAAAISLARIRRLYY 100 MC AA+ R++ + Sbjct: 81 MCLAAMYYCSPRKVIF 96 >gi|332295153|ref|YP_004437076.1| CMP/dCMP deaminase zinc-binding protein [Thermodesulfobium narugense DSM 14796] gi|332178256|gb|AEE13945.1| CMP/dCMP deaminase zinc-binding protein [Thermodesulfobium narugense DSM 14796] Length = 154 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 10/127 (7%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+P+GA+ I+S + N HAEILAI+ + ++ + +Y +LEP Sbjct: 21 ELPIGAIICKEGNILSMSQNFCERSNSPIEHAEILAIKKAIQRYNRWYIQGSTIYCSLEP 80 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCA AI +I+ + + S+ +N T+ + E++ ++R R +I+ Sbjct: 81 CLMCAGAIIECKIKNVIFCVSS------KNSTRQILESNDIFCIEMF----DERFRNLIE 130 Query: 143 DFFKERR 149 FFKE R Sbjct: 131 RFFKEIR 137 >gi|307609878|emb|CBW99403.1| hypothetical protein LPW_11791 [Legionella pneumophila 130b] Length = 154 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 40/76 (52%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P + V N KI++ A N + D TAHAE+ AIR+ L E L + D Y+ PC Sbjct: 21 PFACLIVQNGKILAEATNTVAQTHDPTAHAEVNAIRIATAKLGCEHLYDCDFYILAHPCP 80 Query: 85 MCAAAISLARIRRLYY 100 MC AA+ R++ + Sbjct: 81 MCLAAMYYCSPRKVIF 96 >gi|284167540|ref|YP_003405818.1| CMP/dCMP deaminase zinc-binding protein [Haloterrigena turkmenica DSM 5511] gi|284017195|gb|ADB63145.1| CMP/dCMP deaminase zinc-binding protein [Haloterrigena turkmenica DSM 5511] Length = 163 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 59/144 (40%), Gaps = 13/144 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A E A+ A R + P G V V ++ +I NR D+ H E+ CR L Sbjct: 24 MRRAFELAREAIDRGDRPFGTVLVRDDTVIMADSNRVVTEDDIRRHPELHLAYRACRELD 83 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + E +Y + EPC MCA + A R+ Y G + F S E Sbjct: 84 PDERAETVMYTSTEPCPMCAGGMISAGFGRVVYSV------GSDELPAFTDSEPAVRSAE 137 Query: 128 IYPGISE-------QRSRQIIQDF 144 I G+S+ + RQ+ +DF Sbjct: 138 ILDGVSDVTGPVLNEEGRQLHRDF 161 >gi|254820531|ref|ZP_05225532.1| cytidine/deoxycytidylate deaminase [Mycobacterium intracellulare ATCC 13950] Length = 166 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 36/66 (54%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P V V ++++ + NR + D TAHAEILAIR C L E L + +YV PC Sbjct: 22 PFATVIVRGGEVLAESANRVAQTNDPTAHAEILAIREACVKLGTEHLVDTTIYVLAHPCP 81 Query: 85 MCAAAI 90 MC ++ Sbjct: 82 MCLGSL 87 >gi|58271532|ref|XP_572922.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|134115302|ref|XP_773949.1| hypothetical protein CNBH4010 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256577|gb|EAL19302.1| hypothetical protein CNBH4010 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229181|gb|AAW45615.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21] Length = 224 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ---------EILPEVDLYVTLEPC 83 NN+++ N E+ D T H E+ AIR + ++ EI P+ +Y T EPC Sbjct: 65 NNELLCSGYNSQLEIGDPTEHGEVNAIRNCVKKYTELGWTPAQITEIWPQSWIYTTAEPC 124 Query: 84 TMCAAAISLARIRRLYYGASNPK 106 MC + I + +R+ YG S+P Sbjct: 125 PMCGSTILQSGFKRVVYGTSSPD 147 >gi|332255864|ref|XP_003277047.1| PREDICTED: tRNA-specific adenosine deaminase-like protein 3 [Nomascus leucogenys] Length = 367 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 5/71 (7%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGI 132 DLYVT EPC MCA + +RI R++YGAS+P G GT+F + +H +++ G+ Sbjct: 299 DLYVTREPCAMCAMGLVHSRILRVFYGASSPDGA---LGTRFRIHARPDLNHRFQVFRGV 355 Query: 133 SEQRSRQIIQD 143 E++ R + D Sbjct: 356 LEEQCRWLDPD 366 >gi|321254949|ref|XP_003193256.1| hypothetical protein CGB_D0460W [Cryptococcus gattii WM276] gi|317459726|gb|ADV21469.1| Hypothetical Protein CGB_D0460W [Cryptococcus gattii WM276] Length = 224 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 9/82 (10%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ---------EILPEVDLYVTLEPC 83 NN+++ N E+ D T H EI AIR + ++ EI P+ +Y T EPC Sbjct: 65 NNELLCSGYNSQLEIGDPTEHGEINAIRNCVKKYTELGWTPAQITEIWPQSWIYTTAEPC 124 Query: 84 TMCAAAISLARIRRLYYGASNP 105 MC + I + +R+ YG S+P Sbjct: 125 PMCGSTILQSGFKRVVYGTSSP 146 >gi|301098687|ref|XP_002898436.1| cytosine deaminase [Phytophthora infestans T30-4] gi|262105207|gb|EEY63259.1| cytosine deaminase [Phytophthora infestans T30-4] Length = 145 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A++EA+ IP+G+V +++KI +R NR + HAE+ + R+ Sbjct: 4 FLQAAIDEAKLGLSEGGIPIGSVLEIDDKIAARGHNRRVQRGSAVLHAEMDCLENAGRLT 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + LY TL PC MC+ A+ L +I + G Sbjct: 64 AAD-YARATLYSTLSPCDMCSGAVLLYKIPTIVVG 97 >gi|116694008|ref|YP_728219.1| putative cytosine/adenosine deaminase [Ralstonia eutropha H16] gi|113528507|emb|CAJ94854.1| Putative Cytosine/adenosine deaminase [Ralstonia eutropha H16] Length = 145 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 44/84 (52%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 R P GAV VL+ + ++ N D T HAE+ A+R R L + L +Y + Sbjct: 14 RGARPFGAVLVLDGEAVATGVNDIVHSHDPTTHAEMEAVRAAARKLGRPDLRGSVVYASG 73 Query: 81 EPCTMCAAAISLARIRRLYYGASN 104 PC MC AA+++A ++ +YY N Sbjct: 74 HPCPMCLAAMTMAGVQAVYYAFDN 97 >gi|71026495|ref|XP_762917.1| cytidine deaminase [Theileria parva strain Muguga] gi|68349869|gb|EAN30634.1| cytidine deaminase, putative [Theileria parva] Length = 153 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 20/120 (16%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM ALEEA+ A + E+ V + V ++++ + N + T H E+ AI + Sbjct: 12 FMKLALEEAKKALDKEEVAVACIIVSKATREVVASSSNATNLTYNSTWHCELEAIN---K 68 Query: 65 ILS---------------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 ++ +E L+VT EPC MC A+ L + +YYG N K GG Sbjct: 69 LIDMEPNGYKSQQDSGKLREFCSGFVLFVTCEPCIMCTTALQLIGLTEVYYGCKNEKFGG 128 >gi|220906017|ref|YP_002481328.1| CMP/dCMP deaminase [Cyanothece sp. PCC 7425] gi|219862628|gb|ACL42967.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7425] Length = 161 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 3/98 (3%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P G V + II+ NR D T H E+ AIR + L L LY + EPC Sbjct: 29 PFGCVIAKDGAIIAEGYNRVVAENDPTWHGEMAAIRQAAKQLQTFDLSGCVLYTSAEPCP 88 Query: 85 MCAAAISLARIRRLYYGA---SNPKGGGIENGTQFYTL 119 MCAAA AR+ R+ Y + K GG ++ + L Sbjct: 89 MCAAACWWARLDRIVYASRVEDALKYGGFDDREIYLDL 126 >gi|328777317|ref|XP_003249314.1| PREDICTED: tRNA-specific adenosine deaminase-like protein 3-like [Apis mellifera] Length = 389 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 41/68 (60%) Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136 ++ +EPC +CA A+ +RI R++YG SN G + T + + +H +++ G+ EQ Sbjct: 316 FLLMEPCPLCAMALLHSRILRIFYGISNKTTGVLGTKTILHAVPGLNHRYQVWSGVLEQE 375 Query: 137 SRQIIQDF 144 ++++QD Sbjct: 376 CQRVLQDI 383 >gi|300713101|ref|YP_003738913.1| Cytidine/deoxycytidylate deaminase, zinc-binding region (TBD) [Halalkalicoccus jeotgali B3] gi|299126785|gb|ADJ17122.1| Cytidine/deoxycytidylate deaminase, zinc-binding region (TBD) [Halalkalicoccus jeotgali B3] Length = 191 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 59/144 (40%), Gaps = 13/144 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M E AQ A R + P G+V V ++ II NR D+ H E+ CR Sbjct: 52 MRETFELAQEATARGDKPFGSVLVRDDTIIMSDSNREITEDDIRRHPELHLAYRACREYD 111 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + + +Y + PC MCA+ ++ A R+ Y G + F + S E Sbjct: 112 ADERAAMVMYTSTGPCPMCASGMATAGFGRVVYSV------GSDGIAVFTGIEPTVRSAE 165 Query: 128 IYPGISE-------QRSRQIIQDF 144 I GISE R+I Q+F Sbjct: 166 ILDGISEVVGPVLNDEGRRIHQEF 189 >gi|305664674|ref|YP_003860961.1| putative cytosine/adenosine deaminase [Maribacter sp. HTCC2170] gi|88707375|gb|EAQ99621.1| putative cytosine/adenosine deaminase [Maribacter sp. HTCC2170] Length = 154 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 4/121 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M+ ++ A+ A PVGA+ V ++I+ R KD+T HAEI AI+ Sbjct: 10 MVNHDFYMAKCIQLAEEAKQNGNTPVGALIVSKDEILGIGRENTRSKKDITRHAEIEAIQ 69 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L LY T EPC MC+ I I + +G + GG ++F L Sbjct: 70 NALKKVKS--LKGAILYTTHEPCVMCSYVIRHYEIGTVVFGLRSKYIGG--KSSEFNLLE 125 Query: 121 T 121 T Sbjct: 126 T 126 >gi|134115449|ref|XP_773438.1| hypothetical protein CNBI0520 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256064|gb|EAL18791.1| hypothetical protein CNBI0520 [Cryptococcus neoformans var. neoformans B-3501A] Length = 224 Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ---------EILPEVDLYVTLEPC 83 NN+++ N E+ D T H E+ AIR + ++ EI P+ +Y T EPC Sbjct: 65 NNELLCSGYNSQLEIGDPTEHGEVNAIRNCVKKYTELGWTPAQITEIWPQSWIYTTAEPC 124 Query: 84 TMCAAAISLARIRRLYYGASNPK 106 MC + I + +R+ YG S+P Sbjct: 125 PMCGSTILQSGFKRVIYGTSSPD 147 >gi|325110159|ref|YP_004271227.1| CMP/dCMP deaminase zinc-binding protein [Planctomyces brasiliensis DSM 5305] gi|324970427|gb|ADY61205.1| CMP/dCMP deaminase zinc-binding protein [Planctomyces brasiliensis DSM 5305] Length = 154 Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 6/86 (6%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD---LYVT 79 + P GAV + A NR ++ T H EI+AI S+E P+ + LY T Sbjct: 23 QFPFGAVITQSGSETILAEGWNRGSENPTWHGEIVAIN---DFFSREQQPDTESLTLYTT 79 Query: 80 LEPCTMCAAAISLARIRRLYYGASNP 105 EPC MC +AI A I R+ YG S P Sbjct: 80 AEPCPMCQSAIHWAGIDRVVYGTSIP 105 >gi|271966223|ref|YP_003340419.1| cytidine/deoxycytidylate deaminase [Streptosporangium roseum DSM 43021] gi|270509398|gb|ACZ87676.1| cytidine/deoxycytidylate deaminase [Streptosporangium roseum DSM 43021] Length = 167 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 36/66 (54%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P V V + +I++ + N+ + D TAHAEILAIR C L E L +YV PC Sbjct: 21 PFATVIVKDGEILAESANKVAQTSDPTAHAEILAIREACMRLGTEHLTGTTIYVLAHPCP 80 Query: 85 MCAAAI 90 MC ++ Sbjct: 81 MCLGSL 86 >gi|113968486|ref|YP_732279.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. MR-4] gi|113883170|gb|ABI37222.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. MR-4] Length = 157 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 1/76 (1%) Query: 24 IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 +P AV V + +I++ NR + L D TAHAEI AIR +L Q L + L + EP Sbjct: 25 LPFSAVIVDESGRIVAEGVNRVQALHDCTAHAEIQAIRKATLLLKQVSLEGMTLIASGEP 84 Query: 83 CTMCAAAISLARIRRL 98 C C AI LA+I R+ Sbjct: 85 CGFCYMAIQLAKISRV 100 >gi|217979127|ref|YP_002363274.1| CMP/dCMP deaminase zinc-binding [Methylocella silvestris BL2] gi|217504503|gb|ACK51912.1| CMP/dCMP deaminase zinc-binding [Methylocella silvestris BL2] Length = 145 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 46/97 (47%), Gaps = 4/97 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+EA + P GA+ + + I+ N D TAHAE++A+R Sbjct: 10 FMRAALKEAA----LGDFPFGALIAQDGETIATGRNLGETNDDPTAHAEMVALRGVIAAY 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L + LY T EPC MC AI + RL Y AS Sbjct: 66 GAARLRDSTLYATGEPCPMCMGAIIWCGVGRLVYAAS 102 >gi|239978013|ref|ZP_04700537.1| deaminase [Streptomyces albus J1074] gi|291449917|ref|ZP_06589307.1| deaminase [Streptomyces albus J1074] gi|291352866|gb|EFE79768.1| deaminase [Streptomyces albus J1074] Length = 168 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 48/97 (49%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A ++A P GA+ + +++ N+ D +AHAE+ AIR C+ L Sbjct: 18 WMEQAISLATDSARSGGGPFGALIAKDGLVVATGHNQVTASLDPSAHAEVSAIRAACKEL 77 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + L L + EPC MC + AR+ RL Y A Sbjct: 78 NTFSLAGCVLITSCEPCPMCLSTALWARVDRLVYAAD 114 >gi|332705458|ref|ZP_08425536.1| cytosine/adenosine deaminase [Lyngbya majuscula 3L] gi|332355818|gb|EGJ35280.1| cytosine/adenosine deaminase [Lyngbya majuscula 3L] Length = 147 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 60/138 (43%), Gaps = 12/138 (8%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-MGCRIL 66 M A +EAQ IP+G+V V +I+ R NR + H E+ A+ +G + Sbjct: 1 MLAAFKEAQMGFQEGGIPIGSVVVKGGEIVGRGHNRRVQKGSAILHGEMDALEDVGSQPA 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S +V LY TL PC+MC AI L +I + G EN T Sbjct: 61 S--FYQDVVLYTTLSPCSMCTGAILLYKIPHVVIG---------ENKTFLGEEELLRSRG 109 Query: 127 EIYPGISEQRSRQIIQDF 144 I +++ Q++QDF Sbjct: 110 VIVEVLNDDSCYQLMQDF 127 >gi|308497160|ref|XP_003110767.1| hypothetical protein CRE_04875 [Caenorhabditis remanei] gi|308242647|gb|EFO86599.1| hypothetical protein CRE_04875 [Caenorhabditis remanei] Length = 168 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 1/80 (1%) Query: 25 PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P GAV V ++++ N D T HAE+ AIR C+ L L LY + PC Sbjct: 36 PFGAVIVDKKGNVVAKGHNMVIVTNDPTMHAEMTAIRNACKALGTFDLSGHTLYTSCYPC 95 Query: 84 TMCAAAISLARIRRLYYGAS 103 MC A AR +YYGA+ Sbjct: 96 PMCMGASLWARFDAIYYGAT 115 >gi|149564876|ref|XP_001516821.1| PREDICTED: similar to hCG22695 [Ornithorhynchus anatinus] Length = 373 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 5/62 (8%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGI 132 DLYVT EPC MCA A+ +RI+R++YGAS+P G GT++ ++ +H E++ GI Sbjct: 295 DLYVTSEPCVMCAMALLHSRIQRVFYGASSPDGA---LGTRYKIHSKEDLNHHFEVFRGI 351 Query: 133 SE 134 E Sbjct: 352 LE 353 >gi|183984819|ref|YP_001853110.1| deaminase [Mycobacterium marinum M] gi|183178145|gb|ACC43255.1| deaminase [Mycobacterium marinum M] Length = 166 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 35/66 (53%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P V V + ++++ + N+ + D TAHAEILAIR C L E L YV PC Sbjct: 22 PFATVIVKDGQVLAESANKVAQTNDPTAHAEILAIRAACTKLGTEQLFGTTFYVLAHPCP 81 Query: 85 MCAAAI 90 MC ++ Sbjct: 82 MCLGSL 87 >gi|149236051|ref|XP_001523903.1| cytosine deaminase [Lodderomyces elongisporus NRRL YB-4239] gi|146452279|gb|EDK46535.1| cytosine deaminase [Lodderomyces elongisporus NRRL YB-4239] Length = 160 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 22/152 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 KKG M+ ALE+AQ + IP+G + + +++ R N+ + H E+ + Sbjct: 16 KKG---MAIALEQAQISYNEGGIPIGGCLIHKDGRVLGRGYNKRVQNGSPILHGEMSVLE 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----NGTQF 116 R L I + +Y TL PC MC AI L I+R+ G ++ GG E NG + Sbjct: 73 NAGR-LPHSIYKDCTMYTTLSPCNMCTGAILLYGIKRVVMGENDTFVGGEELLKQNGVEL 131 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 L ++ ++I+ F +E+ Sbjct: 132 VNL-------------QDEGCKEILTKFIQEK 150 >gi|148253573|ref|YP_001238158.1| putative cytidine/deoxycytidylate deaminase family protein [Bradyrhizobium sp. BTAi1] gi|146405746|gb|ABQ34252.1| Putative Cytidine/deoxycytidylate deaminase family protein [Bradyrhizobium sp. BTAi1] Length = 240 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 1/80 (1%) Query: 25 PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P AV V +++ A N +D TAHAE L C ++ +I LY + EPC Sbjct: 108 PFAAVLVDAGGRVLIEAENGYMPARDATAHAERLVATQACTSIAADIRATATLYSSAEPC 167 Query: 84 TMCAAAISLARIRRLYYGAS 103 MCA AI A I R+ YG S Sbjct: 168 AMCAGAIYWAGIGRVVYGLS 187 >gi|320167576|gb|EFW44475.1| tRNA-specific adenosine deaminase-like protein 3 [Capsaspora owczarzaki ATCC 30864] Length = 418 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 33/150 (22%) Query: 25 PVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV-------- 74 P+GAV V N I++ G+ +RE AHA ++AI QE L + Sbjct: 266 PIGAVVVDPATNTILASVGDCSRE--HTLAHAAMVAIARVADAQRQEYLAALQQGENGAP 323 Query: 75 ---------------------DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 DLY+T EPC MC+ A+ +R+ R+++G +P GG+ Sbjct: 324 ASAEAGNSRPVAELPYLCTSYDLYITREPCVMCSMALVHSRVGRVFFGTPHPDMGGLAGA 383 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 + + +H + G++E+R + D Sbjct: 384 RRIHAEPKLNHHFLAFRGVAERRCAALFCD 413 >gi|297275690|ref|XP_001096552.2| PREDICTED: tRNA-specific adenosine deaminase-like protein 3-like isoform 2 [Macaca mulatta] Length = 367 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 5/71 (7%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGI 132 DLYVT EPC MCA A+ +RI R++YGA +P G GT+F + +H +++ G+ Sbjct: 299 DLYVTREPCAMCAMALVHSRILRVFYGAPSPDGA---LGTRFRIHARPDLNHRFQVFRGV 355 Query: 133 SEQRSRQIIQD 143 E+ R + D Sbjct: 356 LEEECRWLDPD 366 >gi|55379804|ref|YP_137654.1| cytosine deaminase [Haloarcula marismortui ATCC 43049] gi|55232529|gb|AAV47948.1| cytosine deaminase [Haloarcula marismortui ATCC 43049] Length = 154 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 6/124 (4%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 A E A+ A R + P G+V V +N+++ A NR DV H E+ + + Sbjct: 18 AFELARTAVDRGDRPFGSVLVRDNEVVMEASNRVLTESDVRRHPELQLAHRAMQEFDPDE 77 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130 E +Y + EPC MCA + A + R+ Y + + G +F S EI Sbjct: 78 RAETVMYTSTEPCPMCAGGLRYAGLGRVVYSVGSDEMG------EFSGHEESVRSGEILA 131 Query: 131 GISE 134 GI++ Sbjct: 132 GITD 135 >gi|325662502|ref|ZP_08151105.1| hypothetical protein HMPREF0490_01845 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471198|gb|EGC74423.1| hypothetical protein HMPREF0490_01845 [Lachnospiraceae bacterium 4_1_37FAA] Length = 159 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 1/98 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++ A+E ++ A P GA+ V + +II GN K T HAE Sbjct: 8 YLRRAIEISKEARGAGNTPFGALLVNKDGEIIMEQGNIEITEKICTGHAEATLAARASHE 67 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 S+E L + LY T EPC MCA AI A I R+ YG + Sbjct: 68 YSKEYLWDCTLYTTAEPCAMCAGAIYWANIGRVVYGMT 105 >gi|156846411|ref|XP_001646093.1| hypothetical protein Kpol_543p65 [Vanderwaltozyma polyspora DSM 70294] gi|156116765|gb|EDO18235.1| hypothetical protein Kpol_543p65 [Vanderwaltozyma polyspora DSM 70294] Length = 268 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 12/115 (10%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL+ A++A E PV + V I+S N T+HAE +AI R Sbjct: 11 YMEYALKLARHALDHGETPVACIFVDKKTGGIVSYGMNDTNNSLAGTSHAEFVAID---R 67 Query: 65 ILSQ-----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 I +Q + ++ +YVT+EPC MCA+A+ I + +G N + GG NGT Sbjct: 68 IKNQFSSTFDKFEDIIVYVTVEPCIMCASALKQLGILNIVFGCGNERFGG--NGT 120 >gi|160897646|ref|YP_001563228.1| CMP/dCMP deaminase [Delftia acidovorans SPH-1] gi|160363230|gb|ABX34843.1| CMP/dCMP deaminase zinc-binding [Delftia acidovorans SPH-1] Length = 153 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 48/94 (51%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 A++ A + LR P GA+ +I+S N + D +AHAE+ A+R G R + Sbjct: 13 AVQLAHDNRLRGGRPFGALLAREGQILSTGVNEIVQSHDPSAHAEMQALRAGTRAQANPS 72 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L +Y + PC MC AA+ +A ++++ N Sbjct: 73 LAGCTIYASGHPCPMCLAALVMAGAEQVFFAFDN 106 >gi|240171878|ref|ZP_04750537.1| deaminase [Mycobacterium kansasii ATCC 12478] Length = 166 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 36/66 (54%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P V V + +I++ + N+ + D TAHAEILAIR C L E L +YV PC Sbjct: 22 PFATVIVKDGEILAESANKVAQTNDPTAHAEILAIREACTKLGTEHLVGTTIYVLAHPCP 81 Query: 85 MCAAAI 90 MC ++ Sbjct: 82 MCLGSL 87 >gi|257067316|ref|YP_003153571.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810] gi|256558134|gb|ACU83981.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810] Length = 175 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 3/96 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-VTAHAEILAIRMGCRI 65 F+S A+E+A+ + +P+GAV V + K+++ AG+ R KD H E I R Sbjct: 13 FLSLAIEQARKSWDEGGVPIGAVLVHDGKVLA-AGHNQRVQKDSAILHGETDTIEKAGR- 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 L + E LY TL PC MCA L I R+ G Sbjct: 71 LRASVYRESVLYTTLSPCIMCAGTALLYEIPRIVIG 106 >gi|307105321|gb|EFN53571.1| hypothetical protein CHLNCDRAFT_13956 [Chlorella variabilis] Length = 131 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 2/79 (2%) Query: 27 GAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 GAV V +++ N+ D T H E+ AIR C LP LY + +PC Sbjct: 7 GAVIVDKETGEVVGEGYNKVILHNDPTWHGEMEAIRKACAKRGSPHLPGTVLYTSAQPCP 66 Query: 85 MCAAAISLARIRRLYYGAS 103 MC+ AI AR+ +YYGA+ Sbjct: 67 MCSTAIMWARVDHVYYGAT 85 >gi|22298002|ref|NP_681249.1| cytosine deaminase [Thermosynechococcus elongatus BP-1] gi|22294180|dbj|BAC08011.1| cytosine deaminase [Thermosynechococcus elongatus BP-1] Length = 193 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 12/141 (8%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ A+ EA+ IP+G+V V + +II R N+ + HAEI + RI Sbjct: 48 FMAAAIAEAEQGLQEGGIPIGSVLVRHGQIIGRGHNQRVQRGSPILHAEIDCLANAGRIG 107 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + + LY TL PC +CA A+ I+++ G S G E + A H Sbjct: 108 RYD---DTVLYSTLMPCYLCAGAVVQFGIKKVIAGESQTFAGARE-----FMEA---HGV 156 Query: 127 EIYPGISEQRSRQIIQDFFKE 147 E+ ++ +R +Q+++DF + Sbjct: 157 EVID-LNLERCQQLMRDFIAQ 176 >gi|86749931|ref|YP_486427.1| twin-arginine translocation pathway signal [Rhodopseudomonas palustris HaA2] gi|86572959|gb|ABD07516.1| Twin-arginine translocation pathway signal [Rhodopseudomonas palustris HaA2] Length = 176 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 42/77 (54%) Query: 27 GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMC 86 GAV V + ++++ GN D +AHAE+ AIR C+ + L +Y + E C MC Sbjct: 48 GAVIVRDGEVLAATGNSVLRDNDPSAHAEVNAIRAACKKVGAPNLRGATMYTSCECCPMC 107 Query: 87 AAAISLARIRRLYYGAS 103 A AR+ R+++ AS Sbjct: 108 YATAYWARLDRIFFAAS 124 >gi|124486136|ref|YP_001030752.1| hypothetical protein Mlab_1318 [Methanocorpusculum labreanum Z] gi|124363677|gb|ABN07485.1| CMP/dCMP deaminase, zinc-binding protein [Methanocorpusculum labreanum Z] Length = 151 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 5/97 (5%) Query: 7 FMSCALEEAQNAALRNE--IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A EEA A RNE IP+GAV V N +I+ R N+ + + H E+ A+ R Sbjct: 8 YMRAAYEEA--LAGRNEGGIPIGAVLVRNGEIVGRGHNQRVQKGNPILHGEMDALSNSGR 65 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E LY TL PC MC+ AI L +I + G Sbjct: 66 -HPASFYKECTLYTTLAPCIMCSGAILLYKIPEVVVG 101 >gi|329890129|ref|ZP_08268472.1| guanine deaminase [Brevundimonas diminuta ATCC 11568] gi|328845430|gb|EGF94994.1| guanine deaminase [Brevundimonas diminuta ATCC 11568] Length = 150 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 4/97 (4%) Query: 12 LEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 L +A + AL N P GAV V + +I+ NR D ++HAE+ A+R L Sbjct: 10 LTQAVDLALENVRAGGRPFGAVLVKDGALIASGVNRMLATNDPSSHAEMEALRQAGPALG 69 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L LY + PC MC AA + R+ +YY SN Sbjct: 70 GVDLSGAVLYASGHPCPMCLAAAVMTRVSAVYYAFSN 106 >gi|6322425|ref|NP_012499.1| Tad2p [Saccharomyces cerevisiae S288c] gi|1352970|sp|P47058|TAD2_YEAST RecName: Full=tRNA-specific adenosine deaminase subunit TAD2; AltName: Full=tRNA-specific adenosine-34 deaminase subunit TAD2 gi|1008159|emb|CAA89326.1| unnamed protein product [Saccharomyces cerevisiae] gi|6434057|emb|CAB60629.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2 [Saccharomyces cerevisiae] gi|51013795|gb|AAT93191.1| YJL035C [Saccharomyces cerevisiae] gi|151945050|gb|EDN63301.1| tRNA-specific adenosine deaminase subunit [Saccharomyces cerevisiae YJM789] gi|285812866|tpg|DAA08764.1| TPA: Tad2p [Saccharomyces cerevisiae S288c] Length = 250 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 11/129 (8%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ A+ A +E PV + V ++++ N + AHAE + I + Sbjct: 7 MRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 66 Query: 66 LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L ++ ++ LYVT+EPC MCA+A+ I ++ +G N + GG NGT L+ Sbjct: 67 LGSRGVVDVFKDITLYVTVEPCIMCASALKQLDIGKVVFGCGNERFGG--NGT---VLSV 121 Query: 122 CHHSPEIYP 130 H + + P Sbjct: 122 NHDTCTLVP 130 >gi|307211478|gb|EFN87584.1| tRNA-specific adenosine deaminase-like protein 3 [Harpegnathos saltator] Length = 428 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 45/74 (60%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 +++ EPC +CA A+ +R+ R++YGA+NP+ G + + +T+ +H ++ GI E+ Sbjct: 353 VFLLTEPCPLCAMALLHSRVARVFYGAANPRVGVLGSRAILHTMPGLNHRYRVWSGILER 412 Query: 136 RSRQIIQDFFKERR 149 R++ ++ RR Sbjct: 413 ECRRVAEELDVRRR 426 >gi|256421680|ref|YP_003122333.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588] gi|256036588|gb|ACU60132.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588] Length = 131 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 2/104 (1%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74 A AA E PVG+V V + II ++++ KD+T HAE++AI R + + L Sbjct: 8 ADIAAKEGESPVGSVIVKDGIIIGEGSEKSKQQKDITRHAEVVAILDALR--NTDSLAGS 65 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LY +EPC +C+ I +I + + + + GG T Sbjct: 66 VLYTNVEPCLLCSYVIRHYKIAEVVFARHSGELGGTHQPFDLLT 109 >gi|325971024|ref|YP_004247215.1| CMP/dCMP deaminase zinc-binding protein [Spirochaeta sp. Buddy] gi|324026262|gb|ADY13021.1| CMP/dCMP deaminase zinc-binding protein [Spirochaeta sp. Buddy] Length = 156 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 1/94 (1%) Query: 11 ALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A+E+A+ L+N P GA+ V + A N D TAHAE+ IR C+ Sbjct: 10 AVEKARETMLQNLGGPFGALLVDTQGQVFVASNTVLGSNDPTAHAEVNVIRQVCKQKGTH 69 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L LY T PC MC +A A I+ +YYG + Sbjct: 70 DLQGCILYTTCYPCPMCLSACIWANIKEVYYGCT 103 >gi|260771105|ref|ZP_05880032.1| cytosine deaminase [Vibrio furnissii CIP 102972] gi|260613702|gb|EEX38894.1| cytosine deaminase [Vibrio furnissii CIP 102972] Length = 158 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 15 AQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73 A++A R P AV V N +I+ N D+T HAE L + ++ + L + Sbjct: 18 AEDAKSRGIHPFAAVLVDANGEILLEQINGYLPDLDMTGHAERLIMTQASKLYRPDFLNQ 77 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 LYV+ EPC MCA AI A + R+ YG S + Sbjct: 78 CTLYVSAEPCAMCAGAIYWAGVGRVVYGLSETR 110 >gi|316971942|gb|EFV55655.1| guanine deaminase [Trichinella spiralis] Length = 161 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 39/79 (49%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA+ V N ++++ N D TAHAE+ IR L L +LY + +PC Sbjct: 31 PFGALVVKNGRVLAIGHNEVLLTNDPTAHAEVTVIRRAAAALGHWNLAGCELYTSCKPCP 90 Query: 85 MCAAAISLARIRRLYYGAS 103 MC A + I ++YY S Sbjct: 91 MCLGAALWSGIEKIYYSLS 109 >gi|297191556|ref|ZP_06908954.1| deaminase [Streptomyces pristinaespiralis ATCC 25486] gi|197719293|gb|EDY63201.1| deaminase [Streptomyces pristinaespiralis ATCC 25486] Length = 167 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 41/76 (53%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA+ V + +I++ N+ D TAH E+ AIR GC+ L L L + EPC Sbjct: 35 PFGALIVKDGEIVAIGNNKVTSNLDPTAHGEVSAIRAGCQKLGTFSLEGCVLVTSCEPCP 94 Query: 85 MCAAAISLARIRRLYY 100 MC ++ AR+ R+ + Sbjct: 95 MCLSSALWARVDRIIF 110 >gi|73539205|ref|YP_299572.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Ralstonia eutropha JMP134] gi|72122542|gb|AAZ64728.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Ralstonia eutropha JMP134] Length = 152 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 48/98 (48%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+E A R P GAV ++ + ++ N D T HAE+ A+R R L Sbjct: 7 LMREAVELAVTNLRRGGRPFGAVLAIDGEAVATGVNDIVHSHDPTTHAEMEAVRAAARKL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 + L +Y + PC MC AA+++A ++ +YY N Sbjct: 67 GRPDLSGSVVYASGHPCPMCLAAMTMAGVQAVYYAFDN 104 >gi|312141603|ref|YP_004008939.1| cmp/dcmp deaminase [Rhodococcus equi 103S] gi|311890942|emb|CBH50261.1| CMP/dCMP deaminase [Rhodococcus equi 103S] Length = 156 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 36/66 (54%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P AV V + ++++ + NR + D TAHAEILAI C L E L +YV PC Sbjct: 21 PFAAVIVKDGEVLAESPNRVAQTGDPTAHAEILAISQACTELGTEHLTGTTIYVLAHPCP 80 Query: 85 MCAAAI 90 MC ++ Sbjct: 81 MCLGSL 86 >gi|119486672|ref|XP_001262322.1| hypothetical protein NFIA_028560 [Neosartorya fischeri NRRL 181] gi|119410479|gb|EAW20425.1| hypothetical protein NFIA_028560 [Neosartorya fischeri NRRL 181] Length = 106 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 45/78 (57%) Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + +L DLYVT+EPC MCA+A+ +IR +Y+G +N + GG + ++ T Sbjct: 7 KSLLRSTDLYVTVEPCVMCASALRQYQIRAVYFGCANDRFGGTGSILSLHSDFTIDPPYP 66 Query: 128 IYPGISEQRSRQIIQDFF 145 +Y G+ + + +++ F+ Sbjct: 67 VYGGLFRKEAIMLLRRFY 84 >gi|118616295|ref|YP_904627.1| hypothetical protein MUL_0449 [Mycobacterium ulcerans Agy99] gi|118568405|gb|ABL03156.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length = 102 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 33/62 (53%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P V V + ++++ + N+ + D TAHAEILAIR C L E L YV PC Sbjct: 22 PFATVIVKDGQVLAESANKVAQTNDPTAHAEILAIRAACTKLGTEQLFGTTFYVLAHPCP 81 Query: 85 MC 86 MC Sbjct: 82 MC 83 >gi|134094405|ref|YP_001099480.1| putative guanine deaminase [Herminiimonas arsenicoxydans] gi|133738308|emb|CAL61353.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) [Herminiimonas arsenicoxydans] Length = 153 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 47/94 (50%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 A++ AQ R P GAV ++N++I+ N D T HAE+ AIR + L + Sbjct: 12 AVQLAQENRERGGRPFGAVLAIDNEVIAVGVNNIVHSHDPTTHAEMEAIRSASQRLGRPN 71 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L +Y + PC MC AA+ L + +YY N Sbjct: 72 LKGSVIYASGHPCPMCLAAMVLTGVDAVYYAFDN 105 >gi|315179290|gb|ADT86204.1| zinc-binding domain protein [Vibrio furnissii NCTC 11218] Length = 158 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 15 AQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73 A++A R P AV V N +I+ N D+T HAE L + ++ + L + Sbjct: 18 AEDAKSRGIHPFAAVLVDANGEILLEQINGYLPDLDMTGHAERLIMTQASKLYRPDFLNQ 77 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 LYV+ EPC MCA AI A + R+ YG S + Sbjct: 78 CTLYVSAEPCAMCAGAIYWAGVGRVVYGLSETR 110 >gi|242011321|ref|XP_002426401.1| cytidine and deoxycytidylate deaminase zinc-binding region, putative [Pediculus humanus corporis] gi|212510500|gb|EEB13663.1| cytidine and deoxycytidylate deaminase zinc-binding region, putative [Pediculus humanus corporis] Length = 359 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 34/55 (61%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 DLYV EPC MCA ++ +RI+R+++ NP+ G + + +T+ +H E++ Sbjct: 298 DLYVAKEPCVMCAMSLVHSRIKRVFFHVRNPERGALASACHVHTIKDLNHHYEVF 352 >gi|115388491|ref|XP_001211751.1| cytosine deaminase [Aspergillus terreus NIH2624] gi|114195835|gb|EAU37535.1| cytosine deaminase [Aspergillus terreus NIH2624] Length = 148 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 60/143 (41%), Gaps = 19/143 (13%) Query: 11 ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A+EEA+ A +P+GA V + KI+ R N + T HAE+ A+ R L Sbjct: 10 AVEEAKKGAAEGGVPIGAALVSKDGKILGRGHNMRVQKGSATLHAEMAALENSGR-LPAS 68 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----NGTQFYTLATCHHS 125 +Y TL PC MC A L +I R+ G + GG E G + L Sbjct: 69 AYAGATMYTTLSPCDMCTGACILYKINRVVIGENQNFLGGEELLLNKGKEVVVL------ 122 Query: 126 PEIYPGISEQRSRQIIQDFFKER 148 +Q+++ F KE+ Sbjct: 123 -------DHAECKQLMETFIKEK 138 >gi|162147221|ref|YP_001601682.1| cytidine deaminase [Gluconacetobacter diazotrophicus PAl 5] gi|209544272|ref|YP_002276501.1| CMP/dCMP deaminase [Gluconacetobacter diazotrophicus PAl 5] gi|161785798|emb|CAP55369.1| putative cytidine deaminase [Gluconacetobacter diazotrophicus PAl 5] gi|209531949|gb|ACI51886.1| CMP/dCMP deaminase zinc-binding [Gluconacetobacter diazotrophicus PAl 5] Length = 168 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Query: 29 VAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCA 87 VA +++S A N + + D T HAE+ A+ RIL + + + LY + EPC MCA Sbjct: 35 VADAQGRVVSTAINNSMPPEGDPTQHAELRAVAGAARILPPDAMADCTLYTSAEPCCMCA 94 Query: 88 AAISLARIRRLYYGAS 103 A+ IRR+ Y S Sbjct: 95 GAVYWTNIRRVVYALS 110 >gi|190409464|gb|EDV12729.1| tRNA-specific adenosine deaminase 2 [Saccharomyces cerevisiae RM11-1a] Length = 250 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 17/153 (11%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ A+ A +E PV + V ++++ N + AHAE + I + Sbjct: 7 MRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 66 Query: 66 LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTLA 120 L ++ ++ LYVT+EPC MCA+A+ I ++ +G N + GG NGT Sbjct: 67 LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGG--NGTVLSVNHD 124 Query: 121 TCHHSP--------EIYPGISEQRSRQIIQDFF 145 TC P E PGI + + +++ F+ Sbjct: 125 TCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 157 >gi|323333035|gb|EGA74437.1| Tad2p [Saccharomyces cerevisiae AWRI796] Length = 244 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 17/153 (11%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ A+ A +E PV + V ++++ N + AHAE + I + Sbjct: 1 MRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 60 Query: 66 LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTLA 120 L ++ ++ LYVT+EPC MCA+A+ I ++ +G N + GG NGT Sbjct: 61 LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGG--NGTVLSVNHD 118 Query: 121 TCHHSP--------EIYPGISEQRSRQIIQDFF 145 TC P E PGI + + +++ F+ Sbjct: 119 TCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 151 >gi|255935941|ref|XP_002558997.1| Pc13g05630 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583617|emb|CAP91632.1| Pc13g05630 [Penicillium chrysogenum Wisconsin 54-1255] Length = 165 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 16/97 (16%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRA---GNRNRELKDVTAHAEILAI 59 K FM AL + A E PVG V V N++I+ NR+ +K + +H Sbjct: 12 KHGYFMKQALLMGEKAIQSGETPVGCVLVHNDQIVGYGMNDTNRSMNVKMLQSHP----- 66 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96 + L DLYVT+EPC MCA+A+ RIR Sbjct: 67 --------RSALQSTDLYVTVEPCVMCASALKQYRIR 95 >gi|325964826|ref|YP_004242732.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans Sphe3] gi|323470913|gb|ADX74598.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans Sphe3] Length = 164 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 3/102 (2%) Query: 10 CALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A + AQ +A IP+GA +I+ N + D AH E+ A+R R Q+ Sbjct: 23 AAYQAAQKSAGEGGIPIGAALARGGVVIAAGHNERVQKGDPIAHGEMSALRAAGR---QK 79 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 + LY TL PC MC I +I R+ G + GG E Sbjct: 80 SYRDTTLYTTLAPCAMCTGTIIQFKIPRVVVGEARTFGGEFE 121 >gi|207343953|gb|EDZ71253.1| YJL035Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 250 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 11/129 (8%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ A+ A +E PV + V ++++ N + AHAE + I + Sbjct: 7 MRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 66 Query: 66 LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L ++ ++ LYVT+EPC MCA+A+ I ++ +G N + GG NGT L+ Sbjct: 67 LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGG--NGT---VLSV 121 Query: 122 CHHSPEIYP 130 H + + P Sbjct: 122 NHDTCTLVP 130 >gi|183222799|ref|YP_001840795.1| putative cytidine/adenosine deaminase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912831|ref|YP_001964386.1| cytosine/adenosine deaminase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777507|gb|ABZ95808.1| Cytosine/adenosine deaminase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781221|gb|ABZ99519.1| Putative cytidine/adenosine deaminase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 146 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 3/130 (2%) Query: 21 RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 +NEIP + + ++S + N + + T H+EILAI + L E L Sbjct: 19 KNEIPSYSEIITKDGNLVSSSFNSVEQTLNPTKHSEILAIEKALSHVDGRYLSEHILITA 78 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC +CA A+ ++ + Y G GI + T ++ +H P+ I E R + Sbjct: 79 LEPCILCAGAVVRVKLPEVVYFLPAKPGEGISSYTT-ESIYLLNHFPKC-TLIPESRIKF 136 Query: 140 IIQDFFKERR 149 FFKE+R Sbjct: 137 EFLSFFKEKR 146 >gi|118591858|ref|ZP_01549253.1| putative deaminase [Stappia aggregata IAM 12614] gi|118435501|gb|EAV42147.1| putative deaminase [Stappia aggregata IAM 12614] Length = 155 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/81 (39%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Query: 24 IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 IP A V N +I+ R NR RE D TAHAE+ AIR CR L L + EP Sbjct: 17 IPFTAFVVDRNGEILGRGVNRVREYHDPTAHAEVEAIRDACRTHGTVHLHGATLLASGEP 76 Query: 83 CTMCAAAISLARIRRLYYGAS 103 C MC + A + R+ + A Sbjct: 77 CAMCYMSALDAGVSRILFAAD 97 >gi|154505762|ref|ZP_02042500.1| hypothetical protein RUMGNA_03302 [Ruminococcus gnavus ATCC 29149] gi|153793780|gb|EDN76200.1| hypothetical protein RUMGNA_03302 [Ruminococcus gnavus ATCC 29149] Length = 159 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 46/98 (46%), Gaps = 1/98 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++ A+E ++ A P GA+ V +II GN K T HAE Sbjct: 8 YLRRAIEISKEAREAGNTPFGALLVNKEGEIIMEQGNIEITEKICTGHAEATLAARASHE 67 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 S+E L + LY T EPC MCA AI A I R+ YG + Sbjct: 68 YSREFLWDCTLYTTAEPCAMCAGAIYWANIGRVVYGMT 105 >gi|323306816|gb|EGA60101.1| Fcy1p [Saccharomyces cerevisiae FostersO] Length = 158 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 15/145 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A EEA +P+G ++NNK ++ R N + T H EI + C Sbjct: 15 MDIAYEEAALGYKEGGVPIGG-CLINNKDGSVLGRGHNMRFQKGSATLHGEISTLE-NCG 72 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATCH 123 L ++ + LY TL PC MC AI + I R G + N K G ++ L T Sbjct: 73 RLEGKVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENXNFK----SKGEKY--LQTRG 126 Query: 124 HSPEIYPGISEQRSRQIIQDFFKER 148 H + + ++R ++I++ F ER Sbjct: 127 HEVVV---VDDERCKKIMKQFIDER 148 >gi|34810531|pdb|1P6O|A Chain A, The Crystal Structure Of Yeast Cytosine Deaminase Bound To 4(R)-Hydroxyl-3,4-Dihydropyrimidine At 1.14 Angstroms. gi|34810532|pdb|1P6O|B Chain B, The Crystal Structure Of Yeast Cytosine Deaminase Bound To 4(R)-Hydroxyl-3,4-Dihydropyrimidine At 1.14 Angstroms. gi|46015452|pdb|1RB7|A Chain A, Yeast Cytosine Deaminase Crystal Form P212121 With Sodium Acetate. gi|46015453|pdb|1RB7|B Chain B, Yeast Cytosine Deaminase Crystal Form P212121 With Sodium Acetate Length = 161 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 15/145 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A EEA +P+G ++NNK ++ R N + T H EI + C Sbjct: 18 MDIAYEEAALGYKEGGVPIGG-CLINNKDGSVLGRGHNMRFQKGSATLHGEISTLE-NCG 75 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATCH 123 L ++ + LY TL PC MC AI + I R G + N K G ++ L T Sbjct: 76 RLEGKVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFK----SKGEKY--LQTRG 129 Query: 124 HSPEIYPGISEQRSRQIIQDFFKER 148 H + + ++R ++I++ F ER Sbjct: 130 HEVVV---VDDERCKKIMKQFIDER 151 >gi|323304324|gb|EGA58097.1| Tad2p [Saccharomyces cerevisiae FostersB] Length = 242 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 17/153 (11%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ A+ A +E PV + V ++++ N + AHAE + I + Sbjct: 7 MRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 66 Query: 66 LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTLA 120 L ++ ++ LYVT+EPC MCA+A+ I ++ +G N + GG NGT Sbjct: 67 LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGG--NGTVLSVNHD 124 Query: 121 TCHHSP--------EIYPGISEQRSRQIIQDFF 145 TC P E PGI + + +++ F+ Sbjct: 125 TCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 157 >gi|71415321|ref|XP_809731.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70874158|gb|EAN87880.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 384 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 37/57 (64%) Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 E+DL+V+ EPC MC+ A+ +R+RR++Y +NP GG+ + +T+ +H ++ Sbjct: 296 EIDLFVSHEPCVMCSMALVHSRVRRVFYCFANPTHGGLGSVFSIHTIPLLNHHFRVF 352 >gi|6325319|ref|NP_015387.1| Fcy1p [Saccharomyces cerevisiae S288c] gi|2493561|sp|Q12178|FCY1_YEAST RecName: Full=Cytosine deaminase; AltName: Full=Cytosine aminohydrolase gi|30750134|pdb|1UAQ|A Chain A, The Crystal Structure Of Yeast Cytosine Deaminase gi|30750135|pdb|1UAQ|B Chain B, The Crystal Structure Of Yeast Cytosine Deaminase gi|805042|emb|CAA89179.1| unknown [Saccharomyces cerevisiae] gi|1314130|emb|CAA95006.1| unknown [Saccharomyces cerevisiae] gi|1762322|gb|AAC13409.1| cytosine deaminase [Saccharomyces cerevisiae] gi|2343114|gb|AAB67713.1| cytosine deaminase [Saccharomyces cerevisiae] gi|151942846|gb|EDN61192.1| cytosine deaminase [Saccharomyces cerevisiae YJM789] gi|190407999|gb|EDV11264.1| cytosine deaminase [Saccharomyces cerevisiae RM11-1a] gi|256268919|gb|EEU04266.1| Fcy1p [Saccharomyces cerevisiae JAY291] gi|259150215|emb|CAY87018.1| Fcy1p [Saccharomyces cerevisiae EC1118] gi|285815591|tpg|DAA11483.1| TPA: Fcy1p [Saccharomyces cerevisiae S288c] gi|323302562|gb|EGA56369.1| Fcy1p [Saccharomyces cerevisiae FostersB] gi|323335147|gb|EGA76437.1| Fcy1p [Saccharomyces cerevisiae Vin13] gi|323346295|gb|EGA80585.1| Fcy1p [Saccharomyces cerevisiae Lalvin QA23] gi|323350206|gb|EGA84353.1| Fcy1p [Saccharomyces cerevisiae VL3] Length = 158 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 15/145 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A EEA +P+G ++NNK ++ R N + T H EI + C Sbjct: 15 MDIAYEEAALGYKEGGVPIGG-CLINNKDGSVLGRGHNMRFQKGSATLHGEISTLE-NCG 72 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATCH 123 L ++ + LY TL PC MC AI + I R G + N K G ++ L T Sbjct: 73 RLEGKVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFK----SKGEKY--LQTRG 126 Query: 124 HSPEIYPGISEQRSRQIIQDFFKER 148 H + + ++R ++I++ F ER Sbjct: 127 HEVVV---VDDERCKKIMKQFIDER 148 >gi|323308420|gb|EGA61665.1| Tad2p [Saccharomyces cerevisiae FostersO] gi|323354467|gb|EGA86306.1| Tad2p [Saccharomyces cerevisiae VL3] Length = 244 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 11/129 (8%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ A+ A +E PV + V ++++ N + AHAE + I + Sbjct: 1 MRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 60 Query: 66 LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L ++ ++ LYVT+EPC MCA+A+ I ++ +G N + GG NGT L+ Sbjct: 61 LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGG--NGT---VLSV 115 Query: 122 CHHSPEIYP 130 H + + P Sbjct: 116 NHDTCTLVP 124 >gi|317509467|ref|ZP_07967084.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Segniliparus rugosus ATCC BAA-974] gi|316252241|gb|EFV11694.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Segniliparus rugosus ATCC BAA-974] Length = 167 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 36/66 (54%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P V V + +I++ + N+ + D TAHAEILAIR C L E L +YV PC Sbjct: 21 PFATVIVRDGEILAESANKVAQTGDPTAHAEILAIREACAKLGTEHLVGATIYVLAHPCP 80 Query: 85 MCAAAI 90 MC ++ Sbjct: 81 MCLGSL 86 >gi|242802981|ref|XP_002484082.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500] gi|218717427|gb|EED16848.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500] Length = 148 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 2/102 (1%) Query: 11 ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A+EEA+ +P+GA V + KI+ R N + T H EI A+ R L Sbjct: 10 AVEEARQGQAEGGVPIGACLVSKDGKILGRGHNMRFQKGSATLHGEISALENSGR-LPAS 68 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 +Y TL PC MC A L +++R+ G +N GG E Sbjct: 69 AYEGATMYTTLSPCDMCTGACILYKVKRVVVGENNNFLGGEE 110 >gi|194212402|ref|XP_001914792.1| PREDICTED: similar to hCG22695 [Equus caballus] Length = 371 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 12/101 (11%) Query: 54 AEILAIRMG-CRILSQEI------LPEV----DLYVTLEPCTMCAAAISLARIRRLYYGA 102 A A+R+G R L +++ LP V DLYVT EPC MCA A+ +R++R++YGA Sbjct: 271 ASAQAVRVGSVRKLDEDVDTDEDGLPYVCTGYDLYVTREPCAMCAMALVHSRVQRVFYGA 330 Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 +P G + + + +H +++ G+ E R++ D Sbjct: 331 PSPD-GALGTRLRLHARPDLNHRFQVFRGVLEAACRRLDPD 370 >gi|33593821|ref|NP_881465.1| hypothetical protein BP2880 [Bordetella pertussis Tohama I] gi|33563894|emb|CAE43152.1| conserved hypothetical protein [Bordetella pertussis Tohama I] gi|332383223|gb|AEE68070.1| hypothetical protein BPTD_2832 [Bordetella pertussis CS] Length = 169 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 42/80 (52%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA+ + +++R NR D TAH E+LA+R R L L +Y + +PC Sbjct: 37 PFGALVAKDGVVLARGVNRMLADHDPTAHTELLALREAGRALRSARLDGCVVYASGQPCP 96 Query: 85 MCAAAISLARIRRLYYGASN 104 MC AA+ ++ + R Y SN Sbjct: 97 MCLAAMRMSGVARAVYAYSN 116 >gi|229492959|ref|ZP_04386754.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis SK121] gi|229319989|gb|EEN85815.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis SK121] Length = 166 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 3/106 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 ++ AL+ A+ E+P+GAV +++++ RA + R L HA++ A+ L Sbjct: 9 LAVALDVAREGMELGEMPIGAVVFDDDRVLGRAYTQERALGRRVVHADLQALLQADEALG 68 Query: 68 -QEILPEVDLYVTLEPCTMC-AAAISLARIRRLYYGASNPKGGGIE 111 E+ L V LEPC MC AAI+L + R+++ +P G E Sbjct: 69 FTRASGELTLAVNLEPCLMCMGAAITLG-VTRVWFALESPNDGAAE 113 >gi|311248289|ref|XP_003123051.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-specific adenosine deaminase-like protein 3-like [Sus scrofa] Length = 351 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 20/121 (16%) Query: 40 AGNRNRELKDVTAH--------AEILAIRMG-CRILSQEI--LPEV----DLYVTLEPCT 84 A + R D+T H A ++R+G R L +++ LP V DLYVT EPC Sbjct: 233 AQGQGRGTYDLTHHPACSFAPAAAPESVRVGSVRKLEEDMDGLPYVCTGYDLYVTREPCA 292 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGISEQRSRQIIQ 142 MCA A+ +R+RR++YGA +P G GT F + +H + + G+ E + Q+ Sbjct: 293 MCAMALVHSRVRRVFYGAPSPDGA---LGTHFRIHARPDLNHRFQAFRGVLEAQCCQLDP 349 Query: 143 D 143 D Sbjct: 350 D 350 >gi|126644134|ref|XP_001388203.1| cytidine and deoxycytidylate deaminase family [Cryptosporidium parvum Iowa II] gi|126117276|gb|EAZ51376.1| cytidine and deoxycytidylate deaminase family, putative [Cryptosporidium parvum Iowa II] Length = 186 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 33/162 (20%) Query: 15 AQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILA-------------- 58 ++ A NE+PVG V V +I S A N ++ T H EI+A Sbjct: 1 SEFAVKSNEVPVGCVIVNRTTKEIESEAHNETNISRNGTRHCEIVALEKLIVKLKSTSGK 60 Query: 59 IRMGCRILSQEI-----------LPEV-DLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 I R+++Q L ++ DL+VT+EPC MC I I ++YG N + Sbjct: 61 INNSTRLITQNQDEYSNTRFRINLGDIYDLFVTVEPCIMCIGFIDQMGIHNIFYGCKNYR 120 Query: 107 GGGIENGTQFYTLATCHHSPEIY--PGISEQRSRQIIQDFFK 146 GG + ++ L + S +I GI E S +I+++F++ Sbjct: 121 FGGCGSVLDYHHL---NKSSKIILTSGICENESIKILKEFYE 159 >gi|318042353|ref|ZP_07974309.1| putative cytosine deaminase [Synechococcus sp. CB0101] Length = 144 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 4/96 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A +EAQ + + IP+GAV A + I++R N+ + D T+H E IR R Sbjct: 4 LMDAARQEAQQSWMEGGIPIGAVLAREDGTIVARGHNQRVQNGDPTSHGETQCIRNAGR- 62 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + ++ L TL PC MCA L RR+ G Sbjct: 63 --RRDWRDLTLVTTLSPCPMCAGTAVLLGFRRVLIG 96 >gi|281347275|gb|EFB22859.1| hypothetical protein PANDA_015525 [Ailuropoda melanoleuca] Length = 353 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 5/68 (7%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGI 132 DLYVT EPC MCA A+ +R++R++YGA +P G GT+F + +H +++ G+ Sbjct: 287 DLYVTHEPCAMCAMALVHSRVQRVFYGAPSPDGA---LGTRFRIHARPDLNHRFQVFRGV 343 Query: 133 SEQRSRQI 140 E + R++ Sbjct: 344 LEAQCRRL 351 >gi|301781056|ref|XP_002925950.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-specific adenosine deaminase-like protein 3-like [Ailuropoda melanoleuca] Length = 371 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 5/68 (7%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGI 132 DLYVT EPC MCA A+ +R++R++YGA +P G GT+F + +H +++ G+ Sbjct: 303 DLYVTHEPCAMCAMALVHSRVQRVFYGAPSPDGA---LGTRFRIHARPDLNHRFQVFRGV 359 Query: 133 SEQRSRQI 140 E + R++ Sbjct: 360 LEAQCRRL 367 >gi|320333701|ref|YP_004170412.1| CMP/dCMP deaminase zinc-binding protein [Deinococcus maricopensis DSM 21211] gi|319754990|gb|ADV66747.1| CMP/dCMP deaminase zinc-binding protein [Deinococcus maricopensis DSM 21211] Length = 184 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 13/111 (11%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELK------DVT-AHAEI-L 57 ++ L A+ A + PVGAV V + II+R NR E + D + AHAE+ L Sbjct: 6 YLQETLRLAREAQTQGSAPVGAVLVNEHGDIIARGRNRVGEAQTPQHVGDASVAHAEMDL 65 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 ++G Q + LY +LEPC MC A +L +RR+ + +P GG Sbjct: 66 YFQIGKLKDPQHLT----LYTSLEPCLMCGGASALLGVRRIVWATDDPWGG 112 >gi|323331315|gb|EGA72733.1| Fcy1p [Saccharomyces cerevisiae AWRI796] Length = 153 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 15/145 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A EEA +P+G ++NNK ++ R N + T H EI + C Sbjct: 10 MDIAYEEAALGYKEGGVPIGG-CLINNKDGSVLGRGHNMRFQKGSATLHGEISTLE-NCG 67 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATCH 123 L ++ + LY TL PC MC AI + I R G + N K G ++ L T Sbjct: 68 RLEGKVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFK----SKGEKY--LQTRG 121 Query: 124 HSPEIYPGISEQRSRQIIQDFFKER 148 H + + ++R ++I++ F ER Sbjct: 122 HEVVV---VDDERCKKIMKQFIDER 143 >gi|87307959|ref|ZP_01090102.1| cytosine deaminase [Blastopirellula marina DSM 3645] gi|87289573|gb|EAQ81464.1| cytosine deaminase [Blastopirellula marina DSM 3645] Length = 145 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A+EEA+ IP+G+V V++ ++ + NR + HAE+ + R+ Sbjct: 4 FLKLAIEEARKGLAEGGIPIGSVLVVDGQVRGQGHNRRVQKGSAILHAEMDCLEAAGRLT 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 +++ V LY TL PC MC+ L +I ++ G Sbjct: 64 AKDYQRAV-LYSTLSPCDMCSGTALLYKIPKIVIG 97 >gi|328876514|gb|EGG24877.1| cytidine deaminase-like protein [Dictyostelium fasciculatum] Length = 504 Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 40/65 (61%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 LY++ EPC MC+ A+ +RI R+ YG+ GGG+ + + +T + +H ++Y G+ E+ Sbjct: 390 LYLSREPCVMCSMALVHSRIERVIYGSQQHNGGGLGSCFRIHTEKSVNHKFQVYRGLMEK 449 Query: 136 RSRQI 140 ++ Sbjct: 450 ECLEL 454 >gi|291244537|ref|XP_002742156.1| PREDICTED: tRNA-specific adenosine deaminase 3-like [Saccoglossus kowalevskii] Length = 381 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134 DLY+T EPC MCA A+ +RI R++YG P G + + + +T + +H E++ GI E Sbjct: 314 DLYITHEPCIMCAMALVHSRINRVFYGIMCPN-GALGSRYKIHTQSGLNHHFEVFKGILE 372 Query: 135 QRSRQIIQ 142 Q+++ Sbjct: 373 LDCNQLLK 380 >gi|225387920|ref|ZP_03757684.1| hypothetical protein CLOSTASPAR_01690 [Clostridium asparagiforme DSM 15981] gi|225045989|gb|EEG56235.1| hypothetical protein CLOSTASPAR_01690 [Clostridium asparagiforme DSM 15981] Length = 161 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 1/80 (1%) Query: 25 PVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P GA+ A I+ N K T HAE A ++ S+E L + LY T EPC Sbjct: 27 PFGALLADKEGNILLEQPNVEITEKKCTGHAETQAAERASQLYSREFLKDCTLYTTAEPC 86 Query: 84 TMCAAAISLARIRRLYYGAS 103 MCA AI A I R+ YG + Sbjct: 87 AMCAGAIYWAGIGRVVYGMT 106 >gi|269119566|ref|YP_003307743.1| CMP/dCMP deaminase zinc-binding protein [Sebaldella termitidis ATCC 33386] gi|268613444|gb|ACZ07812.1| CMP/dCMP deaminase zinc-binding protein [Sebaldella termitidis ATCC 33386] Length = 160 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 1/106 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 K ++ A+E ++ A P GA+ V II GN K T HAE Sbjct: 4 KSHEFYLERAIEVSKEARESGNTPFGAILVDKEGNIIMEQGNIEITAKKCTGHAEASLAE 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 S+E L + LY T EPC MCA AI A I + Y + + Sbjct: 64 RASHEYSKEFLWDCTLYTTAEPCCMCAGAIYWANIGTVAYAMTEKR 109 >gi|71653641|ref|XP_815455.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70880510|gb|EAN93604.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 408 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 37/57 (64%) Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 E+DL+V+ EPC MC+ A+ +R+RR++Y +NP GG+ + + + + +H ++ Sbjct: 320 EIDLFVSHEPCVMCSMALVHSRVRRVFYCFANPTHGGLGSVFSIHAIPSLNHHFRVF 376 >gi|57102218|ref|XP_542193.1| PREDICTED: similar to CG10927-PA [Canis familiaris] Length = 355 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 5/68 (7%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGI 132 DLY+T EPC MCA A+ +R++R++YGA +P G GT+F + +H +++ G+ Sbjct: 287 DLYITREPCAMCAMALVHSRVQRVFYGAPSPDGA---LGTRFRIHARPDLNHRFQVFRGV 343 Query: 133 SEQRSRQI 140 E + R++ Sbjct: 344 LEAQCRRL 351 >gi|154305221|ref|XP_001553013.1| hypothetical protein BC1G_08905 [Botryotinia fuckeliana B05.10] gi|150853647|gb|EDN28839.1| hypothetical protein BC1G_08905 [Botryotinia fuckeliana B05.10] Length = 243 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 62/156 (39%), Gaps = 50/156 (32%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI------ 59 M AL A A NE PVG V V K+++R N + T HAE +AI Sbjct: 1 MREALAMANLALSTNETPVGCVLVDPTLKKVVARGMNATNRSYNGTRHAEFIAIDELLSS 60 Query: 60 ----------------------RMGC------------RILSQEILPEVDLYVTLEPCTM 85 + C R E + +DLYVT+EPC M Sbjct: 61 SPKVERGDVDENRSVKRKRGESEIECHDEKVDESENSKRSYGPEDMRSLDLYVTIEPCIM 120 Query: 86 CAAAISLARIRRLYYGASNPKGGG--------IENG 113 CA+ + IR+++YGA N K GG +ENG Sbjct: 121 CASLLQQFGIRKVWYGAVNDKFGGNGGVLNIHVENG 156 >gi|331004720|ref|ZP_08328174.1| hypothetical protein HMPREF0491_03036 [Lachnospiraceae oral taxon 107 str. F0167] gi|330409099|gb|EGG88557.1| hypothetical protein HMPREF0491_03036 [Lachnospiraceae oral taxon 107 str. F0167] Length = 160 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 45/103 (43%), Gaps = 1/103 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 KK ++ +E +QNA P GA+ V KI+ N K T HAE Sbjct: 4 KKHEYYLRRCIEISQNARNNGNTPFGAILVDEYGKILLEQENIEITGKICTGHAETTLAE 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + S+E L LY T EPC MC AI A I R+ + + Sbjct: 64 RASHLYSKEFLWRCTLYTTAEPCAMCTGAIYWANIGRVVFAMT 106 >gi|189485534|ref|YP_001956475.1| riboflavin biosynthesis protein RibD [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287493|dbj|BAG14014.1| riboflavin biosynthesis protein RibD [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 355 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 36/160 (22%) Query: 4 GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRA------GNRNRELKDVTAHAE 55 GN +M AL+ AQ R VG V V +NKI+ R GN HAE Sbjct: 3 GNKYMQLALDLAQKGKGRVYTNPLVGCVIVKDNKIVGRGWHQCFGGN----------HAE 52 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109 + AI I + + DLYVTLEPC T C I A I+R+YY + Sbjct: 53 VNAI-----IDAGKNAEGADLYVTLEPCNSYGKRTPCTLTIIKAGIKRVYYAVPD---SN 104 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + G + ++ +++ G+ +++SR +I+D+ K + Sbjct: 105 VSGGREILE----RNNIKVHEGLLKKQSRILIKDYLKHLK 140 >gi|322821975|gb|EFZ28159.1| hypothetical protein TCSYLVIO_5619 [Trypanosoma cruzi] Length = 384 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 37/57 (64%) Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 E+DL+V+ EPC MC+ A+ +R+RR++Y +NP GG+ + + + + +H ++ Sbjct: 296 EIDLFVSHEPCVMCSMALVHSRVRRVFYCFANPTHGGLGSVFSIHAIPSLNHHFRVF 352 >gi|152981801|ref|YP_001353377.1| hypothetical protein mma_1687 [Janthinobacterium sp. Marseille] gi|151281878|gb|ABR90288.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 150 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 47/98 (47%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A+ AQ+ R P GAV + + I+ N D T HAE+ AIR+ + L Sbjct: 8 FLREAVRLAQDNKARGGRPFGAVLAVGGESIAIGVNNIVHSNDPTTHAEMEAIRVASQKL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 + L +Y + PC MC AA+ L + +YY N Sbjct: 68 GRPNLKGSVIYASGHPCPMCLAAMLLTGVDEVYYAFDN 105 >gi|196001961|ref|XP_002110848.1| hypothetical protein TRIADDRAFT_54182 [Trichoplax adhaerens] gi|190586799|gb|EDV26852.1| hypothetical protein TRIADDRAFT_54182 [Trichoplax adhaerens] Length = 283 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 37/66 (56%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134 DLYVT EPC MCA A+ +RI+R++Y + + G + + + + +H E++ I Sbjct: 217 DLYVTKEPCVMCAMALVHSRIKRVFYAVEDKEYGALGSRYKIHVHEGLNHHFEVFKNIYR 276 Query: 135 QRSRQI 140 R Q+ Sbjct: 277 DRCLQL 282 >gi|266622681|ref|ZP_06115616.1| putative cytosine deaminase [Clostridium hathewayi DSM 13479] gi|288865589|gb|EFC97887.1| putative cytosine deaminase [Clostridium hathewayi DSM 13479] Length = 160 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 1/98 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++ A+E ++ A P GA+ V + I+ GN K T HAE Sbjct: 9 YLRRAIEISKEARAAGNTPFGALLVNKDGDIVMEQGNIEITDKICTGHAEATLAARASHE 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 +++ L + LY T EPC MCA AI A I R+ YG + Sbjct: 69 FTKDYLWDCTLYTTAEPCAMCAGAIYWANIGRVVYGMT 106 >gi|224370210|ref|YP_002604374.1| RibD [Desulfobacterium autotrophicum HRM2] gi|223692927|gb|ACN16210.1| RibD [Desulfobacterium autotrophicum HRM2] Length = 381 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 48/154 (31%), Positives = 69/154 (44%), Gaps = 31/154 (20%) Query: 5 NVFMS---CALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM C E+ + N + VGAV V NN+++ + ++ L AHAE+ AI Sbjct: 18 NSFMEQAICLAEQGRGYTAPNPM-VGAVVVKNNQVVGQGWHKGPGL----AHAEVNAIDD 72 Query: 62 GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111 + ++ DLYVTLEPC C I A IRR++ G +P GGGI Sbjct: 73 -----AGDLARGSDLYVTLEPCNHTGRTPPCTEKILRAGIRRVFVGTEDPNPFVAGGGI- 126 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 +F + GI + S +I+DF Sbjct: 127 ---KFLK----ERGVAVKVGICRRASETLIEDFI 153 >gi|119715379|ref|YP_922344.1| guanine deaminase [Nocardioides sp. JS614] gi|119536040|gb|ABL80657.1| Guanine deaminase [Nocardioides sp. JS614] Length = 158 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 3/80 (3%) Query: 42 NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 NR D TAHAE+ AIR C L L LY + EPC +C A AR+ R+ Y Sbjct: 44 NRVTRDLDPTAHAEVTAIRQACAALGDFSLTGCVLYASCEPCPLCLTASLWARLDRVVYA 103 Query: 102 AS--NPKGGGIENGTQFYTL 119 A + GG ++ +FY L Sbjct: 104 ADRHDAARGGFDD-REFYDL 122 >gi|289522481|ref|ZP_06439335.1| putative cytosine deaminase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504317|gb|EFD25481.1| putative cytosine deaminase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 165 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 1/99 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++ A+E ++ A P GAV V ++ GN K T HAE++ + +I Sbjct: 13 YLRLAIETSRKARESGNTPFGAVLVGPEGDVLLEQGNVEITEKRCTGHAELVLVEKASQI 72 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 ++ L + LY ++EPC MC AI + + + Y S Sbjct: 73 YDKDFLWQCILYTSVEPCAMCTGAIYWSNVGTIIYALSE 111 >gi|156843603|ref|XP_001644868.1| hypothetical protein Kpol_1065p25 [Vanderwaltozyma polyspora DSM 70294] gi|156115520|gb|EDO17010.1| hypothetical protein Kpol_1065p25 [Vanderwaltozyma polyspora DSM 70294] Length = 154 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 3/96 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A EEA +P+G + N KI+ R N + T H EI + C Sbjct: 11 MDVAYEEASKGYEEGGVPIGGCLINNEDGKILGRGHNMRFQKGSATLHGEISTLE-NCGR 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 L ++ LY TL PC MC AI + I R+ G Sbjct: 70 LEGKVYKNTTLYTTLSPCDMCTGAILMYGIPRVVVG 105 >gi|323357173|ref|YP_004223569.1| cytosine/adenosine deaminase [Microbacterium testaceum StLB037] gi|323273544|dbj|BAJ73689.1| cytosine/adenosine deaminase [Microbacterium testaceum StLB037] Length = 159 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 38/80 (47%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA+ V + + A N +DVT HAE +R + L LP LY + EPC Sbjct: 30 PFGALLVTADGRVVEAENTVLTERDVTGHAETNLVRRVWKDLDAAELPASTLYTSCEPCA 89 Query: 85 MCAAAISLARIRRLYYGASN 104 MC AI A I R+ Y S Sbjct: 90 MCCGAIFWAGIGRVVYALSG 109 >gi|284031454|ref|YP_003381385.1| CMP/dCMP deaminase zinc-binding protein [Kribbella flavida DSM 17836] gi|283810747|gb|ADB32586.1| CMP/dCMP deaminase zinc-binding protein [Kribbella flavida DSM 17836] Length = 143 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 32/141 (22%), Positives = 67/141 (47%), Gaps = 8/141 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A+E A A P G++ A + +++ N + D+TAH E+ R Sbjct: 9 FLRRAIELAATADKSGNPPFGSLLAGPDGTVLAEDHNTSVTDNDITAHPELKLARWAAAN 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L+ ++ +Y + +PC MC+ A+ + + R+ Y S + ++ G F + Sbjct: 69 LTPDVAAGTTMYTSCQPCRMCSGALERSGLGRVVYALSGDQLNALKPGGGFAPV------ 122 Query: 126 PEIYPGISEQRSRQIIQDFFK 146 PE P + ++ R ++++++K Sbjct: 123 PEDGPALYDE-GRAVVENYYK 142 >gi|85001518|ref|XP_955475.1| cytidine and deoxycytidylate deaminase family protein [Theileria annulata strain Ankara] gi|65303621|emb|CAI75999.1| cytidine and deoxycytidylate deaminase family protein, putative [Theileria annulata] Length = 183 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 15/119 (12%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +FM ALEEA+ A + EI V + V ++++ + N + T H E+ AI Sbjct: 11 IFMKLALEEAKKALDKEEIAVACIIVSKATREVVASSSNATNLTYNSTWHCELEAINKLI 70 Query: 64 RILSQEILPEVD------------LYVTLEPCTMCAAAISLARIRRL-YYGASNPKGGG 109 + E D L+VT EPC MC A+ + I L YYG N K GG Sbjct: 71 DMEPNGYKSEQDSEKLREFCSGFALFVTCEPCIMCTTALQIIGIFLLMYYGCKNEKFGG 129 >gi|283781867|ref|YP_003372622.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM 6068] gi|283440320|gb|ADB18762.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM 6068] Length = 157 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 14/102 (13%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A+E A++ ++P GAV V + KII AG N+ + T H EI+A+ Sbjct: 16 YMRAAIELARHVP---QLPFGAVIVDRSSGKII--AGGFNQSAMNPTWHGEIVALN---- 66 Query: 65 ILSQEIL---PEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L+Q L P + LY T EPC MC AI ++I L YG S Sbjct: 67 DLAQRGLHDRPSLALYTTAEPCPMCMGAILWSQIEELIYGTS 108 >gi|154150488|ref|YP_001404106.1| cytosine deaminase [Candidatus Methanoregula boonei 6A8] gi|153999040|gb|ABS55463.1| Cytosine deaminase [Methanoregula boonei 6A8] Length = 177 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 A+ EA+ IP+G+V V++ KI+ R NR + HAE+ + R +E Sbjct: 39 AILEARKGLAEGGIPIGSVLVIDGKIVGRGHNRRVQNNSAILHAEMDCLENAGRRTPKE- 97 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L+ TL PC MC+ + L +I R+ G + Sbjct: 98 YKRATLFSTLSPCDMCSGVVLLYKIPRVVIGEN 130 >gi|126728506|ref|ZP_01744322.1| hypothetical protein SSE37_20987 [Sagittula stellata E-37] gi|126711471|gb|EBA10521.1| hypothetical protein SSE37_20987 [Sagittula stellata E-37] Length = 156 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 3/84 (3%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 + +++R N D + HAEI+AI CR L L L TL+PC MC AI Sbjct: 38 GDTLLARGANEVHLNHDPSRHAEIVAISAACRALGTADLSGCTLLTTLQPCEMCLGAIRF 97 Query: 93 ARIRRLYYGASNPKGGGIENGTQF 116 A I R+ + A + GG++ F Sbjct: 98 AGIGRVIFAA---RKGGVQADKYF 118 >gi|50083486|ref|YP_044996.1| putative cytidine and deoxycytidylate deaminase zinc-binding protein [Acinetobacter sp. ADP1] gi|49529462|emb|CAG67174.1| putative cytidine and deoxycytidylate deaminase zinc-binding protein [Acinetobacter sp. ADP1] Length = 184 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 2/84 (2%) Query: 25 PVGAVAV-LNNKIISRAGNRN-RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 P A+ V + I++ AGN + D T HAE +A R+ S + L LY EP Sbjct: 52 PFAAIVVDADGNIVTEAGNNSLPPTGDPTRHAETVAAGQAARLKSLKELRTCTLYTNAEP 111 Query: 83 CTMCAAAISLARIRRLYYGASNPK 106 C MCA AI I R+ YG S K Sbjct: 112 CAMCAGAIYWTGIGRVVYGMSEKK 135 >gi|50286109|ref|XP_445483.1| hypothetical protein [Candida glabrata CBS 138] gi|49524788|emb|CAG58394.1| unnamed protein product [Candida glabrata] gi|109706861|gb|ABG43005.1| cytosine deaminase [Candida glabrata] gi|109706865|gb|ABG43007.1| cytosine deaminase [Candida glabrata] Length = 155 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 5/100 (5%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A EEA +P+G ++NNK ++ R N + T H EI + C Sbjct: 12 MKIAYEEAAKGFEEGGVPIGG-CLINNKDGTVLGRGHNMRFQKGSPTLHGEISTLE-NCG 69 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L ++ + LY TL PC MC AI L I R G S+ Sbjct: 70 RLEGKVYKDTTLYTTLSPCDMCTGAILLYGIPRCVIGESD 109 >gi|289583345|ref|YP_003481755.1| CMP/dCMP deaminase zinc-binding protein [Natrialba magadii ATCC 43099] gi|289532843|gb|ADD07193.1| CMP/dCMP deaminase zinc-binding protein [Natrialba magadii ATCC 43099] Length = 156 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 43/93 (46%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A + A+ A R + P G+V V +N ++ A NR D+ H E+ R Sbjct: 12 MHRAFDLAREAVARGDRPFGSVLVRDNTVVDSASNRVVTEDDIRRHPELHLAYRAVRGFD 71 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E+ +Y + EPC MCA + A + R+ Y Sbjct: 72 PAGRAELVMYTSTEPCPMCAGGLVSAGLDRIVY 104 >gi|307102708|gb|EFN50977.1| hypothetical protein CHLNCDRAFT_33285 [Chlorella variabilis] Length = 167 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 4/103 (3%) Query: 5 NVFMSCALEEAQNAALRNEIP--VGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+E + A L + GA+ V +++ N+ D T H E+ AIR Sbjct: 8 ETYMKRAIELSAKAGLEEQTGGCFGALIVDKETGEVVGEGYNKVILNNDPTWHGEMEAIR 67 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 C+ +P Y + +PC MC AI AR+ +YYGA+ Sbjct: 68 EACKARGSPHIPGTVCYTSAQPCPMCYTAIMWARVDHVYYGAT 110 >gi|11245466|gb|AAG33626.1|AF312392_1 cytosine deaminase-uracil phosphoribosyltransferase fusion protein [synthetic construct] Length = 373 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 15/145 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A EEA +P+G ++NNK ++ R N + T H EI + C Sbjct: 15 MDIAYEEAALGYKEGGVPIGG-CLINNKDGSVLGRGHNMRFQKGSATLHGEISTLE-NCG 72 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATCH 123 L ++ + LY TL PC MC AI + I R G + N K G + L T Sbjct: 73 RLEGKVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFKSKGEK------YLQTRG 126 Query: 124 HSPEIYPGISEQRSRQIIQDFFKER 148 H + + ++R ++I++ F ER Sbjct: 127 HEVVV---VDDERCKKIMKQFIDER 148 >gi|320164019|gb|EFW40918.1| tRNA-specific adenosine deaminase 2 [Capsaspora owczarzaki ATCC 30864] Length = 307 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 37/71 (52%) Query: 39 RAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 RAG+ + + L+ R S +I DLYVT+EPC MCAAA+ L I + Sbjct: 162 RAGSLSASPHSPPTLSLFLSERATSVATSTQIFQHCDLYVTVEPCVMCAAALRLVGIGAV 221 Query: 99 YYGASNPKGGG 109 YYG N + GG Sbjct: 222 YYGCGNDRFGG 232 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAI 59 FM AL++A A E+PVG V VL ++I R NR E K+ T HAE AI Sbjct: 21 FMQSALDKAYEALEVGEVPVGCVIVLRETGQVIGRGCNRTNETKNATRHAEFEAI 75 >gi|109706863|gb|ABG43006.1| cytosine deaminase [Candida glabrata] Length = 155 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 5/100 (5%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A EEA +P+G ++NNK ++ R N + T H EI + C Sbjct: 12 MKIAYEEAAKGFEEGGVPIGG-CLINNKDGTVLGRGHNMRFQKGSPTLHGEISTLE-NCG 69 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L ++ + LY TL PC MC AI L I R G S+ Sbjct: 70 RLEGKVYKDTTLYTTLSPCDMCTGAILLYGIPRCVIGESD 109 >gi|67464322|pdb|1YSD|A Chain A, Yeast Cytosine Deaminase Double Mutant gi|67464323|pdb|1YSD|B Chain B, Yeast Cytosine Deaminase Double Mutant Length = 161 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 15/145 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A EEA +P+G ++NNK ++ R N + T H EI + C Sbjct: 18 MDIAYEEALLGYKEGGVPIGG-CLINNKDGSVLGRGHNMRFQKGSATLHGEISTLE-NCG 75 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATCH 123 L ++ + LY TL PC MC AI + I R G + N K G ++ L T Sbjct: 76 RLEGKVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFK----SKGEKY--LQTRG 129 Query: 124 HSPEIYPGISEQRSRQIIQDFFKER 148 H + + ++R +++++ F ER Sbjct: 130 HEVVV---VDDERCKKLMKQFIDER 151 >gi|110669248|ref|YP_659059.1| cytosine/adenosine deaminases [Haloquadratum walsbyi DSM 16790] gi|109626995|emb|CAJ53471.1| cytosine/adenosine deaminases [Haloquadratum walsbyi DSM 16790] Length = 154 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 44/95 (46%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + M AL+ A+ +A R + P G+V V ++ ++ R N D+ H E+ C+ Sbjct: 13 MHMQEALKLARESAARGDEPFGSVLVRDDTVVMRESNHEITESDIRRHPELHLAYRACQA 72 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + E+ +Y T EPC MCA + A Y Sbjct: 73 YDSDERAEMVMYTTTEPCPMCAGGMVTAGFDSTVY 107 >gi|291279486|ref|YP_003496321.1| bifunctional riboflavin biosynthesis protein RibD [Deferribacter desulfuricans SSM1] gi|290754188|dbj|BAI80565.1| bifunctional riboflavin biosynthesis protein RibD [Deferribacter desulfuricans SSM1] Length = 384 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 27/131 (20%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGA+ V + KII R + +HAEI A+ E L DLYVTLEPC++ Sbjct: 28 VGAIIVKDGKIIGRGYHEEYG----KSHAEINAMNDAV-----EPLEGADLYVTLEPCSI 78 Query: 86 ------CAAAISLARIRRLYYGASNPK----GGGIENGTQFYTLATCHHSPEIYPGISEQ 135 C AI +I+R++ G +P G GI + E++ G E+ Sbjct: 79 HGKTPPCVDAIIENKIKRVFIGVVDPNPKIAGQGI--------IKLIEAGVEVFVGFDEE 130 Query: 136 RSRQIIQDFFK 146 II+DF K Sbjct: 131 LCASIIEDFTK 141 >gi|67464318|pdb|1YSB|A Chain A, Yeast Cytosine Deaminase Triple Mutant gi|67464319|pdb|1YSB|B Chain B, Yeast Cytosine Deaminase Triple Mutant Length = 161 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 15/145 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A EEA +P+G ++NNK ++ R N + T H EI + C Sbjct: 18 MDIAYEEALLGYKEGGVPIGG-CLINNKDGSVLGRGHNMRFQKGSATLHGEISTLE-NCG 75 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATCH 123 L ++ + LY TL PC MC AI + I R G + N K G ++ L T Sbjct: 76 RLEGKVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVIGENVNFK----SKGEKY--LQTRG 129 Query: 124 HSPEIYPGISEQRSRQIIQDFFKER 148 H + + ++R +++++ F ER Sbjct: 130 HEVVV---VDDERCKKLMKQFIDER 151 >gi|323347994|gb|EGA82253.1| Tad2p [Saccharomyces cerevisiae Lalvin QA23] Length = 244 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 17/153 (11%) Query: 8 MSCALEEAQNAALRNEIPVGAV--AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ A+ A +E PV + ++++ N + AHAE + I + Sbjct: 1 MRTAVRLARYALDHDETPVACIFEHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 60 Query: 66 LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTLA 120 L ++ ++ LYVT+EPC MCA+A+ I ++ +G N + GG NGT Sbjct: 61 LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGG--NGTVLSVNHD 118 Query: 121 TCHHSP--------EIYPGISEQRSRQIIQDFF 145 TC P E PGI + + +++ F+ Sbjct: 119 TCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 151 >gi|290771180|emb|CAY80744.2| Tad2p [Saccharomyces cerevisiae EC1118] Length = 250 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 11/129 (8%) Query: 8 MSCALEEAQNAALRNEIPVGAV--AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ A+ A +E PV + ++++ N + AHAE + I + Sbjct: 7 MRTAVRLARYALDHDETPVACIFEHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 66 Query: 66 LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L ++ ++ LYVT+EPC MCA+A+ I ++ +G N + GG NGT L+ Sbjct: 67 LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGG--NGT---VLSV 121 Query: 122 CHHSPEIYP 130 H + + P Sbjct: 122 NHDTCTLVP 130 >gi|126641361|ref|YP_001084345.1| CMP/dCMP deaminase zinc-binding [Acinetobacter baumannii ATCC 17978] Length = 116 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 35/60 (58%) Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 D TAHAE+LAIR+ ++L L ++ + PC MC AA+ LA I+ + Y SN G Sbjct: 5 DPTAHAELLAIRVASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDGA 64 >gi|317494530|ref|ZP_07952943.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917460|gb|EFV38806.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 152 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 51/107 (47%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + ++ AL A + + P GAV V N ++++ A N D TAHAE+ IR Sbjct: 1 MSSHDEYLQRALALAAESVEQGGRPFGAVIVRNGEVVAEAVNTIHLNGDPTAHAELNGIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 L E +Y + +PC MC +A+ L ++ +Y+ N G Sbjct: 61 DVSTRHGSTALRECVVYASGQPCPMCLSAMYLTGVQAVYFANGNQDG 107 >gi|256271071|gb|EEU06172.1| Tad2p [Saccharomyces cerevisiae JAY291] Length = 250 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 11/129 (8%) Query: 8 MSCALEEAQNAALRNEIPVGAV--AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ A+ A +E PV + ++++ N + AHAE + I + Sbjct: 7 MRTAVRLARYALDHDETPVACIFEHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 66 Query: 66 LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L ++ ++ LYVT+EPC MCA+A+ I ++ +G N + GG NGT L+ Sbjct: 67 LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGG--NGT---VLSV 121 Query: 122 CHHSPEIYP 130 H + + P Sbjct: 122 NHDTCTLVP 130 >gi|307153182|ref|YP_003888566.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822] gi|306983410|gb|ADN15291.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822] Length = 165 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 8/138 (5%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL---SQEIL 71 A +A RN++ V A+ ++II N + ++ HAEI+ + L SQE Sbjct: 21 ASDAISRNKVGVAALLACGDEIIVLDHNPFADTQNPLDHAEIVVLNKAGSYLTKCSQEQK 80 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGA----SNPKGGGIENGT-QFYTLATCHHSP 126 ++ LY TLEPC +C A S IRR+ Y A +N +G I+ T + Sbjct: 81 SKLTLYSTLEPCLICLLAASFVGIRRIVYAALAEDANQQGQLIKGMTARTINPYLTKGEM 140 Query: 127 EIYPGISEQRSRQIIQDF 144 E+ PG+ ++ + +++ Sbjct: 141 ELIPGVKREQGKALLEQM 158 >gi|77458955|ref|YP_348461.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas fluorescens Pf0-1] gi|77382958|gb|ABA74471.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas fluorescens Pf0-1] Length = 169 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 4/95 (4%) Query: 11 ALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQ 68 AL EA R P A VA N K+I AGN + + D T HAE++A ++LS Sbjct: 25 ALSEASKQ--RGRHPFAALVADRNGKVIVEAGNNSMPPEGDPTQHAELVAAAAAAKLLSP 82 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + L LY + EPC MCA A+ I R+ Y S Sbjct: 83 QELELCTLYTSAEPCCMCAGAVYWTGIGRVVYALS 117 >gi|683699|emb|CAA88261.1| orf2 [Saccharomyces cerevisiae] Length = 213 Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 10/93 (10%) Query: 42 NRNRELKDVTAHAEILAIRMGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLARIRR 97 + N+ L V AHAE + I +L ++ ++ LYVT+EPC MCA+A+ I + Sbjct: 7 DTNKSLTGV-AHAEFMGIDQIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQLDIGK 65 Query: 98 LYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130 + +G N + GG NGT L+ H + + P Sbjct: 66 VVFGCGNERFGG--NGT---VLSVNHDTCTLVP 93 >gi|116669980|ref|YP_830913.1| CMP/dCMP deaminase, zinc-binding [Arthrobacter sp. FB24] gi|116610089|gb|ABK02813.1| CMP/dCMP deaminase, zinc-binding protein [Arthrobacter sp. FB24] Length = 161 Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 38/76 (50%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GA+ V + NR D TAHAE++AIR + L LY + EPC Sbjct: 31 PFGALVVTADGTRHFGVNRVTRDNDPTAHAEVVAIRTAAAESANFDLSGAVLYASCEPCP 90 Query: 85 MCAAAISLARIRRLYY 100 +C AA ARI R+Y+ Sbjct: 91 LCLAAALWARIDRVYF 106 >gi|158429187|pdb|2O3K|A Chain A, Yeast Cytosine Deaminase D92e Triple Mutant Bound To Transition State Analogue Hpy gi|158429188|pdb|2O3K|B Chain B, Yeast Cytosine Deaminase D92e Triple Mutant Bound To Transition State Analogue Hpy Length = 161 Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 15/145 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A EEA +P+G ++NNK ++ R N + T H EI + C Sbjct: 18 MDIAYEEALLGYKEGGVPIGG-CLINNKDGSVLGRGHNMRFQKGSATLHGEISTLE-NCG 75 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATCH 123 L ++ + LY TL PC MC AI + I R G + N K G ++ L T Sbjct: 76 RLEGKVYKDTTLYTTLSPCEMCTGAIIMYGIPRCVIGENVNFK----SKGEKY--LQTRG 129 Query: 124 HSPEIYPGISEQRSRQIIQDFFKER 148 H + + ++R +++++ F ER Sbjct: 130 HEVVV---VDDERCKKLMKQFIDER 151 >gi|222082119|ref|YP_002541484.1| hypothetical protein Arad_8671 [Agrobacterium radiobacter K84] gi|221726798|gb|ACM29887.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 158 Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 1/99 (1%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 VF+ + E A A L P GA+ V + ++ N +D+T HAE + + + Sbjct: 9 VFLRRSFEVAARARLNGNHPFGAILVGPDGTVLMEQENAYNPTQDMTGHAERVLMTRASQ 68 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 S L + +Y + EPC MCA A A + R+ YG S Sbjct: 69 QYSPGFLVQCAMYTSAEPCAMCAGAAYWAGVGRVVYGLS 107 >gi|330991695|ref|ZP_08315645.1| putative cytosine deaminase [Gluconacetobacter sp. SXCC-1] gi|329761163|gb|EGG77657.1| putative cytosine deaminase [Gluconacetobacter sp. SXCC-1] Length = 280 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 4/101 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKDVTAHAE-ILAIRMGC 63 F+ A A+ A + P G + V K++ GN E D+TAHAE +LA R Sbjct: 126 FLRRAFAVAERARQGGDHPFGCILVDATGKVVLEQGNGYTAEGGDMTAHAERLLATRASK 185 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 R E L +Y + EPC MCA A+ A I R+ YG S Sbjct: 186 RFPPAE-LAGCTMYTSAEPCAMCAGAVYWAGIGRVVYGQSE 225 >gi|149391445|gb|ABR25740.1| tRNA-specific adenosine deaminase [Oryza sativa Indica Group] Length = 106 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 35/63 (55%) Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 E DLYVT EPC MCA A+S+ IR +Y+G +N K GG + + ++ S E Sbjct: 2 EKFARCDLYVTCEPCIMCAMALSILGIREVYFGCANDKFGGCGSIMSLHQSSSAELSGEE 61 Query: 129 YPG 131 PG Sbjct: 62 IPG 64 >gi|291084824|ref|ZP_06542690.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 76 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 36/61 (59%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G +L Sbjct: 11 WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70 Query: 67 S 67 Sbjct: 71 Q 71 >gi|255994555|ref|ZP_05427690.1| riboflavin biosynthesis protein RibD [Eubacterium saphenum ATCC 49989] gi|255993268|gb|EEU03357.1| riboflavin biosynthesis protein RibD [Eubacterium saphenum ATCC 49989] Length = 368 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 77/160 (48%), Gaps = 30/160 (18%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 +K +MS ALE A+ L P VGAV V N +II + ++ K +AHAE+ Sbjct: 6 IKDKEKYMSMALELAEKG-LGTTSPNPMVGAVIVKNGEIIGKGFHK----KAGSAHAEVE 60 Query: 58 AIRMGCRILSQEILPE-VDLYVTLEPCT------MCAAAISLARIRRLYYGASNP----K 106 A++ S++ E D+YVTLEPC+ C+ + +I R++ G +P Sbjct: 61 AVQ---DAHSKDYDIEGADMYVTLEPCSHKGRTPACSDLLIKEKIGRVFIGMRDPNPLVN 117 Query: 107 GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 GGGIE L C GI E+R RQ+ + F K Sbjct: 118 GGGIEKLEG--ALIKCE------VGILEERCRQLNKVFLK 149 >gi|322704161|gb|EFY95759.1| cytidine and deoxycytidylate deaminase [Metarhizium anisopliae ARSEF 23] Length = 469 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 1/51 (1%) Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 I G R+ S+EI+ E LYVT+EPC MCA+ + I+++Y+GA N K GG Sbjct: 266 IHAGDRV-SREIIRECILYVTVEPCVMCASLLRQLGIKKVYFGAVNDKFGG 315 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 30/53 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 F+ AL+ A+ A NE PVG V V N II++ N ++ T HAE +AI Sbjct: 151 FIEEALDMARLALRTNETPVGCVLVHNGTIIAKGMNATNVTRNGTRHAEFMAI 203 >gi|293115762|ref|ZP_05792940.2| guanine deaminase [Butyrivibrio crossotus DSM 2876] gi|292808437|gb|EFF67642.1| guanine deaminase [Butyrivibrio crossotus DSM 2876] Length = 194 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 1/104 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAI 59 K ++ A+E ++ + P G V V + +II GN K T HAE + + Sbjct: 36 WKSDEYYLEKAIEVSRKSRAGGNTPFGCVLVDGDGEIILEQGNVEITEKRCTGHAETVIM 95 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 ++ ++ L LY T EPC MCA A+ + ++ Y + Sbjct: 96 ERASKLYDKKFLWNCTLYTTCEPCPMCAGAVYWGNVGKVVYAMT 139 >gi|322797886|gb|EFZ19783.1| hypothetical protein SINV_80092 [Solenopsis invicta] Length = 423 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 41/68 (60%) Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136 ++ +EPC +CA A+ +R+ R++YG +N G + + T +T+ +H ++ GI E+ Sbjct: 349 FLLVEPCPLCAMALLHSRVARIFYGTANESAGVLGSRTVLHTVPGLNHRYRVWSGILERE 408 Query: 137 SRQIIQDF 144 RQ +++ Sbjct: 409 CRQALEEI 416 >gi|146157359|gb|ABQ08114.1| hypothetical protein [Tropheryma whipplei] Length = 60 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 23/52 (44%), Positives = 32/52 (61%) Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 IR ++L L + L+VT+EPCTMCA AI +RI R+ +G N K G + Sbjct: 1 IRKASQMLKDWRLSGLTLFVTMEPCTMCAGAIVTSRISRVVFGVFNNKTGSV 52 >gi|66815967|ref|XP_642000.1| cytidine deaminase-like protein [Dictyostelium discoideum AX4] gi|60470041|gb|EAL68022.1| cytidine deaminase-like protein [Dictyostelium discoideum AX4] Length = 519 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 6/83 (7%) Query: 63 CRILS-----QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 C ILS Q + L++T EPC MC+ A+ +R++R+ YG+S+ + GG+ + + + Sbjct: 431 CNILSFVNLGQYLATNFHLFITKEPCIMCSMALVHSRVKRVVYGSSS-RDGGLGSYLKIH 489 Query: 118 TLATCHHSPEIYPGISEQRSRQI 140 T + +H E+Y E +++ Sbjct: 490 TEKSLNHRFEVYKDFMEDECKKL 512 >gi|255658129|ref|ZP_05403538.1| riboflavin biosynthesis protein RibD [Mitsuokella multacida DSM 20544] gi|260849436|gb|EEX69443.1| riboflavin biosynthesis protein RibD [Mitsuokella multacida DSM 20544] Length = 363 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 69/149 (46%), Gaps = 23/149 (15%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM ALE A+NA R P VGAV V +I++ +R K T HAEI A+RM Sbjct: 6 FMREALELARNAEGRTS-PNPMVGAVIVQGGRIVAAGWHR----KAGTPHAEIHALRM-- 58 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + E+ LYVTLEPC+ CA A+ A I+R +P G + Sbjct: 59 ---AGELAKGATLYVTLEPCSHYGRTGPCAKAVVEAGIKRCVIAMKDPNPLVAGRGIKIL 115 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E G+ E+ +R++ + F K Sbjct: 116 EDAGV----ETVCGVLEEEARRLNEVFLK 140 >gi|310793981|gb|EFQ29442.1| cytidine and deoxycytidylate deaminase zinc-binding region [Glomerella graminicola M1.001] Length = 398 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 59/162 (36%), Gaps = 57/162 (35%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI------ 59 FM AL+ A+ A NE PVG V V N +I+R N ++ T HAE +A+ Sbjct: 83 AFMGQALDMARLALRTNETPVGCVLVYNGSVIARGMNATNVTRNGTRHAEFMAVSALLSY 142 Query: 60 -------------------RMGCRILSQE--ILPEVDLY--------------------- 77 R + E + P D Y Sbjct: 143 RSRNNEEAADTQLRQQASERSKADVTDDESDLFPMDDDYVKEGHLYPYGQKLHRAMRVER 202 Query: 78 ---------VTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 VT+EPC MCA + I+++Y+GA N K GG Sbjct: 203 SIVRECTLYVTVEPCVMCAGLLRQLGIKKVYFGAVNDKFGGT 244 >gi|323337097|gb|EGA78353.1| Tad2p [Saccharomyces cerevisiae Vin13] Length = 213 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 10/93 (10%) Query: 42 NRNRELKDVTAHAEILAIRMGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLARIRR 97 + N+ L V AHAE + I +L ++ ++ LYVT+EPC MCA+A+ I + Sbjct: 7 DTNKSLTGV-AHAEFMGIDQIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGK 65 Query: 98 LYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130 + +G N + GG NGT L+ H + + P Sbjct: 66 VVFGCGNERFGG--NGT---VLSVNHDTCTLVP 93 >gi|296166409|ref|ZP_06848841.1| possible guanine deaminase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898170|gb|EFG77744.1| possible guanine deaminase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 166 Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 36/66 (54%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P V V + ++++ + N + D TAHAEILAIR C L E L + +Y+ PC Sbjct: 22 PFATVIVNDGEVLAESANMVAQANDPTAHAEILAIREACMKLGTEHLVDSTVYLMAHPCP 81 Query: 85 MCAAAI 90 MC ++ Sbjct: 82 MCLGSL 87 >gi|212540050|ref|XP_002150180.1| cytosine deaminase, putative [Penicillium marneffei ATCC 18224] gi|210067479|gb|EEA21571.1| cytosine deaminase, putative [Penicillium marneffei ATCC 18224] Length = 148 Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 2/100 (2%) Query: 11 ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A+EEA+ +P+GA V + KI+ R N + T H EI A+ R L Sbjct: 10 AVEEARQGQAEGGVPIGACLVSKDGKILGRGHNMRFQKGSATLHGEISALENSGR-LPAS 68 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 +Y TL PC MC A L +++R+ G + GG Sbjct: 69 AYEGATMYTTLSPCDMCTGACILYKVKRVVVGENKTFLGG 108 >gi|145229091|ref|XP_001388854.1| cytosine deaminase [Aspergillus niger CBS 513.88] gi|134054953|emb|CAK36962.1| unnamed protein product [Aspergillus niger] Length = 148 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 2/100 (2%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A+EEA+ A +P+GA V + KI+ R N + HAE+ A+ R L Sbjct: 10 AVEEAKQGAAEGGVPIGACLVSKDGKILGRGHNMRVQKGSPVLHAEMSALENSGR-LPAS 68 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 +Y TL PC MC A L +++R+ G + GG Sbjct: 69 AYEGATMYTTLSPCDMCTGACILYKVKRVVVGENKSFMGG 108 >gi|269838046|ref|YP_003320274.1| CMP/dCMP deaminase zinc-binding protein [Sphaerobacter thermophilus DSM 20745] gi|269787309|gb|ACZ39452.1| CMP/dCMP deaminase zinc-binding protein [Sphaerobacter thermophilus DSM 20745] Length = 148 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 38/76 (50%) Query: 27 GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMC 86 GAV V + ++I+ N D TAHAE +A+R L L LY T +PC MC Sbjct: 28 GAVVVRDGQVIATGRNEATTTSDPTAHAETIAVRNAGMALGTLDLSGCTLYATFQPCPMC 87 Query: 87 AAAISLARIRRLYYGA 102 +I ++ I + GA Sbjct: 88 CGSILVSGISTVVIGA 103 >gi|291287235|ref|YP_003504051.1| riboflavin biosynthesis protein RibD [Denitrovibrio acetiphilus DSM 12809] gi|290884395|gb|ADD68095.1| riboflavin biosynthesis protein RibD [Denitrovibrio acetiphilus DSM 12809] Length = 387 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 19/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGA+ ++I+SR + + HAE+ AI C + ++ + DLYVTLEPC+ Sbjct: 32 VGAIVANQSEILSRGWH----MAYGGPHAEVNAID-SCPVSTEGL----DLYVTLEPCSH 82 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C I + IRR++ G +P G ++ +H E+Y G E Sbjct: 83 SGKTPPCVEKIVKSGIRRVFIGVVDPNPLVAGKGVEYLK----NHGVEVYVGYMEDLCAS 138 Query: 140 IIQDFFK 146 II+DF K Sbjct: 139 IIEDFVK 145 >gi|134107133|ref|XP_777879.1| hypothetical protein CNBA5760 [Cryptococcus neoformans var. neoformans B-3501A] gi|50260577|gb|EAL23232.1| hypothetical protein CNBA5760 [Cryptococcus neoformans var. neoformans B-3501A] Length = 165 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FMS A E+A + IP+GA V + ++IISR N +L H E+ + R Sbjct: 17 FMSVAHEQALKSLSEGGIPIGAALVHLPTSRIISRGHNNRVQLSSNVRHGEMDCLENLGR 76 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + + +L E ++ TL PC MC+A L +IR + Sbjct: 77 V-PEGLLSECAMFTTLSPCIMCSATCILYKIRTV 109 >gi|306821102|ref|ZP_07454718.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550795|gb|EFM38770.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 108 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 10/106 (9%) Query: 51 TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 T HAE IR C L E LY + EPC MC+ A+ ++ RL YGASN + + Sbjct: 4 TVHAEAGLIREFCAKTGISNLQEYTLYSSCEPCFMCSGAMVWVKLGRLVYGASNME---L 60 Query: 111 EN-------GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 EN PE+ G+ S +++++ F + + Sbjct: 61 ENILGNEGCNCSKLVFDNSFWKPEVTEGVLRDESLEVLKEHFSKHK 106 >gi|302679520|ref|XP_003029442.1| hypothetical protein SCHCODRAFT_78305 [Schizophyllum commune H4-8] gi|300103132|gb|EFI94539.1| hypothetical protein SCHCODRAFT_78305 [Schizophyllum commune H4-8] Length = 158 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 14/145 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK----IISRAGNRNRELKDVTAHAEILAIRMGC 63 M A EEA A IP+G+ V ++ +I+ N + T H EI + Sbjct: 13 MQRAFEEADAGAKEGGIPIGSALVQHDDSGDHLIASGRNLRIQKGSATLHGEICCLETAG 72 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R L + + +Y TL PC MC AI L +I R+ G + GG E Q Sbjct: 73 R-LKAGVYRKCTIYTTLSPCIMCTGAILLYKIPRVVIGENANFVGGEELLKQ-------- 123 Query: 124 HSPEIYPGISEQRSRQIIQDFFKER 148 H E+ + + R ++++ F KE+ Sbjct: 124 HGVEVVV-LDDNRCKELMAKFIKEK 147 >gi|58259071|ref|XP_566948.1| cytosine deaminase [Cryptococcus neoformans var. neoformans JEC21] gi|57223085|gb|AAW41129.1| cytosine deaminase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 165 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FMS A E+A + IP+GA V + ++IISR N +L H E+ + R Sbjct: 17 FMSVAHEQALKSLSEGGIPIGAALVHLPTSRIISRGHNNRVQLSSNVRHGEMDCLENLGR 76 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + + +L E ++ TL PC MC+A L +IR + Sbjct: 77 V-PEGLLSECAMFTTLSPCIMCSATCILYKIRTV 109 >gi|158312920|ref|YP_001505428.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec] gi|158108325|gb|ABW10522.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec] Length = 188 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 32/108 (29%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE---ILPEVDLYVTLE 81 P GAV V + +I++R NR D TAHAE+ +IR ++L+ E I PE TLE Sbjct: 25 PFGAVIVKDGEIVARGQNRVLLTGDPTAHAEVESIRKAIQVLNPEGPTIAPEEQDLATLE 84 Query: 82 -----------------------------PCTMCAAAISLARIRRLYY 100 PC MC +AI +RI +YY Sbjct: 85 LVPRPEGSPDRVPKRAKMLMGYSIYTAGIPCPMCMSAIYWSRISDVYY 132 >gi|119961232|ref|YP_946898.1| cytosine deaminase [Arthrobacter aurescens TC1] gi|119948091|gb|ABM07002.1| Cytosine deaminase [Arthrobacter aurescens TC1] Length = 150 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 3/91 (3%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 A + AQ + IP+GA K+I+ N + D AH E+ A+R R S Sbjct: 15 AYQAAQKSLSEGGIPIGAALARGGKVIASGHNERVQHGDPIAHGEMSALRAAGRQTSYR- 73 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + LY TL PC MC I +I R+ G Sbjct: 74 --DTTLYTTLAPCAMCTGTIIQFKIPRVVVG 102 >gi|238006290|gb|ACR34180.1| unknown [Zea mays] Length = 130 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 21/35 (60%), Positives = 26/35 (74%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 DLYVT EPC MCA A+S+ IR +Y+G +N K GG Sbjct: 29 DLYVTCEPCIMCATALSIIGIREVYFGCANDKFGG 63 >gi|322696336|gb|EFY88130.1| CMP/dCMP deaminase, zinc-binding protein [Metarhizium acridum CQMa 102] Length = 474 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 22/44 (50%), Positives = 32/44 (72%) Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 +S+EI+ E LYVT+EPC MCA+ + I+++Y+GA N K GG Sbjct: 277 VSREIIRECILYVTVEPCVMCASLLRQLGIKKVYFGAVNDKFGG 320 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 30/53 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 F+ AL+ A+ A NE PVG V V N +I++ N ++ T HAE +AI Sbjct: 156 FIEEALDMARLALRTNETPVGCVLVHNGTVIAKGMNATNVTRNGTRHAEFMAI 208 >gi|297838959|ref|XP_002887361.1| hydrolase/ zinc ion binding protein [Arabidopsis lyrata subsp. lyrata] gi|297333202|gb|EFH63620.1| hydrolase/ zinc ion binding protein [Arabidopsis lyrata subsp. lyrata] Length = 400 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 D+++ LEPCTMCA A+ RI+R++Y NP GG+ Sbjct: 331 DIFLLLEPCTMCAMALVHQRIKRIFYAFPNPTAGGL 366 >gi|194705936|gb|ACF87052.1| unknown [Zea mays] Length = 138 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 21/35 (60%), Positives = 26/35 (74%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 DLYVT EPC MCA A+S+ IR +Y+G +N K GG Sbjct: 37 DLYVTCEPCIMCATALSIIGIREVYFGCANDKFGG 71 >gi|169627158|ref|YP_001700807.1| cytidine/deoxycytidylate deaminase [Mycobacterium abscessus ATCC 19977] gi|169239125|emb|CAM60153.1| Probable cytidine/deoxycytidylate deaminase [Mycobacterium abscessus] Length = 166 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 35/66 (53%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P + V + +++ + NR + D TAHAEILAIR C L E L +++ PC Sbjct: 21 PFATIIVKDGAVLAESPNRVAQTNDPTAHAEILAIREACTRLGTEHLAGSTIFILALPCP 80 Query: 85 MCAAAI 90 MC A+ Sbjct: 81 MCLGAL 86 >gi|324520795|gb|ADY47713.1| tRNA-specific adenosine deaminase-like protein 3 [Ascaris suum] Length = 297 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 12/111 (10%) Query: 27 GAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC---RILSQEILPEV----DLYV 78 G V V L+ I + +G R R L HA + A+ C RI +I+ + D+Y+ Sbjct: 185 GCVIVDLDGNIAAESGVRPRPL----GHAVMSAVEDLCESHRIQGSDIVQYLGTGFDVYL 240 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 T EPC+MCA A+ R+ R+++G N GG +E+ + +H ++ Sbjct: 241 THEPCSMCAMALVHFRVGRVFFGKRNANGGALESSWRIQEEKRINHHYRVF 291 >gi|312623117|ref|YP_004024730.1| riboflavin biosynthesis protein ribd [Caldicellulosiruptor kronotskyensis 2002] gi|312203584|gb|ADQ46911.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor kronotskyensis 2002] Length = 371 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 20/149 (13%) Query: 7 FMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M+ ALE A+ A+ L N VG V V N +I + ++ K HAE+LAI Sbjct: 9 YMNMALELAKEASPLVLPNP-RVGCVIVKNGTVIGKGYHQKYGEK----HAEVLAIEDAI 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + +L +YVTLEPC C AI + I+R+ +P + NG Sbjct: 64 K--NGYLLKNSTMYVTLEPCCHYGKQLPCTEAIIKSGIKRVVIATKDP--NPLVNGKGIQ 119 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 L H E+ G+ ++ + I +DFFK Sbjct: 120 ILK--QHGTEVIEGVLQKEAESINKDFFK 146 >gi|156368641|ref|XP_001627801.1| predicted protein [Nematostella vectensis] gi|156214721|gb|EDO35701.1| predicted protein [Nematostella vectensis] Length = 291 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 33/55 (60%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 DLYVT EPC MCA A+ +RIRR++Y + G + + + +T +H E++ Sbjct: 231 DLYVTQEPCVMCAMALVHSRIRRVFYSCGDSIRGALGSKYKLHTQKALNHHFEVF 285 >gi|302384487|ref|YP_003820309.1| CMP/dCMP deaminase zinc-binding protein [Clostridium saccharolyticum WM1] gi|302195115|gb|ADL02686.1| CMP/dCMP deaminase zinc-binding protein [Clostridium saccharolyticum WM1] Length = 161 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 29/53 (54%) Query: 51 TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 T HAE ++ S++ L + LY T EPC MCA AI A I R+ YG S Sbjct: 54 TGHAETQVAERASQLYSKDFLSDCTLYTTAEPCAMCAGAIYWAGIGRVVYGMS 106 >gi|332025750|gb|EGI65908.1| tRNA-specific adenosine deaminase-like protein 3 [Acromyrmex echinatior] Length = 423 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 40/69 (57%) Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 +EPC +CA A+ +R+ R++YG +N G + + T +T+ +H ++ GI E+ RQ Sbjct: 353 IEPCPLCAMALLHSRVARIFYGTANQNVGVLGSKTILHTVPGLNHRYRVWSGILERECRQ 412 Query: 140 IIQDFFKER 148 +++ R Sbjct: 413 TVEEINARR 421 >gi|226304955|ref|YP_002764913.1| deaminase [Rhodococcus erythropolis PR4] gi|226184070|dbj|BAH32174.1| putative deaminase [Rhodococcus erythropolis PR4] Length = 121 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 7/106 (6%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 +S AL+ A+ E+P+GAV +++++ RA + R L HA++ AI L Sbjct: 8 LSLALDVAREGMELGEMPIGAVVFDDDRVLGRAYTQERALGRRVVHADLQAILQADEALG 67 Query: 68 -QEILPEVDLYVTLEPCTMC-AAAISLARIRRLYYG----ASNPKG 107 E+ L V LEPC MC AAI+L + R+++ + P G Sbjct: 68 FTRASGELTLAVNLEPCLMCMGAAITLG-VSRVWFAEYATGTGPAG 112 >gi|170581814|ref|XP_001895850.1| Cytidine and deoxycytidylate deaminase zinc-binding region family protein [Brugia malayi] gi|158597081|gb|EDP35311.1| Cytidine and deoxycytidylate deaminase zinc-binding region family protein [Brugia malayi] Length = 292 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 12/94 (12%) Query: 27 GAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC---RILSQEILPEV----DLYV 78 G V V L ++++++GNRN L HA + A+ C R +IL + D+Y+ Sbjct: 180 GCVIVDLKGEVVAKSGNRNIPL----GHAVMAAVSDLCERHRTKQSDILQYLGTGFDVYL 235 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 T EPC MCA A+ R+ R++YG P G E+ Sbjct: 236 TDEPCAMCAMALVHFRVGRVFYGKRAPLDGVYES 269 >gi|118350811|ref|XP_001008684.1| Cytidine and deoxycytidylate deaminase zinc-binding region family protein [Tetrahymena thermophila] gi|89290451|gb|EAR88439.1| Cytidine and deoxycytidylate deaminase zinc-binding region family protein [Tetrahymena thermophila SB210] Length = 337 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 3/62 (4%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG---GGIENGTQFYTLATCHHSPEIYP 130 +D+++ EPC MC+ A+ +R+RR+YY NPK GG+ + + +HS ++ Sbjct: 256 LDIFIVQEPCIMCSMALIHSRVRRVYYSLKNPKQEQFGGLNEDLMINHMDSLNHSFLVFQ 315 Query: 131 GI 132 + Sbjct: 316 NV 317 >gi|307189599|gb|EFN73960.1| tRNA-specific adenosine deaminase-like protein 3 [Camponotus floridanus] Length = 418 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 41/69 (59%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 +++ +EPC MCA A+ +R+ ++YGA N G + + +T+ +H ++ GI E+ Sbjct: 343 VFLLMEPCPMCAMALLHSRVAMIFYGAVNQNLGVLGSRAVLHTVPGLNHRYRVWSGILER 402 Query: 136 RSRQIIQDF 144 RQ++++ Sbjct: 403 ECRQMVEEI 411 >gi|294632878|ref|ZP_06711437.1| cytosine deaminase [Streptomyces sp. e14] gi|292830659|gb|EFF89009.1| cytosine deaminase [Streptomyces sp. e14] Length = 160 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 8/109 (7%) Query: 15 AQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73 A A + + P G++ A + +++ A N R D+TAH E+ R R L + Sbjct: 32 AARAVEQGDAPYGSLLAGPDGAVLAEAHNTVRRDDDITAHPELKLARWAARELDPRTAAD 91 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGAS-------NPKGGGIENGTQ 115 V +Y + +PC MCA I + I R+ Y + NP+ G TQ Sbjct: 92 VTMYTSCQPCGMCAGGILRSGIGRVVYALATDQLIELNPESGQWPTVTQ 140 >gi|325971563|ref|YP_004247754.1| CMP/dCMP deaminase zinc-binding protein [Spirochaeta sp. Buddy] gi|324026801|gb|ADY13560.1| CMP/dCMP deaminase zinc-binding protein [Spirochaeta sp. Buddy] Length = 169 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 2/93 (2%) Query: 15 AQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73 A A + P GA+ A + I+ GN E HAE L + R+ + + L Sbjct: 24 AHTAKEQGNHPFGALLADKDGNILLEQGNSYEE-GGSAMHAETLLLFKASRLYAPDFLAT 82 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 LY EPC MC A+ +RRL YG + K Sbjct: 83 CSLYTNAEPCVMCTGAMYWTNVRRLVYGITEAK 115 >gi|195952880|ref|YP_002121170.1| riboflavin biosynthesis protein RibD [Hydrogenobaculum sp. Y04AAS1] gi|195932492|gb|ACG57192.1| riboflavin biosynthesis protein RibD [Hydrogenobaculum sp. Y04AAS1] Length = 357 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + K +M ALEEA VG + V ++KI+S ++ K T HAEI+A Sbjct: 2 INKDKYYMKLALEEAYKYKGQTHPNPAVGVLIVKDDKILSIGAHK----KAGTDHAEIVA 57 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 ++ +QE + +YVTLEPC+ C AI + I+++ G+ +P Sbjct: 58 LKN-----AQEDVKGATMYVTLEPCSFHGKTPPCCPAIISSGIKKVVIGSVDPNPKVSGK 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G ++ A E+ G+ ++ ++ +DFF Sbjct: 113 GIEWLKSAGI----EVEVGVLKEECDKLNEDFF 141 >gi|311243850|ref|XP_003121217.1| PREDICTED: tRNA-specific adenosine deaminase 2 isoform 2 [Sus scrofa] Length = 152 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 14/111 (12%) Query: 48 KDVTAHAEILAIRMGCRILS---------QEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 ++ T HAE++AI ++L E+ LYVT+EPC MCAAA+ L +I + Sbjct: 27 ENATRHAEMVAID---QVLDWCHRGGKSPSEVFERTVLYVTVEPCIMCAAALRLMKIPLV 83 Query: 99 YYGASNPKGGGIENGTQFYT--LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 YG N + GG + + L + PG + + ++++ F+K+ Sbjct: 84 VYGCQNERFGGCGSVLDIASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 134 >gi|124009330|ref|ZP_01694009.1| cytosine deaminase [Microscilla marina ATCC 23134] gi|123985107|gb|EAY25051.1| cytosine deaminase [Microscilla marina ATCC 23134] Length = 144 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 3/97 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ +A+ + IP+G+V + N +II++ N+ + + H E+ + RI Sbjct: 4 FMEAAIAQAEKSYNEGGIPIGSVLMRNGEIIAQGHNKRVQEANPILHGEMDCLLNAGRIG 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 S + + +Y TL PC MCA I I+++ G S Sbjct: 64 SYK---DTVIYSTLMPCYMCAGTIVQFNIKKVVVGES 97 >gi|113868680|ref|YP_727169.1| cytosine/adenosine deaminase [Ralstonia eutropha H16] gi|113527456|emb|CAJ93801.1| Cytosine/adenosine deaminase [Ralstonia eutropha H16] Length = 169 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/100 (40%), Positives = 49/100 (49%), Gaps = 4/100 (4%) Query: 9 SCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66 S AL +A A R P A VA II+ AGN + + D T HAE++A R L Sbjct: 23 SIALSDASRA--RGRHPFAALVADQAGNIIASAGNNSMPPEGDPTQHAELVAAAQAARAL 80 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 E L + LY + EPC MCA AI I R+ Y S K Sbjct: 81 PPEQLADCTLYTSAEPCCMCAGAIYWTGIGRVVYALSEHK 120 >gi|313673619|ref|YP_004051730.1| riboflavin biosynthesis protein ribd [Calditerrivibrio nitroreducens DSM 19672] gi|312940375|gb|ADR19567.1| riboflavin biosynthesis protein RibD [Calditerrivibrio nitroreducens DSM 19672] Length = 385 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 21/128 (16%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV-DLYVTLEPCT 84 VGAV V N K+I R + + HAEI A++ E PE DLYVTLEPC+ Sbjct: 28 VGAVVVKNGKVIGRGYHTGFGM----PHAEIEALK------DCEESPEGGDLYVTLEPCS 77 Query: 85 M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 C AI + I+R++ G +P + A E++ G +E Sbjct: 78 TTGKTPPCTDAIIKSGIKRVFIGVVDPNPNHSGKAIKILNDAGI----EVFLGFNEHVCA 133 Query: 139 QIIQDFFK 146 +II+DF K Sbjct: 134 EIIEDFTK 141 >gi|310790867|gb|EFQ26400.1| cytidine and deoxycytidylate deaminase zinc-binding region [Glomerella graminicola M1.001] Length = 149 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 2/95 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 ++ A+EEA+ A +P+GA V + K++ R NR ++ H E A+ R L Sbjct: 7 LAIAIEEAKTGASEGGVPIGAALVSADGKLLGRGHNRRVQMGSAIHHGETDALFNSGR-L 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + +Y TL PC MC A L I R+ G Sbjct: 66 PGKAYKGSTMYTTLSPCDMCTGACLLYGISRVVIG 100 >gi|239624449|ref|ZP_04667480.1| cytidine/deoxycytidylate deaminase family protein [Clostridiales bacterium 1_7_47_FAA] gi|239520835|gb|EEQ60701.1| cytidine/deoxycytidylate deaminase family protein [Clostridiales bacterium 1_7_47FAA] Length = 165 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 28/53 (52%) Query: 51 TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 T HAE + S+E L + LY T EPC MCA AI A I R+ YG S Sbjct: 58 TGHAETQVAEKASQQYSKEFLKDCTLYTTAEPCAMCAGAIYWAGIGRVVYGMS 110 >gi|271964778|ref|YP_003338974.1| guanine deaminase [Streptosporangium roseum DSM 43021] gi|270507953|gb|ACZ86231.1| Guanine deaminase [Streptosporangium roseum DSM 43021] Length = 188 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 53/130 (40%), Gaps = 33/130 (25%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ A+ A + + P G V V + II+R NR D TAH E+ AIR +I Sbjct: 6 FMTEAVRLATESVMNGWGGPFGTVIVKDGDIIARGQNRVLLTGDPTAHGEVEAIRKAIQI 65 Query: 66 L-------------------------SQEILPE-------VDLYVTLEPCTMCAAAISLA 93 L S + LP LY + PC MC +AI + Sbjct: 66 LNPWAPSISEEYQNESTLTLVPRPEGSPDPLPRRAGMLLGCSLYTSGAPCPMCMSAIYWS 125 Query: 94 RIRRLYYGAS 103 RI +Y+G+ Sbjct: 126 RIDSVYFGSD 135 >gi|330903491|gb|EGH34063.1| cytosine deaminase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 125 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +P+G+V KII R NR + T H E+ A+ R + + LY TL PC Sbjct: 1 MPIGSVIGHGGKIIGRGHNRRVQEGSATKHGEMDALENAGR-QPASVYRDSVLYTTLSPC 59 Query: 84 TMCAAAISLARIRRLYYG 101 MC+ AI L IR++ G Sbjct: 60 AMCSGAILLYGIRKVIIG 77 >gi|222111201|ref|YP_002553465.1| cmp/dcmp deaminase zinc-binding [Acidovorax ebreus TPSY] gi|221730645|gb|ACM33465.1| CMP/dCMP deaminase zinc-binding [Acidovorax ebreus TPSY] Length = 155 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 45/104 (43%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + A+ A + R P GAV ++I+ N D + HAE+ A+R Sbjct: 1 MSTDTALLRRAVHLAHDNRARGGRPFGAVIARGGEVIATGVNDIVHSHDPSTHAEMQALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 R + L +Y + PC MC AA+ +A R++Y N Sbjct: 61 AATRQRANPSLAGCTVYASGHPCPMCLAALVMAGADRVFYAFDN 104 >gi|134094122|ref|YP_001099197.1| putative guanine deaminase [Herminiimonas arsenicoxydans] gi|133738025|emb|CAL61070.1| putative Guanine deaminase (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) [Herminiimonas arsenicoxydans] Length = 153 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 45/94 (47%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 A+ A+N + P GAV ++ +II+ N D T HAE+ +R + L + Sbjct: 11 AVRLAKNNHQQGGRPFGAVLTMDGEIIATGVNNIVHSHDPTTHAEMETLRAASQRLGRPN 70 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L +Y + PC MC AA+ L + +YY N Sbjct: 71 LKGSVVYASGHPCPMCLAALVLTGVDAVYYAFDN 104 >gi|157364177|ref|YP_001470944.1| CMP/dCMP deaminase zinc-binding [Thermotoga lettingae TMO] gi|157314781|gb|ABV33880.1| CMP/dCMP deaminase zinc-binding [Thermotoga lettingae TMO] Length = 209 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 9/96 (9%) Query: 24 IPVGAVAV-LNNKIISRAGNRNRE--------LKDVTAHAEILAIRMGCRILSQEILPEV 74 +P+G V V + IIS+ N E + AHAE+ A+ RI + + Sbjct: 20 LPIGCVIVNGSGNIISKGRNAIHESNFSGYPVFGNSIAHAELNALVSMKRIPDNMEISDY 79 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 +Y ++EPC MC AI ++ IR + YG + GGG+ Sbjct: 80 VIYTSMEPCVMCFGAIYMSGIRNVVYGMKDGVGGGL 115 >gi|311068845|ref|YP_003973768.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus atrophaeus 1942] gi|310869362|gb|ADP32837.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus atrophaeus 1942] Length = 363 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 17/107 (15%) Query: 7 FMSCALEEA-QNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M+ ALE A Q P VGAV V N +I+ + LK AHAE+ AI+M + Sbjct: 5 YMNTALELAKQGEGQTGSNPLVGAVVVKNGEIVGMGAH----LKYGEAHAEVHAIKMAGK 60 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + + D+YVTLEPC+ CA I + I+R++ +P Sbjct: 61 HVK-----DADIYVTLEPCSHYGKTPPCAELIITSGIKRVFVAMRDP 102 >gi|71019211|ref|XP_759836.1| hypothetical protein UM03689.1 [Ustilago maydis 521] gi|46099634|gb|EAK84867.1| hypothetical protein UM03689.1 [Ustilago maydis 521] Length = 260 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 11/92 (11%) Query: 23 EIPVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS------QEILP-- 72 + P G V +N++I NR D T H EI AI+ +L QEIL Sbjct: 63 QAPFGTAIVNTTSNELICAIANRVGSTGDPTQHGEITAIQHCTNVLQRKGLSPQEILAAW 122 Query: 73 -EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 LY EPCTMC +AI A + + YG S Sbjct: 123 KHFSLYTNAEPCTMCLSAIRWAGFKEVIYGTS 154 >gi|312794193|ref|YP_004027116.1| riboflavin biosynthesis protein ribd [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181333|gb|ADQ41503.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor kristjanssonii 177R1B] Length = 371 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 20/149 (13%) Query: 7 FMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M+ ALE A+ A+ L N VG V V N II + ++ K HAE+LAI Sbjct: 9 YMNMALELAKKASPLVLPNP-RVGCVIVKNGTIIGKGYHQKYGEK----HAEVLAIEDAI 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + +L +YV+LEPC C AI + I+++ +P NG Q Sbjct: 64 K--NGYLLKNATMYVSLEPCCHFGKQPPCTEAIIKSGIKKVVVATRDPNPLVNGNGIQIL 121 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 H E+ G+ ++ + I +DFFK Sbjct: 122 K----QHGIEVVEGVLQKEAESINKDFFK 146 >gi|322386627|ref|ZP_08060252.1| tRNA-specific adenosine deaminase [Streptococcus cristatus ATCC 51100] gi|321269300|gb|EFX52235.1| tRNA-specific adenosine deaminase [Streptococcus cristatus ATCC 51100] Length = 67 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 6/68 (8%) Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT---CHHSPEIYPGISEQRSRQII 141 MC+ AI LARI ++ YGA N K G G Y + T +H E+ G+ E+ I+ Sbjct: 1 MCSGAIGLARIPKVIYGAKNQKFGA---GGSLYDILTDERLNHRVEVESGLLEEECAAIM 57 Query: 142 QDFFKERR 149 Q+FF+ RR Sbjct: 58 QNFFRNRR 65 >gi|150864126|ref|XP_001382832.2| hypothetical protein PICST_29473 [Scheffersomyces stipitis CBS 6054] gi|149385382|gb|ABN64803.2| tRNA-specific adenosine deaminase subunit [Scheffersomyces stipitis CBS 6054] Length = 276 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 21/136 (15%) Query: 22 NEIPVGAV--AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI---LPEVDL 76 NE PV + + N+I+S N + T HAE +A++ R+ + +V L Sbjct: 25 NETPVSCLIEDIETNEILSIGYNYTNISLNGTKHAEFIAVK---RLRDSNLNIDFGKVRL 81 Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI-------Y 129 V++EPC MCA+ + I + YG SN + GG NG T+ H P + Y Sbjct: 82 IVSVEPCIMCASFLRQLGIGEVVYGCSNDRFGG--NG----TVLPIHSDPNLPQEPYCSY 135 Query: 130 PGISEQRSRQIIQDFF 145 GI + Q++++F+ Sbjct: 136 GGILRSEAIQLLRNFY 151 >gi|116669457|ref|YP_830390.1| cytosine deaminase [Arthrobacter sp. FB24] gi|116609566|gb|ABK02290.1| Cytosine deaminase [Arthrobacter sp. FB24] Length = 176 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 3/88 (3%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 IP+GA N++I+ N + D AH E+ A+R R Q+ + LY TL PC Sbjct: 42 IPIGAALARGNELIASGHNERVQHGDPIAHGEMAALRAAGR---QKSYRDTTLYTTLAPC 98 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIE 111 MC I +I R+ G + G E Sbjct: 99 AMCTGTIIQFKIPRVVVGEARTFPGEFE 126 >gi|15805630|ref|NP_294326.1| cytidine/deoxycytidylate deaminase/NUDIX/methyltransferase domain-containing protein [Deinococcus radiodurans R1] gi|6458301|gb|AAF10182.1|AE001918_7 cytidine/deoxycytidylate deaminase/nudix/methyltransferase domains protein [Deinococcus radiodurans R1] Length = 548 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 11/108 (10%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDV---------TAHAEILAIR 60 A+ EA N L P+GA V I+ R NR E + AHAEI A+ Sbjct: 12 AMSEAWNGFLYGSYPIGACIVDAQGNIVGRGRNRLGEPRRAHAGVIGGHDLAHAEINALL 71 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 + E L L T+EPC CA A++++ IR + Y A +P GG Sbjct: 72 SVPDLRRPECLSWTVL-TTVEPCPQCAGAVAMSGIRGVSYAAPDPWGG 118 >gi|297157114|gb|ADI06826.1| cytidine/deoxycytidine deaminase [Streptomyces bingchenggensis BCW-1] Length = 143 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 15 AQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73 A A + P G++ A + I++ A N R D+TAH E+ R R L + Sbjct: 17 AARAVTLGDAPYGSLLAGPDGTILAEAHNTVRRDNDITAHPELKLARWAARELDPDTAAR 76 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGAS-------NPKGGGIENGTQ 115 LY + +PC MC I + + R+ Y S NP+ G TQ Sbjct: 77 TTLYTSCQPCGMCGGGIVRSGVGRVVYALSTEQLVELNPQSGDWPTVTQ 125 >gi|222528581|ref|YP_002572463.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor bescii DSM 6725] gi|222455428|gb|ACM59690.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor bescii DSM 6725] Length = 371 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 20/149 (13%) Query: 7 FMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M+ ALE A+ A+ L N VG V V N +I + ++ K HAE+LAI Sbjct: 9 YMNMALELAKKASPLVLPNP-RVGCVIVKNGTVIGKGYHQKYGEK----HAEVLAIEDAI 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + +L +YVTLEPC C AI + I+++ +P + NG Sbjct: 64 K--NGYLLKNATMYVTLEPCCHFGKQPPCTDAIIKSGIKKVVVATKDP--NPLVNGKGIQ 119 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 L H E+ G+ ++ + I +DFFK Sbjct: 120 ILK--QHGIEVIEGVLQKEAESINKDFFK 146 >gi|255941100|ref|XP_002561319.1| Pc16g10090 [Penicillium chrysogenum Wisconsin 54-1255] gi|211585942|emb|CAP93679.1| Pc16g10090 [Penicillium chrysogenum Wisconsin 54-1255] Length = 148 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 2/102 (1%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A+EEA+ +P+GA V + KI+ R N + HAE+ A+ R L Sbjct: 10 AVEEAKQGLSEGGVPIGAALVSKDGKILGRGHNMRVQKGSAVLHAEMSALENSGR-LPAS 68 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 +Y TL PC MC A L +++R+ G + GG E Sbjct: 69 AYEGATMYTTLSPCDMCTGACILYKVKRVVIGENKNFMGGEE 110 >gi|264678844|ref|YP_003278751.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] gi|262209357|gb|ACY33455.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] Length = 146 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 47/97 (48%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A++ A L+ P GAV N++++ N D + HAE+ AIR G + + Sbjct: 1 MRMAVDLAHANRLKGGRPFGAVLAQGNEVVATGVNEIIASHDPSTHAEMQAIRAGTQKRA 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L + +Y + PC MC AA+ + ++++ N Sbjct: 61 NPSLAGLSIYASGHPCPMCLAALVMNGAEQVFFAFDN 97 >gi|86139939|ref|ZP_01058504.1| cytosine deaminase [Roseobacter sp. MED193] gi|85823357|gb|EAQ43567.1| cytosine deaminase [Roseobacter sp. MED193] Length = 147 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 3/102 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A EEA+ P+G+V +++++ N+ + D AH E+ A+R R Sbjct: 8 LLRIAYEEAKAGFDEGGCPIGSVLARGGEVVAQGRNQRVQKGDPIAHGEMDALRKAGR-- 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 Q+ + LY +L PC MC I I R+ G + GG Sbjct: 66 -QKTYRDTTLYTSLSPCMMCTGTIIQFGIPRVVIGENKNFGG 106 >gi|85090433|ref|XP_958414.1| cytosine deaminase [Neurospora crassa OR74A] gi|28919775|gb|EAA29178.1| cytosine deaminase [Neurospora crassa OR74A] Length = 159 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 43/94 (45%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 ++ A +EA+ + + IP+GA + + I+ G+ R D H A + L Sbjct: 7 LAIAFKEAKKSYEQGGIPIGAALISSTGIVLGRGHNQRVQLDSPIHHGETATLLNAGRLP 66 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 +Y TL PC MC AI L +IRR+ G Sbjct: 67 ASTYANSTMYTTLSPCDMCTGAILLYKIRRVVIG 100 >gi|320589823|gb|EFX02279.1| cmp/dcmp deaminase, zinc-binding protein [Grosmannia clavigera kw1407] Length = 178 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/52 (46%), Positives = 27/52 (51%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 HAE R+ SQ L LY T EPC MC A I A I R+ +GASN Sbjct: 68 HAEASLARLAANHYSQPYLWTCTLYSTWEPCAMCTATIYWANIGRVIFGASN 119 >gi|310644100|ref|YP_003948858.1| riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific deaminase) and 5-amino-6-(5-phosphoribosylamino)uracil reductase) [Paenibacillus polymyxa SC2] gi|309249050|gb|ADO58617.1| Riboflavin biosynthesis protein (Diaminohydroxyphosphoribosylaminopyrimidine deaminase (Riboflavin-specific deaminase) and 5-amino-6-(5-phosphoribosylamino)uracil reductase) [Paenibacillus polymyxa SC2] Length = 366 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 50/147 (34%), Positives = 69/147 (46%), Gaps = 23/147 (15%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ALE A++A + E P VG+V V N +I+ + LK HAEI A+RM Sbjct: 7 YMRLALENARSAKGQTE-PNPLVGSVIVNNGRIVGIGAH----LKPGEPHAEIHALRM-- 59 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + E +YVTLEPC+ CA AI A IRR+ A +P G Q Sbjct: 60 ---AGEHAQGATIYVTLEPCSHHGRTGPCAEAIVKAGIRRVVIAALDPNPLVSGRGVQIL 116 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ EQ S ++ + F Sbjct: 117 KDAGI----EVIVGVCEQESIRMNEVF 139 >gi|320592583|gb|EFX05013.1| tRNA-specific adenosine deaminase [Grosmannia clavigera kw1407] Length = 684 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 33/46 (71%) Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 R+++ +I+ LYVT+EPC MCA+ + I+++Y+GA+N K GG Sbjct: 431 RVVNPDIVRGCSLYVTVEPCIMCASMLRQYGIKKVYFGAANDKFGG 476 Score = 37.4 bits (85), Expect = 0.66, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 31/53 (58%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M+ A+ AQ A NE PVG V V N ++I++ N ++ T HAE++ + Sbjct: 317 YMNEAVAMAQLALRTNETPVGCVLVHNGRVIAKGMNATNMTRNGTRHAELMCL 369 >gi|331212549|ref|XP_003307544.1| tRNA-specific adenosine deaminase subunit TAD2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309297947|gb|EFP74538.1| tRNA-specific adenosine deaminase subunit TAD2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 298 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 4/76 (5%) Query: 14 EAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71 +A A + NEIPVG V V +K++S+ NR E K+ HAE AI + + + Sbjct: 158 KANEALVANEIPVGCVLVSKTTDKVLSKGRNRTNETKNACLHAEFDAIGGLHSVTPADKI 217 Query: 72 P--EVDLYVTLEPCTM 85 +V LYVT+EPC M Sbjct: 218 DWNDVKLYVTVEPCLM 233 >gi|254424276|ref|ZP_05037994.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Synechococcus sp. PCC 7335] gi|196191765|gb|EDX86729.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Synechococcus sp. PCC 7335] Length = 179 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 7/81 (8%) Query: 25 PVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 P GA+ V + ++ GN D HAE + +R S + L LY T+EP Sbjct: 47 PFGAILVAPDDQTVLMAQGN-----VDTVNHAESVLLRTAVTNFSAKYLWNCTLYTTVEP 101 Query: 83 CTMCAAAISLARIRRLYYGAS 103 C MCAA A + RL YG S Sbjct: 102 CAMCAATQYWANVGRLVYGLS 122 >gi|308070849|ref|YP_003872454.1| riboflavin biosynthesis protein ribD [Paenibacillus polymyxa E681] gi|305860128|gb|ADM71916.1| Riboflavin biosynthesis protein ribD [Paenibacillus polymyxa E681] Length = 366 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 50/147 (34%), Positives = 69/147 (46%), Gaps = 23/147 (15%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ALE A++A + E P VG+V V N +I+ + LK HAEI A+RM Sbjct: 7 YMRLALENARSAKGQTE-PNPLVGSVIVNNGRIVGIGAH----LKPGEPHAEIHALRM-- 59 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + E +YVTLEPC+ CA AI A IRR+ A +P G Q Sbjct: 60 ---AGEHAQGATIYVTLEPCSHHGRTGPCAEAIVKAGIRRVVIAALDPNPLVSGRGVQIL 116 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ EQ S ++ + F Sbjct: 117 KDAGI----EVIVGVCEQESIRMNEVF 139 >gi|226308791|ref|YP_002768751.1| cytosine deaminase [Rhodococcus erythropolis PR4] gi|229489217|ref|ZP_04383083.1| cytosine deaminase [Rhodococcus erythropolis SK121] gi|226187908|dbj|BAH36012.1| putative cytosine deaminase [Rhodococcus erythropolis PR4] gi|229324721|gb|EEN90476.1| cytosine deaminase [Rhodococcus erythropolis SK121] Length = 154 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A+E+A+ +P+GA + ++++ NR ++ H E I R L Sbjct: 11 FLGLAIEQAKIGWEEGGVPIGAALIHRGEVLAVGRNRRVQMNSAIRHGETDCIERAGR-L 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + E LY TL PC MCA L I R+ G Sbjct: 70 PASVYRECVLYTTLSPCFMCAGTARLYEIPRIVVG 104 >gi|255561486|ref|XP_002521753.1| hydrolase, putative [Ricinus communis] gi|223538966|gb|EEF40563.1| hydrolase, putative [Ricinus communis] Length = 423 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 D+Y+ EPCTMCA A+ RIRR+++ NP G + Sbjct: 347 DIYMVWEPCTMCAMALVHQRIRRIFFAFPNPNAGAL 382 >gi|315504158|ref|YP_004083045.1| cmp/dcmp deaminase zinc-binding protein [Micromonospora sp. L5] gi|315410777|gb|ADU08894.1| CMP/dCMP deaminase zinc-binding protein [Micromonospora sp. L5] Length = 141 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 1/99 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A+E A A E P ++ V + ++ N KDVTAH E+ R R Sbjct: 8 FLRRAVELADRAGASGERPFASLLVGADGTVLIEDHNTVVSDKDVTAHPELKLARWAARQ 67 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L+ E +Y + +PC MC AI+ + + R+ Y S Sbjct: 68 LAPEAAVATTMYTSCQPCPMCTVAINASGLGRVVYALST 106 >gi|297843134|ref|XP_002889448.1| hydrolase/ zinc ion binding protein [Arabidopsis lyrata subsp. lyrata] gi|297335290|gb|EFH65707.1| hydrolase/ zinc ion binding protein [Arabidopsis lyrata subsp. lyrata] Length = 400 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 25/36 (69%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 D+++ LEPC MCA A+ RI+R++Y NP GG+ Sbjct: 331 DIFLLLEPCAMCAMALVHQRIKRIFYAFPNPTAGGL 366 >gi|254474256|ref|ZP_05087646.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Pseudovibrio sp. JE062] gi|211956630|gb|EEA91840.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Pseudovibrio sp. JE062] Length = 169 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 18/133 (13%) Query: 25 PVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P G AV +++++A + + D T H EI AIR+ P LY T EPC Sbjct: 31 PFGCAVYSSEGELLAQAYDSVIKECDPTCHGEINAIRLASETSKTRSFPGGILYSTCEPC 90 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT----------LATCHHSPE--IYPG 131 MC AA A L +GA E+ T F+ A+ PE I+ G Sbjct: 91 AMCMAATIWAGFDTLVFGAYTN-----EDATNFWPQEMNLRAKDLAASMVQRPEIAIFEG 145 Query: 132 ISEQRSRQIIQDF 144 + Q +Q+ D+ Sbjct: 146 VERQACQQLFTDY 158 >gi|257388119|ref|YP_003177892.1| CMP/dCMP deaminase zinc-binding [Halomicrobium mukohataei DSM 12286] gi|257170426|gb|ACV48185.1| CMP/dCMP deaminase zinc-binding [Halomicrobium mukohataei DSM 12286] Length = 154 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 12/130 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 + A++ A+ AA R + P G+V V +++ I+ A NR D+ H E+ R + Sbjct: 15 VQSAIDLARAAADRGDRPFGSVLVRDDEQIAAASNRVVTEDDLRRHPELDLALAAERSYT 74 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYY------------GASNPKGGGIENGTQ 115 E +Y + EPC MCA + + R+ Y G + G I +G Sbjct: 75 PEERARTVMYTSTEPCPMCAGGLRSVGLGRIVYSVGGDEIHEFTGGEPTVRSGAILDGVT 134 Query: 116 FYTLATCHHS 125 T CH + Sbjct: 135 DVTGPVCHEA 144 >gi|255715725|ref|XP_002554144.1| KLTH0E15290p [Lachancea thermotolerans] gi|238935526|emb|CAR23707.1| KLTH0E15290p [Lachancea thermotolerans] Length = 152 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 37/150 (24%), Positives = 60/150 (40%), Gaps = 13/150 (8%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAI 59 K + M A +EA +P+G + N ++ N + T H EI + Sbjct: 3 KWDGLGMEIAYKEAAKGMEEGGVPIGGCLIDNRDGTVVGSGHNMRFQKGSATLHGEISTL 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYT 118 C + + LY TL PC MC AI L I R G + N KG +G ++ Sbjct: 63 E-NCGRMKGSVYKNCTLYTTLSPCDMCTGAILLYGIPRCVVGENVNFKG----DGERYLA 117 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148 C + +++ ++I++ F ER Sbjct: 118 ERGCEVRV-----VDDEKCKKIMKQFIDER 142 >gi|159465663|ref|XP_001691042.1| predicted protein [Chlamydomonas reinhardtii] gi|158279728|gb|EDP05488.1| predicted protein [Chlamydomonas reinhardtii] Length = 93 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 14/79 (17%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-----NGTQFYTLATCHHSPEIY 129 +LYVT+EPC MCA A+SL R++YYG N + GG NG C H + Sbjct: 3 ELYVTVEPCIMCAGALSLLGFRQVYYGCGNDRFGGCGSILPVNGE------GCVHVGRGF 56 Query: 130 P---GISEQRSRQIIQDFF 145 P G+ + + +++++F+ Sbjct: 57 PAQGGLFPEEAVELLREFY 75 >gi|330825753|ref|YP_004389056.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus denitrificans K601] gi|329311125|gb|AEB85540.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus denitrificans K601] Length = 163 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 39/80 (48%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV + + ++ N + D +AHAE+ A+R R L +Y + PC Sbjct: 32 PFGAVIARDGRQLATGVNETHQTCDPSAHAEMQALREATRARRDASLAGCSVYASGHPCP 91 Query: 85 MCAAAISLARIRRLYYGASN 104 MC AA+ +A R+++ N Sbjct: 92 MCLAALVMAGAERVFFAFDN 111 >gi|319762326|ref|YP_004126263.1| cmp/dcmp deaminase zinc-binding protein [Alicycliphilus denitrificans BC] gi|317116887|gb|ADU99375.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus denitrificans BC] Length = 163 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 39/80 (48%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV + + ++ N + D +AHAE+ A+R R L +Y + PC Sbjct: 32 PFGAVIARDGRQLATGVNETHQTCDPSAHAEMQALREATRARRDASLAGCSVYASGHPCP 91 Query: 85 MCAAAISLARIRRLYYGASN 104 MC AA+ +A R+++ N Sbjct: 92 MCLAALVMAGAERVFFAFDN 111 >gi|227818281|ref|YP_002822252.1| cytidine/deoxycytidylate deaminase family protein [Sinorhizobium fredii NGR234] gi|227337280|gb|ACP21499.1| cytidine/deoxycytidylate deaminase family protein [Sinorhizobium fredii NGR234] Length = 164 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 4/96 (4%) Query: 11 ALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAE-ILAIRMGCRILS 67 A + A+ + + P G++ N ++ + + E D TAHAE +LA R G + Sbjct: 16 AFDVARRSREGGDHPFGSILADRDGNVLLEQCNGYSSEGGDRTAHAERLLATRAG-KSYD 74 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + L E +Y + EPC MC+ AI A I R+ +G S Sbjct: 75 LDFLAECTMYTSAEPCAMCSGAIYWAGIGRVVFGLS 110 >gi|187608406|ref|NP_001119919.1| hypothetical protein LOC791769 [Danio rerio] gi|169145700|emb|CAQ15728.1| novel protein similar to vertebrate tRNA-specific adenosine deaminase 3 (ADAT3) [Danio rerio] Length = 336 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132 DLYVT EPC MCA A+ +RI R++YGAS G + + + +H E++ G+ Sbjct: 269 DLYVTREPCVMCAMALVHSRISRVFYGAST-ADGAFGSRYKIHCQKDLNHRFEVFKGV 325 >gi|22204218|emb|CAD43470.1| novel protein [Danio rerio] Length = 336 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132 DLYVT EPC MCA A+ +RI R++YGAS G + + + +H E++ G+ Sbjct: 269 DLYVTREPCVMCAMALVHSRISRVFYGAST-ADGAFGSRYKIHCQKDLNHRFEVFKGV 325 >gi|290954851|ref|YP_003486033.1| nucleotide deaminase [Streptomyces scabiei 87.22] gi|260644377|emb|CBG67462.1| putative nucleotide deaminase [Streptomyces scabiei 87.22] Length = 182 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 32/111 (28%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL------------------ 66 P GAV + + +IISR NR D TAHAE+ AIR + L Sbjct: 19 PFGAVIIRDGEIISRGQNRVLLTGDPTAHAEVEAIRKAVQRLNPEAPSISEEHQNESTLA 78 Query: 67 -------SQEILPE-------VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 S + +PE +Y++ PC MC +AI +RI +Y+ + Sbjct: 79 YVSRPEGSPDPVPERARMLMGCSIYISGAPCPMCMSAIYWSRIDAVYFASD 129 >gi|118593750|ref|ZP_01551119.1| hypothetical protein SIAM614_03553 [Stappia aggregata IAM 12614] gi|118433660|gb|EAV40323.1| hypothetical protein SIAM614_03553 [Stappia aggregata IAM 12614] Length = 189 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 2/96 (2%) Query: 11 ALEEAQNAALRNEIPVGAV-AVLNNKIISRAGN-RNRELKDVTAHAEILAIRMGCRILSQ 68 A E A+ A + P G + A + ++ GN + E +D+TAHAE L + Sbjct: 41 AFEIARQARETGDHPFGCLLAGPDGDVLMEQGNGYSAEGQDMTAHAERLLATRASKRWRP 100 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 + L LY + EPC MC+ A+ A I R+ +G + Sbjct: 101 DFLAGCTLYTSAEPCAMCSGAVYWAGIGRVVFGQTE 136 >gi|121702783|ref|XP_001269656.1| cytosine deaminase, putative [Aspergillus clavatus NRRL 1] gi|119397799|gb|EAW08230.1| cytosine deaminase, putative [Aspergillus clavatus NRRL 1] Length = 148 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 2/102 (1%) Query: 11 ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A+EEA+ +P+GA V + KI+ R N + HAE+ A+ R L Sbjct: 10 AVEEAKKGLAEGGVPIGAALVSKDGKILGRGHNMRVQKGSAVLHAEMAALEDSGR-LPGS 68 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 +Y TL PC MC A L ++R+ G + GG E Sbjct: 69 AYEGATMYTTLSPCDMCTGACILYNVKRVVIGENKNFVGGEE 110 >gi|52627172|ref|NP_001005300.1| tRNA-specific adenosine deaminase-like protein 3 [Danio rerio] gi|147742915|sp|Q8JFW4|ADAT3_DANRE RecName: Full=tRNA-specific adenosine deaminase-like protein 3; AltName: Full=tRNA-specific adenosine-34 deaminase subunit adat3 gi|22204386|emb|CAD43442.1| SI:dZ72B14.5 (novel protein) [Danio rerio] gi|55250228|gb|AAH85551.1| Si:dkey-204g5.2 [Danio rerio] Length = 336 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132 DLYVT EPC MCA A+ +RI R++YGAS G + + + +H E++ G+ Sbjct: 269 DLYVTREPCVMCAMALVHSRISRVFYGAST-ADGAFGSRYKIHCQKDLNHRFEVFKGV 325 >gi|190347436|gb|EDK39700.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC 6260] Length = 150 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 11/142 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-VTAHAEILAIRMGCRIL 66 ++ A+EEA+ +P+G + + + G+ R KD T H EI + R L Sbjct: 9 LAIAIEEAKKGYEEGGVPIGGALISEDGTVLGRGHNLRFQKDSATLHGEISTLENAGR-L 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + +Y TL PC+MC+ A + ++R+ G EN T S Sbjct: 68 KGSVYKNCTMYTTLSPCSMCSGACIMYGVKRVVVG---------ENETFMGAEDWIRKSG 118 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 ++ Q + ++ F KER Sbjct: 119 IEVVNLNNQECKDLMAKFIKER 140 >gi|254466209|ref|ZP_05079620.1| cytosine deaminase [Rhodobacterales bacterium Y4I] gi|206687117|gb|EDZ47599.1| cytosine deaminase [Rhodobacterales bacterium Y4I] Length = 148 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 3/102 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A EEA+ P+G+V +++++ N+ + D AH E+ A+R R Sbjct: 9 LLRIAYEEAKAGFDEGGCPIGSVLARGGQVVAQGRNQRVQKGDPIAHGEMDALRKAGR-- 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 Q + LY +L PC MC+ I I R+ G + GG Sbjct: 67 -QTSYRDTVLYTSLSPCMMCSGTIVQFGIPRVVIGDTQNFGG 107 >gi|84503628|ref|ZP_01001669.1| probable deaminase [Oceanicola batsensis HTCC2597] gi|84387959|gb|EAQ01010.1| probable deaminase [Oceanicola batsensis HTCC2597] Length = 155 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 48/102 (47%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N M A++ A+ P + V + +I++ A N ++ D + HAEI AIR+ + Sbjct: 4 NDLMQRAIDLAKENVENGGWPFSTIIVKDGEILAEAVNSVQKSHDPSDHAEIAAIRIASK 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 L+ L +YV PC MC + +A++ + Y K Sbjct: 64 KLASPDLSGCTMYVVGLPCPMCLTCMIMAKLTDVVYAVDVEK 105 >gi|87131002|gb|ABD24095.1| cytosine deaminase [Clavispora lusitaniae] Length = 153 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 2/95 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A EEAQ IP+G + + I+ R N + T H EI + R L Sbjct: 9 MQIAFEEAQKGYAEGGIPIGGALIHEDGTILGRGHNMRIQKNSATLHGEISTLENAGR-L 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + +Y TL PC MC+ A + ++R+ G Sbjct: 68 PGGVYKNCTMYTTLSPCHMCSGACLMYGVKRVVLG 102 >gi|312877999|ref|ZP_07737939.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor lactoaceticus 6A] gi|311795234|gb|EFR11623.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor lactoaceticus 6A] Length = 371 Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 20/149 (13%) Query: 7 FMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M+ AL+ A+ A+ L N VG V V N II + ++ K HAE+LAI Sbjct: 9 YMNMALDLAKKASPLVLPNP-RVGCVIVKNGTIIGKGYHQKYGEK----HAEVLAIEDAI 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + +L +YV+LEPC C AI + I+++ +P NG Q Sbjct: 64 K--NGYLLKNATMYVSLEPCCHFGKQPPCTEAIIKSGIKKVVVATRDPNPLVNGNGIQIL 121 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 H E+ G+ ++ + I +DFFK Sbjct: 122 K----QHGIEVVEGVLQKEAESINKDFFK 146 >gi|94985175|ref|YP_604539.1| CMP/dCMP deaminase, zinc-binding [Deinococcus geothermalis DSM 11300] gi|94555456|gb|ABF45370.1| CMP/dCMP deaminase, zinc-binding protein [Deinococcus geothermalis DSM 11300] Length = 187 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 11/110 (10%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDV-------TAHAEILA 58 ++ AL A+ A PVGAV V ++I+R NR E + AHAE+ Sbjct: 19 YLQEALRLAREAQAAGSAPVGAVLVNAAGEVIARGRNRVGEAQTPEHVGAASVAHAEMDV 78 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 ++ L LY +LEPC MC A +L + R+ + +P GG Sbjct: 79 FFSVGKVQDAATL---TLYTSLEPCLMCGGAAALLEVGRVVWATDDPWGG 125 >gi|154333185|ref|XP_001562853.1| deaminase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134059858|emb|CAM37286.1| putative deaminase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 276 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 5/58 (8%) Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CHHSP 126 L E LYVT+EPC MC+A + RI +++G NP+ GG NGT L T C H P Sbjct: 149 LAEYVLYVTVEPCVMCSAMLLYNRIEHVFFGCRNPRFGG--NGT-VLALHTPLCLHEP 203 >gi|50554041|ref|XP_504429.1| YALI0E26543p [Yarrowia lipolytica] gi|49650298|emb|CAG80030.1| YALI0E26543p [Yarrowia lipolytica] Length = 357 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 20/39 (51%), Positives = 27/39 (69%) Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 E+ +Y T EPC MCA A++ +R+ RL Y S+P GGIE Sbjct: 279 EMHVYTTHEPCPMCAMALNHSRVGRLVYVESSPGSGGIE 317 >gi|321249831|ref|XP_003191590.1| cytosine deaminase [Cryptococcus gattii WM276] gi|317458057|gb|ADV19803.1| Cytosine deaminase, putative [Cryptococcus gattii WM276] Length = 165 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 7/121 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FMS A ++A + IP+GA V + ++IISR N +L H E+ + R Sbjct: 17 FMSVAHDQALKSRSEGGIPIGAALVHLPTSRIISRGHNNRVQLSSNVRHGEMDCLENLGR 76 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTLA 120 + + +L E ++ TL PC MC+A L +I + + GG ++NG L Sbjct: 77 V-PEGLLRECAMFTTLSPCIMCSATCILYKIPTVVLAENENFLGGEQLLVDNGVNVINLD 135 Query: 121 T 121 + Sbjct: 136 S 136 >gi|299529821|ref|ZP_07043254.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni S44] gi|298722235|gb|EFI63159.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni S44] Length = 146 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 47/97 (48%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A++ A L+ P GAV N++++ N D + HAE+ AIR G + + Sbjct: 1 MRLAVDLAHANRLQGGRPFGAVLAQGNEVVATGVNEIIVSHDPSTHAEMQAIRAGTQKRA 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L + +Y + PC MC AA+ + ++++ N Sbjct: 61 NPSLAGLSIYASGHPCPMCLAALVMNGAEQVFFAFDN 97 >gi|157123926|ref|XP_001653977.1| cytidine and deoxycytidylate deaminase zinc-binding region [Aedes aegypti] gi|108882879|gb|EAT47104.1| cytidine and deoxycytidylate deaminase zinc-binding region [Aedes aegypti] Length = 387 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 6/62 (9%) Query: 47 LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 L D++ H + LA + G + + D+Y+T EPC MCA A++ +R+RR++Y + K Sbjct: 309 LDDISPHEDNLA-KYGPYLCTG-----YDVYLTHEPCIMCAMALTHSRVRRVFYHFNTAK 362 Query: 107 GG 108 GG Sbjct: 363 GG 364 >gi|312977170|ref|ZP_07788918.1| riboflavin biosynthesis protein RibD [Lactobacillus crispatus CTV-05] gi|310895601|gb|EFQ44667.1| riboflavin biosynthesis protein RibD [Lactobacillus crispatus CTV-05] Length = 355 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 26/135 (19%) Query: 1 MKKGNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M+K N +M+ ALEEA+ +N + VGAV V N ++++ + + HAE Sbjct: 4 MEKDNFYMNLALEEAKKGRYQTWKNPM-VGAVIVKNGQVLATGYHHHYGQN----HAE-- 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----G 107 R L+ E L LYVTLEPC C+ I + I+R+ G +P G Sbjct: 57 --RDAISKLTPEQLFNSTLYVTLEPCNHYGKQPPCSDLIIKSGIKRVVVGQIDPHKLVTG 114 Query: 108 GGI----ENGTQFYT 118 GI ENG Q T Sbjct: 115 KGIAKLQENGVQVTT 129 >gi|116193885|ref|XP_001222755.1| hypothetical protein CHGG_06660 [Chaetomium globosum CBS 148.51] gi|88182573|gb|EAQ90041.1| hypothetical protein CHGG_06660 [Chaetomium globosum CBS 148.51] Length = 551 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 9/64 (14%) Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-------YTLATC 122 ++ E LYVT+EPC MCA+ + I+++Y+GA N K GG G F YT+A+ Sbjct: 344 VITECTLYVTVEPCVMCASLLRQFGIKKVYFGAVNDKFGG--TGGVFRIHKNSPYTMASA 401 Query: 123 HHSP 126 SP Sbjct: 402 PPSP 405 Score = 40.8 bits (94), Expect = 0.055, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 5/70 (7%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+ A+ A NE PVG V V ++I+R N ++ T HAE++AI +L Sbjct: 219 FMREALDMARLALKTNETPVGCVLVYKGRVIARGMNATNVTRNGTRHAELMAISA---LL 275 Query: 67 SQEILPEVDL 76 S LP+ DL Sbjct: 276 S--YLPKSDL 283 >gi|332878860|ref|ZP_08446575.1| riboflavin biosynthesis protein RibD [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683211|gb|EGJ56093.1| riboflavin biosynthesis protein RibD [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 350 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 17/126 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V N+++I + ++ AHAE+ AI + +++L E LYV+LEPC+ Sbjct: 27 VGSVIVYNDRVIGEGWH----VRAGEAHAEVRAI---ASVKDKQLLSESTLYVSLEPCSH 79 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I RI R+ G ++P G Q A C E+ G+ ++ Sbjct: 80 YGKTPPCADLIIAHRIPRVVIGCTDPFAKVAGRGIQKLREAGC----EVVVGVCQEECEA 135 Query: 140 IIQDFF 145 + + FF Sbjct: 136 LNKRFF 141 >gi|226357300|ref|YP_002787040.1| cytidine/deoxycytidylate deaminase [Deinococcus deserti VCD115] gi|226319290|gb|ACO47286.1| putative Cytidine/deoxycytidylate deaminase, zinc-binding region (CMP/dCMP deaminase, zinc-binding) [Deinococcus deserti VCD115] Length = 221 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 21/113 (18%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTA---------HAEILAIR 60 AL EA A L P+GA V +++R NR E + V A HAEI A+ Sbjct: 21 ALSEAWEAYLHGSYPIGACVVDREGHVLARGRNRLGEPRRVEAGVISGHDLAHAEINAL- 79 Query: 61 MGCRILSQEILPEVDLY-----VTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 L+ +P + Y T++PC CA AI+++ +R + Y A +P G Sbjct: 80 -----LALTDMPRPECYSWTVLTTVQPCPQCAGAIAMSAVRAVEYAAPDPWAG 127 >gi|330506583|ref|YP_004383011.1| cytosine deaminase [Methanosaeta concilii GP-6] gi|328927391|gb|AEB67193.1| cytosine deaminase [Methanosaeta concilii GP-6] Length = 154 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 3/99 (3%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 ++FM AL+EA+ + IP+GAV V +II R NR + +D HAEI +R R Sbjct: 2 DIFMQAALDEARKGSREGGIPIGAVLVEEGRIIGRGRNRRVQQRDQMMHAEIDCLR-NAR 60 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + LY TL PC MCA A+ I+++ G + Sbjct: 61 LTGG--YHNAVLYTTLMPCYMCAGAVVYFGIKKVVVGEA 97 >gi|296158395|ref|ZP_06841226.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. Ch1-1] gi|295891339|gb|EFG71126.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. Ch1-1] Length = 180 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 61/147 (41%), Gaps = 17/147 (11%) Query: 15 AQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72 A+ A L P GAV V ++ ++ GN D HAE + R+ + E L Sbjct: 39 AERATLLGHHPFGAVLVGPDQETVLMEQGN-----VDTVNHAESVLARVAALNFTPEYLW 93 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-----GGGIENGTQF----YTLATCH 123 LY ++EPC MCA + A I R+ +G + + G EN T Y C Sbjct: 94 SCTLYTSVEPCCMCAGTMYWANIGRVVFGMTEKRLLEATGDHAENPTMSVDCRYVFDHCQ 153 Query: 124 HSPEIYPGISEQRSRQI-IQDFFKERR 149 E+ ++E + + +Q F R Sbjct: 154 KPVEVIGPVAEMEAEVMGVQRRFWSSR 180 >gi|222106196|ref|YP_002546987.1| CMP/dCMP deaminase zinc-binding [Agrobacterium vitis S4] gi|221737375|gb|ACM38271.1| CMP/dCMP deaminase zinc-binding [Agrobacterium vitis S4] Length = 163 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 1/98 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ + + A A P GA+ V + +++ N +D+T HAE + + + Sbjct: 14 FLRLSFKVALRAQETGNHPFGAILVGPDGEVLMEQENAYNPTRDMTGHAERVLMTRASQA 73 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + E L + +Y + EPC MCA A A I R+ +G S Sbjct: 74 YTPERLNQCTMYTSAEPCAMCAGAAYWAGIGRVVFGLS 111 >gi|297734758|emb|CBI16992.3| unnamed protein product [Vitis vinifera] Length = 402 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 D+Y+ EPC MCA A+ RIRR++Y NP G + Sbjct: 333 DIYLVWEPCAMCAMALVHQRIRRIFYAFPNPNAGAL 368 >gi|261335602|emb|CBH18596.1| deaminase, putative [Trypanosoma brucei gambiense DAL972] Length = 365 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 34/56 (60%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 +D++V+ EPC MC+ A+ +R+RR++Y NP GG+ + + + +H ++ Sbjct: 282 MDMFVSHEPCVMCSMALVHSRVRRVFYCFPNPVHGGLGSTVSIHAIQELNHHFRVF 337 >gi|74026040|ref|XP_829586.1| deaminase [Trypanosoma brucei TREU927] gi|70834972|gb|EAN80474.1| deaminase, putative [Trypanosoma brucei] Length = 365 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 34/56 (60%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 +D++V+ EPC MC+ A+ +R+RR++Y NP GG+ + + + +H ++ Sbjct: 282 MDMFVSHEPCVMCSMALVHSRVRRVFYCFPNPVHGGLGSTVSIHAIQELNHHFRVF 337 >gi|327179698|gb|AEA30246.1| putative cytosine/adenosine deaminase [Streptomyces sp. Acta 2897] Length = 159 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 9/132 (6%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 IP V V + +I+ NR RE D TAHAE++A+R + L + EPC Sbjct: 28 IPFSGVVVGSGRILGTGFNRVREDNDPTAHAEVVALREATTKYGIHAVAGATLIASGEPC 87 Query: 84 TMCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLATCHHSPEIYP----GISEQRS 137 +C A A I + + A G + + + A PE +P + + Sbjct: 88 ALCYLAARYAGIGHIVHAADRRTAARYGFDYTSSYAVFAE---DPERWPVKVTALHLPEA 144 Query: 138 RQIIQDFFKERR 149 Q QD+ R Sbjct: 145 EQPFQDYLTMSR 156 >gi|115938354|ref|XP_001201090.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 146 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/33 (57%), Positives = 25/33 (75%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 DLY+T EPC MCA A+ +RIRR++Y S+P G Sbjct: 78 DLYITQEPCVMCAMALVHSRIRRVFYIDSHPDG 110 >gi|115931277|ref|XP_001180302.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 708 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/33 (57%), Positives = 25/33 (75%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 DLY+T EPC MCA A+ +RIRR++Y S+P G Sbjct: 640 DLYITQEPCVMCAMALVHSRIRRVFYIDSHPDG 672 >gi|221066605|ref|ZP_03542710.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] gi|220711628|gb|EED66996.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] Length = 146 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 46/97 (47%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ A L+ P GAV N++++ N D + HAE+ AIR G + + Sbjct: 1 MRLAVNLAHANRLQGGRPFGAVLAQGNEVVATGVNEIIASHDPSTHAEMQAIRAGTQQRA 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L + +Y + PC MC AA+ + ++++ N Sbjct: 61 NPSLAGLSIYASGHPCPMCLAALVMNGAEQVFFAFDN 97 >gi|271965977|ref|YP_003340173.1| cytosine/adenosine deaminase [Streptosporangium roseum DSM 43021] gi|270509152|gb|ACZ87430.1| cytosine/adenosine deaminase [Streptosporangium roseum DSM 43021] Length = 141 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 1/106 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A+E A A + P G++ + +I+ N D+TAH E+ R R Sbjct: 8 FLRRAIELAGTARAAGDPPFGSLLTGPDGSVIAEDRNTVLTDSDITAHPELKLARWAARE 67 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 L E +Y + +PC MCA AI + + R+ + S + G++ Sbjct: 68 LDPETAAATTMYTSCQPCGMCAGAIERSGLGRVVFALSTEQLTGLK 113 >gi|146416895|ref|XP_001484417.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC 6260] Length = 150 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 11/142 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-VTAHAEILAIRMGCRIL 66 ++ A+EEA+ +P+G + + + G+ R KD T H EI + R L Sbjct: 9 LAIAIEEAKKGYEEGGVPIGGALISEDGTVLGRGHNLRFQKDSATLHGEISTLENAGR-L 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + +Y TL PC+MC+ A + ++R+ G N G E+ + + + Sbjct: 68 KGSVYKNCTMYTTLSPCSMCSGACIMYGVKRVVVG-ENETFMGAEDWIRKLGIEVVN--- 123 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 ++ Q + ++ F KER Sbjct: 124 -----LNNQECKDLMAKFIKER 140 >gi|114770250|ref|ZP_01447788.1| cytosine deaminase [alpha proteobacterium HTCC2255] gi|114549087|gb|EAU51970.1| cytosine deaminase [alpha proteobacterium HTCC2255] Length = 147 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 3/105 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A EA+ P+G+V +I+S+ N+ + D AH E+ A+R R Sbjct: 8 LLRIAYNEAKLGFEEGGCPIGSVLARGAEIVSQGRNQRVQKGDPIAHGEMDALRKAGR-- 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 Q+ + LY +L PC MC I I R+ G + GG E Sbjct: 66 -QKTYRDTTLYTSLSPCMMCTGTILQFGIPRVVIGENKNFGGNEE 109 >gi|171676245|ref|XP_001903076.1| hypothetical protein [Podospora anserina S mat+] gi|170936188|emb|CAP60848.1| unnamed protein product [Podospora anserina S mat+] Length = 685 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 19/40 (47%), Positives = 29/40 (72%) Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 ++ E LYVT+EPC MCA+ + +I+++Y+GA N K GG Sbjct: 446 VIQESILYVTVEPCVMCASLLRQLKIKKVYFGAVNDKFGG 485 >gi|163735385|ref|ZP_02142819.1| cytosine deaminase [Roseobacter litoralis Och 149] gi|161391394|gb|EDQ15729.1| cytosine deaminase [Roseobacter litoralis Och 149] Length = 150 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 3/102 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A +EA+ P+G+V +++++ N+ + D AH E+ A+R R Sbjct: 11 LLRIAYDEAKAGFDEGGCPIGSVLARGGEVVAQGRNQRVQKGDPIAHGEMDALRKAGR-- 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 Q+ + LY +L PC MC I I R+ G + GG Sbjct: 69 -QKSYRDTTLYTSLSPCMMCTGTIIQFGIPRVVIGENKNFGG 109 >gi|225459965|ref|XP_002266270.1| PREDICTED: hypothetical protein, partial [Vitis vinifera] Length = 397 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 D+Y+ EPC MCA A+ RIRR++Y NP G + Sbjct: 328 DIYLVWEPCAMCAMALVHQRIRRIFYAFPNPNAGAL 363 >gi|213972523|ref|NP_001135424.1| adenosine deaminase, tRNA-specific 3, TAD3 homolog [Nasonia vitripennis] Length = 367 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 16/53 (30%), Positives = 35/53 (66%) Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 ++ EPC++CA A+ +R+ R++YGA+NPK G + + +++ +H +++ Sbjct: 295 FLLQEPCSLCAMALLHSRVSRIFYGATNPKTGILGSRATLHSVPGLNHRYQVW 347 >gi|225709398|gb|ACO10545.1| tRNA-specific adenosine deaminase-like protein 3 [Caligus rogercresseyi] Length = 257 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 16/56 (28%), Positives = 36/56 (64%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 +D+Y+ EPC MC+ A+ RI+R+++ +P+ G +++ + +TL +H +++ Sbjct: 194 LDIYLKNEPCAMCSMALVHMRIKRIFFIQDSPQCGALKSRMKLHTLPGINHVFQVF 249 >gi|126178774|ref|YP_001046739.1| cytosine deaminase [Methanoculleus marisnigri JR1] gi|125861568|gb|ABN56757.1| Cytosine deaminase [Methanoculleus marisnigri JR1] Length = 140 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 49/96 (51%), Gaps = 3/96 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M CA+EEA+ IP+G+V V + +II R NR + D HAEI +R RI S Sbjct: 1 MKCAVEEAEAGLREGGIPIGSVLVRDGRIIGRGRNRRVQNDDPVLHAEIDCLRNAGRIGS 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 E LY TL PC +CA A I ++ G S Sbjct: 61 ---YAECTLYSTLMPCYLCAGAAVQFGIGKVVAGES 93 >gi|254580711|ref|XP_002496341.1| ZYRO0C16148p [Zygosaccharomyces rouxii] gi|238939232|emb|CAR27408.1| ZYRO0C16148p [Zygosaccharomyces rouxii] Length = 155 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 11/143 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A EEA N +P+G + + +++ R N + T H EI + C Sbjct: 12 MDIAYEEALIGYKENGVPIGGCLIDSRDGRVLGRGHNLRYQKNSATLHGEISTLE-NCGR 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + +Y TL PC MC AI + I R G + ++ + Y + H Sbjct: 71 LPASVYRHATMYTTLSPCDMCTGAIVMYGIPRCVIGEHD----NFKSPGEVYLESRGHQV 126 Query: 126 PEIYPGISEQRSRQIIQDFFKER 148 + ++R + +++ F ER Sbjct: 127 VV----VDDKRCKDLMKKFILER 145 >gi|148242060|ref|YP_001227217.1| putative cytosine deaminase [Synechococcus sp. RCC307] gi|147850370|emb|CAK27864.1| Putative cytosine deaminase [Synechococcus sp. RCC307] Length = 149 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 4/96 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A EA+ IP+GAV A + ++++R N+ + D T+H E IR R Sbjct: 9 LMDQARAEAELGWAEGGIPIGAVLATESGEVVARGHNQRVQNGDPTSHGETQCIRNAGR- 67 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + ++ L TL PC MCA L RR+ G Sbjct: 68 --RRDWHQLTLVTTLSPCPMCAGTAVLLGFRRVLIG 101 >gi|70733030|ref|YP_262803.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas fluorescens Pf-5] gi|68347329|gb|AAY94935.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas fluorescens Pf-5] Length = 169 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 2/96 (2%) Query: 11 ALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQ 68 +++ A+ A R P A VA + K+I+ AGN + + D T HAE+ A + + LS Sbjct: 23 SIQLAEEAKARGRHPFAALVADRDGKVIASAGNNSMPPEGDPTQHAELAAAALAAKRLSP 82 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 + L LY + EPC MCA AI I R+ Y S Sbjct: 83 QALAGCTLYTSAEPCCMCAGAIYWTGIGRVVYALSE 118 >gi|302869363|ref|YP_003838000.1| CMP/dCMP deaminase [Micromonospora aurantiaca ATCC 27029] gi|302572222|gb|ADL48424.1| CMP/dCMP deaminase zinc-binding [Micromonospora aurantiaca ATCC 27029] Length = 141 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 1/99 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A+E A A E P ++ V + ++ N KDVTAH E+ R R Sbjct: 8 FLRRAVELADRAGASGERPFASLLVGADGTVLIEDHNTVVSDKDVTAHPELKLARWAARQ 67 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L+ E ++ + +PC MC AI+ + + R+ Y S Sbjct: 68 LAPEAAVATTMFTSCQPCPMCTVAINASGLGRVVYALST 106 >gi|255071429|ref|XP_002499388.1| hypothetical protein MICPUN_112644 [Micromonas sp. RCC299] gi|226514651|gb|ACO60647.1| hypothetical protein MICPUN_112644 [Micromonas sp. RCC299] Length = 353 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ-FYTLATCHHSPEIY 129 D Y+ EPC MCA A++ +R+RR+ +GA +P G + G + T +H ++Y Sbjct: 277 DAYLVREPCVMCAMALTHSRVRRVIFGAGSPGNGALGGGKHSLHGQRTLNHHYQVY 332 >gi|186473011|ref|YP_001860353.1| CMP/dCMP deaminase zinc-binding [Burkholderia phymatum STM815] gi|184195343|gb|ACC73307.1| CMP/dCMP deaminase zinc-binding [Burkholderia phymatum STM815] Length = 180 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 7/91 (7%) Query: 15 AQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72 A+ A L P GA+ V ++ ++ GN D HAE + RM + + L Sbjct: 37 AERATLMGHHPFGAILVGPDQESVLIEQGN-----VDTVNHAESVLARMAALNFTPQYLW 91 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 LY T+EPC MCA A I R+ +G + Sbjct: 92 SCTLYTTVEPCCMCAGTAYWANIGRVVFGMT 122 >gi|66806435|ref|XP_636940.1| CMP/dCMP deaminase, zinc-binding domain-containing protein [Dictyostelium discoideum AX4] gi|60465344|gb|EAL63435.1| CMP/dCMP deaminase, zinc-binding domain-containing protein [Dictyostelium discoideum AX4] Length = 239 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 32/62 (51%) Query: 42 NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 N R++KD+T HAEI+ I+ + + LY T E C MC AI + ++ YG Sbjct: 85 NLGRQMKDLTQHAEIVVIQKANALYGISNFSDYTLYTTGESCLMCQGAILYSGFSKVVYG 144 Query: 102 AS 103 S Sbjct: 145 TS 146 >gi|220910961|ref|YP_002486270.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6] gi|219857839|gb|ACL38181.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6] Length = 160 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 3/88 (3%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 IP+GA N +I+ N + D AH E+ A+R R Q + LY TL PC Sbjct: 38 IPIGAALARNGVVIASGHNERVQNGDPIAHGEMSALRAAGR---QRSYRDTTLYTTLAPC 94 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIE 111 MC I +I R+ G + G E Sbjct: 95 AMCTGTIIQFKIPRVVVGEARTFPGEFE 122 >gi|312128288|ref|YP_003993162.1| riboflavin biosynthesis protein ribd [Caldicellulosiruptor hydrothermalis 108] gi|311778307|gb|ADQ07793.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor hydrothermalis 108] Length = 371 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 28/153 (18%) Query: 7 FMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M+ ALE A+ A+ L N VG V V N II + ++ K HAE+LAI Sbjct: 9 YMNMALELAKKASPLVLPNP-RVGCVIVKNGTIIGKGYHQKYGEK----HAEVLAIEDAI 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIENG 113 + + L +YV+LEPC C AI + I+++ +P G GI+ Sbjct: 64 K--NGYSLKNATMYVSLEPCCHFGKQPPCTEAIIKSGIKKVVIATRDPNPFVNGKGIQIL 121 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q H E+ G+ E+ + I +DFFK Sbjct: 122 KQ--------HGIEVVEGVLEKEAESINKDFFK 146 >gi|281200522|gb|EFA74740.1| hypothetical protein PPL_11771 [Polysphondylium pallidum PN500] Length = 237 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 V + NN ++ N + ++ +H EI+AI + + + + LY T EPC M Sbjct: 84 VATIYDANNNLMCSGVNTGKP--NMISHGEIVAINNCSALYNTTVFTNMTLYTTGEPCAM 141 Query: 86 CAAAISLARIRRLYYGASNPK 106 CA+A+ A + + YG +N + Sbjct: 142 CASALLWADFKTVVYGTANKR 162 >gi|260940691|ref|XP_002614645.1| hypothetical protein CLUG_05423 [Clavispora lusitaniae ATCC 42720] gi|238851831|gb|EEQ41295.1| hypothetical protein CLUG_05423 [Clavispora lusitaniae ATCC 42720] Length = 323 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/33 (57%), Positives = 24/33 (72%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 +Y T EPCTMCA A+ +RIR+L Y +PKGG Sbjct: 252 IYTTHEPCTMCAMALVHSRIRQLIYVYDHPKGG 284 >gi|317968925|ref|ZP_07970315.1| putative cytosine deaminase [Synechococcus sp. CB0205] Length = 144 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 4/96 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A EA+ IP+GAV A + I++R N+ + D T+H E IR R Sbjct: 4 LVDAARAEAERGWSEGGIPIGAVLAQEDGTIVARGHNQRVQNGDPTSHGETQCIRNPGR- 62 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + E+ L TL PC MCA L RR+ G Sbjct: 63 --RRDWRELTLVTTLSPCPMCAGTAVLLGFRRVVIG 96 >gi|187924612|ref|YP_001896254.1| CMP/dCMP deaminase zinc-binding [Burkholderia phytofirmans PsJN] gi|187715806|gb|ACD17030.1| CMP/dCMP deaminase zinc-binding [Burkholderia phytofirmans PsJN] Length = 180 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 7/91 (7%) Query: 15 AQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72 A+ A L P GAV V ++ ++ GN D HAE + R+ + E L Sbjct: 39 AERATLLGHHPFGAVLVGPDQETVLMEQGN-----VDTVNHAESVLARVAALNFTPEYLW 93 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 LY ++EPC MCA + A I R+ +G + Sbjct: 94 SCTLYTSVEPCCMCAGTMYWANIGRVVFGMT 124 >gi|294658696|ref|XP_002770827.1| DEHA2F15488p [Debaryomyces hansenii CBS767] gi|202953318|emb|CAR66350.1| DEHA2F15488p [Debaryomyces hansenii] Length = 147 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 5/103 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A EEA+ + +P+G + + I+ R N + T H EI + R L Sbjct: 9 MKIAFEEAKK---KGGVPIGGALIHEDGTILGRGHNMRFQSSSATLHGEISTLENAGR-L 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 I + +Y TL PC MC A + I+R+ G ++ GG Sbjct: 65 KGSIYKKCTMYTTLSPCHMCTGACIMYGIKRVVLGENDNFVGG 107 >gi|53749134|gb|AAU90052.1| At5g24670 [Arabidopsis thaliana] gi|55733733|gb|AAV59263.1| At5g24670 [Arabidopsis thaliana] Length = 400 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 25/36 (69%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 D+++ LEPCTMCA A+ RI+R++Y N GG+ Sbjct: 331 DIFLLLEPCTMCAMALVHQRIKRIFYAFPNTTAGGL 366 >gi|79519581|ref|NP_197855.3| catalytic/ hydrolase/ zinc ion binding [Arabidopsis thaliana] gi|332005964|gb|AED93347.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis thaliana] Length = 400 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 25/36 (69%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 D+++ LEPCTMCA A+ RI+R++Y N GG+ Sbjct: 331 DIFLLLEPCTMCAMALVHQRIKRIFYAFPNTTAGGL 366 >gi|332005965|gb|AED93348.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis thaliana] Length = 404 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 25/36 (69%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 D+++ LEPCTMCA A+ RI+R++Y N GG+ Sbjct: 335 DIFLLLEPCTMCAMALVHQRIKRIFYAFPNTTAGGL 370 >gi|110679616|ref|YP_682623.1| cytosine deaminase [Roseobacter denitrificans OCh 114] gi|109455732|gb|ABG31937.1| cytosine deaminase [Roseobacter denitrificans OCh 114] Length = 147 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 3/102 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A +EA+ P+G+V +++++ N+ + D AH E+ A+R R Sbjct: 8 MLRIAYDEAKAGFDEGGCPIGSVLARGGEVVAQGRNQRVQKGDPIAHGEMDALRKAGR-- 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 Q+ + LY +L PC MC I I R+ G + GG Sbjct: 66 -QKSYRDTTLYTSLSPCMMCTGTIIQFGIPRVVIGENRNFGG 106 >gi|290993580|ref|XP_002679411.1| purine deaminase [Naegleria gruberi] gi|284093027|gb|EFC46667.1| purine deaminase [Naegleria gruberi] Length = 203 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 2/79 (2%) Query: 25 PVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 P GA+ + N N+II A N D T HAE+ M + ++ L +Y + EP Sbjct: 64 PFGALLIDNDTNEIILEAHNTVHTENDRTRHAELNLSSMASKKYPRDYLTNCTMYTSTEP 123 Query: 83 CTMCAAAISLARIRRLYYG 101 C MCA AI I ++ Y Sbjct: 124 CIMCAGAIFWVGIGKVVYA 142 >gi|157874070|ref|XP_001685530.1| hypothetical protein [Leishmania major strain Friedlin] gi|68128602|emb|CAJ08734.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 542 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 34/56 (60%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 +DLYVT EPC MCA A+ +RI+R+++ N GG+ +++A+ +H Y Sbjct: 475 LDLYVTHEPCVMCAMALVHSRIQRVFFLFRNAVHGGLGGRYHLHSMASLNHHFSAY 530 >gi|170117507|ref|XP_001889940.1| predicted protein [Laccaria bicolor S238N-H82] gi|164635076|gb|EDQ99389.1| predicted protein [Laccaria bicolor S238N-H82] Length = 153 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 6/99 (6%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK-----IISRAGNRNRELKDVTAHAEILAIRMG 62 M A+ EAQ + IP+G+V +L N+ + G+ + E ++ I A+ Sbjct: 6 MILAISEAQMGHKQGGIPIGSVLLLPNESDAEGTFTLLGSGHNERIQKSSPTLISALENA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 R LS E+ + +Y TL PC+MC+ AI L +I R+ G Sbjct: 66 GR-LSPEVYRKSTIYTTLSPCSMCSGAILLYKIPRVVIG 103 >gi|110736606|dbj|BAF00268.1| hypothetical protein [Arabidopsis thaliana] Length = 226 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 25/36 (69%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 D+++ LEPCTMCA A+ RI+R++Y N GG+ Sbjct: 157 DIFLLLEPCTMCAMALVHQRIKRIFYAFPNTTAGGL 192 >gi|187735315|ref|YP_001877427.1| riboflavin biosynthesis protein RibD [Akkermansia muciniphila ATCC BAA-835] gi|187425367|gb|ACD04646.1| riboflavin biosynthesis protein RibD [Akkermansia muciniphila ATCC BAA-835] Length = 356 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 12/111 (10%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + +M+ A++ A N L + P VGAV V N++I ++ L HAE AI Sbjct: 11 QDDCWMNMAIKLASNGIGLTSPNPCVGAVIVHENQVIGSGFHKKAGL----PHAEREAIA 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 G + + + LYVTLEPC+ C AI R +R+ YG+ +P Sbjct: 67 DGVANGNAPLFADSTLYVTLEPCSTSGKTPPCTDAILKYRFKRVVYGSEDP 117 >gi|241956270|ref|XP_002420855.1| cytosine aminohydrolase, putative; cytosine deaminase, putative [Candida dubliniensis CD36] gi|223644198|emb|CAX41008.1| cytosine aminohydrolase, putative [Candida dubliniensis CD36] Length = 150 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVT-AHAEILAIR 60 KKG + AL++A+ + IP+G+ + ++ + G+ R K + H E+ A+ Sbjct: 6 KKG---LQIALDQAKKSYFEGGIPIGSCIISSDGTVLGQGHNERIQKHSSILHGEMSALE 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 R L + + +Y TL PC+MC AI L +R+ G Sbjct: 63 NAGR-LPGKTYKDCTIYTTLSPCSMCTGAILLYGFKRVVMG 102 >gi|209364139|ref|YP_001424993.2| guanine deaminase [Coxiella burnetii Dugway 5J108-111] gi|207082072|gb|ABS77888.2| guanine deaminase [Coxiella burnetii Dugway 5J108-111] Length = 298 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 28/125 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAG---------NRNRELKDVTAHA 54 G+ + A EEA +A P GAV V +I ++G N + + D TAHA Sbjct: 123 GDKWAKLANEEALKSAKLGSPPFGAVIV---QIDDKSGRVFRYWVDHNHSVDWHDPTAHA 179 Query: 55 EILAIRMGCRILSQEILPEVD----------------LYVTLEPCTMCAAAISLARIRRL 98 E+ IR R L+ L + +Y + EPC MC AAI A I L Sbjct: 180 EMSVIRKAARELNVTDLGHIRKEDSKLSQPSEWSHCVIYSSAEPCPMCMAAIYWAGIHYL 239 Query: 99 YYGAS 103 + A+ Sbjct: 240 VFSAT 244 >gi|108757223|ref|YP_632926.1| riboflavin biosynthesis protein RibD [Myxococcus xanthus DK 1622] gi|108461103|gb|ABF86288.1| riboflavin biosynthesis protein RibD [Myxococcus xanthus DK 1622] Length = 387 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 21/109 (19%) Query: 7 FMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-G 62 FM ALEEA R N + VGAV V +II+R ++ K +AHAE++A+ G Sbjct: 31 FMRIALEEAAKGLGRTSPNPV-VGAVLVKGGRIIARGYHK----KAGSAHAEVVALEAAG 85 Query: 63 CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 R DLY TLEPC C+ AI A +RR+ +++P Sbjct: 86 ARAKG------ADLYTTLEPCDHYGRTPPCSMAIIEAGVRRVICASADP 128 >gi|34810500|pdb|1OX7|A Chain A, Crystal Structure Of Yeast Cytosine Deaminase Apo-Enzyme: Inorganic Zinc Bound gi|34810501|pdb|1OX7|B Chain B, Crystal Structure Of Yeast Cytosine Deaminase Apo-Enzyme: Inorganic Zinc Bound Length = 161 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 15/142 (10%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A EEA +P+G ++NNK ++ R N + T H EI + C L Sbjct: 21 AYEEAALGYKEGGVPIGG-CLINNKDGSVLGRGHNXRFQKGSATLHGEISTLEN-CGRLE 78 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATCHHSP 126 ++ + LY TL PC C AI I R G + N K G ++ L T H Sbjct: 79 GKVYKDTTLYTTLSPCDXCTGAIIXYGIPRCVVGENVNFK----SKGEKY--LQTRGHEV 132 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 + + ++R ++I + F ER Sbjct: 133 VV---VDDERCKKIXKQFIDER 151 >gi|319401871|ref|NP_001187388.1| tRNA-specific adenosine deaminase-like protein 3 [Ictalurus punctatus] gi|308322883|gb|ADO28579.1| tRNA-specific adenosine deaminase-like protein 3 [Ictalurus punctatus] Length = 353 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134 +LYVT EPC MCA A+ +RI ++YG ++P G + + + +H ++Y G+ Sbjct: 285 ELYVTREPCVMCAMALVHSRISSVFYGTASPD-GALGTKYKIHCQKELNHHFDVYKGVMR 343 Query: 135 Q 135 Q Sbjct: 344 Q 344 >gi|302919326|ref|XP_003052839.1| hypothetical protein NECHADRAFT_67750 [Nectria haematococca mpVI 77-13-4] gi|256733779|gb|EEU47126.1| hypothetical protein NECHADRAFT_67750 [Nectria haematococca mpVI 77-13-4] Length = 482 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 20/44 (45%), Positives = 30/44 (68%) Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 + + I+ E LYVT+EPC MCA+ + I+++Y+GA N K GG Sbjct: 296 VDRSIVRECILYVTVEPCVMCASLLRQLGIKKVYFGAVNDKFGG 339 Score = 40.4 bits (93), Expect = 0.079, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 32/53 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 F+ AL+ A+ A NE PVG V V + K+I+R N ++ T HAEI+A+ Sbjct: 178 FIEEALDMARLALRTNETPVGCVLVHDGKVIARGMNATNVTRNGTRHAEIMAL 230 >gi|213962287|ref|ZP_03390550.1| riboflavin biosynthesis protein RibD [Capnocytophaga sputigena Capno] gi|213954953|gb|EEB66272.1| riboflavin biosynthesis protein RibD [Capnocytophaga sputigena Capno] Length = 323 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 17/126 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V + KII ++ K HAE+ AI + + +L E LYV+LEPC Sbjct: 22 VGCVIVHDGKIIGEGWHQ----KAGEPHAEVRAI---ASVKDKSLLAESTLYVSLEPCNH 74 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I RI R+ G ++P G + A C E+ G+ E+ R+ Sbjct: 75 YGKTPPCADLIITHRIPRVVIGTTDPFAKVAGRGIEKLRDAGC----EVTVGVMEKECRE 130 Query: 140 IIQDFF 145 + + FF Sbjct: 131 LNKRFF 136 >gi|254392686|ref|ZP_05007860.1| guanine deaminase [Streptomyces clavuligerus ATCC 27064] gi|326439435|ref|ZP_08214169.1| Guanine deaminase [Streptomyces clavuligerus ATCC 27064] gi|197706347|gb|EDY52159.1| guanine deaminase [Streptomyces clavuligerus ATCC 27064] Length = 187 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 30/106 (28%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS----------------- 67 P GAV N++I++R NR D TAH E+ AIR ++L+ Sbjct: 26 PFGAVITKNDEIVARGQNRVLLTGDPTAHGEVEAIRKAIQVLNPWAPSIPETHQNTSTLK 85 Query: 68 ------QEILPE-------VDLYVTLEPCTMCAAAISLARIRRLYY 100 ++LP+ ++Y + PC MC +AI +R +Y+ Sbjct: 86 LIRAEPSDLLPKRARMLKGCEIYTSGAPCPMCMSAIYWSRCDAVYF 131 >gi|156059474|ref|XP_001595660.1| hypothetical protein SS1G_03749 [Sclerotinia sclerotiorum 1980] gi|154701536|gb|EDO01275.1| hypothetical protein SS1G_03749 [Sclerotinia sclerotiorum 1980 UF-70] Length = 380 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%) Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI--ENGTQFYTLATCHHS 125 E++LY+T EPC MC+ AI +R R+ +G PK GG+ +N Y A+ ++S Sbjct: 305 ELELYMTHEPCVMCSMAIVHSRFGRVVFGHRMPKTGGLCADNLLDLYMPASMYNS 359 >gi|294810932|ref|ZP_06769575.1| Cytosine/adenosine deaminase [Streptomyces clavuligerus ATCC 27064] gi|294323531|gb|EFG05174.1| Cytosine/adenosine deaminase [Streptomyces clavuligerus ATCC 27064] Length = 206 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 31/131 (23%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M K FM+ A A + + P GAV N++I++R NR D TAH E+ AI Sbjct: 20 MAKRKKFMAEAARLATESVVNGWGGPFGAVITKNDEIVARGQNRVLLTGDPTAHGEVEAI 79 Query: 60 RMGCRILS-----------------------QEILPE-------VDLYVTLEPCTMCAAA 89 R ++L+ ++LP+ ++Y + PC MC +A Sbjct: 80 RKAIQVLNPWAPSIPETHQNTSTLKLIRAEPSDLLPKRARMLKGCEIYTSGAPCPMCMSA 139 Query: 90 ISLARIRRLYY 100 I +R +Y+ Sbjct: 140 IYWSRCDAVYF 150 >gi|157117008|ref|XP_001652931.1| cytidine and deoxycytidylate deaminase zinc-binding region [Aedes aegypti] gi|108876253|gb|EAT40478.1| cytidine and deoxycytidylate deaminase zinc-binding region [Aedes aegypti] Length = 376 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 17/34 (50%), Positives = 26/34 (76%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 D+Y+T EPC MCA A++ +R+RR++Y + KGG Sbjct: 320 DVYLTHEPCIMCAMALTHSRVRRVFYHFNTAKGG 353 >gi|260907588|ref|ZP_05915910.1| cytidine/deoxycytidylate deaminase family protein [Brevibacterium linens BL2] Length = 264 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 2/94 (2%) Query: 12 LEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQE 69 ++ A +A R P ++ V + +I+ AGN + + D T HAE+ A R++ E Sbjct: 112 IDLATDARNRGRHPFASMVVSADGTVIASAGNNSMPPEGDPTQHAELSAAAEAARMVPAE 171 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 LP LY + EPC MC AI I R+ Y S Sbjct: 172 ELPTATLYTSAEPCVMCTGAIYWTGIGRIVYALS 205 >gi|295704047|ref|YP_003597122.1| riboflavin biosynthesis protein RibD [Bacillus megaterium DSM 319] gi|294801706|gb|ADF38772.1| riboflavin biosynthesis protein RibD [Bacillus megaterium DSM 319] Length = 363 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 23/149 (15%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M+ AL+ A++ + E P VG+V V +N+I+ + LK HAEI A+RM Sbjct: 7 YMNIALQNARSTKGQTE-PNPLVGSVIVNDNRIVGIGTH----LKAGEPHAEIHALRM-- 59 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + E YVTLEPC+ CA A+ A ++++ +P NG + Sbjct: 60 ---AGEQAKGATAYVTLEPCSHHGRTGPCAEALVEAGVKKVVIATLDPNPLVAGNGVEIL 116 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ G+ E+ SRQ+ + F K Sbjct: 117 KNAGI----EVITGVCEEESRQMNEVFNK 141 >gi|330797600|ref|XP_003286847.1| hypothetical protein DICPUDRAFT_77728 [Dictyostelium purpureum] gi|325083149|gb|EGC36609.1| hypothetical protein DICPUDRAFT_77728 [Dictyostelium purpureum] Length = 476 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 1/54 (1%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 LY+T EPC MC+ A+ +RI+R+ YG+S GG+ + + +T + +H E+Y Sbjct: 406 LYLTREPCVMCSMALVHSRIKRVVYGSSGID-GGLGSYLKIHTEKSLNHRFEVY 458 >gi|316978726|gb|EFV61670.1| serine/threonine-protein phosphatase PP1 [Trichinella spiralis] Length = 537 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134 D YVT EPC MC+ A+ +RIRR++YG G + + + L + +H +++ I E Sbjct: 237 DCYVTREPCAMCSMALLHSRIRRVFYGYP-VNHGALGSAAMIHMLKSSNHRFDVFKEILE 295 Query: 135 QRSRQIIQD 143 + + +D Sbjct: 296 DVIKILAKD 304 >gi|254498335|ref|ZP_05111074.1| cytidine/deoxycytidylate deaminase [Legionella drancourtii LLAP12] gi|254352443|gb|EET11239.1| cytidine/deoxycytidylate deaminase [Legionella drancourtii LLAP12] Length = 157 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 12/142 (8%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ +E A + + P GA+ V ++K I+ ++ N H E+ I Sbjct: 8 FMTATIEIAASNPIA---PYGAIIVYDDKEILLKSVNSAHH--HPLMHGELSVIHTLFNK 62 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP-----KGGGIE-NGTQFYTL 119 + ++ LY T EPC MCAAAI A I ++ YG S P G IE T+ ++ Sbjct: 63 GFNGDVSKLSLYTTAEPCPMCAAAIYWAMIPKVVYGTSIPFLHDLFGRQIEVRATEIFSK 122 Query: 120 ATCHHSPEIYPGISEQRSRQII 141 ++ E+ G+ E Q+ Sbjct: 123 TPNFYTCELVGGVKEAECNQLF 144 >gi|47222036|emb|CAG08291.1| unnamed protein product [Tetraodon nigroviridis] Length = 306 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGIS 133 +DLYVT EPC MCA A+ +RI R++YG G + + ++ +H E++ G+ Sbjct: 241 LDLYVTREPCVMCAMALVHSRIGRVFYGTVW-SDGALGTKYKIHSQKDLNHRFEVFRGVL 299 Query: 134 EQRSRQI 140 +R ++ Sbjct: 300 GRRCEEL 306 >gi|2493560|sp|P78594|FCA1_CANAL RecName: Full=Cytosine deaminase; AltName: Full=Cytosine aminohydrolase gi|1762320|gb|AAC15782.1| cytosine deaminase [Candida albicans] Length = 150 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 22/152 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIR 60 KKG + AL++A+ + IP+G+ + ++ + G+ R K H E+ A+ Sbjct: 6 KKG---LQVALDQAKKSYSEGGIPIGSCIISSDDTVLGQGHNERIQKHSAILHGEMSALE 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQF 116 R L + + +Y TL PC+MC AI L +R+ G + G IENG + Sbjct: 63 NAGR-LPGKTYKDCTIYTTLSPCSMCTGAILLYGFKRVVMGENVNFLGNEKLLIENGVEV 121 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 L ++Q ++ F KE+ Sbjct: 122 VNL-------------NDQECIDLMAKFIKEK 140 >gi|319783713|ref|YP_004143189.1| CMP/dCMP deaminase zinc-binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169601|gb|ADV13139.1| CMP/dCMP deaminase zinc-binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 164 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Query: 25 PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P G V V +++++ R GN D HAE R E L + L T EPC Sbjct: 35 PFGCVLVGPDDRVLMRQGN-----LDTVRHAETELARRAAAAYEPEFLWQCTLVSTFEPC 89 Query: 84 TMCAAAISLARIRRLYYG 101 MCA + A I RL YG Sbjct: 90 AMCAGTMYWANIGRLVYG 107 >gi|146283237|ref|YP_001173390.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas stutzeri A1501] gi|145571442|gb|ABP80548.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas stutzeri A1501] gi|327481632|gb|AEA84942.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas stutzeri DSM 4166] Length = 156 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 3/81 (3%) Query: 25 PVGAVAV-LNNKIISRAGNRNRELKDVTAHAE-ILAIRMGCRILSQEILPEVDLYVTLEP 82 P GA+ V + +++ GN D+T HAE +L R R + E L +Y + EP Sbjct: 26 PFGAILVGPDGEVLLEQGNAYMPDHDMTGHAERVLMTRASTRY-TPEFLSRCTMYTSAEP 84 Query: 83 CTMCAAAISLARIRRLYYGAS 103 C MCA A + R+ YG S Sbjct: 85 CAMCAGAAYWVGLGRVVYGLS 105 >gi|220912199|ref|YP_002487508.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6] gi|219859077|gb|ACL39419.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6] Length = 161 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 46/94 (48%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 ++ A+ A + R P GAV V + + NR D TAHAE++AIR Sbjct: 13 YLQQAVGLATDNVDRGGGPFGAVVVTADGRVFEGVNRVTLDNDPTAHAEVVAIRAAAAGT 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + L LY + EPC +C A+ ARI R+Y+ Sbjct: 73 ANFNLQGAVLYASCEPCPLCLASALWARIDRVYF 106 >gi|322494303|emb|CBZ29602.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 547 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 33/56 (58%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 +DLYVT EPC MCA A+ +RI+R+++ N GG+ + +A+ +H Y Sbjct: 475 LDLYVTHEPCVMCAMALVHSRIQRVFFLFRNAVHGGLGGRYHVHVMASLNHHFSAY 530 >gi|325676856|ref|ZP_08156529.1| guanine deaminase [Rhodococcus equi ATCC 33707] gi|325552404|gb|EGD22093.1| guanine deaminase [Rhodococcus equi ATCC 33707] Length = 188 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 32/111 (28%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL------------------ 66 P GAV + I++R NR DVTAH EI AIR ++L Sbjct: 25 PFGAVIARDGDIVARGQNRVLLTGDVTAHGEIEAIRKAVQVLNAAAPSISREHVDESTLK 84 Query: 67 -------SQEILPE-------VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 S + +PE +++Y PC MC +AI +R+ +Y+ + Sbjct: 85 LVPRPEGSPDRVPERARMLMGMEIYTCGAPCPMCMSAIYWSRLDAVYFASD 135 >gi|254368626|ref|ZP_04984642.1| predicted protein [Francisella tularensis subsp. holarctica FSC022] gi|157121529|gb|EDO65720.1| predicted protein [Francisella tularensis subsp. holarctica FSC022] Length = 64 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 34/54 (62%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM A ++A A E+P+GAV V +++II + N+ L D TAHAEIL +R Sbjct: 11 FMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLR 64 >gi|312139695|ref|YP_004007031.1| cytidine/deoxycytidylate deaminase [Rhodococcus equi 103S] gi|311889034|emb|CBH48347.1| putative cytidine/deoxycytidylate deaminase [Rhodococcus equi 103S] Length = 194 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 32/111 (28%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL------------------ 66 P GAV + I++R NR DVTAH EI AIR ++L Sbjct: 31 PFGAVIARDGDIVARGQNRVLLTGDVTAHGEIEAIRKAVQVLNAAAPSISREHVDESTLK 90 Query: 67 -------SQEILPE-------VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 S + +PE +++Y PC MC +AI +R+ +Y+ + Sbjct: 91 LVPRPEGSPDRVPERARMLMGMEIYTCGAPCPMCMSAIYWSRLDAVYFASD 141 >gi|302761778|ref|XP_002964311.1| hypothetical protein SELMODRAFT_438667 [Selaginella moellendorffii] gi|300168040|gb|EFJ34644.1| hypothetical protein SELMODRAFT_438667 [Selaginella moellendorffii] Length = 336 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 D+Y+T EPC MCA A+ R RR+ + SNP G + G +F+ Sbjct: 271 DIYLTREPCAMCAMAMVHQRFRRVIFRTSNPDNGAL--GGKFF 311 >gi|302768607|ref|XP_002967723.1| hypothetical protein SELMODRAFT_440166 [Selaginella moellendorffii] gi|300164461|gb|EFJ31070.1| hypothetical protein SELMODRAFT_440166 [Selaginella moellendorffii] Length = 336 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 D+Y+T EPC MCA A+ R RR+ + SNP G + G +F+ Sbjct: 271 DIYLTREPCAMCAMAMVHQRFRRVIFRTSNPDNGAL--GGKFF 311 >gi|311896167|dbj|BAJ28575.1| putative deaminase [Kitasatospora setae KM-6054] Length = 146 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 1/95 (1%) Query: 11 ALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A+E A A + P G++ A + +++ A N R +D+TAH E+ R R L Sbjct: 13 AVELAARAVESGDAPYGSLLAGADGAVLAEAHNTVRRERDITAHPELKLARWAARELEPA 72 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 LY + +PC MCA A+ + + R+ + S Sbjct: 73 EAARTTLYTSCQPCGMCAGALVRSGLGRVVFALST 107 >gi|226324153|ref|ZP_03799671.1| hypothetical protein COPCOM_01931 [Coprococcus comes ATCC 27758] gi|225207702|gb|EEG90056.1| hypothetical protein COPCOM_01931 [Coprococcus comes ATCC 27758] Length = 67 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 32/56 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A+ +A+ A E+P+G V V KII R NR K+ AHAEI AI+ G Sbjct: 11 YMKEAIRQAKKAWKIEEVPIGCVIVYQGKIIGRGYNRRTTDKNPLAHAEISAIKKG 66 >gi|258651669|ref|YP_003200825.1| cytosine deaminase [Nakamurella multipartita DSM 44233] gi|258554894|gb|ACV77836.1| Cytosine deaminase [Nakamurella multipartita DSM 44233] Length = 153 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 1/105 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +++ A+ A+ IP+GA +++ +++ N+ +L H E + R L Sbjct: 10 YLAAAVRAARQGLAEGGIPIGAALIVDGGVLATGWNKRVQLGSAIRHGETDCLENAGR-L 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 + + TL PC MC AI L +I R+ G + GG E Sbjct: 69 PATVYARSVMVTTLSPCDMCTGAILLYKIPRVIVGENQTFYGGEE 113 >gi|254474243|ref|ZP_05087633.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Pseudovibrio sp. JE062] gi|211956617|gb|EEA91827.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Pseudovibrio sp. JE062] Length = 171 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 3/95 (3%) Query: 11 ALEEAQNAALRNEIPV---GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 AL E + P GA+ + ++++A NR D ++H E+ AIR C+ Sbjct: 17 ALVEYTATSFETPYPTPFGGALYGSDGTLLAQAYNRMVRECDPSSHGELNAIREACKKYQ 76 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 P LY T EPC MC A + L +GA Sbjct: 77 TRSFPGSILYATSEPCPMCMTATISIGVETLVFGA 111 >gi|317054543|ref|YP_004118568.1| CMP/dCMP deaminase zinc-binding protein [Pantoea sp. At-9b] gi|316952538|gb|ADU72012.1| CMP/dCMP deaminase zinc-binding protein [Pantoea sp. At-9b] Length = 158 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 5/78 (6%) Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-- 106 D HAE R+ S E L + LY +EPC MCA I A I R+ +G S + Sbjct: 48 DTVNHAESTLARIAATNFSAEYLWQCTLYTAVEPCCMCAGTIYWANIGRVVFGMSETRLL 107 Query: 107 ---GGGIENGTQFYTLAT 121 G EN T + AT Sbjct: 108 ACTGSHEENPTMSLSAAT 125 >gi|117620375|ref|YP_856166.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561782|gb|ABK38730.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 167 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 7/97 (7%) Query: 12 LEEAQNAALRNEI----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 LE+A AL N P A+ V +N++++ A N + D T HAE+ A+R ++ Sbjct: 27 LEQALQLALHNRRQGGRPFAALLVRDNQLVTSAVNAMHQDGDPTRHAELEALRQASQV-- 84 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L +Y + PC MC +A+ + I +YY N Sbjct: 85 -GPLAGAIVYASGHPCPMCLSALVMNGIAAVYYAFDN 120 >gi|260945269|ref|XP_002616932.1| hypothetical protein CLUG_02376 [Clavispora lusitaniae ATCC 42720] gi|238848786|gb|EEQ38250.1| hypothetical protein CLUG_02376 [Clavispora lusitaniae ATCC 42720] Length = 590 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 13/117 (11%) Query: 7 FMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALE A+ + + VGAV VL+ +++S +REL T HAE A+ Sbjct: 444 FMELALENARKCGETQTQFNVGAVLVLDGQVLSTG--HSRELPGNT-HAEQCALEKYFEK 500 Query: 66 LSQEILPE-VDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPKGGGIENGT 114 Q +PE ++Y T+EPC++ C I I+ Y G P +EN T Sbjct: 501 TGQRNVPEGTEIYTTMEPCSLRLSGNLPCVDRIIATNIKTCYVGVVEPD-TFVENNT 556 >gi|254370029|ref|ZP_04986036.1| predicted protein [Francisella tularensis subsp. tularensis FSC033] gi|151568274|gb|EDN33928.1| predicted protein [Francisella tularensis subsp. tularensis FSC033] Length = 66 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 34/54 (62%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM A ++A A E+P+GAV V +++II + N+ L D TAHAEIL +R Sbjct: 11 FMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLR 64 >gi|145299654|ref|YP_001142495.1| cytidine/deoxycytidylate deaminase [Aeromonas salmonicida subsp. salmonicida A449] gi|142852426|gb|ABO90747.1| cytidine/deoxycytidylate deaminase [Aeromonas salmonicida subsp. salmonicida A449] Length = 172 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 7/97 (7%) Query: 12 LEEAQNAALRNEI----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 LE+A AL+N P A+ V N+++++ A N D T HAE+ A+R + Sbjct: 27 LEQALQLALQNRQRGGRPFAALLVQNDRLVAGAVNAMHLEGDPTRHAELEALRQASQ--- 83 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L +Y + PC MC +A+ + IR +YY N Sbjct: 84 SGPLAGAIIYASGHPCPMCLSALVMNGIRAVYYAFDN 120 >gi|290958302|ref|YP_003489484.1| zinc-binding protein [Streptomyces scabiei 87.22] gi|260647828|emb|CBG70933.1| putative zinc-binding protein [Streptomyces scabiei 87.22] Length = 161 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 4/104 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +++ A+EEA+ IP+GA + ++ R NR + D + HAE A R R Sbjct: 9 WLATAVEEARTGLAEGGIPIGAALYGPDGTLLGRGHNRRVQDGDPSTHAETAAFRAAGR- 67 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 Q + TL PC C+ + I R+ G + GG Sbjct: 68 --QRTYRGTTMVTTLSPCWYCSGLVRQFGISRVVVGEATTFHGG 109 >gi|158315851|ref|YP_001508359.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec] gi|158111256|gb|ABW13453.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec] Length = 212 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 7/106 (6%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVT----AHAEILAIRMGCRIL 66 ALE A + L + VGA+ + I G RN+ + AHAE+ A + Sbjct: 25 ALEMAWESYLAGGVGVGAILTDSGGRIIGYG-RNQRFASASPRLLAHAEMEA--LAALPP 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++ + LY TL PC MC A+ +ARI ++ +GA +P GIE+ Sbjct: 82 GKDRAHDAVLYTTLHPCPMCLGAVVVARIGQVRFGAFDPTWLGIEH 127 >gi|296270519|ref|YP_003653151.1| cytosine deaminase [Thermobispora bispora DSM 43833] gi|296093306|gb|ADG89258.1| Cytosine deaminase [Thermobispora bispora DSM 43833] Length = 149 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+E+A+ IP+GA V + +++ NR + H E + R L Sbjct: 6 YMRLAIEQARIGLSEGGIPIGAALVADGEVLGVGRNRRVQEGSAIRHGETDCLENAGR-L 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + LY TL PC +CA A+ L I R+ G Sbjct: 65 PARVYRKSTLYTTLSPCHLCAGAVLLYGIPRVVIG 99 >gi|302419813|ref|XP_003007737.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] gi|261353388|gb|EEY15816.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] Length = 405 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 29/44 (65%) Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 + + I+ E LYVT+EPC MCA + IR++Y+GA N K GG Sbjct: 184 VPRSIIRESVLYVTVEPCVMCAGLLRQLGIRKVYFGAVNDKFGG 227 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 32/53 (60%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 FM AL+ A+ A NE PVG V V NNK+I++ N ++ T HAE +A+ Sbjct: 59 FMDQALDMARLALRTNETPVGCVIVHNNKVIAKGMNATNVTRNGTRHAEFMAV 111 >gi|154343275|ref|XP_001567583.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134064915|emb|CAM43024.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 539 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 34/56 (60%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 +D+YVT EPC MCA A+ +RI+R+++ N GG+ +++A+ +H Y Sbjct: 472 LDMYVTHEPCVMCAMALVHSRIQRVFFLFRNAVHGGLGGRYHVHSIASLNHHFRAY 527 >gi|317508050|ref|ZP_07965736.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Segniliparus rugosus ATCC BAA-974] gi|316253646|gb|EFV13030.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Segniliparus rugosus ATCC BAA-974] Length = 196 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 5/95 (5%) Query: 12 LEEAQNAALRN-EIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 + +A +AA N +P G+V V +N ++++ N N E + H E++A+ Sbjct: 54 MRKAMHAAAGNPRLPFGSVIVRTSDNAMLAKGVNHNTE--NPMWHGEVVALNDYTARHGN 111 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 +V LY T EPC MCA AI A I R+ + +S Sbjct: 112 ADWRDVTLYTTGEPCAMCAGAIIWAGIPRVVWASS 146 >gi|312081040|ref|XP_003142857.1| hypothetical protein LOAG_07276 [Loa loa] gi|307761980|gb|EFO21214.1| hypothetical protein LOAG_07276 [Loa loa] Length = 269 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 18/38 (47%), Positives = 25/38 (65%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 D+Y+T EPC MCA A+ R+ R++YG P GG E+ Sbjct: 209 DVYLTDEPCAMCAMALVHFRVGRVFYGKRTPSGGVYES 246 >gi|322501868|emb|CBZ36951.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 542 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 33/56 (58%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 +DLYVT EPC MCA A+ +RI R+++ N GG+ + + +A+ +H Y Sbjct: 475 LDLYVTHEPCVMCAMALVHSRIHRVFFLFRNAVHGGLGSRYNLHLMASLNHHFSAY 530 >gi|257455158|ref|ZP_05620396.1| riboflavin biosynthesis protein RibD [Enhydrobacter aerosaccus SK60] gi|257447491|gb|EEV22496.1| riboflavin biosynthesis protein RibD [Enhydrobacter aerosaccus SK60] Length = 359 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 25/155 (16%) Query: 7 FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +MS A+E A+ R VG V V +N+II + + HAE+ A+R Sbjct: 16 YMSRAIELAKKGRFTTRPNPSVGCVIVKDNQIIGEGFH----YQAGQPHAEVFALRQAYE 71 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIENGT 114 ++ + + YVTLEPC+ CA A+ A I R+ +P GGGI Sbjct: 72 RDAKHLQGAI-AYVTLEPCSHHGRTPPCADALIQAGISRVVIAVVDPNPKVDGGGIAKLQ 130 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 Q E+ GI EQ + Q+ + FFK R Sbjct: 131 QA--------GIEVITGICEQAAYQLNEGFFKVMR 157 >gi|149181584|ref|ZP_01860078.1| cytidine/deoxycytidylate deaminase/nudix/methyltransferase domains protein [Bacillus sp. SG-1] gi|148850698|gb|EDL64854.1| cytidine/deoxycytidylate deaminase/nudix/methyltransferase domains protein [Bacillus sp. SG-1] Length = 217 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 11/116 (9%) Query: 12 LEEAQNAALRNEIPVGA---------VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 E+A N+ P+GA +++ NK+ + + + AHAEI AI Sbjct: 13 FEQAWNSYCSGSFPIGAAITDENGDVISIGRNKVYEKVIEEGQVCNNKIAHAEINAILKI 72 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE--NGTQF 116 + + + +Y T+EPC +C AI ++ I+ +++ A + G NG + Sbjct: 73 NNLETNTNRKKYSIYSTMEPCALCFGAIVMSSIKNVHFAAGDGLAGATNLINGNDY 128 >gi|51246637|ref|YP_066521.1| riboflavin biosynthesis protein (RibD) [Desulfotalea psychrophila LSv54] gi|50877674|emb|CAG37514.1| probable riboflavin biosynthesis protein (RibD) [Desulfotalea psychrophila LSv54] Length = 401 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 23/150 (15%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL EA+ R P VGA+ V + ++ R ++ K T HAE+ A+R Sbjct: 42 YMLLALAEARRGQGRTS-PNPCVGAIIVGDGSVVGRGYHK----KAGTPHAEVHALRD-- 94 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + E YVTLEPC+ C A++ A + R+ G ++P G Q+ Sbjct: 95 ---AGEKAAGATAYVTLEPCSHTGRTPPCCVALAKAGVLRVVVGMTDPNPLVNGRGVQYL 151 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 H E+ GI E R+I + F K+ Sbjct: 152 R----DHGIEVSTGICEADCREINRPFIKK 177 >gi|146096702|ref|XP_001467899.1| hypothetical protein [Leishmania infantum JPCM5] gi|134072265|emb|CAM70970.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 542 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 33/56 (58%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 +DLYVT EPC MCA A+ +RI R+++ N GG+ + + +A+ +H Y Sbjct: 475 LDLYVTHEPCVMCAMALVHSRIHRVFFLFRNAVHGGLGSRYNLHLMASLNHHFSAY 530 >gi|119718363|ref|YP_925328.1| cytosine deaminase [Nocardioides sp. JS614] gi|119539024|gb|ABL83641.1| Cytosine deaminase [Nocardioides sp. JS614] Length = 154 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 1/105 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A+EEA+ IP+GAV + + +++ NR +L H E + R L Sbjct: 6 MLVLAVEEARRGLAEGGIPIGAVLIHDGEVLGGGHNRRVQLGSAIRHGETDCLENIGR-L 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 + + TL PC MC AI L I R+ G + GG E Sbjct: 65 PASVYARSTMVTTLSPCDMCTGAILLYGIPRVVVGENRNFLGGEE 109 >gi|38677840|emb|CAE82258.1| putative cytosine deaminase [Candida albicans] Length = 150 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 22/152 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIR 60 KKG + AL++A+ + IP+G+ + ++ + G+ R K H E+ A+ Sbjct: 6 KKG---LQIALDQAKKSYSEGGIPIGSCIISSDGTVLGQGHNERIQKHSAILHGEMSALE 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQF 116 R L + + +Y TL PC+MC AI L +R+ G + G IENG + Sbjct: 63 NAGR-LPGKTYKDCTIYTTLSPCSMCTGAILLYGFKRVVMGENVNFLGNEKLLIENGVEV 121 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 L ++Q ++ F KE+ Sbjct: 122 VNL-------------NDQECIDLMAKFIKEK 140 >gi|224456420|ref|ZP_03664893.1| zinc-binding domain-containing protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254874186|ref|ZP_05246896.1| zinc-binding domain-containing protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254840185|gb|EET18621.1| zinc-binding domain-containing protein [Francisella tularensis subsp. tularensis MA00-2987] Length = 72 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 34/54 (62%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM A ++A A E+P+GAV V +++II + N+ L D TAHAEIL +R Sbjct: 11 FMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLR 64 >gi|313675594|ref|YP_004053590.1| riboflavin biosynthesis protein ribd [Marivirga tractuosa DSM 4126] gi|312942292|gb|ADR21482.1| riboflavin biosynthesis protein RibD [Marivirga tractuosa DSM 4126] Length = 359 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 21/153 (13%) Query: 2 KKGNVFMSCALEEA---QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 K+ +FM AL+ A + A N + VG V VL+ K+I ++ K HAE++A Sbjct: 12 KQDELFMQRALQLAGYGKATASPNPM-VGCVIVLDGKVIGEGWHK----KAGEPHAEVMA 66 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 IR + + E+L YVTLEPC CA + +++++ GA +P Sbjct: 67 IR---SVENPELLKSSTAYVTLEPCAHYGKTPPCAELLVEKQLKKVVIGAVDPNPLVAGK 123 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G Q A E+ + EQ ++ + FF Sbjct: 124 GIQILKKAGI----EVESAVLEQECLEVNKAFF 152 >gi|291532792|emb|CBL05905.1| Cytosine/adenosine deaminases [Megamonas hypermegale ART12/1] Length = 158 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 1/98 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++ A+E ++ + P GA+ V I+ N + + HAE + + Sbjct: 6 YLRKAIEVSKKSREHGNTPFGAILVDGEGNILLEQENIEITESNCSGHAETSLMIKASKK 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 S++ L LY T EPC MCA AI + ++ YG S Sbjct: 66 YSKDFLWNCTLYSTAEPCAMCAGAIYWGNVGKVVYGIS 103 >gi|78222833|ref|YP_384580.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine deaminase [Geobacter metallireducens GS-15] gi|78194088|gb|ABB31855.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Geobacter metallireducens GS-15] Length = 370 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 19/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V + I+ +R K T HAE+ A+R + E+ D+YVTLEPC+ Sbjct: 29 VGCVIVRDGAIVGEGWHR----KAGTPHAEVHALRQ-----AGELARGADVYVTLEPCSH 79 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA A+ A + R++ G +P G + +A E+ GI E R+ Sbjct: 80 FGKTPPCADALVEAGVGRVFVGMVDPNPKVSGRGIERLRVAGI----EVVTGIREAECRR 135 Query: 140 IIQDFFK 146 + + F K Sbjct: 136 LNEPFVK 142 >gi|154316392|ref|XP_001557517.1| hypothetical protein BC1G_04127 [Botryotinia fuckeliana B05.10] gi|150845927|gb|EDN21120.1| hypothetical protein BC1G_04127 [Botryotinia fuckeliana B05.10] Length = 393 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 18/38 (47%), Positives = 26/38 (68%) Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 E++LY+T EPC MC+ AI +R R+ +G PK GG+ Sbjct: 307 ELELYITHEPCVMCSMAIVHSRFGRVIFGQRMPKTGGL 344 >gi|315224801|ref|ZP_07866622.1| riboflavin biosynthesis protein RibD [Capnocytophaga ochracea F0287] gi|314945204|gb|EFS97232.1| riboflavin biosynthesis protein RibD [Capnocytophaga ochracea F0287] Length = 331 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 17/126 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +II ++ K AHAE+ AI + + +LP+ +YV+LEPC Sbjct: 33 VGSVIVYEGRIIGEGWHQ----KAGEAHAEVRAI---TSVKDKSLLPKSTIYVSLEPCCH 85 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I +I R+ G ++P G + A C E+ G+ E R+ Sbjct: 86 FGKTPPCADLIIAHKIGRVVIGTTDPFAKVHGKGIEKLRNAGC----EVTVGVCEAECRE 141 Query: 140 IIQDFF 145 + + FF Sbjct: 142 LNKRFF 147 >gi|150865735|ref|XP_001385070.2| cytosine deaminase [Scheffersomyces stipitis CBS 6054] gi|149386991|gb|ABN67041.2| cytosine deaminase [Scheffersomyces stipitis CBS 6054] Length = 150 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 5/101 (4%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-VTAHAEILAIR 60 KKG M ALEEA+ +P+G + + + G+ R KD H E+ + Sbjct: 6 KKG---MQIALEEAKKGYEEGGVPIGGALISEDGTVLGRGHNMRFQKDSAILHGEMSVLE 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 R L + +Y TL PC MC+ A + I+R+ G Sbjct: 63 NAGR-LKGSVYKNCTMYTTLSPCHMCSGACLMYGIKRVVLG 102 >gi|256819357|ref|YP_003140636.1| riboflavin biosynthesis protein RibD [Capnocytophaga ochracea DSM 7271] gi|256580940|gb|ACU92075.1| riboflavin biosynthesis protein RibD [Capnocytophaga ochracea DSM 7271] Length = 331 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 17/126 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +II ++ K AHAE+ AI + + +LP+ +YV+LEPC Sbjct: 33 VGSVIVYEGRIIGEGWHQ----KAGEAHAEVRAI---TSVKDKSLLPKSTIYVSLEPCCH 85 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I +I R+ G ++P G + A C E+ G+ E R+ Sbjct: 86 FGKTPPCADLIIAHKIGRVVIGTTDPFAKVHGKGIEKLRNAGC----EVIVGVCEAECRE 141 Query: 140 IIQDFF 145 + + FF Sbjct: 142 LNKRFF 147 >gi|254567633|ref|XP_002490927.1| Cytosine deaminase, zinc metalloenzyme that catalyzes the hydrolytic deamination of cytosine to urac [Pichia pastoris GS115] gi|238030724|emb|CAY68647.1| Cytosine deaminase, zinc metalloenzyme that catalyzes the hydrolytic deamination of cytosine to urac [Pichia pastoris GS115] gi|328352537|emb|CCA38936.1| cytosine deaminase [Pichia pastoris CBS 7435] Length = 150 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 2/92 (2%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-HAEILAIRMGCRILSQE 69 AL+EAQ IP+GA V + + G+ R K + HAE+ A+ R L + Sbjct: 12 ALKEAQKGYEDGGIPIGAALVSEDGTVLGVGHNLRIQKGSSVFHAEMSALENAGR-LPGK 70 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 +Y TL PC MC+ A + I+R+ G Sbjct: 71 TYKNCTMYTTLSPCHMCSGACLMYGIKRVVLG 102 >gi|291521186|emb|CBK79479.1| Cytosine/adenosine deaminases [Coprococcus catus GD/7] Length = 159 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 3/105 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILA 58 M+ ++ A+E + + P A+ V N I+ + N E K T HAE Sbjct: 1 MQSHEAYLKRAIELSVKSRESGNTPFAALLVDKDGNIIMEQMNNEITEHK-CTGHAETQL 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + S+E L + LY T EPC MC+ AI I + Y + Sbjct: 60 VERASHAYSKEFLWDCTLYTTAEPCAMCSGAIYWGNIGHVVYAMT 104 >gi|313212488|emb|CBY36459.1| unnamed protein product [Oikopleura dioica] Length = 123 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 38/71 (53%) Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + + IL +++Y+ EPC MC+ A+S +RI+RL+Y G +TL +H Sbjct: 45 MGEYILTGLEVYMYREPCLMCSMALSHSRIKRLFYLKKCGTDGSCGTRESIHTLPALNHR 104 Query: 126 PEIYPGISEQR 136 +++ G E R Sbjct: 105 FQVFYGGFEDR 115 >gi|157865399|ref|XP_001681407.1| deaminase [Leishmania major strain Friedlin] gi|68124703|emb|CAJ02761.1| putative deaminase [Leishmania major strain Friedlin] Length = 281 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 L + LYVT+EPC MC A + RI +++G NP+ GG NGT Sbjct: 149 LADYVLYVTVEPCVMCGAMLLYNRIAHVFFGCRNPRFGG--NGT 190 >gi|254823485|ref|ZP_05228486.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium intracellulare ATCC 13950] Length = 143 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 13/141 (9%) Query: 8 MSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A EEA++ IP+G A+ + ++ R NR + D + HAE+ A R R Sbjct: 2 LDVAFEEARSGLAEGGIPIGAALFTADGVLLGRGRNRRVQQGDPSLHAEVDAFRAAGR-- 59 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 Q + TL PC C+ + I L G S GG E Q T Sbjct: 60 -QRDYRSTVMVTTLSPCWYCSGLVRQFNIGALVVGESRTFTGGHEWLAQHGVTVTV---- 114 Query: 127 EIYPGISEQRSRQIIQDFFKE 147 + + R Q++ F E Sbjct: 115 -----VDDPRCTQMMSAFIAE 130 >gi|158286349|ref|XP_308696.4| AGAP007066-PA [Anopheles gambiae str. PEST] gi|157020426|gb|EAA03932.5| AGAP007066-PA [Anopheles gambiae str. PEST] Length = 380 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 32/55 (58%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 D+Y+T EPC MCA A+ +R+RR+++ P G + + + + +H E++ Sbjct: 323 DVYLTHEPCIMCAMALVHSRVRRVFFHRPTPGRGALGTLMKLHAVKELNHHYEVF 377 >gi|309359910|emb|CAP32039.2| hypothetical protein CBG_13218 [Caenorhabditis briggsae AF16] Length = 293 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 33/55 (60%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 D+++ EPC MC+ A+ RI+RL+Y S+ G ++G Q + + +H E+Y Sbjct: 212 DVFLLNEPCAMCSMALVHFRIKRLFYVISSRNGVLKDDGWQLHLEPSINHHYEVY 266 >gi|300855387|ref|YP_003780371.1| riboflavin biosynthesis protein RibD [Clostridium ljungdahlii DSM 13528] gi|300435502|gb|ADK15269.1| riboflavin biosynthesis protein RibD [Clostridium ljungdahlii DSM 13528] Length = 372 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 15/86 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V N KII + +R AHAE+ A+R + + DLYVTLEPC+ Sbjct: 31 VGAVIVKNGKIIGKGYHRFFG----GAHAEVYALRE-----AGDNAQGADLYVTLEPCSH 81 Query: 86 ------CAAAISLARIRRLYYGASNP 105 CA AI A I+++ G+ +P Sbjct: 82 YGKTPPCAKAIVEAGIKKVVIGSVDP 107 >gi|154686573|ref|YP_001421734.1| hypothetical protein RBAM_021420 [Bacillus amyloliquefaciens FZB42] gi|154352424|gb|ABS74503.1| RibD [Bacillus amyloliquefaciens FZB42] Length = 371 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 17/107 (15%) Query: 7 FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M+ A+E A+ ++ VGAV V N +I+ + L+ AHAE+ AI M R Sbjct: 5 YMNTAIELARRGEGQTQSNPLVGAVVVKNGQIVGMGAH----LQYGEAHAEVHAIHMAGR 60 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 DLYVTLEPC+ CA I + I+R++ +P Sbjct: 61 HAKG-----ADLYVTLEPCSHYGKTPPCAELIIKSGIKRVFIAVKDP 102 >gi|325295467|ref|YP_004281981.1| riboflavin biosynthesis protein RibD [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065915|gb|ADY73922.1| riboflavin biosynthesis protein RibD [Desulfurobacterium thermolithotrophum DSM 11699] Length = 362 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 33/164 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M + FM A+ EA A R +P VGAV V + K+I+ + L HAE + Sbjct: 1 MTQDEKFMKLAISEAYKAKGRT-LPNPAVGAVIVKDGKVIATGYHERAGL----PHAESV 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKG---G 108 AI + E LYVTLEPC C+ I A I+R+ G +P G Sbjct: 56 AISK-----AGEKAKGATLYVTLEPCNHYGKTPPCSEKIIKAGIKRVVVGIRDPNPVARG 110 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 G+E + E+ G+ E+ ++I DF KE+R Sbjct: 111 GVEK--------LKNAGIEVKVGVLEKECFELIDDFIVNLKEKR 146 >gi|77919046|ref|YP_356861.1| riboflavin biosynthesis protein RibD [Pelobacter carbinolicus DSM 2380] gi|77545129|gb|ABA88691.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pelobacter carbinolicus DSM 2380] Length = 371 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 50/153 (32%), Positives = 68/153 (44%), Gaps = 31/153 (20%) Query: 7 FMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-MGC 63 FM A++ A+ R VGA+ V + +I+ R K HAEI A+R G Sbjct: 8 FMRQAIDLARRGEGRTRPNPAVGALIVKDGEIV----GRGFHPKAGQPHAEIYALREAGD 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIENG 113 R D+YVTLEPC+ CA AI A + R+Y G +P GGGI Sbjct: 64 RARG------ADMYVTLEPCSHHGRTGPCADAIIEAGLARVYVGTLDPNPQVAGGGIRK- 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q + E++ G+ E R+II F K Sbjct: 117 LQGAGI-------EVHCGVLENLCRRIIAPFAK 142 >gi|30021491|ref|NP_833122.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus cereus ATCC 14579] gi|29897046|gb|AAP10323.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus cereus ATCC 14579] Length = 302 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 25/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M + ++M ALE A+ A++ + VG+V V +N+I+ + +K HAEI Sbjct: 1 MLEHELYMKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGVGAH----MKAGEPHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 AIRM + E + +YVTLEPC+ CA AI A I+++ +P Sbjct: 55 HAIRM-----AGEQVRGATIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVS 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A E+ G+ E+ S+++ + F K Sbjct: 110 GRGIKILQDAGI----EVLVGVCEEESKKMNEVFNK 141 >gi|227893613|ref|ZP_04011418.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Lactobacillus ultunensis DSM 16047] gi|227864473|gb|EEJ71894.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Lactobacillus ultunensis DSM 16047] Length = 352 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 22/123 (17%) Query: 1 MKKGNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M+K +M+ AL+EA+ +N + VGAV V NN++++ + HAE Sbjct: 1 MEKDQYYMNLALQEAKKGRFQTWKNPM-VGAVIVKNNQVLATG----HHIHYGQNHAE-- 53 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----G 107 R L+ E L LYVTLEPC C+ I ++I+R+ G +P G Sbjct: 54 --RDAISKLTPEQLFNSTLYVTLEPCNHYGKQPPCSDLIVKSKIKRVVIGQVDPHKLVTG 111 Query: 108 GGI 110 GI Sbjct: 112 KGI 114 >gi|260778186|ref|ZP_05887079.1| putative deaminase [Vibrio coralliilyticus ATCC BAA-450] gi|260606199|gb|EEX32484.1| putative deaminase [Vibrio coralliilyticus ATCC BAA-450] Length = 159 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 3/82 (3%) Query: 24 IPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 IP A V+N+K ++ + NR E D TAHAE+ AIR CR L + L + E Sbjct: 29 IPFTAY-VVNSKGEVLGKGVNRVLENHDPTAHAEVEAIRDACRNTKSSHLRGLTLLASGE 87 Query: 82 PCTMCAAAISLARIRRLYYGAS 103 PC MC A I + Y A Sbjct: 88 PCAMCYLNALFAGISEVVYVAD 109 >gi|322489137|emb|CBZ24389.1| putative deaminase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 281 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 L + LYVT+EPC MC A + RI +++G NP+ GG NGT Sbjct: 149 LADYVLYVTVEPCVMCGAMLLYNRIAHVFFGCRNPRFGG--NGT 190 >gi|289807927|ref|ZP_06538556.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 48 Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 19/34 (55%), Positives = 24/34 (70%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 LYVTLEPC MCA A+ +RI R+ +GA + K G Sbjct: 3 LYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGA 36 >gi|332295838|ref|YP_004437761.1| riboflavin biosynthesis protein RibD [Thermodesulfobium narugense DSM 14796] gi|332178941|gb|AEE14630.1| riboflavin biosynthesis protein RibD [Thermodesulfobium narugense DSM 14796] Length = 372 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 47/149 (31%), Positives = 65/149 (43%), Gaps = 23/149 (15%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL+ A N P VG + V + KIIS+ +R HAE A++ Sbjct: 16 FMKKALDLALNGKYYTS-PNPMVGCIVVKDKKIISQGYHRAYG----EPHAEANALKPKY 70 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 S DLYVTLEPC C + I + I+R++ +P NG Sbjct: 71 IDFSG-----ADLYVTLEPCLHYGKTPSCTSKIISSGIKRVFIATLDPNPK--MNGKSVE 123 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 L + E+Y GI E+ +R I + FFK Sbjct: 124 ILK--YAGIEVYTGILEKEARFINRHFFK 150 >gi|313229170|emb|CBY23755.1| unnamed protein product [Oikopleura dioica] Length = 123 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 38/71 (53%) Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + + IL +++Y+ EPC MC+ A+S +RI+RL+Y G +TL +H Sbjct: 45 MGEYILTGLEVYMYREPCLMCSMALSHSRIKRLFYLKKCGTDGSCGTRESIHTLPALNHR 104 Query: 126 PEIYPGISEQR 136 +++ G E R Sbjct: 105 FQVFYGGFEDR 115 >gi|159901995|gb|ABX10725.1| cytidine and deoxycytidylate deaminase family protein [uncultured planctomycete 13FN] Length = 164 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 1/81 (1%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + + A NR K+ T HAEI I + + LY T EPC Sbjct: 24 PFGAVIVSSASEVIVAEGVNRSSKNPTLHAEIDVINNYAASGGTD-WHRLTLYTTAEPCP 82 Query: 85 MCAAAISLARIRRLYYGASNP 105 MC +AI + ++ + YG S P Sbjct: 83 MCMSAILWSGVKSIVYGTSIP 103 >gi|297191042|ref|ZP_06908440.1| cytidine/deoxycytidine deaminase [Streptomyces pristinaespiralis ATCC 25486] gi|197721517|gb|EDY65425.1| cytidine/deoxycytidine deaminase [Streptomyces pristinaespiralis ATCC 25486] Length = 158 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A+ A +A + P G++ V + ++ A N + D++AH E+ R R Sbjct: 24 FLRRAVAIAAHAVTLGDAPYGSLLVGPDGATLAEAHNTVQRDNDISAHPELKLARWAARE 83 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-------NPKG 107 L ++ LY + +PC MC I + + R+ Y S NP G Sbjct: 84 LDKDTASGTTLYTSCQPCGMCTGGIVRSGLGRVVYALSTEQLIELNPAG 132 >gi|326502140|dbj|BAK06562.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 418 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 D+Y+ EPCTMCA A+ R +R++Y NP G + Sbjct: 338 DIYLVWEPCTMCAMALVHQRFKRVFYAFPNPVTGAL 373 >gi|119962643|ref|YP_947330.1| guanine deaminase [Arthrobacter aurescens TC1] gi|119949502|gb|ABM08413.1| guanine deaminase [Arthrobacter aurescens TC1] Length = 160 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 39/79 (49%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + + NR D TAHAE++AIR + L LY + EPC Sbjct: 30 PFGAVVVTADGTVHEGVNRVTRDHDPTAHAEVVAIRRAAAASKRFDLTGSVLYASCEPCP 89 Query: 85 MCAAAISLARIRRLYYGAS 103 +C +A ARI +Y+ A Sbjct: 90 LCLSATLWARIGHVYFAAD 108 >gi|302559168|ref|ZP_07311510.1| cytosine deaminase [Streptomyces griseoflavus Tu4000] gi|302476786|gb|EFL39879.1| cytosine deaminase [Streptomyces griseoflavus Tu4000] Length = 152 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 4/105 (3%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +++ AL EA+ IP+GA + ++ R NR + D +AHAE A R R Sbjct: 11 AWLATALAEARAGGDEGGIPIGAALYGADGTLLGRGHNRRVQDGDPSAHAETAAFRAAGR 70 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 Q + TL PC C+ + I R+ G + GG Sbjct: 71 ---QRSYGGTTMVTTLSPCWYCSGLVRQFGISRVVIGEAATFHGG 112 >gi|91776267|ref|YP_546023.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Methylobacillus flagellatus KT] gi|91710254|gb|ABE50182.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Methylobacillus flagellatus KT] Length = 377 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 23/148 (15%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M+ AL EA L + P VG V V + K++ R + L+ HAE+ A+RM Sbjct: 19 YMNLALREAARG-LYSTSPNPRVGCVIVKDGKVVGRGAH----LRAGEPHAEVHALRMAG 73 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + YVTLEPC+ CA A+ A +RR+ +P + +G+ Sbjct: 74 GQAAGADA-----YVTLEPCSHFGRTPPCADALVKAGVRRVVAAMQDPN--PLVSGSGLK 126 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 L+T H E+ G+ E +R++ F Sbjct: 127 RLST--HGIEVAYGLLEHEARELNAGFI 152 >gi|58265046|ref|XP_569679.1| hypothetical protein CNC04270 [Cryptococcus neoformans var. neoformans JEC21] gi|57225911|gb|AAW42372.1| hypothetical protein CNC04270 [Cryptococcus neoformans var. neoformans JEC21] Length = 647 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE--NGTQFYTLATCHHSPE 127 +L + L+++ EPC MCA A+ +R+R ++Y KGGG E G ++ + H E Sbjct: 537 LLTSLSLFISHEPCVMCAMALLHSRVREVFYVFPRKKGGGFEYNEGNEYGEGSPVHQHDE 596 >gi|124265967|ref|YP_001019971.1| hypothetical protein Mpe_A0774 [Methylibium petroleiphilum PM1] gi|124258742|gb|ABM93736.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 166 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 7/81 (8%) Query: 25 PVGAV--AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 P GA+ A + +++ GN D HAE +R + E L + L T EP Sbjct: 35 PFGALLLAPDHQTVLAEQGN-----IDTVQHAEATLLRTAAAKHAPEFLWDCTLVTTFEP 89 Query: 83 CTMCAAAISLARIRRLYYGAS 103 C MCA A I R+ YGAS Sbjct: 90 CAMCAGTAYWANIGRVVYGAS 110 >gi|226508300|ref|NP_001147072.1| hydrolase/ zinc ion binding protein [Zea mays] gi|195607072|gb|ACG25366.1| hydrolase/ zinc ion binding protein [Zea mays] Length = 412 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 D+Y+ EPCTMCA A+ R +R++Y NP G + Sbjct: 339 DIYLVWEPCTMCAMALVHHRFKRVFYAFPNPVAGAL 374 >gi|146079218|ref|XP_001463726.1| deaminase [Leishmania infantum JPCM5] gi|134067813|emb|CAM66093.1| putative deaminase [Leishmania infantum JPCM5] gi|322497125|emb|CBZ32196.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 281 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 L + LYVT+EPC MC A + RI +++G NP+ GG NGT Sbjct: 149 LADYVLYVTVEPCVMCGAMLLYNRIAHVFFGCRNPRFGG--NGT 190 >gi|134109371|ref|XP_776800.1| hypothetical protein CNBC2910 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259480|gb|EAL22153.1| hypothetical protein CNBC2910 [Cryptococcus neoformans var. neoformans B-3501A] Length = 647 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE--NGTQFYTLATCHHSPE 127 +L + L+++ EPC MCA A+ +R+R ++Y KGGG E G ++ + H E Sbjct: 537 LLTSLSLFISHEPCVMCAMALLHSRVREVFYVFPRKKGGGFEYNEGNEYGEGSPVHQHDE 596 >gi|312134474|ref|YP_004001812.1| riboflavin biosynthesis protein ribd [Caldicellulosiruptor owensensis OL] gi|311774525|gb|ADQ04012.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor owensensis OL] Length = 371 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 20/149 (13%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M+ ALE A+ A+ +P VG V V N II + ++ K HAE+LAI Sbjct: 9 YMNMALELAKKASYL-VLPNPRVGCVIVKNGTIIGKGYHQKYGEK----HAEVLAIEDAI 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + L +YV+LEPC+ C AI + I+++ +P I NG Sbjct: 64 K--NGYSLKNATMYVSLEPCSHFGKQPPCTEAIIKSGIKKVVVATRDP--NPIVNGKGIQ 119 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 L H E+ G+ ++ + + ++FFK Sbjct: 120 ILK--QHGIEVVEGVLQKEAEIVNKEFFK 146 >gi|171057779|ref|YP_001790128.1| CMP/dCMP deaminase zinc-binding [Leptothrix cholodnii SP-6] gi|170775224|gb|ACB33363.1| CMP/dCMP deaminase zinc-binding [Leptothrix cholodnii SP-6] Length = 166 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 37/81 (45%), Gaps = 7/81 (8%) Query: 25 PVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 P GA VA + ++ GN D HAE + R R S L + LY T+EP Sbjct: 35 PFGALLVAADHRTVLLSQGN-----LDSVNHAEAVLAREAARRFSPAELWDCTLYTTVEP 89 Query: 83 CTMCAAAISLARIRRLYYGAS 103 C MCA A I RL +G S Sbjct: 90 CCMCAGTQYWAHIGRLVFGMS 110 >gi|299136120|ref|ZP_07029304.1| CMP/dCMP deaminase zinc-binding [Acidobacterium sp. MP5ACTX8] gi|298602244|gb|EFI58398.1| CMP/dCMP deaminase zinc-binding [Acidobacterium sp. MP5ACTX8] Length = 156 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 4/106 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A+EEA+ IP+GA + ++SR NR + D + H E A R R Sbjct: 14 MLRVAIEEARAGLAEGGIPIGAAIFRADGSLVSRGHNRRVQQDDPSIHGETDAFRRAGR- 72 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 Q+ ++ + TL PC C+ + + + G S GGIE Sbjct: 73 --QKSYRDLIMVTTLAPCFYCSGLVRQFGFQTVVVGESRTFQGGIE 116 >gi|119358266|ref|YP_912910.1| CMP/dCMP deaminase, zinc-binding [Chlorobium phaeobacteroides DSM 266] gi|119355615|gb|ABL66486.1| CMP/dCMP deaminase, zinc-binding protein [Chlorobium phaeobacteroides DSM 266] Length = 197 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 9/102 (8%) Query: 52 AHAEILAIRMGCRILSQ-----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--N 104 AHAE++AI + + LS LP+ +L + EPC MC AI + +++L +GA+ Sbjct: 82 AHAEMVAILLAQQKLSTYDLGLSSLPDHELVSSCEPCAMCFGAIIWSGVKKLVFGATGKT 141 Query: 105 PKGGGIENGTQ--FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 K G + G + + A E+ P + + + I++++ Sbjct: 142 AKAAGFDEGPKPRLWIRALEQRGIEVTPRVCCKEAEAILENY 183 >gi|326507252|dbj|BAJ95703.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 249 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 D+Y+ EPCTMCA A+ R +R++Y NP G + Sbjct: 169 DIYLVWEPCTMCAMALVHQRFKRVFYAFPNPVTGAL 204 >gi|282863790|ref|ZP_06272848.1| CMP/dCMP deaminase zinc-binding [Streptomyces sp. ACTE] gi|282561491|gb|EFB67035.1| CMP/dCMP deaminase zinc-binding [Streptomyces sp. ACTE] Length = 142 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 7/114 (6%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 + +++ N D+TAH E+ R R L E +Y + +PC MC A I Sbjct: 36 DGTVLAEERNTTLTDGDITAHPELKLARWAARELDAATAAETTMYTSCQPCEMCQAVIQR 95 Query: 93 ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A +RR+ + S + I G+ + P+ P + ++ R +++ +++ Sbjct: 96 AGLRRVVFALSGRQLLDIRPGSGLPPV------PQTGPALLDE-VRAVVEGYYR 142 >gi|302307191|ref|NP_983768.2| ADL328Cp [Ashbya gossypii ATCC 10895] gi|299788881|gb|AAS51592.2| ADL328Cp [Ashbya gossypii ATCC 10895] Length = 151 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 3/99 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A +EA +P+G + + ++ R N + T H E A+ R Sbjct: 9 MEIAYQEALQGYAEGGVPIGGCLIDQTDGTVLGRGRNMRFQRASATLHGETAALENAGR- 67 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L + LY TL PC MCA A+ L I R G ++ Sbjct: 68 LPGHVYKHCTLYTTLSPCDMCAGAVLLYGIPRCVVGEND 106 >gi|91784309|ref|YP_559515.1| putative cytidine/deoxycytidylate deaminase family protein [Burkholderia xenovorans LB400] gi|91688263|gb|ABE31463.1| Putative cytidine/deoxycytidylate deaminase family protein [Burkholderia xenovorans LB400] Length = 180 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 12/107 (11%) Query: 15 AQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72 A+ A L P GAV V ++ ++ GN D HAE + R+ + L Sbjct: 39 AERATLLGHHPFGAVLVGPDQETVLMEQGN-----VDTVNHAESVLARVAALNFTPAYLW 93 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-----GGGIENGT 114 LY ++EPC MCA + A I R+ +G + + G EN T Sbjct: 94 SCTLYTSVEPCCMCAGTMYWANIGRVVFGMTEKRLLEATGAHAENPT 140 >gi|326506166|dbj|BAJ86401.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 270 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 D+Y+ EPCTMCA A+ R +R++Y NP G + Sbjct: 190 DIYLVWEPCTMCAMALVHQRFKRVFYAFPNPVTGAL 225 >gi|118470530|ref|YP_887878.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Mycobacterium smegmatis str. MC2 155] gi|118171817|gb|ABK72713.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Mycobacterium smegmatis str. MC2 155] Length = 159 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 4/113 (3%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR-ELKDVTAHAEILAIRMGCRILSQEI 70 ++ A+ A + P G+V ++++ + +RNR + D TAH E R R L+ + Sbjct: 15 VDLAREALDDGDEPFGSV-LVDHTGTTLFEDRNRVKDGDATAHPEFAIARWAARHLTPDR 73 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG--IENGTQFYTLAT 121 +Y + E C MCAAA + + R+ Y S+ + GG E G Q +AT Sbjct: 74 RARATVYTSGEHCPMCAAAHAWVGLGRIVYATSSAQLGGWLTEWGAQAPPVAT 126 >gi|319795221|ref|YP_004156861.1| cmp/dcmp deaminase zinc-binding protein [Variovorax paradoxus EPS] gi|315597684|gb|ADU38750.1| CMP/dCMP deaminase zinc-binding protein [Variovorax paradoxus EPS] Length = 158 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 40/94 (42%), Gaps = 7/94 (7%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 A E A+ A P GAV V + I++ GN D HAE R + Sbjct: 13 ADEVARRAMAMGRHPFGAVLVAPDGETILAEQGN-----IDTVNHAEATLARHAAQNWPA 67 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 E L + L T EPC MCA A I R+ YGA Sbjct: 68 EYLWQCTLVTTFEPCAMCAGTSYWANIGRVVYGA 101 >gi|156055462|ref|XP_001593655.1| hypothetical protein SS1G_05083 [Sclerotinia sclerotiorum 1980] gi|154702867|gb|EDO02606.1| hypothetical protein SS1G_05083 [Sclerotinia sclerotiorum 1980 UF-70] Length = 188 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 2/93 (2%) Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 D HAE R+ +E L L T EPC MC+A I A I R+ Y A+N + Sbjct: 73 DQVNHAESSLARLAYSHYKKEYLWRCTLISTWEPCAMCSATIYWAHIGRIVYAATNEQLA 132 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 G+ H+ +I G +Q+ +II Sbjct: 133 GLTGPGNRENFTLKWHTRDILEG--QQKDIEII 163 >gi|123505764|ref|XP_001329053.1| Cytidine and deoxycytidylate deaminase zinc-binding region family protein [Trichomonas vaginalis G3] gi|121912003|gb|EAY16830.1| Cytidine and deoxycytidylate deaminase zinc-binding region family protein [Trichomonas vaginalis G3] Length = 264 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 25/39 (64%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 +D+Y EPC MC A+ +R+ RL++ NPK GG+ N Sbjct: 201 LDVYCYYEPCCMCTMAMVHSRVGRLFFIEPNPKYGGVMN 239 >gi|261417115|ref|YP_003250798.1| riboflavin biosynthesis protein RibD [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373571|gb|ACX76316.1| riboflavin biosynthesis protein RibD [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326859|gb|ADL26060.1| riboflavin biosynthesis protein RibD [Fibrobacter succinogenes subsp. succinogenes S85] Length = 421 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 17/107 (15%) Query: 7 FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM ALE+A A R VGAV V + ++ + R + +AHAE++A+R Sbjct: 8 FMQFALEQAFFAIGESRPNPAVGAVVVKDGIVV----GKGRTQRPGSAHAEVMALRD--- 60 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + E+ ++VTLEPC C AI A I+++Y+ S+P Sbjct: 61 --AGELARGASIFVTLEPCCHYGRTPPCTKAIIEAGIQKVYFAHSDP 105 >gi|242075038|ref|XP_002447455.1| hypothetical protein SORBIDRAFT_06g001320 [Sorghum bicolor] gi|241938638|gb|EES11783.1| hypothetical protein SORBIDRAFT_06g001320 [Sorghum bicolor] Length = 412 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 D+Y+ EPCTMCA A+ R +R++Y NP G + Sbjct: 339 DIYLVWEPCTMCAMALVHHRFKRVFYAFPNPVTGAL 374 >gi|284989444|ref|YP_003407998.1| cytosine deaminase [Geodermatophilus obscurus DSM 43160] gi|284062689|gb|ADB73627.1| Cytosine deaminase [Geodermatophilus obscurus DSM 43160] Length = 165 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 1/100 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ + A+E+A+ +P+GA V +++++ NR ++ H E I Sbjct: 17 ERDRFLLGLAVEQARIGWEEGGVPIGAALVDGDRVLAVGRNRRVQMASAIRHGETDCIER 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 R L + LY TL PC MCA L I R+ G Sbjct: 77 AGR-LPASVYRRSVLYTTLSPCLMCAGTALLYDIPRIVVG 115 >gi|150003437|ref|YP_001298181.1| riboflavin biosynthesis protein ribD [Bacteroides vulgatus ATCC 8482] gi|254881264|ref|ZP_05253974.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 4_3_47FAA] gi|149931861|gb|ABR38559.1| riboflavin biosynthesis protein ribD [Bacteroides vulgatus ATCC 8482] gi|254834057|gb|EET14366.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 4_3_47FAA] Length = 350 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 29/158 (18%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M K ++S L+ A N L N P VGAV V ++ II ++ AHAE+ Sbjct: 1 MTKDEKYISRCLQLAYNG-LCNTAPNPMVGAVIVYHDTIIGEG----YHIRCGEAHAEVN 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KG 107 AIR + + +L E +YV+LEPC+ CA I RI ++ G +P G Sbjct: 56 AIR---SVKDENLLKESTIYVSLEPCSHYGKTPPCADLIIEKRIPKVVIGCIDPYSQVAG 112 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 GIE + E+ G+ E+ R +I+ F Sbjct: 113 KGIEKLRK--------AGIEVTVGVLEEECRHLIRRFI 142 >gi|284040576|ref|YP_003390506.1| cytosine deaminase [Spirosoma linguale DSM 74] gi|283819869|gb|ADB41707.1| Cytosine deaminase [Spirosoma linguale DSM 74] Length = 144 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 3/97 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ +A+ + IP+G+ V N ++++ N+ + + H E+ + R+ Sbjct: 4 FMQEAINQARKSLSEGGIPIGSSLVKNGELVASGHNKRVQENNPILHGEMDCLNNAGRVG 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 S +Y TL PC MCA I +I ++ G S Sbjct: 64 S---FRNTVIYSTLMPCYMCAGTIVQFKIPKVIVGES 97 >gi|262340928|ref|YP_003283783.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272265|gb|ACY40173.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 343 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 57/123 (46%), Gaps = 19/123 (15%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 MK FMS A++ A+N + + P VG V N IIS + + + HAE +A Sbjct: 1 MKDKETFMSRAIQLAKNGLGMTSPNPMVGCVIERNGFIISEGWHYKKGM----DHAEAIA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108 I RI ++ + + LYVTLEPC C I I R+ G +P KG Sbjct: 57 IN---RIKNKSLFLDSTLYVTLEPCVHFGETSPCVDLIIKNHIPRIVVGIQDPHDKVKGL 113 Query: 109 GIE 111 GI+ Sbjct: 114 GIQ 116 >gi|321254023|ref|XP_003192936.1| hypothetical protein CGB_C6380W [Cryptococcus gattii WM276] gi|317459405|gb|ADV21149.1| hypothetical protein CNC04270 [Cryptococcus gattii WM276] Length = 647 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 27/42 (64%) Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 +L + L+++ EPC MCA A+ +R+R ++Y KGGG E Sbjct: 537 LLTSLSLFISHEPCVMCAMALLHSRVREVFYVFPRRKGGGFE 578 >gi|300789562|ref|YP_003769853.1| cytidine/deoxycytidine deaminase [Amycolatopsis mediterranei U32] gi|299799076|gb|ADJ49451.1| cytidine/deoxycytidine deaminase [Amycolatopsis mediterranei U32] Length = 141 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%) Query: 25 PVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P G++ A + KI++ N + D+TAH E+ R + L E ++ + +PC Sbjct: 27 PFGSLLADADGKILAEDRNTSLTDNDITAHPELKLARWAAQNLDPETAAATTMFTSTQPC 86 Query: 84 TMCAAAISLARIRRLYYGASN 104 MC AI + + R+ Y S Sbjct: 87 GMCTGAIERSGLGRVVYALST 107 >gi|328876450|gb|EGG24813.1| CMP/dCMP deaminase [Dictyostelium fasciculatum] Length = 251 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Query: 27 GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMC 86 GAV V N ++ G ++ + H EI+AI + ++ + LY T EPC MC Sbjct: 80 GAVIVNENGTLACTGVNQGKINRIN-HGEIVAINNCSNLYTKNMFEGWTLYTTGEPCPMC 138 Query: 87 AAAISLARIRRLYYGA 102 AAI + + + +G+ Sbjct: 139 QAAIMWTKFKTVVFGS 154 >gi|164659978|ref|XP_001731113.1| hypothetical protein MGL_2112 [Malassezia globosa CBS 7966] gi|159105011|gb|EDP43899.1| hypothetical protein MGL_2112 [Malassezia globosa CBS 7966] Length = 58 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 2/40 (5%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 LYVT+EPC MCA+A+ I+R+ +GA N + GG NGT Sbjct: 5 TLYVTIEPCLMCASALRQIGIQRVVFGAGNERFGG--NGT 42 >gi|298249165|ref|ZP_06972969.1| riboflavin biosynthesis protein RibD [Ktedonobacter racemifer DSM 44963] gi|297547169|gb|EFH81036.1| riboflavin biosynthesis protein RibD [Ktedonobacter racemifer DSM 44963] Length = 383 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 18/89 (20%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV--DLYVTLEP 82 PVGAV V N++I R HAEI A+R E V DLY TLEP Sbjct: 26 PVGAVLVRENQVIGRGATS----PPYGPHAEIHALR------EAETTAAVGADLYTTLEP 75 Query: 83 CTM------CAAAISLARIRRLYYGASNP 105 C + C AAI A I+R+ G+ +P Sbjct: 76 CCITVHTPPCTAAIIAAGIKRVIIGSLDP 104 >gi|289742059|gb|ADD19777.1| tRNA-specific adenosine-34 deaminase subunit [Glossina morsitans morsitans] Length = 344 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 15/60 (25%), Positives = 35/60 (58%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134 D+Y++ EPC MC+ A+ +R++R+++ + G ++ + + +H E+Y ++E Sbjct: 284 DVYLSQEPCLMCSMALLHSRVKRIFFLYESKINGSLKTNFKLQQVKDLNHHYEVYQFVAE 343 >gi|19114320|ref|NP_593408.1| tRNA specific adenosine deaminase subunit Tad3 (predicted) [Schizosaccharomyces pombe 972h-] gi|74638746|sp|Q9P7N4|TAD3_SCHPO RecName: Full=tRNA-specific adenosine deaminase subunit tad3; AltName: Full=tRNA-specific adenosine-34 deaminase subunit tad3 gi|7106099|emb|CAB76025.1| tRNA specific adenosine deaminase subunit Tad3 (predicted) [Schizosaccharomyces pombe] Length = 315 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 18/113 (15%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 N + A+ ++ + +SR NR KD R C+ L+ + +T E Sbjct: 210 NHCVMNAINLVAKRELSRRQNRTDGSKD----------RYLCKDLT--------VVMTHE 251 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134 PC MC+ + +RIRRL Y P GGIE+ + A +H Y G ++ Sbjct: 252 PCVMCSMGLLHSRIRRLIYCKKQPLTGGIESLYGIHWRAELNHRYLAYSGWNK 304 >gi|251795232|ref|YP_003009963.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2] gi|247542858|gb|ACS99876.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2] Length = 159 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 1/80 (1%) Query: 25 PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P GA+ V +I+ N K T HAE + L LY T EPC Sbjct: 26 PFGAILVNEQGEIVLEQENVELTEKRCTGHAETALMEKASHQFEHHDLWNYTLYTTFEPC 85 Query: 84 TMCAAAISLARIRRLYYGAS 103 MC+ AI + ++ Y A+ Sbjct: 86 AMCSGAIYWGNVGKVVYAAT 105 >gi|152993547|ref|YP_001359268.1| riboflavin biosynthesis protein RibG [Sulfurovum sp. NBC37-1] gi|151425408|dbj|BAF72911.1| riboflavin biosynthesis protein RibG [Sulfurovum sp. NBC37-1] Length = 330 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 37/138 (26%) Query: 7 FMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL++A L VGAV L+ I++ ++ K T+HAE+LA+ Sbjct: 6 YMQLALDKAWEYQLLTYPNPAVGAVVTLDGTILAVEAHK----KAGTSHAEVLALLKAYE 61 Query: 65 ILSQ----------------------EILPEVDLYVTLEPCT------MCAAAISLARIR 96 LSQ + E +YVTLEPC+ CA + ++ Sbjct: 62 TLSQSTVDFDRMDAQKAHNFLHTIPKDFFSECSIYVTLEPCSHEGRTPACATLLEALNLK 121 Query: 97 RLYYGASNP---KGGGIE 111 ++ G +P GGG++ Sbjct: 122 KVIIGTKDPIEGHGGGMD 139 >gi|254518952|ref|ZP_05131008.1| cytidine/deoxycytidylate deaminase [Clostridium sp. 7_2_43FAA] gi|226912701|gb|EEH97902.1| cytidine/deoxycytidylate deaminase [Clostridium sp. 7_2_43FAA] Length = 160 Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 1/81 (1%) Query: 24 IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 +P G + V + II N T HAE + S+ L + LY T EP Sbjct: 25 MPFGCILVDKDGNIILEQMNIEGTDYKCTGHAETQLMEKASMKYSKSFLWDCTLYSTAEP 84 Query: 83 CTMCAAAISLARIRRLYYGAS 103 C MC AI + R+ YG S Sbjct: 85 CAMCTGAIYWGNVGRIVYGLS 105 >gi|29831349|ref|NP_825983.1| cytidine/deoxycytidine deaminase [Streptomyces avermitilis MA-4680] gi|29608464|dbj|BAC72518.1| putative cytidine/deoxycytidine deaminase [Streptomyces avermitilis MA-4680] Length = 153 Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 4/104 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +++ A+EEA+ IP+GA + ++ R NR + D + HAE A R R Sbjct: 13 WLATAVEEARAGLAEGGIPIGAALYGADGALLGRGHNRRVQDDDPSMHAETAAFRSAGR- 71 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 Q + TL PC C+ + I R+ G + GG Sbjct: 72 --QRTYRGTTMVTTLSPCWYCSGLVRQFGISRVVVGEAATFHGG 113 >gi|294498727|ref|YP_003562427.1| riboflavin biosynthesis protein RibD [Bacillus megaterium QM B1551] gi|294348664|gb|ADE68993.1| riboflavin biosynthesis protein RibD [Bacillus megaterium QM B1551] Length = 363 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 23/149 (15%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M+ AL+ A+ + + P VG+V V +N+I+ LK HAEI A+RM Sbjct: 7 YMNIALQNAKATKGQTD-PNPLVGSVIVNDNRIVGIG----THLKAGEPHAEIHALRM-- 59 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + E YVTLEPC+ CA A+ A ++++ +P NG + Sbjct: 60 ---AGEQAKGATAYVTLEPCSHHGRTGPCAEALVEAGVKKVVIATLDPNPLVAGNGVKIL 116 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ G+ E+ SRQ+ + F K Sbjct: 117 ENAGI----EVITGVCEEESRQMNEVFNK 141 >gi|328883182|emb|CCA56421.1| Cytosine deaminase [Streptomyces venezuelae ATCC 10712] Length = 168 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 8/118 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +++ AL EA+ +PVGA + ++ R NR + D +AHAE A R R Sbjct: 27 WLATALAEARAGRDEGGVPVGAALYGADGALLGRGHNRRVQDGDPSAHAETAAFRAAGR- 85 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTL 119 Q + TL PC C+ + I R+ G + GG E+G + L Sbjct: 86 --QRSYRGTTMVTTLSPCWYCSGLVRQFGISRVVVGEAETFHGGHDWLAEHGVEVLVL 141 >gi|13472273|ref|NP_103840.1| hypothetical protein mll2512 [Mesorhizobium loti MAFF303099] gi|14023018|dbj|BAB49626.1| mll2512 [Mesorhizobium loti MAFF303099] Length = 156 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 44/109 (40%), Gaps = 8/109 (7%) Query: 1 MKKGNVF--MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57 M + +F + A + A+ AA P G V V ++ I+ R GN N HAE Sbjct: 1 MTRDQMFAHLRAANDVAREAAAHGHHPFGCVLVGPDDHILMRQGNIN-----TVRHAETE 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 R E L L T EPC MC + A I RL YG K Sbjct: 56 LGRRAADAYPPEFLWSCTLVSTGEPCAMCTGTLYWANIGRLVYGFEETK 104 >gi|308484008|ref|XP_003104205.1| hypothetical protein CRE_01105 [Caenorhabditis remanei] gi|308258513|gb|EFP02466.1| hypothetical protein CRE_01105 [Caenorhabditis remanei] Length = 337 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 5/108 (4%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-MGCRILSQEILPEVDLYVTLE 81 E+ G +AV +N ++S L H + +R + R S + D+++ E Sbjct: 209 EMGDGCIAVQSNSVLSSGCPSTHPL----GHPVMEMVRNLQKRTGSDYLGTGSDVFLVNE 264 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 PC MC+ A+ RI+RL+Y ++ G ++G Q + + +H E++ Sbjct: 265 PCAMCSMALVHFRIKRLFYVRNSKNGVLKDDGWQLHLEPSINHHYEVF 312 >gi|297201565|ref|ZP_06918962.1| cytidine/deoxycytidine deaminase [Streptomyces sviceus ATCC 29083] gi|197711065|gb|EDY55099.1| cytidine/deoxycytidine deaminase [Streptomyces sviceus ATCC 29083] Length = 152 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 4/104 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +++ A+EEA+ IP+GA + ++ R NR + D + HAE A R R Sbjct: 12 WLATAVEEARAGLAEGGIPIGAALYGADGTLLGRGHNRRVQDGDPSLHAETAAFRAAGR- 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 Q + TL PC C+ + I R+ G + GG Sbjct: 71 --QRSYRGTTMVTTLSPCWYCSGLVRQFGIGRVVVGEATTFHGG 112 >gi|239816932|ref|YP_002945842.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110] gi|239803509|gb|ACS20576.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110] Length = 158 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 40/94 (42%), Gaps = 7/94 (7%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 A E A+ A P GAV V + I++ GN D HAE R + Sbjct: 13 ADEVARRAMAMGRHPFGAVLVAPDGETILAEQGN-----IDTVNHAEATLARHAAQNWPA 67 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 + L + L T EPC MCA A I R+ YGA Sbjct: 68 DYLWQCTLVTTFEPCAMCAGTSYWAHIGRIVYGA 101 >gi|302871184|ref|YP_003839820.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor obsidiansis OB47] gi|302574043|gb|ADL41834.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor obsidiansis OB47] Length = 371 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 20/149 (13%) Query: 7 FMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M+ ALE A+ A+ L N VG V V N II + ++ K HAE+LAI Sbjct: 9 YMNMALELAKKASPLVLPNP-RVGCVIVKNGTIIGKGYHQKYGEK----HAEVLAIEDAI 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + L +YV+LEPC C AI + I+++ +P + NG Sbjct: 64 K--NGNSLKNATMYVSLEPCCHFGKQPPCTEAIIKSGIKKVIIATRDP--NPLVNGKGIQ 119 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 L H E+ G+ ++ + + ++FFK Sbjct: 120 ILK--QHGIEVVEGVLQKEAESVNKEFFK 146 >gi|254498334|ref|ZP_05111073.1| cytidine and deoxycytidylate deaminase family protein [Legionella drancourtii LLAP12] gi|254352442|gb|EET11238.1| cytidine and deoxycytidylate deaminase family protein [Legionella drancourtii LLAP12] Length = 175 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 7/104 (6%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAI 59 K +M A++ A++ + P A+ V N +I+S+ N ++ + T H E++AI Sbjct: 31 KSDEYYMQIAIDLAKS---NPKAPFAALIVDNKTGEILSKGINASKV--NPTFHGEMVAI 85 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + + +V LY T EPC+MC +A+ +I R+ + S Sbjct: 86 NNCVKEHPKVDWSQVTLYTTAEPCSMCQSAVVWTKISRVVFATS 129 >gi|25144639|ref|NP_499445.2| hypothetical protein Y47D3A.14 [Caenorhabditis elegans] gi|19571667|emb|CAB55073.2| C. elegans protein Y47D3A.14, confirmed by transcript evidence [Caenorhabditis elegans] Length = 287 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 16/55 (29%), Positives = 33/55 (60%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 D+++ EPC MC+ A+ R++R++Y ++ G E+G Q + + +H E++ Sbjct: 209 DVFLITEPCAMCSMALVHFRVKRVFYARNSRNGVLKEDGWQLHLEPSINHHYEVF 263 >gi|294777680|ref|ZP_06743131.1| riboflavin biosynthesis protein RibD [Bacteroides vulgatus PC510] gi|319640266|ref|ZP_07994991.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 3_1_40A] gi|294448748|gb|EFG17297.1| riboflavin biosynthesis protein RibD [Bacteroides vulgatus PC510] gi|317388041|gb|EFV68895.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 3_1_40A] Length = 350 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 29/157 (18%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M K ++S L+ A N L N P VGAV V ++ II ++ AHAE+ Sbjct: 1 MTKDEKYISRCLQLAYNG-LCNTAPNPMVGAVIVYHDTIIGEG----YHIRCGEAHAEVN 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KG 107 AIR + + +L E +YV+LEPC+ CA I RI ++ G +P G Sbjct: 56 AIR---SVKDENLLKESTIYVSLEPCSHYGKTPPCADLIIEKRIPKVVIGCIDPFSQVAG 112 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 GIE + E+ G+ E+ R +I+ F Sbjct: 113 RGIEKLRK--------AGIEVTVGVLEEECRHLIRRF 141 >gi|225851435|ref|YP_002731669.1| riboflavin biosynthesis protein RibD [Persephonella marina EX-H1] gi|225645583|gb|ACO03769.1| riboflavin biosynthesis protein RibD [Persephonella marina EX-H1] Length = 365 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 29/159 (18%) Query: 6 VFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +FM AL A+ L + P VGAV V + KII + ++ + A AI+ G Sbjct: 8 IFMKEALRLAELRKGLTHPNPTVGAVIVKDGKIIGKGFHKKAGMPHAEREAINDAIKKGF 67 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIENG 113 + +YVTLEPC C AI RI+R+ +P G G+E Sbjct: 68 NLEGST------MYVTLEPCCHYGRTPPCTEAIIDRRIKRVVIATVDPNPQVSGKGVE-- 119 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 H E G+ + +R++ +DFF KE+R Sbjct: 120 ------ILKKHGIETVVGVLQDEARKLNEDFFVYIKEKR 152 >gi|95929567|ref|ZP_01312309.1| riboflavin biosynthesis protein RibD [Desulfuromonas acetoxidans DSM 684] gi|95134264|gb|EAT15921.1| riboflavin biosynthesis protein RibD [Desulfuromonas acetoxidans DSM 684] Length = 364 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 21/148 (14%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL+ A+ A R PVGAV V + +++ R + K HAE+ A+R Sbjct: 1 MQIALDLARKALGRTTPNPPVGAVIVRDGQVVGRGFHP----KAGEPHAEVFALRD---- 52 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + + D YVTLEPC+ C A+ A + R++ G +P G + Sbjct: 53 -AADQARGADAYVTLEPCSHHGRTPPCCEALIAAGVSRVFVGLIDPNPQVSGQGVERLRA 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E + R++I F K Sbjct: 112 AGV----EVEVGVLETQCRRLIAPFIKH 135 >gi|313665291|ref|YP_004047162.1| cytidine and deoxycytidylate deaminase zinc-binding region [Mycoplasma leachii PG50] gi|312949249|gb|ADR23845.1| cytidine and deoxycytidylate deaminase zinc-binding region [Mycoplasma leachii PG50] Length = 160 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 6/55 (10%) Query: 51 TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 AHAE+ AI + S+ L DLYVTL PC CA I A I+R+YY A++P Sbjct: 77 VAHAELNAI-----VSSRSDLSNCDLYVTLFPCNECAKIIIQAGIKRIYY-ANDP 125 >gi|42561111|ref|NP_975562.1| dCMP deaminase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492608|emb|CAE77204.1| dCMP deaminase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|256384072|gb|ACU78642.1| deoxycytidylate deaminase [Mycoplasma mycoides subsp. capri str. GM12] gi|256384904|gb|ACU79473.1| deoxycytidylate deaminase [Mycoplasma mycoides subsp. capri str. GM12] gi|296455570|gb|ADH21805.1| deoxycytidylate deaminase (dCMP deaminase) [synthetic Mycoplasma mycoides JCVI-syn1.0] gi|301320471|gb|ADK69114.1| cytidine and deoxycytidylate deaminase zinc-binding region [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 160 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 6/55 (10%) Query: 51 TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 AHAE+ AI + S+ L DLYVTL PC CA I A I+R+YY A++P Sbjct: 77 VAHAELNAI-----VSSRSDLSNCDLYVTLFPCNECAKIIIQAGIKRIYY-ANDP 125 >gi|331703568|ref|YP_004400255.1| deoxycytidylate deaminase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802123|emb|CBW54277.1| Deoxycytidylate deaminase (dCMP deaminase) [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 146 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 6/55 (10%) Query: 51 TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 AHAE+ AI + S+ L DLYVTL PC CA I A I+R+YY A++P Sbjct: 63 VAHAELNAI-----VSSRSDLSNCDLYVTLFPCNECAKIIIQAGIKRIYY-ANDP 111 >gi|256392530|ref|YP_003114094.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM 44928] gi|256358756|gb|ACU72253.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM 44928] Length = 143 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 32/138 (23%), Positives = 63/138 (45%), Gaps = 8/138 (5%) Query: 11 ALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A++ A +A + P G++ A + I+ N R D+ AH E+ R R LS E Sbjct: 13 AIDIAAHAVTLGDAPYGSLLADADGTILIEEHNTVRRDGDIAAHPELKLARWAARELSPE 72 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 +Y + +PC MC I + + R+ Y + + + G+++ + P+ Sbjct: 73 AAATTTMYTSCQPCGMCTGGIVRSGLGRVVYALATDQLVELNPGSEWPVV------PQDG 126 Query: 130 PGISEQRSRQIIQDFFKE 147 P + + +R I+ ++K+ Sbjct: 127 PALFDA-ARVPIEAYYKK 143 >gi|189195612|ref|XP_001934144.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187980023|gb|EDU46649.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 501 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 17/38 (44%), Positives = 25/38 (65%) Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 ++D+Y+T EPC MC+ AI +R RR +G P GG+ Sbjct: 410 DLDIYLTNEPCVMCSMAILHSRFRRCIFGKRMPHTGGM 447 >gi|83319549|ref|YP_424377.1| deoxycytidylate deaminase [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283435|gb|ABC01367.1| probable deoxycytidylate deaminase [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 153 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 6/55 (10%) Query: 51 TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 AHAE+ AI + S+ L DLYVTL PC CA I A I+R+YY A++P Sbjct: 70 VAHAELNAI-----VSSRSDLSNCDLYVTLFPCNECAKIIIQAGIKRIYY-ANDP 118 >gi|237725969|ref|ZP_04556450.1| riboflavin biosynthesis protein ribD [Bacteroides sp. D4] gi|229435777|gb|EEO45854.1| riboflavin biosynthesis protein ribD [Bacteroides dorei 5_1_36/D4] Length = 355 Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 29/157 (18%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M K ++S L+ A N L N P VGAV V ++ II ++ AHAE+ Sbjct: 1 MTKDEKYISRCLQLAHNG-LCNTAPNPMVGAVIVYHDTIIGEG----YHIRCGEAHAEVN 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KG 107 AIR + + +L E +YV+LEPC+ CA I +I ++ G +P G Sbjct: 56 AIR---SVKDENLLKESTIYVSLEPCSHYGKTPPCADLIIEKKIPKVVIGCMDPFSLVAG 112 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 GIE + E+ G+ E+ R +I+ F Sbjct: 113 RGIEKLRK--------AGIEVTVGVLEEECRHLIRRF 141 >gi|54296165|ref|YP_122534.1| hypothetical protein lpp0188 [Legionella pneumophila str. Paris] gi|53749950|emb|CAH11335.1| hypothetical protein lpp0188 [Legionella pneumophila str. Paris] Length = 153 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 10/100 (10%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ +E A + P GA+ V ++K I N + H E+ I R+ Sbjct: 8 FMAATIEVAATNPMA---PYGAIIVYDDKEILLKSVNNAH-NNPLMHGELSVIH---RLF 60 Query: 67 SQEILPEVD---LYVTLEPCTMCAAAISLARIRRLYYGAS 103 +V LY T EPC MCAAAI A I ++ YG+S Sbjct: 61 ENGFDGDVSRLSLYTTAEPCPMCAAAIYWAMIPKVVYGSS 100 >gi|307608893|emb|CBW98292.1| hypothetical protein LPW_01491 [Legionella pneumophila 130b] Length = 153 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 10/100 (10%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ +E A + P GA+ V ++K I + N + H E+ I R+ Sbjct: 8 FMAATIEVAVTNPMA---PYGAIIVYDDKEI-LLKSVNSAHNNPLMHGELSVIH---RLF 60 Query: 67 SQEI---LPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + ++ LY T EPC MCAAAI A I ++ YG+S Sbjct: 61 ENGFDGDVSKLSLYTTAEPCPMCAAAIYWAMIPKVVYGSS 100 >gi|114330216|ref|YP_746438.1| CMP/dCMP deaminase, zinc-binding [Nitrosomonas eutropha C91] gi|114307230|gb|ABI58473.1| CMP/dCMP deaminase, zinc-binding protein [Nitrosomonas eutropha C91] Length = 195 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%) Query: 36 IISRAGNRNRELKDVTAHAEILAI-----RMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90 +I+ NR TAHAEILA+ ++G LS + LP +L + EPC MC A+ Sbjct: 62 LIAAGTNRVVSSHCSTAHAEILALSLAQAKLGSHDLSADGLPACELVTSAEPCVMCFGAV 121 Query: 91 SLARIRRLYYGA 102 + +R L A Sbjct: 122 IWSGVRSLVCAA 133 >gi|212695385|ref|ZP_03303513.1| hypothetical protein BACDOR_04934 [Bacteroides dorei DSM 17855] gi|237711578|ref|ZP_04542059.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 9_1_42FAA] gi|265753006|ref|ZP_06088575.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_33FAA] gi|212662020|gb|EEB22594.1| hypothetical protein BACDOR_04934 [Bacteroides dorei DSM 17855] gi|229454273|gb|EEO59994.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 9_1_42FAA] gi|263236192|gb|EEZ21687.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_33FAA] Length = 355 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 29/157 (18%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M K ++S L+ A N L N P VGAV V ++ II + ++ AHAE+ Sbjct: 1 MTKDEKYISRCLQLAHNG-LCNTAPNPMVGAVIVYHDTIIGEGYH----IRCGEAHAEVN 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KG 107 AIR + + +L E +YV+LEPC+ CA I +I ++ G +P G Sbjct: 56 AIR---SVKDENLLKESTIYVSLEPCSHYGKTPPCADLIIEKKIPKVVIGCMDPFSLVAG 112 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 GIE + E+ G+ E+ R +I+ F Sbjct: 113 RGIEKLRK--------AGIEVTVGVLEEECRHLIRRF 141 >gi|296503905|ref|YP_003665605.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus thuringiensis BMB171] gi|296324957|gb|ADH07885.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus thuringiensis BMB171] Length = 365 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 25/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M + ++M ALE A+ A++ + VG+V V +N+I+ + +K HAEI Sbjct: 1 MLEHELYMKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGVGAH----MKAGEPHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 AIRM + E +YVTLEPC+ CA AI A I+++ +P Sbjct: 55 HAIRM-----AGEQARGATIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVS 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A E+ G+ E+ S+++ + F K Sbjct: 110 GRGIKILQDAGI----EVLVGVCEEESKKMNEVFNK 141 >gi|288941195|ref|YP_003443435.1| CMP/dCMP deaminase protein [Allochromatium vinosum DSM 180] gi|288896567|gb|ADC62403.1| CMP/dCMP deaminase zinc-binding protein [Allochromatium vinosum DSM 180] Length = 189 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 17/121 (14%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAI-----RMGCRILSQEILPEVDLYVTLEPCTMCA 87 + ++I+ NR AHAE++AI R+G L Q + L+ + EPC MC Sbjct: 61 SGRLIAAGVNRVVSSGCSIAHAEMVAIGIAQQRLGSFDLRQAVPGGCVLFTSAEPCAMCM 120 Query: 88 AAISLARIRRLYYGA--SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 AI + I R+ GA S+ + G + G H P + QR ++ +D Sbjct: 121 GAIPWSGIERVVIGARDSDVRAIGFDEG----------HKPADWIAGYAQRGIEVTRDLL 170 Query: 146 K 146 + Sbjct: 171 R 171 >gi|295692792|ref|YP_003601402.1| riboflavin biosynthesis protein ribd [Lactobacillus crispatus ST1] gi|295030898|emb|CBL50377.1| Riboflavin biosynthesis protein ribD [Lactobacillus crispatus ST1] Length = 352 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 26/135 (19%) Query: 1 MKKGNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M+K +M+ ALEEA+ +N + VGAV V N ++++ + + HAE Sbjct: 1 MEKDTFYMNLALEEAKKGRYQTWKNPM-VGAVIVKNGQVLATGYHHHYGQN----HAE-- 53 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----G 107 R L+ E L LYVTLEPC C+ I + I+R+ G +P G Sbjct: 54 --RDAISKLTPEQLFNSTLYVTLEPCNHYGKQPPCSDLIIKSGIKRVVVGQIDPHKLVTG 111 Query: 108 GGI----ENGTQFYT 118 GI +NG Q T Sbjct: 112 KGIAQLQKNGIQVTT 126 >gi|326941086|gb|AEA16982.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus thuringiensis serovar chinensis CT-43] Length = 365 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 25/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M + ++M ALE A+ A++ + VG+V V +N+I+ + +K HAEI Sbjct: 1 MLEHELYMKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGVGAH----MKAGEPHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 AIRM + E +YVTLEPC+ CA AI A I+++ +P Sbjct: 55 HAIRM-----AGEQARGATIYVTLEPCSHYGRTGPCAEAIVQAGIKKVVVATLDPNPLVS 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A E+ G+ E+ S+++ + F K Sbjct: 110 GRGIKILQDAGI----EVLVGVCEEESKKMNEVFNK 141 >gi|218201691|gb|EEC84118.1| hypothetical protein OsI_30450 [Oryza sativa Indica Group] Length = 411 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 23/36 (63%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 D+Y+ EPC+MCA A+ R +R++Y NP G + Sbjct: 338 DIYLVWEPCSMCAMALVHQRFKRIFYAFPNPITGAL 373 >gi|297192826|ref|ZP_06910224.1| cytidine/deoxycytidine deaminase [Streptomyces pristinaespiralis ATCC 25486] gi|197722375|gb|EDY66283.1| cytidine/deoxycytidine deaminase [Streptomyces pristinaespiralis ATCC 25486] Length = 149 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 4/106 (3%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +++ A+ EA+ IP+GA + ++ R NR + D +AHAE A R Sbjct: 7 GTWLATAVAEARAGLAEGGIPIGAALYGADGTLLGRGHNRRVQDGDPSAHAETEAFRAAG 66 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 R Q + TL PC C+ + I R+ G + GG Sbjct: 67 R---QRSYRGTTMVTTLSPCWYCSGLVRQFGISRVVIGETETFHGG 109 >gi|152990173|ref|YP_001355895.1| riboflavin biosynthesis protein RibG [Nitratiruptor sp. SB155-2] gi|151422034|dbj|BAF69538.1| riboflavin biosynthesis protein RibG [Nitratiruptor sp. SB155-2] Length = 333 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 70/174 (40%), Gaps = 39/174 (22%) Query: 5 NVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 N FM AL+EA L P VGAV +NN IIS+ + K HAE+ AI+ Sbjct: 6 NFFMDIALQEAWRYQGLTYPNPAVGAVVAINNCIISKGAHT----KAGAPHAEVEAIKNA 61 Query: 63 CRILS----------------------QEILPEVDLYVTLEPCTM------CAAAISLAR 94 L+ +++ +YVTLEPC C+ I Sbjct: 62 YYTLTGDEHVLHLQDALELHEYLVANAKDLFHNATIYVTLEPCNHFGKTPPCSLLIKKLG 121 Query: 95 IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 +R+ +P G F L C E+ GI E+R++ +I+ F + R Sbjct: 122 FQRVVIALKDPNEEA-AGGASF--LRNC--GIEVDIGIQEERAKVLIEPFLQWR 170 >gi|115478038|ref|NP_001062614.1| Os09g0128600 [Oryza sativa Japonica Group] gi|50252596|dbj|BAD28768.1| cytidine/deoxycytidylate deaminase-like protein [Oryza sativa Japonica Group] gi|50252628|dbj|BAD28798.1| cytidine/deoxycytidylate deaminase-like protein [Oryza sativa Japonica Group] gi|113630847|dbj|BAF24528.1| Os09g0128600 [Oryza sativa Japonica Group] gi|215694768|dbj|BAG89959.1| unnamed protein product [Oryza sativa Japonica Group] gi|222641086|gb|EEE69218.1| hypothetical protein OsJ_28439 [Oryza sativa Japonica Group] Length = 411 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 23/36 (63%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 D+Y+ EPC+MCA A+ R +R++Y NP G + Sbjct: 338 DIYLVWEPCSMCAMALVHQRFKRIFYAFPNPITGAL 373 >gi|218232159|ref|YP_002368101.1| riboflavin biosynthesis protein RibD [Bacillus cereus B4264] gi|218160116|gb|ACK60108.1| riboflavin biosynthesis protein RibD [Bacillus cereus B4264] Length = 367 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 25/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M + ++M ALE A+ A++ + VG+V V +N+I+ + +K +HAEI Sbjct: 1 MLEHELYMKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGVGAH----MKAGESHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 AIRM + E +YVTLEPC+ CA AI A I+++ +P Sbjct: 55 HAIRM-----AGEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVS 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A E+ G+ E+ S+++ + F K Sbjct: 110 GRGIKILQDAGI----EVLVGVCEEESKKMNEVFNK 141 >gi|311899518|dbj|BAJ31926.1| putative cytosine deaminase [Kitasatospora setae KM-6054] Length = 153 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 4/109 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ ++ AL EA+ IP+GA + +++ R NR + D + HAE A R Sbjct: 8 EQARAWLDVALAEAETGLAEGGIPIGAALFRRDGELLGRGHNRRVQDGDPSMHAETSAFR 67 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 R+ + + TL PC C+ + I + G S GG Sbjct: 68 AAGRLRGYR---DTVMVTTLSPCWYCSGLVRQFGIGHVVIGESTTFTGG 113 >gi|239617610|ref|YP_002940932.1| riboflavin biosynthesis protein RibD [Kosmotoga olearia TBF 19.5.1] gi|239506441|gb|ACR79928.1| riboflavin biosynthesis protein RibD [Kosmotoga olearia TBF 19.5.1] Length = 345 Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 68/161 (42%), Gaps = 44/161 (27%) Query: 7 FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRA-----GNRNRELKDVTAHAEILAI 59 FM A+EEA+ L N P VGAV V N KI+S G R HAEI+AI Sbjct: 5 FMELAIEEARKGEGLVNPNPLVGAVIVKNGKILSTGYHEYFGGR---------HAEIVAI 55 Query: 60 ----RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK--- 106 +MG I EI YVTLEPC C I +Y G +P Sbjct: 56 ENAKKMGYDIKGAEI------YVTLEPCVHYGKTPPCTDRIIREGFSAVYIGTLDPNPMV 109 Query: 107 -GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G G E + C + GI E +++++I+ F K Sbjct: 110 HGKGEE---KLKNAGIC-----VKHGILEVKAKELIEVFAK 142 >gi|20091176|ref|NP_617251.1| cytosine deaminase [Methanosarcina acetivorans C2A] gi|19916284|gb|AAM05731.1| cytosine deaminase [Methanosarcina acetivorans C2A] Length = 189 Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 6/97 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+ AQ + P+G V + NN +I+ + N + D H E AIR R Sbjct: 44 FMRIAVLLAQKSYDEGGCPIGGVIIDNNTRRIVGKGHNTLVQDNDPYNHGETSAIRDAGR 103 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + ++ TL PC +CA I + + R+ G Sbjct: 104 ----QDFSNTTIFTTLSPCDVCATLIYMRQFDRVVVG 136 >gi|67078030|ref|YP_245650.1| riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific deaminase) and 5-amino-6-(5-phosphoribosylamino)uracil reductase) [Bacillus cereus E33L] gi|66970336|gb|AAY60312.1| riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific deaminase) and 5-amino-6-(5-phosphoribosylamino)uracil reductase) [Bacillus cereus E33L] Length = 367 Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 25/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M + ++M ALE A+ A++ + VG+V V +N+I+ + +K HAEI Sbjct: 1 MLEHELYMKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGIGAH----MKAGEPHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 AIRM + E +YVTLEPC+ CA AI A I+++ +P Sbjct: 55 HAIRM-----AGEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVS 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A E+ G+ E++S+++ + F K Sbjct: 110 GRGIKILQDAGI----EVLVGVCEEKSKKMNEVFNK 141 >gi|118580019|ref|YP_901269.1| riboflavin biosynthesis protein RibD [Pelobacter propionicus DSM 2379] gi|118502729|gb|ABK99211.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pelobacter propionicus DSM 2379] Length = 367 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 27/132 (20%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V + I+ +R K T+HAEI A+ M + E D++VTLEPC Sbjct: 28 VGCVIVKDGVIVGTGWHR----KAGTSHAEIHALEM-----AGESARGADVFVTLEPCCH 78 Query: 86 ------CAAAISLARIRRLYYGASNP----KGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 C+ A+ A +RR+ G S+P GGG+ + T ++ G+ E+ Sbjct: 79 TGKTPPCSQALIRAGVRRVVAGMSDPNPRVSGGGL---AELETAGI-----QVVCGVLEK 130 Query: 136 RSRQIIQDFFKE 147 R + + F K+ Sbjct: 131 ECRDLNRPFIKQ 142 >gi|262038723|ref|ZP_06012083.1| riboflavin biosynthesis protein RibD [Leptotrichia goodfellowii F0264] gi|261747275|gb|EEY34754.1| riboflavin biosynthesis protein RibD [Leptotrichia goodfellowii F0264] Length = 382 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 43/117 (36%), Positives = 54/117 (46%), Gaps = 21/117 (17%) Query: 7 FMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M ALE A+ R N P VGAV V N KII ++ AHAE+ AI Sbjct: 21 YMKMALELAKKGIGRVNPNPLVGAVIVKNGKIIGEGYHKMFG----EAHAEVHAIEN--- 73 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111 + E +YVTLEPC+ CA I A I+R G+ +P G GIE Sbjct: 74 --AGEETKNATIYVTLEPCSHYGKTPPCAEKIIKAGIKRCVIGSGDPNPEVAGKGIE 128 >gi|215405109|ref|ZP_03417290.1| hypothetical protein Mtub0_15737 [Mycobacterium tuberculosis 02_1987] gi|215412978|ref|ZP_03421679.1| hypothetical protein Mtub9_16461 [Mycobacterium tuberculosis 94_M4241A] gi|215428566|ref|ZP_03426485.1| hypothetical protein MtubT9_20149 [Mycobacterium tuberculosis T92] gi|215432070|ref|ZP_03429989.1| hypothetical protein MtubE_15680 [Mycobacterium tuberculosis EAS054] gi|215447396|ref|ZP_03434148.1| hypothetical protein MtubT_16158 [Mycobacterium tuberculosis T85] gi|219559156|ref|ZP_03538232.1| hypothetical protein MtubT1_18372 [Mycobacterium tuberculosis T17] Length = 187 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 11/101 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIIS--RAGNRNRELKDVTAHAEILAIRMGCRI 65 + A+E A + A P GA A+L+ + GN E D AHAE +R Sbjct: 32 IEAAMELAIDTARHATAPFGA-ALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRA---- 86 Query: 66 LSQEILPEVDLYV---TLEPCTMCAAAISLARIRRLYYGAS 103 + LPE+ +V T EPC MCAAA L+ +R + +G S Sbjct: 87 -AMSTLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTS 126 >gi|15610251|ref|NP_217630.1| hypothetical protein Rv3114 [Mycobacterium tuberculosis H37Rv] gi|148662968|ref|YP_001284491.1| hypothetical protein MRA_3146 [Mycobacterium tuberculosis H37Ra] gi|148824307|ref|YP_001289061.1| hypothetical protein TBFG_13134 [Mycobacterium tuberculosis F11] gi|253800146|ref|YP_003033147.1| hypothetical protein TBMG_03158 [Mycobacterium tuberculosis KZN 1435] gi|289555386|ref|ZP_06444596.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289763297|ref|ZP_06522675.1| cytosine/adenosine deaminase [Mycobacterium tuberculosis GM 1503] gi|297635752|ref|ZP_06953532.1| hypothetical protein MtubK4_16592 [Mycobacterium tuberculosis KZN 4207] gi|297732750|ref|ZP_06961868.1| hypothetical protein MtubKR_16752 [Mycobacterium tuberculosis KZN R506] gi|313660083|ref|ZP_07816963.1| hypothetical protein MtubKV_16757 [Mycobacterium tuberculosis KZN V2475] gi|2076689|emb|CAB08371.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148507120|gb|ABQ74929.1| conserved hypothetical protein [Mycobacterium tuberculosis H37Ra] gi|148722834|gb|ABR07459.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] gi|253321649|gb|ACT26252.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|289440018|gb|EFD22511.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289710803|gb|EFD74819.1| cytosine/adenosine deaminase [Mycobacterium tuberculosis GM 1503] gi|328459884|gb|AEB05307.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length = 176 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 11/98 (11%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIIS--RAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 A+E A + A P GA A+L+ + GN E D AHAE +R + Sbjct: 24 AMELAIDTARHATAPFGA-ALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRA-----AM 77 Query: 69 EILPEVDLYV---TLEPCTMCAAAISLARIRRLYYGAS 103 LPE+ +V T EPC MCAAA L+ +R + +G S Sbjct: 78 STLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTS 115 >gi|31794293|ref|NP_856786.1| hypothetical protein Mb3141 [Mycobacterium bovis AF2122/97] gi|121638999|ref|YP_979223.1| hypothetical protein BCG_3139 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991491|ref|YP_002646180.1| hypothetical protein JTY_3134 [Mycobacterium bovis BCG str. Tokyo 172] gi|260188150|ref|ZP_05765624.1| hypothetical protein MtubCP_19308 [Mycobacterium tuberculosis CPHL_A] gi|260202256|ref|ZP_05769747.1| hypothetical protein MtubT4_19746 [Mycobacterium tuberculosis T46] gi|260206449|ref|ZP_05773940.1| hypothetical protein MtubK8_19337 [Mycobacterium tuberculosis K85] gi|289444678|ref|ZP_06434422.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289448793|ref|ZP_06438537.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289571322|ref|ZP_06451549.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289575826|ref|ZP_06456053.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289746924|ref|ZP_06506302.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis 02_1987] gi|289751790|ref|ZP_06511168.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289755233|ref|ZP_06514611.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis EAS054] gi|289759241|ref|ZP_06518619.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis T85] gi|294993219|ref|ZP_06798910.1| hypothetical protein Mtub2_01607 [Mycobacterium tuberculosis 210] gi|298526587|ref|ZP_07013996.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|31619888|emb|CAD96828.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] gi|121494647|emb|CAL73128.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774606|dbj|BAH27412.1| hypothetical protein JTY_3134 [Mycobacterium bovis BCG str. Tokyo 172] gi|289417597|gb|EFD14837.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289421751|gb|EFD18952.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289540257|gb|EFD44835.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289545076|gb|EFD48724.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289687452|gb|EFD54940.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis 02_1987] gi|289692377|gb|EFD59806.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289695820|gb|EFD63249.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis EAS054] gi|289714805|gb|EFD78817.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis T85] gi|298496381|gb|EFI31675.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|326902663|gb|EGE49596.1| hypothetical protein TBPG_00512 [Mycobacterium tuberculosis W-148] Length = 176 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 11/98 (11%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIIS--RAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 A+E A + A P GA A+L+ + GN E D AHAE +R + Sbjct: 24 AMELAIDTARHATAPFGA-ALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRA-----AM 77 Query: 69 EILPEVDLYV---TLEPCTMCAAAISLARIRRLYYGAS 103 LPE+ +V T EPC MCAAA L+ +R + +G S Sbjct: 78 STLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTS 115 >gi|196037929|ref|ZP_03105239.1| riboflavin biosynthesis protein RibD [Bacillus cereus NVH0597-99] gi|196031199|gb|EDX69796.1| riboflavin biosynthesis protein RibD [Bacillus cereus NVH0597-99] Length = 367 Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 25/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M + ++M ALE A+ A++ + VG+V V +N+I+ + +K HAEI Sbjct: 1 MLEHELYMKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGIGAH----MKAGEPHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 AIRM + E +YVTLEPC+ CA AI A I+++ +P Sbjct: 55 HAIRM-----AGEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVS 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A E+ G+ E++S+++ + F K Sbjct: 110 GRGIKILQDAGI----EVLVGVCEEKSKKMNEVFNK 141 >gi|206969393|ref|ZP_03230348.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH1134] gi|206736434|gb|EDZ53592.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH1134] Length = 367 Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 25/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M + ++M ALE A+ A++ + VG+V V +N+I+ + +K HAEI Sbjct: 1 MLEHELYMKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGVGAH----MKAGEPHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 AIRM + E +YVTLEPC+ CA AI A I+++ +P Sbjct: 55 HAIRM-----AGEQARGGTIYVTLEPCSHHGRTGPCAGAIVQAGIKKVVVATLDPNPLVS 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A E+ G+ E+ S+++ + F K Sbjct: 110 GRGIKILQDAGI----EVLVGVCEEESKKMNEVFNK 141 >gi|53711798|ref|YP_097790.1| riboflavin biosynthesis protein RibD [Bacteroides fragilis YCH46] gi|52214663|dbj|BAD47256.1| riboflavin biosynthesis protein RibD [Bacteroides fragilis YCH46] Length = 340 Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 17/126 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V +II ++ AHAE+ AIR + +L +YV+LEPC+ Sbjct: 21 VGAVIVCEGQIIGEG----YHIRCGEAHAEVNAIR---SVKDPSLLKHSTIYVSLEPCSH 73 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I +I R+ G +P G Q A C E+ G+ E R+ Sbjct: 74 HGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGKGIQKLRDAGC----EVIVGVLETECRE 129 Query: 140 IIQDFF 145 +I+ F Sbjct: 130 LIRKFI 135 >gi|15842685|ref|NP_337722.1| hypothetical protein MT3196 [Mycobacterium tuberculosis CDC1551] gi|167969723|ref|ZP_02552000.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium tuberculosis H37Ra] gi|218754887|ref|ZP_03533683.1| hypothetical protein MtubG1_16264 [Mycobacterium tuberculosis GM 1503] gi|254233738|ref|ZP_04927063.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|254365742|ref|ZP_04981787.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|254552197|ref|ZP_05142644.1| hypothetical protein Mtube_17378 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|308406055|ref|ZP_07494962.2| putative cytidine and deoxycytidylate deaminase zinc-binding region [Mycobacterium tuberculosis SUMu012] gi|13883005|gb|AAK47536.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium tuberculosis CDC1551] gi|124599267|gb|EAY58371.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|134151255|gb|EBA43300.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|308364666|gb|EFP53517.1| putative cytidine and deoxycytidylate deaminase zinc-binding region [Mycobacterium tuberculosis SUMu012] gi|323718345|gb|EGB27523.1| hypothetical protein TMMG_02246 [Mycobacterium tuberculosis CDC1551A] Length = 187 Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 11/101 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIIS--RAGNRNRELKDVTAHAEILAIRMGCRI 65 + A+E A + A P GA A+L+ + GN E D AHAE +R Sbjct: 32 IEAAMELAIDTARHATAPFGA-ALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRA---- 86 Query: 66 LSQEILPEVDLYV---TLEPCTMCAAAISLARIRRLYYGAS 103 + LPE+ +V T EPC MCAAA L+ +R + +G S Sbjct: 87 -AMSTLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTS 126 >gi|296166141|ref|ZP_06848586.1| cytosine deaminase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898550|gb|EFG78111.1| cytosine deaminase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 150 Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 4/104 (3%) Query: 7 FMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL+EA+ IP+G A+ + ++ R NR + D + HAE+ A R R Sbjct: 8 MMDVALDEARAGLAEGGIPIGAALFTADGVLLGRGRNRRVQRGDPSLHAEVDAFRAAGR- 66 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 Q + TL PC C+ + I L G S GG Sbjct: 67 --QRDYRSTVMVTTLAPCWYCSGLVRQFNIGSLLVGESRTFTGG 108 >gi|265765179|ref|ZP_06093454.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_16] gi|263254563|gb|EEZ25997.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_16] Length = 340 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 17/126 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V +II ++ AHAE+ AIR + +L +YV+LEPC+ Sbjct: 21 VGAVIVCEGQIIGEG----YHIRCGEAHAEVNAIR---SVKDPSLLKHSTIYVSLEPCSH 73 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I +I R+ G +P G Q A C E+ G+ E R+ Sbjct: 74 HGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGKGIQKLRDAGC----EVIVGVLETECRE 129 Query: 140 IIQDFF 145 +I+ F Sbjct: 130 LIRKFI 135 >gi|60680029|ref|YP_210173.1| putative riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacteroides fragilis NCTC 9343] gi|60491463|emb|CAH06213.1| putative riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacteroides fragilis NCTC 9343] Length = 340 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 17/126 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V +II ++ AHAE+ AIR + +L +YV+LEPC+ Sbjct: 21 VGAVIVCEGQIIGEG----YHIRCGEAHAEVNAIR---SVKDPSLLKHSTIYVSLEPCSH 73 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I +I R+ G +P G Q A C E+ G+ E R+ Sbjct: 74 HGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGKGIQKLRDAGC----EVIVGVLETECRE 129 Query: 140 IIQDFF 145 +I+ F Sbjct: 130 LIRKFI 135 >gi|330940147|ref|XP_003305924.1| hypothetical protein PTT_18900 [Pyrenophora teres f. teres 0-1] gi|311316849|gb|EFQ85984.1| hypothetical protein PTT_18900 [Pyrenophora teres f. teres 0-1] Length = 436 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 25/38 (65%) Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 ++D+Y+T EPC MC+ AI +R RR +G P GG+ Sbjct: 345 DLDIYLTNEPCVMCSMAILHSRFRRCIFGKRMPHTGGM 382 >gi|325680426|ref|ZP_08159976.1| riboflavin biosynthesis protein RibD [Ruminococcus albus 8] gi|324107864|gb|EGC02130.1| riboflavin biosynthesis protein RibD [Ruminococcus albus 8] Length = 369 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 24/112 (21%) Query: 7 FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIIS-----RAGNRNRELKDVTAHAEILAI 59 FM AL+ A+N N P VGAV V + KII+ R G+ + E +A A+ Sbjct: 6 FMQAALDSAENGMGFVNPNPMVGAVIVRDGKIIASGFHERYGSLHAER---SAFAQCNKK 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + C D+YVTLEPC C AI+ IR +Y G+S+P Sbjct: 63 GINC--------AGADMYVTLEPCCHHGKQPPCTEAIAAHGIRHVYIGSSDP 106 >gi|222055764|ref|YP_002538126.1| riboflavin biosynthesis protein RibD [Geobacter sp. FRC-32] gi|221565053|gb|ACM21025.1| riboflavin biosynthesis protein RibD [Geobacter sp. FRC-32] Length = 368 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 15/86 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V + I+ +R K T HAEI A+R + + D++VTLEPC+ Sbjct: 29 VGCVIVKDGAIVGEGWHR----KAGTPHAEIHALRQ-----AGALAEGADVFVTLEPCSH 79 Query: 86 ------CAAAISLARIRRLYYGASNP 105 CA A+ A++ R+Y G +P Sbjct: 80 FGKTPPCADALIAAKVARVYVGMVDP 105 >gi|86142849|ref|ZP_01061288.1| riboflavin biosynthesis protein RibD [Leeuwenhoekiella blandensis MED217] gi|85830881|gb|EAQ49339.1| riboflavin biosynthesis protein RibD [Leeuwenhoekiella blandensis MED217] Length = 343 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 21/147 (14%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 MS L+ A+N L N P VG+V V ++II ++ HAE+ A+ Sbjct: 1 MSRCLQLAKNG-LGNTYPNPMVGSVIVYEDRIIGEGWHQQAG----QPHAEVNAVN---S 52 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + Q +L + +YV+LEPC+ C+ I I+++ G +P G + Sbjct: 53 VNDQSLLDKATIYVSLEPCSHFGKTPPCSDLIIAKGIKKVVIGTVDPFAEVAGRGIKKLI 112 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145 A C E+ G+ EQ +Q+ + FF Sbjct: 113 DAGC----EVLVGVLEQECQQLNKRFF 135 >gi|308232338|ref|ZP_07415761.2| hypothetical protein TMAG_03287 [Mycobacterium tuberculosis SUMu001] gi|308369958|ref|ZP_07419664.2| hypothetical protein TMBG_03264 [Mycobacterium tuberculosis SUMu002] gi|308371237|ref|ZP_07424291.2| hypothetical protein TMCG_01530 [Mycobacterium tuberculosis SUMu003] gi|308372428|ref|ZP_07428645.2| hypothetical protein TMDG_03356 [Mycobacterium tuberculosis SUMu004] gi|308373631|ref|ZP_07433119.2| hypothetical protein TMEG_02388 [Mycobacterium tuberculosis SUMu005] gi|308374775|ref|ZP_07437361.2| hypothetical protein TMFG_00317 [Mycobacterium tuberculosis SUMu006] gi|308375992|ref|ZP_07445762.2| hypothetical protein TMGG_02655 [Mycobacterium tuberculosis SUMu007] gi|308377225|ref|ZP_07441571.2| hypothetical protein TMHG_02325 [Mycobacterium tuberculosis SUMu008] gi|308378194|ref|ZP_07481857.2| hypothetical protein TMIG_02622 [Mycobacterium tuberculosis SUMu009] gi|308379415|ref|ZP_07486201.2| hypothetical protein TMJG_03286 [Mycobacterium tuberculosis SUMu010] gi|308380574|ref|ZP_07490420.2| hypothetical protein TMKG_02361 [Mycobacterium tuberculosis SUMu011] gi|308214311|gb|EFO73710.1| hypothetical protein TMAG_03287 [Mycobacterium tuberculosis SUMu001] gi|308325963|gb|EFP14814.1| hypothetical protein TMBG_03264 [Mycobacterium tuberculosis SUMu002] gi|308329489|gb|EFP18340.1| hypothetical protein TMCG_01530 [Mycobacterium tuberculosis SUMu003] gi|308333335|gb|EFP22186.1| hypothetical protein TMDG_03356 [Mycobacterium tuberculosis SUMu004] gi|308336989|gb|EFP25840.1| hypothetical protein TMEG_02388 [Mycobacterium tuberculosis SUMu005] gi|308340803|gb|EFP29654.1| hypothetical protein TMFG_00317 [Mycobacterium tuberculosis SUMu006] gi|308344671|gb|EFP33522.1| hypothetical protein TMGG_02655 [Mycobacterium tuberculosis SUMu007] gi|308348621|gb|EFP37472.1| hypothetical protein TMHG_02325 [Mycobacterium tuberculosis SUMu008] gi|308353346|gb|EFP42197.1| hypothetical protein TMIG_02622 [Mycobacterium tuberculosis SUMu009] gi|308357180|gb|EFP46031.1| hypothetical protein TMJG_03286 [Mycobacterium tuberculosis SUMu010] gi|308361131|gb|EFP49982.1| hypothetical protein TMKG_02361 [Mycobacterium tuberculosis SUMu011] Length = 161 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 11/98 (11%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIIS--RAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 A+E A + A P GA A+L+ + GN E D AHAE +R + Sbjct: 9 AMELAIDTARHATAPFGA-ALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRA-----AM 62 Query: 69 EILPEVDLYV---TLEPCTMCAAAISLARIRRLYYGAS 103 LPE+ +V T EPC MCAAA L+ +R + +G S Sbjct: 63 STLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTS 100 >gi|145499399|ref|XP_001435685.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124402819|emb|CAK68288.1| unnamed protein product [Paramecium tetraurelia] Length = 256 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 27/53 (50%) Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 E+ L + EPC MCA A+ +RI+ +YY GG+ + Q L +H Sbjct: 197 EMTLVIYFEPCIMCAMALVHSRIKEVYYYQKRVVDGGLNDQLQLNNLKQLNHK 249 >gi|152996717|ref|YP_001341552.1| zinc-binding CMP/dCMP deaminase [Marinomonas sp. MWYL1] gi|150837641|gb|ABR71617.1| CMP/dCMP deaminase zinc-binding [Marinomonas sp. MWYL1] Length = 158 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 29/55 (52%) Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 D+T HAE + + + L + +YV+ EPC MCA + A + RL YG S Sbjct: 53 DMTGHAERKLMTRASKAYRPDFLAKCTMYVSAEPCAMCAGSAYWAGLGRLVYGLS 107 >gi|311694330|gb|ADP97203.1| CMP/dCMP deaminase, zinc-binding protein [marine bacterium HP15] Length = 159 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Query: 24 IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 +P AV V N ++ + N+ E D TAHAEI AIR R + L L + EP Sbjct: 30 LPFSAVIVNQNGDVVGKGVNQVAEHLDCTAHAEIQAIRDASRNENSVSLKGTTLIASGEP 89 Query: 83 CTMCAAAISLARI 95 C +C AI +A I Sbjct: 90 CALCYMAIRMAGI 102 >gi|291533443|emb|CBL06556.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Megamonas hypermegale ART12/1] Length = 360 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 27/150 (18%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A++ A NA R P VGAV V +N+++ +R T HAE+ A+ Sbjct: 1 MRLAMQLAGNAIGRTS-PNPLVGAVIVKDNRVVGCGWHREAG----TPHAEVHALNQ--- 52 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYG--ASNPKGGGIENGTQF 116 + E+ D+YVTLEPC C+ A+ A+++ +Y G NPK G G + Sbjct: 53 --AGELAQGADVYVTLEPCAHYGKTPPCSKALVEAKVKNVYGGLLDVNPKVAG--KGFKI 108 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A H + G + R+ + FFK Sbjct: 109 LEDAGIH----VEYGFLQDELRKQNEVFFK 134 >gi|153808975|ref|ZP_01961643.1| hypothetical protein BACCAC_03276 [Bacteroides caccae ATCC 43185] gi|149128308|gb|EDM19527.1| hypothetical protein BACCAC_03276 [Bacteroides caccae ATCC 43185] Length = 348 Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust. Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 21/147 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M +E A+N L N P VGAV V + +II + ++ AHAE+ AIR Sbjct: 6 YMRRCIELAKNG-LCNAAPNPMVGAVIVCDGRIIGEGYH----IRCGEAHAEVNAIR--- 57 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + +L +YV+LEPC+ CA I +I R+ G +P G Q Sbjct: 58 SVKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSQVAGRGIQKL 117 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E RQ+I+ F Sbjct: 118 KDA----GREVIVGVLESECRQLIRRF 140 >gi|264677369|ref|YP_003277275.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] gi|299533067|ref|ZP_07046453.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni S44] gi|262207881|gb|ACY31979.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] gi|298718952|gb|EFI59923.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni S44] Length = 170 Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 36/89 (40%), Gaps = 3/89 (3%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74 AQ A P GAV V ++ N D HAE RM + E L Sbjct: 29 AQRATQMGHHPFGAVLVGPDQETVLMEQCN---IDTVNHAESTLARMAATNYTAEFLWSC 85 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGAS 103 LY +EPC MCA A I R+ +G + Sbjct: 86 TLYTNVEPCCMCAGTAYWANIGRIVFGMT 114 >gi|329956196|ref|ZP_08296876.1| riboflavin biosynthesis protein RibD [Bacteroides clarus YIT 12056] gi|328524670|gb|EGF51731.1| riboflavin biosynthesis protein RibD [Bacteroides clarus YIT 12056] Length = 347 Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust. Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 21/147 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ++ AQN L N P VGAV V + KII + ++ AHAE+ AIR Sbjct: 6 YMRRCIQLAQNG-LCNAAPNPMVGAVVVCDGKIIGEGYH----VRCGEAHAEVNAIR--- 57 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + +L +YV+LEPC+ CA I +I R+ G +P G Q Sbjct: 58 SVKEPSLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFAKVAGRGIQKL 117 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ EQ R +I+ F Sbjct: 118 KDA----GREVTVGVLEQECRNLIRRF 140 >gi|50303913|ref|XP_451904.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641036|emb|CAH02297.1| KLLA0B08437p [Kluyveromyces lactis] Length = 152 Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 6/102 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59 KKG M A EEA +P+G + L +I+ N + T H E + Sbjct: 6 KKG---MDKAYEEAAIGYKEGGVPIGGCLIDNLTGEILGSGHNMRFQKGSPTLHGETSTL 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 R L + +Y TL PC MC AI L I R+ G Sbjct: 63 ENAGR-LKGSVYKHCTMYTTLSPCDMCTGAILLYGIGRVVVG 103 >gi|253564134|ref|ZP_04841591.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_2_5] gi|251947910|gb|EES88192.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_2_5] gi|301161570|emb|CBW21110.1| putative riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacteroides fragilis 638R] Length = 340 Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 17/126 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V +II ++ AHAE+ AIR + +L +YV+LEPC+ Sbjct: 21 VGAVIVCEGQIIGEG----YHIRCGEAHAEVNAIR---SVKDPSLLKHSTIYVSLEPCSH 73 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I +I R+ G +P G Q A C E+ G+ E R+ Sbjct: 74 HGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGKGIQKLRDAGC----EVIVGVLEPECRE 129 Query: 140 IIQDFF 145 +I+ F Sbjct: 130 LIRKFI 135 >gi|302900034|ref|XP_003048181.1| hypothetical protein NECHADRAFT_93328 [Nectria haematococca mpVI 77-13-4] gi|256729113|gb|EEU42468.1| hypothetical protein NECHADRAFT_93328 [Nectria haematococca mpVI 77-13-4] Length = 166 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 8/127 (6%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A+ A+ A + P G+V V + K++ NR D T H E R + LS Sbjct: 13 AVSLAREALQAGDFPFGSVLVSASGKVLQTDRNRETTGSDSTLHPEFTLARWAEQNLSPT 72 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP--- 126 E +Y + E C MC+AA + + R+ Y +S + G + Y + SP Sbjct: 73 ERAESTVYTSGEHCAMCSAAHAWCGLGRIVYASSTEQLGAWRD---EYGIGKSPVSPLSI 129 Query: 127 -EIYPGI 132 ++ PGI Sbjct: 130 QQVAPGI 136 >gi|229047052|ref|ZP_04192675.1| Riboflavin biosynthesis protein [Bacillus cereus AH676] gi|228724291|gb|EEL75625.1| Riboflavin biosynthesis protein [Bacillus cereus AH676] Length = 358 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 25/149 (16%) Query: 8 MSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M ALE A+ A++ + VG+V V +N+I+ + +K HAEI AIRM Sbjct: 1 MKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-- 52 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + E + +YVTLEPC+ CA AI A I+++ +P G + Sbjct: 53 ---AGEQVRGATIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKIL 109 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ G+ E+ S+++ + F K Sbjct: 110 QDAGI----EVLVGVCEEESKKMNEVFNK 134 >gi|322420507|ref|YP_004199730.1| riboflavin biosynthesis protein RibD [Geobacter sp. M18] gi|320126894|gb|ADW14454.1| riboflavin biosynthesis protein RibD [Geobacter sp. M18] Length = 374 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M AL EA+ + VG V V + +++ + ++ K T HAE+ A+R Sbjct: 8 MMRLALSEARKGVGKTAPNPAVGCVIVRDGEVVGKGWHK----KAGTPHAEVHALRA--- 60 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + E+ D YVTLEPC+ CA A+ AR+ R++ +P G + Sbjct: 61 --AGELAAGADAYVTLEPCSHFGKTPPCARALIEARVGRVFVAMVDPNPLVSGRGIKMLQ 118 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ G+ E S +I + F K Sbjct: 119 DAGI----EVEVGLLEAESLEINRPFVK 142 >gi|319957427|ref|YP_004168690.1| riboflavin biosynthesis protein ribd [Nitratifractor salsuginis DSM 16511] gi|319419831|gb|ADV46941.1| riboflavin biosynthesis protein RibD [Nitratifractor salsuginis DSM 16511] Length = 336 Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 19/96 (19%) Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP---KGGGIENGT 114 + + +E+ V LYVTLEPC CA A+S + R+ ++P GGG+E Sbjct: 85 QTVPEELFRGVSLYVTLEPCAHHGRTPSCAWALSRFPLHRVVVATADPIPGHGGGLE--- 141 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF--FKER 148 H E+ G+ E+ +R++++ F ++ER Sbjct: 142 -----ILADHGIEVATGVCEEEARELLEPFLIWQER 172 >gi|225159038|ref|ZP_03725347.1| riboflavin biosynthesis protein RibD [Opitutaceae bacterium TAV2] gi|224802351|gb|EEG20614.1| riboflavin biosynthesis protein RibD [Opitutaceae bacterium TAV2] Length = 388 Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 18/108 (16%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL A+ A N P VGA+ V + +++ + +D HAE R+ Sbjct: 11 FMWQALALARRA-WGNTHPNPMVGAIIVEDGAVVAEGWH----ARDGGPHAE----RVAL 61 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 L + P LYVTLEPC+ C AI A IRR+ GA++P Sbjct: 62 TALGRAPKPGATLYVTLEPCSTHGRTGACCDAIIEAGIRRVVVGATDP 109 >gi|237809037|ref|YP_002893477.1| CMP/dCMP deaminase zinc-binding [Tolumonas auensis DSM 9187] gi|237501298|gb|ACQ93891.1| CMP/dCMP deaminase zinc-binding [Tolumonas auensis DSM 9187] Length = 203 Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 9/118 (7%) Query: 8 MSCALEEAQNAALRNEI-PVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCR 64 M+ A+E A+ LR P ++ V ++S N+ + T H E++AI +G + Sbjct: 42 MTLAIELARQNVLRGTGGPFASIIVHRQSGVLLSVGVNQVVAQNNSTLHGEVMAIMLGEQ 101 Query: 65 ILSQEIL----PEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--NPKGGGIENGTQF 116 L Q L E +L+ + EPC MC AI + ++RL A+ + + G + G F Sbjct: 102 RLQQFSLNSQSGEYELFTSCEPCAMCMGAILWSGVKRLVCAATGEDARAIGFDEGPVF 159 >gi|171779591|ref|ZP_02920547.1| hypothetical protein STRINF_01428 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281693|gb|EDT47127.1| hypothetical protein STRINF_01428 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 351 Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 17/110 (15%) Query: 5 NVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N +MS A+ EA+ N + VGAV V +N +I+R + L+ HAE AI + Sbjct: 3 NYYMSQAIAEAKKGFRQTYTNPL-VGAVIVKDNHVIARGAH----LQYGHEHAEKNAI-L 56 Query: 62 GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 C+ + E L + LYVTLEPC C AI A I+++ G +P Sbjct: 57 HCQ--TPEELVDSTLYVTLEPCHHRGKQPPCTQAILAAGIKKVVVGQLDP 104 >gi|328872021|gb|EGG20391.1| hypothetical protein DFA_07515 [Dictyostelium fasciculatum] Length = 330 Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 32/61 (52%) Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 N ++ AH EI+AI+ I + +Y T EPC+MCA+AI +R + + + Sbjct: 101 NTGKPNMIAHGEIVAIQNCTEIHGISMYTNYSIYTTGEPCSMCASAILWSRFKTVVWSTY 160 Query: 104 N 104 N Sbjct: 161 N 161 >gi|221068442|ref|ZP_03544547.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] gi|220713465|gb|EED68833.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] Length = 170 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 38/93 (40%), Gaps = 3/93 (3%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 A + AQ A P GAV V ++ N D HAE RM + E Sbjct: 25 AQDVAQRATQMGHHPFGAVLVGPDQETVLMEQCN---IDTVNHAESTLARMAATNYTAEF 81 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L LY +EPC MCA A I R+ +G + Sbjct: 82 LWGCTLYTNVEPCCMCAGTAYWANIGRIVFGMT 114 >gi|54401353|gb|AAV34447.1| predicted diaminohydroxyphosphoribosylaminopyrimidine deaminase [uncultured proteobacterium RedeBAC7D11] Length = 366 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 13/96 (13%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV---DLYVTL 80 + VG V V +NKII R + K +HAEI AI + L ++ DL+VTL Sbjct: 25 VKVGCVIVKDNKIIGRGFYQ----KYGGSHAEINAINDVKKKYKTNYLSKLSGSDLFVTL 80 Query: 81 EPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 EPC+ C + +R+ GA +P GI Sbjct: 81 EPCSKKGKTGACVNELKKYDFKRIIVGAKDPTQSGI 116 >gi|152966031|ref|YP_001361815.1| cytosine deaminase [Kineococcus radiotolerans SRS30216] gi|151360548|gb|ABS03551.1| Cytosine deaminase [Kineococcus radiotolerans SRS30216] Length = 165 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 36/147 (24%), Positives = 56/147 (38%), Gaps = 21/147 (14%) Query: 7 FMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + ALE+A+ A +P+G A+ L+ ++ NR + D + H E A R R Sbjct: 22 LLDVALEQARAGAAEGGVPIGAALFTLDGTLLGAGRNRRVQDDDPSVHGETDAFRNAGRR 81 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTLAT 121 S + TL PC C+ + I L G S GG E+G L Sbjct: 82 ASYR---HTVMVTTLSPCWYCSGLVRQFGIGHLLVGESTTFTGGHAWLAEHGVSVTVL-- 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148 + R R ++ F ++R Sbjct: 137 -----------DDDRCRALMTTFIEQR 152 >gi|150864324|ref|XP_001383092.2| tRNA-specific adenosine-34 deaminase subunit [Scheffersomyces stipitis CBS 6054] gi|149385580|gb|ABN65063.2| tRNA-specific adenosine-34 deaminase subunit [Scheffersomyces stipitis CBS 6054] Length = 325 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132 ++ + EPC MC A+ +RI RL Y S+P GG+E Q + EI+ I Sbjct: 248 VFSSHEPCVMCCMALVHSRISRLIYLRSSPSSGGLETNYQLGDREGLNWKFEIWKWI 304 >gi|54294122|ref|YP_126537.1| riboflavin biosynthesis protein RibD [Legionella pneumophila str. Lens] gi|53753954|emb|CAH15425.1| Riboflavin biosynthesis protein RibD [Legionella pneumophila str. Lens] Length = 357 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 11/79 (13%) Query: 7 FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 F+ ALE+A+ VGAVAV N II++A +R T HAE L + + Sbjct: 5 FLLAALEQAKLGRGFCAPNPSVGAVAVQNGNIIAQAWHRGAG----TPHAEQLLLS---Q 57 Query: 65 ILSQEILPEVDLYVTLEPC 83 IL Q P V LYVTLEPC Sbjct: 58 ILPQT--PGVTLYVTLEPC 74 >gi|315444248|ref|YP_004077127.1| cytosine/adenosine deaminase [Mycobacterium sp. Spyr1] gi|315262551|gb|ADT99292.1| cytosine/adenosine deaminase [Mycobacterium sp. Spyr1] Length = 159 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 2/94 (2%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR-ELKDVTAHAEILAIRMGCRILSQEI 70 +E A+ A + P G++ +L+ ++R +RNR + D T H E + LS + Sbjct: 15 VELAREAQEAGDEPFGSL-LLDADGVTRVEDRNRVKDGDATRHPEYAIAKWAVENLSPDD 73 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +Y + E CTMCAAA + + R+ Y AS+ Sbjct: 74 RARATVYTSGEHCTMCAAAHAWVGLGRVVYAASS 107 >gi|294885496|ref|XP_002771343.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239874872|gb|EER03159.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 76 Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 30/53 (56%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 FM AL AQ A +E+PVG V N +++ AGN ++ T HAE++A Sbjct: 22 FMRLALAAAQEAYDTDEVPVGCAFVSNGVVLATAGNETNHTRNATRHAELVAT 74 >gi|330804193|ref|XP_003290082.1| hypothetical protein DICPUDRAFT_154567 [Dictyostelium purpureum] gi|325079791|gb|EGC33374.1| hypothetical protein DICPUDRAFT_154567 [Dictyostelium purpureum] Length = 321 Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 30/61 (49%) Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 N ++ +H EI+AI + + LY T EPC MCA+A+ A + + +G Sbjct: 98 NMGKPNIISHGEIVAINNCTAMHGITVFTNYTLYTTGEPCAMCASALLWADFKTIVWGTY 157 Query: 104 N 104 N Sbjct: 158 N 158 >gi|307609932|emb|CBW99459.1| riboflavin biosynthesis protein RibD [Legionella pneumophila 130b] Length = 357 Score = 42.0 bits (97), Expect = 0.032, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 11/79 (13%) Query: 7 FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 F+ ALE+A+ VGAVAV N II++A +R T HAE L + + Sbjct: 5 FLLAALEQAKLGRGFCAPNPSVGAVAVQNGNIIAQAWHRGAG----TPHAEQLLLS---Q 57 Query: 65 ILSQEILPEVDLYVTLEPC 83 IL Q P V LYVTLEPC Sbjct: 58 ILPQT--PGVTLYVTLEPC 74 >gi|212703995|ref|ZP_03312123.1| hypothetical protein DESPIG_02048 [Desulfovibrio piger ATCC 29098] gi|212672588|gb|EEB33071.1| hypothetical protein DESPIG_02048 [Desulfovibrio piger ATCC 29098] Length = 188 Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 6/95 (6%) Query: 8 MSCALEEAQNAALRNEI-PVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+E A+ L + P GA + +++S A N +D T HAE+ A+R Sbjct: 32 MLAAIEAAREGMLSGKGGPFGALITDPAGRVVSVACNEVLASRDCTMHAEVAALRK---- 87 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + L LY T PC MC AI +R+ LYY Sbjct: 88 VGHLDLRGHTLYATGFPCVMCLGAILWSRVSTLYY 122 >gi|254466662|ref|ZP_05080073.1| guanine deaminase [Rhodobacterales bacterium Y4I] gi|206687570|gb|EDZ48052.1| guanine deaminase [Rhodobacterales bacterium Y4I] Length = 164 Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 8/123 (6%) Query: 11 ALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 AL EA+ A +P A V + +++ N E D TAHAE+ AIR C + Sbjct: 20 ALSEARVA--EGGVPFSAQVVSADGRVLGAGVNTVMEDHDPTAHAEVCAIRDACARHGRT 77 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLATCHHSPE 127 L L + EPC +C A A + + Y S + G GT + L+ PE Sbjct: 78 NLAGTVLLASGEPCALCYMAALFAGVSEVLYAVSADEAARYGYGYGTSYRLLSGF---PE 134 Query: 128 IYP 130 +P Sbjct: 135 HFP 137 >gi|29827131|ref|NP_821765.1| cytidine/deoxycytidine deaminase [Streptomyces avermitilis MA-4680] gi|29604229|dbj|BAC68300.1| putative cytidine/deoxycytidine deaminase [Streptomyces avermitilis MA-4680] Length = 145 Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 8/102 (7%) Query: 15 AQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73 A +A + P G++ + I++ A N R D+ AH E+ R R L+ Sbjct: 17 AAHAVTLGDAPYGSLLTGPDGAILAEAHNTVRRDNDIAAHPELKLARWAARELAPAAAAR 76 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGAS-------NPKGG 108 +Y + +PCTMCA I + I R+ Y S NP+ G Sbjct: 77 TTMYTSCQPCTMCAGGIVRSGIGRVVYALSTEQLVELNPQSG 118 >gi|308174118|ref|YP_003920823.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus amyloliquefaciens DSM 7] gi|307606982|emb|CBI43353.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus amyloliquefaciens DSM 7] gi|328552752|gb|AEB23244.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus amyloliquefaciens TA208] gi|328912449|gb|AEB64045.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus amyloliquefaciens LL3] Length = 371 Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 19/108 (17%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M+ A+E A+ + + P VGAV V N +I+ + L+ AHAE+ AI M Sbjct: 5 YMNTAIELARRGEGQTQ-PNPLVGAVVVKNGQIVGMGAH----LQYGEAHAEVHAINMAG 59 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 DLYVTLEPC+ CA I + I+R++ +P Sbjct: 60 SHAKG-----ADLYVTLEPCSHYGKTPPCAELIMKSGIKRVFIAVEDP 102 >gi|238925477|ref|YP_002938994.1| riboflavin biosynthesis protein [Eubacterium rectale ATCC 33656] gi|238877153|gb|ACR76860.1| riboflavin biosynthesis protein [Eubacterium rectale ATCC 33656] Length = 394 Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 25/108 (23%) Query: 26 VGAVAVLNNKIISRAGN-RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 VGAV V + +II + R EL HAE A++ C+ Q D+YVTLEPC Sbjct: 33 VGAVIVKDGRIIGEGWHERYGEL-----HAERNALKH-CKESPQG----ADMYVTLEPCC 82 Query: 85 M------CAAAISLARIRRLYYGASNPK----GGGI----ENGTQFYT 118 C A+ A I+R+Y G+ +P GGGI E+G + T Sbjct: 83 HHGKQPPCVEAVIEAGIKRVYVGSDDPNPLVAGGGIKILKEHGIEVVT 130 >gi|82541649|ref|XP_725051.1| cytidine/deoxycytidylate deaminase [Plasmodium yoelii yoelii str. 17XNL] gi|23479911|gb|EAA16616.1| Cytidine and deoxycytidylate deaminase zinc-binding region, putative [Plasmodium yoelii yoelii] Length = 378 Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust. Identities = 17/59 (28%), Positives = 34/59 (57%) Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 Y+T EPC MCA A+ +RI+ + + N + G + + + + L + +H ++Y + E+ Sbjct: 319 YLTHEPCFMCAMAMVHSRIKCVIFDKVNKENGALFSRGKLHCLKSLNHHFKVYKTVREK 377 >gi|299743335|ref|XP_001835696.2| hypothetical protein CC1G_07120 [Coprinopsis cinerea okayama7#130] gi|298405607|gb|EAU86041.2| hypothetical protein CC1G_07120 [Coprinopsis cinerea okayama7#130] Length = 480 Score = 41.6 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 32/58 (55%) Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 S +L +++T EPC MC+ A+ +R+R ++Y PK GG + T TL +H Sbjct: 379 SNYLLTNQTIFLTHEPCIMCSMALLHSRVREVFYLYPMPKTGGCGSLTCLPTLKGVNH 436 >gi|91087043|ref|XP_974513.1| PREDICTED: similar to cytidine and deoxycytidylate deaminase zinc-binding region [Tribolium castaneum] gi|270010523|gb|EFA06971.1| hypothetical protein TcasGA2_TC009931 [Tribolium castaneum] Length = 317 Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 +Y T EPC CA A+ +R +R++YG + K G + + + + + +H E + G+ E+ Sbjct: 255 VYCTTEPCITCAMALVHSRAKRVFYGVKSAK-GALGSLCKIHVVENLNHHYEAFSGLLEE 313 Query: 136 RSR 138 R Sbjct: 314 ECR 316 >gi|88799403|ref|ZP_01114981.1| hypothetical protein MED297_17393 [Reinekea sp. MED297] gi|88777942|gb|EAR09139.1| hypothetical protein MED297_17393 [Reinekea sp. MED297] Length = 161 Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Query: 24 IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 +P A+ V N +II + N+ + D TAHAEI AIR L + L V+ EP Sbjct: 30 LPFAAIVVDQNGEIIGKGVNQVAKHLDCTAHAEIQAIREASGNEKTVSLKGMILIVSGEP 89 Query: 83 CTMCAAAISLARIRRL 98 C +C AI +A I ++ Sbjct: 90 CALCYMAIRMAEIMKV 105 >gi|326793664|ref|YP_004311484.1| CMP/dCMP deaminase zinc-binding protein [Marinomonas mediterranea MMB-1] gi|326544428|gb|ADZ89648.1| CMP/dCMP deaminase zinc-binding protein [Marinomonas mediterranea MMB-1] Length = 162 Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 29/55 (52%) Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 D+T HAE + + + L + LY++ EPC MCA + A + R+ YG S Sbjct: 57 DMTGHAERKLMTRASKAYRPDFLAKCTLYISAEPCAMCAGSAYWAGVGRVVYGLS 111 >gi|145223166|ref|YP_001133844.1| CMP/dCMP deaminase, zinc-binding [Mycobacterium gilvum PYR-GCK] gi|145215652|gb|ABP45056.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium gilvum PYR-GCK] Length = 146 Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 4/104 (3%) Query: 7 FMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A+EEA+ IP+G A+ + ++ NR +L D + HAE A R R Sbjct: 6 MLDVAVEEARKGLAEGGIPIGAALFAADGTLLGSGHNRRVQLDDPSLHAETDAFRNAGR- 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 Q + TL PC C+ + I + G S GG Sbjct: 65 --QRGYRSTTMVTTLSPCWYCSGLVRQFNIGTVVIGESRTFTGG 106 >gi|312195390|ref|YP_004015451.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c] gi|311226726|gb|ADP79581.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c] Length = 154 Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 1/77 (1%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + NR D TAHAE +AIR+ + + L + + EPC Sbjct: 26 PYGAVLVTADGQAVEERNRVVTTSDPTAHAESMAIRVAAKTWGID-LSGATMVASFEPCP 84 Query: 85 MCAAAISLARIRRLYYG 101 MC AI A I L G Sbjct: 85 MCCGAILEAGITVLAIG 101 >gi|301054889|ref|YP_003793100.1| riboflavin biosynthesis protein ribD [Bacillus anthracis CI] gi|300377058|gb|ADK05962.1| riboflavin biosynthesis protein ribD [Bacillus cereus biovar anthracis str. CI] Length = 367 Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 25/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M + ++M ALE A+ A++ + VG+V V +N+I+ + +K HAEI Sbjct: 1 MLEHELYMKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGIGAH----MKAGEPHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 AIRM + E +YVTLEPC+ CA AI A I+++ +P Sbjct: 55 HAIRM-----AGEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVS 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A E+ G+ E+ S+++ + F K Sbjct: 110 GRGIKILQDAGI----EVLVGVCEEESKKMNEVFNK 141 >gi|291524228|emb|CBK89815.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Eubacterium rectale DSM 17629] Length = 386 Score = 41.6 bits (96), Expect = 0.041, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 25/108 (23%) Query: 26 VGAVAVLNNKIISRAGN-RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 VGAV V + +II + R EL HAE A++ C+ Q D+YVTLEPC Sbjct: 27 VGAVIVKDGRIIGEGWHERYGEL-----HAERNALKH-CKESPQG----ADMYVTLEPCC 76 Query: 85 M------CAAAISLARIRRLYYGASNPK----GGGI----ENGTQFYT 118 C A+ A I+R+Y G+ +P GGGI E+G + T Sbjct: 77 HHGKQPPCVEAVIEAGIKRVYVGSDDPNPLVAGGGIKILKEHGIEVVT 124 >gi|239624923|ref|ZP_04667954.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521309|gb|EEQ61175.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 161 Score = 41.6 bits (96), Expect = 0.041, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 31/72 (43%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 I+ N KD TAH + +R S L E +Y +EPC MC A+ Sbjct: 38 EGDILMEQKNEAGTQKDPTAHDVMALVRRAVHEYSPGQLQECTVYALMEPCVMCMGALFW 97 Query: 93 ARIRRLYYGASN 104 A+I R+ Y S Sbjct: 98 AKIGRVKYAMSE 109 >gi|120434994|ref|YP_860680.1| bifunctional riboflavin biosynthesis protein RibD [Gramella forsetii KT0803] gi|117577144|emb|CAL65613.1| bifunctional riboflavin biosynthesis protein RibD [Gramella forsetii KT0803] Length = 347 Score = 41.6 bits (96), Expect = 0.041, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 ++ +E AQN L P VG+V V NKII ++ K HAE+ AI Sbjct: 7 YIKRCIELAQNG-LGTTYPNPMVGSVIVYKNKIIGEGWHK----KAGEPHAEVNAIN--- 58 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + Q +L +YV+LEPC+ C+ I I+++ G +P G + Sbjct: 59 SVKDQSLLKHAIIYVSLEPCSHFGKTPPCSDLIIAKGIKKVIIGTMDPFAKVAGRGIKKL 118 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 A C E+ GI E+ ++ + FF Sbjct: 119 MDAGC----EVNVGILEEECLELNKRFF 142 >gi|330796315|ref|XP_003286213.1| hypothetical protein DICPUDRAFT_30558 [Dictyostelium purpureum] gi|325083800|gb|EGC37243.1| hypothetical protein DICPUDRAFT_30558 [Dictyostelium purpureum] Length = 226 Score = 41.6 bits (96), Expect = 0.042, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 29/61 (47%) Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 N ++ +H EI+AI + + LY T EPC MCA A+ A + + +G Sbjct: 98 NMGKPNIISHGEIVAINNCTELHGITVFTNYTLYTTGEPCAMCAGALVWADFKTVVWGTY 157 Query: 104 N 104 N Sbjct: 158 N 158 >gi|319645199|ref|ZP_07999432.1| RibD protein [Bacillus sp. BT1B_CT2] gi|317393008|gb|EFV73802.1| RibD protein [Bacillus sp. BT1B_CT2] Length = 362 Score = 41.6 bits (96), Expect = 0.042, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 27/120 (22%) Query: 7 FMSCALE-----EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE E Q A N + VGAV V + +++ + LK AHAE+ AI+M Sbjct: 6 YMNLALELARQGEGQTGA--NPL-VGAVVVKDGEVVGMGAH----LKYGEAHAEVHAIQM 58 Query: 62 GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111 R ++ YVTLEPC+ CA I + ++R+ A +P G GIE Sbjct: 59 AGRHAEGAVI-----YVTLEPCSHYGKTPPCAELIIRSGLKRVVVAAEDPNPLVSGRGIE 113 >gi|70954102|ref|XP_746114.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56526631|emb|CAH78767.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 294 Score = 41.2 bits (95), Expect = 0.042, Method: Compositional matrix adjust. Identities = 16/59 (27%), Positives = 34/59 (57%) Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 Y+T EPC MCA A+ +R++ + + N + G + + + + L + +H ++Y + E+ Sbjct: 235 YLTHEPCFMCAMAMVHSRVKCVIFDKVNKQNGALFSKGKLHCLKSLNHHFKVYKTVREK 293 >gi|52080843|ref|YP_079634.1| riboflavin-specific deaminase [Bacillus licheniformis ATCC 14580] gi|52786214|ref|YP_092043.1| hypothetical protein BLi02475 [Bacillus licheniformis ATCC 14580] gi|52004054|gb|AAU23996.1| riboflavin-specific deaminase [Bacillus licheniformis ATCC 14580] gi|52348716|gb|AAU41350.1| RibD [Bacillus licheniformis ATCC 14580] Length = 362 Score = 41.2 bits (95), Expect = 0.042, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 27/120 (22%) Query: 7 FMSCALE-----EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE E Q A N + VGAV V + +++ + LK AHAE+ AI+M Sbjct: 6 YMNLALELARQGEGQTGA--NPL-VGAVVVKDGEVVGMGAH----LKYGEAHAEVHAIQM 58 Query: 62 GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111 R ++ YVTLEPC+ CA I + ++R+ A +P G GIE Sbjct: 59 AGRHAEGAVI-----YVTLEPCSHYGKTPPCAELIIRSGLKRVVVAAEDPNPLVSGRGIE 113 >gi|148358764|ref|YP_001249971.1| riboflavin biosynthesis protein RibD [Legionella pneumophila str. Corby] gi|296106809|ref|YP_003618509.1| riboflavin biosynthesis protein [Legionella pneumophila 2300/99 Alcoy] gi|148280537|gb|ABQ54625.1| riboflavin biosynthesis protein RibD [Legionella pneumophila str. Corby] gi|295648710|gb|ADG24557.1| riboflavin biosynthesis protein [Legionella pneumophila 2300/99 Alcoy] Length = 357 Score = 41.2 bits (95), Expect = 0.043, Method: Compositional matrix adjust. Identities = 34/81 (41%), Positives = 42/81 (51%), Gaps = 15/81 (18%) Query: 7 FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 F+ ALE+A+ VGAVAV N II++A +R T HAE L Sbjct: 5 FLLAALEQAKLGRGFCAPNPSVGAVAVQNGNIIAQAWHRGAG----TPHAEQL------- 53 Query: 65 ILSQ--EILPEVDLYVTLEPC 83 +LSQ PEV LY+TLEPC Sbjct: 54 LLSQIPPQTPEVTLYITLEPC 74 >gi|313674792|ref|YP_004052788.1| cmp/dcmp deaminase zinc-binding protein [Marivirga tractuosa DSM 4126] gi|312941490|gb|ADR20680.1| CMP/dCMP deaminase zinc-binding protein [Marivirga tractuosa DSM 4126] Length = 138 Score = 41.2 bits (95), Expect = 0.044, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74 A + A + P GAV V + + +G L AHAEI AI + L + E+ Sbjct: 10 AIDLAKERKTPFGAVLV-DPEGQHVSGYNTTILDGAVAHAEINAISK-IKQLDYDRAEEL 67 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYG 101 L+ T+EPC MC +AI A I + YG Sbjct: 68 TLFTTVEPCPMCMSAIIWAGIGEVIYG 94 >gi|296105681|ref|YP_003617381.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila 2300/99 Alcoy] gi|295647582|gb|ADG23429.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila 2300/99 Alcoy] Length = 160 Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%) Query: 25 PVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P GA+ V ++K I+ ++ N H E+ I + ++ LY T EPC Sbjct: 31 PYGAIIVYDDKEILLKSVNSAHH--HPLMHGELSVIHTLFNNGFDGDVSKLSLYTTAEPC 88 Query: 84 TMCAAAISLARIRRLYYGAS 103 MCAAAI A I ++ YG+S Sbjct: 89 PMCAAAIYWAMIPKVVYGSS 108 >gi|167946681|ref|ZP_02533755.1| hypothetical protein Epers_09088 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 112 Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 5/68 (7%) Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT---CHHSPEIYPGISEQRSRQII 141 MCA AI AR++R+ Y AS+P+ G G+ F L + +H E G+ +S + Sbjct: 1 MCAGAIVHARVKRVVYAASDPRSGAA--GSVFDLLPSDQRFNHRVESEGGLLSGQSANRL 58 Query: 142 QDFFKERR 149 +DFF+ RR Sbjct: 59 RDFFRARR 66 >gi|282866591|ref|ZP_06275633.1| DEAD/DEAH box helicase domain protein [Streptomyces sp. ACTE] gi|282558493|gb|EFB64053.1| DEAD/DEAH box helicase domain protein [Streptomyces sp. ACTE] Length = 537 Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 20/150 (13%) Query: 14 EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73 E Q AL+ + V V +++ AG R +L +H +L + +L LP+ Sbjct: 141 EPQVEALKKGVDV--VVGTPGRLLDLAGQRKLDL----SHIRVLVLDEADEMLDLGFLPD 194 Query: 74 VDLYVTLEPC---------TMCAAAISLAR---IRRLYYGASNP--KGGGIENGTQFYTL 119 V+ +T+ P TM A ISLAR + + A++P +G ++N TQF Sbjct: 195 VERIITMLPAKRQTMLFSATMPGAVISLARRYMSQPTHINATSPDDEGTTVKNTTQFVYR 254 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A PE+ I + SR + F + +R Sbjct: 255 AHSMDKPEMVSRILQAESRGLAMIFCRTKR 284 >gi|225620931|ref|YP_002722189.1| riboflavin biosynthesis protein RibD [Brachyspira hyodysenteriae WA1] gi|225215751|gb|ACN84485.1| riboflavin biosynthesis protein RibD [Brachyspira hyodysenteriae WA1] Length = 360 Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 22/148 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+EEA+ + P VGAV V + K+I ++ K HAEI A Sbjct: 1 MKMAIEEAKKGEGFTSPNPLVGAVIVKDGKVIGIGYHK----KCGENHAEINAFLDAKE- 55 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYG--ASNPKGGGIENGTQFY 117 E + + D+YVTLEPC+ CA AI +++R+ G SNPK G NG + Sbjct: 56 -KGENVEDADIYVTLEPCSHYGKTPPCADAIIKNKLKRVIIGCVDSNPKVAG--NGIKKL 112 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ + E+ R++ + FF Sbjct: 113 KDAGI----EVIVNVLEEECRKLNEVFF 136 >gi|148358330|ref|YP_001249537.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila str. Corby] gi|148280103|gb|ABQ54191.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila str. Corby] Length = 153 Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%) Query: 25 PVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P GA+ V ++K I+ ++ N H E+ I + ++ LY T EPC Sbjct: 24 PYGAIIVYDDKEILLKSVNSAHH--HPLMHGELSVIHTLFNNGFDGDVSKLSLYTTAEPC 81 Query: 84 TMCAAAISLARIRRLYYGAS 103 MCAAAI A I ++ YG+S Sbjct: 82 PMCAAAIYWAMIPKVVYGSS 101 >gi|327398273|ref|YP_004339142.1| CMP/dCMP deaminase zinc-binding protein [Hippea maritima DSM 10411] gi|327180902|gb|AEA33083.1| CMP/dCMP deaminase zinc-binding protein [Hippea maritima DSM 10411] Length = 183 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 4/99 (4%) Query: 8 MSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+E A+ + P GA + K++S N + K HAEI+A M + L Sbjct: 29 MLFAIELAKLSIRNGGGPFGAAIFSKEGKLVSCGVNLVTKEKLSILHAEIVAFIMAQKKL 88 Query: 67 SQEILPE---VDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L E +L+ + EPC MC AI + I+R+ +GA Sbjct: 89 KTYSLSEAGYFELFSSSEPCAMCLGAILWSGIKRVVFGA 127 >gi|317509323|ref|ZP_07966943.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Segniliparus rugosus ATCC BAA-974] gi|316252379|gb|EFV11829.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Segniliparus rugosus ATCC BAA-974] Length = 148 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 5/104 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++ A+ EA+ +P+GA + K++ R NR + D HAE A R R Sbjct: 6 MLATAVAEARAGLAEGGVPIGAALFTRDGKLLGRGHNRRVQWDDPAIHAETDAFRAAGR- 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG-ASNPKGG 108 Q + + TL PC C+ + I + G ASN GG Sbjct: 65 --QRDYRDTVMVTTLSPCWYCSGLVRQFNIGAVIIGEASNFHGG 106 >gi|228922109|ref|ZP_04085419.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228837525|gb|EEM82856.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 360 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 25/149 (16%) Query: 8 MSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M ALE A+ A++ + VG+V V +N+I+ + +K HAEI AIRM Sbjct: 1 MKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-- 52 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 ++E +YVTLEPC+ CA AI A I+++ +P G + Sbjct: 53 ---AEEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKIL 109 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ G+ E+ S+++ + F K Sbjct: 110 QDAGI----EVLVGVCEEESKKMNEVFNK 134 >gi|15893879|ref|NP_347228.1| riboflavin biosynthesis protein RIBD (pirimidine deaminase and pirimidine reductase) [Clostridium acetobutylicum ATCC 824] gi|15023459|gb|AAK78568.1|AE007574_6 Riboflavin biosynthesis protein RIBD (pirimidine deaminase and pirimidine reductase) [Clostridium acetobutylicum ATCC 824] Length = 383 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM ALE A+ + N P VGAV V +NKI+ + K HAE+ A+ M + Sbjct: 23 FMKRALEIAEKGSGYVNPNPMVGAVIVKDNKIVGEGYHE----KFGGNHAEVNALNMAGK 78 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +LYVTLEPC+ CA A+ A I+R+ +P G + Sbjct: 79 DAEGS-----ELYVTLEPCSHYGKTPPCALAVVKAGIKRVIIAMEDPNPLVSTKGIKILK 133 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146 + E+ G+ ++ S ++ + F K Sbjct: 134 ----ENGIEVITGVMKKESEKLNEVFIK 157 >gi|66823805|ref|XP_645257.1| hypothetical protein DDB_G0272442 [Dictyostelium discoideum AX4] gi|60473427|gb|EAL71373.1| hypothetical protein DDB_G0272442 [Dictyostelium discoideum AX4] Length = 241 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 9/92 (9%) Query: 15 AQNAALRNEIPVGAVAVLNNKII----SRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 A + A+ + GA V N + + G +R L H EI AI ++ QE Sbjct: 72 ALDKAIEHNSKFGAAIVHKNGTLMCTAANTGEGSRIL-----HGEIRAILNCTQLYQQET 126 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 + +Y T EPC MC+AA+ + ++ +G+ Sbjct: 127 WEDYYMYTTGEPCPMCSAALLWTKFEKVIFGS 158 >gi|290994440|ref|XP_002679840.1| predicted protein [Naegleria gruberi] gi|284093458|gb|EFC47096.1| predicted protein [Naegleria gruberi] Length = 357 Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 5/61 (8%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKGGGIENGTQFYTL---ATCHHSPEI 128 +DL+++ EPC MCA A+ +RIRR+Y+ N GG I Q Y + + +H ++ Sbjct: 292 LDLFISHEPCCMCAMALLHSRIRRIYFVHECGNNFGGLINKVNQEYCVHENSKLNHHFDV 351 Query: 129 Y 129 Y Sbjct: 352 Y 352 >gi|315443623|ref|YP_004076502.1| cytosine/adenosine deaminase [Mycobacterium sp. Spyr1] gi|315261926|gb|ADT98667.1| cytosine/adenosine deaminase [Mycobacterium sp. Spyr1] Length = 146 Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 4/104 (3%) Query: 7 FMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A+EEA+ IP+G A+ + ++ NR +L D + HAE A R R Sbjct: 6 MLDVAVEEARKGLAEGGIPIGAALFAADGTLLGSGHNRRVQLDDPSLHAETDAFRNAGR- 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 Q + TL PC C+ + I + G S GG Sbjct: 65 --QRGYRSTTMVTTLSPCWYCSGLVRQFNIGAVVIGESRTFTGG 106 >gi|224536352|ref|ZP_03676891.1| hypothetical protein BACCELL_01226 [Bacteroides cellulosilyticus DSM 14838] gi|224522049|gb|EEF91154.1| hypothetical protein BACCELL_01226 [Bacteroides cellulosilyticus DSM 14838] Length = 348 Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust. Identities = 45/148 (30%), Positives = 64/148 (43%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ++ AQN L N P VGAV V + KII ++ AHAE+ AIR Sbjct: 9 YMRRCIQLAQNG-LCNAAPNPMVGAVIVCDGKIIGEG----YHVRCGKAHAEVNAIR--- 60 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + +L +YV+LEPC+ CA I +I R+ G +P G Q Sbjct: 61 SVKETSLLKRSTIYVSLEPCSHHGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGRGIQKL 120 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ E R +I+ F Sbjct: 121 KDA----GREVIVGVLEDECRHLIKRFI 144 >gi|325508006|gb|ADZ19642.1| Riboflavin biosynthesis protein RIBD (pirimidine deaminase and pirimidine reductase) [Clostridium acetobutylicum EA 2018] Length = 365 Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM ALE A+ + N P VGAV V +NKI+ + K HAE+ A+ M + Sbjct: 5 FMKRALEIAEKGSGYVNPNPMVGAVIVKDNKIVGEGYHE----KFGGNHAEVNALNMAGK 60 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +LYVTLEPC+ CA A+ A I+R+ +P G + Sbjct: 61 DAEGS-----ELYVTLEPCSHYGKTPPCALAVVKAGIKRVIIAMEDPNPLVSTKGIKILK 115 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146 + E+ G+ ++ S ++ + F K Sbjct: 116 ----ENGIEVITGVMKKESEKLNEVFIK 139 >gi|160888034|ref|ZP_02069037.1| hypothetical protein BACUNI_00442 [Bacteroides uniformis ATCC 8492] gi|317478584|ref|ZP_07937741.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 4_1_36] gi|156862533|gb|EDO55964.1| hypothetical protein BACUNI_00442 [Bacteroides uniformis ATCC 8492] gi|316905225|gb|EFV27022.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 4_1_36] Length = 351 Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust. Identities = 46/148 (31%), Positives = 66/148 (44%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ++ AQN L N P VGAV V + KII + ++ AHAE+ AIR Sbjct: 8 YMLRCIQLAQNG-LCNTAPNPMVGAVIVCDGKIIGEGYH----VRCGEAHAEVNAIR--- 59 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + +L +YV+LEPC+ CA I +I R+ G +P G Q Sbjct: 60 SVKDTSLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCRDPFSKVAGRGIQKL 119 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ E RQ+I+ F Sbjct: 120 KDA----GREVIVGVLETECRQLIRRFI 143 >gi|290962921|ref|YP_003494103.1| guanine deaminase [Streptomyces scabiei 87.22] gi|260652447|emb|CBG75580.1| putative guanine deaminase [Streptomyces scabiei 87.22] Length = 226 Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 5/98 (5%) Query: 7 FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A+E+A+ RN P GAV V N H E +A+ R Sbjct: 68 FMRLAVEQAR----RNPAWPFGAVIVATRTGRVPGSGVNSGADSPLLHGEAVAMNDYVRR 123 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 LY T EPC+MC +A+ A +RR+ + S Sbjct: 124 HGNRGWAATTLYTTGEPCSMCMSALVWANVRRVVWAGS 161 >gi|168059034|ref|XP_001781510.1| predicted protein [Physcomitrella patens subsp. patens] gi|162667051|gb|EDQ53690.1| predicted protein [Physcomitrella patens subsp. patens] Length = 155 Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 8/120 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A+ EA+ + IP+GA +++ R NR + D + HAE A R R Sbjct: 1 MLDVAIAEARTGLGEDGIPIGAALFDAGGQLLGRGRNRRVQENDPSVHAETDAFRKAGR- 59 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLAT 121 Q + + TL PC C+ + I + G + GG+ ENG Q L + Sbjct: 60 --QRSYRDTIMVTTLAPCWYCSGLVRQFNIGTVVVGETVNFQGGVAWLRENGVQVVDLQS 117 >gi|307107383|gb|EFN55626.1| hypothetical protein CHLNCDRAFT_133790 [Chlorella variabilis] Length = 449 Score = 41.2 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 32/55 (58%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 D YV EPCTMCA A+ +R+RR+ + ++ + G + + + + +H ++Y Sbjct: 386 DCYVLREPCTMCAMALVHSRLRRVVFCCADRRYGALGGAFRLHAQRSLNHHYQVY 440 >gi|332291081|ref|YP_004429690.1| riboflavin biosynthesis protein RibD [Krokinobacter diaphorus 4H-3-7-5] gi|332169167|gb|AEE18422.1| riboflavin biosynthesis protein RibD [Krokinobacter diaphorus 4H-3-7-5] Length = 333 Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 27/158 (17%) Query: 1 MKKGNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MK N +++ + A+N A+ N VGAV V NNKII+ + HAE+ Sbjct: 1 MKIHNTYINRCIALAKNGLPVAMPNP-SVGAVLVHNNKIIAEGYTSDYG----GPHAEVN 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KG 107 I + + E++ + LYV+LEPC+ CA + + I+++ G +P G Sbjct: 56 CIAF-AKANTPELIAKSTLYVSLEPCSHWGKTPPCADLVVASGIKKVVIGTIDPFAKVAG 114 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 GI+ Q T G+ E+ ++I + FF Sbjct: 115 AGIKRLIQAGVDVTV--------GVQEKECQEINKRFF 144 >gi|229110810|ref|ZP_04240373.1| Riboflavin biosynthesis protein [Bacillus cereus Rock1-15] gi|228672689|gb|EEL27970.1| Riboflavin biosynthesis protein [Bacillus cereus Rock1-15] Length = 348 Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 19/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +N+I+ + +K HAEI AIRM + E + +YVTLEPC+ Sbjct: 11 VGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-----AGEQVRGATIYVTLEPCSH 61 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA AI A I+++ +P G + A E+ G+ E+ S++ Sbjct: 62 HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGI----EVLVGVCEEESKK 117 Query: 140 IIQDFFK 146 + + F K Sbjct: 118 VNEVFNK 124 >gi|228986473|ref|ZP_04146609.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228773294|gb|EEM21724.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 358 Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 25/149 (16%) Query: 8 MSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M ALE A+ A++ + VG+V V +N+I+ + +K HAEI AIRM Sbjct: 1 MKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGIGAH----MKAGEPHAEIHAIRM-- 52 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + E +YVTLEPC+ CA AI A I+R+ +P G Q Sbjct: 53 ---AGEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKRVVVATLDPNPLVSGRGIQIL 109 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A ++ G+ E+ S+++ + F K Sbjct: 110 QDAGI----DVLVGVCEEESKKMNEVFNK 134 >gi|206890490|ref|YP_002249110.1| riboflavin biosynthesis protein RibD [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742428|gb|ACI21485.1| riboflavin biosynthesis protein RibD [Thermodesulfovibrio yellowstonii DSM 11347] Length = 370 Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 28/132 (21%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VGAV V N KIIS ++ L HAE AIR + E L LYVTLEPC Sbjct: 32 VGAVIVKNGKIISEGYHKKAGL----PHAEAEAIRN-----ANESLKGATLYVTLEPCCH 82 Query: 84 -----TMCAAAISLARIRRLYYGASNP----KGGGIENGTQFYTLATCHHSPEIYPGISE 134 C AI + I R+ G +P G G+E +H ++ G+ E Sbjct: 83 KDKKTPPCTDAIINSGINRVVIGMRDPNPKVSGKGVE--------ILNNHGIKVIEGVLE 134 Query: 135 QRSRQIIQDFFK 146 + +++ + + K Sbjct: 135 EEVKKLNEFYIK 146 >gi|323145928|gb|ADX32169.1| hypothetical protein [Pseudomonas phage P3_CHA] gi|323146114|gb|ADX32354.1| hypothetical protein [Pseudomonas phage PAK_P3] Length = 138 Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 49/112 (43%), Gaps = 17/112 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN----------RNRE--LKD 49 K FM CA E ++ VGAV V NKIIS+ N N E + Sbjct: 4 KHKEAFMRCA-ESFAECSVGVRAKVGAVIVQGNKIISQGYNGLPSGLEGPLENEEGVTRP 62 Query: 50 VTAHAEILAI-RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE A+ + C SQE ++ T+ PC CA I A I+R+YY Sbjct: 63 EVRHAEKNALLWLSC---SQESAQGAWMFATMSPCEYCAHDIVDAGIKRVYY 111 >gi|325962810|ref|YP_004240716.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans Sphe3] gi|323468897|gb|ADX72582.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans Sphe3] Length = 161 Score = 41.2 bits (95), Expect = 0.055, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 4/93 (4%) Query: 12 LEEAQNAALRNEI----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 LE+A A RN P GA+ V + + NR D TAHAE++AIR + Sbjct: 14 LEQAVELATRNVSEGGGPFGALVVTPDGRVHEGVNRVTRDNDPTAHAEVVAIRAAAAATA 73 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L LY + EPC +C A+ ARI R+Y+ Sbjct: 74 NYDLHGAVLYASCEPCPLCLASALWARIDRVYF 106 >gi|196231665|ref|ZP_03130522.1| riboflavin biosynthesis protein RibD [Chthoniobacter flavus Ellin428] gi|196224137|gb|EDY18650.1| riboflavin biosynthesis protein RibD [Chthoniobacter flavus Ellin428] Length = 344 Score = 40.8 bits (94), Expect = 0.055, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 50/109 (45%), Gaps = 19/109 (17%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL EA+ L P VGAV V KII+R + L HAEI A+R Sbjct: 6 FMRAALAEARRG-LGQTSPNPAVGAVIVRAGKIIARGYHHRAGLP----HAEIEALRA-- 58 Query: 64 RILSQEILPE-VDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 L + L +YVTLEPC+ C AI A RR+ G +P Sbjct: 59 --LPKPALARGATIYVTLEPCSTHGRTPPCVEAIIAAGFRRVVIGTIDP 105 >gi|161830583|ref|YP_001596568.1| riboflavin biosynthesis protein RibD [Coxiella burnetii RSA 331] gi|161762450|gb|ABX78092.1| riboflavin biosynthesis protein RibD [Coxiella burnetii RSA 331] Length = 354 Score = 40.8 bits (94), Expect = 0.055, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 21/97 (21%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-MGCRILSQEILPEVDLYVTLEPCT 84 VGAV V ++KIIS ++ L HAE+ AI+ +G + LYVTLEPC Sbjct: 29 VGAVVVKDDKIISTGFHKRSGL----PHAEVEAIKSLGDKARGAA------LYVTLEPCC 78 Query: 85 M------CAAAISLARIRRLYYGASNPK----GGGIE 111 C I + I+ +YYG +P G GIE Sbjct: 79 HFGKTPPCTDLIIQSGIKDVYYGLHDPNLAVCGKGIE 115 >gi|52142146|ref|YP_084683.1| riboflavin biosynthesis protein; diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus cereus E33L] gi|51975615|gb|AAU17165.1| riboflavin biosynthesis protein; diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus cereus E33L] Length = 367 Score = 40.8 bits (94), Expect = 0.055, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 25/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M + ++M ALE A+ A++ + VG+V V +N+I+ + +K HAEI Sbjct: 1 MLEHELYMKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGIGAH----MKAGEPHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 AIRM + E +YVTLEPC+ CA AI A I+++ +P Sbjct: 55 HAIRM-----AGEQACGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVS 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A E+ G+ E+ S+++ + F K Sbjct: 110 GRGIKILQDAGI----EVLVGVCEEESKKMNEVFNK 141 >gi|330685448|gb|EGG97103.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis VCU121] Length = 347 Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 44/161 (27%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM+ A++ AQ + + PVG+V V + +I+ + L+ HAE+ A+ M Sbjct: 4 FMNYAIQLAQMVDGQTGVNPPVGSVVVKDGRIVGIGAH----LRKGDKHAEVQALDM--- 56 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----------KGG 108 +Q +YV+LEPCT C I A I+++ Y + K Sbjct: 57 --AQSEAKGATIYVSLEPCTHHGSTPPCVDKIIEAGIQKVIYAVKDTTLISKGDDILKNA 114 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 GIE Q+ +A Q+ QDFF +R Sbjct: 115 GIEVEFQYNAVAA-----------------QLYQDFFTAKR 138 >gi|284043456|ref|YP_003393796.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM 14684] gi|283947677|gb|ADB50421.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM 14684] Length = 158 Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL--KDVTAHAEI-LAIRMGC 63 ++ A+ +Q A + P GA+ V ++ A RN + +DV+AH E+ LA+ G Sbjct: 11 WLRMAIALSQQARAAGDEPFGALLVGAGGVL-LAQERNSVVTDRDVSAHPELKLAVWAG- 68 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 R L E+ +Y + E C MCAAA+ A + L Y S Sbjct: 69 RNLDPEVARLTTMYTSCENCAMCAAAMVWANLGTLVYSLSG 109 >gi|294655936|ref|XP_458164.2| DEHA2C11066p [Debaryomyces hansenii CBS767] gi|199430728|emb|CAG86235.2| DEHA2C11066p [Debaryomyces hansenii] Length = 384 Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 4/78 (5%) Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 A R L ++L +Y T EPC MC+ A+ +RI R+ Y P+ GG+ + Q Sbjct: 288 ADRTDLNYLCHDLL----VYTTHEPCIMCSMALVHSRIGRIIYMKGVPETGGLSSNYQLG 343 Query: 118 TLATCHHSPEIYPGISEQ 135 + +I+ I E+ Sbjct: 344 DRDGLNWKYDIWKWIGEE 361 >gi|83589766|ref|YP_429775.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Moorella thermoacetica ATCC 39073] gi|83572680|gb|ABC19232.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Moorella thermoacetica ATCC 39073] Length = 376 Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust. Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 29/153 (18%) Query: 6 VFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +FM+ ALE A+ R VGAV V + +++ ++ K T HAEI A+R Sbjct: 7 IFMARALELARQGLGRTSPNPTVGAVIVRDGQVVGEGYHQ----KAGTPHAEIHALRA-- 60 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK----GGGIENG 113 + E LYVTLEPC C AI A I+R+ ++P GGG Sbjct: 61 ---AGEKARGATLYVTLEPCCHYGRTPPCTEAIIAAGIKRVVAAMADPNPRVAGGGFR-- 115 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ G+ +R++ + F K Sbjct: 116 ------ALSQAGIEVETGLLADEARRLNEAFIK 142 >gi|68073195|ref|XP_678512.1| Cytidine and deoxycytidylate deaminase zinc-binding region [Plasmodium berghei strain ANKA] gi|56499004|emb|CAI00047.1| Cytidine and deoxycytidylate deaminase zinc-binding region, putative [Plasmodium berghei] Length = 317 Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust. Identities = 16/59 (27%), Positives = 33/59 (55%) Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 Y+T EPC MCA A+ +R++ + + N + G + + + + L +H ++Y + E+ Sbjct: 258 YLTHEPCFMCAMAMVHSRVKCVIFDKVNKQNGALFSREKLHCLKNLNHHFKVYKTVREK 316 >gi|163792387|ref|ZP_02186364.1| hypothetical protein BAL199_16108 [alpha proteobacterium BAL199] gi|159182092|gb|EDP66601.1| hypothetical protein BAL199_16108 [alpha proteobacterium BAL199] Length = 163 Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 2/95 (2%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQE 69 ALE A+ A + P G+V V ++ + A +RNR D T H E R + Sbjct: 13 ALELAREALEAGDAPFGSVLVASDGTVL-AEDRNRTGGGDRTRHPEFALARWAAENMKPA 71 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 P +Y + E C MCAAA + R+ Y S+ Sbjct: 72 DRPGATVYTSGEHCPMCAAAHGFVGLGRIVYAGSS 106 >gi|298248927|ref|ZP_06972731.1| riboflavin biosynthesis protein RibD [Ktedonobacter racemifer DSM 44963] gi|297546931|gb|EFH80798.1| riboflavin biosynthesis protein RibD [Ktedonobacter racemifer DSM 44963] Length = 383 Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 56/134 (41%), Gaps = 36/134 (26%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI-RMGCRILSQEILPEVDLYVTLEPCT 84 VGAV V +N++I R HAEI A+ G S DLY TLEPC Sbjct: 27 VGAVIVRDNRVIGRGATS----PPYGPHAEIHALNEAGATAASG-----ADLYTTLEPCC 77 Query: 85 M------CAAAISLARIRRLYYGASNP----KGGGI----ENGTQFYTLATCHHSPEIYP 130 + C AI A IRR+ GA +P G G+ E G T Sbjct: 78 IAIHTPPCTKAIIAAGIRRVIIGALDPNPRVSGRGVAQLREAGINVVT------------ 125 Query: 131 GISEQRSRQIIQDF 144 GI++Q + +I+ F Sbjct: 126 GIAQQETSALIRPF 139 >gi|270295600|ref|ZP_06201801.1| riboflavin biosynthesis protein RibD [Bacteroides sp. D20] gi|270274847|gb|EFA20708.1| riboflavin biosynthesis protein RibD [Bacteroides sp. D20] Length = 351 Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust. Identities = 46/148 (31%), Positives = 66/148 (44%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ++ AQN L N P VGAV V + KII + ++ AHAE+ AIR Sbjct: 8 YMLRCIQLAQNG-LCNTAPNPMVGAVIVCDGKIIGEGYH----VRCGEAHAEVNAIR--- 59 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + +L +YV+LEPC+ CA I +I R+ G +P G Q Sbjct: 60 SVKDTSLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCRDPFSKVAGRGIQKL 119 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ E RQ+I+ F Sbjct: 120 KDA----GREVIVGVLETECRQLIRRFI 143 >gi|268611449|ref|ZP_06145176.1| putative Cytidine/deoxycytidylate deaminase, zinc-binding region (CMP/dCMP deaminase, zinc-binding) protein [Ruminococcus flavefaciens FD-1] Length = 210 Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 23/107 (21%) Query: 14 EAQNAALRNEIPVGAVAVLNNKIISRAGN---------RNRELKDVTAHAEILAIRMGCR 64 EA +A +P GAV I R GN +N ++ T+H+ I AI Sbjct: 15 EAWDAMKSGSVPSGAV------IYDREGNLLAESHNGFKNTDVNPYTSHSCINAINQ-LS 67 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARI-------RRLYYGASN 104 + + E + +Y ++EPC MC AI+++ I R L+YGA++ Sbjct: 68 LRNVESNSGLTIYSSMEPCFMCLGAIAISNIKEIHSASRDLFYGAAH 114 >gi|2493562|sp|P70814|RIBD_BACAM RecName: Full=Riboflavin biosynthesis protein RibD; Includes: RecName: Full=Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase; Includes: RecName: Full=5-amino-6-(5-phosphoribosylamino)uracil reductase; AltName: Full=HTP reductase gi|1592688|emb|CAA65189.1| deaminase [Bacillus amyloliquefaciens] Length = 371 Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 19/108 (17%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M+ A+E A+ + + P VGAV V +I+ + L+ AHAE+ AI M Sbjct: 5 YMNTAIELARRGEGQTQ-PNPLVGAVVVKKRQIVGMGAH----LQYGEAHAEVHAINMAG 59 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + DLYVTLEPC+ CA I + I+R++ +P Sbjct: 60 SLAKG-----ADLYVTLEPCSHYGKTPPCAELIMKSGIKRVFIAVEDP 102 >gi|170721237|ref|YP_001748925.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida W619] gi|169759240|gb|ACA72556.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida W619] Length = 169 Score = 40.8 bits (94), Expect = 0.059, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 2/91 (2%) Query: 15 AQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILP 72 A+ + R P A VA ++I+ AGN + + D T HAE++A + + L E L Sbjct: 27 AEQSKARGRHPFAAIVADAEGRVIASAGNNSMPPEGDPTQHAELVAAALAAKALPPEALA 86 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 LY + EPC MCA A+ I R+ Y S Sbjct: 87 NCTLYTSAEPCCMCAGAVYWTGIGRVVYALS 117 >gi|226950300|ref|YP_002805391.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A2 str. Kyoto] gi|226842626|gb|ACO85292.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A2 str. Kyoto] Length = 365 Score = 40.8 bits (94), Expect = 0.060, Method: Compositional matrix adjust. Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 29/158 (18%) Query: 1 MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ N +M AL+ A+ + N P VGA+ V NNKII ++ +HAE+ A Sbjct: 1 MEDYNFYMEKALKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFG----GSHAEVYA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108 +R + E +YVTLEPC+ CA +I I + +P +G Sbjct: 57 LRE-----AGEKAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVEGR 111 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 GI+ + E+ GI E+ S+++ + F K Sbjct: 112 GID--------ILKQNGIEVVTGIMEKESKKLNEVFIK 141 >gi|296332262|ref|ZP_06874724.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674964|ref|YP_003866636.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus subtilis subsp. spizizenii str. W23] gi|296150576|gb|EFG91463.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413208|gb|ADM38327.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus subtilis subsp. spizizenii str. W23] Length = 361 Score = 40.8 bits (94), Expect = 0.060, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 17/107 (15%) Query: 7 FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL+ A+ + E VGAV V + +I+ + LK AHAE+ AI M Sbjct: 5 YMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAH----LKYGEAHAEVHAIHMAGS 60 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 D+YVTLEPC+ CA I + I+R++ +P Sbjct: 61 HAKG-----ADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDP 102 >gi|282880496|ref|ZP_06289203.1| riboflavin biosynthesis protein RibD [Prevotella timonensis CRIS 5C-B1] gi|281305599|gb|EFA97652.1| riboflavin biosynthesis protein RibD [Prevotella timonensis CRIS 5C-B1] Length = 314 Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 12/99 (12%) Query: 10 CALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 C Q AL P VGAV V ++II +K AHAE+ A R + Sbjct: 16 CLQLAKQGRALAKPNPMVGAVLVCGDRIIGEG----YHIKYGEAHAEVNAF-AAVRQQDE 70 Query: 69 EILPEVDLYVTLEPCTM------CAAAISLARIRRLYYG 101 +LPE LYV+LEPC+ CA I R++R+ G Sbjct: 71 HLLPESTLYVSLEPCSHYGKTPPCADLIVEKRVKRVVCG 109 >gi|54112139|gb|AAV28742.1| FCY1p [Cryptococcus gattii] Length = 232 Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 11/92 (11%) Query: 23 EIPVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS------QEILP-- 72 + P G V +++++ N+ + H EI AI +L+ QEIL Sbjct: 57 QAPFGTAIVNTTSDELVCVTSNKVGVTGNPAMHGEISAITHCTEVLTGQGWTPQEILAGW 116 Query: 73 -EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 ++ LY EPC MCA+AI A + + YG S Sbjct: 117 KDLSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148 >gi|332529818|ref|ZP_08405772.1| cmp/dcmp deaminase zinc-binding protein [Hylemonella gracilis ATCC 19624] gi|332040839|gb|EGI77211.1| cmp/dcmp deaminase zinc-binding protein [Hylemonella gracilis ATCC 19624] Length = 158 Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 10/88 (11%) Query: 21 RNEI---PVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75 R+E+ P GA+ V + +++ GN D HAE + R E L Sbjct: 16 RDELGRHPFGAILVAPDGETVLAEQGN-----VDTVNHAESVLARTAALNYPGEYLGRCT 70 Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGAS 103 L T+EPC MCA A I RL YG S Sbjct: 71 LVTTVEPCAMCAGTQYWANIGRLVYGLS 98 >gi|330507217|ref|YP_004383645.1| hypothetical protein MCON_1091 [Methanosaeta concilii GP-6] gi|328928025|gb|AEB67827.1| conserved domain protein [Methanosaeta concilii GP-6] Length = 281 Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 22/123 (17%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV----LNNKIISRAGNRNRELK--DVTAHAEI 56 +G+ +M A A+ + P A+ + ++I+ N N+ D TAHAEI Sbjct: 100 EGDRWMQLACLAARESVEEKGGPFAALILQIDNCTDQILRYWINHNQVTSALDPTAHAEI 159 Query: 57 LAIRMGC----------------RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 +AIR C ++ L +Y + EPC MC AAI A I L + Sbjct: 160 MAIRSACASLGVFDLGSIRKDESKLAQPGDLSHCVIYSSAEPCPMCYAAICWANIPMLLF 219 Query: 101 GAS 103 A+ Sbjct: 220 AAT 222 >gi|325180096|emb|CCA14498.1| hypothetical protein SELMODRAFT_438667 [Albugo laibachii Nc14] Length = 313 Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust. Identities = 15/45 (33%), Positives = 27/45 (60%) Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 L+ + D+Y+ +EPC MCA A+ +R+RR+++ N G + Sbjct: 241 LTSYLCTSYDVYLDVEPCVMCAMALIHSRVRRVFFHERNHSHGAL 285 >gi|328767788|gb|EGF77836.1| hypothetical protein BATDEDRAFT_27114 [Batrachochytrium dendrobatidis JAM81] Length = 379 Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 1/56 (1%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 +D+Y+T EPC MCA A+ +RI R++YG + G + + + + + +H +++ Sbjct: 316 LDMYLTREPCAMCAMALVHSRIGRVFYGERR-EYGALGSAYKLHVHPSINHHYQVF 370 >gi|134102530|ref|YP_001108191.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338] gi|291007103|ref|ZP_06565076.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338] gi|133915153|emb|CAM05266.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338] Length = 188 Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust. Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 34/126 (26%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE--------------- 69 P GAV +I++R NR D TAH E+ AIR ++L+ + Sbjct: 25 PFGAVITDGERIVARGQNRVLLTGDPTAHGEVEAIRKAVQVLNPDAPSIAEERQNGSTLA 84 Query: 70 ILPEVD-----------------LYVTLEPCTMCAAAISLARIRRLYYGAS--NPKGGGI 110 ++P + +Y + PC MC +AI +R+ ++Y + + + G Sbjct: 85 LVPRPEGSSDPMPARARMLKGHSIYTSGAPCPMCMSAIYWSRLDAVHYSSDLESTRAIGF 144 Query: 111 ENGTQF 116 ++ Q+ Sbjct: 145 DDAFQY 150 >gi|54112173|gb|AAV28775.1| FCY1p [Cryptococcus gattii] Length = 232 Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 11/92 (11%) Query: 23 EIPVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS------QEILP-- 72 + P G V +++++ N+ + H EI AI +L+ QEIL Sbjct: 57 QAPFGTAIVNTTSDELVCVTSNKVGVTGNPAMHGEISAITHCTEVLTGQGWTPQEILAGW 116 Query: 73 -EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 ++ LY EPC MCA+AI A + + YG S Sbjct: 117 KDLSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148 >gi|294675036|ref|YP_003575652.1| riboflavin biosynthesis protein RibD [Prevotella ruminicola 23] gi|294472928|gb|ADE82317.1| riboflavin biosynthesis protein RibD [Prevotella ruminicola 23] Length = 307 Score = 40.8 bits (94), Expect = 0.064, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 15/104 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM ++ A+N L N P VGAV V N +II + ++ AHAE+ A Sbjct: 7 FMQRCIQLAKNGQL-NAKPNPMVGAVIVHNGRIIGEGYH----VRCGLAHAEVNAF-ASV 60 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYG 101 R + +LPE +YV+LEPC+ CA I +RR+ G Sbjct: 61 RAEDEALLPESTIYVSLEPCSHYGKTPPCADLIIEKGVRRVVVG 104 >gi|212212876|ref|YP_002303812.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Coxiella burnetii CbuG_Q212] gi|212011286|gb|ACJ18667.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Coxiella burnetii CbuG_Q212] Length = 354 Score = 40.8 bits (94), Expect = 0.064, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 21/97 (21%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-MGCRILSQEILPEVDLYVTLEPCT 84 VGAV V ++KIIS ++ L HAE+ AI+ +G + LYVTLEPC Sbjct: 29 VGAVVVKDDKIISTGFHKRSGL----PHAEVEAIKSLGDKARGAA------LYVTLEPCC 78 Query: 85 M------CAAAISLARIRRLYYGASNPK----GGGIE 111 C I + I+ +YYG +P G GIE Sbjct: 79 HFGKTPPCTDLIIQSGIKAVYYGLHDPNLAVCGKGIE 115 >gi|228973365|ref|ZP_04133953.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228786345|gb|EEM34336.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar thuringiensis str. T01001] Length = 358 Score = 40.8 bits (94), Expect = 0.065, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 25/149 (16%) Query: 8 MSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M ALE A+ A++ + VG+V V +N+I+ + +K HAEI AIRM Sbjct: 1 MKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-- 52 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + E +YVTLEPC+ CA AI A I+++ +P G + Sbjct: 53 ---AGEQARGATIYVTLEPCSHYGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKIL 109 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ G+ E+ S+++ + F K Sbjct: 110 QDAGI----EVLVGVCEEESKKMNEVFNK 134 >gi|254442809|ref|ZP_05056285.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Verrucomicrobiae bacterium DG1235] gi|198257117|gb|EDY81425.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Verrucomicrobiae bacterium DG1235] Length = 151 Score = 40.8 bits (94), Expect = 0.065, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 17/114 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 +++ FM A+ EA P VGAV V + +I+++ G+ R D HAE Sbjct: 4 IQRDESFMRAAVCEAVRGDAVKTSPNPRVGAVIVEDGEIVAK-GHFER---DGGPHAE-- 57 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 R L ++ +YVTLEPC+ C AI A IRR+ GAS+P Sbjct: 58 --RQALEALGRKPKEGAVIYVTLEPCSTQGRTGACTDAILEAGIRRVVVGASDP 109 >gi|56566286|gb|AAV98473.1| FCY1 [Cryptococcus neoformans var. neoformans] Length = 225 Score = 40.8 bits (94), Expect = 0.066, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 11/92 (11%) Query: 23 EIPVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL------SQEILP-- 72 + P G V +++++ N+ + H EI AI +L SQEIL Sbjct: 57 QAPFGTAIVNTTSDELVCVTSNKVGITGNPAMHGEISAITYCTEVLTAKGWTSQEILAGW 116 Query: 73 -EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + LY EPC MCA+AI A + + YG S Sbjct: 117 KDFSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148 >gi|51245439|ref|YP_065323.1| hypothetical protein DP1587 [Desulfotalea psychrophila LSv54] gi|50876476|emb|CAG36316.1| unknown protein [Desulfotalea psychrophila LSv54] Length = 200 Score = 40.8 bits (94), Expect = 0.066, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 11/81 (13%) Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC--------TMCAAAISLARIRRLYYGASNPKGG 108 LA+RM +IL+ + PEV+L+ P T + ++ R+ R GA P G Sbjct: 59 LAVRMKKKILNYDEHPEVELFFGANPVAFHTIGTLTQTRSGVTAGRMHR--KGAFTPANG 116 Query: 109 GIENGTQFYTLATCHHSPEIY 129 G+ G F ++ H PE Y Sbjct: 117 GL-GGRAFIRASSKHFKPEFY 136 >gi|58265894|ref|XP_570103.1| cytosine deaminase [Cryptococcus neoformans var. neoformans JEC21] gi|134110332|ref|XP_775993.1| hypothetical protein CNBD0430 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258661|gb|EAL21346.1| hypothetical protein CNBD0430 [Cryptococcus neoformans var. neoformans B-3501A] gi|56566313|gb|AAV98489.1| FCY1 [Cryptococcus neoformans var. neoformans] gi|57226336|gb|AAW42796.1| cytosine deaminase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 225 Score = 40.8 bits (94), Expect = 0.066, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 11/92 (11%) Query: 23 EIPVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL------SQEILP-- 72 + P G V +++++ N+ + H EI AI +L SQEIL Sbjct: 57 QAPFGTAIVNTTSDELVCVTSNKVGITGNPAMHGEISAITYCTEVLTAKGWTSQEILAGW 116 Query: 73 -EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + LY EPC MCA+AI A + + YG S Sbjct: 117 KDFSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148 >gi|289549140|ref|YP_003474128.1| riboflavin biosynthesis protein RibD [Thermocrinis albus DSM 14484] gi|289182757|gb|ADC90001.1| riboflavin biosynthesis protein RibD [Thermocrinis albus DSM 14484] Length = 353 Score = 40.8 bits (94), Expect = 0.067, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 29/131 (22%) Query: 26 VGAVAVLNNKIIS-----RAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 VG V V + KIIS RAG HAE++A+ + + + LYVTL Sbjct: 21 VGCVVVKDGKIISEGYHERAG---------APHAEVVALSK-----AGQNAKDSTLYVTL 66 Query: 81 EPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134 EPC+ C AI A ++R+ +P + +G + A ++ G+ E Sbjct: 67 EPCSHYGRTPPCTNAIIEAGVKRVVVATLDPNPKVMGSGIERLRAAGI----QVDVGVLE 122 Query: 135 QRSRQIIQDFF 145 + +RQ+ +DFF Sbjct: 123 EEARQLNEDFF 133 >gi|323488255|ref|ZP_08093505.1| riboflavin biosynthesis protein RibD [Planococcus donghaensis MPA1U2] gi|323398113|gb|EGA90909.1| riboflavin biosynthesis protein RibD [Planococcus donghaensis MPA1U2] Length = 367 Score = 40.8 bits (94), Expect = 0.067, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 23/155 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M + +M+ AL AQ + + P VG+V V +N+I+ LK HAEI Sbjct: 1 MSNHDFYMNLALTNAQTLKGQTD-PNPLVGSVIVNDNRIVGIG----THLKAGEPHAEIH 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 A+RM +SQ +YVTLEPC+ CA AI A I ++ +P Sbjct: 56 ALRMAGD-MSQG----ATIYVTLEPCSHFGRTGPCAQAIIDAGIEKVVIATLDPNPIVAG 110 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 NG + A E+ G+ E+ + ++ + F K Sbjct: 111 NGVRMLKEAGI----EVIVGVREEEAIKMNEVFNK 141 >gi|261855451|ref|YP_003262734.1| CMP/dCMP deaminase zinc-binding protein [Halothiobacillus neapolitanus c2] gi|261835920|gb|ACX95687.1| CMP/dCMP deaminase zinc-binding protein [Halothiobacillus neapolitanus c2] Length = 178 Score = 40.8 bits (94), Expect = 0.067, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 13/110 (11%) Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-- 106 D HAE R+ S E L + LY +EPC MCA A I R+ + + + Sbjct: 60 DTVNHAESTLARVAATNYSPEFLWQCTLYTAVEPCCMCAGTAYWANIGRVVFAMTEEQLL 119 Query: 107 ---GGGIENGT----QFYTLATCHHSPEIYPGISE---QRSRQIIQDFFK 146 G EN T Y A P + G E + +RQ+ +DF++ Sbjct: 120 AETGNHHENPTMSVSSHYVYAHG-QKPVVLIGPVEELIEETRQVHRDFWR 168 >gi|321262599|ref|XP_003196018.1| cytosine deaminase [Cryptococcus gattii WM276] gi|317462493|gb|ADV24231.1| cytosine deaminase, putative [Cryptococcus gattii WM276] Length = 252 Score = 40.8 bits (94), Expect = 0.068, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 11/92 (11%) Query: 23 EIPVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS------QEILP-- 72 + P G V +++++ N+ + H EI AI +L+ QEIL Sbjct: 57 QAPFGTAIVNTTSDELVCVTSNKVGVTGNPAMHGEISAITHCTEVLTGQGWTPQEILAGW 116 Query: 73 -EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 ++ LY EPC MCA+AI A + + YG S Sbjct: 117 KDLSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148 >gi|319651135|ref|ZP_08005268.1| riboflavin specific deaminase [Bacillus sp. 2_A_57_CT2] gi|317397189|gb|EFV77894.1| riboflavin specific deaminase [Bacillus sp. 2_A_57_CT2] Length = 365 Score = 40.8 bits (94), Expect = 0.068, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 19/96 (19%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V N +I+ + LK T HAE+ AI D+YVTLEPC+ Sbjct: 27 VGAVVVKNGEILGMGAH----LKAGTPHAEVHAIAAAGEKAKG-----ADIYVTLEPCSH 77 Query: 86 ------CAAAISLARIRRLYYGASNP----KGGGIE 111 CA I + I R++ +++P G GIE Sbjct: 78 FGRTPPCADLIINSGINRVFIASADPNPLVSGKGIE 113 >gi|170037228|ref|XP_001846461.1| cytidine and deoxycytidylate deaminase zinc-binding region [Culex quinquefasciatus] gi|167880295|gb|EDS43678.1| cytidine and deoxycytidylate deaminase zinc-binding region [Culex quinquefasciatus] Length = 377 Score = 40.8 bits (94), Expect = 0.068, Method: Compositional matrix adjust. Identities = 14/33 (42%), Positives = 24/33 (72%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 D+Y+T EPC MCA A++ +R+RR+++ +G Sbjct: 321 DVYLTHEPCIMCAMALTHSRVRRVFFHRKTSRG 353 >gi|29653981|ref|NP_819673.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Coxiella burnetii RSA 493] gi|29541244|gb|AAO90187.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Coxiella burnetii RSA 493] Length = 354 Score = 40.8 bits (94), Expect = 0.068, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 21/97 (21%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-MGCRILSQEILPEVDLYVTLEPCT 84 VGAV V ++KIIS ++ L HAE+ AI+ +G + LYVTLEPC Sbjct: 29 VGAVVVKDDKIISTGFHKRSGL----PHAEVEAIKSLGDKARGAA------LYVTLEPCC 78 Query: 85 M------CAAAISLARIRRLYYGASNPK----GGGIE 111 C I + I+ +YYG +P G GIE Sbjct: 79 HFGKTPPCTDLIIQSGIKAVYYGLHDPNLAVCGKGIE 115 >gi|153209016|ref|ZP_01947210.1| riboflavin biosynthesis protein RibD [Coxiella burnetii 'MSU Goat Q177'] gi|165920291|ref|ZP_02219563.1| riboflavin biosynthesis protein RibD [Coxiella burnetii RSA 334] gi|212219122|ref|YP_002305909.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Coxiella burnetii CbuK_Q154] gi|120575553|gb|EAX32177.1| riboflavin biosynthesis protein RibD [Coxiella burnetii 'MSU Goat Q177'] gi|165916847|gb|EDR35451.1| riboflavin biosynthesis protein RibD [Coxiella burnetii RSA 334] gi|212013384|gb|ACJ20764.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Coxiella burnetii CbuK_Q154] Length = 354 Score = 40.8 bits (94), Expect = 0.069, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 21/97 (21%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-MGCRILSQEILPEVDLYVTLEPCT 84 VGAV V ++KIIS ++ L HAE+ AI+ +G + LYVTLEPC Sbjct: 29 VGAVVVKDDKIISTGFHKRSGL----PHAEVEAIKSLGDKARGAA------LYVTLEPCC 78 Query: 85 M------CAAAISLARIRRLYYGASNPK----GGGIE 111 C I + I+ +YYG +P G GIE Sbjct: 79 HFGKTPPCTDLIIQSGIKAVYYGLHDPNLAVCGKGIE 115 >gi|260464042|ref|ZP_05812237.1| CMP/dCMP deaminase zinc-binding [Mesorhizobium opportunistum WSM2075] gi|259030213|gb|EEW31494.1| CMP/dCMP deaminase zinc-binding [Mesorhizobium opportunistum WSM2075] Length = 156 Score = 40.8 bits (94), Expect = 0.069, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 45/109 (41%), Gaps = 8/109 (7%) Query: 1 MKKGNVF--MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57 M + +F + A + A++AA P G V V +++I+ GN + HAE Sbjct: 1 MTRDRMFAHLRAANDVARDAAAHGHHPFGCVLVGPDDRILMGQGNIS-----TVRHAETK 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 R E L L T EPC MC + A I RL YG K Sbjct: 56 LARRAADAYPPEFLWSCTLVSTGEPCAMCTGTLYWANIGRLVYGFEETK 104 >gi|159464651|ref|XP_001690555.1| hypothetical protein CHLREDRAFT_144229 [Chlamydomonas reinhardtii] gi|158280055|gb|EDP05814.1| predicted protein [Chlamydomonas reinhardtii] Length = 420 Score = 40.8 bits (94), Expect = 0.070, Method: Compositional matrix adjust. Identities = 15/55 (27%), Positives = 33/55 (60%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 D+++ EPC MCA + +R++R+ Y S+P+ G + + + + +H+ E++ Sbjct: 347 DIFLVREPCIMCAMGLVHSRVQRVIYCQSDPQHGALGGRQRLHACKSLNHNYEVF 401 >gi|268572593|ref|XP_002641361.1| Hypothetical protein CBG13218 [Caenorhabditis briggsae] Length = 294 Score = 40.8 bits (94), Expect = 0.070, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 31/53 (58%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 D+++ EPC MC+ A+ RI+RL+Y S+ G ++G Q + + +H E Sbjct: 212 DVFLLNEPCAMCSMALVHFRIKRLFYVISSRNGVLKDDGWQLHLEPSINHHYE 264 >gi|328886795|emb|CCA60034.1| cytidine or deoxycytidine deaminase [Streptomyces venezuelae ATCC 10712] Length = 145 Score = 40.4 bits (93), Expect = 0.072, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 8/102 (7%) Query: 15 AQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73 A A + P G++ A + +++ A N R D+TAH E+ R R L+ E Sbjct: 17 AARAVTLGDAPYGSLLAGPDGTVLAEAHNTVRRDNDITAHPELKLARWAARELAPETAAG 76 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGAS-------NPKGG 108 LY + +PC MC I + I R+ Y S NP G Sbjct: 77 TTLYTSCQPCGMCGGGIIRSGIGRVVYALSTEQLVELNPPSG 118 >gi|302671281|ref|YP_003831241.1| CMP/dCMP deaminase zinc-binding domain-containing protein [Butyrivibrio proteoclasticus B316] gi|302395754|gb|ADL34659.1| CMP/dCMP deaminase zinc-binding domain-containing protein [Butyrivibrio proteoclasticus B316] Length = 172 Score = 40.4 bits (93), Expect = 0.072, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 43/97 (44%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M E A +A + GAV V + KI+ A N K + HAE + Sbjct: 8 YMKRCYELAISAGKKGFDTFGAVLVCDGKILEEAENTADFEKKIFGHAEFNLVHKCANKY 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + +IL + +Y + PC C AAI+ + ++ G S Sbjct: 68 TDDILEKSVVYTSCAPCERCLAAIASLGVHKVVCGVS 104 >gi|327399584|ref|YP_004340453.1| riboflavin biosynthesis protein RibD [Hippea maritima DSM 10411] gi|327182213|gb|AEA34394.1| riboflavin biosynthesis protein RibD [Hippea maritima DSM 10411] Length = 375 Score = 40.4 bits (93), Expect = 0.073, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 20/123 (16%) Query: 1 MKKGNVFMSCALE---EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M K +FM A+E +A+N N + VGAV V KII + ++ L HAE+ Sbjct: 13 MNKDELFMKKAIELAKKAKNKTCPNPL-VGAVIVKEGKIIGQGYHKKAGL----PHAEVE 67 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASN---PKGG 108 AI + + L + +YV LEPC C+ AI + I+R+ G + G Sbjct: 68 AIN---SVKDRNQLKDATIYVNLEPCNHYGRTPPCSLAIINSGIKRVVIGMRDINKKASG 124 Query: 109 GIE 111 GIE Sbjct: 125 GIE 127 >gi|271969361|ref|YP_003343557.1| guanine deaminase [Streptosporangium roseum DSM 43021] gi|270512536|gb|ACZ90814.1| guanine deaminase [Streptosporangium roseum DSM 43021] Length = 157 Score = 40.4 bits (93), Expect = 0.073, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%) Query: 24 IPVGAVAVLNNKIISRAG-NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 IP + V + +G NR R +D TAHAEI+A+R R L L + EP Sbjct: 30 IPFAGLVVDGTGTVLGSGVNRVRAHRDPTAHAEIVALREAAREHGPHALAGTTLLASGEP 89 Query: 83 CTMCAAAISLARIRRLYY 100 C +C + + R+ + Sbjct: 90 CPLCYVTALWSGVSRIVF 107 >gi|269856949|gb|ACZ51498.1| FCY1p [Cryptococcus heveanensis] Length = 231 Score = 40.4 bits (93), Expect = 0.074, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 11/92 (11%) Query: 23 EIPVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS------QEILP-- 72 + P G+ V ++++I N+ + H EI AI +L+ QEIL Sbjct: 60 QAPFGSAIVNTTSDELICVTSNKVGVTGNPAMHGEISAITHCTDVLTKKGLSPQEILASW 119 Query: 73 -EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + LY EPC MCA+AI A + + YG S Sbjct: 120 KDFSLYTNGEPCPMCASAIRWAGFKEVIYGTS 151 >gi|332524984|ref|ZP_08401168.1| cmp/dcmp deaminase zinc-binding protein [Rubrivivax benzoatilyticus JA2] gi|332108277|gb|EGJ09501.1| cmp/dcmp deaminase zinc-binding protein [Rubrivivax benzoatilyticus JA2] Length = 161 Score = 40.4 bits (93), Expect = 0.075, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 14/103 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILA 58 +++ N + AL E ++ P GAV V + ++ GN + HAE + Sbjct: 13 LRRANEVAARALAEGRH-------PFGAVLVGPDGDTVLLEQGNVS-----AVEHAEAVL 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 R R + E L L T+EPC MCA A I RL YG Sbjct: 61 AREAARRWAPEFLAGCTLVTTVEPCAMCAGTQYWAGIGRLVYG 103 >gi|152981769|ref|YP_001352932.1| cytosine/adenosine deaminase [Janthinobacterium sp. Marseille] gi|151281846|gb|ABR90256.1| cytosine/adenosine deaminase [Janthinobacterium sp. Marseille] Length = 169 Score = 40.4 bits (93), Expect = 0.075, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 2/91 (2%) Query: 15 AQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILP 72 ++ + R P A VA + +I AGN + + D T HAE+LA + LS E L Sbjct: 27 SEESKQRGRHPFAALVADEHGNVIVTAGNNSMPPEGDPTQHAELLAAARAAQKLSPEQLA 86 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + LY + EPC MC+ AI I R+ Y S Sbjct: 87 KSTLYTSAEPCCMCSGAIYWTGIGRVVYALS 117 >gi|83754218|pdb|2B3Z|A Chain A, Crystal Structure Of A Bifunctional Deaminase And Reductase Involved In Riboflavin Biosynthesis gi|83754219|pdb|2B3Z|B Chain B, Crystal Structure Of A Bifunctional Deaminase And Reductase Involved In Riboflavin Biosynthesis gi|83754220|pdb|2B3Z|C Chain C, Crystal Structure Of A Bifunctional Deaminase And Reductase Involved In Riboflavin Biosynthesis gi|83754221|pdb|2B3Z|D Chain D, Crystal Structure Of A Bifunctional Deaminase And Reductase Involved In Riboflavin Biosynthesis gi|83754933|pdb|2D5N|A Chain A, Crystal Structure Of A Bifunctional Deaminase And Reductase Involved In Riboflavin Biosynthesis gi|83754934|pdb|2D5N|B Chain B, Crystal Structure Of A Bifunctional Deaminase And Reductase Involved In Riboflavin Biosynthesis gi|83754935|pdb|2D5N|C Chain C, Crystal Structure Of A Bifunctional Deaminase And Reductase Involved In Riboflavin Biosynthesis gi|83754936|pdb|2D5N|D Chain D, Crystal Structure Of A Bifunctional Deaminase And Reductase Involved In Riboflavin Biosynthesis gi|211939446|pdb|3EX8|A Chain A, Complex Structure Of Bacillus Subtilis Ribg Reduction Mechanism In Riboflavin Biosynthesis gi|211939447|pdb|3EX8|B Chain B, Complex Structure Of Bacillus Subtilis Ribg Reduction Mechanism In Riboflavin Biosynthesis gi|211939448|pdb|3EX8|C Chain C, Complex Structure Of Bacillus Subtilis Ribg Reduction Mechanism In Riboflavin Biosynthesis gi|211939449|pdb|3EX8|D Chain D, Complex Structure Of Bacillus Subtilis Ribg Reduction Mechanism In Riboflavin Biosynthesis Length = 373 Score = 40.4 bits (93), Expect = 0.075, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 17/107 (15%) Query: 7 FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL+ A+ + E VGAV V + +I+ + LK AHAE+ AI M Sbjct: 17 YMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAH----LKYGEAHAEVHAIHMAGA 72 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 D+YVTLEPC+ CA I + I+R++ +P Sbjct: 73 HAEG-----ADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDP 114 >gi|260665250|ref|ZP_05866099.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii SJ-7A-US] gi|313472797|ref|ZP_07813285.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 1153] gi|260560987|gb|EEX26962.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii SJ-7A-US] gi|313448878|gb|EEQ68026.2| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 1153] Length = 352 Score = 40.4 bits (93), Expect = 0.076, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 22/124 (17%) Query: 1 MKKGNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MK FM AL EA N + VGAV V +N++++ G +R + ++ Sbjct: 2 MKTDEDFMGLALTEASKGRYHTWTNPM-VGAVVVKDNQVLA-TGYHHR-------YGDVH 52 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----G 107 A R L+ E L LYVTLEPC C+ I ++I+R+ +P G Sbjct: 53 AERDAISKLTPEQLFNSTLYVTLEPCNHTGKQPPCSDLIIASKIKRVVISEIDPHSLVTG 112 Query: 108 GGIE 111 GI+ Sbjct: 113 KGIK 116 >gi|238855788|ref|ZP_04646080.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 269-3] gi|282934748|ref|ZP_06339990.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 208-1] gi|238831564|gb|EEQ23909.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 269-3] gi|281301189|gb|EFA93491.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 208-1] Length = 359 Score = 40.4 bits (93), Expect = 0.077, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 22/124 (17%) Query: 1 MKKGNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MK FM AL EA N + VGAV V +N++++ G +R + ++ Sbjct: 9 MKTDEDFMGLALTEASKGRYHTWTNPM-VGAVVVKDNQVLA-TGYHHR-------YGDVH 59 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----G 107 A R L+ E L LYVTLEPC C+ I ++I+R+ +P G Sbjct: 60 AERDAISKLTPEQLFNSTLYVTLEPCNHTGKQPPCSDLIIASKIKRVVISEIDPHSLVTG 119 Query: 108 GGIE 111 GI+ Sbjct: 120 KGIK 123 >gi|91216505|ref|ZP_01253471.1| riboflavin biosynthesis protein ribD [Psychroflexus torquis ATCC 700755] gi|91185299|gb|EAS71676.1| riboflavin biosynthesis protein ribD [Psychroflexus torquis ATCC 700755] Length = 347 Score = 40.4 bits (93), Expect = 0.077, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 17/114 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MK ++ LE A N L P VG V V N++II + +K HAE+ Sbjct: 1 MKTNEFYIKRCLELAANG-LGTTYPNPLVGCVIVYNDRIIGEGWH----IKAGDDHAEVR 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 AI + Q +L + LYVTLEPC+ C+ I +I ++ G +P Sbjct: 56 AIN---SVKDQSLLKKSILYVTLEPCSHYGKTPPCSDLIIEKKIPKIVIGTLDP 106 >gi|295399034|ref|ZP_06809016.1| riboflavin biosynthesis protein RibD [Geobacillus thermoglucosidasius C56-YS93] gi|312110361|ref|YP_003988677.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y4.1MC1] gi|294978500|gb|EFG54096.1| riboflavin biosynthesis protein RibD [Geobacillus thermoglucosidasius C56-YS93] gi|311215462|gb|ADP74066.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y4.1MC1] Length = 361 Score = 40.4 bits (93), Expect = 0.077, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 23/124 (18%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M+ +M A+E A+ A + P VGAV V + +I+ + LK HAE+ Sbjct: 1 MRNDEQYMRLAIEMAK-AGIGQTSPNPIVGAVVVNSGEIVGFGAH----LKAGEPHAEVH 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----G 107 AIRM + E +YVTLEPC+ CA + A +RR+ ++P G Sbjct: 56 AIRM-----AGEKAKGATVYVTLEPCSHYGKTPPCADLLIDAGVRRVVIATTDPNPLVAG 110 Query: 108 GGIE 111 GIE Sbjct: 111 KGIE 114 >gi|228934673|ref|ZP_04097506.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228824925|gb|EEM70724.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 360 Score = 40.4 bits (93), Expect = 0.077, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 25/149 (16%) Query: 8 MSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M ALE A+ A++ + VG+V V +N+I+ + +K HAEI AIRM Sbjct: 1 MKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGIGAH----MKAGEPHAEIHAIRM-- 52 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + E +YVTLEPC+ CA AI A I+++ +P G + Sbjct: 53 ---AGEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKIL 109 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ G+ E++S+++ + F K Sbjct: 110 QDAGI----EVLVGVCEEKSKKMNEVFNK 134 >gi|284043910|ref|YP_003394250.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM 14684] gi|283948131|gb|ADB50875.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM 14684] Length = 195 Score = 40.4 bits (93), Expect = 0.079, Method: Compositional matrix adjust. Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 17/139 (12%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD---VTAHAEILAI 59 G V++SC L A A VGAV V + +++ A RNR L+ HAE A+ Sbjct: 34 DGFVWLSCTL--ALEAMEAGNYGVGAVLVRDGEVV--AEGRNRLLEPYVRTDCHAETEAV 89 Query: 60 -RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + R L+ +LE C MC + IR +YY A + GG Sbjct: 90 DQFEARFRDFPDATGTVLWTSLECCPMCTVRLINTGIREVYYAAPDADGG---------M 140 Query: 119 LATCHHSPEIYPGISEQRS 137 L+ P + G++ +R Sbjct: 141 LSRWDGLPPFWRGLAARRD 159 >gi|221058419|ref|XP_002259855.1| cytidine and deoxycytidylate deaminase family [Plasmodium knowlesi strain H] gi|193809928|emb|CAQ41122.1| cytidine and deoxycytidylate deaminase family,putative [Plasmodium knowlesi strain H] Length = 245 Score = 40.4 bits (93), Expect = 0.080, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 37/78 (47%) Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 E L + + VT EPC MC A+ L IR +Y+ N + GG + + + I Sbjct: 152 ENLRKCCIVVTCEPCIMCVYALKLMGIRNIYFCCLNERFGGCGSVLSLHKTYQDINVNYI 211 Query: 129 YPGISEQRSRQIIQDFFK 146 G +RS ++Q F+K Sbjct: 212 KSGGCTERSISLMQSFYK 229 >gi|317056285|ref|YP_004104752.1| riboflavin biosynthesis protein RibD [Ruminococcus albus 7] gi|315448554|gb|ADU22118.1| riboflavin biosynthesis protein RibD [Ruminococcus albus 7] Length = 369 Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 26/132 (19%) Query: 26 VGAVAVLNNKIIS-----RAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 VGAV V + II+ R G+ + E +A AE A + CR D+YVTL Sbjct: 27 VGAVIVRDGNIIASGYHKRYGDLHAER---SAFAECDAKDIDCR--------GADMYVTL 75 Query: 81 EPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134 EPC C A+ I+R++ G+S+P GT H E+ G+ + Sbjct: 76 EPCCHHGKQPPCTDAVIEHGIKRVFVGSSDPNPLVAGKGTAILR----EHGIEVTEGVLK 131 Query: 135 QRSRQIIQDFFK 146 ++ + FFK Sbjct: 132 DECDRLNEIFFK 143 >gi|297569249|ref|YP_003690593.1| riboflavin biosynthesis protein RibD [Desulfurivibrio alkaliphilus AHT2] gi|296925164|gb|ADH85974.1| riboflavin biosynthesis protein RibD [Desulfurivibrio alkaliphilus AHT2] Length = 368 Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 19/108 (17%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ALE A+ + P VGAV V + +++ R +R + HAEI Sbjct: 9 YMKMALELARKGVGKTS-PNPCVGAVLVKDGQVVGRGWHR----RAGEPHAEI-----NA 58 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + ++ +YVTLEPC C+ AI A IRR+ YG S+P Sbjct: 59 LAAAGDLAGGATIYVTLEPCNHQGRTPPCSKAIEAAGIRRVVYGMSDP 106 >gi|321311800|ref|YP_004204087.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus subtilis BSn5] gi|320018074|gb|ADV93060.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus subtilis BSn5] Length = 361 Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 17/107 (15%) Query: 7 FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL+ A+ + E VGAV V + +I+ + LK AHAE+ AI M Sbjct: 5 YMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAH----LKYGEAHAEVHAIHMAGA 60 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 D+YVTLEPC+ CA I + I+R++ +P Sbjct: 61 HAEG-----ADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDP 102 >gi|50365203|ref|YP_053628.1| deoxycytidylate deaminase [Mesoplasma florum L1] gi|50363759|gb|AAT75744.1| deoxycytidylate deaminase [Mesoplasma florum L1] Length = 157 Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 27/108 (25%) Query: 15 AQNAALRNEIP---VGAVAVLN-NKIISRAGN--------------RNRELKDV----TA 52 A+ A+R++ P VGA+ V N N+IIS N R E D A Sbjct: 17 AKVCAMRSKDPSTQVGAILVNNLNQIISTGYNGFPRGVNDDEFPWTREGEWIDTKYPYVA 76 Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + ++ L + D+YVTL PC C I A I+++YY Sbjct: 77 HAELNAI-----VSARTNLTDSDVYVTLFPCNECTKIIIQAGIKKVYY 119 >gi|149372326|ref|ZP_01891514.1| riboflavin biosynthesis protein ribD [unidentified eubacterium SCB49] gi|149354716|gb|EDM43279.1| riboflavin biosynthesis protein ribD [unidentified eubacterium SCB49] Length = 340 Score = 40.4 bits (93), Expect = 0.083, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 13/86 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V+++KII + L+ HAE+ AI + +++L + +YV+LEPC+ Sbjct: 21 VGSVIVVDDKIIGEGWH----LEAGKPHAEVNAIN---SVTDEKLLEKATIYVSLEPCSH 73 Query: 86 ------CAAAISLARIRRLYYGASNP 105 CA I I+ + G+++P Sbjct: 74 FGKTPPCADLIVTKGIKNIVIGSTDP 99 >gi|254491989|ref|ZP_05105167.1| riboflavin biosynthesis protein RibD [Methylophaga thiooxidans DMS010] gi|224462804|gb|EEF79075.1| riboflavin biosynthesis protein RibD [Methylophaga thiooxydans DMS010] Length = 368 Score = 40.4 bits (93), Expect = 0.083, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 25/137 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V N++II + ++ HAE+ AI+ D YVTLEPC+ Sbjct: 28 VGCVIVKNDEIIGEGWH----MRAGEGHAEVNAIQAAGHAAEG-----ADCYVTLEPCSH 78 Query: 86 ------CAAAISLARIRRLYYGASNP----KGGGI----ENGTQFYTLATCHHSPEIYPG 131 C A+ A+++R++ ++P G GI + G + +T S ++ PG Sbjct: 79 FGRTPPCVDALITAKVKRVFVAMTDPNPVVSGSGITRLRQAGVEVHTDILAAQSEKLNPG 138 Query: 132 ISEQRSRQIIQDFFKER 148 QR R I + F + + Sbjct: 139 FC-QRMR-IGKPFIRSK 153 >gi|82751356|ref|YP_417097.1| riboflavin specific deaminase [Staphylococcus aureus RF122] gi|82656887|emb|CAI81317.1| riboflavin specific deaminase [Staphylococcus aureus RF122] Length = 347 Score = 40.4 bits (93), Expect = 0.083, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ A + + PVGAV V +I+ + L+ HAE+ A+ M Sbjct: 4 FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 56 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +Q+ +Y+TLEPC+ C I +I ++ Y +N + Sbjct: 57 --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHG 107 Query: 119 LATC-HHSPEIYPGISEQRSRQIIQDFFKER 148 T H E+ + ++R+ Q+ QDFFK + Sbjct: 108 DDTLRDHGIEV-ECVDDERASQLYQDFFKAK 137 >gi|16079385|ref|NP_390209.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus subtilis subsp. subtilis str. 168] gi|221310245|ref|ZP_03592092.1| riboflavin-specific deaminase [Bacillus subtilis subsp. subtilis str. 168] gi|221314569|ref|ZP_03596374.1| riboflavin-specific deaminase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319491|ref|ZP_03600785.1| riboflavin-specific deaminase [Bacillus subtilis subsp. subtilis str. JH642] gi|221323767|ref|ZP_03605061.1| riboflavin-specific deaminase [Bacillus subtilis subsp. subtilis str. SMY] gi|132565|sp|P17618|RIBD_BACSU RecName: Full=Riboflavin biosynthesis protein RibD; Includes: RecName: Full=Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase; Includes: RecName: Full=5-amino-6-(5-phosphoribosylamino)uracil reductase; AltName: Full=HTP reductase gi|40085|emb|CAA35878.1| unnamed protein product [Bacillus subtilis] gi|410125|gb|AAA67481.1| ribG [Bacillus subtilis subsp. subtilis str. 168] gi|2634763|emb|CAB14260.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus subtilis subsp. subtilis str. 168] gi|34873545|gb|AAQ83285.1| RibG [Cloning vector pRFN4] Length = 361 Score = 40.4 bits (93), Expect = 0.083, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 17/107 (15%) Query: 7 FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL+ A+ + E VGAV V + +I+ + LK AHAE+ AI M Sbjct: 5 YMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAH----LKYGEAHAEVHAIHMAGA 60 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 D+YVTLEPC+ CA I + I+R++ +P Sbjct: 61 HAEG-----ADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDP 102 >gi|291484757|dbj|BAI85832.1| riboflavin-specific deaminase [Bacillus subtilis subsp. natto BEST195] Length = 361 Score = 40.4 bits (93), Expect = 0.085, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 17/107 (15%) Query: 7 FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL+ A+ + E VGAV V + +I+ + LK AHAE+ AI M Sbjct: 5 YMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAH----LKYGEAHAEVHAIHMAGA 60 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 D+YVTLEPC+ CA I + I+R++ +P Sbjct: 61 HAEG-----ADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDP 102 >gi|326315894|ref|YP_004233566.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372730|gb|ADX44999.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 177 Score = 40.4 bits (93), Expect = 0.086, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 7/80 (8%) Query: 25 PVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 P GA VA + +++ GN D HAE R ++L L T EP Sbjct: 46 PFGALLVAPDGDTVLAEQGN-----IDTVNHAESTLAREAAARWPADLLRGCTLVTTFEP 100 Query: 83 CTMCAAAISLARIRRLYYGA 102 C MCA I A I R+ YGA Sbjct: 101 CAMCAGTIYWAGIGRVLYGA 120 >gi|229128665|ref|ZP_04257643.1| Riboflavin biosynthesis protein [Bacillus cereus BDRD-Cer4] gi|228654858|gb|EEL10718.1| Riboflavin biosynthesis protein [Bacillus cereus BDRD-Cer4] Length = 348 Score = 40.4 bits (93), Expect = 0.086, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 19/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +N+I+ + +K HAEI AIRM + E + +YVTLEPC+ Sbjct: 11 VGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-----AGEQVRGATIYVTLEPCSH 61 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA AI A I+++ +P G + A E+ G+ E+ S++ Sbjct: 62 HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGI----EVLVGVCEEESKK 117 Query: 140 IIQDFFK 146 + + F K Sbjct: 118 MNEVFNK 124 >gi|56566242|gb|AAV98449.1| FCY1 [Cryptococcus neoformans var. grubii] Length = 225 Score = 40.4 bits (93), Expect = 0.086, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 9/60 (15%) Query: 53 HAEILAIRMGCRIL------SQEILP---EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 H EI AI +L SQEIL + LY EPC MCA+AI A + + YG S Sbjct: 89 HGEISAITHCTEVLTAQGWTSQEILAGWKDFSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148 >gi|85000845|ref|XP_955141.1| deaminase [Theileria annulata strain Ankara] gi|65303287|emb|CAI75665.1| deaminase, putative [Theileria annulata] Length = 297 Score = 40.4 bits (93), Expect = 0.086, Method: Compositional matrix adjust. Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 16/119 (13%) Query: 29 VAVLNNKIISRAGNRNRELKDVTAHAEILAI------RMGCRILSQEILPEV-----DLY 77 + +K+IS A ++ R++ ++ HA ILA+ + + P+ D+Y Sbjct: 181 IITFKDKVISTAFDK-RDV-NILKHASILAVGKIAEAKKKRETQKMKDFPDYLCTGCDVY 238 Query: 78 VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH---SPEIYPGIS 133 ++ EPC MC A+ +RI ++ YG N K G + + + +H + + P IS Sbjct: 239 LSHEPCCMCGMALLHSRISKVIYGIKNQKLGCFGSVWNLHNMIELNHHFRAFTVTPNIS 297 >gi|15605717|ref|NP_213094.1| riboflavin specific deaminase [Aquifex aeolicus VF5] gi|6225948|sp|O66534|RIBD_AQUAE RecName: Full=Riboflavin biosynthesis protein RibD; Includes: RecName: Full=Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase; Includes: RecName: Full=5-amino-6-(5-phosphoribosylamino)uracil reductase; AltName: Full=HTP reductase gi|2982867|gb|AAC06487.1| riboflavin specific deaminase [Aquifex aeolicus VF5] Length = 356 Score = 40.4 bits (93), Expect = 0.086, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 27/130 (20%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V KI+ + K HAE++A+ + E LYVTLEPCT Sbjct: 30 VGAVVVKEGKIVGLGYHE----KAGKPHAEVMALGQ-----AGEKAKGATLYVTLEPCTH 80 Query: 86 ------CAAAISLARIRRLYYGASNP----KGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 C AI + I+R+ +P G G+E + E+ G+ E+ Sbjct: 81 FGRTPPCTDAIIRSGIKRVVVATLDPNPLMSGKGVEK--------LRNAGIEVDVGVCEE 132 Query: 136 RSRQIIQDFF 145 +R++ +DFF Sbjct: 133 EARELNEDFF 142 >gi|317053384|ref|YP_004119151.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pantoea sp. At-9b] gi|316953123|gb|ADU72595.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pantoea sp. At-9b] Length = 144 Score = 40.4 bits (93), Expect = 0.087, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 21/115 (18%) Query: 1 MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K FM ALE ++ A R PVG V V N ++S+ ++ HAEI A Sbjct: 1 MSKELDFMLLALEYSRLALPECRPNPPVGCVIVHNGVVVSKGFTQSPG----HHHAEIDA 56 Query: 59 IRMGCRILSQEILP--EVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 I S+ P E D++VTLEPC+ CA ++ + R +Y +P Sbjct: 57 I-------SRLTFPMGECDIFVTLEPCSYQGRTPSCARTLAEMKPRHIYIAIEDP 104 >gi|121595392|ref|YP_987288.1| CMP/dCMP deaminase [Acidovorax sp. JS42] gi|120607472|gb|ABM43212.1| CMP/dCMP deaminase, zinc-binding protein [Acidovorax sp. JS42] Length = 170 Score = 40.4 bits (93), Expect = 0.088, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 41/105 (39%), Gaps = 8/105 (7%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74 AQ A P GAV V ++ N D HAE R+ + E L Sbjct: 29 AQRAVSLGHHPFGAVLVGPDQETVLLEQCN---IDTVNHAESTLARVAATNFTPEFLWGC 85 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPK-----GGGIENGT 114 LY +EPC MCA A I R+ YG + + G EN T Sbjct: 86 TLYTAVEPCCMCAGTAYWANIGRVVYGMTEAQLLAETGSHAENPT 130 >gi|49484015|ref|YP_041239.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257425881|ref|ZP_05602305.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus 55/2053] gi|257428548|ref|ZP_05604946.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus 65-1322] gi|257431182|ref|ZP_05607559.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus 68-397] gi|257433863|ref|ZP_05610221.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus E1410] gi|257436780|ref|ZP_05612824.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus M876] gi|282904343|ref|ZP_06312231.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus C160] gi|282906168|ref|ZP_06314023.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus Btn1260] gi|282909085|ref|ZP_06316903.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911393|ref|ZP_06319195.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus WBG10049] gi|282914562|ref|ZP_06322348.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus M899] gi|282919530|ref|ZP_06327265.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus C427] gi|282924908|ref|ZP_06332574.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus C101] gi|283958523|ref|ZP_06375974.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus A017934/97] gi|293503640|ref|ZP_06667487.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus 58-424] gi|293510656|ref|ZP_06669361.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus M809] gi|293537197|ref|ZP_06671877.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus M1015] gi|295428344|ref|ZP_06820973.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590692|ref|ZP_06949330.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus MN8] gi|49242144|emb|CAG40844.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257271575|gb|EEV03721.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus 55/2053] gi|257275389|gb|EEV06876.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus 65-1322] gi|257278130|gb|EEV08778.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus 68-397] gi|257281956|gb|EEV12093.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus E1410] gi|257284131|gb|EEV14254.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus M876] gi|282313274|gb|EFB43670.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus C101] gi|282317340|gb|EFB47714.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus C427] gi|282321743|gb|EFB52068.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus M899] gi|282325088|gb|EFB55398.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus WBG10049] gi|282327349|gb|EFB57644.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331460|gb|EFB60974.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus Btn1260] gi|282595961|gb|EFC00925.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus C160] gi|283790672|gb|EFC29489.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus A017934/97] gi|290920042|gb|EFD97110.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus M1015] gi|291095306|gb|EFE25571.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus 58-424] gi|291466547|gb|EFF09068.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus M809] gi|295127744|gb|EFG57381.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575578|gb|EFH94294.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus MN8] gi|312437774|gb|ADQ76845.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus TCH60] gi|315195682|gb|EFU26069.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus CGS00] Length = 347 Score = 40.4 bits (93), Expect = 0.088, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ A + + PVGAV V +I+ + L+ HAE+ A+ M Sbjct: 4 FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 56 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +Q+ +Y+TLEPC+ C I +I ++ Y +N + Sbjct: 57 --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHG 107 Query: 119 LATC-HHSPEIYPGISEQRSRQIIQDFFKER 148 T H E+ + ++R+ Q+ QDFFK + Sbjct: 108 DETIRDHGIEV-ECVDDERASQLYQDFFKAK 137 >gi|21283440|ref|NP_646528.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus MW2] gi|49486593|ref|YP_043814.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus MSSA476] gi|297207517|ref|ZP_06923953.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911601|ref|ZP_07129045.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus TCH70] gi|21204881|dbj|BAB95576.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus MW2] gi|49245036|emb|CAG43497.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus MSSA476] gi|296887853|gb|EFH26750.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887022|gb|EFK82223.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus TCH70] Length = 347 Score = 40.4 bits (93), Expect = 0.088, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ A + + PVGAV V +I+ + L+ HAE+ A+ M Sbjct: 4 FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 56 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +Q+ +Y+TLEPC+ C I +I ++ Y +N + Sbjct: 57 --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKITKVVYATK-------DNSLDTHG 107 Query: 119 LATCH-HSPEIYPGISEQRSRQIIQDFFKER 148 T H E+ + ++R+ Q+ QDFFK + Sbjct: 108 DETLRAHGIEV-ECVDDERASQLYQDFFKAK 137 >gi|146308130|ref|YP_001188595.1| CMP/dCMP deaminase, zinc-binding [Pseudomonas mendocina ymp] gi|145576331|gb|ABP85863.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina ymp] Length = 186 Score = 40.4 bits (93), Expect = 0.089, Method: Compositional matrix adjust. Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 5/42 (11%) Query: 72 PEVD-----LYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 P++D LYV+LEPC MC + I LA IRR+ Y A + GG Sbjct: 84 PQLDRSGLTLYVSLEPCLMCHSRILLAGIRRVRYLARDRDGG 125 >gi|283471035|emb|CAQ50246.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus ST398] Length = 347 Score = 40.4 bits (93), Expect = 0.091, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ A + + PVGAV V +I+ + L+ HAE+ A+ M Sbjct: 4 FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 56 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +Q+ +Y+TLEPC+ C I +I ++ Y +N + Sbjct: 57 --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHG 107 Query: 119 LATC-HHSPEIYPGISEQRSRQIIQDFFKER 148 T H E+ + ++R+ Q+ QDFFK + Sbjct: 108 DETLRDHGIEV-ECVDDERASQLYQDFFKAK 137 >gi|325953844|ref|YP_004237504.1| riboflavin biosynthesis protein RibD [Weeksella virosa DSM 16922] gi|323436462|gb|ADX66926.1| riboflavin biosynthesis protein RibD [Weeksella virosa DSM 16922] Length = 345 Score = 40.4 bits (93), Expect = 0.091, Method: Compositional matrix adjust. Identities = 46/148 (31%), Positives = 65/148 (43%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M+ L+ A N L N P VG+V V N II HAE+ AI Sbjct: 10 YMNRCLQLAANG-LGNTYPNPFVGSVIVHNQNIIGEGFTSFYG----GPHAEVNAIH--- 61 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + +E+LP LYVTLEPC C+ I +I R+ G +P + NG Sbjct: 62 SVEKKELLPSSTLYVTLEPCAHFGKTPPCSDLIIEHKIPRVVVGCLDP--FALVNGEGIN 119 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 + T H E+ GI E+ ++ + FF Sbjct: 120 RMRT--HGIEVSVGILEKECLELNRRFF 145 >gi|77918274|ref|YP_356089.1| cytosine/adenosine deaminase [Pelobacter carbinolicus DSM 2380] gi|77544357|gb|ABA87919.1| cytosine/adenosine deaminase [Pelobacter carbinolicus DSM 2380] Length = 193 Score = 40.4 bits (93), Expect = 0.091, Method: Compositional matrix adjust. Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 16/100 (16%) Query: 51 TAHAEILAIRMGCRILSQEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGA--SN 104 AHAE++A+ + + + L + +L + EPC MC A+ A +++L GA ++ Sbjct: 78 VAHAELVALMLAQKYVGSFSLADAGRNAELTSSTEPCAMCLGALPWAGLKQLACGARETD 137 Query: 105 PKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + G + G + P +PG+ E+R ++++D Sbjct: 138 ARAVGFDEGDK----------PPQWPGLLEKRGIRVLRDI 167 >gi|282933540|ref|ZP_06338910.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 208-1] gi|297205330|ref|ZP_06922726.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii JV-V16] gi|281302283|gb|EFA94515.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 208-1] gi|297149908|gb|EFH30205.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii JV-V16] Length = 351 Score = 40.4 bits (93), Expect = 0.092, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 22/159 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K FM+ A+ A VGAV V + K++ A + + DV HAE Sbjct: 1 MNKDEQFMALAINSASKGRYHTWTNPMVGAVVVKDGKVL--ATGYHHKYGDV--HAE--- 53 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 R L+ E L LYVTLEPC C+ I ++I+R+ +P G+ Sbjct: 54 -RDAISKLTPEQLFNSTLYVTLEPCNHTGKQPPCSDLIIASKIKRVVISEIDPH--GLVT 110 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ--DFFKERR 149 G L + H+ + G+ Q ++++ + +FF E + Sbjct: 111 GKGIKKLRS--HNISVTTGVLTQEAKKLNKHYNFFYEHK 147 >gi|110598673|ref|ZP_01386938.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM 13031] gi|110339726|gb|EAT58236.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM 13031] Length = 192 Score = 40.4 bits (93), Expect = 0.092, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 9/104 (8%) Query: 52 AHAEILAIRMGCRILSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--N 104 AHAE++AI + + ++ L P+ +L + EPC MC AI + I RL GAS + Sbjct: 79 AHAEMVAIAIAQKKINSWTLNHAKSPQHELVTSCEPCAMCFGAIIWSGISRLVCGASTAD 138 Query: 105 PKGGGIENG--TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + G + + E+ GI ++ + +D+ + Sbjct: 139 ATAAGFDEGPKPEKWIEELEKRGIEVVTGICSNDAKMVFRDYLE 182 >gi|312213591|emb|CBX93593.1| similar to tRNA-specific adenosine-34 deaminase subunit Tad3 [Leptosphaeria maculans] Length = 430 Score = 40.4 bits (93), Expect = 0.093, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 25/40 (62%) Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++D+Y+T EPC MC+ AI +R RR + P GG+ + Sbjct: 339 DLDIYLTNEPCVMCSMAILHSRFRRCVFSKRMPHTGGMTS 378 >gi|194367233|ref|YP_002029843.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia R551-3] gi|194350037|gb|ACF53160.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia R551-3] Length = 150 Score = 40.4 bits (93), Expect = 0.093, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 8/120 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A+ EA+ +P+GA N+ +++ NR + D + H E A R R Sbjct: 10 LLQTAIAEARQGLAEGGVPIGAALYHNDGRLLGCGHNRRVQESDPSVHGETDAFRKAGR- 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLAT 121 Q + + TL PC C+ + I + G S GGI ENG + L + Sbjct: 69 --QRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESRTFQGGIDWLRENGVKVIDLDS 126 >gi|282917028|ref|ZP_06324786.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus D139] gi|283770846|ref|ZP_06343738.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus H19] gi|282319515|gb|EFB49867.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus D139] gi|283460993|gb|EFC08083.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus H19] Length = 347 Score = 40.0 bits (92), Expect = 0.094, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ A + + PVGAV V +I+ + L+ HAE+ A+ M Sbjct: 4 FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 56 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +Q+ +Y+TLEPC+ C I +I ++ Y +N + Sbjct: 57 --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHG 107 Query: 119 LATC-HHSPEIYPGISEQRSRQIIQDFFKER 148 T H E+ + ++R+ Q+ QDFFK + Sbjct: 108 DETLRDHGIEV-ECVDDERASQLYQDFFKAK 137 >gi|256851712|ref|ZP_05557100.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 27-2-CHN] gi|260661570|ref|ZP_05862482.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 115-3-CHN] gi|256615670|gb|EEU20859.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 27-2-CHN] gi|260547627|gb|EEX23605.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 115-3-CHN] Length = 352 Score = 40.0 bits (92), Expect = 0.095, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 22/159 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K FM+ A+ A VGAV V + K++ A + + DV HAE Sbjct: 2 MNKDEQFMALAINSASKGRYHTWTNPMVGAVVVKDGKVL--ATGYHHKYGDV--HAE--- 54 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 R L+ E L LYVTLEPC C+ I ++I+R+ +P G+ Sbjct: 55 -RDAISKLTPEQLFNSTLYVTLEPCNHTGKQPPCSDLIIASKIKRVVISEIDPH--GLVT 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ--DFFKERR 149 G L + H+ + G+ Q ++++ + +FF E + Sbjct: 112 GKGIKKLRS--HNISVTTGVLTQEAKKLNKHYNFFYEHK 148 >gi|303272905|ref|XP_003055814.1| predicted protein [Micromonas pusilla CCMP1545] gi|226463788|gb|EEH61066.1| predicted protein [Micromonas pusilla CCMP1545] Length = 354 Score = 40.0 bits (92), Expect = 0.095, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA---TCHHSPEIY 129 D+Y EPC MCA A++ +R+RR+ Y + + G + G Y+L T +H ++Y Sbjct: 293 DVYCAREPCVMCAMALTHSRVRRVIYAIPSARHGALGGGA--YSLQKERTLNHHYDVY 348 >gi|51245792|ref|YP_065676.1| hypothetical protein DP1940 [Desulfotalea psychrophila LSv54] gi|50876829|emb|CAG36669.1| hypothetical protein DP1940 [Desulfotalea psychrophila LSv54] Length = 164 Score = 40.0 bits (92), Expect = 0.096, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 5/79 (6%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL-----PEVDLYVTLEPCTMCA 87 + +++ NR L +AHAE++AI + + L L PE +L V PC MC Sbjct: 29 SGRLVMLGVNRVMPLNCSSAHAEVMAISLAQQKLENFDLGAPGMPEHELVVNWRPCIMCL 88 Query: 88 AAISLARIRRLYYGASNPK 106 A+ + R L S P+ Sbjct: 89 GALMWSGARHLTIAGSGPE 107 >gi|320142810|gb|EFW34610.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus MRSA177] Length = 357 Score = 40.0 bits (92), Expect = 0.098, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ A + + PVGAV V +I+ + L+ HAE+ A+ M Sbjct: 14 FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 66 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +Q+ +Y+TLEPC+ C I +I ++ Y +N + Sbjct: 67 --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHG 117 Query: 119 LATCH-HSPEIYPGISEQRSRQIIQDFFKER 148 T H E+ + ++R+ Q+ QDFFK + Sbjct: 118 DETLRAHGIEV-ECVDDERASQLYQDFFKAK 147 >gi|313895132|ref|ZP_07828689.1| riboflavin biosynthesis protein RibD [Selenomonas sp. oral taxon 137 str. F0430] gi|312976027|gb|EFR41485.1| riboflavin biosynthesis protein RibD [Selenomonas sp. oral taxon 137 str. F0430] Length = 386 Score = 40.0 bits (92), Expect = 0.099, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 54/118 (45%), Gaps = 23/118 (19%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL A+ A R P VGAV V + ++ +R HAEI A+RM Sbjct: 28 FMWEALHLAEFARGRTS-PNPLVGAVIVRDGIVVGSGWHRAAG----EPHAEIHALRM-- 80 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111 + E+ LYVTLEPC+ CA A+ A I R+ S+P G GIE Sbjct: 81 ---AGELARGATLYVTLEPCSHHGRTGPCAEAVIAAGIARVVTALSDPNPVVAGHGIE 135 >gi|302333432|gb|ADL23625.1| bifunctional pyrimidine reductase / riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 343 Score = 40.0 bits (92), Expect = 0.099, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 34/136 (25%) Query: 25 PVGAVAVLNNKIIS-----RAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 PVGAV V +I+ R GN+ HAE+ A+ M +Q+ +Y+T Sbjct: 20 PVGAVVVKEGRIVGIGAHLRKGNK---------HAEVQALDM-----AQQNAEGATIYIT 65 Query: 80 LEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-HSPEIYPGI 132 LEPC+ C I +I ++ Y +N + T H E+ + Sbjct: 66 LEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHGDDTLRAHGIEV-ECV 117 Query: 133 SEQRSRQIIQDFFKER 148 ++R+ Q+ QDFFK + Sbjct: 118 DDERASQLYQDFFKAK 133 >gi|317128514|ref|YP_004094796.1| riboflavin biosynthesis protein RibD [Bacillus cellulosilyticus DSM 2522] gi|315473462|gb|ADU30065.1| riboflavin biosynthesis protein RibD [Bacillus cellulosilyticus DSM 2522] Length = 362 Score = 40.0 bits (92), Expect = 0.099, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 19/110 (17%) Query: 5 NVFMSCALEEA---QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N +M A+E A + N + VGAV V NN+I+ + LK HAE AI M Sbjct: 3 NKYMKMAIELAKVTEGHTTPNPV-VGAVIVNNNQIVGFGAH----LKAGEHHAEKHAIEM 57 Query: 62 GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 +++ +YVTLEPC+ CA A+ A I+++ G+ +P Sbjct: 58 -----AKDKTEGATIYVTLEPCSHYGRTPPCADAVIEAGIKKVIIGSVDP 102 >gi|229103925|ref|ZP_04234603.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-28] gi|228679493|gb|EEL33692.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-28] Length = 360 Score = 40.0 bits (92), Expect = 0.099, Method: Compositional matrix adjust. Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 23/148 (15%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M ALE A NA P VG+V V +N+I+ + +K HAEI AIRM Sbjct: 1 MKLALENA-NAMKGQTTPNPLVGSVIVNDNRIVGIGAH----MKAGEPHAEIHAIRM--- 52 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + E +YVTLEPC+ CA AI A I+++ +P + +G Sbjct: 53 --AGEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPN--PLVSGRGIKV 108 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146 L E+ G+ E+ S+++ + F K Sbjct: 109 LQDA--GIEVLVGVCEEESKKMNEVFNK 134 >gi|329947524|ref|ZP_08294716.1| guanine deaminase family protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328524214|gb|EGF51287.1| guanine deaminase family protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 160 Score = 40.0 bits (92), Expect = 0.099, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 24 IPVGAVAVLNNKIISRAG-NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 +P V V + IS G NR +E D +AHAEI+AIR + L L T EP Sbjct: 28 LPFVGVIVDGQQAISEFGVNRVQETGDPSAHAEIVAIRDALSSSGETDLRGTTLLATGEP 87 Query: 83 CTMC 86 C MC Sbjct: 88 CGMC 91 >gi|23097878|ref|NP_691344.1| riboflavin specific deaminase [Oceanobacillus iheyensis HTE831] gi|22776102|dbj|BAC12379.1| riboflavin specific deaminase (diaminohydroxyphosphoribosylaminopyrimidine deaminase : 5-amino-6-(5-phosphoribosylamino) uracil reductase) [Oceanobacillus iheyensis HTE831] Length = 367 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 25/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M +M A+E A+ A++ + VGAV V +N+I+ + LK HAEI Sbjct: 1 MTDDKHYMKLAIENAK--AMKGQTDPNPLVGAVIVNHNRIVGVGSH----LKAGEPHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 A++M + E +YVTLEPC+ CA A+ A +RR+ +P Sbjct: 55 HALQM-----AGENAKGATIYVTLEPCSHQGRTGPCALALVEAGVRRVVIATLDPNPLVA 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 NG + A E+ G+ E S + + F K Sbjct: 110 GNGVKILEDAGI----EVEVGVLEDESISMNEVFNK 141 >gi|258424182|ref|ZP_05687064.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9635] gi|257845803|gb|EEV69835.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9635] Length = 347 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ A + + PVGAV V +I+ + L+ HAE+ A+ M Sbjct: 4 FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 56 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +Q+ +Y+TLEPC+ C I +I ++ Y +N + Sbjct: 57 --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLNTHG 107 Query: 119 LATC-HHSPEIYPGISEQRSRQIIQDFFKER 148 T H E+ + ++R+ Q+ QDFFK + Sbjct: 108 DETLRDHGIEV-ECVDDERASQLYQDFFKAK 137 >gi|328873884|gb|EGG22250.1| hypothetical protein DFA_04368 [Dictyostelium fasciculatum] Length = 328 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 28/61 (45%) Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 N ++ AH E +AI + + LY T EPC MCA A+ A + + +G Sbjct: 101 NTGSPNMIAHGETVAINNCTALYGIKSFTNFTLYTTGEPCAMCAGALVWADFKTIVWGTF 160 Query: 104 N 104 N Sbjct: 161 N 161 >gi|308272413|emb|CBX29018.1| hypothetical protein N47_P17230 [uncultured Desulfobacterium sp.] Length = 196 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%) Query: 53 HAEILAI-----RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 HAE+LA ++ L LP +L + EPC MC AI+ + +RR+ GAS+ Sbjct: 82 HAEVLAFALAQKKVATYDLGGANLPSHELVSSTEPCAMCLGAIAWSGVRRVITGASD 138 >gi|320354782|ref|YP_004196121.1| CMP/dCMP deaminase zinc-binding protein [Desulfobulbus propionicus DSM 2032] gi|320123284|gb|ADW18830.1| CMP/dCMP deaminase zinc-binding protein [Desulfobulbus propionicus DSM 2032] Length = 197 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 5/79 (6%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRM-----GCRILSQEILPEVDLYVTLEPCTMCA 87 + K+I NR L +AHAEI A+ + G L LP L V PC MC Sbjct: 62 SGKLIVIGVNRVIPLNCSSAHAEITALTLAQQMLGVYDLGGPGLPAHQLVVNWSPCAMCF 121 Query: 88 AAISLARIRRLYYGASNPK 106 A+ + IR L ++P+ Sbjct: 122 GAVLWSGIRSLVIAGADPE 140 >gi|57652067|ref|YP_186652.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus COL] gi|151221874|ref|YP_001332696.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus str. Newman] gi|161509986|ref|YP_001575645.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|258450849|ref|ZP_05698907.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A5948] gi|262050319|ref|ZP_06023164.1| riboflavin specific deaminase [Staphylococcus aureus D30] gi|262053078|ref|ZP_06025250.1| riboflavin specific deaminase [Staphylococcus aureus 930918-3] gi|284024817|ref|ZP_06379215.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus aureus subsp. aureus 132] gi|294849930|ref|ZP_06790669.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9754] gi|304380637|ref|ZP_07363309.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|57286253|gb|AAW38347.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus COL] gi|150374674|dbj|BAF67934.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus str. Newman] gi|160368795|gb|ABX29766.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257861473|gb|EEV84276.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A5948] gi|259159032|gb|EEW44104.1| riboflavin specific deaminase [Staphylococcus aureus 930918-3] gi|259161579|gb|EEW46176.1| riboflavin specific deaminase [Staphylococcus aureus D30] gi|269941247|emb|CBI49636.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus TW20] gi|294823269|gb|EFG39699.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9754] gi|304340832|gb|EFM06760.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315195936|gb|EFU26300.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus aureus subsp. aureus CGS01] gi|329314447|gb|AEB88860.1| Riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus T0131] gi|329727002|gb|EGG63459.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus 21189] Length = 347 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ A + + PVGAV V +I+ + L+ HAE+ A+ M Sbjct: 4 FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 56 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +Q+ +Y+TLEPC+ C I +I ++ Y +N + Sbjct: 57 --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHG 107 Query: 119 LATCH-HSPEIYPGISEQRSRQIIQDFFKER 148 T H E+ + ++R+ Q+ QDFFK + Sbjct: 108 DETLRAHGIEV-ECVDDERASQLYQDFFKAK 137 >gi|282927316|ref|ZP_06334937.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9765] gi|282592080|gb|EFB97105.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9765] Length = 347 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ A + + PVGAV V +I+ + L+ HAE+ A+ M Sbjct: 4 FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 56 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +Q+ +Y+TLEPC+ C I +I ++ Y +N + Sbjct: 57 --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHG 107 Query: 119 LATCH-HSPEIYPGISEQRSRQIIQDFFKER 148 T H E+ + ++R+ Q+ QDFFK + Sbjct: 108 DETLRAHGIEV-ECVDDERASQLYQDFFKAK 137 >gi|219849511|ref|YP_002463944.1| riboflavin biosynthesis protein RibD [Chloroflexus aggregans DSM 9485] gi|219543770|gb|ACL25508.1| riboflavin biosynthesis protein RibD [Chloroflexus aggregans DSM 9485] Length = 409 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 23/150 (15%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL AQ AA R P VGAV V + +I+ +R + HAE+ A+R Sbjct: 10 YMRRALVLAQQAAGRTS-PNPMVGAVIVKDGRIVGEGYHR----RAGEPHAEVEALR--- 61 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 ++ E +YVTLEPC C AI A I +YY ++P + +G Sbjct: 62 --VAGEAARGATMYVTLEPCAHVGRTPPCTDAIIAAGITEVYYAIADPN--PLVSGKGHA 117 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 LA + G+ E + ++ + FFK Sbjct: 118 QLAAA--GIRVQCGVCEAEAFELNRPFFKH 145 >gi|319785885|ref|YP_004145360.1| cytosine deaminase [Pseudoxanthomonas suwonensis 11-1] gi|317464397|gb|ADV26129.1| Cytosine deaminase [Pseudoxanthomonas suwonensis 11-1] Length = 158 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%) Query: 7 FMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++ A+EEA+ IP+G A+ + ++ R NR + D + H E A R R Sbjct: 10 MLAIAVEEARQGLAEGGIPIGAALFAADGTLLGRGHNRRVQENDPSVHGETDAFRKAGR- 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG-ASNPKGG 108 Q + + TL PC C+ + I + G A N +GG Sbjct: 69 --QRSYRDTIMVTTLSPCWYCSGLVRQFGIGTVVMGEAVNFQGG 110 >gi|299147398|ref|ZP_07040463.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_23] gi|298514676|gb|EFI38560.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_23] Length = 351 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M +E A+N L N P VGAV V N +II + ++ AHAE+ AIR Sbjct: 12 YMRRCIELAKNG-LCNVPPNPTVGAVIVCNGRIIGEGYH----IRCGEAHAEVNAIR--- 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + +L +YV+LEPC+ CA I +I R+ G +P G Q Sbjct: 64 SVKDESLLKHSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVTGRGIQKL 123 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ GI E+ + +I+ F Sbjct: 124 RDA----GREVTVGILEKECQSLIRRFI 147 >gi|254468535|ref|ZP_05081941.1| riboflavin biosynthesis protein RibD [beta proteobacterium KB13] gi|207087345|gb|EDZ64628.1| riboflavin biosynthesis protein RibD [beta proteobacterium KB13] Length = 363 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 21/129 (16%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V+++KII A ++E HAE++AI C+ + +L + L+VTLEPC Sbjct: 31 VGAVIVVDDKII--ATGYHQEFG--GPHAEVVAIH-NCK--DKALLKKSTLFVTLEPCAH 83 Query: 86 ------CAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 C I I+R+ + NPK GI + E+ G+ E ++ Sbjct: 84 EGKTPPCLDLILKHDIKRVVIASQDPNPKVNGIS------IKSLIEKGVEVDVGLMEDQA 137 Query: 138 RQIIQDFFK 146 + + FFK Sbjct: 138 FNLNKGFFK 146 >gi|239637909|ref|ZP_04678870.1| riboflavin biosynthesis protein RibD [Staphylococcus warneri L37603] gi|239596472|gb|EEQ79008.1| riboflavin biosynthesis protein RibD [Staphylococcus warneri L37603] Length = 347 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 44/161 (27%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM+ A++ AQ + + PVG+V V + +I+ + L+ HAE+ A+ M Sbjct: 4 FMNYAIQLAQMVDGQTGVNPPVGSVVVKDGRIVGIGAH----LRKGDKHAEVQALDM--- 56 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----------KGG 108 +Q +YV+LEPCT C I A I ++ Y + K Sbjct: 57 --AQSEANGATIYVSLEPCTHHGSTPPCVDKIIEAGIHKVIYAVKDTTLISKGDDILKNA 114 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 GIE Q+ +A Q+ QDFF +R Sbjct: 115 GIEVEFQYNAVAA-----------------QLYQDFFTAKR 138 >gi|229080603|ref|ZP_04213123.1| Riboflavin biosynthesis protein [Bacillus cereus Rock4-2] gi|228702704|gb|EEL55170.1| Riboflavin biosynthesis protein [Bacillus cereus Rock4-2] Length = 360 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 25/149 (16%) Query: 8 MSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M ALE A+ A++ + VG+V V +N+I+ + +K HAEI AIRM Sbjct: 1 MKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-- 52 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + E +YVTLEPC+ CA AI A I+++ +P G + Sbjct: 53 ---AGEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKIL 109 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ G+ E+ S+++ + F K Sbjct: 110 QDAGI----EVLVGVCEEESKKMNEVFNK 134 >gi|323702710|ref|ZP_08114371.1| riboflavin biosynthesis protein RibD [Desulfotomaculum nigrificans DSM 574] gi|323532373|gb|EGB22251.1| riboflavin biosynthesis protein RibD [Desulfotomaculum nigrificans DSM 574] Length = 375 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 23/155 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M + FM ALE A+ A R P VGAV V + +++ + K TAHAE++ Sbjct: 1 MDQDKHFMQMALELARKARGRTS-PNPMVGAVVVKDGQVV----GQGWHAKAGTAHAEVV 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ + E +YVTLEPC C A+ A ++R+ ++P Sbjct: 56 ALAD-----AGEQARGATVYVTLEPCCHHGRTGPCTEALLKAGVKRVVAAMTDPNPLVAG 110 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G A E+ G+ E +RQ+ + F K Sbjct: 111 KGLAILRDAGV----EVQVGVLESEARQLNEIFIK 141 >gi|300813870|ref|ZP_07094175.1| riboflavin biosynthesis protein RibD [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512057|gb|EFK39252.1| riboflavin biosynthesis protein RibD [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 372 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 28/152 (18%) Query: 7 FMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +MS A+E A+ L N + VG V V +++II R +++ D+ HAE +AI Sbjct: 10 YMSLAMELAEKGKGFTLTNPM-VGCVIVNDDRIIGRG--YHKKFGDL--HAETMAIEDAK 64 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIENG 113 + + E L LYV LEPC C AI +I+++ +P G GI+ Sbjct: 65 K--NGESLEGSTLYVNLEPCCHYGKQPPCTKAIIENKIKKVVIANVDPNKKVSGKGIK-- 120 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 TL E+ GI E+ ++ ++FF Sbjct: 121 ----TLEDA--GIEVVEGIMEEEGLKLNEEFF 146 >gi|228959585|ref|ZP_04121266.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|228800077|gb|EEM47013.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar pakistani str. T13001] Length = 358 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 25/149 (16%) Query: 8 MSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M ALE A+ A++ + VG+V V +N+I+ + +K HAEI AIRM Sbjct: 1 MKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-- 52 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + E +YVTLEPC+ CA AI A I+++ +P G + Sbjct: 53 ---AGEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKIL 109 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ G+ E+ S+++ + F K Sbjct: 110 QDAGI----EVLVGVCEEESKKMNEVFNK 134 >gi|332687244|ref|YP_004457018.1| cytosine deaminase [Melissococcus plutonius ATCC 35311] gi|332371253|dbj|BAK22209.1| cytosine deaminase [Melissococcus plutonius ATCC 35311] Length = 164 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 13/104 (12%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV-------TAHAEILAI 59 ++ +E ++ A P GA+ ++ AGN E +++ T HAE Sbjct: 13 YLKRCIEISKQAKKNGNTPFGAL------LVDDAGNILFEQENIEITEHICTGHAETTLA 66 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + S++ L LY T EPC MC I I + +G + Sbjct: 67 ARASKKYSKDFLWGCTLYTTAEPCAMCTGTIYWGNIGTIVFGMT 110 >gi|255009912|ref|ZP_05282038.1| putative riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacteroides fragilis 3_1_12] gi|313147700|ref|ZP_07809893.1| riboflavin biosynthesis protein ribD [Bacteroides fragilis 3_1_12] gi|313136467|gb|EFR53827.1| riboflavin biosynthesis protein ribD [Bacteroides fragilis 3_1_12] Length = 346 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 17/126 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V + +II + ++ AHAE+ AIR + +L +YV+LEPC+ Sbjct: 27 VGAVIVCDEQIIGEGYH----VRCGEAHAEVNAIR---SVKDPSLLKRSTIYVSLEPCSH 79 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I +I ++ G +P G Q A E+ G+ E+ R+ Sbjct: 80 HGKTPPCADLIIEKQIPKIVIGCQDPFSKVAGKGIQKLRNA----GREVIVGVLEKECRE 135 Query: 140 IIQDFF 145 +IQ F Sbjct: 136 LIQKFI 141 >gi|154706505|ref|YP_001424060.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Coxiella burnetii Dugway 5J108-111] gi|154355791|gb|ABS77253.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Coxiella burnetii Dugway 5J108-111] Length = 354 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 19/96 (19%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V ++KIIS ++ L HAE+ AI+ + LYVTLEPC Sbjct: 29 VGAVVVKDDKIISTGFHKRSGL----PHAEVEAIKS-----LDDKARGAALYVTLEPCCH 79 Query: 86 ------CAAAISLARIRRLYYGASNPK----GGGIE 111 C I + I+ +YYG +P G GIE Sbjct: 80 FGKTPPCTDLIIQSGIKAVYYGLHDPNLAVCGKGIE 115 >gi|298695036|gb|ADI98258.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus ED133] Length = 343 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 24/131 (18%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 PVGAV V +I+ + L+ HAE+ A+ M +Q+ +Y+TLEPC+ Sbjct: 20 PVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM-----AQQNAEGATIYITLEPCS 70 Query: 85 M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC-HHSPEIYPGISEQRS 137 C I +I ++ Y +N + T H E+ + ++R+ Sbjct: 71 HFGLTPPCVNKIIDCKIAKVVYATK-------DNSLDTHGDDTLRDHGIEV-ECVDDERA 122 Query: 138 RQIIQDFFKER 148 Q+ QDFFK + Sbjct: 123 SQLYQDFFKAK 133 >gi|215918961|ref|NP_819453.2| guanine deaminase [Coxiella burnetii RSA 493] gi|206583846|gb|AAO89967.2| guanine deaminase [Coxiella burnetii RSA 493] Length = 168 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 28/104 (26%) Query: 25 PVGAVAVLNNKIISRAG---------NRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75 P GAV V +I ++G N + + D TAHAE+ IR R L+ L + Sbjct: 14 PFGAVIV---QIDDKSGRVFRYWVDHNHSVDWHDPTAHAEMSVIRKAARELNVTDLGHIR 70 Query: 76 ----------------LYVTLEPCTMCAAAISLARIRRLYYGAS 103 +Y + EPC MC AAI A I L + A+ Sbjct: 71 KEDSKLSQPSEWSHCVIYSSAEPCPMCMAAIYWAGIHYLVFSAT 114 >gi|254515088|ref|ZP_05127149.1| cytosine deaminase [gamma proteobacterium NOR5-3] gi|219677331|gb|EED33696.1| cytosine deaminase [gamma proteobacterium NOR5-3] Length = 166 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 4/106 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A E+A+ +PVGA N K++S NR + D + H E A R R Sbjct: 21 MLGVAFEQAKRGFEEGGVPVGAAMFDGNGKLLSVGRNRRVQEGDPSIHGETDAFRKAGR- 79 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 Q+ + L TL PC C+ + RI + G S G ++ Sbjct: 80 --QKNYRDCVLVSTLAPCWYCSGLVRQFRIGTVVVGESQNFAGHLD 123 >gi|314933920|ref|ZP_07841285.1| riboflavin biosynthesis protein RibD [Staphylococcus caprae C87] gi|313654070|gb|EFS17827.1| riboflavin biosynthesis protein RibD [Staphylococcus caprae C87] Length = 349 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 44/161 (27%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM+ A++ AQ + I PVG+V V + +I+ + LK HAE+ A+ M Sbjct: 4 FMNYAIQLAQMVDGQTGINPPVGSVVVKDGRIVGLGAH----LKKGDKHAEVQALDMAG- 58 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----------KGG 108 E + +YV+LEPCT C I IR++ Y + K Sbjct: 59 ----ENAKDATIYVSLEPCTHHGSTPPCVNKIIEFGIRKVIYAVKDTTLASKGDEILKEA 114 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 GIE QF + + ++ +DFF +R Sbjct: 115 GIEVEFQF-----------------NENAAELYKDFFTAKR 138 >gi|298529749|ref|ZP_07017152.1| riboflavin biosynthesis protein RibD [Desulfonatronospira thiodismutans ASO3-1] gi|298511185|gb|EFI35088.1| riboflavin biosynthesis protein RibD [Desulfonatronospira thiodismutans ASO3-1] Length = 371 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 16/125 (12%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGA+ ++I+ + +R HAE+ AI + L +YVTLEPC Sbjct: 27 VGALVTCGDRIMGKGWHR----APGENHAEVEAIENARE--NGADLSSCRMYVTLEPCNH 80 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C AA+ A I + GA +P G +F +H + G+ EQ+ Sbjct: 81 HGRTPPCTAAVIQAGIPEIIIGARDPNSQVQGGGAEFLR----NHGLRVTVGVEEQKCLD 136 Query: 140 IIQDF 144 +I DF Sbjct: 137 LIADF 141 >gi|323439574|gb|EGA97294.1| riboflavin specific deaminase [Staphylococcus aureus O11] gi|323442021|gb|EGA99657.1| riboflavin specific deaminase [Staphylococcus aureus O46] Length = 343 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 24/131 (18%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 PVGAV V +I+ + L+ HAE+ A+ M +Q+ +Y+TLEPC+ Sbjct: 20 PVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM-----AQQNAEGATIYITLEPCS 70 Query: 85 M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC-HHSPEIYPGISEQRS 137 C I +I ++ Y +N + T H E+ + ++R+ Sbjct: 71 HFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHGDETLRDHGIEV-ECVDDERA 122 Query: 138 RQIIQDFFKER 148 Q+ QDFFK + Sbjct: 123 SQLYQDFFKAK 133 >gi|313680606|ref|YP_004058345.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Oceanithermus profundus DSM 14977] gi|313153321|gb|ADR37172.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Oceanithermus profundus DSM 14977] Length = 380 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 54/122 (44%), Gaps = 32/122 (26%) Query: 7 FMSCAL---EEAQNAALRNEIPVGAVAVLNNKIIS-----RAGNRNRELKDVTAHAEILA 58 FM AL E A+ N I VGAV V +I+ RAG HAE+ A Sbjct: 10 FMQRALALAERARGHTSPNPI-VGAVVVSGGRIVGEGFHPRAGE---------PHAEVFA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP---KGGG 109 +R + E +YVTLEPC C+ A+ A + R+ Y A++P GGG Sbjct: 60 LRQ-----AGEAARGATVYVTLEPCNHHGRTPPCSLALLEAGVSRVVYAAADPGETSGGG 114 Query: 110 IE 111 E Sbjct: 115 AE 116 >gi|238490276|ref|XP_002376375.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357] gi|220696788|gb|EED53129.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357] Length = 162 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 1/91 (1%) Query: 15 AQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73 A+ A + P G+V V K+I NR DVT H E ++ + L+ Sbjct: 17 AREALEAGDSPFGSVLVDAAGKVIYEDRNRTVTEADVTWHPEFTIVKWAQKNLTPTERAA 76 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +Y + E C MCAAA + A + R+ Y +S Sbjct: 77 ATVYTSGEHCPMCAAAHANAGLGRIVYASST 107 >gi|153940820|ref|YP_001392147.1| riboflavin biosynthesis protein RibD [Clostridium botulinum F str. Langeland] gi|152936716|gb|ABS42214.1| riboflavin biosynthesis protein RibD [Clostridium botulinum F str. Langeland] gi|295320152|gb|ADG00530.1| riboflavin biosynthesis protein RibD [Clostridium botulinum F str. 230613] Length = 365 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 29/158 (18%) Query: 1 MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ N +M AL+ A+ + N P VGA+ V NNKII ++ HAE+ A Sbjct: 1 MEDYNFYMEKALKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFG----GPHAEVYA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108 +R + E +YVTLEPC+ CA +I I + +P +G Sbjct: 57 LRE-----AGEKAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVEGR 111 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 GI+ Q + E+ GI E+ S+++ + F K Sbjct: 112 GIDILKQ--------NGIEVVTGIMEKESKKLNEVFIK 141 >gi|319941823|ref|ZP_08016145.1| AMP deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Sutterella wadsworthensis 3_1_45B] gi|319804756|gb|EFW01623.1| AMP deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Sutterella wadsworthensis 3_1_45B] Length = 415 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 20/114 (17%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M AL +A+ A R P VGAV V N +++ AG+ R HAE++A+R Sbjct: 56 DAWMDLALAQARKA-WRISPPNPSVGAVIVRNGRLVG-AGHTQRTGGP---HAEVMALRS 110 Query: 62 GC-RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLY--YGASNPK 106 R LS E +YVTLEPC+ CA A+ +++ R+ G NPK Sbjct: 111 AFERGLSVE---GATVYVTLEPCSHYGRTPPCALALIQSKVGRVVAAVGDPNPK 161 >gi|299753369|ref|XP_001833230.2| diaminohydroxyphosphoribosylamino-pyrimidine deaminase [Coprinopsis cinerea okayama7#130] gi|298410269|gb|EAU88503.2| diaminohydroxyphosphoribosylamino-pyrimidine deaminase [Coprinopsis cinerea okayama7#130] Length = 170 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 27/126 (21%) Query: 6 VFMSCALEEAQNAA-LRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 V+M ALEEA+ A + VG V V L +K + + +REL T HAE A+ Sbjct: 9 VYMKMALEEAEKAVPVPGAFCVGCVLVARLLHKSVVLSTGYSRELPGNT-HAEANALAKV 67 Query: 63 CRILSQE----------------ILPEVDLYVTLEPCTM-------CAAAISLARIRRLY 99 I +E IL D+Y TLEPC++ CA A+ A++RR Sbjct: 68 AEISPKEWSALSESYEASSDLSKILECTDVYTTLEPCSIRTSGLSPCADALIKAKVRRCI 127 Query: 100 YGASNP 105 G + P Sbjct: 128 IGVNEP 133 >gi|168179301|ref|ZP_02613965.1| riboflavin biosynthesis protein RibD [Clostridium botulinum NCTC 2916] gi|182669874|gb|EDT81850.1| riboflavin biosynthesis protein RibD [Clostridium botulinum NCTC 2916] Length = 365 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 29/158 (18%) Query: 1 MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ N +M AL+ A+ + N P VGA+ V NNKII ++ HAE+ A Sbjct: 1 MEDYNFYMEKALKLAKRGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFG----GPHAEVYA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108 +R + E +YVTLEPC+ CA +I I + +P +G Sbjct: 57 LRE-----AGEKAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVEGR 111 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 GI+ Q + E+ GI E+ S+++ + F K Sbjct: 112 GIDILKQ--------NGIEVVTGIMEKESKKLNEVFIK 141 >gi|120405009|ref|YP_954838.1| CMP/dCMP deaminase [Mycobacterium vanbaalenii PYR-1] gi|119957827|gb|ABM14832.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium vanbaalenii PYR-1] Length = 164 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 4/104 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAG-NRNRELKDVTAHAEILAIRMGCRI 65 + A+EEA+ IP+GA + + +G NR +L D + HAE A R R Sbjct: 24 MLEVAVEEARKGLAEGGIPIGAALFSTDGALLGSGHNRRVQLGDPSVHAETDAFRNAGR- 82 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 Q + TL PC C+ + I + G S GG Sbjct: 83 --QRGYRSTIMVTTLSPCWYCSGLVRQFNIGAVVIGESRTFTGG 124 >gi|87161517|ref|YP_494408.1| riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195585|ref|YP_500391.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus NCTC 8325] gi|87127491|gb|ABD22005.1| riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203143|gb|ABD30953.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus NCTC 8325] Length = 334 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 24/131 (18%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 PVGAV V +I+ + L+ HAE+ A+ M +Q+ +Y+TLEPC+ Sbjct: 11 PVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM-----AQQNAEGATIYITLEPCS 61 Query: 85 M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-HSPEIYPGISEQRS 137 C I +I ++ Y +N + T H E+ + ++R+ Sbjct: 62 HFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHGDETLRAHGIEV-ECVDDERA 113 Query: 138 RQIIQDFFKER 148 Q+ QDFFK + Sbjct: 114 SQLYQDFFKAK 124 >gi|254568330|ref|XP_002491275.1| Subunit of tRNA-specific adenosine-34 deaminase [Pichia pastoris GS115] gi|238031072|emb|CAY68995.1| Subunit of tRNA-specific adenosine-34 deaminase [Pichia pastoris GS115] gi|328352208|emb|CCA38607.1| hypothetical protein PP7435_Chr2-0926 [Pichia pastoris CBS 7435] Length = 305 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 11/103 (10%) Query: 13 EEAQNAALRNEIPV-GAVAVLNNKI--ISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 E + + L++E+P+ VA K+ I + +N +L H+ +LAIR ++ + Sbjct: 165 ELSVSPPLKDELPIFTMVADRKGKVLTIKQDERKNHQLH----HSTMLAIRDVAKLQQND 220 Query: 70 ----ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 +L + +Y T EPC MC A+ +RI RL + GG Sbjct: 221 PKSYLLLDCVIYTTHEPCPMCCMALLHSRIERLVFLKDMTTGG 263 >gi|298209105|ref|YP_003717284.1| riboflavin biosynthesis protein RibD [Croceibacter atlanticus HTCC2559] gi|83849032|gb|EAP86901.1| riboflavin biosynthesis protein RibD [Croceibacter atlanticus HTCC2559] Length = 333 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 25/130 (19%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +NKII ++ L AHAE+ AI + + +L + +YV+LEPC+ Sbjct: 28 VGSVIVYDNKIIGEGWHQIAGL----AHAEVNAINA---VKDKSLLKKSTIYVSLEPCSH 80 Query: 86 ------CAAAISLARIRRLYYGASNP----KGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 CA I I + G +P KG GI+ A C +I G+ E Sbjct: 81 YGKTPPCADLIIANNIPNVVIGTVDPFAKVKGQGIKKLLD----AGC----KITVGVLED 132 Query: 136 RSRQIIQDFF 145 +++ + FF Sbjct: 133 ECQELNKRFF 142 >gi|194881131|ref|XP_001974702.1| GG21908 [Drosophila erecta] gi|190657889|gb|EDV55102.1| GG21908 [Drosophila erecta] Length = 360 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134 D+Y+ EPC MC+ A+ +R +R+++ N G + Q +++ +H E++ +E Sbjct: 296 DVYLLQEPCLMCSMALVHSRAKRVFF-VKNSDNGALATRFQLHSVRELNHHYEVFQFTTE 354 Query: 135 Q 135 + Sbjct: 355 E 355 >gi|15924761|ref|NP_372295.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus Mu50] gi|15927345|ref|NP_374878.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus N315] gi|148268246|ref|YP_001247189.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus JH9] gi|150394314|ref|YP_001316989.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus JH1] gi|156980087|ref|YP_001442346.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus Mu3] gi|253315858|ref|ZP_04839071.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006556|ref|ZP_05145157.2| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794151|ref|ZP_05643130.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9781] gi|258420684|ref|ZP_05683623.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9719] gi|258438334|ref|ZP_05689618.1| riboflavin specific deaminase [Staphylococcus aureus A9299] gi|258443792|ref|ZP_05692131.1| riboflavin specific deaminase [Staphylococcus aureus A8115] gi|258446003|ref|ZP_05694179.1| riboflavin specific deaminase [Staphylococcus aureus A6300] gi|258448269|ref|ZP_05696396.1| riboflavin specific deaminase [Staphylococcus aureus A6224] gi|258454203|ref|ZP_05702174.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A5937] gi|282893262|ref|ZP_06301496.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8117] gi|282927897|ref|ZP_06335508.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A10102] gi|295406080|ref|ZP_06815888.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8819] gi|296276038|ref|ZP_06858545.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus MR1] gi|297244995|ref|ZP_06928872.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8796] gi|13701564|dbj|BAB42857.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus N315] gi|14247543|dbj|BAB57933.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus Mu50] gi|147741315|gb|ABQ49613.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus aureus subsp. aureus JH9] gi|149946766|gb|ABR52702.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus JH1] gi|156722222|dbj|BAF78639.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus Mu3] gi|257788123|gb|EEV26463.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9781] gi|257843288|gb|EEV67698.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9719] gi|257848378|gb|EEV72369.1| riboflavin specific deaminase [Staphylococcus aureus A9299] gi|257851198|gb|EEV75141.1| riboflavin specific deaminase [Staphylococcus aureus A8115] gi|257855245|gb|EEV78184.1| riboflavin specific deaminase [Staphylococcus aureus A6300] gi|257858508|gb|EEV81384.1| riboflavin specific deaminase [Staphylococcus aureus A6224] gi|257863655|gb|EEV86412.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A5937] gi|282590407|gb|EFB95486.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A10102] gi|282764580|gb|EFC04706.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8117] gi|285817450|gb|ADC37937.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Staphylococcus aureus 04-02981] gi|294969077|gb|EFG45098.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8819] gi|297178075|gb|EFH37323.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8796] gi|315130592|gb|EFT86578.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus CGS03] gi|329727599|gb|EGG64055.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus 21172] Length = 347 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ A + + PVGAV V +I+ + L+ HAE+ A+ M Sbjct: 4 FMDYAIQLANMVQGQTGVNPPVGAVVVNEGRIVGIGAH----LRKGDKHAEVQALDM--- 56 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +Q+ +Y+TLEPC+ C I +I ++ Y +N + Sbjct: 57 --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHG 107 Query: 119 LATCH-HSPEIYPGISEQRSRQIIQDFFKER 148 T H E+ + ++R+ Q+ QDFFK + Sbjct: 108 DETLRAHGIEV-ECVDDERASQLYQDFFKAK 137 >gi|320139809|gb|EFW31673.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus MRSA131] Length = 343 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 24/131 (18%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 PVGAV V +I+ + L+ HAE+ A+ M +Q+ +Y+TLEPC+ Sbjct: 20 PVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM-----AQQNAEGATIYITLEPCS 70 Query: 85 M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-HSPEIYPGISEQRS 137 C I +I ++ Y +N + T H E+ + ++R+ Sbjct: 71 HFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHGDETLRAHGIEV-ECVDDERA 122 Query: 138 RQIIQDFFKER 148 Q+ QDFFK + Sbjct: 123 SQLYQDFFKAK 133 >gi|295088113|emb|CBK69636.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Bacteroides xylanisolvens XB1A] Length = 351 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M +E A+N L N P VGAV V N +II + ++ AHAE+ AIR Sbjct: 12 YMRRCIELAKNG-LCNVSPNPMVGAVIVCNGRIIGEGYH----IRCGEAHAEVNAIR--- 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + +L +YV+LEPC+ CA I +I R+ G +P G Q Sbjct: 64 SVKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGRGIQKL 123 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ E+ + +I+ F Sbjct: 124 RDA----GREVTVGVLEEECKSLIRRFI 147 >gi|302525979|ref|ZP_07278321.1| cytidine/deoxycytidine deaminase [Streptomyces sp. AA4] gi|302434874|gb|EFL06690.1| cytidine/deoxycytidine deaminase [Streptomyces sp. AA4] Length = 147 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 4/106 (3%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + ++ A EEA+ +P+GA + K++ R NR + D + HAE A R Sbjct: 3 DDLLAVAREEAEAGKAEGGVPIGAALFDRDGKLLGRGHNRRVQDGDPSLHAETAAFRAAG 62 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 R + + + TL PC C+ + I + G S GG Sbjct: 63 R---RPHYRDTIMVTTLSPCWYCSGLVRQFGIPHVVIGESRTFTGG 105 >gi|320529850|ref|ZP_08030927.1| riboflavin biosynthesis protein RibD [Selenomonas artemidis F0399] gi|320137868|gb|EFW29773.1| riboflavin biosynthesis protein RibD [Selenomonas artemidis F0399] Length = 369 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 54/118 (45%), Gaps = 23/118 (19%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL A+ A R P VGAV V + ++ +R HAEI A+RM Sbjct: 11 FMWEALHLAEFARGRTS-PNPLVGAVIVRDGIVVGSGWHRVAG----EPHAEIHALRM-- 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111 + E+ LYVTLEPC+ CA A+ A I R+ S+P G GIE Sbjct: 64 ---AGELARGATLYVTLEPCSHHGRTGPCAEAVIAAGIARVVTALSDPNPVVAGHGIE 118 >gi|308814577|ref|YP_003934851.1| dCMP deaminase [Shigella phage SP18] gi|308206169|gb|ADO19568.1| dCMP deaminase [Shigella phage SP18] Length = 193 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 7/61 (11%) Query: 40 AGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 A ++N E+ HAE+ AI R+ S + +YVTL PC CA AIS + I++L Sbjct: 96 AWSKNNEI-----HAELNAILFAARMGSS--IEGATMYVTLSPCPDCAKAISQSGIKKLV 148 Query: 100 Y 100 Y Sbjct: 149 Y 149 >gi|314121791|ref|YP_004063910.1| deoxycytidylate deaminase [Enterobacteria phage vB_EcoM-VR7] gi|313151548|gb|ADR32604.1| deoxycytidylate deaminase [Enterobacteria phage vB_EcoM-VR7] Length = 193 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 7/61 (11%) Query: 40 AGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 A ++N E+ HAE+ AI R+ S + +YVTL PC CA AIS + I++L Sbjct: 96 AWSKNNEI-----HAELNAILFAARMGSS--IEGATMYVTLSPCPDCAKAISQSGIKKLV 148 Query: 100 Y 100 Y Sbjct: 149 Y 149 >gi|298482442|ref|ZP_07000628.1| riboflavin biosynthesis protein RibD [Bacteroides sp. D22] gi|298271421|gb|EFI12996.1| riboflavin biosynthesis protein RibD [Bacteroides sp. D22] Length = 351 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M +E A+N L N P VGAV V N +II + ++ AHAE+ AIR Sbjct: 12 YMRRCIELAKNG-LCNVSPNPMVGAVIVCNGRIIGEGYH----IRCGEAHAEVNAIR--- 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + +L +YV+LEPC+ CA I +I R+ G +P G Q Sbjct: 64 SVKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGRGIQKL 123 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ E+ + +I+ F Sbjct: 124 RDA----GREVTVGVLEEECKSLIRRFI 147 >gi|91763228|ref|ZP_01265192.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus Pelagibacter ubique HTCC1002] gi|91717641|gb|EAS84292.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus Pelagibacter ubique HTCC1002] Length = 366 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 21/112 (18%) Query: 3 KGNVFMSCALE--EAQNAALRNEIPVGAVAVLNNKIIS--RAGNRNRELKDVTAHAEILA 58 K +FM AL +A++ VG V V NNKI+S + G + T HAE A Sbjct: 11 KDKIFMELALNLAKARHGLTGINPSVGCVIVKNNKILSIGQTGFKG------TPHAEFNA 64 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASN 104 I+ S E + +YVTLEPC+ C I +I+ + YG + Sbjct: 65 IKN-----SHENIEGSKMYVTLEPCSHYGKTPPCTNIIIKNKIKEVVYGVED 111 >gi|193216732|ref|YP_001999974.1| deoxycytidylate deaminase [Mycoplasma arthritidis 158L3-1] gi|193002055|gb|ACF07270.1| deoxycytidylate deaminase [Mycoplasma arthritidis 158L3-1] Length = 173 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI + I S I P LYVT PC MCA + ++I+++ Y Sbjct: 88 HAEQNAI-INANITSSHIEPGSTLYVTHSPCAMCAKLVVQSKIKKVVYA 135 >gi|153005591|ref|YP_001379916.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter sp. Fw109-5] gi|152029164|gb|ABS26932.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter sp. Fw109-5] Length = 401 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 17/107 (15%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+ EA R VGAV V ++++R + HAE++A+ Sbjct: 34 FMRAAVREATKGLGRTSPNPAVGAVLVKGGRVVAR----GHHARAGGPHAEVVAL----- 84 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + DLY TLEPC C+ A+ A +RR++ G+++P Sbjct: 85 RAAGARARGADLYTTLEPCDHFGRTPPCSVAVLEAGVRRVFVGSADP 131 >gi|228916001|ref|ZP_04079574.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228843596|gb|EEM88672.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 350 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 19/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +N+I+ + +K HAEI AIRM + E +YVTLEPC+ Sbjct: 11 VGSVIVNDNRIVGIGAH----MKAGEPHAEIHAIRM-----AGEQARGGTIYVTLEPCSH 61 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA AI A I+++ +P G Q A E+ G+ E+ S++ Sbjct: 62 HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIQILQDAGI----EVLVGVCEEESKK 117 Query: 140 IIQDFFK 146 + + F K Sbjct: 118 MNEVFNK 124 >gi|169772375|ref|XP_001820656.1| cytosine deaminase [Aspergillus oryzae RIB40] gi|83768517|dbj|BAE58654.1| unnamed protein product [Aspergillus oryzae] Length = 162 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 1/91 (1%) Query: 15 AQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73 A+ A + P G+V V K+I NR DVT H E ++ + L+ Sbjct: 17 AREALEAGDSPFGSVLVDAAGKVIYEDRNRTVTEADVTWHPEFTIVKWAQKNLTPTERAA 76 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +Y + E C MCAAA + A + R+ Y +S Sbjct: 77 ATVYTSGEHCPMCAAAHANAGLGRIVYASST 107 >gi|160885546|ref|ZP_02066549.1| hypothetical protein BACOVA_03546 [Bacteroides ovatus ATCC 8483] gi|156109168|gb|EDO10913.1| hypothetical protein BACOVA_03546 [Bacteroides ovatus ATCC 8483] Length = 351 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M +E A+N L N P VGAV V N +II + ++ AHAE+ AIR Sbjct: 12 YMRRCIELAKNG-LCNVPPNPTVGAVIVCNGRIIGEGYH----IRCGEAHAEVNAIR--- 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + +L +YV+LEPC+ CA I +I R+ G +P G Q Sbjct: 64 SVKDESLLKHSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGRGIQKL 123 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ GI E+ + +I+ F Sbjct: 124 RDA----GREVTVGILEEECQSLIRRFI 147 >gi|54297135|ref|YP_123504.1| riboflavin biosynthesis protein RibD [Legionella pneumophila str. Paris] gi|53750920|emb|CAH12331.1| Riboflavin biosynthesis protein RibD [Legionella pneumophila str. Paris] Length = 357 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 21/109 (19%) Query: 7 FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 F+ ALE+A+ VGAVAV N II++A +R T HAE L Sbjct: 5 FLLAALEQAKLGRGFCAPNPSVGAVAVQNGNIIAQAWHRGAG----TPHAEQL------- 53 Query: 65 ILSQ--EILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 +LSQ P V LYVTLEPC C AI I+ + + +P Sbjct: 54 LLSQIPPQTPGVTLYVTLEPCNHWGKTPPCVDAIINHGIQEVVFSYFDP 102 >gi|221140247|ref|ZP_03564740.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus aureus subsp. aureus str. JKD6009] Length = 347 Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ A + + PVGAV V +I+ + L+ HAE+ A+ M Sbjct: 4 FMDYAIQLANMVQGQTGVNPPVGAVIVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 56 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +Q+ +Y+TLEPC+ C I +I ++ Y +N + Sbjct: 57 --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHG 107 Query: 119 LATCH-HSPEIYPGISEQRSRQIIQDFFKER 148 T H E+ + ++R+ Q+ QDFFK + Sbjct: 108 DETLRAHGIEV-ECVDDERASQLYQDFFKAK 137 >gi|215410398|ref|ZP_03419206.1| deaminase [Mycobacterium tuberculosis 94_M4241A] Length = 140 Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 24/48 (50%) Query: 43 RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90 R + D TAHAE LAIR C L E L L V PC MC ++ Sbjct: 10 RWAQTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSL 57 >gi|291527733|emb|CBK93319.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Eubacterium rectale M104/1] Length = 388 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 25/108 (23%) Query: 26 VGAVAVLNNKIISRAGN-RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 VGAV V + +II + R EL HAE A++ C+ Q ++YVTLEPC Sbjct: 27 VGAVIVKDGRIIGEGWHERYGEL-----HAERNALKH-CKESPQG----AEMYVTLEPCC 76 Query: 85 M------CAAAISLARIRRLYYGASNPK----GGGI----ENGTQFYT 118 C A+ A I+R+Y G+ +P GGGI E+G + T Sbjct: 77 HHGKQPPCVEAVIEAGIKRVYVGSDDPNPLVAGGGIKILKEHGIEVVT 124 >gi|322807186|emb|CBZ04760.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Clostridium botulinum H04402 065] Length = 365 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 29/158 (18%) Query: 1 MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ N +M AL+ A+ + N P VGA+ V NNKII ++ HAE+ A Sbjct: 1 MEDYNFYMEKALKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFG----GPHAEVYA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108 +R + E +YVTLEPC+ CA +I I + +P +G Sbjct: 57 LRE-----AGERAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVEGR 111 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 GI+ Q + E+ GI E+ S+++ + F K Sbjct: 112 GIDILKQ--------NGIEVVTGIMEKESKKLNEVFIK 141 >gi|229145969|ref|ZP_04274348.1| Riboflavin biosynthesis protein [Bacillus cereus BDRD-ST24] gi|228637577|gb|EEK94028.1| Riboflavin biosynthesis protein [Bacillus cereus BDRD-ST24] Length = 348 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 19/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +N+I+ + +K HAEI AIRM + E +YVTLEPC+ Sbjct: 11 VGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-----AGEQARGATIYVTLEPCSH 61 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA AI A I+++ +P G + A E+ G+ E+ S++ Sbjct: 62 HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGI----EVLVGVCEEESKK 117 Query: 140 IIQDFFK 146 + + F K Sbjct: 118 MNEVFNK 124 >gi|15607968|ref|NP_215343.1| deaminase [Mycobacterium tuberculosis H37Rv] gi|31792016|ref|NP_854509.1| deaminase [Mycobacterium bovis AF2122/97] gi|121636752|ref|YP_976975.1| putative deaminase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660606|ref|YP_001282129.1| putative deaminase [Mycobacterium tuberculosis H37Ra] gi|148822035|ref|YP_001286788.1| deaminase [Mycobacterium tuberculosis F11] gi|167967516|ref|ZP_02549793.1| hypothetical deaminase [Mycobacterium tuberculosis H37Ra] gi|215402619|ref|ZP_03414800.1| deaminase [Mycobacterium tuberculosis 02_1987] gi|215410407|ref|ZP_03419215.1| deaminase [Mycobacterium tuberculosis 94_M4241A] gi|215429679|ref|ZP_03427598.1| deaminase [Mycobacterium tuberculosis EAS054] gi|219556687|ref|ZP_03535763.1| deaminase [Mycobacterium tuberculosis T17] gi|224989223|ref|YP_002643910.1| putative deaminase [Mycobacterium bovis BCG str. Tokyo 172] gi|253797775|ref|YP_003030776.1| deaminase [Mycobacterium tuberculosis KZN 1435] gi|254231141|ref|ZP_04924468.1| hypothetical protein TBCG_00818 [Mycobacterium tuberculosis C] gi|254363766|ref|ZP_04979812.1| hypothetical deaminase [Mycobacterium tuberculosis str. Haarlem] gi|260199843|ref|ZP_05767334.1| deaminase [Mycobacterium tuberculosis T46] gi|260204018|ref|ZP_05771509.1| deaminase [Mycobacterium tuberculosis K85] gi|289442232|ref|ZP_06431976.1| deaminase [Mycobacterium tuberculosis T46] gi|289553086|ref|ZP_06442296.1| deaminase [Mycobacterium tuberculosis KZN 605] gi|289568782|ref|ZP_06449009.1| deaminase [Mycobacterium tuberculosis T17] gi|289573447|ref|ZP_06453674.1| deaminase [Mycobacterium tuberculosis K85] gi|289744553|ref|ZP_06503931.1| deaminase [Mycobacterium tuberculosis 02_1987] gi|289752878|ref|ZP_06512256.1| hypothetical deaminase [Mycobacterium tuberculosis EAS054] gi|289756916|ref|ZP_06516294.1| deaminase [Mycobacterium tuberculosis T85] gi|289760958|ref|ZP_06520336.1| deaminase [Mycobacterium tuberculosis GM 1503] gi|294996308|ref|ZP_06801999.1| deaminase [Mycobacterium tuberculosis 210] gi|297633340|ref|ZP_06951120.1| deaminase [Mycobacterium tuberculosis KZN 4207] gi|297730324|ref|ZP_06959442.1| deaminase [Mycobacterium tuberculosis KZN R506] gi|298524324|ref|ZP_07011733.1| hypothetical deaminase [Mycobacterium tuberculosis 94_M4241A] gi|306774951|ref|ZP_07413288.1| deaminase [Mycobacterium tuberculosis SUMu001] gi|306782137|ref|ZP_07420474.1| deaminase [Mycobacterium tuberculosis SUMu002] gi|306783494|ref|ZP_07421816.1| deaminase [Mycobacterium tuberculosis SUMu003] gi|306787858|ref|ZP_07426180.1| deaminase [Mycobacterium tuberculosis SUMu004] gi|306794851|ref|ZP_07433153.1| deaminase [Mycobacterium tuberculosis SUMu005] gi|306796597|ref|ZP_07434899.1| deaminase [Mycobacterium tuberculosis SUMu006] gi|306802455|ref|ZP_07439123.1| deaminase [Mycobacterium tuberculosis SUMu008] gi|306806664|ref|ZP_07443332.1| deaminase [Mycobacterium tuberculosis SUMu007] gi|306966863|ref|ZP_07479524.1| deaminase [Mycobacterium tuberculosis SUMu009] gi|306971054|ref|ZP_07483715.1| deaminase [Mycobacterium tuberculosis SUMu010] gi|307078786|ref|ZP_07487956.1| deaminase [Mycobacterium tuberculosis SUMu011] gi|307083347|ref|ZP_07492460.1| deaminase [Mycobacterium tuberculosis SUMu012] gi|313657649|ref|ZP_07814529.1| deaminase [Mycobacterium tuberculosis KZN V2475] gi|2916886|emb|CAA17634.1| POSSIBLE DEAMINASE [Mycobacterium tuberculosis H37Rv] gi|31617603|emb|CAD93713.1| POSSIBLE DEAMINASE [Mycobacterium bovis AF2122/97] gi|121492399|emb|CAL70867.1| Possible deaminase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600200|gb|EAY59210.1| hypothetical protein TBCG_00818 [Mycobacterium tuberculosis C] gi|134149280|gb|EBA41325.1| hypothetical deaminase [Mycobacterium tuberculosis str. Haarlem] gi|148504758|gb|ABQ72567.1| putative deaminase [Mycobacterium tuberculosis H37Ra] gi|148720562|gb|ABR05187.1| hypothetical deaminase [Mycobacterium tuberculosis F11] gi|224772336|dbj|BAH25142.1| putative deaminase [Mycobacterium bovis BCG str. Tokyo 172] gi|253319279|gb|ACT23882.1| deaminase [Mycobacterium tuberculosis KZN 1435] gi|289415151|gb|EFD12391.1| deaminase [Mycobacterium tuberculosis T46] gi|289437718|gb|EFD20211.1| deaminase [Mycobacterium tuberculosis KZN 605] gi|289537878|gb|EFD42456.1| deaminase [Mycobacterium tuberculosis K85] gi|289542536|gb|EFD46184.1| deaminase [Mycobacterium tuberculosis T17] gi|289685081|gb|EFD52569.1| deaminase [Mycobacterium tuberculosis 02_1987] gi|289693465|gb|EFD60894.1| hypothetical deaminase [Mycobacterium tuberculosis EAS054] gi|289708464|gb|EFD72480.1| deaminase [Mycobacterium tuberculosis GM 1503] gi|289712480|gb|EFD76492.1| deaminase [Mycobacterium tuberculosis T85] gi|298494118|gb|EFI29412.1| hypothetical deaminase [Mycobacterium tuberculosis 94_M4241A] gi|308216505|gb|EFO75904.1| deaminase [Mycobacterium tuberculosis SUMu001] gi|308325158|gb|EFP14009.1| deaminase [Mycobacterium tuberculosis SUMu002] gi|308331715|gb|EFP20566.1| deaminase [Mycobacterium tuberculosis SUMu003] gi|308335513|gb|EFP24364.1| deaminase [Mycobacterium tuberculosis SUMu004] gi|308336856|gb|EFP25707.1| deaminase [Mycobacterium tuberculosis SUMu005] gi|308342990|gb|EFP31841.1| deaminase [Mycobacterium tuberculosis SUMu006] gi|308346873|gb|EFP35724.1| deaminase [Mycobacterium tuberculosis SUMu007] gi|308350814|gb|EFP39665.1| deaminase [Mycobacterium tuberculosis SUMu008] gi|308355447|gb|EFP44298.1| deaminase [Mycobacterium tuberculosis SUMu009] gi|308359403|gb|EFP48254.1| deaminase [Mycobacterium tuberculosis SUMu010] gi|308363308|gb|EFP52159.1| deaminase [Mycobacterium tuberculosis SUMu011] gi|308366959|gb|EFP55810.1| deaminase [Mycobacterium tuberculosis SUMu012] gi|326904953|gb|EGE51886.1| deaminase [Mycobacterium tuberculosis W-148] gi|328457555|gb|AEB02978.1| deaminase [Mycobacterium tuberculosis KZN 4207] Length = 140 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 24/48 (50%) Query: 43 RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90 R + D TAHAE LAIR C L E L L V PC MC ++ Sbjct: 10 RWAQTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSL 57 >gi|212638856|ref|YP_002315376.1| riboflavin-specific pyrimidine reductase/deaminase [Anoxybacillus flavithermus WK1] gi|212560336|gb|ACJ33391.1| Riboflavin-specific pyrimidine reductase/deaminase [Anoxybacillus flavithermus WK1] Length = 358 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 25/120 (20%) Query: 7 FMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL+ AQ+A R + VGAV V + +I+ + LK HAE+ A+RM Sbjct: 5 YMRFALQLAQSA--RGQTSPNPLVGAVVVKHGEIVGFGAH----LKAGEPHAEVHALRM- 57 Query: 63 CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIEN 112 + E +YVTLEPC+ CA + +++R+ ++P G GIE Sbjct: 58 ----AGEKAEGATVYVTLEPCSHYGRTPPCADLLIEKKVKRVVVATTDPNPLVAGKGIEK 113 >gi|146412291|ref|XP_001482117.1| hypothetical protein PGUG_05880 [Meyerozyma guilliermondii ATCC 6260] Length = 365 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 18/65 (27%), Positives = 34/65 (52%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 +Y + EPC MC A+ +RI ++ Y P GG+E+ Q + + +I+ I E+ Sbjct: 287 VYTSHEPCIMCCMALVHSRISKITYIKPVPSTGGLESHYQLGDRPSLNWRFKIWKWIGEE 346 Query: 136 RSRQI 140 +++ Sbjct: 347 EMQKL 351 >gi|253735372|ref|ZP_04869537.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus TCH130] gi|269203407|ref|YP_003282676.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus ED98] gi|253726661|gb|EES95390.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus TCH130] gi|262075697|gb|ACY11670.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus ED98] Length = 343 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 24/131 (18%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 PVGAV V +I+ + L+ HAE+ A+ M +Q+ +Y+TLEPC+ Sbjct: 20 PVGAVVVNEGRIVGIGAH----LRKGDKHAEVQALDM-----AQQNAEGATIYITLEPCS 70 Query: 85 M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-HSPEIYPGISEQRS 137 C I +I ++ Y +N + T H E+ + ++R+ Sbjct: 71 HFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHGDETLRAHGIEV-ECVDDERA 122 Query: 138 RQIIQDFFKER 148 Q+ QDFFK + Sbjct: 123 SQLYQDFFKAK 133 >gi|320531168|ref|ZP_08032158.1| guanine deaminase family protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320136617|gb|EFW28575.1| guanine deaminase family protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 157 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 1/73 (1%) Query: 24 IPVGAVAVLNNKIISRAG-NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 +P V V ++IS G NR +E D +AHAEI AIR + L + T EP Sbjct: 25 LPFVGVIVDGQQVISEFGVNRVQETGDPSAHAEITAIRDALTSSGRTDLRGTTILATGEP 84 Query: 83 CTMCAAAISLARI 95 C MC ARI Sbjct: 85 CGMCYRHAVNARI 97 >gi|195487415|ref|XP_002091899.1| GE11982 [Drosophila yakuba] gi|194178000|gb|EDW91611.1| GE11982 [Drosophila yakuba] Length = 360 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134 D+Y+ EPC MC+ A+ +R +R+++ N G + Q +++ +H E++ +E Sbjct: 296 DVYLLQEPCLMCSMALVHSRAKRVFF-VKNSDNGALATRFQLHSVRELNHHYEVFQFTTE 354 Query: 135 Q 135 + Sbjct: 355 E 355 >gi|260185721|ref|ZP_05763195.1| deaminase [Mycobacterium tuberculosis CPHL_A] gi|289446393|ref|ZP_06436137.1| deaminase [Mycobacterium tuberculosis CPHL_A] gi|289419351|gb|EFD16552.1| deaminase [Mycobacterium tuberculosis CPHL_A] Length = 140 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 24/48 (50%) Query: 43 RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90 R + D TAHAE LAIR C L E L L V PC MC ++ Sbjct: 10 RWAQTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSL 57 >gi|190349179|gb|EDK41782.2| hypothetical protein PGUG_05880 [Meyerozyma guilliermondii ATCC 6260] Length = 365 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 18/65 (27%), Positives = 34/65 (52%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 +Y + EPC MC A+ +RI ++ Y P GG+E+ Q + + +I+ I E+ Sbjct: 287 VYTSHEPCIMCCMALVHSRISKITYIKPVPSTGGLESHYQLGDRPSLNWRFKIWKWIGEE 346 Query: 136 RSRQI 140 +++ Sbjct: 347 EMQKL 351 >gi|189464287|ref|ZP_03013072.1| hypothetical protein BACINT_00628 [Bacteroides intestinalis DSM 17393] gi|189438077|gb|EDV07062.1| hypothetical protein BACINT_00628 [Bacteroides intestinalis DSM 17393] Length = 345 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 63/148 (42%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ++ AQN N P VGAV V + KII ++ AHAE+ AIR Sbjct: 6 YMRRCIQLAQNG-FCNAAPNPMVGAVIVCDGKIIGEG----YHVRCGEAHAEVNAIR--- 57 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + +L +YV+LEPC+ CA I +I R+ G +P G Q Sbjct: 58 SVKDTSLLKRSTIYVSLEPCSHHGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGRGIQKL 117 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ E R +I+ F Sbjct: 118 KDA----GREVTVGVLENECRHLIRRFI 141 >gi|253681051|ref|ZP_04861854.1| riboflavin biosynthesis protein RibD [Clostridium botulinum D str. 1873] gi|253562900|gb|EES92346.1| riboflavin biosynthesis protein RibD [Clostridium botulinum D str. 1873] Length = 372 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 19/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGA+ V +NKII G R ++ HAEI A++ ++E + +YVTLEPC+ Sbjct: 26 VGAIIVKDNKIIGE-GYHKRFGEN---HAEINALKN-----AKEDVSGATMYVTLEPCSH 76 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C AI + I+++ G S+P GT+ + E+ GI ++ ++ Sbjct: 77 YGKTPPCVNAIIKSGIKKVIIGMSDPNPLVAGRGTRILK----DNGIEVVEGILKEEVKK 132 Query: 140 IIQDFFK 146 + + F K Sbjct: 133 VNEIFIK 139 >gi|93279919|pdb|2G84|A Chain A, Cytidine And Deoxycytidylate Deaminase Zinc-Binding Region From Nitrosomonas Europaea. gi|93279920|pdb|2G84|B Chain B, Cytidine And Deoxycytidylate Deaminase Zinc-Binding Region From Nitrosomonas Europaea Length = 197 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 17/119 (14%) Query: 36 IISRAGNRNRELKDVTAHAEILAI-----RMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90 +I+ NR + AHAEILA+ ++ LS + LP +L + EPC MC A+ Sbjct: 62 LIAAGTNRVVPGRCSAAHAEILALSLAQAKLDTHDLSADGLPACELVTSAEPCVMCFGAV 121 Query: 91 SLARIRRLYYGA--SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + +R L A + + G + G + PE + G E R + ++ Sbjct: 122 IWSGVRSLVCAARSDDVEAIGFDEGPR----------PENWMGGLEARGITVTTGLLRD 170 >gi|93006874|ref|YP_581311.1| CMP/dCMP deaminase, zinc-binding [Psychrobacter cryohalolentis K5] gi|92394552|gb|ABE75827.1| CMP/dCMP deaminase, zinc-binding [Psychrobacter cryohalolentis K5] Length = 165 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 2/97 (2%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 ++E A A + P G+V V + +++ NR + D T H EI ++ + ++ E Sbjct: 18 SIELATEALEAGDEPFGSVLVAGDGQVLHEDRNRANSV-DATYHPEIAVVQWAAKHMTAE 76 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 + +Y + E C MC+AA + + + R+ Y +S+ + Sbjct: 77 ARAQAVVYTSGEHCAMCSAAHAWSGLGRIVYVSSSKQ 113 >gi|260172134|ref|ZP_05758546.1| riboflavin biosynthesis protein ribD [Bacteroides sp. D2] gi|315920443|ref|ZP_07916683.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313694318|gb|EFS31153.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 351 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 21/147 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M +E A+N L N P VGAV V N +II + ++ AHAE+ AIR Sbjct: 12 YMRRCIELAKNG-LCNVPPNPMVGAVIVCNGRIIGEGYH----IRCGEAHAEVNAIR--- 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + +L +YV+LEPC+ CA I +I R+ G +P G Q Sbjct: 64 SVKDESLLKHSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGRGIQKL 123 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ + +I+ F Sbjct: 124 RDA----GREVIVGVLEEECQSLIRRF 146 >gi|218752491|ref|ZP_03531287.1| deaminase [Mycobacterium tuberculosis GM 1503] gi|254549800|ref|ZP_05140247.1| deaminase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 210 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 24/48 (50%) Query: 43 RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90 R + D TAHAE LAIR C L E L L V PC MC ++ Sbjct: 80 RWAQTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSL 127 >gi|215444965|ref|ZP_03431717.1| deaminase [Mycobacterium tuberculosis T85] Length = 215 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 24/48 (50%) Query: 43 RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90 R + D TAHAE LAIR C L E L L V PC MC ++ Sbjct: 85 RWAQTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSL 132 >gi|291334222|gb|ADD93888.1| predicted diaminohydroxyphosphoribosylaminopyrimidine deaminase [uncultured marine bacterium MedDCM-OCT-S08-C1463] Length = 348 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 13/98 (13%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV---DLYVTL 80 + VG V V N+II R K +HAEI AI + L ++ DL+VTL Sbjct: 25 VKVGCVIVKENRIIGRGFYE----KYGGSHAEINAINDVKEKYKKNYLSKLSGSDLFVTL 80 Query: 81 EPCT------MCAAAISLARIRRLYYGASNPKGGGIEN 112 EPC+ C + +R+ G +P GI N Sbjct: 81 EPCSKKGKTGACVNELKKYDFKRIVVGTKDPTQNGINN 118 >gi|190575897|ref|YP_001973742.1| putative deaminase [Stenotrophomonas maltophilia K279a] gi|190013819|emb|CAQ47457.1| putative deaminase [Stenotrophomonas maltophilia K279a] Length = 150 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 8/120 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A+ EA+ +P+GA N+ +++ NR + D + H E A R R Sbjct: 10 LLQTAIAEARQGLAEGGVPIGAALYHNDGRLLGCGHNRRVQEGDPSVHGETDAFRKAGR- 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLAT 121 Q + + TL PC C+ + I + G S GGI ENG L + Sbjct: 69 --QRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESRTFQGGIDWLRENGVNVIDLDS 126 >gi|30248078|ref|NP_840148.1| cytidine and deoxycytidylate deaminase zinc-binding region [Nitrosomonas europaea ATCC 19718] gi|30179963|emb|CAD83958.1| Cytidine and deoxycytidylate deaminase zinc-binding region [Nitrosomonas europaea ATCC 19718] Length = 193 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 17/119 (14%) Query: 36 IISRAGNRNRELKDVTAHAEILAI-----RMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90 +I+ NR + AHAEILA+ ++ LS + LP +L + EPC MC A+ Sbjct: 60 LIAAGTNRVVPGRCSAAHAEILALSLAQAKLDTHDLSADGLPACELVTSAEPCVMCFGAV 119 Query: 91 SLARIRRLYYGA--SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + +R L A + + G + G + PE + G E R + ++ Sbjct: 120 IWSGVRSLVCAARSDDVEAIGFDEGPR----------PENWMGGLEARGITVTTGLLRD 168 >gi|228940450|ref|ZP_04103019.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228979928|ref|ZP_04140248.1| Riboflavin biosynthesis protein [Bacillus thuringiensis Bt407] gi|228779807|gb|EEM28054.1| Riboflavin biosynthesis protein [Bacillus thuringiensis Bt407] gi|228819215|gb|EEM65271.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 348 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 19/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +N+I+ + +K HAEI AIRM + E +YVTLEPC+ Sbjct: 11 VGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-----AGEQARGATIYVTLEPCSH 61 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA AI A I+++ +P G + A E+ G+ E+ S++ Sbjct: 62 YGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGI----EVLVGVCEEESKK 117 Query: 140 IIQDFFK 146 + + F K Sbjct: 118 MNEVFNK 124 >gi|241949383|ref|XP_002417414.1| tRNA-specific adenosine deaminase 3, putative; tRNA-specific adenosine-34 deaminase subunit, putative [Candida dubliniensis CD36] gi|223640752|emb|CAX45066.1| tRNA-specific adenosine deaminase 3, putative [Candida dubliniensis CD36] Length = 327 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 23/41 (56%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 +Y T EPC MCA A+ +RI R+ Y GG+E+ Q Sbjct: 250 VYTTHEPCVMCAMALVHSRIGRIIYLKPEKSSGGLESHYQL 290 >gi|148264237|ref|YP_001230943.1| riboflavin biosynthesis protein RibD [Geobacter uraniireducens Rf4] gi|146397737|gb|ABQ26370.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Geobacter uraniireducens Rf4] Length = 368 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 15/86 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V + ++ ++ K T HAE+ A+R + E+ D+YVTLEPC Sbjct: 29 VGCVIVKDGAVVGEGWHK----KAGTPHAEVHALRQ-----AGEMARGADVYVTLEPCAH 79 Query: 86 ------CAAAISLARIRRLYYGASNP 105 CA A+ A++ R++ G +P Sbjct: 80 FGKTPPCADALIAAKVCRVHIGMVDP 105 >gi|52841411|ref|YP_095210.1| riboflavin biosynthesis protein RibD [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628522|gb|AAU27263.1| riboflavin biosynthesis protein RibD [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 357 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 34/81 (41%), Positives = 41/81 (50%), Gaps = 15/81 (18%) Query: 7 FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 F+ ALE+A+ VGAVAV N II++A +R T HAE L Sbjct: 5 FLLAALEQAKLGRGFCAPNPSVGAVAVQNGNIIAQAWHRGAG----TPHAEQL------- 53 Query: 65 ILSQ--EILPEVDLYVTLEPC 83 +LSQ P V LYVTLEPC Sbjct: 54 LLSQIPPQTPGVTLYVTLEPC 74 >gi|254521581|ref|ZP_05133636.1| cytosine deaminase [Stenotrophomonas sp. SKA14] gi|219719172|gb|EED37697.1| cytosine deaminase [Stenotrophomonas sp. SKA14] Length = 150 Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 8/120 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A+ EA+ +P+GA N+ +++ NR + D + H E A R R Sbjct: 10 LLQTAIAEARQGLAEGGVPIGAALYHNDGRLLGCGHNRRVQEGDPSVHGETDAFRKAGR- 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLAT 121 Q + + TL PC C+ + I + G S GGI ENG L + Sbjct: 69 --QRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESRTFQGGIAWLRENGVNVIDLDS 126 >gi|195379983|ref|XP_002048750.1| GJ21218 [Drosophila virilis] gi|194143547|gb|EDW59943.1| GJ21218 [Drosophila virilis] Length = 358 Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust. Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 D+Y+ EPC MCA A+ +R++R+++ G + Q +++ +H E++ Sbjct: 301 DVYLLREPCLMCAMALVHSRVKRIFF-LEQSDDGALATSFQLHSVKELNHHYEVF 354 >gi|323720752|gb|EGB29824.1| deaminase [Mycobacterium tuberculosis CDC1551A] Length = 159 Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 24/48 (50%) Query: 43 RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90 R + D TAHAE LAIR C L E L L V PC MC ++ Sbjct: 29 RWAQTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSL 76 >gi|302751598|gb|ADL65775.1| bifunctional pyrimidine reductase / riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus str. JKD6008] Length = 343 Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 24/131 (18%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 PVGAV V +I+ + L+ HAE+ A+ M +Q+ +Y+TLEPC+ Sbjct: 20 PVGAVIVKEGRIVGIGAH----LRKGDKHAEVQALDM-----AQQNAEGATIYITLEPCS 70 Query: 85 M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-HSPEIYPGISEQRS 137 C I +I ++ Y +N + T H E+ + ++R+ Sbjct: 71 HFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHGDETLRAHGIEV-ECVDDERA 122 Query: 138 RQIIQDFFKER 148 Q+ QDFFK + Sbjct: 123 SQLYQDFFKAK 133 >gi|195584645|ref|XP_002082115.1| GD11395 [Drosophila simulans] gi|194194124|gb|EDX07700.1| GD11395 [Drosophila simulans] Length = 360 Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 12/104 (11%) Query: 31 VLNN---KIISRAGNRNRELKDVTAH--AEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 ++NN K ++ ++RE K+V A A+ LA + G + + D+Y+ EPC M Sbjct: 253 LMNNEDYKDLTFGAEKSRECKEVNADQGADNLA-KFGPYLCTG-----YDIYLLQEPCLM 306 Query: 86 CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 C+ A+ +R +R+++ N G + Q +++ +H E++ Sbjct: 307 CSMALVHSRAKRVFF-VKNSDNGALATRFQLHSVRELNHHYEVF 349 >gi|145500018|ref|XP_001435993.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124403130|emb|CAK68596.1| unnamed protein product [Paramecium tetraurelia] Length = 256 Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 SQ E+ L EPC MCA A+ +RI +YY GG+ + Q + +H Sbjct: 191 SQYYAREMTLVTYFEPCIMCAMALIHSRINEVYYYQKRVTDGGLNDQLQVNNMKQLNHK 249 >gi|329964682|ref|ZP_08301736.1| riboflavin biosynthesis protein RibD [Bacteroides fluxus YIT 12057] gi|328525082|gb|EGF52134.1| riboflavin biosynthesis protein RibD [Bacteroides fluxus YIT 12057] Length = 349 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ++ AQN L N P VGAV V + KII ++ AHAE+ AIR Sbjct: 7 YMRRCIQLAQNG-LCNAAPNPMVGAVIVCDGKIIGEG----YHIRCGEAHAEVNAIR--- 58 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + +L + +YV+LEPC+ CA I +I R+ G +P G Q Sbjct: 59 SVKEPALLKKSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCRDPFSKVAGRGIQKL 118 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ E+ + +I+ F Sbjct: 119 KDA----GREVIVGVLEEECKSLIRRFI 142 >gi|209809706|ref|YP_002265245.1| putative cytidine and deoxycytidylate deaminase [Aliivibrio salmonicida LFI1238] gi|21311445|gb|AAM46726.1|AF452135_11 RibG [Aliivibrio salmonicida] gi|208011269|emb|CAQ81710.1| putative cytidine and deoxycytidylate deaminase [Aliivibrio salmonicida LFI1238] Length = 147 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 18/87 (20%) Query: 26 VGAVAVLNNKIIS------------RAGNRNRELKDV-TAHAEILAIRMGCRILSQEILP 72 VGAV +N+I+S A +RELK + T HAE AI + ++ L Sbjct: 27 VGAVITKHNRIVSVGFNGYPHGVSDSADTDDRELKYLKTLHAEENAI-----LFAKRDLE 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLY 99 + D++VT PC CAA I I ++Y Sbjct: 82 DCDIWVTHFPCPNCAAKIIQTGISKVY 108 >gi|325000060|ref|ZP_08121172.1| cytosine/adenosine deaminase [Pseudonocardia sp. P1] Length = 158 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 2/104 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIR 60 ++ V + +E A+ A + P G+V V + ++ RA +RNR D T H E R Sbjct: 3 EQDRVHLRRCVELAEQALGAGDEPFGSVLVDASGVV-RAEDRNRVAGGDPTRHPEFELAR 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +L+ +Y + E C MCAAA + + R+ Y +S Sbjct: 62 RATELLTPGERAGATVYTSGEHCPMCAAAHAWVGLGRIVYASST 105 >gi|260889069|ref|ZP_05900332.1| riboflavin biosynthesis protein RibD [Leptotrichia hofstadii F0254] gi|260861129|gb|EEX75629.1| riboflavin biosynthesis protein RibD [Leptotrichia hofstadii F0254] Length = 371 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 18/148 (12%) Query: 7 FMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A+E A+ A N P VGAV V K+I ++ HAE+ A+ + Sbjct: 9 YMRMAIELAKKGAGPVNPNPMVGAVVVQGGKVIGTGYHKYFG----EPHAEVYALDEASK 64 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + + L + +YVTLEPC+ CA I ++R G+S+P G Q Sbjct: 65 --NSKDLSDATIYVTLEPCSHYGKTPPCAEKIVKLGLKRCVIGSSDPNPKVAGKGIQILK 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ I ++ +I Q FFK Sbjct: 123 NAGI----EVTENILKEECDKINQVFFK 146 >gi|330504323|ref|YP_004381192.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina NK-01] gi|328918609|gb|AEB59440.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina NK-01] Length = 184 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 5/42 (11%) Query: 72 PEVD-----LYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 P+VD LYV+LEPC MC I LA I R+ Y A + GG Sbjct: 84 PQVDRRGLTLYVSLEPCLMCYGRILLAGITRVRYLARDRDGG 125 >gi|297538271|ref|YP_003674040.1| riboflavin biosynthesis protein RibD [Methylotenera sp. 301] gi|297257618|gb|ADI29463.1| riboflavin biosynthesis protein RibD [Methylotenera sp. 301] Length = 370 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 63/151 (41%), Gaps = 25/151 (16%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR- 60 + +M+ AL A+ L P VG V V NN+I+ + + LK HAE+ A+R Sbjct: 7 HTYMTLALRLAERG-LYTTQPNPRVGCVIVKNNQIVGQGAH----LKAGEPHAEVFALRE 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 G D YVTLEPC C A+ AR++R+ +P NG Sbjct: 62 AGANAEG------ADAYVTLEPCNHHGRTPPCVDALINARVKRVVVAMQDPNPLVAGNGI 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + H E+ G+ E S+ + F Sbjct: 116 KRLQA----HGIEVEVGLMEAESKSLNLGFI 142 >gi|257467357|ref|ZP_05631668.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Fusobacterium gonidiaformans ATCC 25563] gi|315918487|ref|ZP_07914727.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium gonidiaformans ATCC 25563] gi|313692362|gb|EFS29197.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium gonidiaformans ATCC 25563] Length = 359 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 19/113 (16%) Query: 7 FMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M ALE A++ R N P VGAV V N KII + + HAE+ A++ Sbjct: 6 YMHLALELAKHGEGRVNPNPLVGAVVVKNGKIIGKGYHHEYG----GPHAEVFALQE--- 58 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRR--LYYGASNPKGGG 109 + E +YVTLEPC+ CA I + I+R + G NP GG Sbjct: 59 --AGEEAKGATIYVTLEPCSHYGKTPPCAKKIIDSGIKRCVISMGDPNPLVGG 109 >gi|149179738|ref|ZP_01858243.1| riboflavin biosynthesis protein RibD [Bacillus sp. SG-1] gi|148851930|gb|EDL66075.1| riboflavin biosynthesis protein RibD [Bacillus sp. SG-1] Length = 363 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 19/126 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V + +I+ + LK HAE+ AIR D+YVTLEPC Sbjct: 27 VGAVVVKDGEIVGMGAH----LKAGDPHAEVHAIRQAGSKAEG-----ADIYVTLEPCAH 77 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I +++R++ + +P G A E+ GI E+ + + Sbjct: 78 TGKTPPCANLIVENKLKRVFIASVDPNPLVAGKGIDILERAGI----EVVTGICEKEALE 133 Query: 140 IIQDFF 145 + FF Sbjct: 134 LNAHFF 139 >gi|156096476|ref|XP_001614272.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148803146|gb|EDL44545.1| hypothetical protein, conserved [Plasmodium vivax] Length = 245 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 34/71 (47%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 + VT EPC MC A+ L I+ +Y+ N + GG + + + I G + Sbjct: 159 IVVTCEPCIMCVYALKLMGIKDIYFCCLNERFGGCGSVLSLHKTYQDINVNYIKTGGCTE 218 Query: 136 RSRQIIQDFFK 146 RS ++Q F+K Sbjct: 219 RSISLMQSFYK 229 >gi|189425488|ref|YP_001952665.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ] gi|189421747|gb|ACD96145.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ] Length = 194 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 3/91 (3%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 A E A+ A + P GAV V + N L D HAE + R + Sbjct: 51 ANEAAKEAMKSDHPPFGAVLVAPDGETVLMKQGNVSLMD---HAETVIARQAFVKYDPDY 107 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 L + L +EPC MCA I A I + YG Sbjct: 108 LWKCTLVTNVEPCAMCAGNIYWANIGNVVYG 138 >gi|317474402|ref|ZP_07933676.1| riboflavin biosynthesis protein RibD [Bacteroides eggerthii 1_2_48FAA] gi|316909083|gb|EFV30763.1| riboflavin biosynthesis protein RibD [Bacteroides eggerthii 1_2_48FAA] Length = 347 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 21/147 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ++ AQN L N P VGAV V + KII ++ AHAE+ AIR Sbjct: 6 YMRRCIQLAQNG-LCNTAPNPMVGAVIVCDGKIIGEG----YHIRCGEAHAEVNAIR--- 57 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + +L +YV+LEPC CA I +I R+ G +P G Q Sbjct: 58 SVKEPSLLKRSTIYVSLEPCAHYGKTPPCADLIIEKQIPRIVIGCQDPFAKVAGRGIQKL 117 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ + +I+ F Sbjct: 118 KDA----GREVIVGVLEEDCKNLIRRF 140 >gi|304440657|ref|ZP_07400541.1| riboflavin biosynthesis protein RibD [Peptoniphilus duerdenii ATCC BAA-1640] gi|304370844|gb|EFM24466.1| riboflavin biosynthesis protein RibD [Peptoniphilus duerdenii ATCC BAA-1640] Length = 368 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 42/117 (35%), Positives = 52/117 (44%), Gaps = 18/117 (15%) Query: 7 FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FMS A+E A+N A + VG V V N KII ++ + HAE+ AI Sbjct: 9 FMSRAIELAKNGIGATKTNPLVGCVIVRNEKIIGEGYHKVFG----SCHAEVNAINDAK- 63 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111 E L LYV LEPC+ CA I RI R+ G +P G GIE Sbjct: 64 -AKGENLDGATLYVNLEPCSHYGKTPPCADRIIEERITRVVIGNCDPFEKVSGRGIE 119 >gi|45199011|ref|NP_986040.1| AFR493Cp [Ashbya gossypii ATCC 10895] gi|44985086|gb|AAS53864.1| AFR493Cp [Ashbya gossypii ATCC 10895] Length = 324 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 7/55 (12%) Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI--ENGTQFYTLATCHHS 125 + D+Y T EPC+MCA A+ +RI+R + P+ G + E+G + C HS Sbjct: 246 DFDVYTTHEPCSMCAMALIHSRIKRCIFIQPMPETGALRPESGDGY-----CMHS 295 >gi|255020757|ref|ZP_05292816.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Acidithiobacillus caldus ATCC 51756] gi|254969819|gb|EET27322.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Acidithiobacillus caldus ATCC 51756] Length = 369 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 19/95 (20%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VGAV V + +I+ R + L+ AHAE+ A+ + E LYVTLEPC Sbjct: 21 VGAVVVRDGQIVGRGAH----LRAGDAHAEVFALAQ-----AGERARGATLYVTLEPCCH 71 Query: 84 ----TMCAAAISLARIRRLYYGASNP----KGGGI 110 C AI A + R+ ++P +GGGI Sbjct: 72 HGRTPPCTDAILTAGVARVVIAIADPNPRVRGGGI 106 >gi|253732422|ref|ZP_04866587.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253723812|gb|EES92541.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 357 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 24/150 (16%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ A + + PVGAV V +I+ + L+ HAE+ A+ M Sbjct: 14 FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 66 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +Q+ +Y+TLEPC+ C I +I ++ Y +N + Sbjct: 67 --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKITKVVYATK-------DNSLDTHG 117 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148 T + ++R+ Q+ QDFFK + Sbjct: 118 DETLRAQGIEVECVDDERALQLYQDFFKAK 147 >gi|282883344|ref|ZP_06291938.1| riboflavin biosynthesis protein RibD [Peptoniphilus lacrimalis 315-B] gi|281296848|gb|EFA89350.1| riboflavin biosynthesis protein RibD [Peptoniphilus lacrimalis 315-B] Length = 372 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 28/152 (18%) Query: 7 FMSCAL---EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +MS A+ E+ + L N + VG V V +++II R +++ D+ HAE +AI Sbjct: 10 YMSLAMDLAEKGKGFTLTNPM-VGCVIVNDDRIIGRG--YHKKFGDL--HAETMAIEDAQ 64 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIENG 113 + + E L LYV LEPC C AI +I+++ +P G GI+ Sbjct: 65 K--NGESLEGSTLYVNLEPCCHYGKQPPCTKAIIENKIKKVVIANVDPNKKVSGKGIK-- 120 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 TL E+ GI E+ ++ ++FF Sbjct: 121 ----TLEDA--GIEVVEGIMEEEGLKLNEEFF 146 >gi|66824069|ref|XP_645389.1| hypothetical protein DDB_G0272030 [Dictyostelium discoideum AX4] gi|60473505|gb|EAL71449.1| hypothetical protein DDB_G0272030 [Dictyostelium discoideum AX4] Length = 225 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Query: 53 HAEILAIRMGCRILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGA 102 H E+ AI M C + Q+ E LY T EPC MC+AAI + +++ + + Sbjct: 95 HGEVKAI-MNCTTMYQQATWEDYSLYTTGEPCPMCSAAIMWTKFQKVIFAS 144 >gi|118468256|ref|YP_888948.1| cytosine deaminase [Mycobacterium smegmatis str. MC2 155] gi|118169543|gb|ABK70439.1| cytosine deaminase [Mycobacterium smegmatis str. MC2 155] Length = 146 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 4/106 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A+EEA+ IP+GA + +++ NR + D + HAE A R R Sbjct: 6 MLDVAVEEARKGLSEGGIPIGAALFSADGELLGSGHNRRVQDGDPSIHAETDAFRAAGR- 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 Q + + TL PC C+ + I L G + GG E Sbjct: 65 --QRGYRKTIMVTTLSPCWYCSGLVRQFNIGALVIGEARTFSGGHE 108 >gi|19922544|ref|NP_611345.1| CG10927 [Drosophila melanogaster] gi|7302591|gb|AAF57672.1| CG10927 [Drosophila melanogaster] gi|17862074|gb|AAL39514.1| LD07624p [Drosophila melanogaster] gi|220942946|gb|ACL84016.1| CG10927-PA [synthetic construct] gi|220953166|gb|ACL89126.1| CG10927-PA [synthetic construct] Length = 360 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 D+Y+ EPC MC+ A+ +R +R+++ N + G + Q +++ +H E++ Sbjct: 296 DIYLLQEPCLMCSMALVHSRAKRVFF-VKNSENGALATRFQLHSVRELNHHYEVF 349 >gi|195027988|ref|XP_001986864.1| GH20299 [Drosophila grimshawi] gi|193902864|gb|EDW01731.1| GH20299 [Drosophila grimshawi] Length = 356 Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust. Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 D+Y+ EPC MCA A+ +R+RR+++ + + G + + Q + + +H E++ Sbjct: 298 DVYLLREPCLMCAMALVHSRVRRIFFLELS-RNGALASTFQLHAVKELNHHYEVF 351 >gi|218131999|ref|ZP_03460803.1| hypothetical protein BACEGG_03622 [Bacteroides eggerthii DSM 20697] gi|217985875|gb|EEC52215.1| hypothetical protein BACEGG_03622 [Bacteroides eggerthii DSM 20697] Length = 347 Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 21/147 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ++ AQN L N P VGAV V + KII ++ AHAE+ AIR Sbjct: 6 YMRRCIQLAQNG-LCNTAPNPMVGAVIVCDGKIIGEG----YHIRCGEAHAEVNAIR--- 57 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + +L +YV+LEPC CA I +I R+ G +P G Q Sbjct: 58 SVKEPSLLKRSTIYVSLEPCAHYGKTPPCADLIIEKQIPRIVIGCQDPFAKVAGRGIQKL 117 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ + +I+ F Sbjct: 118 KDA----GREVIVGVLEEDCKNLIRRF 140 >gi|222085898|ref|YP_002544429.1| deoxycytidylate deaminase family protein [Agrobacterium radiobacter K84] gi|221723346|gb|ACM26502.1| deoxycytidylate deaminase family protein [Agrobacterium radiobacter K84] Length = 195 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 31/61 (50%) Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 N EL++ H E+ A++ + + ++ T EPCTMC +AI+ A YY S Sbjct: 51 NNELENPLWHGEVHALKRFYELGDRPATKDLIFLSTHEPCTMCMSAITWAGFDNFYYFFS 110 Query: 104 N 104 + Sbjct: 111 H 111 >gi|108805629|ref|YP_645566.1| CMP/dCMP deaminase [Rubrobacter xylanophilus DSM 9941] gi|108766872|gb|ABG05754.1| CMP/dCMP deaminase, zinc-binding protein [Rubrobacter xylanophilus DSM 9941] Length = 194 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 5/59 (8%) Query: 51 TAHAEILAIRMGCRILSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 AHAE++AI + R L L P L+ + EPC MC A + + +R L GA + Sbjct: 78 VAHAEVVAIMVAQRSLGHFDLGGPGMPRYQLFASTEPCAMCFGATTWSGVRSLVCGARD 136 >gi|77413098|ref|ZP_00789299.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae 515] gi|77160891|gb|EAO72001.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae 515] Length = 369 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 17/113 (15%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K +M+ AL+EA+ + VGAV V +++IIS+ ++ D+ HAE A Sbjct: 1 MMKKEDYMALALKEAEKGMGFVAPNPLVGAVIVKDDRIISKG--YHKRFGDL--HAERQA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 I+ + E + LYVTLEPC C A+ + I+++ G+ +P Sbjct: 57 IKN-----ADEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDP 104 >gi|22536910|ref|NP_687761.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae 2603V/R] gi|76788660|ref|YP_329494.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae A909] gi|77406006|ref|ZP_00783084.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae H36B] gi|22533761|gb|AAM99633.1|AE014225_16 riboflavin biosynthesis protein RibD [Streptococcus agalactiae 2603V/R] gi|76563717|gb|ABA46301.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae A909] gi|77175401|gb|EAO78192.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae H36B] Length = 369 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 17/113 (15%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K +M+ AL+EA+ + VGAV V +++IIS+ ++ D+ HAE A Sbjct: 1 MMKKEDYMALALKEAEKGMGFVAPNPLVGAVIVKDDRIISKG--YHKRFGDL--HAERQA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 I+ + E + LYVTLEPC C A+ + I+++ G+ +P Sbjct: 57 IKN-----ADEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDP 104 >gi|258415855|ref|ZP_05682126.1| riboflavin specific deaminase [Staphylococcus aureus A9763] gi|257839448|gb|EEV63921.1| riboflavin specific deaminase [Staphylococcus aureus A9763] Length = 347 Score = 38.9 bits (89), Expect = 0.27, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 26/151 (17%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ A + + PVGAV V +I+ + L+ HAE+ A+ M Sbjct: 4 FMDYAIQLANMVQGQTGVNPPVGAVVVNEGRIVGIGAH----LRKGDKHAEVQALDM--- 56 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE-NGTQFY 117 +Q+ +Y+TLEPC+ C I +I ++ Y K ++ +G + Sbjct: 57 --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYAT---KDNSLDTHGDE-- 109 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 A H E+ + ++R+ Q+ QDFFK + Sbjct: 110 --ALRAHGIEV-ECVDDERASQLYQDFFKAK 137 >gi|329733229|gb|EGG69566.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus 21193] Length = 347 Score = 38.9 bits (89), Expect = 0.27, Method: Compositional matrix adjust. Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 24/150 (16%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ A + + PVGAV V +I+ + L+ HAE+ A+ M Sbjct: 4 FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 56 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +Q+ +Y+TLEPC+ C I +I ++ Y +N + Sbjct: 57 --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKITKVVYATK-------DNSLDTHG 107 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148 T + ++R+ Q+ QDFFK + Sbjct: 108 DETLRAQGIEVECVDDERALQLYQDFFKAK 137 >gi|299142094|ref|ZP_07035228.1| riboflavin biosynthesis protein RibD [Prevotella oris C735] gi|298576556|gb|EFI48428.1| riboflavin biosynthesis protein RibD [Prevotella oris C735] Length = 122 Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 19/118 (16%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M L+ A+N +N P VGAV V +++II ++ HAE+ A Sbjct: 6 YMKRCLQLAENGR-QNAKPNPMVGAVIVAHDRIIGEG----YHVRCGEGHAEVNAF-ASV 59 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111 R +++LPE +YV+LEPC+ CA I I+R G +P +G GI+ Sbjct: 60 RPEDEKLLPEATIYVSLEPCSHYGKTPPCADLIISKGIKRCVCGCVDPFAKVQGRGIQ 117 >gi|288818291|ref|YP_003432639.1| riboflavin biosynthesis protein [Hydrogenobacter thermophilus TK-6] gi|288787691|dbj|BAI69438.1| riboflavin biosynthesis protein [Hydrogenobacter thermophilus TK-6] gi|308751888|gb|ADO45371.1| riboflavin biosynthesis protein RibD [Hydrogenobacter thermophilus TK-6] Length = 361 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 23/148 (15%) Query: 7 FMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI-RMGC 63 FM ALE A+ L + P VG V V + KII+ + + HAE +A+ + G Sbjct: 9 FMRRALELAKLRKGLTHPNPTVGCVIVKDGKIIAEGYHEKVGM----PHAEAVALEKAGT 64 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + LYVTLEPCT C AI A+++R+ +P G Q Sbjct: 65 QAEGST------LYVTLEPCTHYGRTPPCTDAIIRAKVKRVVIATLDPNPLVSGRGVQKL 118 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 A ++ G+ E +R++ +DFF Sbjct: 119 RDAGI----DVCVGVLEDEARELNEDFF 142 >gi|25010822|ref|NP_735217.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae NEM316] gi|23095201|emb|CAD46411.1| Unknown [Streptococcus agalactiae NEM316] Length = 369 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 17/113 (15%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K +M+ AL+EA+ + VGAV V +++IIS+ ++ D+ HAE A Sbjct: 1 MMKKEDYMALALKEAEKGMGFVAPNPLVGAVIVKDDRIISKG--YHKRFGDL--HAERQA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 I+ + E + LYVTLEPC C A+ + I+++ G+ +P Sbjct: 57 IKN-----ADEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDP 104 >gi|312830146|emb|CBX34988.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus ECT-R 2] Length = 347 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 26/151 (17%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ A + + PVGAV V +I+ + L+ HAE+ A+ M Sbjct: 4 FMDYAIQLANMVQGQTGVNPPVGAVVVNEGRIVGIGAH----LRKGDKHAEVQALDM--- 56 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 Q+ +Y+TLEPC+ C I +I ++ Y +N + Sbjct: 57 --VQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHG 107 Query: 119 LATCH-HSPEIYPGISEQRSRQIIQDFFKER 148 T H E+ + ++R+ Q+ QDFFK + Sbjct: 108 DETLRAHGIEV-ECVDDERASQLYQDFFKAK 137 >gi|229174066|ref|ZP_04301602.1| Riboflavin biosynthesis protein [Bacillus cereus MM3] gi|228609398|gb|EEK66684.1| Riboflavin biosynthesis protein [Bacillus cereus MM3] Length = 350 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 19/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +N+I+ + +K HAEI AIRM + E +YVTLEPC+ Sbjct: 11 VGSVIVNDNRIVGIGAH----MKAGEPHAEIHAIRM-----AGEQARGGTIYVTLEPCSH 61 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA AI A I+++ +P + +G+ L E+ G+ E+ S++ Sbjct: 62 HGRTGPCAEAIVQAGIKKVVVATLDPN--PLVSGSGIKILQDA--GIEVLVGVCEEESKK 117 Query: 140 IIQDFFK 146 + + F K Sbjct: 118 MNEVFNK 124 >gi|3378525|emb|CAA08869.1| riboflavin-specific deaminase [Thermotoga neapolitana] Length = 241 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 51/117 (43%), Gaps = 16/117 (13%) Query: 7 FMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+E A+ R PVGAV V +IIS + L V HAE +AI R Sbjct: 5 FMKRAIELAKKGLGRVNPNPPVGAVVVKEGRIISEGFH---PLFLVGPHAERVAIESAKR 61 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP---KGGGIEN 112 E L L VTLEPC C I + I+++ G +P G G+E Sbjct: 62 --KGEDLTGTTLVVTLEPCDHHGKTPPCTDLIIESGIKKVVIGMRDPNPVSGSGVEK 116 >gi|254495519|ref|ZP_05108443.1| riboflavin biosynthesis protein RibD [Polaribacter sp. MED152] gi|85819875|gb|EAQ41032.1| riboflavin biosynthesis protein RibD [Polaribacter sp. MED152] Length = 337 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 17/96 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V NKII+ N HAE+ AI + + +L E +YVTLEPC+ Sbjct: 17 VGAVIVHQNKIIAEGFTSNYG----GNHAEVNAI---IAVKDKSLLKEATIYVTLEPCSH 69 Query: 86 ------CAAAISLARIRRLYYGASNPK----GGGIE 111 CA I +++++ G + G G+E Sbjct: 70 YGKTPPCADLIIKHKLKKVVIGTLDTNSLVAGKGVE 105 >gi|77410804|ref|ZP_00787162.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae CJB111] gi|77163183|gb|EAO74136.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae CJB111] Length = 369 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 17/113 (15%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K +M+ AL+EA+ + VGAV V +++IIS+ ++ D+ HAE A Sbjct: 1 MMKKEDYMALALKEAEKGMGFVAPNPLVGAVIVKDDRIISKG--YHKRFGDL--HAERQA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 I+ + E + LYVTLEPC C A+ + I+++ G+ +P Sbjct: 57 IKN-----ADEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDP 104 >gi|223043509|ref|ZP_03613554.1| riboflavin biosynthesis protein RibD [Staphylococcus capitis SK14] gi|222442997|gb|EEE49097.1| riboflavin biosynthesis protein RibD [Staphylococcus capitis SK14] Length = 349 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 44/161 (27%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM+ A++ A+ + I PVG+V V + +I+ + LK HAE+ A+ M Sbjct: 4 FMNYAIQLAKMVDGQTGINPPVGSVVVKDGRIVGLGAH----LKKGDKHAEVQALDMAG- 58 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----------KGG 108 E + +YV+LEPCT C I IR++ Y + K Sbjct: 59 ----EDAKDATIYVSLEPCTHHGSTPPCVNKIIEFGIRKVIYAVKDTTLASKGDEILKEA 114 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 GIE QF + + ++ +DFF +R Sbjct: 115 GIEVEFQF-----------------NENAAELYKDFFTAKR 138 >gi|187778552|ref|ZP_02995025.1| hypothetical protein CLOSPO_02147 [Clostridium sporogenes ATCC 15579] gi|187772177|gb|EDU35979.1| hypothetical protein CLOSPO_02147 [Clostridium sporogenes ATCC 15579] Length = 364 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 29/158 (18%) Query: 1 MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ N +M AL+ A+ + N P VGA+ + +NKII ++ HAE+ A Sbjct: 1 MEDYNFYMEKALKLAKKGEGKVNPNPKVGAIVIKDNKIIGEGYHKYFG----GPHAEVYA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108 +R + E +YVTLEPC+ CA AI A I + +P +G Sbjct: 57 LRE-----AGEKAKGATIYVTLEPCSHYGKTPPCAKAIVKAGIAKAVIAMKDPNSLVQGR 111 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 GI+ Q + E+ I E+ S+++ + F K Sbjct: 112 GIDILKQ--------NGIEVVTDIMEKESKELNEVFIK 141 >gi|225685288|gb|EEH23572.1| predicted protein [Paracoccidioides brasiliensis Pb03] Length = 241 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 13/75 (17%) Query: 42 NRNRELKDVTAHAEILAIRMGCRILSQE-------------ILPEVDLYVTLEPCTMCAA 88 N N + + T+H EI AI ++L+ + E+ LY E C+MC + Sbjct: 92 NENSKTGNPTSHGEIAAITNCTKVLTDKSGRFKMTPSQTLNAFQELTLYSNAESCSMCTS 151 Query: 89 AISLARIRRLYYGAS 103 AI A + YG+S Sbjct: 152 AIRWAGFKEYVYGSS 166 >gi|332881258|ref|ZP_08448908.1| riboflavin biosynthesis protein RibD [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680634|gb|EGJ53581.1| riboflavin biosynthesis protein RibD [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 358 Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 17/114 (14%) Query: 1 MKKGNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M +MS ++ A+N A N + VGAV V + KII ++ HAE+ Sbjct: 1 MTTDEKYMSRCIQLARNGFYGAAPNPM-VGAVIVHDGKII----GEGYHVRCGGPHAEVN 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 AIR + + E+L E +YV+LEPC+ CA I I R+ G +P Sbjct: 56 AIRF---VRNPELLKESTIYVSLEPCSHYGKTPPCADLIVEKGIPRVVVGCMDP 106 >gi|319744810|gb|EFV97150.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae ATCC 13813] Length = 369 Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 17/113 (15%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K +M+ AL+EA+ + VGAV V +++IIS+ ++ D+ HAE A Sbjct: 1 MMKKEDYMALALKEAEKGMGFVAPNPLVGAVIVKDDRIISKG--YHKRFGDL--HAERQA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 I+ + E + LYVTLEPC C A+ + I+++ G+ +P Sbjct: 57 IKN-----ADEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDP 104 >gi|293371696|ref|ZP_06618107.1| riboflavin biosynthesis protein RibD [Bacteroides ovatus SD CMC 3f] gi|292633393|gb|EFF51963.1| riboflavin biosynthesis protein RibD [Bacteroides ovatus SD CMC 3f] Length = 351 Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M +E A+N L N P VGAV V + +II + ++ AHAE+ AIR Sbjct: 12 YMKRCIELAKNG-LCNVSPNPMVGAVIVCDGRIIGEGYH----IRCGEAHAEVNAIR--- 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + +L +YV+LEPC+ CA I +I R+ G +P G Q Sbjct: 64 SVKDESLLKHSTIYVSLEPCSHYGKTPPCANLIIEKQIPRIVIGCQDPFSEVAGRGIQKL 123 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ E+ + +I+ F Sbjct: 124 RDA----GREVTVGVLEEECKSLIRRFI 147 >gi|152976519|ref|YP_001376036.1| riboflavin biosynthesis protein RibD [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025271|gb|ABS23041.1| riboflavin biosynthesis protein RibD [Bacillus cytotoxicus NVH 391-98] Length = 370 Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 29/151 (19%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-G 62 +M AL+ AQ+ A + P VGAV V N KI+ + L+ HAE+ A+RM G Sbjct: 6 YMKIALQLAQSTAGQTS-PNPMVGAVVVKNGKIVGMGAH----LRAGEEHAEVHALRMAG 60 Query: 63 CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGA--SNPKGGGIENGT 114 + YVTLEPC+ C + +++R+ SNP G NG Sbjct: 61 AHAKGATV------YVTLEPCSHFGKTPPCCNLLIQKKVKRVVIATLDSNPLVAG--NGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A + + GI E+ +R + + FF Sbjct: 113 KKLEEAGIY----VTTGILEEEARSLNRYFF 139 >gi|195119971|ref|XP_002004502.1| GI19969 [Drosophila mojavensis] gi|193909570|gb|EDW08437.1| GI19969 [Drosophila mojavensis] Length = 358 Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust. Identities = 14/55 (25%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 D+Y+ EPC MC+ A+ +R++R+++ + G + + Q + + +H E++ Sbjct: 301 DVYLLREPCLMCSMALVHSRVKRIFF-LEQSENGALTSKFQLHAVKELNHHYEVF 354 >gi|160896589|ref|YP_001562171.1| CMP/dCMP deaminase [Delftia acidovorans SPH-1] gi|160362173|gb|ABX33786.1| CMP/dCMP deaminase zinc-binding [Delftia acidovorans SPH-1] Length = 174 Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 7/80 (8%) Query: 25 PVGAV--AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 P GA+ A +++ GN D HAE R L + L T EP Sbjct: 43 PFGALLLAPDGETVLAEQGN-----IDTVNHAESTLARTAAANYPGAYLAQCTLVTTFEP 97 Query: 83 CTMCAAAISLARIRRLYYGA 102 C MCA I A I R+ YGA Sbjct: 98 CAMCAGTIYWAGIGRVLYGA 117 >gi|169827319|ref|YP_001697477.1| riboflavin biosynthesis protein ribD [Lysinibacillus sphaericus C3-41] gi|168991807|gb|ACA39347.1| Riboflavin biosynthesis protein ribD [Lysinibacillus sphaericus C3-41] Length = 375 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 65/151 (43%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 K +M AL+ A +A N P VGAV V N+ I+ +R K HAE+ A R Sbjct: 9 KDEKYMQLALDLAASAKGNTNPNPLVGAVIVKNDIIVGTGLHR----KAGEPHAEVHAFR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 M + E LYVTLEPC+ CA + + + R+ +P G Sbjct: 65 M-----AGEHAQNATLYVTLEPCSHFGKTPPCANLVKDSGVSRVVVAMQDPNPTVAGRGI 119 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 Q A + G+ EQ++R++ + F Sbjct: 120 QLLRDAGI----TVEVGVLEQQARRLNERFI 146 >gi|255715123|ref|XP_002553843.1| KLTH0E08448p [Lachancea thermotolerans] gi|238935225|emb|CAR23406.1| KLTH0E08448p [Lachancea thermotolerans] Length = 323 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 25/40 (62%) Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 + D+Y T EPC+MC+ A+ +RI+R Y K G +E+ Sbjct: 245 DFDVYTTHEPCSMCSMALIHSRIKRCIYLTPMNKTGCLES 284 >gi|229191491|ref|ZP_04318474.1| Riboflavin biosynthesis protein [Bacillus cereus ATCC 10876] gi|228591971|gb|EEK49807.1| Riboflavin biosynthesis protein [Bacillus cereus ATCC 10876] Length = 350 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 19/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +N+I+ + +K HAEI AIRM + E +YVTLEPC+ Sbjct: 11 VGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-----AGEQARGGTIYVTLEPCSH 61 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA AI A I+++ +P G + A E+ G+ E+ S++ Sbjct: 62 HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGI----EVLVGVCEEESKK 117 Query: 140 IIQDFFK 146 + + F K Sbjct: 118 MNEVFNK 124 >gi|161830108|ref|YP_001596350.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii RSA 331] gi|161761975|gb|ABX77617.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii RSA 331] Length = 151 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 16/78 (20%) Query: 42 NRNRELKDVTAHAEILAIRMGCRILSQEILPEVD----------------LYVTLEPCTM 85 N + + D TAHAE+ IR R L+ L + +Y + EPC M Sbjct: 20 NHSVDWHDPTAHAEMSVIRKAARELNVTDLGHIRKEDSKLSQPSEWSHCVIYSSAEPCPM 79 Query: 86 CAAAISLARIRRLYYGAS 103 C AAI A I L + A+ Sbjct: 80 CMAAIYWAGIHYLVFSAT 97 >gi|328873326|gb|EGG21693.1| CMP/dCMP deaminase [Dictyostelium fasciculatum] Length = 276 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Query: 25 PVGAVAVLNNKIISRAGNR------NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78 P GA + + I+ N N+ K + H EI AI I + LY Sbjct: 64 PTGAKSFFSALIVDAVTNEEICYGYNQGGKSMIYHGEIQAIMNCTTITGRNSWSGTYLYT 123 Query: 79 TLEPCTMCAAAISLARIRRLYYGAS 103 T E C MC AAI + ++ YG+S Sbjct: 124 TGESCPMCQAAIMWSGFDKVIYGSS 148 >gi|313203842|ref|YP_004042499.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-aminO-6-(5-phosphoribosylamino)uracil reductase [Paludibacter propionicigenes WB4] gi|312443158|gb|ADQ79514.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Paludibacter propionicigenes WB4] Length = 360 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 17/126 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V N+KII G +R + AHAE AI + E+L + LYV+LEPC+ Sbjct: 43 VGAVLVCNDKIIGE-GYHHRYGE---AHAEPNAIN---SVKEVELLGQSTLYVSLEPCSH 95 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I + I R+ G +P G A E+ G+ E+ R+ Sbjct: 96 YGKTPPCADLIVSSGIPRVVIGTLDPNPKVAGKGVAKLRNAGV----EVIVGVLEEECRE 151 Query: 140 IIQDFF 145 + + FF Sbjct: 152 LNKRFF 157 >gi|261749554|ref|YP_003257240.1| riboflavin biosynthesis protein RibD [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497647|gb|ACX84097.1| riboflavin biosynthesis protein RibD [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 347 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 21/130 (16%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M +FM A++ A+N L + P+ + N +I G + D HAE+ AI Sbjct: 1 MNHKKIFMYRAIQLAKNGLGLTSPNPMVGCLIERNGLILSEGWHYKVGMD---HAEVNAI 57 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGG 109 R+ + +L + LYVTLEPC C I ++I R+ G +P G G Sbjct: 58 N---RVENTSLLTDSTLYVTLEPCVHFGKTPPCVDLIIKSKIPRVVIGIQDPCHKVNGLG 114 Query: 110 I----ENGTQ 115 I ENG + Sbjct: 115 IQKLRENGIE 124 >gi|242764976|ref|XP_002340880.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500] gi|218724076|gb|EED23493.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500] Length = 154 Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%) Query: 12 LEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 ++ A+ A + P G++ V +I+ A NR +D+T H E + + LS Sbjct: 14 VDLAREAVDAGDAPFGSILVNAAGEILQEARNRVTTEEDITLHPEFTLVIWAQKHLSPTE 73 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +Y + E C MCA+A + A + R+ Y +S+ Sbjct: 74 RATTTVYTSGEHCPMCASAHAYADLGRIVYVSSS 107 >gi|114705235|ref|ZP_01438143.1| hypothetical protein FP2506_09861 [Fulvimarina pelagi HTCC2506] gi|114540020|gb|EAU43140.1| hypothetical protein FP2506_09861 [Fulvimarina pelagi HTCC2506] Length = 164 Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 40/99 (40%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 V ++ +E A+ A P G+ V N + + D TAH E R Sbjct: 14 VHLARCVELARQAVEEGHKPFGSRLVAGNGTVLKEDYNRTGDGDPTAHPEFALARWAGLN 73 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 + E +Y + E C MCA A + + R+ YG+S Sbjct: 74 MEPSERAEATVYTSGEHCPMCATAHGIVGLGRIVYGSST 112 >gi|319401074|gb|EFV89293.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis FRI909] Length = 347 Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 46/107 (42%), Gaps = 19/107 (17%) Query: 7 FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GC 63 FM A++ AQ N PVG+V V N +I+ + LK HAE+ AI M G Sbjct: 4 FMDDAIQLAQMVNGQTGVNPPVGSVVVKNGRIVGLGAH----LKKGDKHAEVQAIEMAGL 59 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASN 104 I YV+LEPCT C I A I ++ Y + Sbjct: 60 NAQGATI------YVSLEPCTHHGSTPPCVDKIIEAGISKVIYAVKD 100 >gi|331223607|ref|XP_003324476.1| hypothetical protein PGTG_05282 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309303466|gb|EFP80057.1| hypothetical protein PGTG_05282 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 406 Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust. Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 19/94 (20%) Query: 32 LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL----PEVDL----------- 76 ++N I+S + +R + + HA + + + +Q+++ PE L Sbjct: 278 VSNPILSASVDRRKSSSNRLRHA---VVELTTTVSAQDLIHPRSPETALHPIPYLLTNQI 334 Query: 77 -YVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 +++ EPC +C+ A+ +RI+ L++ A +P+ GG Sbjct: 335 VFLSHEPCLLCSMALLHSRIKHLFFLAPSPRSGG 368 >gi|195335637|ref|XP_002034470.1| GM21898 [Drosophila sechellia] gi|194126440|gb|EDW48483.1| GM21898 [Drosophila sechellia] Length = 360 Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust. Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 D+Y+ EPC MC+ A+ +R +R+++ N G + Q +++ +H E++ Sbjct: 296 DIYLLQEPCLMCSMALVHSRAKRVFF-VKNSDNGALATRFQLHSVRELNHHYEVF 349 >gi|126650091|ref|ZP_01722324.1| riboflavin specific deaminase [Bacillus sp. B14905] gi|126593263|gb|EAZ87225.1| riboflavin specific deaminase [Bacillus sp. B14905] Length = 375 Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 65/151 (43%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 K +M AL+ A +A N P VGAV V N+ I+ +R K HAE+ A R Sbjct: 9 KDEKYMQLALDLAASAKGNTNPNPLVGAVIVKNDIIVGTGLHR----KAGEPHAEVHAFR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 M + E LYVTLEPC+ CA + + + R+ +P G Sbjct: 65 M-----AGEHAKNATLYVTLEPCSHFGKTPPCANLVKESGVSRVVVAMQDPNPTVAGRGI 119 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 Q A + G+ EQ++R++ + F Sbjct: 120 QLLRDAGI----AVEVGVLEQQARRLNERFI 146 >gi|228953669|ref|ZP_04115709.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229070840|ref|ZP_04204068.1| Riboflavin biosynthesis protein [Bacillus cereus F65185] gi|229179672|ref|ZP_04307022.1| Riboflavin biosynthesis protein [Bacillus cereus 172560W] gi|228603778|gb|EEK61249.1| Riboflavin biosynthesis protein [Bacillus cereus 172560W] gi|228712230|gb|EEL64177.1| Riboflavin biosynthesis protein [Bacillus cereus F65185] gi|228805903|gb|EEM52482.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 350 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 19/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +N+I+ + +K HAEI AIRM + E +YVTLEPC+ Sbjct: 11 VGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-----AGEQARGGTIYVTLEPCSH 61 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA AI A I+++ +P G + A E+ G+ E+ S++ Sbjct: 62 HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGI----EVLVGVCEEESKK 117 Query: 140 IIQDFFK 146 + + F K Sbjct: 118 MNEVFNK 124 >gi|319900207|ref|YP_004159935.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Bacteroides helcogenes P 36-108] gi|319415238|gb|ADV42349.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Bacteroides helcogenes P 36-108] Length = 347 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 21/147 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ++ AQN L N P VGAV V + KII + AHAE+ AIR Sbjct: 5 YMRRCIQLAQNG-LCNTAPNPMVGAVIVCDGKIIGEG----YHVHCGEAHAEVNAIR--- 56 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + +L +YV+LEPC+ CA I +I R+ G +P G Q Sbjct: 57 SVKDPSLLQRATIYVSLEPCSHYGKTPPCADLIIEKQIPRIIIGCMDPFSKVAGRGIQKL 116 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ + +I+ F Sbjct: 117 KDA----GREVIVGVLEEECKSLIRRF 139 >gi|260223441|emb|CBA34012.1| hypothetical protein Csp_B21900 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 468 Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 7/91 (7%) Query: 15 AQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72 AQ A + P GA+ V +++ GN D HAE R + E L Sbjct: 27 AQRALTLGKHPFGAILVAPDGETVLAEQGN-----VDTVNHAESALARTAATNFTPEYLW 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + L T+EPC MCA A I L +G + Sbjct: 82 DCTLVTTVEPCAMCAGTQYWANIGTLVFGMT 112 >gi|258621774|ref|ZP_05716805.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258626283|ref|ZP_05721130.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258581335|gb|EEW06237.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258586005|gb|EEW10723.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 110 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Query: 46 ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 E D TAHAE+ AIR C+ + L + L + EPC MC + I ++ + A + Sbjct: 2 ENNDPTAHAEVEAIRDACKNTKKPHLRGLTLLASGEPCAMCYLNAMYSGISKVLFAADSN 61 Query: 106 KGG--GIENGTQFYTLATCHHSPEIYP-GISEQRSRQIIQDF 144 + G + + + LA + P +P IS+ ++ ++ F Sbjct: 62 EAAVHGFDYRSTYSMLA---NFPTRWPMQISKHQTEGALEPF 100 >gi|166710521|ref|ZP_02241728.1| cytosine deaminase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 151 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 4/105 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A+ EA+ IP+GA N+ +++ NR + D + H E A R R Sbjct: 10 LLDTAITEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR- 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 Q + + TL PC C+ + I + G S GGI Sbjct: 69 --QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGI 111 >gi|237880781|gb|ACR33039.1| cytosine/adenine deaminase [Actinoplanes garbadinensis] Length = 161 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 2/91 (2%) Query: 15 AQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73 A+ A + P G+V V + K++ NR R D T H E R L+ Sbjct: 18 AREALDDGDEPFGSVLVSADGKVLFEDRNRVRH-GDATQHPEFAISRWAAEHLTPRERAS 76 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +Y + E C MC+A+ R+ R+ Y AS+ Sbjct: 77 ATVYTSGEHCPMCSASHGWVRLGRIVYAASS 107 >gi|306833066|ref|ZP_07466197.1| riboflavin biosynthesis protein RibD [Streptococcus bovis ATCC 700338] gi|304424775|gb|EFM27910.1| riboflavin biosynthesis protein RibD [Streptococcus bovis ATCC 700338] Length = 351 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 17/96 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V N ++I+R + L+ HAE AI + C + E L LYVTLEPC Sbjct: 26 VGAVIVKNGRVIARGAH----LQYGHEHAEKNAI-LHCEV--PEELANSTLYVTLEPCHH 78 Query: 86 ------CAAAISLARIRRLYYGASNPK----GGGIE 111 C AI A I+++ G +P G G+E Sbjct: 79 TGKQPPCTQAIVEAGIKKVVVGQLDPNPLVAGKGLE 114 >gi|66802007|ref|XP_629827.1| hypothetical protein DDB_G0292096 [Dictyostelium discoideum AX4] gi|60463211|gb|EAL61404.1| hypothetical protein DDB_G0292096 [Dictyostelium discoideum AX4] Length = 321 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 29/61 (47%) Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 N ++ +H EI+AI + LY + EPC MC+AA+ A + + +G Sbjct: 98 NTGKPNIISHGEIVAINNCTALHGITSFTNYTLYTSGEPCAMCSAALLWADFKTIVWGTF 157 Query: 104 N 104 N Sbjct: 158 N 158 >gi|299142759|ref|ZP_07035888.1| riboflavin biosynthesis protein RibD [Prevotella oris C735] gi|298575788|gb|EFI47665.1| riboflavin biosynthesis protein RibD [Prevotella oris C735] Length = 116 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 13/96 (13%) Query: 16 QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75 QNA L VGAV V +++II ++ HAE+ A R +++LPE Sbjct: 19 QNAKLNPM--VGAVIVAHDRIIGEG----YHVRCGEGHAEVNAF-ASVRPEDEKLLPEAT 71 Query: 76 LYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 +YV+LEPC+ CA I I+R G +P Sbjct: 72 IYVSLEPCSHYGKTPPCADLIISKGIKRCVCGCVDP 107 >gi|289664006|ref|ZP_06485587.1| cytosine deaminase [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667443|ref|ZP_06488518.1| cytosine deaminase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 151 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 4/105 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A+ EA+ IP+GA N+ +++ NR + D + H E A R R Sbjct: 10 LLDTAITEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR- 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 Q + + TL PC C+ + I + G S GGI Sbjct: 69 --QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGI 111 >gi|171915861|ref|ZP_02931331.1| riboflavin biosynthesis protein RibD [Verrucomicrobium spinosum DSM 4136] Length = 354 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 12/110 (10%) Query: 7 FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL EA+ L + P VGAV V ++I + + + HAE+ A+R Sbjct: 9 WMRLALAEARRGIGLTSPNPAVGAVLVNEGRLIGQGWHH----RVGQPHAEVEALRNAEA 64 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGG 108 + YVTLEPC+ C A++ A + R+ YGA++P G Sbjct: 65 NGHGAEIRGATAYVTLEPCSTHGRTGACTVALAKAGVSRVVYGATDPNPG 114 >gi|78046250|ref|YP_362425.1| putative cytosine deaminase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034680|emb|CAJ22325.1| putative cytosine deaminase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 151 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 4/105 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A+ EA+ IP+GA N+ +++ NR + D + H E A R R Sbjct: 10 LLDTAITEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR- 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 Q + + TL PC C+ + I + G S GGI Sbjct: 69 --QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGI 111 >gi|163847753|ref|YP_001635797.1| riboflavin biosynthesis protein RibD [Chloroflexus aurantiacus J-10-fl] gi|222525619|ref|YP_002570090.1| riboflavin biosynthesis protein RibD [Chloroflexus sp. Y-400-fl] gi|163669042|gb|ABY35408.1| riboflavin biosynthesis protein RibD [Chloroflexus aurantiacus J-10-fl] gi|222449498|gb|ACM53764.1| riboflavin biosynthesis protein RibD [Chloroflexus sp. Y-400-fl] Length = 391 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 15/88 (17%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 PVGAV V + +++ + HAE +A+ DLY TLEPCT Sbjct: 33 PVGAVVVRDGQVVGLGATQPAG----GPHAERIALAAAGERARGA-----DLYTTLEPCT 83 Query: 85 M------CAAAISLARIRRLYYGASNPK 106 C AI A IRR+++ A +P Sbjct: 84 FYGRTPPCTEAIIAAGIRRVFFIAHDPD 111 >gi|325925419|ref|ZP_08186818.1| cytosine/adenosine deaminase [Xanthomonas perforans 91-118] gi|325928766|ref|ZP_08189935.1| cytosine/adenosine deaminase [Xanthomonas perforans 91-118] gi|325540847|gb|EGD12420.1| cytosine/adenosine deaminase [Xanthomonas perforans 91-118] gi|325544179|gb|EGD15563.1| cytosine/adenosine deaminase [Xanthomonas perforans 91-118] Length = 151 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 4/105 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A+ EA+ IP+GA N+ +++ NR + D + H E A R R Sbjct: 10 LLDTAITEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR- 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 Q + + TL PC C+ + I + G S GGI Sbjct: 69 --QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGI 111 >gi|88808247|ref|ZP_01123758.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. WH 7805] gi|88788286|gb|EAR19442.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. WH 7805] Length = 227 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 3/80 (3%) Query: 28 AVAVLNNKIISRA-GNRNRELKDVTAHAEILAIRMGCRILSQE-ILP-EVDLYVTLEPCT 84 A+LN +S + N+E + HAE+ I + Q+ + P +V T EPCT Sbjct: 58 GAAMLNKHDLSTIIADTNQETLNPLFHAEVQTINHYYSMPKQQHVAPGDVLFLATHEPCT 117 Query: 85 MCAAAISLARIRRLYYGASN 104 +C++AI+ A YY S+ Sbjct: 118 LCSSAITWAGFDNFYYFFSH 137 >gi|70726154|ref|YP_253068.1| riboflavin specific deaminase [Staphylococcus haemolyticus JCSC1435] gi|68446878|dbj|BAE04462.1| riboflavin specific deaminase [Staphylococcus haemolyticus JCSC1435] Length = 347 Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 11/80 (13%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ AQ + I PVGAV V N +I+ + LK HAE+ A+ M + Sbjct: 4 FMEYAIQLAQMVKGQTGINPPVGAVVVNNGRIVGLGAH----LKQGEKHAEVQALDMAGK 59 Query: 65 ILSQEILPEVDLYVTLEPCT 84 I+ Y++LEPCT Sbjct: 60 EAKGGII-----YISLEPCT 74 >gi|288904903|ref|YP_003430125.1| riboflavin-specific deaminase [Streptococcus gallolyticus UCN34] gi|288731629|emb|CBI13184.1| riboflavin-specific deaminase [Streptococcus gallolyticus UCN34] Length = 351 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 21/118 (17%) Query: 7 FMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M+ A+ EA+ N + VGAV V N ++I+R + L+ HAE AI + C Sbjct: 5 YMAQAIAEAKKGFRQTYTNPL-VGAVIVKNGRVIARGAH----LQYGHEHAEKNAI-LHC 58 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111 + E L LYVTLEPC C AI A I+++ G +P G G+E Sbjct: 59 E--APEELTNSTLYVTLEPCHHTGKQPPCTQAIVEAGIKKVVVGQLDPNPLVAGKGLE 114 >gi|195431281|ref|XP_002063675.1| GK15805 [Drosophila willistoni] gi|194159760|gb|EDW74661.1| GK15805 [Drosophila willistoni] Length = 352 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134 D+Y+ EPC MC+ A+ +R +R+++ ++ G + Q +T+ +H E++ E Sbjct: 290 DVYLLQEPCLMCSMALVHSRAKRIFFLQTS-DNGALLTRFQLHTVKELNHHYEVFQFTRE 348 Query: 135 Q 135 Q Sbjct: 349 Q 349 >gi|238502305|ref|XP_002382386.1| conserved hypothetical protein [Aspergillus flavus NRRL3357] gi|220691196|gb|EED47544.1| conserved hypothetical protein [Aspergillus flavus NRRL3357] Length = 164 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 26/58 (44%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 HAE R +++ L E T EPC MCA I A I RL Y AS G+ Sbjct: 56 HAEAELARNAADNYARDYLAETTFISTWEPCAMCAGTIYWANIGRLVYLASEKALQGV 113 >gi|9392602|gb|AAF87213.1|AF228578_2 unknown [Rhizobium leguminosarum bv. viciae] Length = 195 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 31/61 (50%) Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 N EL++ H E+ ++ + ++ ++ T EPCTMC +AI+ A YY S Sbjct: 51 NNELENPLWHGEVHTLKRFYELGDKQPTKDLIFLSTHEPCTMCMSAITWAGFDNFYYFFS 110 Query: 104 N 104 + Sbjct: 111 H 111 >gi|327405290|ref|YP_004346128.1| riboflavin biosynthesis protein RibD [Fluviicola taffensis DSM 16823] gi|327320798|gb|AEA45290.1| riboflavin biosynthesis protein RibD [Fluviicola taffensis DSM 16823] Length = 347 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 17/96 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V N +II ++ K AHAE+ A+ + + +L E +YVTLEPC+ Sbjct: 28 VGAVIVHNQQIIGEGYHQ----KYGEAHAEVNAVN---SVKDKSLLSESTIYVTLEPCSH 80 Query: 86 ------CAAAISLARIRRLYYGASNP----KGGGIE 111 CA + ++ +R+ +P G GIE Sbjct: 81 FGKTPPCADLLVHSQFKRVVIAQIDPFSEVAGRGIE 116 >gi|281424669|ref|ZP_06255582.1| riboflavin biosynthesis protein RibD [Prevotella oris F0302] gi|281401039|gb|EFB31870.1| riboflavin biosynthesis protein RibD [Prevotella oris F0302] Length = 318 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 19/118 (16%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M L+ A+N +N P VGAV V +++II + ++ HAE+ A Sbjct: 6 YMKRCLQLAENGR-QNAKPNPMVGAVIVAHDRIIGEGYH----VRCGEGHAEVNAF-ASV 59 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111 R +++LPE +YV+LEPC+ CA I I+R G +P +G GI+ Sbjct: 60 RPEDEKLLPEATIYVSLEPCSHYGKTPPCADLIISKGIKRCVCGCVDPFAKVQGRGIQ 117 >gi|301064689|ref|ZP_07205078.1| riboflavin biosynthesis protein RibD [delta proteobacterium NaphS2] gi|300441231|gb|EFK05607.1| riboflavin biosynthesis protein RibD [delta proteobacterium NaphS2] Length = 369 Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 23/118 (19%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-MGC 63 FM A++EA+ R VGAV V ++++ ++ + HAE+ A R +G Sbjct: 8 FMKLAVKEARKGLGRTSPNPAVGAVIVKEGRVVASGFHKQAGM----PHAEVEAFRKVGN 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111 R P LYVTLEPC C I + ++R+ G +P GGG + Sbjct: 64 RA------PGATLYVTLEPCNHHGKTPPCTELILKSGVKRVVVGMRDPNPLVTGGGCD 115 >gi|282889950|ref|ZP_06298485.1| hypothetical protein pah_c008o037 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500143|gb|EFB42427.1| hypothetical protein pah_c008o037 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 359 Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 19/130 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V KI+ + AHAEI+A+R L YVTLEPC+ Sbjct: 21 VGAVIVKQGKIVGEGFTQ----APGEAHAEIMALRQALHQAENSTL-----YVTLEPCSH 71 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C AI A+I + +P G Q A + G+ +QR+ + Sbjct: 72 FGKTPPCVNAIIQAKIAHVVIALEDPDPQVSGRGIQKLKEAGI----SVTVGVEQQRATE 127 Query: 140 IIQDFFKERR 149 +++ + +R+ Sbjct: 128 LLEPYLFQRK 137 >gi|291454680|ref|ZP_06594070.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291357629|gb|EFE84531.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 163 Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 2/102 (1%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEI 70 +E A A + P G+V V + + RA +RNR D T H E R L+ Sbjct: 14 VELAAQALDAGDEPFGSVLVDGDGTV-RAEDRNRVASGDSTRHPEFALARWAAENLTVAE 72 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 +Y + E C MCAAA + + R+ Y AS+ + G N Sbjct: 73 RAAATVYTSGEHCPMCAAAHAWVGLGRIVYAASSEQLTGWLN 114 >gi|171677037|ref|XP_001903470.1| hypothetical protein [Podospora anserina S mat+] gi|170936586|emb|CAP61245.1| unnamed protein product [Podospora anserina S mat+] Length = 216 Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 22/113 (19%) Query: 12 LEEAQNAALRNEIPVGAVA--VLNNK-------IISRAGNRNRELKDVTAHAEILAIRMG 62 + +A AL + P A ++N+ +I N+N + T H E+ AI Sbjct: 28 IHQANTLALSHPCPFAAFGSVIVNHTTGNPQGTLICTGANQNSRTGNPTLHGEMAAIS-N 86 Query: 63 CRIL------------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 C L S ++ LY E C MCAAA+ A +R YG S Sbjct: 87 CSSLFVSSAYNMTPAESLAAFKQLTLYTNAESCPMCAAAVRWAGLREYIYGVS 139 >gi|325288196|ref|YP_004263986.1| riboflavin biosynthesis protein RibD [Cellulophaga lytica DSM 7489] gi|324323650|gb|ADY31115.1| riboflavin biosynthesis protein RibD [Cellulophaga lytica DSM 7489] Length = 350 Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 19/132 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGA+ V NN II +HAE+ AI I + +L E +YVTLEPC+ Sbjct: 28 VGALIVHNNAIIGEGFTSPYG----GSHAEVNAIN---SIKDKSVLKESTIYVTLEPCSH 80 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I +I + G +P NG + A C+ + G+ E+ R+ Sbjct: 81 YGKTPPCADLIIKHKIPNIVIGLKDPHEKVAGNGIKKLRAAGCN----VTIGVLEEECRE 136 Query: 140 IIQDF--FKERR 149 F F E++ Sbjct: 137 HHNRFLCFYEKK 148 >gi|310827884|ref|YP_003960241.1| riboflavin biosynthesis protein RibD [Eubacterium limosum KIST612] gi|308739618|gb|ADO37278.1| riboflavin biosynthesis protein RibD [Eubacterium limosum KIST612] Length = 367 Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 57/147 (38%), Gaps = 21/147 (14%) Query: 7 FMSCALEEA-QNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M ALEEA + N P VGAV V N +I R + HAE AI Sbjct: 6 YMRLALEEAWKGCGFVNPNPMVGAVIVKNGCVIGRGAHERYG----GPHAERNAIAH--- 58 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 E L + LYVTL PC C + IRR+ G+ +P E + Sbjct: 59 --CTEDLQDATLYVTLTPCCHFGKTPPCTDVVLENGIRRVVIGSHDPNPLVAEKSIEILR 116 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145 H E+ GI +Q + FF Sbjct: 117 ----QHGVEVTTGILQQECDALNDAFF 139 >gi|325920349|ref|ZP_08182285.1| cytosine/adenosine deaminase [Xanthomonas gardneri ATCC 19865] gi|325549169|gb|EGD20087.1| cytosine/adenosine deaminase [Xanthomonas gardneri ATCC 19865] Length = 186 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 5/91 (5%) Query: 17 NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS----QEIL 71 N R+ P GAV +N+II+ A NR AHAE +A + + L ++L Sbjct: 41 NVQERSGGPFGAVVFGPDNRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQTPRLNDVL 100 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 V L + +PC C A A I RL GA Sbjct: 101 SPVTLATSAQPCCQCYGATVWAGIDRLLIGA 131 >gi|332703475|ref|ZP_08423563.1| riboflavin biosynthesis protein RibD [Desulfovibrio africanus str. Walvis Bay] gi|332553624|gb|EGJ50668.1| riboflavin biosynthesis protein RibD [Desulfovibrio africanus str. Walvis Bay] Length = 380 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 14/79 (17%) Query: 75 DLYVTLEPCTM------CAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTLATCHHSP 126 D+YVTLEPC+ C AI A IRR++ G NP G GT++ Sbjct: 71 DMYVTLEPCSHHGKTPPCTEAILEAGIRRVFVGCKDLNPTVPG--RGTEYLL----SKGV 124 Query: 127 EIYPGISEQRSRQIIQDFF 145 ++ GI EQ R I DF Sbjct: 125 QVELGILEQECRDAIADFM 143 >gi|239982837|ref|ZP_04705361.1| hypothetical protein SalbJ_25624 [Streptomyces albus J1074] Length = 166 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 2/102 (1%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEI 70 +E A A + P G+V V + + RA +RNR D T H E R L+ Sbjct: 17 VELAAQALDAGDEPFGSVLVDGDGTV-RAEDRNRVASGDSTRHPEFALARWAAENLTVAE 75 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 +Y + E C MCAAA + + R+ Y AS+ + G N Sbjct: 76 RAAATVYTSGEHCPMCAAAHAWVGLGRIVYAASSEQLTGWLN 117 >gi|227872741|ref|ZP_03991064.1| hypothetical protein HMPREF6123_1003 [Oribacterium sinus F0268] gi|227841402|gb|EEJ51709.1| hypothetical protein HMPREF6123_1003 [Oribacterium sinus F0268] Length = 83 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 19/83 (22%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAV-------------------AVLNNKIISRAG 41 MK +M AL A+ AA R ++P+GA+ +L I+ R Sbjct: 1 MKTEKDYMKMALSLAKKAASRGDVPIGALIVYDGTKPDSPMGRLCQAKGILPGTILGRGY 60 Query: 42 NRNRELKDVTAHAEILAIRMGCR 64 NR + + H EILAI C+ Sbjct: 61 NRRNQKNNALYHGEILAIEKACK 83 >gi|21241410|ref|NP_640992.1| cytosine deaminase [Xanthomonas axonopodis pv. citri str. 306] gi|294625645|ref|ZP_06704268.1| cytosine deaminase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666814|ref|ZP_06732047.1| cytosine deaminase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|21106745|gb|AAM35528.1| cytosine deaminase [Xanthomonas axonopodis pv. citri str. 306] gi|292600068|gb|EFF44182.1| cytosine deaminase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603398|gb|EFF46816.1| cytosine deaminase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 151 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 4/105 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A+ EA+ IP+GA N+ +++ NR + D + H E A R R Sbjct: 10 LLDTAIAEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR- 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 Q + + TL PC C+ + I + G S GGI Sbjct: 69 --QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGI 111 >gi|260886861|ref|ZP_05898124.1| riboflavin biosynthesis protein RibD [Selenomonas sputigena ATCC 35185] gi|330839340|ref|YP_004413920.1| riboflavin biosynthesis protein RibD [Selenomonas sputigena ATCC 35185] gi|260863460|gb|EEX77960.1| riboflavin biosynthesis protein RibD [Selenomonas sputigena ATCC 35185] gi|329747104|gb|AEC00461.1| riboflavin biosynthesis protein RibD [Selenomonas sputigena ATCC 35185] Length = 367 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 23/155 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M++ FM AL A NA R P VGAV V +I+ +R K T HAE+ Sbjct: 1 MQQDEDFMREALLLAANARGRTA-PNPLVGAVIVREGRIVGAGWHR----KAGTPHAEVH 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 A+ M + ++ +YVTLEPC+ CA A+ A ++R+ +P Sbjct: 56 ALAM-----AGDLAHGATVYVTLEPCSHHGRTGPCAEALVKAGVKRVVTAMLDPNPLVAG 110 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G A E+ G+ + +R++ + + K Sbjct: 111 KGKAMLEAAGV----EVTVGVLAEEARRLNEAYLK 141 >gi|225558752|gb|EEH07036.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 197 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 4/66 (6%) Query: 42 NRNRELKDVTAHAEILAIRMGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLARIRR 97 N+ E+ +T +IL + G L+ E E LY E C MCAAAI A + Sbjct: 83 NKTWEIAAITNCTDILTNKHGRFKLTSLEALEAFKEFTLYTNAESCPMCAAAIRWAGFKE 142 Query: 98 LYYGAS 103 YG S Sbjct: 143 YVYGTS 148 >gi|170756114|ref|YP_001782503.1| riboflavin biosynthesis protein RibD [Clostridium botulinum B1 str. Okra] gi|169121326|gb|ACA45162.1| riboflavin biosynthesis protein RibD [Clostridium botulinum B1 str. Okra] Length = 365 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 29/158 (18%) Query: 1 MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ N M AL+ A+ + N P VGA+ V NNKII ++ HAE+ A Sbjct: 1 MEDYNFHMEKALKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFG----GPHAEVYA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108 +R + E +YVTLEPC+ CA +I I + +P +G Sbjct: 57 LRE-----AGEKAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVEGR 111 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 GI+ Q + E+ GI E+ S+++ + F K Sbjct: 112 GIDILKQ--------NGIEVVTGIMEKESKKLNEVFIK 141 >gi|148380824|ref|YP_001255365.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str. ATCC 3502] gi|153933315|ref|YP_001385131.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str. ATCC 19397] gi|153935215|ref|YP_001388600.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str. Hall] gi|148290308|emb|CAL84432.1| riboflavin biosynthesis protein ribd [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Clostridium botulinum A str. ATCC 3502] gi|152929359|gb|ABS34859.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str. ATCC 19397] gi|152931129|gb|ABS36628.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str. Hall] Length = 365 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 29/158 (18%) Query: 1 MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ N +M AL+ A+ + N P VGA+ V NNKII ++ HAE+ A Sbjct: 1 MEDYNFYMEKALKLAERGEGKVNPNPKVGAIVVNNNKIIGEGYHKYFG----GPHAEVYA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108 ++ + E +YVTLEPC+ CA +I I + +P +G Sbjct: 57 LKE-----AGEKAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVEGR 111 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 GI+ Q + E+ GI E+ S+++ + F K Sbjct: 112 GIDILKQ--------NGIEVITGIMEKESKKLNEVFIK 141 >gi|332662070|ref|YP_004444858.1| riboflavin biosynthesis protein RibD [Haliscomenobacter hydrossis DSM 1100] gi|332330884|gb|AEE47985.1| riboflavin biosynthesis protein RibD [Haliscomenobacter hydrossis DSM 1100] Length = 351 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 5/58 (8%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 VGAV V +NKII ++ K AHAE+ A+ + ++ ++PE LYV+LEPC Sbjct: 29 VGAVLVYDNKIIGEGYHQ----KYGGAHAEVNAL-ASVSLSNRPLIPESTLYVSLEPC 81 >gi|299143100|ref|ZP_07036209.1| riboflavin biosynthesis protein RibD [Prevotella oris C735] gi|298575428|gb|EFI47325.1| riboflavin biosynthesis protein RibD [Prevotella oris C735] Length = 318 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 16 QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75 QNA L VGAV V +++II + ++ HAE+ A R +++LPE Sbjct: 19 QNAKLNPM--VGAVIVAHDRIIGEGYH----VRCGEGHAEVNAF-ASVRPEDEKLLPEAT 71 Query: 76 LYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111 +YV+LEPC+ CA I I+R G +P +G GI+ Sbjct: 72 IYVSLEPCSHYGKTPPCADLIISKGIKRCVCGCVDPFAKVQGRGIQ 117 >gi|237719659|ref|ZP_04550140.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 2_2_4] gi|229450928|gb|EEO56719.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 2_2_4] Length = 345 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 21/147 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M +E A+N L N P VGAV V + +II + ++ AHAE+ AIR Sbjct: 6 YMRRCIELAKNG-LCNVSPNPMVGAVIVCDGRIIGEGYH----IRCGEAHAEVNAIR--- 57 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + +L +YV+LEPC+ CA I +I R+ G +P G Q Sbjct: 58 SVKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGRGIQKL 117 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ + +I+ F Sbjct: 118 RDA----GREVTVGVLEEECKSLIRRF 140 >gi|329768554|ref|ZP_08260041.1| riboflavin biosynthesis protein RibD [Gemella haemolysans M341] gi|328836595|gb|EGF86254.1| riboflavin biosynthesis protein RibD [Gemella haemolysans M341] Length = 356 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 58/128 (45%), Gaps = 23/128 (17%) Query: 7 FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM+ AL EA+ A VGA+ V +NKI++R + L+ HAE AI C+ Sbjct: 5 FMNLALLEAKRGAKYTHTNPLVGAIIVKDNKIVARGSH----LRYGCEHAEKNAIST-CK 59 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGI---- 110 + E + LYVTLEPC C AI I ++ +P G GI Sbjct: 60 --TPEKIFNSTLYVTLEPCNHKGKQPPCTEAILKMGISKVVVAQLDPNPIVSGKGIKFLR 117 Query: 111 ENGTQFYT 118 +NG + T Sbjct: 118 DNGIEVTT 125 >gi|326384274|ref|ZP_08205956.1| CMP/dCMP deaminase zinc-binding protein [Gordonia neofelifaecis NRRL B-59395] gi|326197139|gb|EGD54331.1| CMP/dCMP deaminase zinc-binding protein [Gordonia neofelifaecis NRRL B-59395] Length = 148 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 2/90 (2%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNR-ELKDVTAHAEILAIRMGCRILSQEILPE 73 A+ A + P G++ V++ R +RNR D T H E R + L++E + Sbjct: 4 AREALDEGDQPFGSL-VVDAAGDVRFADRNRVSGGDHTRHPEFAIARWAAKNLTEEQRAQ 62 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 +Y + E C MC+AA + + R+ Y AS Sbjct: 63 ATVYTSGEHCPMCSAAHAWVGLGRIVYAAS 92 >gi|167762046|ref|ZP_02434173.1| hypothetical protein BACSTE_00394 [Bacteroides stercoris ATCC 43183] gi|167700138|gb|EDS16717.1| hypothetical protein BACSTE_00394 [Bacteroides stercoris ATCC 43183] Length = 347 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 63/148 (42%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ++ AQN L N P VGAV V + KII + ++ AHAE+ AIR Sbjct: 6 YMRRCIQLAQNG-LCNAAPNPMVGAVIVCDGKIIGEGYH----VRCGEAHAEVNAIR--- 57 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + +L +YV+LEPC CA I I R+ G +P G + Sbjct: 58 SVKDPSLLKRSTIYVSLEPCAHYGKTPPCADLIIEKEIPRIVIGCQDPFAKVAGRGIRKL 117 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ E R +I+ F Sbjct: 118 KDA----GREVITGVLEDECRSLIRRFI 141 >gi|310799415|gb|EFQ34308.1| cytidine and deoxycytidylate deaminase zinc-binding region [Glomerella graminicola M1.001] Length = 247 Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 21/108 (19%) Query: 17 NAALRNEIPVGAVA--VLNN------KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 N AL N P A V+N+ +++ N+N + T H E++AI I Sbjct: 69 NLALPNPCPFAAFGSVVVNHTAAGLGELVCTGANKNSVTGNPTFHGEMVAINNCSAIFVD 128 Query: 69 EILP-------------EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 P ++ LY E C MCA+AI A + YG S Sbjct: 129 PQGPFKMTPAEALAAFADLTLYTNAESCPMCASAIRWAGFKEYVYGTS 176 >gi|323487730|ref|ZP_08092988.1| hypothetical protein GPDM_00245 [Planococcus donghaensis MPA1U2] gi|323398464|gb|EGA91252.1| hypothetical protein GPDM_00245 [Planococcus donghaensis MPA1U2] Length = 162 Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 42/95 (44%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71 +E A+ A + + P G+V V + + + D T H E R LS E Sbjct: 14 VELAETALEKGDEPFGSVLVSETGDVLYEDHNHVAGGDHTQHPEFAIARWAATNLSLEER 73 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 + +Y + E C MCAAA + R+ Y +S+ + Sbjct: 74 SKATVYTSGEHCPMCAAAHGWVGLGRIVYASSSKQ 108 >gi|89097868|ref|ZP_01170755.1| riboflavin specific deaminase [Bacillus sp. NRRL B-14911] gi|89087370|gb|EAR66484.1| riboflavin specific deaminase [Bacillus sp. NRRL B-14911] Length = 371 Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 15/86 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V + +I + LK T HAE+ AIRM + + ++YVTLEPC+ Sbjct: 27 VGAVVVKDGQIAGMGAH----LKAGTQHAEVHAIRM-----ADGLARGAEIYVTLEPCSH 77 Query: 86 ------CAAAISLARIRRLYYGASNP 105 CA I + I+R+ + +P Sbjct: 78 HGKTPPCADLIIESGIKRVVIASIDP 103 >gi|294793755|ref|ZP_06758892.1| riboflavin biosynthesis protein RibD [Veillonella sp. 3_1_44] gi|294455325|gb|EFG23697.1| riboflavin biosynthesis protein RibD [Veillonella sp. 3_1_44] Length = 403 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 23/119 (19%) Query: 6 VFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 V+M A+E A+ A P VGAV V +N II + K TAHAE+ A+ Sbjct: 5 VYMKRAIELAKLATGHTS-PNPLVGAVVVKDNTIIGEGYHH----KAGTAHAEVHALNQ- 58 Query: 63 CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111 + + LYVTLEPC+ CA I A I ++ G+++P G G+E Sbjct: 59 ----AGDNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGKGME 113 >gi|222148580|ref|YP_002549537.1| hypothetical protein Avi_2145 [Agrobacterium vitis S4] gi|221735566|gb|ACM36529.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 195 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 29/61 (47%) Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 N EL + H E+ ++ + + E+ T EPCTMC +AI+ A YY S Sbjct: 51 NNELDNPLWHGEVHTLKRFYELGERPPTSELIFLSTHEPCTMCMSAITWAGFDNFYYFFS 110 Query: 104 N 104 + Sbjct: 111 H 111 >gi|325915009|ref|ZP_08177339.1| cytosine/adenosine deaminase [Xanthomonas vesicatoria ATCC 35937] gi|325538779|gb|EGD10445.1| cytosine/adenosine deaminase [Xanthomonas vesicatoria ATCC 35937] Length = 151 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 4/105 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A+ EA+ IP+GA N+ +++ NR + D + H E A R R Sbjct: 10 LLDTAIAEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR- 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 Q + + TL PC C+ + I + G S GGI Sbjct: 69 --QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGI 111 >gi|269798015|ref|YP_003311915.1| riboflavin biosynthesis protein RibD [Veillonella parvula DSM 2008] gi|269094644|gb|ACZ24635.1| riboflavin biosynthesis protein RibD [Veillonella parvula DSM 2008] Length = 404 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 23/119 (19%) Query: 6 VFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 V+M A+E A+ A P VGAV V +N II + K TAHAE+ A+ Sbjct: 6 VYMKRAIELAKLATGHTS-PNPLVGAVVVKDNTIIGEGYHH----KAGTAHAEVHALNQ- 59 Query: 63 CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111 + + LYVTLEPC+ CA I A I ++ G+++P G G+E Sbjct: 60 ----AGDNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGKGME 114 >gi|282850242|ref|ZP_06259621.1| riboflavin biosynthesis protein RibD [Veillonella parvula ATCC 17745] gi|282579735|gb|EFB85139.1| riboflavin biosynthesis protein RibD [Veillonella parvula ATCC 17745] Length = 403 Score = 38.1 bits (87), Expect = 0.46, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 23/119 (19%) Query: 6 VFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 V+M A+E A+ A P VGAV V +N II + K TAHAE+ A+ Sbjct: 5 VYMKRAIELAKLATGHTS-PNPLVGAVVVKDNTIIGEGYHH----KAGTAHAEVHALNQ- 58 Query: 63 CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111 + + LYVTLEPC+ CA I A I ++ G+++P G G+E Sbjct: 59 ----AGDNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGKGME 113 >gi|258510931|ref|YP_003184365.1| riboflavin biosynthesis protein RibD [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477657|gb|ACV57976.1| riboflavin biosynthesis protein RibD [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 371 Score = 38.1 bits (87), Expect = 0.46, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 23/128 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGA+ V +++ + + L T HAE+ A+RM + + LYVTLEPC Sbjct: 28 VGAIVVNGGRVVGQGAH----LMAGTPHAEVHALRM-----AGDAAQGATLYVTLEPCNH 78 Query: 86 ------CAAAISLARIRRLYYGA--SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 C AI +RR+ A +P+ G+ G + A E+ G+ E + Sbjct: 79 HGRTPPCTDAILATGVRRVVVAALDVDPRTAGL--GVKRLQEAGI----EVTVGVLEAEA 132 Query: 138 RQIIQDFF 145 R++ + FF Sbjct: 133 RELNRHFF 140 >gi|9759207|dbj|BAB09649.1| unnamed protein product [Arabidopsis thaliana] Length = 438 Score = 38.1 bits (87), Expect = 0.46, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 6/42 (14%) Query: 75 DLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 D+++ LEPCT+ CA A+ RI+R++Y N GG+ Sbjct: 363 DIFLLLEPCTIRDMFPRCAMALVHQRIKRIFYAFPNTTAGGL 404 >gi|294791895|ref|ZP_06757043.1| riboflavin biosynthesis protein RibD [Veillonella sp. 6_1_27] gi|294457125|gb|EFG25487.1| riboflavin biosynthesis protein RibD [Veillonella sp. 6_1_27] Length = 404 Score = 38.1 bits (87), Expect = 0.46, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 23/119 (19%) Query: 6 VFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 V+M A+E A+ A P VGAV V +N II + K TAHAE+ A+ Sbjct: 6 VYMKRAIELAKLATGHTS-PNPLVGAVVVKDNTIIGEGYHH----KAGTAHAEVHALNQ- 59 Query: 63 CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111 + + LYVTLEPC+ CA I A I ++ G+++P G G+E Sbjct: 60 ----AGDNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGKGME 114 >gi|255947438|ref|XP_002564486.1| Pc22g04480 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591503|emb|CAP97736.1| Pc22g04480 [Penicillium chrysogenum Wisconsin 54-1255] Length = 170 Score = 38.1 bits (87), Expect = 0.46, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Query: 12 LEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 + +AQ L + P A+ + +N+ I + N ++ HAE R Sbjct: 25 VHQAQAQDLHKKRPFAAILLAPDNETILLSSNSLSHVR----HAESELARNAADNYDWAY 80 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L L T EPC MCA AI A I RL Y AS Sbjct: 81 LARCTLVSTWEPCAMCAGAIYWAHIGRLVYMAS 113 >gi|120609786|ref|YP_969464.1| CMP/dCMP deaminase [Acidovorax citrulli AAC00-1] gi|120588250|gb|ABM31690.1| CMP/dCMP deaminase, zinc-binding protein [Acidovorax citrulli AAC00-1] Length = 119 Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 23/54 (42%) Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 D HAE R IL L T EPC MCA I A I R+ YGA Sbjct: 9 DTVNHAESTLAREAAARWPAGILRGCTLVTTFEPCAMCAGTIYWAGIGRVLYGA 62 >gi|229092353|ref|ZP_04223525.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-42] gi|228691055|gb|EEL44822.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-42] Length = 350 Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 19/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +N+I+ + +K HAEI AIRM + E +YVTLEPC+ Sbjct: 11 VGSVIVNDNRIVGIGAH----MKAGEPHAEIHAIRM-----AGEQARGGTIYVTLEPCSH 61 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA AI A I+++ +P G + A E+ G+ E+ S++ Sbjct: 62 HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGI----EVLVGVCEEESKK 117 Query: 140 IIQDFFK 146 + + F K Sbjct: 118 MNEVFNK 124 >gi|148654182|ref|YP_001281275.1| riboflavin biosynthesis protein RibD [Psychrobacter sp. PRwf-1] gi|148573266|gb|ABQ95325.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Psychrobacter sp. PRwf-1] Length = 368 Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 22/157 (14%) Query: 2 KKGNVF-MSCALEEAQNAAL--RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 KK +++ M+ A+EEA+ R VG V ++NN +I G + + HAE+ A Sbjct: 27 KKQDIYYMNLAIEEAKKGLFTTRPNPAVGCV-IVNNNLIVGTGYHPQAGQ---PHAEVFA 82 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 +R +++ YVTLEPC+ CA A+ + + R+ +P Sbjct: 83 LRE-----AKDNAKGATAYVTLEPCSHTGRTPPCAQALINSGVSRVVVAGLDPNPKVAGR 137 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A E+ G+S Q++ Q+ F K R Sbjct: 138 GIAMLKAAGI----EVTVGVSTQQAEQLNLGFLKAMR 170 >gi|169775663|ref|XP_001822298.1| hypothetical protein AOR_1_92134 [Aspergillus oryzae RIB40] gi|83771033|dbj|BAE61165.1| unnamed protein product [Aspergillus oryzae] Length = 164 Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 26/58 (44%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 HAE R +++ L E T EPC MCA I A I RL Y AS G+ Sbjct: 56 HAEAELARNAADNYARDYLAETTFISTWEPCAMCAGTIYWANIGRLVYLASEKALQGV 113 >gi|242374059|ref|ZP_04819633.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus epidermidis M23864:W1] gi|242348184|gb|EES39786.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus epidermidis M23864:W1] Length = 347 Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 27/128 (21%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM+ A++ AQ + I PVG+V V + +I+ + LK HAE+ A+ M + Sbjct: 4 FMNYAIQLAQMVDGQTGINPPVGSVVVKDGRIVGLGAH----LKKGDKHAEVQALDMAGQ 59 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----------KGG 108 + +YV+LEPCT C I I+++ Y + K Sbjct: 60 AAK-----DATIYVSLEPCTHHGSTPPCVDKIIEFGIKKVIYAIKDTTLVSKGDEILKEA 114 Query: 109 GIENGTQF 116 GIE QF Sbjct: 115 GIEVEFQF 122 >gi|306830959|ref|ZP_07464121.1| riboflavin biosynthesis protein RibD [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426982|gb|EFM30092.1| riboflavin biosynthesis protein RibD [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 351 Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 21/118 (17%) Query: 7 FMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M+ A+ EA+ N + VGAV V N ++I+R + L+ HAE AI + C Sbjct: 5 YMAQAIAEAKKGFRQTYTNPL-VGAVIVKNGRVIARGAH----LQYGHEHAEKNAI-LYC 58 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111 + E L LYVTLEPC C AI A I+++ G +P G G+E Sbjct: 59 E--APEELANSTLYVTLEPCHHTGKQPPCTQAIVEAGIKKVVVGQLDPNPLVAGKGLE 114 >gi|269121379|ref|YP_003309556.1| riboflavin biosynthesis protein RibD [Sebaldella termitidis ATCC 33386] gi|268615257|gb|ACZ09625.1| riboflavin biosynthesis protein RibD [Sebaldella termitidis ATCC 33386] Length = 363 Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 29/152 (19%) Query: 7 FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M ALE A+ N P VGAV V + ++ + + HAE+ A+ + Sbjct: 5 YMEMALEIAEKGLGHVNPNPLVGAVVVKDGTVVGKGYHGVYG----GPHAEVYALDEAGK 60 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIENGT 114 S E D+YVTLEPC+ CA I + I+R + G+ +P G GIE Sbjct: 61 --SAE---GADIYVTLEPCSHYGKTPPCAKKIIESGIKRCFVGSIDPNPLVSGKGIE--- 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + E++ G+ ++ I + FFK Sbjct: 113 -----MLKENDIEVHTGVLKEECDNINKAFFK 139 >gi|326328847|ref|ZP_08195181.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Nocardioidaceae bacterium Broad-1] gi|325953332|gb|EGD45338.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Nocardioidaceae bacterium Broad-1] Length = 162 Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 1/94 (1%) Query: 12 LEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 LE A A + P G+V A + NR D TAH EI R L Sbjct: 17 LELAAEALADGDGPFGSVLADSAGNALQEGRNREHTTGDPTAHPEIELARWAAIQLDPAT 76 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +Y + E C MC+AA + + R+ Y AS+ Sbjct: 77 RAGATVYTSGEHCPMCSAAHGWSGVGRIVYIASS 110 >gi|163961159|gb|ABY50083.1| cytosine deaminase [Candida tropicalis] Length = 120 Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 20/121 (16%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 + K++ + N + H E+ A+ R L + + +Y TL PC MC AI L Sbjct: 5 DGKVLGKGHNERIQKGSAILHGEMSALEDAGR-LPGKAYKDCTIYTTLSPCNMCTGAILL 63 Query: 93 ARIRRLYYGASNPKGGGIE-----NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 I+R+ G N G E NG + L + ++I+ F KE Sbjct: 64 YGIKRVVMG-ENVNFQGAEDLLRANGVEVINL-------------DDNDCKEIMSKFIKE 109 Query: 148 R 148 R Sbjct: 110 R 110 >gi|288929017|ref|ZP_06422863.1| riboflavin biosynthesis protein RibD [Prevotella sp. oral taxon 317 str. F0108] gi|288330001|gb|EFC68586.1| riboflavin biosynthesis protein RibD [Prevotella sp. oral taxon 317 str. F0108] Length = 348 Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 44/100 (44%), Gaps = 15/100 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V N++II + HAE+ A R + LP LYV+LEPC+ Sbjct: 66 VGAVIVYNDRIIGEG----YHIHCGEGHAEVNAF-AAIRPEDEPFLPHSTLYVSLEPCSH 120 Query: 86 ------CAAAISLARIRRLYYGASNP----KGGGIENGTQ 115 CA I + R+ G +P +G GIE Q Sbjct: 121 YGKTPPCADLIIRKGVPRVVVGCVDPFSKVQGRGIEKLRQ 160 >gi|223939370|ref|ZP_03631249.1| riboflavin biosynthesis protein RibD [bacterium Ellin514] gi|223891974|gb|EEF58456.1| riboflavin biosynthesis protein RibD [bacterium Ellin514] Length = 365 Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 14/87 (16%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE-VDLYVTLEPCT 84 VGAV V + K+I R G +R + HAE+ A++ S+ P+ LYVTLEPC Sbjct: 21 VGAVLVKHGKVIGR-GWHHRAGQ---PHAEVEALKDAA---SKGNDPKGATLYVTLEPCC 73 Query: 85 M------CAAAISLARIRRLYYGASNP 105 C AI A+I+++ A++P Sbjct: 74 THGRTPPCTEAIKAAKIKKVVVAATDP 100 >gi|126663421|ref|ZP_01734418.1| riboflavin biosynthesis protein RibD [Flavobacteria bacterium BAL38] gi|126624369|gb|EAZ95060.1| riboflavin biosynthesis protein RibD [Flavobacteria bacterium BAL38] Length = 346 Score = 37.7 bits (86), Expect = 0.51, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 17/126 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V NKII ++ K HAE+ A+ + + +L E +YV+LEPC+ Sbjct: 28 VGSVIVYENKIIGEGWHK----KAGEPHAEVNAVN---SVKDKSLLKEATIYVSLEPCSH 80 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C I + I + G +P NG + ++ GI E + Sbjct: 81 FGKTPPCCDLIIVNEIPNVVVGTVDPFAKVAGNGIK----KLVESGKKVTVGILEDECNE 136 Query: 140 IIQDFF 145 + + FF Sbjct: 137 LNKRFF 142 >gi|325977849|ref|YP_004287565.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177777|emb|CBZ47821.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 351 Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 21/118 (17%) Query: 7 FMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M+ A+ EA+ N + VGAV V N ++I+R + L+ HAE AI + C Sbjct: 5 YMAQAIAEAKKGFRQTYTNPL-VGAVIVKNGRVIARGAH----LQYGHEHAEKNAI-LYC 58 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111 + E L LYVTLEPC C AI A I+++ G +P G G+E Sbjct: 59 E--APEELANSTLYVTLEPCHHTGKQPPCTQAIVEAGIKKVVVGQLDPNPLVAGKGLE 114 >gi|327198164|ref|YP_004306740.1| putative dCMP deaminase [Pseudomonas phage KPP10] gi|297591690|dbj|BAJ09110.1| putative dCMP deaminase [Pseudomonas phage KPP10] Length = 129 Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 16/88 (18%) Query: 26 VGAVAVLNNKIISRAGN----------RNRE--LKDVTAHAEILAI-RMGCRILSQEILP 72 VGAV V NKIIS+ N N E + HAE A+ + C SQE Sbjct: 18 VGAVIVQGNKIISQGYNGLPGGLEGPLENEEGVTRPEVRHAEKNALLWLSC---SQESAQ 74 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++ T+ PC CA I A I+R+YY Sbjct: 75 GAWMFATMSPCEYCAHDIVDAGIKRVYY 102 >gi|46446676|ref|YP_008041.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus Protochlamydia amoebophila UWE25] gi|46400317|emb|CAF23766.1| probable diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus Protochlamydia amoebophila UWE25] Length = 368 Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 63/153 (41%), Gaps = 23/153 (15%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A+ E+ A L P VG V V + KII + AHAEI A++ Sbjct: 8 HTFMLEAIAESWKARLHAP-PNPWVGCVIVKDQKII----GKGYTYPSGQAHAEINALKS 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + E LYVTLEPC+ C AI A I +Y +P G Q Sbjct: 63 -----ASENAKGASLYVTLEPCSHHGKTPPCTEAIIRAGILNVYVALKDPDSRVRGQGIQ 117 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 A H + GI E+ ++ ++ + +R Sbjct: 118 KLREAGIH----VKVGIGEKEAKVVLTPYLYQR 146 >gi|171691546|ref|XP_001910698.1| hypothetical protein [Podospora anserina S mat+] gi|170945721|emb|CAP71834.1| unnamed protein product [Podospora anserina S mat+] Length = 233 Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 40/111 (36%), Gaps = 22/111 (19%) Query: 12 LEEAQNAALRNEIPVGAVAVL---------NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +A AL + P A + +I N N + + T H EI AI Sbjct: 49 IHQANTLALSHPCPFAAFGTVIVNHTSANPQGTLICTGSNGNSRIGNPTLHGEIAAIN-N 107 Query: 63 CRIL------------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 C L S ++ LY E C MCAAA+ A R YG Sbjct: 108 CSSLFVSSAYNMTPAESLAAFKDLTLYTNAESCLMCAAAVRWAGFREYVYG 158 >gi|167768613|ref|ZP_02440666.1| hypothetical protein CLOSS21_03172 [Clostridium sp. SS2/1] gi|167710137|gb|EDS20716.1| hypothetical protein CLOSS21_03172 [Clostridium sp. SS2/1] Length = 361 Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 18/81 (22%) Query: 75 DLYVTLEPCTM------CAAAISLARIRRLYYG--ASNPK--GGGIENGTQFYTLATCHH 124 ++YVTLEPC C A+ A I+++Y G NPK GGGI+ H Sbjct: 61 EIYVTLEPCCHYGKTPPCTEALIEAGIKKVYVGNLDPNPKVAGGGIK--------ILNDH 112 Query: 125 SPEIYPGISEQRSRQIIQDFF 145 E GI E+ RQ+ FF Sbjct: 113 GIETETGILEEECRQLNDIFF 133 >gi|254975336|ref|ZP_05271808.1| riboflavin biosynthesis protein [Clostridium difficile QCD-66c26] gi|255092726|ref|ZP_05322204.1| riboflavin biosynthesis protein [Clostridium difficile CIP 107932] gi|255314465|ref|ZP_05356048.1| riboflavin biosynthesis protein [Clostridium difficile QCD-76w55] gi|255517142|ref|ZP_05384818.1| riboflavin biosynthesis protein [Clostridium difficile QCD-97b34] gi|255650247|ref|ZP_05397149.1| riboflavin biosynthesis protein [Clostridium difficile QCD-37x79] gi|260683365|ref|YP_003214650.1| riboflavin biosynthesis protein [Clostridium difficile CD196] gi|260686960|ref|YP_003218093.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Clostridium difficile R20291] gi|306520226|ref|ZP_07406573.1| riboflavin biosynthesis protein [Clostridium difficile QCD-32g58] gi|260209528|emb|CBA63111.1| riboflavin biosynthesis protein [Clostridium difficile CD196] gi|260212976|emb|CBE04276.1| riboflavin biosynthesis protein [Clostridium difficile R20291] Length = 367 Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 21/147 (14%) Query: 7 FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A+E A+N N P VG V V ++ II + + K + HAE+ AI Sbjct: 10 YMKKAIELAKNGEGFVNPNPLVGCVIVKDSNIIGKGYHE----KFGSNHAEVNAINS--- 62 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +++ L + LYV LEPC+ C I +I+R+ +P NG + Sbjct: 63 --AKQSLKDSTLYVNLEPCSHYGKTPPCVDKIIQNKIKRVVISTLDPNPLVCGNGVKKLK 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145 ++ ++ GI E +R + + FF Sbjct: 121 ----DNNIDVTVGILEDEARDLNEAFF 143 >gi|317497909|ref|ZP_07956219.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium 5_1_63FAA] gi|316894890|gb|EFV17062.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium 5_1_63FAA] Length = 366 Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust. Identities = 49/151 (32%), Positives = 66/151 (43%), Gaps = 29/151 (19%) Query: 7 FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A+E A+ N P VGAV V + K+I + K HAE A++ C Sbjct: 5 YMRRAIELAKKGCGYTNPNPLVGAVIVKDQKVIGEGYHE----KIGGLHAERNALK-NCI 59 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYG--ASNPK--GGGIENGT 114 E ++YVTLEPC C A+ A I+++Y G NPK GGGI+ Sbjct: 60 ----EDPKGAEIYVTLEPCCHYGKTPPCTEALIEAGIKKVYVGNLDPNPKVAGGGIK--- 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 H E GI E+ RQ+ FF Sbjct: 113 -----ILNDHGIETETGILEEECRQLNDIFF 138 >gi|126699306|ref|YP_001088203.1| riboflavin biosynthesis protein [Clostridium difficile 630] gi|255100831|ref|ZP_05329808.1| riboflavin biosynthesis protein [Clostridium difficile QCD-63q42] gi|255306720|ref|ZP_05350891.1| riboflavin biosynthesis protein [Clostridium difficile ATCC 43255] gi|115250743|emb|CAJ68567.1| Riboflavin biosynthesis protein ribD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase ; 5-amino-6-(5-phosphoribosylamino)uracil reductase] [Clostridium difficile] Length = 370 Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 21/147 (14%) Query: 7 FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A+E A+N N P VG V V ++ II + + K + HAE+ AI Sbjct: 13 YMKKAIELAKNGEGFVNPNPLVGCVIVKDSNIIGKGYHE----KFGSNHAEVNAINS--- 65 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +++ L + LYV LEPC+ C I +I+R+ +P NG + Sbjct: 66 --AKQSLKDSTLYVNLEPCSHYGKTPPCVDKIIQNKIKRVVISTLDPNPLVCGNGVK--- 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145 ++ ++ GI E +R + + FF Sbjct: 121 -KLKDNNIDVTVGILEDEARDLNEAFF 146 >gi|332885428|gb|EGK05677.1| riboflavin biosynthesis protein RibD [Dysgonomonas mossii DSM 22836] Length = 348 Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 7/58 (12%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 VGAV V N+KII +R AHAE+ AI + + +L E +YV+LEPC Sbjct: 28 VGAVVVHNDKIIGEGFHREYG----KAHAEVNAI---ASVKDKSLLKESTIYVSLEPC 78 >gi|325922230|ref|ZP_08184016.1| cytosine/adenosine deaminase [Xanthomonas gardneri ATCC 19865] gi|325547300|gb|EGD18368.1| cytosine/adenosine deaminase [Xanthomonas gardneri ATCC 19865] Length = 151 Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 4/105 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A+ EA+ IP+GA N+ +++ NR + D + H E A R R Sbjct: 10 LLDTAIAEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR- 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 Q + + TL PC C+ + I + G S GG+ Sbjct: 69 --QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGV 111 >gi|218673827|ref|ZP_03523496.1| putative guanine/cytosine deaminase protein [Rhizobium etli GR56] Length = 195 Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 30/61 (49%) Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 N EL++ H E+ ++ + + ++ T EPCTMC +AI+ A YY S Sbjct: 51 NNELENPLWHGEVHTLKRFYELGDKPATKDLIFLSTHEPCTMCMSAITWAGFDNFYYFFS 110 Query: 104 N 104 + Sbjct: 111 H 111 >gi|150016108|ref|YP_001308362.1| riboflavin biosynthesis protein RibD [Clostridium beijerinckii NCIMB 8052] gi|149902573|gb|ABR33406.1| riboflavin biosynthesis protein RibD [Clostridium beijerinckii NCIMB 8052] Length = 361 Score = 37.7 bits (86), Expect = 0.57, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 29/152 (19%) Query: 7 FMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M ALE A+ + N P VGAV V +N+II + AHAE A++ + Sbjct: 5 YMEIALELAKRGIGKVNPNPLVGAVIVKDNEIIGEGYHECYG----EAHAERNAVKNATK 60 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIENGT 114 + E +YVTLEPC C I + +R+ G +P G +E Sbjct: 61 SVE-----ESTIYVTLEPCAHYGKTPPCVDLIIEKKFKRVVIGMLDPNELVSGKSVEKLK 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q H E+ GI E+ +++ + F K Sbjct: 116 Q--------HGIEVVVGIKEKECKELNEIFIK 139 >gi|251796359|ref|YP_003011090.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. JDR-2] gi|247543985|gb|ACT01004.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. JDR-2] Length = 368 Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 37/156 (23%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +MS ALE A A+ + I VG V V + +II LK T HAE+ A++M Sbjct: 9 YMSLALELAAKASGQTGINPVVGCVVVKDGRII----GVGTHLKRGTGHAEVHALQM--- 61 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGI---- 110 + + +YVTLEPC+ C I A+ R+ ++P G GI Sbjct: 62 --AGDEAEGATVYVTLEPCSHYGKTPPCCERIINAKAARVVVATTDPNPQVAGRGIARLR 119 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 E G E+ G+ E++SR + + F K Sbjct: 120 EEGI------------EVEVGLLEEQSRSMNEKFNK 143 >gi|167630209|ref|YP_001680708.1| riboflavin biosynthesis protein ribd [Heliobacterium modesticaldum Ice1] gi|167592949|gb|ABZ84697.1| riboflavin biosynthesis protein ribd [Heliobacterium modesticaldum Ice1] Length = 374 Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 15/86 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V + ++I +R K T HAE+ A+R + E LYVTLEPC Sbjct: 29 VGAVVVKDGRVIGEGYHR----KAGTPHAEVHALRQ-----AGEAACGGTLYVTLEPCNH 79 Query: 86 ------CAAAISLARIRRLYYGASNP 105 C AI A+I R+ ++P Sbjct: 80 HGRTPPCTEAIIAAKISRVVAAVADP 105 >gi|313891665|ref|ZP_07825272.1| riboflavin biosynthesis protein RibD [Dialister microaerophilus UPII 345-E] gi|313119943|gb|EFR43128.1| riboflavin biosynthesis protein RibD [Dialister microaerophilus UPII 345-E] Length = 378 Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 17/107 (15%) Query: 7 FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +MS AL+ A++ E VGAV V N K+I +++ DV HAE+ A + C+ Sbjct: 9 WMSHALDLAKHGYWYTETNPLVGAVLVKNGKVIGEG--WHKKYGDV--HAEVNAFK-NCK 63 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 E LYVTLEPC C + +++R+ +P Sbjct: 64 ----ENTEHATLYVTLEPCCHYGKTPPCLNLVLQKKVKRVVIAMKDP 106 >gi|297196280|ref|ZP_06913678.1| cytidine/deoxycytidylate deaminase [Streptomyces pristinaespiralis ATCC 25486] gi|297153148|gb|EDY66892.2| cytidine/deoxycytidylate deaminase [Streptomyces pristinaespiralis ATCC 25486] Length = 140 Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 3/95 (3%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE--LKDVTAHAEILAIRMGCRILSQE 69 +E A A + P G+V V + + RA +RNRE L D T H E R ++ + Sbjct: 18 VELAAEAVEAGDEPFGSVLVDGDGRV-RAEDRNRETSLADQTQHPEFALARWAAEHMTAQ 76 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 ++ + E C MCAAA + R+ Y S+ Sbjct: 77 ERRAATVFTSGEHCPMCAAAHGWVGLGRIVYIVSS 111 >gi|325104661|ref|YP_004274315.1| CMP/dCMP deaminase zinc-binding protein [Pedobacter saltans DSM 12145] gi|324973509|gb|ADY52493.1| CMP/dCMP deaminase zinc-binding protein [Pedobacter saltans DSM 12145] Length = 157 Score = 37.7 bits (86), Expect = 0.60, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 27/134 (20%) Query: 6 VFMSCALEEAQNA-ALRNEIPVGAVAVLNNKIIS------RAGNRN-----------REL 47 +FM+ A + AQ + ++N VGAV + +IIS AG N R+ Sbjct: 8 IFMNLASDLAQKSHCVKNH--VGAVLTKDTRIISIGYNGPPAGTHNCDEEWPEEGCPRDS 65 Query: 48 KD---VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 K+ + HAE AI + +Q + LY TL PC CA I + I+R++Y S Sbjct: 66 KNSCSLALHAEENAILYAVKNGAQ--IQGATLYTTLSPCISCARLIYASGIQRVFYKYSY 123 Query: 105 P--KGGGIENGTQF 116 KG ++ G +F Sbjct: 124 AAYKGLSLDEGVEF 137 >gi|239827589|ref|YP_002950213.1| riboflavin biosynthesis protein RibD [Geobacillus sp. WCH70] gi|239807882|gb|ACS24947.1| riboflavin biosynthesis protein RibD [Geobacillus sp. WCH70] Length = 361 Score = 37.7 bits (86), Expect = 0.60, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 29/145 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M+ +M A+E A+ A + P VGAV V + +I+ + LK HAE+ Sbjct: 1 MRNDEQYMRLAIEIAK-AGIGQTSPNPVVGAVVVKDGEIVGFGAH----LKAGELHAEVH 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG-GIENGTQF 116 AIRM + E +YVTLEPC+ +YG + P +E G Q Sbjct: 56 AIRM-----AGEKAKGSTVYVTLEPCS--------------HYGKTPPCADLLVETGVQR 96 Query: 117 YTLATCHHSPEIY-PGISEQRSRQI 140 +AT +P + GI + RS I Sbjct: 97 VVIATTDPNPLVAGKGIEKLRSAGI 121 >gi|257055207|ref|YP_003133039.1| cytosine/adenosine deaminase [Saccharomonospora viridis DSM 43017] gi|256585079|gb|ACU96212.1| cytosine/adenosine deaminase [Saccharomonospora viridis DSM 43017] Length = 163 Score = 37.7 bits (86), Expect = 0.60, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 2/99 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR-ELKDVTAHAEILAIRMGCRI 65 ++ +E A A + P G+V V ++ RA +RNR D T H E R Sbjct: 9 YLRRCVELASEALEAGDEPFGSVLVDAEGVV-RAEDRNRIAGGDRTRHPEFELARWSTTA 67 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L+ E +Y + E C MCAAA + R+ Y AS+ Sbjct: 68 LTPEERRGATVYTSGEHCPMCAAAHGWVGLGRIVYVASS 106 >gi|18976434|ref|NP_577791.1| riboflavin-specific deaminase [Pyrococcus furiosus DSM 3638] gi|18891968|gb|AAL80186.1| riboflavin-specific deaminase [Pyrococcus furiosus DSM 3638] Length = 354 Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 47/107 (43%), Gaps = 14/107 (13%) Query: 7 FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL A+ L N P VGAV V +NKII ++ K HAE+ AI R Sbjct: 6 FMKLALRLARKGEGLTNPNPMVGAVLVKDNKIIGTGWHKRFGDK----HAEVNAIEDAKR 61 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + LYVTLEPC+ CA I I R+ +P Sbjct: 62 --KGYTIEGATLYVTLEPCSHWGKQPPCADRIIEEGISRVVIAMVDP 106 >gi|254469111|ref|ZP_05082516.1| riboflavin biosynthesis protein RibD [Pseudovibrio sp. JE062] gi|211960946|gb|EEA96141.1| riboflavin biosynthesis protein RibD [Pseudovibrio sp. JE062] Length = 381 Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 13/107 (12%) Query: 7 FMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM+ AL A R PVGA+ + + L +HAE+LAI+ Sbjct: 18 FMAAALSYGIRAKGRTWPNPPVGAILTKDFGDGPVIVGQGATLPPGGSHAEVLAIKD--- 74 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + E YVTLEPC CA A+ A + R+ YG ++P Sbjct: 75 --AGEHAKGATAYVTLEPCAHYGRTGPCARALVAAGVSRVVYGTADP 119 >gi|238878760|gb|EEQ42398.1| conserved hypothetical protein [Candida albicans WO-1] Length = 275 Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 22/41 (53%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 +Y T EPC MC A+ +RI R+ Y GG+E+ Q Sbjct: 198 VYTTHEPCVMCCMALVHSRIGRIIYLKPEKSSGGLESHYQL 238 >gi|164658437|ref|XP_001730344.1| hypothetical protein MGL_2726 [Malassezia globosa CBS 7966] gi|159104239|gb|EDP43130.1| hypothetical protein MGL_2726 [Malassezia globosa CBS 7966] Length = 489 Score = 37.4 bits (85), Expect = 0.62, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 14/71 (19%) Query: 53 HAEILAIRMGCRILSQE--------------ILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HA + A+R I SQ +L + +++T EPC CA A+ +R+R + Sbjct: 362 HAVLNAVRRVAHIRSQSRSSTNEEAENGQDYLLTGLTMFITHEPCVYCAMALIHSRVRSV 421 Query: 99 YYGASNPKGGG 109 ++ +P+ GG Sbjct: 422 FFLFPSPRSGG 432 >gi|258647712|ref|ZP_05735181.1| riboflavin biosynthesis protein RibD [Prevotella tannerae ATCC 51259] gi|260852547|gb|EEX72416.1| riboflavin biosynthesis protein RibD [Prevotella tannerae ATCC 51259] Length = 322 Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 68/162 (41%), Gaps = 35/162 (21%) Query: 1 MKKGNVFMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M+ +++M L A+N L N + VGAV V ++II K AHAE+ Sbjct: 1 MEIKDIYMHRCLRLAENGRLSAPPNPM-VGAVIVYKDRIIGEG----YHAKCGQAHAEVN 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KG 107 AI R + L + LYV+LEPC CA I I R+ G +P +G Sbjct: 56 AI-ASVRPDDRPHLQDSTLYVSLEPCAHYGRTPPCARLILNTGIPRVVVGCEDPFDKVEG 114 Query: 108 GGI----ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 GI + G Q G+ EQ R++ + FF Sbjct: 115 RGITMLRDGGVQVTV------------GVLEQECRELNRHFF 144 >gi|111024048|ref|YP_707020.1| cytosine/ adenosine deaminase [Rhodococcus jostii RHA1] gi|110823578|gb|ABG98862.1| possible cytosine/ adenosine deaminase [Rhodococcus jostii RHA1] Length = 109 Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust. Identities = 15/26 (57%), Positives = 17/26 (65%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYG 101 LY T EPC+MCA AI + RL YG Sbjct: 78 LYTTAEPCSMCAGAIDWGNVLRLVYG 103 >gi|145223918|ref|YP_001134596.1| CMP/dCMP deaminase, zinc-binding [Mycobacterium gilvum PYR-GCK] gi|145216404|gb|ABP45808.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium gilvum PYR-GCK] Length = 163 Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 7/92 (7%) Query: 14 EAQNAALRNEIPVGAVAVLNNKIISRAGNRNR-ELKDVTAHAEILAIRMGCRILSQEILP 72 EAQ+A + P G++ +L+ ++R +RNR + D T H E + LS + Sbjct: 26 EAQDA---GDEPFGSL-LLDADGVTRVEDRNRVKDGDATRHPEYAIAKWAVENLSPDD-- 79 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +Y + E C MCAAA + + R+ Y AS+ Sbjct: 80 RATVYTSGEHCPMCAAAHAWVGLGRVVYAASS 111 >gi|330996373|ref|ZP_08320256.1| riboflavin biosynthesis protein RibD [Paraprevotella xylaniphila YIT 11841] gi|329573231|gb|EGG54845.1| riboflavin biosynthesis protein RibD [Paraprevotella xylaniphila YIT 11841] Length = 358 Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 17/114 (14%) Query: 1 MKKGNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M +MS ++ A+N A N + VGAV V + KII ++ HAE+ Sbjct: 1 MTTDEKYMSRCIQLARNGFYGAAPNPM-VGAVIVHDGKII----GEGYHVRCGGPHAEVN 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 AIR + + E+L E +YV+LEPC+ CA I I R+ G +P Sbjct: 56 AIR---SVGNPELLKESTIYVSLEPCSHYGKTPPCADLIVEKGIPRVVVGCMDP 106 >gi|291541288|emb|CBL14399.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Roseburia intestinalis XB6B4] Length = 396 Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 55/127 (43%), Gaps = 24/127 (18%) Query: 2 KKGNVFM--------SCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAH 53 +KG +FM + L E + VGAV V ++II +++ + A Sbjct: 25 RKGKIFMQQERYMRRAMELAELGRGWTKTNPVVGAVLVKEDRIIGE--GYHKKFGGLHAE 82 Query: 54 AEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGAS--NP 105 E LA CR ++ DLYVTLEPC C A+ A I ++ GA NP Sbjct: 83 REALA---DCRSRGED-PAGADLYVTLEPCCHYGKTPPCTQAVIEAGISHVFVGAKDINP 138 Query: 106 --KGGGI 110 GGGI Sbjct: 139 LVAGGGI 145 >gi|327440271|dbj|BAK16636.1| pyrimidine deaminase [Solibacillus silvestris StLB046] Length = 371 Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 17/113 (15%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 MK +M ALE A +A N P VGAV V + I+ +R K HAE+ A Sbjct: 1 MKTDQDYMQLALELAASARGNTNPNPLVGAVIVKDGVIVGTGLHR----KAGEPHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + M + E + +YVTLEPC+ CA + + +R+ +P Sbjct: 57 VNM-----AGEHTKDATIYVTLEPCSHYGKTPPCAKLLKESGFKRVVVATEDP 104 >gi|253571299|ref|ZP_04848706.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 1_1_6] gi|251839252|gb|EES67336.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 1_1_6] Length = 345 Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 21/147 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M +E A+N L N P VGAV V + II + ++ AHAE+ AIR Sbjct: 6 YMRRCIELAKNG-LCNVAPNPMVGAVIVCDGLIIGEGYH----IRCGEAHAEVNAIR--- 57 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + +L +YV+LEPC+ CA I +I R+ G +P G Q Sbjct: 58 SVKDKSLLSRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSQVAGRGIQKL 117 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ R +I+ F Sbjct: 118 RDA----GREVTVGVLEKECRYLIRRF 140 >gi|187932958|ref|YP_001885493.1| riboflavin biosynthesis protein RibD [Clostridium botulinum B str. Eklund 17B] gi|187721111|gb|ACD22332.1| riboflavin biosynthesis protein RibD [Clostridium botulinum B str. Eklund 17B] Length = 378 Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M ALE A+ + N P VGAV V +N+II + AHAE+ AI + Sbjct: 20 YMDLALELAKKGIGKVNPNPLVGAVIVKDNEIIGTGYHEYYG----GAHAEVDAINNTTK 75 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 L +Y+TLEPC C I +I+++ G +P + +G Sbjct: 76 SLEGS-----TIYITLEPCAHYGKTPPCVNLIIEKKIKKVVIGMLDP--NPMVSGKSVKK 128 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146 L + E+ G+ E++ +++ + F K Sbjct: 129 LK--ENDIEVIVGVEEEKCKKLNESFIK 154 >gi|308803240|ref|XP_003078933.1| COG1985: Pyrimidine reductase, riboflavin biosynthesis (ISS) [Ostreococcus tauri] gi|116057386|emb|CAL51813.1| COG1985: Pyrimidine reductase, riboflavin biosynthesis (ISS) [Ostreococcus tauri] Length = 207 Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 23/103 (22%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK 106 HAE+ A+R + E+ YVTLEPC CA A+ A ++R+ G +P Sbjct: 108 HAEVFALRA-----AGELARGATAYVTLEPCNHFGRTPPCARALVDAGVKRVVVGFVDPD 162 Query: 107 ----GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 GGGI+ ++ G E R R+I DF Sbjct: 163 PRVSGGGIQT--------LLDAGIDVAVGCEEARCREINADFI 197 >gi|68476669|ref|XP_717627.1| potential tRNA wobble position adenosine deaminase subunit [Candida albicans SC5314] gi|68476816|ref|XP_717553.1| potential tRNA wobble position adenosine deaminase subunit [Candida albicans SC5314] gi|46439268|gb|EAK98588.1| potential tRNA wobble position adenosine deaminase subunit [Candida albicans SC5314] gi|46439345|gb|EAK98664.1| potential tRNA wobble position adenosine deaminase subunit [Candida albicans SC5314] Length = 326 Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 22/41 (53%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 +Y T EPC MC A+ +RI R+ Y GG+E+ Q Sbjct: 249 VYTTHEPCVMCCMALVHSRIGRIIYLKPEKSSGGLESHYQL 289 >gi|218458238|ref|ZP_03498329.1| putative guanine/cytosine deaminase protein [Rhizobium etli Kim 5] Length = 188 Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 30/61 (49%) Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 N EL++ H E+ ++ + + ++ T EPCTMC +AI+ A YY S Sbjct: 51 NNELENPLWHGEVHTLKRFYELGDKPATKDLIFLSTHEPCTMCMSAITWAGFDNFYYFFS 110 Query: 104 N 104 + Sbjct: 111 H 111 >gi|171683047|ref|XP_001906466.1| hypothetical protein [Podospora anserina S mat+] gi|170941483|emb|CAP67134.1| unnamed protein product [Podospora anserina S mat+] Length = 243 Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 11/79 (13%) Query: 36 IISRAGNRNRELKDVTAHAEILAIRMGCRIL-----------SQEILPEVDLYVTLEPCT 84 +I N+N + T H E+ AI I S ++ LY E C Sbjct: 90 LICTGANQNSLAGNPTLHGEMAAINNCSSIFVSSAYNMTPAESLAAFKDLSLYTNAESCP 149 Query: 85 MCAAAISLARIRRLYYGAS 103 MCAAA+ A R YG S Sbjct: 150 MCAAAVRWAGFREYVYGVS 168 >gi|251811149|ref|ZP_04825622.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus epidermidis BCM-HMP0060] gi|282875812|ref|ZP_06284679.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis SK135] gi|251805369|gb|EES58026.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus epidermidis BCM-HMP0060] gi|281294837|gb|EFA87364.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis SK135] gi|329730651|gb|EGG67035.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis VCU144] gi|329737423|gb|EGG73677.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis VCU028] Length = 347 Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 19/107 (17%) Query: 7 FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GC 63 FM A++ A+ N PVG+V V N +I+ + LK HAE+ AI M G Sbjct: 4 FMDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAH----LKKGDKHAEVQAIEMAGL 59 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASN 104 I YV+LEPCT C I A I ++ Y + Sbjct: 60 NTQGATI------YVSLEPCTHHGSTPPCVDKIIEAGISKVIYAVKD 100 >gi|289663533|ref|ZP_06485114.1| hypothetical protein XcampvN_10764 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289670923|ref|ZP_06491998.1| hypothetical protein XcampmN_21153 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 186 Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 12/137 (8%) Query: 17 NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS----QEIL 71 N R+ P GAV +++II+ A NR AHAE +A + + L ++L Sbjct: 41 NVQERSGGPFGAVVFGPDHRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQTPRLNDVL 100 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 V L + +PC C A A I RL GA + + TQF P + G Sbjct: 101 APVTLATSAQPCCQCYGATVWAGIDRLLIGA---RADDVMALTQFDEGPL----PADWVG 153 Query: 132 ISEQRSRQIIQDFFKER 148 +R ++++D +++ Sbjct: 154 ELSRRGIEVVRDVLRDQ 170 >gi|57867218|ref|YP_188900.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis RP62A] gi|57637876|gb|AAW54664.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis RP62A] Length = 347 Score = 37.4 bits (85), Expect = 0.70, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 19/107 (17%) Query: 7 FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GC 63 FM A++ A+ N PVG+V V N +I+ + LK HAE+ AI M G Sbjct: 4 FMDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAH----LKKGDKHAEVQAIEMAGL 59 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASN 104 I YV+LEPCT C I A I ++ Y + Sbjct: 60 NTQGATI------YVSLEPCTHHGSTPPCVDKIIEAGISKVIYAVKD 100 >gi|298386833|ref|ZP_06996388.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 1_1_14] gi|298260507|gb|EFI03376.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 1_1_14] Length = 345 Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 21/147 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M +E A+N L N P VGAV V + II + ++ AHAE+ AIR Sbjct: 6 YMRRCIELAKNG-LCNVAPNPMVGAVIVCDGLIIGEGYH----IRCGEAHAEVNAIR--- 57 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + +L +YV+LEPC+ CA I +I R+ G +P G Q Sbjct: 58 SVKDKSLLSRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSQVAGRGIQKL 117 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ R +I+ F Sbjct: 118 RDA----GREVTIGVLEKECRYLIRRF 140 >gi|218508930|ref|ZP_03506808.1| putative guanine/cytosine deaminase protein [Rhizobium etli Brasil 5] Length = 163 Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 30/61 (49%) Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 N EL++ H E+ ++ + + ++ T EPCTMC +AI+ A YY S Sbjct: 19 NNELENPLWHGEVHTLKRFYELGDKPATRDLIFLSTHEPCTMCMSAITWAGFDNFYYFFS 78 Query: 104 N 104 + Sbjct: 79 H 79 >gi|241204550|ref|YP_002975646.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858440|gb|ACS56107.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 195 Score = 37.4 bits (85), Expect = 0.74, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 30/61 (49%) Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 N EL++ H E+ ++ + + ++ T EPCTMC +AI+ A YY S Sbjct: 51 NNELENPLWHGEVHTLKRFYELGDKPPTKDLIFLSTHEPCTMCMSAITWAGFDNFYYFFS 110 Query: 104 N 104 + Sbjct: 111 H 111 >gi|190571227|ref|YP_001975585.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357499|emb|CAQ54935.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 405 Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 31/124 (25%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRA----GNRNRELKDVTAHAEIL 57 + FMS AL+ A+ + L + P VG + V N +I G R HAE++ Sbjct: 4 DYFMSIALKLAEKS-LGSVAPNPAVGCIIVKNGMVIGEGYTGIGGR--------PHAEVV 54 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----G 107 A++ ++++ +YVTLEPC C A I + I+R+ A +P G Sbjct: 55 ALQN-----AKDLTHSATMYVTLEPCCHFGVTEPCTAEIIKSGIKRVVIAAIDPDSRVSG 109 Query: 108 GGIE 111 GGI+ Sbjct: 110 GGIK 113 >gi|260910408|ref|ZP_05917080.1| riboflavin biosynthesis protein RibD [Prevotella sp. oral taxon 472 str. F0295] gi|260635484|gb|EEX53502.1| riboflavin biosynthesis protein RibD [Prevotella sp. oral taxon 472 str. F0295] Length = 351 Score = 37.4 bits (85), Expect = 0.76, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 15/97 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V ++II + + HAE+ A R + +LP+ LYV+LEPC+ Sbjct: 74 VGAVIVYRDRIIGEGYH----VHCGEGHAEVNAF-AAVRPEDESLLPQSTLYVSLEPCSH 128 Query: 86 ------CAAAISLARIRRLYYGASNP----KGGGIEN 112 CA I + R+ G +P +G GIE Sbjct: 129 YGKTPPCADLIIRKEVARVVVGCIDPFAKVQGRGIEK 165 >gi|115385499|ref|XP_001209296.1| hypothetical protein ATEG_09994 [Aspergillus terreus NIH2624] gi|114187743|gb|EAU29443.1| hypothetical protein ATEG_09994 [Aspergillus terreus NIH2624] Length = 163 Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 23/51 (45%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 HAE R + E L L T EPC MCA I A I RL Y AS Sbjct: 56 HAECELARNAADNFAPEYLARSTLVSTWEPCAMCAGTIYWANIGRLVYLAS 106 >gi|21230291|ref|NP_636208.1| hypothetical protein XCC0817 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769715|ref|YP_244477.1| hypothetical protein XC_3413 [Xanthomonas campestris pv. campestris str. 8004] gi|188992931|ref|YP_001904941.1| hypothetical protein xccb100_3536 [Xanthomonas campestris pv. campestris str. B100] gi|21111839|gb|AAM40132.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575047|gb|AAY50457.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] gi|167734691|emb|CAP52901.1| Conserved hypothetical protein [Xanthomonas campestris pv. campestris] Length = 186 Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 5/91 (5%) Query: 17 NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS----QEIL 71 N R+ P GAV +++II+ A NR AHAE +A + + L ++L Sbjct: 41 NVEARSGGPFGAVVFGPDDRIIAAAVNRVVPQNTSLAHAENMAYMLAQQRLQTPRLNDVL 100 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 V L + +PC C A A I RL GA Sbjct: 101 SPVTLATSAQPCCQCYGATVWAGIDRLLIGA 131 >gi|27468359|ref|NP_764996.1| riboflavin specific deaminase [Staphylococcus epidermidis ATCC 12228] gi|27315905|gb|AAO05040.1|AE016748_274 riboflavin specific deaminase [Staphylococcus epidermidis ATCC 12228] Length = 347 Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 19/107 (17%) Query: 7 FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GC 63 FM A++ A+ N PVG+V V N +I+ + LK HAE+ AI M G Sbjct: 4 FMDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAH----LKKGDKHAEVQAIEMAGL 59 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASN 104 I YV+LEPCT C I A I ++ Y + Sbjct: 60 NTQGATI------YVSLEPCTHHGSTPPCVHKIIEAGISKVIYAVKD 100 >gi|295698401|ref|YP_003603056.1| riboflavin biosynthesis protein RibD [Candidatus Riesia pediculicola USDA] gi|291157057|gb|ADD79502.1| riboflavin biosynthesis protein RibD [Candidatus Riesia pediculicola USDA] Length = 373 Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 19/108 (17%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FMS A+ A+ P VG V V NN+I+ + + K +HAE+LA++ Sbjct: 8 FMSRAIFLAKKGKFTTS-PNPNVGCVIVQNNRIVGESYHS----KTGESHAEVLAMKKAG 62 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 L +YVTLEPC C + A+I +++ ++P Sbjct: 63 HFLKG-----ATVYVTLEPCNHYGLTPPCVDELINAKISKIFVSMTDP 105 >gi|238019274|ref|ZP_04599700.1| hypothetical protein VEIDISOL_01138 [Veillonella dispar ATCC 17748] gi|237863973|gb|EEP65263.1| hypothetical protein VEIDISOL_01138 [Veillonella dispar ATCC 17748] Length = 404 Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 15/86 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V +N II + K TAHAE+ A+ + + LYVTLEPC+ Sbjct: 28 VGAVVVKDNTIIGEGYHH----KAGTAHAEVHALNQ-----AGDNAKGATLYVTLEPCSH 78 Query: 86 ------CAAAISLARIRRLYYGASNP 105 CA I A I ++ G+++P Sbjct: 79 YGKTPPCALRIIEAGIAKVVVGSTDP 104 >gi|312885990|ref|ZP_07745618.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM 18603] gi|311301527|gb|EFQ78568.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM 18603] Length = 150 Score = 37.4 bits (85), Expect = 0.78, Method: Compositional matrix adjust. Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 33/138 (23%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIIS------RAGNRN-----------REL 47 ++FM+ AL+ AQ + + VGAV + +IIS AG N R+ Sbjct: 8 HIFMNLALDLAQRSHCV-KAQVGAVLAKDTRIISIGYNGPPAGTHNCDEEWPETGCARDA 66 Query: 48 K---DVTAHAE----ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 K + HAE + A++ G R L LY TL PC CA I A I+ +Y+ Sbjct: 67 KGSCSLALHAEENAILYAVKNGAR------LEGATLYTTLSPCLPCARLIFSAGIKHVYF 120 Query: 101 GASNP--KGGGIENGTQF 116 S KG + G +F Sbjct: 121 KKSYAAYKGLPFDEGVEF 138 >gi|303258272|ref|ZP_07344279.1| riboflavin biosynthesis protein RibD [Burkholderiales bacterium 1_1_47] gi|302859025|gb|EFL82109.1| riboflavin biosynthesis protein RibD [Burkholderiales bacterium 1_1_47] Length = 363 Score = 37.4 bits (85), Expect = 0.79, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 30/157 (19%) Query: 7 FMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M ALE A+ A R P VG V V + +II + K AHAE++A+R Sbjct: 8 YMRRALELAKKA--RFNCPPNPAVGCVIVKDRRIIGEGFTQ----KTGEAHAEVMALRDA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIEN 112 E + +YVTLEPC+ CA A+ A++ R+ +P G G++ Sbjct: 62 AS--RGESVEGATVYVTLEPCSHYGRTPPCALALKNAKVARVVAALKDPNPLVAGKGLKM 119 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + C G+ + + +I + F K +R Sbjct: 120 LEEAGVKVEC--------GLEAEEAEEINRGFLKRQR 148 >gi|253578467|ref|ZP_04855739.1| riboflavin biosynthesis protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850785|gb|EES78743.1| riboflavin biosynthesis protein [Ruminococcus sp. 5_1_39BFAA] Length = 375 Score = 37.4 bits (85), Expect = 0.79, Method: Compositional matrix adjust. Identities = 41/114 (35%), Positives = 52/114 (45%), Gaps = 19/114 (16%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+K +M ALE AQ P VGAV V K+I + +R K HAE A Sbjct: 7 MEKDRQYMKMALELAQKGMGFTAPNPMVGAVIVKRGKVIGQGYHR----KYGEPHAEREA 62 Query: 59 IRMGCRILSQEILPE-VDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + S PE +YVTLEPC C AI + IRR+ G+S+P Sbjct: 63 L------ASCTEQPEGASIYVTLEPCCHYGKQPPCVNAILESGIRRVIIGSSDP 110 >gi|34540017|ref|NP_904496.1| riboflavin biosynthesis protein RibD [Porphyromonas gingivalis W83] gi|34396328|gb|AAQ65395.1| riboflavin biosynthesis protein RibD [Porphyromonas gingivalis W83] Length = 330 Score = 37.0 bits (84), Expect = 0.79, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 9/86 (10%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M ++M A+E AQNA + P VGAV V + +II + + HAE++A Sbjct: 1 MTPDPLYMRRAIELAQNAEGFTSPNPLVGAVLVAHGRIIGEGYHHCAGMP----HAEVIA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCT 84 I + + +L E LYV+LEPC+ Sbjct: 57 IN---SVRDRALLRESTLYVSLEPCS 79 >gi|154482616|ref|ZP_02025064.1| hypothetical protein EUBVEN_00283 [Eubacterium ventriosum ATCC 27560] gi|149736516|gb|EDM52402.1| hypothetical protein EUBVEN_00283 [Eubacterium ventriosum ATCC 27560] Length = 163 Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust. Identities = 40/113 (35%), Positives = 50/113 (44%), Gaps = 33/113 (29%) Query: 15 AQNAALRNEIP---VGAVAVLN-NKIISRAGN------------RNRELKD-------VT 51 A AALR++ P VGA V + NKI+S N NRE D T Sbjct: 20 ASLAALRSKDPNTQVGACIVSDDNKILSMGYNGLPVGCSDDEFPWNRESDDPYDNKYFYT 79 Query: 52 AHAEILAI---RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 H+E+ AI R G L +YVTL PC CA AI I+++ YG Sbjct: 80 THSELNAILNYRGGS-------LEGAKIYVTLFPCNECAKAIIQCGIKKVIYG 125 >gi|295135421|ref|YP_003586097.1| bifunctional riboflavin biosynthesis protein RibD [Zunongwangia profunda SM-A87] gi|294983436|gb|ADF53901.1| bifunctional riboflavin biosynthesis protein RibD [Zunongwangia profunda SM-A87] Length = 348 Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust. Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 17/126 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V N+II ++ K HAE+ A+ + ++++L + +YV+LEPC+ Sbjct: 30 VGSVIVYKNQIIGEGWHQ----KAGEPHAEVNAVN---SVKNRDLLKKSTIYVSLEPCSH 82 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C+ I I+++ +P G + A C ++ G+ EQ ++ Sbjct: 83 FGKTPPCSDLIIAKGIKKVVVATVDPFAEVAGRGIKKLMEAGC----DVTLGVLEQEAQH 138 Query: 140 IIQDFF 145 + + FF Sbjct: 139 LNKRFF 144 >gi|260642492|ref|ZP_05859416.1| riboflavin biosynthesis protein RibD [Bacteroides finegoldii DSM 17565] gi|260621884|gb|EEX44755.1| riboflavin biosynthesis protein RibD [Bacteroides finegoldii DSM 17565] Length = 373 Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M +E A+N L N P VGAV V + +II ++ AHAE+ AIR Sbjct: 34 YMRRCIELAKNG-LCNVAPNPMVGAVIVCDGRIIGEG----YHVRCGEAHAEVNAIR--- 85 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + +L +YV+LEPC+ CA I +I R+ G +P G Q Sbjct: 86 SVKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCRDPFSKVAGRGIQKL 145 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ E+ +I+ F Sbjct: 146 QNA----GREVIVGVLEEECLHLIRRFI 169 >gi|169605061|ref|XP_001795951.1| hypothetical protein SNOG_05546 [Phaeosphaeria nodorum SN15] gi|160706699|gb|EAT86610.2| hypothetical protein SNOG_05546 [Phaeosphaeria nodorum SN15] Length = 393 Score = 37.0 bits (84), Expect = 0.82, Method: Compositional matrix adjust. Identities = 15/42 (35%), Positives = 25/42 (59%) Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 ++D+Y+T EPC MC+ AI +R RR + GG+ + + Sbjct: 296 DLDIYLTNEPCVMCSMAILHSRFRRCIFSTRMSHTGGMTSDS 337 >gi|154250091|ref|YP_001410916.1| riboflavin biosynthesis protein RibD [Fervidobacterium nodosum Rt17-B1] gi|154154027|gb|ABS61259.1| riboflavin biosynthesis protein RibD [Fervidobacterium nodosum Rt17-B1] Length = 365 Score = 37.0 bits (84), Expect = 0.82, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 23/131 (17%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 PVGAV V + KI+S ++ A + A+ G I +YVTLEPC Sbjct: 33 PVGAVIVKDGKILSMGYHKYYGGYHAERDAILSALNAGIDISGST------MYVTLEPCD 86 Query: 85 M------CAAAISLARIRRLYYGASNP---KGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 C I + I+ +Y ++P G G E + + +++ G+ E+ Sbjct: 87 HYGKTPPCTDLIIQSGIKEVYIACTDPNPISGNGAEKLRK--------NGVDVHIGLLEE 138 Query: 136 RSRQIIQDFFK 146 +R++ + FFK Sbjct: 139 EARELAKFFFK 149 >gi|304407004|ref|ZP_07388658.1| riboflavin biosynthesis protein RibD [Paenibacillus curdlanolyticus YK9] gi|304343991|gb|EFM09831.1| riboflavin biosynthesis protein RibD [Paenibacillus curdlanolyticus YK9] Length = 373 Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 52/119 (43%), Gaps = 22/119 (18%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL+ AQ A + I VG V V +II + LK HAE+ A+RM Sbjct: 10 YMRLALQMAQGATGQTSINPVVGCVIVKEGRIIGMGAH----LKRGEGHAEVNALRM--- 62 Query: 65 ILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPK----GGGIEN 112 + + YVTLEPC+ C + ARI R+ A +P G G+E Sbjct: 63 --AGDEAEGATAYVTLEPCSHYRKKTPPCCDRLIEARIARVVVAAQDPNPQVAGTGVEK 119 >gi|313894496|ref|ZP_07828060.1| riboflavin biosynthesis protein RibD [Veillonella sp. oral taxon 158 str. F0412] gi|313440892|gb|EFR59320.1| riboflavin biosynthesis protein RibD [Veillonella sp. oral taxon 158 str. F0412] Length = 404 Score = 37.0 bits (84), Expect = 0.84, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 15/86 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V +N II + K TAHAE+ A+ + + LYVTLEPC+ Sbjct: 28 VGAVVVKDNTIIGEGYHH----KAGTAHAEVHALNQ-----AGDNAKGATLYVTLEPCSH 78 Query: 86 ------CAAAISLARIRRLYYGASNP 105 CA I A I ++ G+++P Sbjct: 79 YGKTPPCALRIIEAGIAKVVVGSTDP 104 >gi|196248758|ref|ZP_03147458.1| riboflavin biosynthesis protein RibD [Geobacillus sp. G11MC16] gi|196211634|gb|EDY06393.1| riboflavin biosynthesis protein RibD [Geobacillus sp. G11MC16] Length = 366 Score = 37.0 bits (84), Expect = 0.84, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 19/108 (17%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL+ A+ A + P VGAV V + I+ + LK HAE+ AIRM Sbjct: 7 YMRLALDVAK-AGVGQTSPNPAVGAVVVNDGTIVGIGAH----LKAGEPHAEVHAIRM-- 59 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + E +YVTLEPC+ CA + A +RR+ ++P Sbjct: 60 ---AGEKARGATVYVTLEPCSHYGKTPPCADLLIEAGVRRVVVATTDP 104 >gi|116252043|ref|YP_767881.1| guanine/cytosine deaminase [Rhizobium leguminosarum bv. viciae 3841] gi|115256691|emb|CAK07779.1| putative guanine/cytosine deaminase [Rhizobium leguminosarum bv. viciae 3841] Length = 195 Score = 37.0 bits (84), Expect = 0.84, Method: Compositional matrix adjust. Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 1/86 (1%) Query: 19 ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78 +L N++ GA + + + N EL++ H E+ ++ + + ++ Sbjct: 27 SLGNKV-FGAAILRKSDLSLVVAETNNELENPLWHGEVHTLKRFYELGDKPPTKDLIFLS 85 Query: 79 TLEPCTMCAAAISLARIRRLYYGASN 104 T EPCTMC +AI+ A YY S+ Sbjct: 86 THEPCTMCMSAITWAGFDNFYYFFSH 111 >gi|329735920|gb|EGG72197.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis VCU045] Length = 347 Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 19/107 (17%) Query: 7 FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GC 63 FM A++ A+ N PVG+V V N +I+ + LK HAE+ AI M G Sbjct: 4 FMDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAH----LKKGDKHAEVQAIEMAGL 59 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASN 104 I YV+LEPCT C I A I ++ Y + Sbjct: 60 NTQGATI------YVSLEPCTHHGSTPPCVHKIIEAGISKVIYAVKD 100 >gi|299538422|ref|ZP_07051705.1| riboflavin biosynthesis protein ribD [Lysinibacillus fusiformis ZC1] gi|298726009|gb|EFI66601.1| riboflavin biosynthesis protein ribD [Lysinibacillus fusiformis ZC1] Length = 370 Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 63/147 (42%), Gaps = 21/147 (14%) Query: 7 FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL+ A +A N P VGAV V N I+ +R K HAE+ A RM Sbjct: 8 YMQLALDLAASAKGNTNPNPLVGAVIVKNGVIVGTGLHR----KAGEPHAEVHAFRM--- 60 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + E LYVTLEPC+ CA + + + R+ +P G Q Sbjct: 61 --AGEHAMGATLYVTLEPCSHYGKTPPCANLVKESGVSRVVVAMQDPNPAVAGRGIQLLQ 118 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145 A + G+ EQ++R++ + F Sbjct: 119 DAGI----VVEVGVLEQQARRLNERFI 141 >gi|209549234|ref|YP_002281151.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534990|gb|ACI54925.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 195 Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust. Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 1/86 (1%) Query: 19 ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78 +L N++ GA + + + N EL + H E+ ++ + + ++ Sbjct: 27 SLGNKV-FGAAILRKSDLSLVVAETNNELDNPLWHGEVHTLKRFYELGEKPATKDLIFLS 85 Query: 79 TLEPCTMCAAAISLARIRRLYYGASN 104 T EPCTMC +AI+ A YY S+ Sbjct: 86 THEPCTMCMSAITWAGFDNFYYFFSH 111 >gi|188994131|ref|YP_001928383.1| putative riboflavin biosynthesis protein [Porphyromonas gingivalis ATCC 33277] gi|188593811|dbj|BAG32786.1| putative riboflavin biosynthesis protein [Porphyromonas gingivalis ATCC 33277] Length = 330 Score = 37.0 bits (84), Expect = 0.86, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 9/86 (10%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M ++M A+E AQNA + P VGAV V + +II + + HAE++A Sbjct: 1 MTPDPLYMRRAIELAQNAEGFTSPNPLVGAVLVAHGRIIGEGYHHCAGMP----HAEVIA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCT 84 I + + +L E LYV+LEPC+ Sbjct: 57 IN---SVRDRALLRESTLYVSLEPCS 79 >gi|58583602|ref|YP_202618.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84625409|ref|YP_452781.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188575147|ref|YP_001912076.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae PXO99A] gi|58428196|gb|AAW77233.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84369349|dbj|BAE70507.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519599|gb|ACD57544.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 151 Score = 37.0 bits (84), Expect = 0.86, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 4/105 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A+ EA+ IP+GA N+ +++ NR + D + H E A R R Sbjct: 10 LLDTAIIEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR- 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 Q + + TL PC C+ + I + G S GGI Sbjct: 69 --QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESLTFQGGI 111 >gi|39996788|ref|NP_952739.1| riboflavin biosynthesis protein RibD [Geobacter sulfurreducens PCA] gi|39983676|gb|AAR35066.1| riboflavin biosynthesis protein RibD [Geobacter sulfurreducens PCA] gi|307634902|gb|ADI84522.2| 2,5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone deaminase and 5-amino-6-(5'-phosphoribosylamino)uracil reductase [Geobacter sulfurreducens KN400] Length = 369 Score = 37.0 bits (84), Expect = 0.86, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 15/86 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V ++ +R K T HAE+ A+R + + D+YVTLEPC+ Sbjct: 29 VGCVIVREGVVVGEGWHR----KAGTPHAEVHALRE-----AGPLARGADVYVTLEPCSH 79 Query: 86 ------CAAAISLARIRRLYYGASNP 105 CA A+ A + R++ G +P Sbjct: 80 FGRTPPCADALVAAGVARVFVGMVDP 105 >gi|170017119|ref|YP_001728038.1| riboflavin biosynthesis protein RibD [Leuconostoc citreum KM20] gi|169803976|gb|ACA82594.1| Riboflavin biosynthesis protein RibD [Leuconostoc citreum KM20] Length = 347 Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 13/86 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGA+ V N +I++ + + AHAEI A + Q + + +YVTLEPC + Sbjct: 28 VGAIIVKNGQILATGYHHSFG----AAHAEINAFE---NLRDQTDIVDSTMYVTLEPCFV 80 Query: 86 ------CAAAISLARIRRLYYGASNP 105 CA AI+ ++R+ G+ +P Sbjct: 81 TGKVGACALAIAQWGVKRVVVGSFDP 106 >gi|255038066|ref|YP_003088687.1| riboflavin biosynthesis protein RibD [Dyadobacter fermentans DSM 18053] gi|254950822|gb|ACT95522.1| riboflavin biosynthesis protein RibD [Dyadobacter fermentans DSM 18053] Length = 354 Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 12/113 (10%) Query: 1 MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ N +M AL+ A A+ VG V V + +II +R HAE+ A Sbjct: 1 METDNQWMERALQLAGYGRGAVSPNPMVGCVIVHDGRIIGEGWHRAYG----GPHAEVRA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 I + +LP+ YVTLEPC+ CA + R++R+ ++P Sbjct: 57 IEDTDARGNSHLLPQATAYVTLEPCSHTGKTPPCADLLVSRRLKRVVICNNDP 109 >gi|71083736|ref|YP_266456.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus Pelagibacter ubique HTCC1062] gi|71062849|gb|AAZ21852.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus Pelagibacter ubique HTCC1062] Length = 351 Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 19/87 (21%) Query: 26 VGAVAVLNNKIIS--RAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 VG V V NNKI+S + G + T HAE AI+ S E + +YVTLEPC Sbjct: 21 VGCVIVKNNKILSIGQTGFKG------TPHAEFNAIKN-----SHENIEGSKMYVTLEPC 69 Query: 84 TM------CAAAISLARIRRLYYGASN 104 + C I +I+ + YG + Sbjct: 70 SHYGKTPPCTNIIIKNKIKEVVYGVED 96 >gi|300743929|ref|ZP_07072949.1| guanine deaminase [Rothia dentocariosa M567] gi|300380290|gb|EFJ76853.1| guanine deaminase [Rothia dentocariosa M567] Length = 163 Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 24 IPVGAVAVLNNKIISRAG-NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 +P V V + +S G NR E D +AHAE++A+R L L L T EP Sbjct: 27 LPFVGVVVQSGVAVSNFGFNRVYETGDASAHAEVVAMRDAMSRLKCSDLSGTVLLATGEP 86 Query: 83 CTMC 86 C +C Sbjct: 87 CGLC 90 >gi|188990100|ref|YP_001902110.1| cytosine deaminase [Xanthomonas campestris pv. campestris str. B100] gi|167731860|emb|CAP50044.1| cytosine deaminase [Xanthomonas campestris pv. campestris] Length = 151 Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 4/106 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A+ EA+ IP+GA ++ +++ NR + D + H E A R R Sbjct: 10 LLDTAIAEARQGLAEGGIPIGAALYHSDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR- 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 Q + + TL PC C+ + I + G S GGI+ Sbjct: 69 --QRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGID 112 >gi|151940847|gb|EDN59229.1| tRNA-specific adenosine deaminase subunit [Saccharomyces cerevisiae YJM789] gi|190405371|gb|EDV08638.1| tRNA-specific adenosine deaminase 3 [Saccharomyces cerevisiae RM11-1a] gi|259148298|emb|CAY81545.1| Tad3p [Saccharomyces cerevisiae EC1118] Length = 322 Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust. Identities = 13/39 (33%), Positives = 26/39 (66%) Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 + D+Y+T EPC+MC+ A+ +R+RR+ + + G ++ Sbjct: 244 DYDVYLTHEPCSMCSMALIHSRVRRVVFLTEMQRTGSLK 282 >gi|149197492|ref|ZP_01874543.1| riboflavin biosynthesis protein RibD [Lentisphaera araneosa HTCC2155] gi|149139510|gb|EDM27912.1| riboflavin biosynthesis protein RibD [Lentisphaera araneosa HTCC2155] Length = 342 Score = 37.0 bits (84), Expect = 0.90, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 12/92 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V + ++I+ ++ K T HAE AI ++ L +YVTLEPC Sbjct: 26 VGAVIVKDGEVIADGWHK----KAGTHHAEKDAITNAKEAGREDDLYGSTIYVTLEPCCT 81 Query: 86 ------CAAAISLARIRRLYYGA--SNPKGGG 109 C I A I ++ YG SNP+ G Sbjct: 82 YGRTEPCTEWIMDAGIAKVVYGCTDSNPEHAG 113 >gi|302408545|ref|XP_003002107.1| FCY1p [Verticillium albo-atrum VaMs.102] gi|261359028|gb|EEY21456.1| FCY1p [Verticillium albo-atrum VaMs.102] Length = 239 Score = 37.0 bits (84), Expect = 0.91, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 20/98 (20%) Query: 25 PVGAVAVLNNKIISRAG------NRNRELKDVTAHAEILAIRMGCRILSQEILP------ 72 P G V ++N+ + R G N + + + H E+ AI IL+ P Sbjct: 70 PFGTV-IVNHTVSGRGGIVCTGENTSHQSGNPIMHGEMAAIANCSHILTDPTGPYNMTVA 128 Query: 73 -------EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 ++ +Y E C MCA+AI A R YG S Sbjct: 129 EALAAFSDLTIYTNAESCPMCASAIRWAGFREYVYGTS 166 >gi|329122085|ref|ZP_08250693.1| riboflavin biosynthesis protein RibD [Dialister micraerophilus DSM 19965] gi|327466892|gb|EGF12408.1| riboflavin biosynthesis protein RibD [Dialister micraerophilus DSM 19965] Length = 378 Score = 37.0 bits (84), Expect = 0.91, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 17/107 (15%) Query: 7 FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +MS AL+ A++ E VGAV V N K++ +++ DV HAE+ A + C+ Sbjct: 9 WMSHALDLAKHGYWYTETNPLVGAVLVKNGKVVGEG--WHKKYGDV--HAEVNAFK-NCK 63 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 E LYVTLEPC C + +++R+ +P Sbjct: 64 ----ENTEHATLYVTLEPCCHYGKTPPCLNLVLQKKVKRVVIAMKDP 106 >gi|317154550|ref|YP_004122598.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio aespoeensis Aspo-2] gi|316944801|gb|ADU63852.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio aespoeensis Aspo-2] Length = 176 Score = 37.0 bits (84), Expect = 0.91, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 5/86 (5%) Query: 22 NEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAE-ILAIRMGCRILSQE--ILPEVDLY 77 E P GAV A + ++ +D T HAE +LA R CR + LY Sbjct: 33 GEGPFGAVVAGPDGMVVMTQQAETIATQDHTRHAEAVLASRF-CRAHYDDPAFRAGSTLY 91 Query: 78 VTLEPCTMCAAAISLARIRRLYYGAS 103 ++EPC MC A+ A I RL YG S Sbjct: 92 SSMEPCAMCMFAMFKAGIGRLVYGLS 117 >gi|37651679|ref|NP_932553.1| Cd [Aeromonas phage 44RR2.8t] gi|66392000|ref|YP_238925.1| cd dCMP deaminase [Aeromonas phage 31] gi|34732979|gb|AAQ81516.1| dCMP deaminase [Aeromonas phage 44RR2.8t] gi|62114837|gb|AAX63685.1| cd dCMP deaminase [Aeromonas phage 31] Length = 172 Score = 37.0 bits (84), Expect = 0.92, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + S + + ++YVT+ PC CA AI+ + I++++Y Sbjct: 85 HAELNAILYAAK--SGQSIDGAEMYVTVSPCRECAKAIAQSGIKKVFY 130 >gi|304373353|ref|YP_003856562.1| deoxycytidylate deaminase [Mycoplasma hyorhinis HUB-1] gi|304309544|gb|ADM22024.1| deoxycytidylate deaminase [Mycoplasma hyorhinis HUB-1] Length = 162 Score = 37.0 bits (84), Expect = 0.93, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Query: 38 SRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96 S+ N+ E+K HAEI AI IL + + LYV+L PC+ CA I+ I Sbjct: 64 SKDSNKASEVKYSYVIHAEINAILNS--ILPLNTVEDAKLYVSLFPCSNCAKVIAQTGIT 121 Query: 97 RLYY 100 +Y+ Sbjct: 122 TIYF 125 >gi|9755339|ref|NP_013420.2| Tad3p [Saccharomyces cerevisiae S288c] gi|23822264|sp|Q9URQ3|TAD3_YEAST RecName: Full=tRNA-specific adenosine deaminase subunit TAD3; AltName: Full=tRNA-specific adenosine-34 deaminase subunit TAD3 gi|6434059|emb|CAB60630.1| tRNA-specific adenosine-34 deaminase subunit Tad3p/ADAT3 [Saccharomyces cerevisiae] gi|285813730|tpg|DAA09626.1| TPA: Tad3p [Saccharomyces cerevisiae S288c] Length = 322 Score = 37.0 bits (84), Expect = 0.94, Method: Compositional matrix adjust. Identities = 13/39 (33%), Positives = 26/39 (66%) Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 + D+Y+T EPC+MC+ A+ +R+RR+ + + G ++ Sbjct: 244 DYDVYLTHEPCSMCSMALIHSRVRRVVFLTEMQRTGSLK 282 >gi|257899304|ref|ZP_05678957.1| riboflavin specific deaminase [Enterococcus faecium Com15] gi|257837216|gb|EEV62290.1| riboflavin specific deaminase [Enterococcus faecium Com15] Length = 364 Score = 37.0 bits (84), Expect = 0.95, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 26/154 (16%) Query: 1 MKKGNV-----FMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA 52 M KG + FM A+ EA+ N + VGA V K+IS + L + Sbjct: 1 MLKGGIYMHQSFMLAAIAEAKKGKGNTFTNPL-VGAAIVKEGKLISLGAH----LHYGES 55 Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK 106 HAE+ AI+ C S E L LYVTLEPC C AI + I + G +P Sbjct: 56 HAEVNAIQ-NCS--SPEELFNSTLYVTLEPCNHQGKQPPCTQAIVQSGITTVVIGQLDPN 112 Query: 107 GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 G +F H ++ G+ E++ R + Sbjct: 113 PLVAGKGREFLQ----KHGIKVIVGVEEEKCRAL 142 >gi|21232920|ref|NP_638837.1| cytosine deaminase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767007|ref|YP_241769.1| cytosine deaminase [Xanthomonas campestris pv. campestris str. 8004] gi|21114755|gb|AAM42761.1| cytosine deaminase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572339|gb|AAY47749.1| cytosine deaminase [Xanthomonas campestris pv. campestris str. 8004] Length = 151 Score = 37.0 bits (84), Expect = 0.95, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 4/106 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A+ EA+ IP+GA ++ +++ NR + D + H E A R R Sbjct: 10 LLDTAIAEARQGLAEGGIPIGAALYHSDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR- 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 Q + + TL PC C+ + I + G S GGI+ Sbjct: 69 --QRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGID 112 >gi|242243028|ref|ZP_04797473.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus epidermidis W23144] gi|242233486|gb|EES35798.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus epidermidis W23144] Length = 343 Score = 37.0 bits (84), Expect = 0.95, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 17/87 (19%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GCRILSQEILPEVDLYVTLEPC 83 PVG+V V N +I+ + LK HAE+ AI M G + I YV+LEPC Sbjct: 20 PVGSVVVKNGRIVGLGAH----LKKGDKHAEVQAIEMAGLKAQGATI------YVSLEPC 69 Query: 84 TM------CAAAISLARIRRLYYGASN 104 T C I A I ++ Y + Sbjct: 70 THHGSTPPCVDKIIEAGISKVIYAVKD 96 >gi|218516842|ref|ZP_03513682.1| putative guanine/cytosine deaminase protein [Rhizobium etli 8C-3] Length = 195 Score = 37.0 bits (84), Expect = 0.96, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 30/61 (49%) Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 N EL++ H E+ ++ + + ++ T EPCTMC +AI+ A YY S Sbjct: 51 NNELENPLWHGEVHTLKRFYELGDKPATRDLIFLSTHEPCTMCMSAITWAGFDNFYYFFS 110 Query: 104 N 104 + Sbjct: 111 H 111 >gi|91202314|emb|CAJ75374.1| strongly similar to riboflavin biosynthesis protein RibD [Candidatus Kuenenia stuttgartiensis] Length = 367 Score = 37.0 bits (84), Expect = 0.96, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 17/82 (20%) Query: 7 FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG-- 62 +M+ ALE A+ + P VGAV V NN+I+ + ++N AHAEI AI G Sbjct: 11 YMTLALELAEKGRGMVEPNPMVGAVIVKNNEIVGKGYHKNYG----GAHAEIHAINEGGV 66 Query: 63 -CRILSQEILPEVDLYVTLEPC 83 C+ LYVT+EPC Sbjct: 67 NCK--------GATLYVTMEPC 80 >gi|224025262|ref|ZP_03643628.1| hypothetical protein BACCOPRO_01999 [Bacteroides coprophilus DSM 18228] gi|224018498|gb|EEF76496.1| hypothetical protein BACCOPRO_01999 [Bacteroides coprophilus DSM 18228] Length = 306 Score = 37.0 bits (84), Expect = 0.97, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 39/162 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-----SRAGNRNRELKDVTA 52 M K ++ ++ A+N L N P VGAV V ++II +R G Sbjct: 1 MTKDEKYIRRCIQLARNG-LCNAAPNPMVGAVVVYRDRIIGEGYHARCGE---------G 50 Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP- 105 HAE+ A+R + + +L E LYV+LEPC+ CA I I R+ G +P Sbjct: 51 HAEVNALR---SVRDESLLKEATLYVSLEPCSHYGKTPPCADLIVSKGIPRVVVGCMDPF 107 Query: 106 ---KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G GI + T G+ E+ R++I+ F Sbjct: 108 PLVAGRGIRKLEEAGIDVTV--------GVLEEECRELIRRF 141 >gi|256078948|ref|XP_002575754.1| cytidine deaminase; dCTP deaminase [Schistosoma mansoni] gi|238661001|emb|CAZ31988.1| cytidine deaminase [Schistosoma mansoni] Length = 655 Score = 37.0 bits (84), Expect = 0.98, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 D Y +LEPC MC A+ RIRR++ G N ++ + +H ++ Sbjct: 598 DAYFSLEPCLMCGMALLHNRIRRVFCCQKLAGDGAFTNASRLHVQEQLNHRFRVF 652 >gi|258405543|ref|YP_003198285.1| riboflavin biosynthesis protein RibD [Desulfohalobium retbaense DSM 5692] gi|257797770|gb|ACV68707.1| riboflavin biosynthesis protein RibD [Desulfohalobium retbaense DSM 5692] Length = 384 Score = 37.0 bits (84), Expect = 0.98, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 44/102 (43%), Gaps = 18/102 (17%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK 106 HAE+ AI R + L E L+VTLEPC C AI A IR + G +P Sbjct: 44 HAEVEAIAQ-ARAAGVD-LSECTLWVTLEPCNHHGRTPPCTKAIIEAGIRSVGIGTLDPN 101 Query: 107 ---GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 GGG GT F E+ GI E R +I DF Sbjct: 102 PHVGGG---GTAFLR----DQGVEVEVGILEPACRDLIADFL 136 >gi|72162124|ref|YP_289781.1| hypothetical protein Tfu_1723 [Thermobifida fusca YX] gi|71915856|gb|AAZ55758.1| conserved hypothetical protein [Thermobifida fusca YX] Length = 163 Score = 37.0 bits (84), Expect = 0.98, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 39/93 (41%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71 +E A A + P G+V V + + + D T H E R R L+ Sbjct: 14 VELAAQALEAGDEPFGSVLVAGDGTVLAEDHNRVASGDRTRHPEFALARWAVRNLTPNER 73 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 E +Y + E C MCAAA + R+ Y +S+ Sbjct: 74 AEATVYTSGEHCPMCAAAHGWVGLGRIVYASSS 106 >gi|170088388|ref|XP_001875417.1| predicted protein [Laccaria bicolor S238N-H82] gi|164650617|gb|EDR14858.1| predicted protein [Laccaria bicolor S238N-H82] Length = 164 Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 7/43 (16%) Query: 70 ILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNP 105 IL + D+Y TLEPC++ C AA+ A++RR + G + P Sbjct: 84 ILSQSDVYTTLEPCSIRTSGLAPCVAALIGAKVRRCFIGVAEP 126 >gi|156976611|ref|YP_001447517.1| deoxycytidylate deaminase [Vibrio harveyi ATCC BAA-1116] gi|156528205|gb|ABU73290.1| hypothetical protein VIBHAR_05385 [Vibrio harveyi ATCC BAA-1116] Length = 168 Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN------------RNRELKDV-TAHAEILAIRMGCRILSQEILP 72 VGAV NN+I+S N RELK + T HAE AI + S+ L Sbjct: 43 VGAVITKNNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 97 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 D++VT PC CAA I I R+ Sbjct: 98 GCDIWVTHFPCPNCAAKIIQTGIARV 123 >gi|327189580|gb|EGE56732.1| putative guanine/cytosine deaminase protein [Rhizobium etli CNPAF512] Length = 195 Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 30/61 (49%) Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 N EL++ H E+ ++ + + ++ T EPCTMC +AI+ A YY S Sbjct: 51 NNELENPLWHGEVHTLKRFYELGDKPATRDLIFLSTHEPCTMCMSAITWAGFDNFYYFFS 110 Query: 104 N 104 + Sbjct: 111 H 111 >gi|212528944|ref|XP_002144629.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224] gi|210074027|gb|EEA28114.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224] Length = 162 Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 1/91 (1%) Query: 15 AQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73 A+ A + P G+V V +II NR DVT H E + L+Q Sbjct: 17 AREALEAGDAPFGSVLVNAAGEIIKEDRNRVVTQADVTWHPEFTLAGWAQKNLTQTERAA 76 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +Y + E C MCA A + A + R+ Y +S+ Sbjct: 77 ATVYTSGEHCPMCATAHAYAGLGRIVYASSS 107 >gi|29349136|ref|NP_812639.1| riboflavin biosynthesis protein ribD [Bacteroides thetaiotaomicron VPI-5482] gi|29341044|gb|AAO78833.1| riboflavin biosynthesis protein ribD [Bacteroides thetaiotaomicron VPI-5482] Length = 339 Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 17/125 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V + II + ++ AHAE+ AIR + + +L +YV+LEPC+ Sbjct: 21 VGAVIVCDGLIIGEGYH----IRCGEAHAEVNAIR---SVKDKSLLSRSTIYVSLEPCSH 73 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I +I R+ G +P G Q A E+ G+ E+ R Sbjct: 74 YGKTPPCADLIIEKQIPRIVIGCQDPFSQVAGRGIQKLRDA----GREVTVGVLEKECRY 129 Query: 140 IIQDF 144 +I+ F Sbjct: 130 LIRRF 134 >gi|1078080|pir||S53395 hypothetical protein YLR316c - yeast (Saccharomyces cerevisiae) Length = 299 Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust. Identities = 13/39 (33%), Positives = 26/39 (66%) Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 + D+Y+T EPC+MC+ A+ +R+RR+ + + G ++ Sbjct: 221 DYDVYLTHEPCSMCSMALIHSRVRRVVFLTEMQRTGSLK 259 >gi|302691412|ref|XP_003035385.1| hypothetical protein SCHCODRAFT_51868 [Schizophyllum commune H4-8] gi|300109081|gb|EFJ00483.1| hypothetical protein SCHCODRAFT_51868 [Schizophyllum commune H4-8] Length = 163 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 7/46 (15%) Query: 68 QEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPK 106 +IL +VD+Y TLEPC++ CA A+ A +RR + G P Sbjct: 82 DDILRQVDVYTTLEPCSIRTSGLAPCADALIAAGVRRCFIGVGEPD 127 >gi|190891665|ref|YP_001978207.1| guanine/cytosine deaminase [Rhizobium etli CIAT 652] gi|190696944|gb|ACE91029.1| putative guanine/cytosine deaminase protein [Rhizobium etli CIAT 652] Length = 195 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 30/61 (49%) Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 N EL++ H E+ ++ + + ++ T EPCTMC +AI+ A YY S Sbjct: 51 NNELENPLWHGEVHTLKRFYELGDKPATRDLIFLSTHEPCTMCMSAITWAGFDNFYYFFS 110 Query: 104 N 104 + Sbjct: 111 H 111 >gi|194333661|ref|YP_002015521.1| riboflavin biosynthesis protein RibD [Prosthecochloris aestuarii DSM 271] gi|194311479|gb|ACF45874.1| riboflavin biosynthesis protein RibD [Prosthecochloris aestuarii DSM 271] Length = 373 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 27/152 (17%) Query: 7 FMSCALEEA-QNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M LE A + A L + P VG+V V+ ++++ + HAE+ A+ Sbjct: 14 YMHRCLELARKGAGLVSPNPMVGSVIVVEDRVVGEGFHERYG----GPHAEVNAL---AS 66 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIENGT 114 + +LP LYV LEPC+ C+ I +IRR+ G +P G GIE Sbjct: 67 VSDASLLPSSTLYVNLEPCSHYGKTPPCSDLIISKKIRRVVVGCLDPHEKVAGKGIEKLR 126 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q E+ G+ ++ S + + F K Sbjct: 127 QAGV--------EVTIGVLQRESEALNEAFIK 150 >gi|153832876|ref|ZP_01985543.1| deoxycytidylate deaminase [Vibrio harveyi HY01] gi|148870799|gb|EDL69698.1| deoxycytidylate deaminase [Vibrio harveyi HY01] Length = 152 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN------------RNRELKDV-TAHAEILAIRMGCRILSQEILP 72 VGAV NN+I+S N RELK + T HAE AI + S+ L Sbjct: 27 VGAVITKNNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 D++VT PC CAA I I R+ Sbjct: 82 GCDIWVTHFPCPNCAAKIIQTGIARV 107 >gi|115399304|ref|XP_001215241.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114192124|gb|EAU33824.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 165 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 1/94 (1%) Query: 12 LEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 +E A+ A + P G+V V I+ NR DVT H E+ + LSQ Sbjct: 14 VELAREALQAGDAPFGSVLVDAAGNILKEDRNRTVTDADVTLHPELTLALWAQKNLSQNE 73 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +Y + E C MCAA + + R+ Y +S+ Sbjct: 74 RATATVYTSGEHCPMCAAVHANVGLGRIVYASSS 107 >gi|269960107|ref|ZP_06174484.1| deoxycytidylate deaminase, putative [Vibrio harveyi 1DA3] gi|269835406|gb|EEZ89488.1| deoxycytidylate deaminase, putative [Vibrio harveyi 1DA3] Length = 152 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN------------RNRELKDV-TAHAEILAIRMGCRILSQEILP 72 VGAV NN+I+S N RELK + T HAE AI + S+ L Sbjct: 27 VGAVITKNNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 D++VT PC CAA I I R+ Sbjct: 82 GCDIWVTHFPCPNCAAKIIQTGIARV 107 >gi|149247534|ref|XP_001528176.1| hypothetical protein LELG_00696 [Lodderomyces elongisporus NRRL YB-4239] gi|146448130|gb|EDK42518.1| hypothetical protein LELG_00696 [Lodderomyces elongisporus NRRL YB-4239] Length = 360 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 22/38 (57%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 +Y T EPC MC+ A+ +RI R Y GGG+E+ Sbjct: 284 VYTTHEPCVMCSMALVHSRIVRCTYLKPVANGGGMESS 321 >gi|148544108|ref|YP_001271478.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Lactobacillus reuteri DSM 20016] gi|184153479|ref|YP_001841820.1| riboflavin biosynthesis protein [Lactobacillus reuteri JCM 1112] gi|148531142|gb|ABQ83141.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Lactobacillus reuteri DSM 20016] gi|183224823|dbj|BAG25340.1| riboflavin biosynthesis protein [Lactobacillus reuteri JCM 1112] Length = 352 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 20/109 (18%) Query: 7 FMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A+ EA A NE VGAV V N ++++R E + HAE AI Sbjct: 6 FMQMAIAEAAKAG--NETWKNPRVGAVVVKNGQVLARG--HTHEYGGI--HAERDAIGK- 58 Query: 63 CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 L+ + LYVTLEPC C+ AI A IRR+ ++P Sbjct: 59 ---LTPKQGQGATLYVTLEPCNHYGKQPPCSQAIIDAGIRRVVIAETDP 104 >gi|294054578|ref|YP_003548236.1| riboflavin biosynthesis protein RibD [Coraliomargarita akajimensis DSM 45221] gi|293613911|gb|ADE54066.1| riboflavin biosynthesis protein RibD [Coraliomargarita akajimensis DSM 45221] Length = 369 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 50/116 (43%), Gaps = 18/116 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V + I++ + HAEI A+ R + + + LYVTLEPC+ Sbjct: 32 VGAVIVEDGAIVAEGWHTAAG----QPHAEIEALAALGRAPASDAV----LYVTLEPCST 83 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 C AI A I+ + GA++P NG A H + GI EQ Sbjct: 84 SGRTGACTDAILRAGIQNVVIGATDPNPDHAGNGLDLLREAGVH----VQAGILEQ 135 >gi|257453179|ref|ZP_05618478.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Fusobacterium sp. 3_1_5R] gi|317059713|ref|ZP_07924198.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium sp. 3_1_5R] gi|313685389|gb|EFS22224.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium sp. 3_1_5R] Length = 359 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 17/107 (15%) Query: 7 FMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M ALE A++ R N P VGAV V N KII + + HAE+ A++ Sbjct: 6 YMHLALELAKHGEGRVNPNPLVGAVVVKNGKIIGKGYHHEYG----GPHAEVFALQE--- 58 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + E +YVTLEPC+ CA I + I+R +P Sbjct: 59 --AGEEAKGATIYVTLEPCSHYGKTPPCAKKIIDSGIKRCVISMGDP 103 >gi|86357578|ref|YP_469470.1| deoxycytidylate deaminase family protein [Rhizobium etli CFN 42] gi|86281680|gb|ABC90743.1| probable deoxycytidylate deaminase family protein [Rhizobium etli CFN 42] Length = 195 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 29/61 (47%) Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 N EL + H E+ ++ + + ++ T EPCTMC +AI+ A YY S Sbjct: 51 NNELDNPLWHGEVHTLKRFYELGDKPQTKDLIFLSTHEPCTMCMSAITWAGFDNFYYFFS 110 Query: 104 N 104 + Sbjct: 111 H 111 >gi|71027665|ref|XP_763476.1| hypothetical protein [Theileria parva strain Muguga] gi|68350429|gb|EAN31193.1| hypothetical protein, conserved [Theileria parva] Length = 312 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 16/119 (13%) Query: 29 VAVLNNKIISRAGNRNRELKDVTAHAEILAI----RMGCRILSQEI--LPEV-----DLY 77 + +K+IS A + R++ ++ HA ILA+ + +Q+I P+ ++Y Sbjct: 181 IITFKDKVISTAFDE-RDV-NILKHASILAVNKIAEAKKKRETQKIKDYPDYLCTGCEVY 238 Query: 78 VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH---SPEIYPGIS 133 ++ EPC MC A+ +RI ++ YG N K G + + + +H + + P IS Sbjct: 239 LSHEPCCMCGMALLHSRISKVIYGIKNHKLGCFGSVWNLHNMIELNHRFRAFTVTPNIS 297 >gi|227364534|ref|ZP_03848595.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Lactobacillus reuteri MM2-3] gi|325682351|ref|ZP_08161868.1| riboflavin specific deaminase [Lactobacillus reuteri MM4-1A] gi|227070371|gb|EEI08733.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Lactobacillus reuteri MM2-3] gi|324978190|gb|EGC15140.1| riboflavin specific deaminase [Lactobacillus reuteri MM4-1A] Length = 355 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 20/109 (18%) Query: 7 FMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A+ EA A NE VGAV V N ++++R E + HAE AI Sbjct: 9 FMQMAIAEAAKAG--NETWKNPRVGAVVVKNGQVLARG--HTHEYGGI--HAERDAIGK- 61 Query: 63 CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 L+ + LYVTLEPC C+ AI A IRR+ ++P Sbjct: 62 ---LTPKQGQGATLYVTLEPCNHYGKQPPCSQAIIDAGIRRVVIAETDP 107 >gi|170076474|ref|YP_001733112.1| hypothetical protein SYNPCC7002_G0004 [Synechococcus sp. PCC 7002] gi|169887336|gb|ACB01044.1| Conserved hypothetical protein, with zinc-binding domain [Synechococcus sp. PCC 7002] Length = 191 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%) Query: 53 HAEILAIRMGCRILSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 HAE++AI + +Q+ L P ++L + EPC MC I + ++R+ GA Sbjct: 81 HAEMVAIAIAQHKFNQDNLSTANLPALELIASTEPCGMCLGGIHWSNLKRVVSGA 135 >gi|281210887|gb|EFA85053.1| hypothetical protein PPL_02049 [Polysphondylium pallidum PN500] Length = 234 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 2/86 (2%) Query: 18 AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLY 77 A + I + N + N+N K H EI+AI I ++ LY Sbjct: 57 AVAKKSIFTTVIVAPNGTVACTGLNQNE--KSAIYHGEIVAILNCSAIYNKNTWEGYSLY 114 Query: 78 VTLEPCTMCAAAISLARIRRLYYGAS 103 T E C MC AA A ++ YG S Sbjct: 115 TTGESCAMCQAAAMWAGFDQIIYGTS 140 >gi|320546418|ref|ZP_08040733.1| riboflavin biosynthesis protein RibD [Streptococcus equinus ATCC 9812] gi|320448803|gb|EFW89531.1| riboflavin biosynthesis protein RibD [Streptococcus equinus ATCC 9812] Length = 351 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 17/108 (15%) Query: 7 FMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A+EEA+ N + VGAV V +N +I+R + L+ HAE AI + C Sbjct: 5 YMLQAIEEAKRGFRQTYTNPL-VGAVIVKDNHVIARGAH----LQYGHEHAEKNAI-LHC 58 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + + E L LYVTLEPC C AI I+++ G +P Sbjct: 59 Q--TPEELFNSTLYVTLEPCHHGGKQPPCTQAIVEVGIKKVVAGQFDP 104 >gi|148262423|ref|YP_001229129.1| CMP/dCMP deaminase, zinc-binding [Geobacter uraniireducens Rf4] gi|146395923|gb|ABQ24556.1| CMP/dCMP deaminase, zinc-binding protein [Geobacter uraniireducens Rf4] Length = 196 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 15/30 (50%), Positives = 19/30 (63%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASN 104 DL+ T EPC MC AI + +RRL GA + Sbjct: 106 DLFATTEPCAMCFGAIPWSGVRRLVCGARD 135 >gi|305667257|ref|YP_003863544.1| putative riboflavin biosynthesis protein [Maribacter sp. HTCC2170] gi|88709304|gb|EAR01537.1| putative riboflavin biosynthesis protein [Maribacter sp. HTCC2170] Length = 350 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 49/111 (44%), Gaps = 17/111 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M +++M AL A+N L P VGAV V N KII+ AHAE+ Sbjct: 1 MSLDHLYMQRALLLAKNG-LGTTAPNPMVGAVLVCNEKIIAEGYTSPYG----GAHAEVN 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGA 102 AI + + IL LYVTLEPC+ CA I I R+ G Sbjct: 56 AIN---SVEDKSILANSTLYVTLEPCSHHGKTPPCADLIIKHNIPRVVIGT 103 >gi|325299195|ref|YP_004259112.1| riboflavin biosynthesis protein RibD [Bacteroides salanitronis DSM 18170] gi|324318748|gb|ADY36639.1| riboflavin biosynthesis protein RibD [Bacteroides salanitronis DSM 18170] Length = 356 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M + ++S ++ A+N L N P VGAV V ++II ++ HAE+ Sbjct: 1 MTQDEKYISRCIQLAKNG-LCNTPPNPMVGAVIVYQDRIIGEG----YHIRCGEGHAEVN 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 AI + + +L + LYV+LEPC+ CA I I R+ G ++P Sbjct: 56 AI---ASVKDESLLRQSTLYVSLEPCSHYGKTPPCADLIIRKGIPRVVVGCTDPFPLVSG 112 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ EQ + +I+ F Sbjct: 113 RGIQKLRDAGV----EVKVGVLEQECKDLIRRF 141 >gi|157691490|ref|YP_001485952.1| bifunctional 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus pumilus SAFR-032] gi|157680248|gb|ABV61392.1| bifunctional 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus pumilus SAFR-032] Length = 361 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 21/115 (18%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 MK +M A+ A+ A++ + VGAV V +I+ + +K HAEI Sbjct: 1 MKDDVFYMELAIANAK--AMKGQTSPNPLVGAVIVQQGEIVGMGAH----MKAGEPHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 A++M ++E LYVTLEPC+ C AI + ++R+ +P Sbjct: 55 HALQM-----AREKAKGAHLYVTLEPCSHYGKTGPCTEAIIKSGVKRVVIATQDP 104 >gi|294141969|ref|YP_003557947.1| riboflavin biosynthesis protein RibD [Shewanella violacea DSS12] gi|293328438|dbj|BAJ03169.1| riboflavin biosynthesis protein RibD [Shewanella violacea DSS12] Length = 379 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 12/107 (11%) Query: 7 FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FMS A++ A+ R VG V L+++I+ + ++ HAE+ A+ M + Sbjct: 9 FMSRAIKLARRGLYTTRPNPCVGCVITLDDQILGEGFH----IQAGGPHAEVHALAMATK 64 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 SQ L YVTLEPC+ CA A+ I R+ +P Sbjct: 65 RASQAALKGATAYVTLEPCSHYGRTPPCAEALIKHGISRVVVAVEDP 111 >gi|332672108|ref|YP_004455116.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas fimi ATCC 484] gi|332341146|gb|AEE47729.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas fimi ATCC 484] Length = 161 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 2/94 (2%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR-ELKDVTAHAEILAIRMGCRILSQEI 70 LE A+ A + P G+V V + A +RNR + D T H E+ R L E Sbjct: 15 LELAREALDDGDEPFGSVLVDAGGTVLLA-DRNRVKDGDGTRHPELEIARWAAAHLPVEE 73 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +Y + E C MCAAA A + R+ Y AS+ Sbjct: 74 RAGCTVYTSGEHCPMCAAAHGWAGLGRIVYVASS 107 >gi|315646375|ref|ZP_07899493.1| riboflavin biosynthesis protein RibD [Paenibacillus vortex V453] gi|315278018|gb|EFU41338.1| riboflavin biosynthesis protein RibD [Paenibacillus vortex V453] Length = 366 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GCR 64 +MS AL+ A+ A + I PV ++ N ++ G L+ T HAEI A+ M G + Sbjct: 9 YMSLALDLAERAQGQTGINPVVGCVIVKNGALAGVGTH---LERGTPHAEIHALNMAGTK 65 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + YVTLEPC+ C+ + ++R+ +P G Q Sbjct: 66 AAGSTV------YVTLEPCSHYGATPPCSERLIAEGVKRVVVACEDPNPLVAGKGIQMLR 119 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ GI +R+ ++ + F K Sbjct: 120 AAGI----EVVTGILRERALRLNEAFIK 143 >gi|281212623|gb|EFA86783.1| hypothetical protein PPL_00588 [Polysphondylium pallidum PN500] Length = 217 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 2/83 (2%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 +N + + N + N+N H E++AI RI ++ LY T Sbjct: 60 KNNLFTTVIVAPNGTVACTGLNQNE--NSAIYHGEMVAIMNCSRIHNKNTWEGYSLYTTG 117 Query: 81 EPCTMCAAAISLARIRRLYYGAS 103 E C MC AA A ++ YG S Sbjct: 118 ESCVMCHAAAMWAGFSKVIYGTS 140 >gi|312139813|ref|YP_004007149.1| cytidine/deoxycytidylate deaminase [Rhodococcus equi 103S] gi|311889152|emb|CBH48465.1| putative cytidine/deoxycytidylate deaminase [Rhodococcus equi 103S] Length = 166 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 2/94 (2%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEI 70 +E A A L + P G+V + + A +RNR D T H E R LS E Sbjct: 22 VELAAEALLAGDEPFGSVLATADGT-AVAEDRNRIADGDSTRHPEFELARWAAENLSAEE 80 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +Y + E C MCAAA + + R+ Y AS Sbjct: 81 RAGATVYTSGEHCPMCAAAHAWVGLGRIVYVAST 114 >gi|306820099|ref|ZP_07453747.1| riboflavin biosynthesis protein RibD [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551877|gb|EFM39820.1| riboflavin biosynthesis protein RibD [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 365 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 19/108 (17%) Query: 7 FMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A++ A+N R N I VGAV V +N+II R + K AHAE+ A+ C Sbjct: 9 YMKLAIDLAKNGIGRTSPNPI-VGAVIVKDNQIIGRGWHE----KYGEAHAEVNALD-NC 62 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 ++ +YVTLEPC C + I + I + G+ +P Sbjct: 63 QVSPNG----ATMYVTLEPCCHFGKQPPCTSKIIESGISHVVIGSFDP 106 >gi|330858731|ref|YP_004415106.1| putative deoxycytidylate deaminase [Shigella phage Shfl2] gi|327397665|gb|AEA73167.1| putative deoxycytidylate deaminase [Shigella phage Shfl2] Length = 193 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI R S + +YVTL PC CA AI+ + I++L Y Sbjct: 104 HAELNAILFAARNGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVY 149 >gi|309791156|ref|ZP_07685688.1| hypothetical protein OSCT_1639 [Oscillochloris trichoides DG6] gi|308226718|gb|EFO80414.1| hypothetical protein OSCT_1639 [Oscillochloris trichoides DG6] Length = 196 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 5/61 (8%) Query: 51 TAHAEILAI-----RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 +AHAEI+A+ R+G L LP + + PC MC A+ + +R + + P Sbjct: 80 SAHAEIMALSLAQHRLGTYDLGAAGLPTHQIVINWRPCAMCFGALLWSGVRSVVIAGAGP 139 Query: 106 K 106 + Sbjct: 140 E 140 >gi|331270609|ref|YP_004397101.1| riboflavin biosynthesis protein RibD [Clostridium botulinum BKT015925] gi|329127159|gb|AEB77104.1| riboflavin biosynthesis protein RibD [Clostridium botulinum BKT015925] Length = 372 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 19/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V +NKII ++ HAEI A++ +E + +YVTLEPC+ Sbjct: 26 VGAVIVKDNKIIGEGYHQYFG----ENHAEINALKN-----VKEDVNGATMYVTLEPCSH 76 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA AI + I+++ G +P G + ++ E+ G+ E+ ++ Sbjct: 77 YGKTPPCANAIVKSGIKKVIIGMRDPNSLVAGRGIRILK----NNGIEVIQGVLEEEIKK 132 Query: 140 IIQDFFK 146 + + F K Sbjct: 133 VNEIFIK 139 >gi|256839100|ref|ZP_05544610.1| riboflavin biosynthesis protein RibD [Parabacteroides sp. D13] gi|256740019|gb|EEU53343.1| riboflavin biosynthesis protein RibD [Parabacteroides sp. D13] Length = 359 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 17/126 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V +II +R K AHAE+ AI + + +L + +YV+LEPC+ Sbjct: 29 VGAVVVHKGRIIGEGFHR----KCGEAHAEVNAI---ASVKDESLLKDSTIYVSLEPCSH 81 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I I R+ G +P G + A E+ G+ E+ +R Sbjct: 82 YGKTPPCAELIIRKGIPRVVVGCLDPFPEVSGRGVRMLREAGV----EVVTGVMEEEARA 137 Query: 140 IIQDFF 145 + + F Sbjct: 138 LNKAFM 143 >gi|331005895|ref|ZP_08329246.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [gamma proteobacterium IMCC1989] gi|330420291|gb|EGG94606.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [gamma proteobacterium IMCC1989] Length = 397 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 50/158 (31%), Positives = 70/158 (44%), Gaps = 36/158 (22%) Query: 7 FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIIS-----RAGNRNRELKDVTAHAEILAI 59 FMS A++ A+ R VG V V N ++IS RAG AHAEI A+ Sbjct: 10 FMSLAIQLAEKGRYTTRPNPCVGCVLVKNGQVISEGWHYRAGE---------AHAEIHAL 60 Query: 60 RMGCRILSQEILPE-VDLYVTLEPCT------MCAAAI---SLARIRRLYYGASNPKGGG 109 + L E+ E + YVTLEPC+ CA A+ + I R+ YG +P Sbjct: 61 QQ----LPIEVKAENITAYVTLEPCSHQGRTGSCAMALADRTNTGIIRVVYGMEDPNPLV 116 Query: 110 IENGTQFYTLATCHHSPEIYPG-ISEQRSRQIIQDFFK 146 G LA S + G + EQ++ + Q FF+ Sbjct: 117 AGKG-----LAILRESGCVVEGPLMEQQAAALNQGFFR 149 >gi|301308353|ref|ZP_07214307.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 20_3] gi|300833823|gb|EFK64439.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 20_3] Length = 359 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 17/126 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V +II +R K AHAE+ AI + + +L + +YV+LEPC+ Sbjct: 29 VGAVVVHKGRIIGEGFHR----KCGEAHAEVNAI---ASVKDESLLKDSTIYVSLEPCSH 81 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I I R+ G +P G + A E+ G+ E+ +R Sbjct: 82 YGKTPPCAELIIRKGIPRVVVGCLDPFPEVSGRGVRMLREAGV----EVVTGVMEEEARA 137 Query: 140 IIQDFF 145 + + F Sbjct: 138 LNKAFM 143 >gi|9632715|ref|NP_049828.1| Cd dCMP deaminase [Enterobacteria phage T4] gi|118398|sp|P16006|DCTD_BPT4 RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP deaminase; Short=dCD gi|5354339|gb|AAD42546.1|AF158101_133 Cd dCMP deaminase [Enterobacteria phage T4] gi|215838|gb|AAA32489.1| deoxycytidylate deaminase (EC 3.5.4.12) [Enterobacteria phage T4] gi|299780576|gb|ADJ39938.1| deoxycytidylate deaminase [Enterobacteria phage T4T] Length = 193 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI R S + +YVTL PC CA AI+ + I++L Y Sbjct: 104 HAELNAILFAARNGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVY 149 >gi|303238038|ref|ZP_07324581.1| riboflavin biosynthesis protein RibD [Prevotella disiens FB035-09AN] gi|302481828|gb|EFL44880.1| riboflavin biosynthesis protein RibD [Prevotella disiens FB035-09AN] Length = 335 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 18/122 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + ++M L+ A+N L N P VGAV V ++ I G R + HAE+ A Sbjct: 8 RDEMYMCRCLQLAKNGRL-NAKPNPMVGAVIVSHDGKIIGEGYHVRCGE---GHAEVNAF 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGG 109 R + +L E +YV+LEPC+ CA I +RR+ G +P +G G Sbjct: 64 H-SVRPTDEHLLSESTIYVSLEPCSHYGKTPPCADLIVRKGVRRMVCGCVDPFSEVQGRG 122 Query: 110 IE 111 IE Sbjct: 123 IE 124 >gi|189462016|ref|ZP_03010801.1| hypothetical protein BACCOP_02688 [Bacteroides coprocola DSM 17136] gi|189431230|gb|EDV00215.1| hypothetical protein BACCOP_02688 [Bacteroides coprocola DSM 17136] Length = 344 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 17/125 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V N++II ++ HAE+ AIR + + +L + +YV+LEPC+ Sbjct: 28 VGAVIVCNDRIIGEG----YHVRCGEGHAEVNAIR---SVKDESLLKKSTIYVSLEPCSH 80 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I I R+ G +P G Q A E+ G+ E R Sbjct: 81 YGKTPPCADLIISKGIPRVVVGCVDPFSLVSGRGIQKLRDAGI----EVTVGVLENECRA 136 Query: 140 IIQDF 144 +I+ F Sbjct: 137 LIKRF 141 >gi|116326433|ref|YP_803153.1| dCMP deaminase [Enterobacteria phage RB32] gi|228861145|ref|YP_002854168.1| dCMP deaminase [Enterobacteria phage RB51] gi|228861526|ref|YP_002854547.1| dCMP deaminase [Enterobacteria phage RB14] gi|115344026|gb|ABI95035.1| dCMP deaminase [Enterobacteria phage RB32] gi|227438542|gb|ACP30855.1| dCMP deaminase [Enterobacteria phage RB14] gi|227438819|gb|ACP31131.1| dCMP deaminase [Enterobacteria phage RB51] gi|291290435|dbj|BAI83230.1| dCMP deaminase [Enterobacteria phage AR1] Length = 193 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI R S + +YVTL PC CA AI+ + I++L Y Sbjct: 104 HAELNAILFAARNGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVY 149 >gi|34558827|gb|AAQ75171.1| riboflavin biosynthesis protein [Alvinella pompejana epibiont 7G3] Length = 335 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 37/144 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M ++FM A++ A L VGA+ LN ++++ +R T+HAE+L Sbjct: 1 MLTDDIFMRVAIDRAWEYQLITYPNPAVGALVELNGRVLAVEAHREAG----TSHAEVLV 56 Query: 59 I---------------RMGCRI-------LSQEILPEVDLYVTLEPCTM------CAAAI 90 + R+ + L + +YVTLEPC+ CA + Sbjct: 57 LLRAYEELSNRKIEFNRLDANLAHNFLLSLPRGFFSNCSIYVTLEPCSHTGKTPSCATLL 116 Query: 91 SLARIRRLYYGASNP---KGGGIE 111 S + +R+ G +P GG+E Sbjct: 117 SKLKPKRVVVGTLDPISSHSGGVE 140 >gi|118397|sp|P00814|DCTD_BPT2 RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP deaminase Length = 188 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI R S + +YVTL PC CA AI+ + I++L Y Sbjct: 104 HAELNAILFAARNGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVY 149 >gi|255012465|ref|ZP_05284591.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 2_1_7] Length = 359 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 17/126 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V +II +R K AHAE+ AI + + +L + +YV+LEPC+ Sbjct: 29 VGAVVVHKGRIIGEGFHR----KCGEAHAEVNAI---ASVKDESLLKDSTIYVSLEPCSH 81 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I I R+ G +P G + A E+ G+ E+ +R Sbjct: 82 YGKTPPCAELIIRKGIPRVVVGCLDPFPEVSGRGVRMLREAGV----EVVTGVMEEEARA 137 Query: 140 IIQDFF 145 + + F Sbjct: 138 LNKAFM 143 >gi|218962081|ref|YP_001741856.1| riboflavin biosynthesis protein RibD [Candidatus Cloacamonas acidaminovorans] gi|167730738|emb|CAO81650.1| riboflavin biosynthesis protein RibD [Candidatus Cloacamonas acidaminovorans] Length = 368 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 19/95 (20%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V NN++IS L+ + H+EI A++ + L +VTLEPC+ Sbjct: 30 VGSVIVKNNQVISEGWT----LEYGSDHSEIQALKKAGKKAKDATL-----FVTLEPCSH 80 Query: 86 ------CAAAISLARIRRLYYGASNP----KGGGI 110 CA AI A I+ +Y G +P KG GI Sbjct: 81 YGKTPPCAQAIIDAGIKEVYIGIYDPNPLVKGKGI 115 >gi|311993209|ref|YP_004010075.1| dCMP deaminase [Enterobacteria phage CC31] gi|284178047|gb|ADB81713.1| dCMP deaminase [Enterobacteria phage CC31] Length = 188 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI R S + +YVTL PC CA AI+ + I++L Y Sbjct: 96 HAELNAILFAARNGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVY 141 >gi|325292783|ref|YP_004278647.1| deoxycytidylate deaminase family protein [Agrobacterium sp. H13-3] gi|325060636|gb|ADY64327.1| deoxycytidylate deaminase family protein [Agrobacterium sp. H13-3] Length = 210 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 28/56 (50%) Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 N EL++ H E+ A++ + + E+ T EPCTMC +AI+ A Y Sbjct: 66 NNELENPLWHGEVHALKRFYELGEKPNTKELIFLSTHEPCTMCMSAITWAGFDNFY 121 >gi|300775167|ref|ZP_07085029.1| riboflavin biosynthesis protein RibD [Chryseobacterium gleum ATCC 35910] gi|300505907|gb|EFK37043.1| riboflavin biosynthesis protein RibD [Chryseobacterium gleum ATCC 35910] Length = 341 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 17/111 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M +++ +E AQ AL P VG+V V N +II + K HAEI Sbjct: 1 MNNDELYIKRCIELAQ-KALGKTYPNPLVGSVIVHNGEIIGEGYHH----KAGENHAEIN 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGA 102 AI + +++++PE +YV+LEPC CA I +++ GA Sbjct: 56 AIN---SVKNKDLIPESTIYVSLEPCAHYGKTPPCALKIRELGFKKVVIGA 103 >gi|313889107|ref|ZP_07822763.1| riboflavin biosynthesis protein RibD [Peptoniphilus harei ACS-146-V-Sch2b] gi|312844847|gb|EFR32252.1| riboflavin biosynthesis protein RibD [Peptoniphilus harei ACS-146-V-Sch2b] Length = 371 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 14/107 (13%) Query: 7 FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M ALE A+ + + VG V V ++KII + + LK HAE+ AI + + Sbjct: 11 YMERALEIAREGTGKTKTNPLVGCVIVKDDKIIGQGAH----LKFGENHAEVNAI-LDAK 65 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 ++I LYV LEPC+ CA I IRR+ G ++P Sbjct: 66 SRGEDIRGAT-LYVNLEPCSHYGKTPPCAERIVKEGIRRVVIGTADP 111 >gi|150010266|ref|YP_001305009.1| riboflavin biosynthesis protein ribD [Parabacteroides distasonis ATCC 8503] gi|149938690|gb|ABR45387.1| riboflavin biosynthesis protein ribD [Parabacteroides distasonis ATCC 8503] Length = 359 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 17/126 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V +II +R K AHAE+ AI + + +L + +YV+LEPC+ Sbjct: 29 VGAVVVHKGRIIGEGFHR----KCGEAHAEVNAI---ASVKDESLLKDSTIYVSLEPCSH 81 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I I R+ G +P G + A E+ G+ E+ +R Sbjct: 82 YGKTPPCAELIIRKGIPRVVVGCLDPFPEVSGRGVRMLREAGV----EVVTGVMEEEARA 137 Query: 140 IIQDFF 145 + + F Sbjct: 138 LNKAFM 143 >gi|145588458|ref|YP_001155055.1| riboflavin biosynthesis protein RibD [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046864|gb|ABP33491.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 371 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 18/116 (15%) Query: 7 FMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL EAQ A L N P VG V V + ++I R G+ R AHAEI AI + Sbjct: 9 WMGEALGEAQKALYLANPNPRVGCVIVKDGQVIGR-GHTQRV---GGAHAEIQAI-ADAK 63 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGI 110 ++I +YVTLEPC+ C A+ +AR ++ +P GGG+ Sbjct: 64 ANGKDIAGST-IYVTLEPCSHTGRTPPCVNALVVARPAKVIVSMLDPNPLVSGGGL 118 >gi|66808325|ref|XP_637885.1| hypothetical protein DDB_G0286161 [Dictyostelium discoideum AX4] gi|60466312|gb|EAL64373.1| hypothetical protein DDB_G0286161 [Dictyostelium discoideum AX4] Length = 422 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 25/103 (24%), Positives = 53/103 (51%), Gaps = 6/103 (5%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K +FM ALE A+++++ ++ V + + +G ++E + H+E++AI Sbjct: 65 LEKHEMFMKIALE----IAIKSKVKFVSIIVSPDDRVLCSGIFSKE--NAILHSELVAIT 118 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 +Y T EP ++ ++AI AR +++ YG+S Sbjct: 119 NCSSSHKMVTFENHTIYSTAEPDSLSSSAIVWARFKQVVYGSS 161 >gi|323332396|gb|EGA73805.1| Tad3p [Saccharomyces cerevisiae AWRI796] Length = 163 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 13/39 (33%), Positives = 26/39 (66%) Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 + D+Y+T EPC+MC+ A+ +R+RR+ + + G ++ Sbjct: 85 DYDVYLTHEPCSMCSMALIHSRVRRVVFLTEMQRTGSLK 123 >gi|313205464|ref|YP_004044121.1| cmp/dcmp deaminase zinc-binding protein [Paludibacter propionicigenes WB4] gi|312444780|gb|ADQ81136.1| CMP/dCMP deaminase zinc-binding protein [Paludibacter propionicigenes WB4] Length = 141 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 38/98 (38%), Gaps = 14/98 (14%) Query: 26 VGAVAVLNNKIISRAGN------------RNRELKDVTAHAEILAIRMGCRILSQEILPE 73 VGA+ V N IIS N N K HAE AI R S Sbjct: 30 VGALLVKNQMIISDGYNGTPSGFENKCEDENNVSKPYVLHAEANAISKIAR--SHNSSDN 87 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 LYVT PC CA I A I+R+ YG G+E Sbjct: 88 ATLYVTASPCIECAKLIIQAGIKRVVYGEKYRIMDGVE 125 >gi|326536349|ref|YP_004300790.1| Cd dCMP deaminase [Acinetobacter phage 133] gi|299483430|gb|ADJ19524.1| Cd dCMP deaminase [Acinetobacter phage 133] Length = 185 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI R + + LYVTL PC CA AI+ + I++L Y Sbjct: 93 HAELNAILYAAR--NGTAIEGATLYVTLSPCADCAKAIAQSGIKQLVY 138 >gi|298374645|ref|ZP_06984603.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_19] gi|298269013|gb|EFI10668.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_19] Length = 359 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 17/126 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V +II +R K AHAE+ AI + + +L + +YV+LEPC+ Sbjct: 29 VGAVVVHKGRIIGEGFHR----KCGEAHAEVNAI---ASVKDESLLTDSTIYVSLEPCSH 81 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I I R+ G +P G + A E+ G+ E+ +R Sbjct: 82 YGKTPPCAELIIRKGIPRVVVGCLDPFPEVSGRGVRMLREAGV----EVVTGVMEEEARA 137 Query: 140 IIQDFF 145 + + F Sbjct: 138 LNKAFM 143 >gi|228475866|ref|ZP_04060576.1| riboflavin biosynthesis protein RibD [Staphylococcus hominis SK119] gi|314936136|ref|ZP_07843483.1| riboflavin biosynthesis protein RibD [Staphylococcus hominis subsp. hominis C80] gi|228270021|gb|EEK11491.1| riboflavin biosynthesis protein RibD [Staphylococcus hominis SK119] gi|313654755|gb|EFS18500.1| riboflavin biosynthesis protein RibD [Staphylococcus hominis subsp. hominis C80] Length = 347 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 11/80 (13%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ AQ + + PVG+V V + +I+ + LK HAE+ A+ M Sbjct: 4 FMKYAIQLAQMVEGQTGVNPPVGSVVVKDGRIVGLGAH----LKQGEKHAEVQALDM--- 56 Query: 65 ILSQEILPEVDLYVTLEPCT 84 +Q+ +Y++LEPCT Sbjct: 57 --AQDKAKGGTIYISLEPCT 74 >gi|325676735|ref|ZP_08156408.1| cytidine/deoxycytidylate deaminase [Rhodococcus equi ATCC 33707] gi|325552283|gb|EGD21972.1| cytidine/deoxycytidylate deaminase [Rhodococcus equi ATCC 33707] Length = 172 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 2/94 (2%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEI 70 +E A A L + P G+V + + A +RNR D T H E R LS E Sbjct: 28 VELAAEALLAGDEPFGSVLATADGT-AVAEDRNRIADGDSTRHPEFELARWAAENLSAEE 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +Y + E C MCAAA + + R+ Y AS Sbjct: 87 RAGATVYTSGEHCPMCAAAHAWVGLGRIVYVAST 120 >gi|2258167|gb|AAB64529.1| Ylr316cp [Saccharomyces cerevisiae] gi|207342844|gb|EDZ70483.1| YLR316Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|323303779|gb|EGA57563.1| Tad3p [Saccharomyces cerevisiae FostersB] gi|323307960|gb|EGA61217.1| Tad3p [Saccharomyces cerevisiae FostersO] gi|323336362|gb|EGA77630.1| Tad3p [Saccharomyces cerevisiae Vin13] gi|323353850|gb|EGA85705.1| Tad3p [Saccharomyces cerevisiae VL3] Length = 163 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 13/39 (33%), Positives = 26/39 (66%) Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 + D+Y+T EPC+MC+ A+ +R+RR+ + + G ++ Sbjct: 85 DYDVYLTHEPCSMCSMALIHSRVRRVVFLTEMQRTGSLK 123 >gi|323436092|ref|ZP_08088234.1| riboflavin biosynthesis protein RibD [Dokdonia donghaensis MED134] gi|321496407|gb|EAQ38739.2| riboflavin biosynthesis protein RibD [Dokdonia donghaensis MED134] Length = 346 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 27/158 (17%) Query: 1 MKKGNVFMSCALEEAQN---AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 +K N ++ + A+N AA+ N VGAV V NN II+ HAE+ Sbjct: 14 VKIHNTYIKRCIALAKNGLPAAMPNP-SVGAVLVHNNTIIAEGYTSAYG----GPHAEVN 68 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KG 107 I + + E++ + LYV+LEPC+ CA + + I+R+ G +P G Sbjct: 69 CIAFA-KANTPELIAKSTLYVSLEPCSHWGKTPPCADLVIDSGIKRVVIGTIDPFAKVAG 127 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 GI+ Q T G+ E+ +++ + FF Sbjct: 128 AGIKKLMQAGVDVTV--------GVLEKECQEVNKRFF 157 >gi|291617164|ref|YP_003519906.1| RibD [Pantoea ananatis LMG 20103] gi|291152194|gb|ADD76778.1| RibD [Pantoea ananatis LMG 20103] Length = 162 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 17/106 (16%) Query: 8 MSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M ALE ++ A R PVG V V + +++++ + HAEI AI Sbjct: 1 MMLALEYSRQALPECRPNPPVGCVIVRDGEVVAKGFTQ----PPGQHHAEIDAIAKLTFP 56 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 +S E ++YVTLEPC+ CA I+ + + +Y +P Sbjct: 57 IS-----ECEIYVTLEPCSFQGRTPSCALTIAELKPKHIYIAMDDP 97 >gi|261867792|ref|YP_003255714.1| riboflavin biosynthesis protein RibD [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413124|gb|ACX82495.1| riboflavin biosynthesis protein RibD [Aggregatibacter actinomycetemcomitans D11S-1] Length = 374 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 21/151 (13%) Query: 7 FMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL+ A+ VG V V N KI+ + + K HAE++A+R Sbjct: 12 FMQLALDLAKQGEFTTTPNPSVGCVLVKNGKIVGKGFH----FKAGEPHAEVMALRE--- 64 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + E YVTLEPC+ CA + A + ++ +P G Q Sbjct: 65 --AGENARGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVAGKGLQILA 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ E+++ Q+ + F K R Sbjct: 123 DAGIQSA----VGLLEEKAEQLNKGFLKRMR 149 >gi|118445111|ref|YP_879181.1| riboflavin biosynthesis protein RibD [Clostridium novyi NT] gi|118135567|gb|ABK62611.1| riboflavin biosynthesis protein RibD [Clostridium novyi NT] Length = 377 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 35/135 (25%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V +NKII + + AHAE+ A++ + E + +YVTLEPC+ Sbjct: 31 VGAVIVKDNKIIGQGYHERFG----GAHAEVNALKN-----ATEDVTGATMYVTLEPCSH 81 Query: 86 ------CAAAISLARIRRLYYGASNPK----GGGI----ENGTQFYTLATCHHSPEIYPG 131 CA I + I+ + G +P G GI ENG + + G Sbjct: 82 YGKTPPCANTIVKSGIKEVIVGMRDPNELVAGRGINILKENGIK------------VIVG 129 Query: 132 ISEQRSRQIIQDFFK 146 + E+ ++I + F K Sbjct: 130 VFEEEIKKINEIFIK 144 >gi|331001110|ref|ZP_08324741.1| riboflavin biosynthesis protein RibD [Parasutterella excrementihominis YIT 11859] gi|329569415|gb|EGG51193.1| riboflavin biosynthesis protein RibD [Parasutterella excrementihominis YIT 11859] Length = 355 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 24/134 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V + +II + K AHAE++A+R E + +YVTLEPC+ Sbjct: 21 VGCVIVKDRRIIGEGFTQ----KTGEAHAEVMALRDAAS--RGESVAGATVYVTLEPCSH 74 Query: 86 ------CAAAISLARIRRLYYGASNPK----GGGIENGTQFYTLATCHHSPEIYPGISEQ 135 CA A+ A++ R+ +P G G++ + C G+ + Sbjct: 75 YGRTPPCALALKNAKVARVVAALKDPNPLVAGKGLKMLEEAGVKVEC--------GLEAE 126 Query: 136 RSRQIIQDFFKERR 149 + +I + F K +R Sbjct: 127 EAEEINRGFLKRQR 140 >gi|269839638|ref|YP_003324330.1| riboflavin biosynthesis protein RibD [Thermobaculum terrenum ATCC BAA-798] gi|269791368|gb|ACZ43508.1| riboflavin biosynthesis protein RibD [Thermobaculum terrenum ATCC BAA-798] Length = 364 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 63/150 (42%), Gaps = 21/150 (14%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M ALE A++A R VGAV V + +I + + HAE++A+ Sbjct: 1 MRRALELAESALGRTWPNPAVGAVVVRDGLVIGKGATQ----PPGGPHAEVVALAEAGEA 56 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 IL YVTLEPC+ C AI A +R ++ +P G Sbjct: 57 ARGAIL-----YVTLEPCSHWGRTPPCTEAIIRAGVREVHAATLDPNPKVHGRGVAQLRE 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E++ G+ E+ + +I + FFK R Sbjct: 112 AGI----EVHLGLCEREATRINEGFFKRVR 137 >gi|86134833|ref|ZP_01053415.1| Deoxycytidylate deaminase [Polaribacter sp. MED152] gi|85821696|gb|EAQ42843.1| Deoxycytidylate deaminase [Polaribacter sp. MED152] Length = 141 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 15/123 (12%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN------------RNRELK 48 +K ++ ALE + + + + VGA+ V + IIS N N K Sbjct: 7 LKYDKAYLRMALEWGKLSHCKRK-QVGALIVKDRMIISDGFNGTPTGFDNCCEDENGATK 65 Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 HAE AI S + LY+TL PCT C+ I A I+R+ Y + Sbjct: 66 WEVLHAEANAILKVAS--STQSAKNATLYITLSPCTQCSKLIHQAGIKRVVYANAYKDPS 123 Query: 109 GIE 111 G++ Sbjct: 124 GLD 126 >gi|209879740|ref|XP_002141310.1| cytidine/deoxycytidylate deaminase family protein [Cryptosporidium muris RN66] gi|209556916|gb|EEA06961.1| cytidine/deoxycytidylate deaminase family protein [Cryptosporidium muris RN66] Length = 314 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 13/53 (24%), Positives = 32/53 (60%) Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 Y++ EPC C+ A+ +RI +++Y +N + GG+ + + + + + +H ++ Sbjct: 256 YLSHEPCVSCSMALLHSRISQVFYEYTNNESGGLGSRCKLHCITSLNHHFTVF 308 >gi|320585958|gb|EFW98637.1| ribonuclease [Grosmannia clavigera kw1407] Length = 974 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 15/37 (40%), Positives = 24/37 (64%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 ++LYVT EPC MC+ AI +R+ ++ + P GG+ Sbjct: 384 LELYVTHEPCAMCSMAILHSRMGKVVFANRMPLTGGL 420 >gi|218289836|ref|ZP_03494036.1| riboflavin biosynthesis protein RibD [Alicyclobacillus acidocaldarius LAA1] gi|218240127|gb|EED07312.1| riboflavin biosynthesis protein RibD [Alicyclobacillus acidocaldarius LAA1] Length = 371 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 27/156 (17%) Query: 1 MKKGNVFMSCALEEA---QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M + +M ALE A + N + VGA+ V ++ + + L T HAE+ Sbjct: 1 MTEDERYMRMALEVARLGEGQTSPNPM-VGAIVVNGGLVVGQGAH----LMAGTPHAEVH 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGA--SNPKGGG 109 A+RM + + LYVTLEPC C AI + +RR+ A +P+ G Sbjct: 56 ALRM-----AGDAAKGATLYVTLEPCNHHGRTPPCTDAILASGVRRVVVAALDVDPRTAG 110 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + G + A E+ G+ E +R++ + FF Sbjct: 111 L--GVKRLQDAGL----EVSVGVLEVEARELNRHFF 140 >gi|293366290|ref|ZP_06612971.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis M23864:W2(grey)] gi|291319592|gb|EFE59957.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis M23864:W2(grey)] Length = 343 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 17/87 (19%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GCRILSQEILPEVDLYVTLEPC 83 PVG+V V N +I+ + LK HAE+ AI M G I YV+LEPC Sbjct: 20 PVGSVVVKNGRIVGLGAH----LKKGDKHAEVQAIEMAGLNTQGATI------YVSLEPC 69 Query: 84 TM------CAAAISLARIRRLYYGASN 104 T C I A I ++ Y + Sbjct: 70 THHGSTPPCVHKIIEAGISKVIYAVKD 96 >gi|281204851|gb|EFA79046.1| hypothetical protein PPL_08516 [Polysphondylium pallidum PN500] Length = 246 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 16/111 (14%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL A L E P GA+ V ++N I N + +V +H EI A + Sbjct: 48 YMRIAL--AFGVTLNRERPYGAIIVNHVSNNISCYGVNSGND--NVLSHGEIAAFNNCTK 103 Query: 65 IL-----SQEILPEVD-----LYVTLEPCTMCAAAISLARIRRLYYGASNP 105 + + P ++ LY + EPC MCAAA + R+ YG P Sbjct: 104 LYPSPTGNDRTNPGINWANHTLYTSAEPCPMCAAASVWRGLGRMVYGTDIP 154 >gi|157694276|ref|YP_001488738.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Bacillus pumilus SAFR-032] gi|157683034|gb|ABV64178.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Bacillus pumilus SAFR-032] Length = 363 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 21/109 (19%) Query: 7 FMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ ALE A+ A++ + VGAV V N+I+ + +K HAEI A++M Sbjct: 7 YMNLALENAR--AMKGQTSPNPLVGAVIVRENEIVGVGAH----MKAGEPHAEIHALKM- 59 Query: 63 CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + + +YVTLEPC+ CA A+ A + + A +P Sbjct: 60 ----AGDKAKGATIYVTLEPCSHHGRTGPCAEALVKAGVETVVVAALDP 104 >gi|161622500|ref|YP_001595339.1| Cd dCMP deaminase [Enterobacteria phage JS98] gi|238695364|ref|YP_002922557.1| Cd dCMP deaminase [Enterobacteria phage JS10] gi|160213806|gb|ABX11145.1| Cd dCMP deaminase [Enterobacteria phage JS98] gi|220029500|gb|ACL78434.1| Cd dCMP deaminase [Enterobacteria phage JS10] Length = 181 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA---SNPKG 107 HAE+ AI R S + +YVTL PC CA +I+ + I+ L Y NP+G Sbjct: 92 HAELNAILFAARTGSS--IDGATMYVTLSPCADCAKSIAQSGIKTLVYAELYDRNPEG 147 >gi|229916731|ref|YP_002885377.1| riboflavin biosynthesis protein RibD [Exiguobacterium sp. AT1b] gi|229468160|gb|ACQ69932.1| riboflavin biosynthesis protein RibD [Exiguobacterium sp. AT1b] Length = 354 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 17/107 (15%) Query: 7 FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A++ A++A + + VGAV V + +I+ + LK HAE+ AIRM Sbjct: 4 YMEQAIQLAKSADGQTGVNPLVGAVLVKDGRIVGMGAH----LKAGEPHAEVHAIRMAGA 59 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 L YVTLEPC+ CA I + I+R+ +P Sbjct: 60 AAYGATL-----YVTLEPCSHHGKTPPCADLIVESGIKRVVIAMKDP 101 >gi|138895866|ref|YP_001126319.1| riboflavin biosynthesis protein RibD [Geobacillus thermodenitrificans NG80-2] gi|134267379|gb|ABO67574.1| Riboflavin biosynthesis protein RibD [Geobacillus thermodenitrificans NG80-2] Length = 359 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 15/86 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V + I+ + LK HAE+ AIRM + E +YVTLEPC+ Sbjct: 21 VGAVVVNDGTIVGIGAH----LKAGEPHAEVHAIRM-----AGEKARGATVYVTLEPCSH 71 Query: 86 ------CAAAISLARIRRLYYGASNP 105 CA + A +RR+ ++P Sbjct: 72 YGKTPPCADLLIEAGVRRVVVATTDP 97 >gi|76798747|ref|ZP_00780965.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae 18RS21] gi|76585902|gb|EAO62442.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae 18RS21] Length = 362 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 17/106 (16%) Query: 8 MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+EA+ + VGAV V +++IIS+ ++ D+ HAE AI+ Sbjct: 1 MALALKEAEKGMGFVAPNPLVGAVIVKDDRIISKG--YHKRFGDL--HAERQAIKN---- 52 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + E + LYVTLEPC C A+ + I+++ G+ +P Sbjct: 53 -ADEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDP 97 >gi|299779161|ref|YP_003734355.1| Cd dCMP deaminase [Enterobacteria phage IME08] gi|298105890|gb|ADI55534.1| Cd dCMP deaminase [Enterobacteria phage IME08] Length = 181 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA---SNPKG 107 HAE+ AI R S + +YVTL PC CA +I+ + I+ L Y NP+G Sbjct: 92 HAELNAILFAARTGSS--IDGATMYVTLSPCADCAKSIAQSGIKTLVYAELYDRNPEG 147 >gi|293390135|ref|ZP_06634469.1| riboflavin biosynthesis protein RibD [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950669|gb|EFE00788.1| riboflavin biosynthesis protein RibD [Aggregatibacter actinomycetemcomitans D7S-1] Length = 374 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 21/151 (13%) Query: 7 FMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL+ A+ VG V V N KI+ + + K HAE++A+R Sbjct: 12 FMQLALDLAKQGEFTTTPNPSVGCVLVKNGKIVGKGFH----FKAGEPHAEVMALRE--- 64 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + E YVTLEPC CA ++ A + ++ +P G Q Sbjct: 65 --AGENARGATAYVTLEPCFHFGRTPPCAKGLAEAGVSKVIAAMYDPNPQVAGKGLQILA 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ E+++ Q+ + F K R Sbjct: 123 DAGIQSA----VGLLEEKAEQLNKGFLKRMR 149 >gi|253743502|gb|EES99877.1| Hypothetical protein GL50581_2888 [Giardia intestinalis ATCC 50581] Length = 282 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 15/50 (30%), Positives = 23/50 (46%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 D++ EPC C+ + ARIRR++Y GG+ L +H Sbjct: 225 DVFTLEEPCIFCSMCLLHARIRRVFYSVPMEHNGGLNESLMVPALPGVNH 274 >gi|328952293|ref|YP_004369627.1| riboflavin biosynthesis protein RibD [Desulfobacca acetoxidans DSM 11109] gi|328452617|gb|AEB08446.1| riboflavin biosynthesis protein RibD [Desulfobacca acetoxidans DSM 11109] Length = 362 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 42/94 (44%), Gaps = 19/94 (20%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V + I+ R +R HAE+ A+R SQ LYVTLEPC Sbjct: 21 VGAVVVRDGYIVGRGYHRRYG----GPHAEVEALRQAG---SQA--DGATLYVTLEPCNH 71 Query: 86 ------CAAAISLARIRRLYYGASNPK----GGG 109 C AI A IRR+ S+P GGG Sbjct: 72 YGQTPPCTEAILAAGIRRVVIANSDPNPHVAGGG 105 >gi|313768407|ref|YP_004062087.1| hypothetical protein MpV1_204 [Micromonas sp. RCC1109 virus MpV1] gi|312599103|gb|ADQ91127.1| hypothetical protein MpV1_204 [Micromonas sp. RCC1109 virus MpV1] Length = 145 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 16/103 (15%) Query: 12 LEEAQNAALRN---EIPVGAVAVLNNKIISRAGN-------RNRELKD----VTAHAEIL 57 ++ AQ A++R+ + VG V V NN++IS N ++D T HAEI Sbjct: 12 MQTAQLASVRSPCERLKVGCVLVKNNRLISMGYNGFLGGCEHKSIVRDGHEQATIHAEIN 71 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 AI + + + + YVT PC C A++ + I+++YY Sbjct: 72 AITDAAKRGAS--IDDCVAYVTHYPCLNCYKALASSGIKKVYY 112 >gi|237715308|ref|ZP_04545789.1| riboflavin biosynthesis protein ribD [Bacteroides sp. D1] gi|294643551|ref|ZP_06721357.1| riboflavin biosynthesis protein RibD [Bacteroides ovatus SD CC 2a] gi|294807058|ref|ZP_06765877.1| riboflavin biosynthesis protein RibD [Bacteroides xylanisolvens SD CC 1b] gi|229444617|gb|EEO50408.1| riboflavin biosynthesis protein ribD [Bacteroides sp. D1] gi|292641126|gb|EFF59338.1| riboflavin biosynthesis protein RibD [Bacteroides ovatus SD CC 2a] gi|294445757|gb|EFG14405.1| riboflavin biosynthesis protein RibD [Bacteroides xylanisolvens SD CC 1b] Length = 345 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M +E A+N L N P VGAV V + +II + ++ AHAE+ AI Sbjct: 6 YMRRCIELAKNG-LCNVSPNPMVGAVIVCDGRIIGEGYH----IRCGEAHAEVNAIH--- 57 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + +L +YV+LEPC+ CA I +I R+ G +P G Q Sbjct: 58 SVKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGRGIQKL 117 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ E+ + +I+ F Sbjct: 118 RDA----GREVSVGVLEEECKSLIRRFI 141 >gi|182417348|ref|ZP_02948682.1| riboflavin biosynthesis protein RibD [Clostridium butyricum 5521] gi|237668576|ref|ZP_04528560.1| riboflavin biosynthesis protein RibD [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378778|gb|EDT76300.1| riboflavin biosynthesis protein RibD [Clostridium butyricum 5521] gi|237656924|gb|EEP54480.1| riboflavin biosynthesis protein RibD [Clostridium butyricum E4 str. BoNT E BL5262] Length = 360 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 21/148 (14%) Query: 7 FMSCALEEA-QNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M ALE A + + N P VGAV V +NK+I + K AHAE A++ Sbjct: 5 YMKRALELAIKGVGMVNPNPMVGAVIVKDNKVIGEGFHE----KYGHAHAERNAVKNAV- 59 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 E + +YVTLEPC C + ++R++ G +P + G Sbjct: 60 ----EDIEGATVYVTLEPCAHYGKTPPCVDLLIEKKVRKVVIGMLDP--NPLVAGKSIKK 113 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146 L ++ E+ G+ E+ R++ + F K Sbjct: 114 LK--ENNIEVKVGVKEKECRKLNEVFIK 139 >gi|262405149|ref|ZP_06081699.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_22] gi|262356024|gb|EEZ05114.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_22] Length = 351 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M +E A+N L N P VGAV V + +II + ++ AHAE+ AI Sbjct: 12 YMRRCIELAKNG-LCNVSPNPMVGAVIVCDGRIIGEGYH----IRCGEAHAEVNAIH--- 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + +L +YV+LEPC+ CA I +I R+ G +P G Q Sbjct: 64 SVKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGRGIQKL 123 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ E+ + +I+ F Sbjct: 124 RDA----GREVSVGVLEEECKSLIRRFI 147 >gi|257413677|ref|ZP_04743810.2| riboflavin biosynthesis protein RibD [Roseburia intestinalis L1-82] gi|257202725|gb|EEV01010.1| riboflavin biosynthesis protein RibD [Roseburia intestinalis L1-82] Length = 173 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 20/117 (17%) Query: 2 KKGNVFM--------SCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAH 53 +KG VFM + L E + VGAV V ++II +++ + A Sbjct: 25 RKGKVFMQQERYMRRAMELAELGRGWTKTNPVVGAVLVKEDRIIGEG--YHKKFGGLHAE 82 Query: 54 AEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASN 104 E LA CR ++ DLYVTLEPC C A+ A I ++ GA + Sbjct: 83 REALA---DCRSRGEDP-AGADLYVTLEPCCHYGKTPPCTQAVIEAGISHVFVGAED 135 >gi|77409347|ref|ZP_00786049.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae COH1] gi|77172049|gb|EAO75216.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae COH1] Length = 362 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 17/106 (16%) Query: 8 MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+EA+ + VGAV V +++IIS+ ++ D+ HAE AI+ Sbjct: 1 MALALKEAEKGMGFVAPNPLVGAVIVKDDRIISKG--YHKRFGDL--HAERQAIKN---- 52 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + E + LYVTLEPC C A+ + I+++ G+ +P Sbjct: 53 -ADEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDP 97 >gi|302907570|ref|XP_003049675.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256730611|gb|EEU43962.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 433 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 13/39 (33%), Positives = 24/39 (61%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++LYVT EPC C+ I +R+ ++ + P+ GG+ + Sbjct: 350 LELYVTHEPCVSCSMGILHSRMGKVVFATHMPRSGGLSS 388 >gi|330752436|emb|CBL87386.1| riboflavin biosynthesis protein [uncultured Flavobacteria bacterium] Length = 310 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 9/60 (15%) Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 +HAE+ AI+ + +QE+L LYVTLEPC+ C I +I R+ G +P Sbjct: 24 SHAEVNAIK---SVKNQELLKSATLYVTLEPCSHHGKTPPCCDLILSRQIPRVVIGCIDP 80 >gi|88801568|ref|ZP_01117096.1| deoxycytidylate deaminase [Polaribacter irgensii 23-P] gi|88782226|gb|EAR13403.1| deoxycytidylate deaminase [Polaribacter irgensii 23-P] Length = 141 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 25/128 (19%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIIS----------------RAGNRN 44 +K ++ ALE + + + + VGA+ V N IIS +GN Sbjct: 7 LKYDRAYLKMALEWGKLSHCKRK-QVGALIVKNRMIISDGFNGTPTGFENCCEDSSGNTK 65 Query: 45 RELKDVTAHAEILAIRMGCRILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 E+ HAE AI ++ S E LY+TL PCT C+ I A I+R+ Y + Sbjct: 66 WEV----LHAEANAI---LKVASSTQSAEGATLYITLSPCTQCSKLIHQAGIKRVVYANA 118 Query: 104 NPKGGGIE 111 G++ Sbjct: 119 YKDDAGLK 126 >gi|145589924|ref|YP_001156521.1| CMP/dCMP deaminase, zinc-binding [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048330|gb|ABP34957.1| CMP/dCMP deaminase, zinc-binding protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 186 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 6/82 (7%) Query: 25 PVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 P GA A+ N+K I+++ N+ + H E++ I + + LY T E Sbjct: 54 PFGA-AITNSKSGKILAQG--VNKTFSNPVLHGEMVCINQYVAQHGNQGWANLILYTTGE 110 Query: 82 PCTMCAAAISLARIRRLYYGAS 103 PC MC +A+ + I + YG+S Sbjct: 111 PCPMCMSALIWSGIGGVVYGSS 132 >gi|198273955|ref|ZP_03206487.1| hypothetical protein BACPLE_00091 [Bacteroides plebeius DSM 17135] gi|198273033|gb|EDY97302.1| hypothetical protein BACPLE_00091 [Bacteroides plebeius DSM 17135] Length = 346 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 17/125 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V + KII ++ HAE+ AI + + +L + +YV+LEPC+ Sbjct: 28 VGAVIVRDGKIIGEG----YHVRCGEGHAEVNAI---ASVKDESLLKDATIYVSLEPCSH 80 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I I R+ G +P G Q A E+ G+ E+ R+ Sbjct: 81 YGKTPPCADLIIRKGIPRVVVGCVDPFSLVAGRGIQKLRDAGI----EVTVGVLEKECRE 136 Query: 140 IIQDF 144 +I+ F Sbjct: 137 LIRAF 141 >gi|134096905|ref|YP_001102566.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Saccharopolyspora erythraea NRRL 2338] gi|291006653|ref|ZP_06564626.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Saccharopolyspora erythraea NRRL 2338] gi|133909528|emb|CAL99640.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Saccharopolyspora erythraea NRRL 2338] Length = 159 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 1/91 (1%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A+E + A + P G++ V + +++ N R +D++AH E+ R L Sbjct: 12 AIELSARARESGDEPFGSLLVGPDGAVLAEDVNTVRTDRDISAHPELKLAVWAARHLDPA 71 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 +Y + E C MC+AA+ + + RL + Sbjct: 72 TSAATTMYTSCENCAMCSAAMVSSGVGRLVF 102 >gi|159038151|ref|YP_001537404.1| CMP/dCMP deaminase zinc-binding [Salinispora arenicola CNS-205] gi|157916986|gb|ABV98413.1| CMP/dCMP deaminase zinc-binding [Salinispora arenicola CNS-205] Length = 162 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 11/96 (11%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRE----LKDVTAHAEILAIRMGCRILSQEILPEVDL 76 R PVG + I++ AG++ E D HAE A+ R+ L L Sbjct: 20 RGSSPVGTAYSVGAIIVAAAGDQLTEGYSRDTDAHTHAEESAVAKVERLAPHPDLTGATL 79 Query: 77 YVTLEPCT-------MCAAAISLARIRRLYYGASNP 105 Y ++EPCT C I A IRR+ Y P Sbjct: 80 YSSMEPCTSRKSRPRTCTELILAAGIRRVVYALREP 115 >gi|439727|emb|CAA52372.1| hygromycin phosphotransferase [Burkholderia pseudomallei] gi|1094885|prf||2107161A glpA gene Length = 420 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLY-YGASNPKGGGIENGTQFYTLATCHHSP 126 ++ LPE +L L+PCT A AI+ A + + P+G G E T + C+ P Sbjct: 275 EQDLPETELPAVLQPCTGMAHAIAAADLSHTSGFAPFGPQGMGQE--TPWRDKRDCYFDP 332 Query: 127 EIYPGISE 134 ++Y +S+ Sbjct: 333 QVYYWLSQ 340 >gi|255729574|ref|XP_002549712.1| hypothetical protein CTRG_04009 [Candida tropicalis MYA-3404] gi|240132781|gb|EER32338.1| hypothetical protein CTRG_04009 [Candida tropicalis MYA-3404] Length = 325 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 15/37 (40%), Positives = 22/37 (59%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 +Y T EPC MC A+ +RI R+ Y + GG+E+ Sbjct: 248 VYTTHEPCIMCCMALVHSRIARVTYINTAKNSGGLES 284 >gi|221059810|ref|XP_002260550.1| Cytidine and deoxycytidylate deaminase-like protein [Plasmodium knowlesi strain H] gi|193810624|emb|CAQ42522.1| Cytidine and deoxycytidylate deaminase-like protein, putative [Plasmodium knowlesi strain H] Length = 365 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 14/56 (25%), Positives = 31/56 (55%) Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132 Y++ EPC MCA A+ +RI+ + + N G + + + +++ +H ++Y + Sbjct: 306 YLSHEPCFMCAMAMVHSRIKCVIFDELNRDNGALFSRAKLHSVKNLNHHFKVYKTV 361 >gi|254787586|ref|YP_003075015.1| riboflavin biosynthesis protein RibD [Teredinibacter turnerae T7901] gi|237683563|gb|ACR10827.1| riboflavin biosynthesis protein RibD [Teredinibacter turnerae T7901] Length = 363 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 17/110 (15%) Query: 5 NVFMSCAL---EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 VFM AL EE N N VG V V + +I G +R + HAE+ A++ Sbjct: 8 TVFMQQALRLAEEGLNTTTPNPR-VGCVLVKDGVVIGE-GYHHRAGE---PHAEVNALK- 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 ++ ++ L YVTLEPC+ CA A+ A I RL Y +P Sbjct: 62 --SVIDRQQLAGATAYVTLEPCSHTGKTGPCADALVDAGIGRLVYAMEDP 109 >gi|262382448|ref|ZP_06075585.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_33B] gi|262295326|gb|EEY83257.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_33B] Length = 345 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 17/126 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V +II +R K AHAE+ AI + + +L + +YV+LEPC+ Sbjct: 29 VGAVVVHKGRIIGEGFHR----KCGEAHAEVNAI---ASVKDESLLKDSTIYVSLEPCSH 81 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I I R+ G +P G + A E+ G+ E+ +R Sbjct: 82 YGKTPPCAELIIRKGIPRVVVGCLDPFPEVSGRGVRMLREAGV----EVVTGVMEEEARV 137 Query: 140 IIQDFF 145 + + F Sbjct: 138 LNKAFM 143 >gi|260900445|ref|ZP_05908840.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037] gi|308106996|gb|EFO44536.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037] gi|328470945|gb|EGF41856.1| putative deoxycytidylate deaminase [Vibrio parahaemolyticus 10329] Length = 154 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 40/87 (45%), Gaps = 18/87 (20%) Query: 26 VGAVAVLNNKIISRAGN------------RNRELKDV-TAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N RELK + T HAE AI + S+ L Sbjct: 27 VGAVITKQNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLY 99 D++VT PC CAA I I R++ Sbjct: 82 GCDIWVTHFPCPNCAAKIIQTGISRVH 108 >gi|46138639|ref|XP_391010.1| hypothetical protein FG10834.1 [Gibberella zeae PH-1] Length = 173 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 11/102 (10%) Query: 11 ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELK--------DVTAHAEILAIRM 61 A+ A A + P G+V V +NK++ +RNR + D T H E R Sbjct: 13 AVSLAHEALKAGDAPFGSVLVSSDNKVLQT--DRNRTVTGSDGDSRPDATLHPEFTLARW 70 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 LS E +Y + E C MC+AA + + R+ Y +S Sbjct: 71 AQLNLSAEERKNSTVYTSGEHCAMCSAAHAWCGLGRIVYVSS 112 >gi|255528573|ref|ZP_05395347.1| riboflavin biosynthesis protein RibD [Clostridium carboxidivorans P7] gi|296188130|ref|ZP_06856522.1| riboflavin biosynthesis protein RibD [Clostridium carboxidivorans P7] gi|255507738|gb|EET84204.1| riboflavin biosynthesis protein RibD [Clostridium carboxidivorans P7] gi|296047256|gb|EFG86698.1| riboflavin biosynthesis protein RibD [Clostridium carboxidivorans P7] Length = 370 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 19/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V N I+ + ++ HAE+ A++ + E +LYV+LEPC+ Sbjct: 33 VGAVIVNNGNIVGQGYHKFYG----GPHAEVYALKE-----AGESAKGGELYVSLEPCSH 83 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA A+ A I+++ +P NG + + E+ G+ E+ +++ Sbjct: 84 YGKTPPCAEAVLKAGIKKVVIAMKDPNSLVAGNGIKLLE----KNGVEVIVGVLEEEAKK 139 Query: 140 IIQDFFK 146 + + F K Sbjct: 140 VNEIFIK 146 >gi|114777284|ref|ZP_01452295.1| cytidine and deoxycytidylate deaminase family protein [Mariprofundus ferrooxydans PV-1] gi|114552429|gb|EAU54912.1| cytidine and deoxycytidylate deaminase family protein [Mariprofundus ferrooxydans PV-1] Length = 195 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Query: 52 AHAEILAIRMGCRILSQEIL----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 AHAE++AI + L L +L + EPC MC AI + IR+L GAS+ Sbjct: 80 AHAEMVAISSAQQKLGSFDLGSGTARYELVTSCEPCAMCFGAIPWSGIRQLVCGASD 136 >gi|27904888|ref|NP_778014.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46396884|sp|Q89AB0|RIBD_BUCBP RecName: Full=Riboflavin biosynthesis protein RibD; Includes: RecName: Full=Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase; Includes: RecName: Full=5-amino-6-(5-phosphoribosylamino)uracil reductase; AltName: Full=HTP reductase gi|27904286|gb|AAO27119.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 372 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 27/151 (17%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A++ A+ +L P VG + V NN I+ ++ +K HAEI A++ Sbjct: 6 YMKKAIKLAKKGSLTTS-PNPNVGCIIVNNNIIVGSGWHKKTGMK----HAEIYALKT-- 58 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGA--SNPKGGGIENGTQ 115 S E Y+TLEPC+ C A++ I R+ NPK G NG + Sbjct: 59 ---SGEKAKGATAYITLEPCSHFGKTPPCCVALTKYGISRVVIATLDPNPKVSG--NGVK 113 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + H + G + S +I + FF+ Sbjct: 114 WLK----KHGILVTIGTLSKESIKINKGFFQ 140 >gi|194016088|ref|ZP_03054703.1| riboflavin biosynthesis protein RibD [Bacillus pumilus ATCC 7061] gi|194012443|gb|EDW22010.1| riboflavin biosynthesis protein RibD [Bacillus pumilus ATCC 7061] Length = 361 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 21/115 (18%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 MK +M A+ A+ A++ + VGAV V +I+ + +K HAEI Sbjct: 1 MKDDVFYMKLAIANAK--AMKGQTSPNPLVGAVIVQQGEIVGMGAH----MKAGEPHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 A+ M + E LYVTLEPC+ C AI + ++R+ +P Sbjct: 55 HALHM-----AGEKAEGAHLYVTLEPCSHHGKTGPCTEAIIKSGVKRVVIATQDP 104 >gi|226294624|gb|EEH50044.1| predicted protein [Paracoccidioides brasiliensis Pb18] Length = 264 Score = 35.8 bits (81), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 4/79 (5%) Query: 29 VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG-CRILSQEIL---PEVDLYVTLEPCT 84 ++VL + +I R E+ +T ++L + G ++ + L E+ LY E C+ Sbjct: 111 LSVLGSTLIQLPFQRTGEIAAITNCTKVLTDKSGRFKMTPSQTLNAFKELTLYSNAESCS 170 Query: 85 MCAAAISLARIRRLYYGAS 103 MC +AI A + YG+S Sbjct: 171 MCTSAIRWAGFKEYVYGSS 189 >gi|121533690|ref|ZP_01665517.1| riboflavin biosynthesis protein RibD [Thermosinus carboxydivorans Nor1] gi|121307681|gb|EAX48596.1| riboflavin biosynthesis protein RibD [Thermosinus carboxydivorans Nor1] Length = 379 Score = 35.8 bits (81), Expect = 2.3, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 15/86 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V + I+ + + T HAEI AI + ++ + LYVTLEPC+ Sbjct: 27 VGAVIVKDGTIVGEGWHH----RAGTPHAEIHAINQ-----AGDLAKDATLYVTLEPCSH 77 Query: 86 ------CAAAISLARIRRLYYGASNP 105 C AI A I R+ ++P Sbjct: 78 YGRTGPCVQAIVQAGITRVVAAMTDP 103 >gi|91225503|ref|ZP_01260625.1| putative riboflavin deaminase [Vibrio alginolyticus 12G01] gi|269968858|ref|ZP_06182841.1| putative riboflavin deaminase [Vibrio alginolyticus 40B] gi|91189866|gb|EAS76139.1| putative riboflavin deaminase [Vibrio alginolyticus 12G01] gi|269826538|gb|EEZ80889.1| putative riboflavin deaminase [Vibrio alginolyticus 40B] Length = 141 Score = 35.8 bits (81), Expect = 2.3, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 33/123 (26%) Query: 7 FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRA------GNRNRELKDVTAHAEILA 58 FM ALE ++NA + PVG V V +N+I+S GN HAE+ A Sbjct: 5 FMRRALEVSKNALPECQPNPPVGCVLVKDNQIVSEGHTQAIGGN----------HAEVEA 54 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108 + Q L V YVTLEPC+ CA + + I ++ +P G Sbjct: 55 LNA-----YQGSLESVTAYVTLEPCSFVGRTPACAVTLVKSGISKVVVAILDPDPRNSGR 109 Query: 109 GIE 111 GIE Sbjct: 110 GIE 112 >gi|317122797|ref|YP_004102800.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Thermaerobacter marianensis DSM 12885] gi|315592777|gb|ADU52073.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Thermaerobacter marianensis DSM 12885] Length = 427 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 19/109 (17%) Query: 7 FMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL A A R N + VGAV V + +++ +R + HAEI A+RM Sbjct: 38 FMRRALRLASRARGRTHPNPM-VGAVIVRDGEVVGEGFHR----RAGEPHAEIEALRM-- 90 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106 + E LYVTLEPC C AI A +RR+ +P Sbjct: 91 ---AGERARGATLYVTLEPCCHYGRTPPCTGAIISAGLRRVVVAMVDPD 136 >gi|261213199|ref|ZP_05927482.1| putative deoxycytidylate deaminase [Vibrio sp. RC341] gi|260837617|gb|EEX64311.1| putative deoxycytidylate deaminase [Vibrio sp. RC341] Length = 243 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 7/80 (8%) Query: 47 LKDVT-----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 +KD+T HAE+ AI R S + DLY T PC CA I + I+R+ Y Sbjct: 83 IKDITEYGRVVHAEMEAILACAR--SDISTKDADLYCTTFPCHNCAKHIVASGIKRVVYV 140 Query: 102 ASNPKGGGIENGTQFYTLAT 121 PK ++ + TL + Sbjct: 141 EPYPKSKALDFHSDSITLES 160 >gi|300871035|ref|YP_003785907.1| riboflavin biosynthesis protein RibD [Brachyspira pilosicoli 95/1000] gi|300688735|gb|ADK31406.1| riboflavin biosynthesis protein, RibD [Brachyspira pilosicoli 95/1000] Length = 365 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 18/117 (15%) Query: 7 FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A+EEA+ + P VGAV V ++++I ++ K HAEI A Sbjct: 5 YMRMAIEEAKKGEGFTSPNPLVGAVIVKDDRVIGIGYHK----KYGENHAEINAFLNAKE 60 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYG--ASNPK--GGGIE 111 + E + +YVTLEPC+ CA AI +++++ G SNPK G GI+ Sbjct: 61 --NGEDVEGASIYVTLEPCSHYGKTPPCADAIIKNKLKKVIIGCVDSNPKVAGNGIK 115 >gi|119356772|ref|YP_911416.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Chlorobium phaeobacteroides DSM 266] gi|119354121|gb|ABL64992.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Chlorobium phaeobacteroides DSM 266] Length = 366 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 17/99 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V N +I+ + + HAE+ AI + + E+L LYV LEPC+ Sbjct: 30 VGSVIVHNGEIVGEGYHE----RFGGPHAEVHAI---ASVGNAEVLQNSTLYVNLEPCSH 82 Query: 86 ------CAAAISLARIRRLYYGASNPK----GGGIENGT 114 CA I RI R+ G +P G GIE T Sbjct: 83 FGKTPPCADLILAKRIPRVVIGCRDPHEKVAGKGIERLT 121 >gi|282877095|ref|ZP_06285937.1| riboflavin biosynthesis protein RibD [Prevotella buccalis ATCC 35310] gi|281300777|gb|EFA93104.1| riboflavin biosynthesis protein RibD [Prevotella buccalis ATCC 35310] Length = 326 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 12/103 (11%) Query: 10 CALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 C Q AL P VGAV V +I+ ++ AHAE+ A R + Sbjct: 14 CLQLAKQGRALAKPNPMVGAVIVYQGRILGEG----YHVRCGQAHAEVNAF-ASVRPADE 68 Query: 69 EILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 +LP+ LYV+LEPC CA I ++R+ G +P Sbjct: 69 PLLPQSTLYVSLEPCCHTGKTPPCADLIIRKHVKRVVCGCIDP 111 >gi|257126309|ref|YP_003164423.1| riboflavin biosynthesis protein RibD [Leptotrichia buccalis C-1013-b] gi|257050248|gb|ACV39432.1| riboflavin biosynthesis protein RibD [Leptotrichia buccalis C-1013-b] Length = 371 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 14/107 (13%) Query: 7 FMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A+E A+ A N P VGAV V K+I ++ HAE+ A+ + Sbjct: 9 YMRMAIELAKKGARAVNPNPMVGAVVVQAGKVIGTGYHKYFG----GPHAEVYALDEASK 64 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + + L +YVTLEPC+ CA I ++R G+S+P Sbjct: 65 --NSKDLSNATIYVTLEPCSHYGKTPPCAEKIVKLGLKRCVIGSSDP 109 >gi|291449353|ref|ZP_06588743.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291352300|gb|EFE79204.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 316 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 13/95 (13%) Query: 43 RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL---- 98 RN +DV+ + A R G R+ + +P L P A SLA RR+ Sbjct: 65 RNAAGQDVSIERAVAAARSGTRLYGPDPVPVAALDTDRTPHIEVTAESSLAAARRMTGEA 124 Query: 99 --------YYGASNPKGGGIENGTQFYTLATCHHS 125 Y A NP GGG NG Q A C S Sbjct: 125 PGRVAVLNYASARNP-GGGYLNGAQAQEEALCRGS 158 >gi|157376789|ref|YP_001475389.1| CMP/dCMP deaminase, zinc-binding [Shewanella sediminis HAW-EB3] gi|157319163|gb|ABV38261.1| CMP/dCMP deaminase, zinc-binding [Shewanella sediminis HAW-EB3] Length = 145 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 18/87 (20%) Query: 26 VGAVAVLNNKIIS------------RAGNRNRELKDV-TAHAEILAIRMGCRILSQEILP 72 VGAV NN+I+S A NRE+K + T HAE AI R LS Sbjct: 27 VGAVITENNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILHAKRDLS----- 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLY 99 +++VT PC CAA I +R ++ Sbjct: 82 SCEIWVTHFPCPNCAAKIIQTGLRAVH 108 >gi|189345709|ref|YP_001942238.1| CMP/dCMP deaminase, zinc-binding [Chlorobium limicola DSM 245] gi|189339856|gb|ACD89259.1| CMP/dCMP deaminase, zinc-binding [Chlorobium limicola DSM 245] Length = 112 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTLATC 122 LP+++L + EPC MC AI + IR++ GA+ + + G + G + C Sbjct: 21 LPDLELVTSTEPCAMCFGAIIWSGIRKVISGATSRDAEAAGFDEGPKPDNWIAC 74 >gi|333029739|ref|ZP_08457800.1| riboflavin biosynthesis protein RibD [Bacteroides coprosuis DSM 18011] gi|332740336|gb|EGJ70818.1| riboflavin biosynthesis protein RibD [Bacteroides coprosuis DSM 18011] Length = 348 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 13/86 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V II + ++ AHAE+ AI + Q +LPE ++V+LEPC+ Sbjct: 27 VGAVIVHKGIIIGEGFH----IQSGKAHAEVNAIN---SVKDQSLLPESTIFVSLEPCSH 79 Query: 86 ------CAAAISLARIRRLYYGASNP 105 C I +I + G +P Sbjct: 80 TGKTPPCVDLIINKKIPHVVIGCQDP 105 >gi|269114924|ref|YP_003302687.1| Deoxycytidylate deaminase [Mycoplasma hominis] gi|268322549|emb|CAX37284.1| Deoxycytidylate deaminase [Mycoplasma hominis ATCC 23114] Length = 158 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 HAE AI + I + +I+P LYVT PC CA I ++I ++ Y + Sbjct: 73 HAEANAI-INANITNSKIIPGSILYVTHSPCYHCAKLIVQSKISKVVYAVA 122 >gi|116617932|ref|YP_818303.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096779|gb|ABJ61930.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 344 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 17/96 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V + ++I+ + K AHAEI A R+ ++ LYVTLEPC+ Sbjct: 28 VGAVIVKDGQVITTGYHE----KFGEAHAEINAFN---RVKNKTEFLGATLYVTLEPCST 80 Query: 86 ------CAAAISLARIRRLYYGASNP----KGGGIE 111 CA I ++R+ G+ +P G GI+ Sbjct: 81 QGKVGSCAVQIQNWGLKRVVVGSIDPNPSTNGKGIK 116 >gi|308516912|emb|CBW47017.1| hypothetical protein [Roseovarius sp. 217 phage 1] Length = 143 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 13/110 (11%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGN----RNRELKDVTA------H 53 F AL AQ +LR+ P VGAV + +K I+ G R + KD+ + Sbjct: 5 FTEWALGLAQAVSLRSRDPSTKVGAVIIRPDKTIASMGYNGFPRTMQDKDIWWNDRTEKY 64 Query: 54 AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 A ++ M + ++E + + LY T C CA + A IR +++ S Sbjct: 65 ARVIHAEMNALLNAKESVNGMQLYCTHPCCEHCAKHVIAAGIRHVHFYTS 114 >gi|170760325|ref|YP_001788192.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A3 str. Loch Maree] gi|169407314|gb|ACA55725.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A3 str. Loch Maree] Length = 365 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 29/158 (18%) Query: 1 MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ N +M AL+ A+ + N P VGA+ V NNKII ++ HAE+ A Sbjct: 1 MEDYNFYMEKALKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFG----GPHAEVYA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108 +R + E +Y+TLEPC+ CA I I + +P +G Sbjct: 57 LRE-----ASEKAKGATMYITLEPCSHYGKTPPCAEYIVKMGISKAIIAMKDPNPLVEGR 111 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 GI+ Q + E+ I E+ S+++ + F K Sbjct: 112 GIDILKQ--------NGIEVVTEIMEKESKKLNEVFIK 141 >gi|114564723|ref|YP_752237.1| CMP/dCMP deaminase, zinc-binding [Shewanella frigidimarina NCIMB 400] gi|114336016|gb|ABI73398.1| CMP/dCMP deaminase, zinc-binding [Shewanella frigidimarina NCIMB 400] Length = 144 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 18/92 (19%) Query: 26 VGAVAVLNNKIISRAGN------------RNRELKDV-TAHAEILAIRMGCRILSQEILP 72 VGAV NN+I+S N NRE+K + T HAE AI R LS Sbjct: 27 VGAVITENNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILHAKRDLSS---- 82 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +++VT PC CAA I +R ++ N Sbjct: 83 -CEIWVTHFPCPNCAAKIIQTGLRAVHSPKPN 113 >gi|317485112|ref|ZP_07943994.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bilophila wadsworthia 3_1_6] gi|316923647|gb|EFV44851.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bilophila wadsworthia 3_1_6] Length = 194 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 2/89 (2%) Query: 16 QNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74 ++ A NE P G V A + +++ N D AH E+ R + E L + Sbjct: 39 KSLAYGNE-PYGCVLAGPSGELLLEGLNTCLTEHDPLAHGEMNLCREAAQKYDPEFLWQC 97 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGAS 103 +YV PC+MC AI I R+ + S Sbjct: 98 SIYVPGSPCSMCTCAIFYTNIGRIVHATS 126 >gi|307543864|ref|YP_003896343.1| hypothetical protein HELO_1275 [Halomonas elongata DSM 2581] gi|307215888|emb|CBV41158.1| hypothetical protein HELO_1275 [Halomonas elongata DSM 2581] Length = 157 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 25 PVGAVAV-LNNKIISRAGNRNR-ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 P G+V V + K+++ +RNR D T H E R L E +Y + E Sbjct: 27 PFGSVLVGADGKVLAE--DRNRIAGGDSTRHPEFALARWAAENLPAESRAAATVYTSGEH 84 Query: 83 CTMCAAAISLARIRRLYYGASN 104 C MCAAA + + R+ Y +S Sbjct: 85 CPMCAAAHAWVGLGRIVYASST 106 >gi|255655719|ref|ZP_05401128.1| riboflavin biosynthesis protein [Clostridium difficile QCD-23m63] gi|296451726|ref|ZP_06893457.1| riboflavin biosynthesis protein RibD [Clostridium difficile NAP08] gi|296878970|ref|ZP_06902968.1| riboflavin biosynthesis protein RibD [Clostridium difficile NAP07] gi|296259427|gb|EFH06291.1| riboflavin biosynthesis protein RibD [Clostridium difficile NAP08] gi|296429997|gb|EFH15846.1| riboflavin biosynthesis protein RibD [Clostridium difficile NAP07] Length = 370 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 21/147 (14%) Query: 7 FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A+E A+N N P VG V V ++ II + + K + HAE+ AI Sbjct: 13 YMKKAIELAKNGEGFVNPNPLVGCVIVKDDYIIGKGYHE----KFGSNHAEVNAINS--- 65 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +++ L + LYV LEPC+ C I +I+R+ +P NG + Sbjct: 66 --AKQSLKDSTLYVNLEPCSHYGKTPPCVDKIIQNKIKRVVISTLDPNPLVCGNGVK--- 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145 ++ ++ G E+ +R + + FF Sbjct: 121 -KLRDNNIDVTVGTLEEEARDLNEVFF 146 >gi|257067270|ref|YP_003153525.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810] gi|256558088|gb|ACU83935.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810] Length = 163 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%) Query: 25 PVGAVAVLNNKIISRAGNRNR-ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P G++ +++ R +RNR + D T H E R LS + +Y + E C Sbjct: 32 PFGSL-LVDADGTERFADRNRVQGGDHTRHPEFEIARWAANHLSPQERARATVYTSGEHC 90 Query: 84 TMCAAAISLARIRRLYYGASN 104 MCAAA + + R+ Y +S Sbjct: 91 PMCAAAHAWVGLGRIVYASST 111 >gi|156742645|ref|YP_001432774.1| CMP/dCMP deaminase [Roseiflexus castenholzii DSM 13941] gi|156233973|gb|ABU58756.1| CMP/dCMP deaminase zinc-binding [Roseiflexus castenholzii DSM 13941] Length = 190 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAI-----RMGCRILSQEILPEVDLYVTLEPCTMCA 87 + ++S N L + HAE++A+ R+G L + DL + EPC MC Sbjct: 61 DGVLVSAGVNSVTRLTNAVLHAEVVALMFAQARVGAYTL-RAANTSYDLVTSCEPCAMCL 119 Query: 88 AAISLARIRRLYYGASNPKGG--GIENGTQF 116 AI + ++RL GA+ G + G F Sbjct: 120 GAILWSGVQRLVCGATRDDAERIGFDEGPVF 150 >gi|269958267|ref|YP_003328054.1| riboflavin biosynthesis protein [Anaplasma centrale str. Israel] gi|269848096|gb|ACZ48740.1| riboflavin biosynthesis protein [Anaplasma centrale str. Israel] Length = 365 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 63/149 (42%), Gaps = 18/149 (12%) Query: 7 FMSCALEEAQNAALRNEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FMS AL A+ L N P V V+ N S G R HAE++A+R Sbjct: 7 FMSIALRLARRG-LGNTYPNPTVGCVITNGAGSIVG-RGWTAMGGRPHAEVVALRH---- 60 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + E YVTLEPC C AA+ A +RR+ A +P G + + Sbjct: 61 -AGEAAAGSTAYVTLEPCCHRGQTGPCTAALINAGVRRVVIAALDPDERVSGKGAKSLSE 119 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148 A E+ G+ +Q++ ++ FF + Sbjct: 120 A----GVEVKLGVLQQQAEELNAGFFYSK 144 >gi|149187995|ref|ZP_01866290.1| pyrimidine reductase [Vibrio shilonii AK1] gi|148837983|gb|EDL54925.1| pyrimidine reductase [Vibrio shilonii AK1] Length = 369 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 19/128 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V LNN+++ ++ K HAE+ A+RM E YVTLEPC+ Sbjct: 32 VGCVITLNNEVVGEGYHK----KAGEPHAEVHALRMAA-----ERAKGATAYVTLEPCSH 82 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA + A + ++ S+P G A E+ G+ EQ +R Sbjct: 83 YGRTPPCAEGLIKAGVSKVICAMSDPNPQVAGRGFNMLREAGI----EVSVGLLEQDARA 138 Query: 140 IIQDFFKE 147 + F K+ Sbjct: 139 LNPGFLKK 146 >gi|315657966|ref|ZP_07910840.1| riboflavin biosynthesis protein RibD [Staphylococcus lugdunensis M23590] gi|315497002|gb|EFU85323.1| riboflavin biosynthesis protein RibD [Staphylococcus lugdunensis M23590] Length = 383 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 11/84 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 K ++++S A++ A+ + + PVGAV V N +II + LK HAE+ AI Sbjct: 36 KLDLYLSKAIQLAKMVKGQTGVNPPVGAVVVKNGRIIGLGAH----LKQGEKHAEVQAID 91 Query: 61 MGCRILSQEILPEVDLYVTLEPCT 84 M + + +YV+L+PCT Sbjct: 92 M-----AGDEAQGATIYVSLQPCT 110 >gi|313200621|ref|YP_004039279.1| riboflavin biosynthesis protein ribd [Methylovorus sp. MP688] gi|312439937|gb|ADQ84043.1| riboflavin biosynthesis protein RibD [Methylovorus sp. MP688] Length = 368 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 15/86 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V + +I+ + LK HAE+ A+R + ++ D YVTLEPC+ Sbjct: 30 VGCVIVKDGQIVGEGAH----LKAGEPHAEVHALRQ-----AGDLAQGADAYVTLEPCSH 80 Query: 86 ------CAAAISLARIRRLYYGASNP 105 CA A+ A ++R+ +P Sbjct: 81 HGRTPPCADALIKAGVKRVVAAMQDP 106 >gi|222151486|ref|YP_002560642.1| late competence operon required for DNA binding and uptake ComEB [Macrococcus caseolyticus JCSC5402] gi|222120611|dbj|BAH17946.1| late competence operon required for DNA binding and uptake ComEB [Macrococcus caseolyticus JCSC5402] Length = 153 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 30/112 (26%) Query: 12 LEEAQNAALRN---EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 + ++Q ALR+ + VGA V NN+II AG N + E+ I GC + Sbjct: 11 MAQSQLLALRSTCTRLSVGATIVKNNRII--AGGYNGSVS-----GEVHCIDAGCYVEGG 63 Query: 69 EILPEV--------------------DLYVTLEPCTMCAAAISLARIRRLYY 100 + + D+YVT PC C ++ A I+++YY Sbjct: 64 HCIRTIHAEMNALLQCAKMGVTTEGADIYVTHFPCIHCTKSLIQAGIKKIYY 115 >gi|59714100|ref|YP_206875.1| deoxycytidylate deaminase [Vibrio fischeri ES114] gi|197337866|ref|YP_002158583.1| RibG [Vibrio fischeri MJ11] gi|59482348|gb|AAW87987.1| deoxycytidylate deaminase [Vibrio fischeri ES114] gi|197315118|gb|ACH64567.1| RibG [Vibrio fischeri MJ11] Length = 147 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 18/87 (20%) Query: 26 VGAVAVLNNKIIS------------RAGNRNRELKDV-TAHAEILAIRMGCRILSQEILP 72 VGAV +N+I+S A RE+K + T HAE AI + ++ L Sbjct: 27 VGAVITKHNRIVSVGFNGYPHGVSDSADTDEREIKYLKTLHAEENAI-----LFAKRDLE 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLY 99 D++VT PC CAA I I ++Y Sbjct: 82 GCDIWVTHFPCPNCAAKIIQTGISKVY 108 >gi|289550476|ref|YP_003471380.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Staphylococcus lugdunensis HKU09-01] gi|289180008|gb|ADC87253.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Staphylococcus lugdunensis HKU09-01] Length = 368 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 11/84 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 K ++++S A++ A+ + + PVGAV V N +II + LK HAE+ AI Sbjct: 21 KLDLYLSKAIQLAKMVKGQTGVNPPVGAVVVKNGRIIGLGAH----LKQGEKHAEVQAID 76 Query: 61 MGCRILSQEILPEVDLYVTLEPCT 84 M + +YV+L+PCT Sbjct: 77 MAG-----DEAQGATIYVSLQPCT 95 >gi|332982092|ref|YP_004463533.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Mahella australiensis 50-1 BON] gi|332699770|gb|AEE96711.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Mahella australiensis 50-1 BON] Length = 363 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 67/156 (42%), Gaps = 35/156 (22%) Query: 6 VFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-- 61 +FM ALE A+ N P VGAV V +II ++ K HAEI A+R Sbjct: 5 IFMQRALELARMGWGTTNPNPMVGAVIVKGGRIIGEGYHK----KAGEPHAEINALREAG 60 Query: 62 -GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGI 110 G R + +YVTLEPC+ CA A+ A ++ + +P G GI Sbjct: 61 EGARGST--------VYVTLEPCSHFGRTPPCADALVKAGVKEVVIAMEDPNPRVAGRGI 112 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A ++ GI EQ +R++ + F K Sbjct: 113 N--------ALRQAGIKVITGIMEQEARRLNEVFIK 140 >gi|124513702|ref|XP_001350207.1| cytidine and deoxycytidylate deaminase, putative [Plasmodium falciparum 3D7] gi|23615624|emb|CAD52616.1| cytidine and deoxycytidylate deaminase, putative [Plasmodium falciparum 3D7] Length = 232 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 14/32 (43%), Positives = 19/32 (59%) Query: 78 VTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 VT EPC MC A+ L I+ +Y+ N + GG Sbjct: 148 VTCEPCIMCVYALKLIGIKNIYFCCLNERFGG 179 >gi|153836433|ref|ZP_01989100.1| diaminohydroxyphosphoribosylamino-pyrimidine deaminase [Vibrio parahaemolyticus AQ3810] gi|260901767|ref|ZP_05910162.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus AQ4037] gi|149750335|gb|EDM61080.1| diaminohydroxyphosphoribosylamino-pyrimidine deaminase [Vibrio parahaemolyticus AQ3810] gi|308108841|gb|EFO46381.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus AQ4037] Length = 141 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 33/123 (26%) Query: 7 FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRA------GNRNRELKDVTAHAEILA 58 FM ALE ++NA + PVG V V +N+I+S GN HAE+ A Sbjct: 5 FMRRALEVSKNALPECQPNPPVGCVLVKDNQIVSEGHTQAIGGN----------HAEVEA 54 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108 + Q L V YVTLEPC+ CA + + I ++ +P G Sbjct: 55 LNA-----YQGSLESVTAYVTLEPCSFVGRTPACAVTLVKSGIGKVVVAMLDPDPRNSGR 109 Query: 109 GIE 111 GIE Sbjct: 110 GIE 112 >gi|117923484|ref|YP_864101.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Magnetococcus sp. MC-1] gi|117607240|gb|ABK42695.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Magnetococcus sp. MC-1] Length = 376 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 17/111 (15%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 K +M AL A R VG V V ++II R +R K HAE+ A+R Sbjct: 8 KDRAYMDHALRLAARGLGRTRPNPTVGCVIVKEDRIIGRGWHR----KAGGPHAEVEALR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 M + E YVTLEPC+ C + A IRR+ +P Sbjct: 64 M-----AGEAARGATAYVTLEPCSHHGRTPPCCEGLIKAGIRRVVAAMEDP 109 >gi|229524866|ref|ZP_04414271.1| deoxycytidylate deaminase-related protein [Vibrio cholerae bv. albensis VL426] gi|229338447|gb|EEO03464.1| deoxycytidylate deaminase-related protein [Vibrio cholerae bv. albensis VL426] Length = 506 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 7/80 (8%) Query: 47 LKDVT-----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 +KD+T HAE+ AI R S + DLY T PC CA I + I+R+ Y Sbjct: 346 IKDITEYGRVVHAEMEAILACAR--SDISTKDADLYCTTFPCHNCAKHIVASGIKRVVYV 403 Query: 102 ASNPKGGGIENGTQFYTLAT 121 PK ++ + TL + Sbjct: 404 EPYPKSKALDFHSDSITLES 423 >gi|28900546|ref|NP_800201.1| putative riboflavin deaminase [Vibrio parahaemolyticus RIMD 2210633] gi|260365428|ref|ZP_05777965.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus K5030] gi|260877493|ref|ZP_05889848.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus AN-5034] gi|260894835|ref|ZP_05903331.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus Peru-466] gi|28808926|dbj|BAC62034.1| putative riboflavin deaminase [Vibrio parahaemolyticus RIMD 2210633] gi|308085328|gb|EFO35023.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus Peru-466] gi|308090602|gb|EFO40297.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus AN-5034] gi|308114425|gb|EFO51965.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus K5030] Length = 141 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 33/123 (26%) Query: 7 FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRA------GNRNRELKDVTAHAEILA 58 FM ALE ++NA + PVG V V +N+I+S GN HAE+ A Sbjct: 5 FMRRALEVSKNALPECQPNPPVGCVLVKDNQIVSEGHTQAIGGN----------HAEVEA 54 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108 + Q L V YVTLEPC+ CA + + I ++ +P G Sbjct: 55 LNA-----YQGSLESVTAYVTLEPCSFVGRTPACAVTLVKSGIGKVVVAMLDPDPRNSGR 109 Query: 109 GIE 111 GIE Sbjct: 110 GIE 112 >gi|328470490|gb|EGF41401.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio parahaemolyticus 10329] Length = 141 Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 33/123 (26%) Query: 7 FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRA------GNRNRELKDVTAHAEILA 58 FM ALE ++NA + PVG V V +N+I+S GN HAE+ A Sbjct: 5 FMRRALEVSKNALPECQPNPPVGCVLVKDNQIVSEGHTQAIGGN----------HAEVEA 54 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108 + Q L V YVTLEPC+ CA + + I ++ +P G Sbjct: 55 LNA-----YQGSLESVTAYVTLEPCSFVGRTPACAVTLVKSGIGKVVVAMLDPDPRNSGR 109 Query: 109 GIE 111 GIE Sbjct: 110 GIE 112 >gi|254229831|ref|ZP_04923237.1| Pyrimidine deaminase [Vibrio sp. Ex25] gi|262395603|ref|YP_003287456.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio sp. Ex25] gi|151937667|gb|EDN56519.1| Pyrimidine deaminase [Vibrio sp. Ex25] gi|262339197|gb|ACY52991.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio sp. Ex25] Length = 141 Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 33/123 (26%) Query: 7 FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRA------GNRNRELKDVTAHAEILA 58 FM ALE ++NA + PVG V V +N+I+S GN HAE+ A Sbjct: 5 FMRRALEVSKNALPECQPNPPVGCVLVKDNQIVSEGHTQAIGGN----------HAEVEA 54 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108 + Q L V YVTLEPC+ CA + + I ++ +P G Sbjct: 55 LNA-----YQGSLESVTAYVTLEPCSFVGRTPACAVTLVKSGIGKVVVAMLDPDPRNSGR 109 Query: 109 GIE 111 GIE Sbjct: 110 GIE 112 >gi|465877|sp|P33968|YLXG_VIBFI RecName: Full=Uncharacterized deaminase in luxG 3'region gi|396216|emb|CAA49769.1| unnamed protein product [Aliivibrio fischeri] gi|119116595|dbj|BAF40863.1| putative deoxycytidylate deaminase [Vibrio fischeri] Length = 147 Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 18/87 (20%) Query: 26 VGAVAVLNNKIIS------------RAGNRNRELKDV-TAHAEILAIRMGCRILSQEILP 72 VGAV +N+I+S A RE+K + T HAE AI + ++ L Sbjct: 27 VGAVITKHNRIVSVGFNGYPHGVSDSADTDEREIKYLKTLHAEENAI-----LFAKRDLE 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLY 99 D++VT PC CAA I I ++Y Sbjct: 82 GCDIWVTHFPCPNCAAKIIQTGISKVY 108 >gi|163783070|ref|ZP_02178065.1| riboflavin specific deaminase [Hydrogenivirga sp. 128-5-R1-1] gi|159881750|gb|EDP75259.1| riboflavin specific deaminase [Hydrogenivirga sp. 128-5-R1-1] Length = 362 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 23/103 (22%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK 106 HAE++A+ + E LYVTLEPCT C A+ A IR+ +P Sbjct: 50 HAEVVALEQ-----AGEKAKGSTLYVTLEPCTHFGRTPPCTDALIRAGIRKAVVAVKDPN 104 Query: 107 ----GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G GIE L E+ G+ E+ +R++ +DFF Sbjct: 105 PVVGGKGIER------LREAGLDVEV--GVLEEEARELNEDFF 139 >gi|21229130|ref|NP_635052.1| deoxycytidylate deaminase [Methanosarcina mazei Go1] gi|20907690|gb|AAM32724.1| Deoxycytidylate deaminase [Methanosarcina mazei Go1] Length = 172 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 6/97 (6%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A+ AQ + P+G V + + ++I+ + N + D H E AIR R Sbjct: 23 IMCIAVLLAQKSYDEGGCPIGGVIIDSKTHRIVGKGHNTLVQDNDPYNHGETSAIRDAGR 82 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + ++ TL PC +CA I + + R+ G Sbjct: 83 ----QDFSNATIFTTLSPCDVCATLIYMRQFDRVVIG 115 >gi|28901047|ref|NP_800702.1| putative deoxycytidylate deaminase [Vibrio parahaemolyticus RIMD 2210633] gi|260362476|ref|ZP_05775409.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030] gi|260879896|ref|ZP_05892251.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Vibrio parahaemolyticus AN-5034] gi|260894571|ref|ZP_05903067.1| protein RibG [Vibrio parahaemolyticus Peru-466] gi|28809560|dbj|BAC62535.1| putative deoxycytidylate deaminase [Vibrio parahaemolyticus RIMD 2210633] gi|308086410|gb|EFO36105.1| protein RibG [Vibrio parahaemolyticus Peru-466] gi|308091689|gb|EFO41384.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Vibrio parahaemolyticus AN-5034] gi|308113341|gb|EFO50881.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030] Length = 154 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 40/87 (45%), Gaps = 18/87 (20%) Query: 26 VGAVAVLNNKIISRAGN------------RNRELKDV-TAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N RELK + T HAE AI + S+ L Sbjct: 27 VGAVITNQNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLY 99 D++VT PC CAA I I R++ Sbjct: 82 GCDIWVTHFPCPNCAAKIIQTGISRVH 108 >gi|226355049|ref|YP_002784789.1| riboflavin biosynthesis protein [Deinococcus deserti VCD115] gi|226317039|gb|ACO45035.1| putative Riboflavin biosynthesis protein ribD [Deinococcus deserti VCD115] Length = 368 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 19/113 (16%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL EA R PVG V V + +++ R G R + HAE+ A+R Sbjct: 11 YMRLALNEAARGMGRTSPNPPVGCVIVRDGQVVGR-GFHPRAGE---PHAEVFALRE--- 63 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGA--SNPKGGG 109 + E YVTLEPC+ CA A+ A + ++ A NP+ GG Sbjct: 64 --AGEYARGATAYVTLEPCSHFGRTPPCADALVAAGVSQVVIAALDPNPRVGG 114 >gi|310800736|gb|EFQ35629.1| cytidine and deoxycytidylate deaminase zinc-binding region [Glomerella graminicola M1.001] Length = 169 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 20/143 (13%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR--------ELKDVTAHAEILAIRMGC 63 +E A+ A + P G+V V N I R +RNR +D T H E Sbjct: 14 IELAKEALDAGDDPFGSVLVGANGSIIRE-DRNRVNTGESGDGRRDGTLHPEFTLAHWAQ 72 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP------KGGGIENGTQFY 117 LS E + +Y + E C MCAAA + + + + +S+ K G+E G + Sbjct: 73 LNLSAEERAKASVYTSGEHCPMCAAAHAWVGLGPIVFVSSSAQFSAWLKEFGVERGAKVK 132 Query: 118 TLATCHHSPEI-----YPGISEQ 135 L +P I PG+ E+ Sbjct: 133 PLPINEVAPNIPFQGPIPGLDEE 155 >gi|238695103|ref|YP_002922297.1| dCMP deaminase [Enterobacteria phage JSE] gi|220029239|gb|ACL78174.1| dCMP deaminase [Enterobacteria phage JSE] Length = 168 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 HAE+ AI R S + ++ T PC CA AI+ + I+ LYY + + GG Sbjct: 83 HAELNAILFAAR--SGVSIEGASMWCTASPCPDCAKAIANSGIKHLYYCDTYDRNGG 137 >gi|227548982|ref|ZP_03979031.1| guanine deaminase [Corynebacterium lipophiloflavum DSM 44291] gi|227078933|gb|EEI16896.1| guanine deaminase [Corynebacterium lipophiloflavum DSM 44291] Length = 150 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 44/95 (46%), Gaps = 15/95 (15%) Query: 11 ALEEAQNAALRNEIPVGAVAVL-------NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 A+E A +A P G V V +N+++SR D +AHAEI AIR Sbjct: 7 AVEIAVESARTGGGPFGCVVVTERGVYEGHNEVVSRC--------DPSAHAEIQAIRAAA 58 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 R L LY + +PC MC AAI ARI + Sbjct: 59 RAQRSHELSGAVLYASGQPCPMCFAAIRWARIDEV 93 >gi|126139263|ref|XP_001386154.1| DRAP deaminase [Scheffersomyces stipitis CBS 6054] gi|126093436|gb|ABN68125.1| DRAP deaminase [Scheffersomyces stipitis CBS 6054] Length = 585 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 12/108 (11%) Query: 7 FMSCALEEAQNA-ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM +LE A + + VGAV V K++ A +REL T HAE A+ Sbjct: 436 FMELSLEMANKCDETQTQYNVGAVLVNRGKVL--ATGHSRELPGNT-HAEQCALEKYFEE 492 Query: 66 LSQEILPE-VDLYVTLEPCTM-------CAAAISLARIRRLYYGASNP 105 + +P+ ++Y T+EPCT+ CA I I+ + G P Sbjct: 493 TGKREIPKGTEIYTTMEPCTLRLSGNIPCADRIIGTTIKTCFVGIVEP 540 >gi|5726586|gb|AAD48481.1|AF170104_9 unknown [Aliivibrio fischeri] Length = 124 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 18/87 (20%) Query: 26 VGAVAVLNNKIIS------------RAGNRNRELKDV-TAHAEILAIRMGCRILSQEILP 72 VGAV +N+I+S A RE+K + T HAE AI + ++ L Sbjct: 4 VGAVITKHNRIVSVGFNGYPHGVSDSADTDEREIKYLKTLHAEENAI-----LFAKRDLE 58 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLY 99 D++VT PC CAA I I ++Y Sbjct: 59 GCDIWVTHFPCPNCAAKIIQTGISKVY 85 >gi|315639223|ref|ZP_07894385.1| riboflavin biosynthesis protein RibD [Campylobacter upsaliensis JV21] gi|315480549|gb|EFU71191.1| riboflavin biosynthesis protein RibD [Campylobacter upsaliensis JV21] Length = 327 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 68/177 (38%), Gaps = 46/177 (25%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVL----NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +MS AL+EA P AV + NN+I+S + K AHAE+ AI+ Sbjct: 4 FYMSLALKEAWKYQFLT-YPNPAVGCVILDKNNQILSIKAHE----KQGEAHAELNAIKE 58 Query: 62 GCRILS--------------------QEILPEVDLYVTLEPCTM------CAAAISLARI 95 ++L Q++L +VTLEPC CA S Sbjct: 59 ALKLLKPEFNFPKEPNALHEFILTNHQKLLQNATAFVTLEPCAHQGKTPPCAKLFSTLEF 118 Query: 96 RRLYYGASNPK---GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 ++++ + GG E Q L GI E+ R++++ F K ++ Sbjct: 119 KKVFVSVKDENQIASGGAEFLRQNGILVEM--------GILEKEGRELLKPFLKWQK 167 >gi|260063122|ref|YP_003196202.1| riboflavin biosynthesis protein RibD [Robiginitalea biformata HTCC2501] gi|88784691|gb|EAR15861.1| riboflavin biosynthesis protein RibD [Robiginitalea biformata HTCC2501] Length = 350 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 9/59 (15%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNP 105 HAE+ AIR + LP+ LYVTLEPC C I + IRR+ G +P Sbjct: 51 HAEVNAIR---SVADPGKLPDSTLYVTLEPCCHHGKTPPCTDRIIESGIRRVVVGLPDP 106 >gi|332290249|ref|YP_004421101.1| hypothetical protein UMN179_02191 [Gallibacterium anatis UMN179] gi|330433145|gb|AEC18204.1| conserved hypothetical protein [Gallibacterium anatis UMN179] Length = 372 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ + FM+ A+E A+ VG V V N +I+ + + K HAE++A+ Sbjct: 8 QQDHQFMALAIELAKKGRFTCTPNPAVGCVLVKNGEIVGKGYHE----KAGEPHAEVMAM 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 R + E YVTLEPC+ CA + A ++R+ +P G Sbjct: 64 RE-----AGEKANGATAYVTLEPCSHYGRTPPCAKGLIEAGVKRVVAAMQDPNPQVAGRG 118 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + A E G+ +Q++ Q+ + F K R Sbjct: 119 LKMLADAGI----ETAVGLLQQQAEQLNKGFLKRMR 150 >gi|283769499|ref|ZP_06342395.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bulleidia extructa W1219] gi|283103767|gb|EFC05153.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bulleidia extructa W1219] Length = 157 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 5/70 (7%) Query: 38 SRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 SR GN HAE+ AI + S+ + + +YV+L PC CA AI + IRR Sbjct: 58 SREGNVLETKYPYVVHAELNAI-----LNSKWPVKDCTIYVSLFPCNECAKAIIQSGIRR 112 Query: 98 LYYGASNPKG 107 + Y + G Sbjct: 113 VVYESDKYNG 122 >gi|157311519|ref|YP_001469562.1| deoxycytidylate deaminase [Enterobacteria phage Phi1] gi|149380723|gb|ABR24728.1| Cd dCMP deaminase [Enterobacteria phage Phi1] Length = 168 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 HAE+ AI R S + ++ T PC CA AI+ + I+ LYY + + GG Sbjct: 83 HAELNAILFAAR--SGVSIEGASMWCTASPCPDCAKAIANSGIKHLYYCDTYDRNGG 137 >gi|154491828|ref|ZP_02031454.1| hypothetical protein PARMER_01449 [Parabacteroides merdae ATCC 43184] gi|154088069|gb|EDN87114.1| hypothetical protein PARMER_01449 [Parabacteroides merdae ATCC 43184] Length = 395 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 13/86 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V KII +R K AHAE+ A+ + + +L + +YV+LEPC+ Sbjct: 76 VGAVIVHKGKIIGEGFHR----KCGEAHAEVNAV---ASVRDEALLRDSTIYVSLEPCSH 128 Query: 86 ------CAAAISLARIRRLYYGASNP 105 CA I I R+ G +P Sbjct: 129 YGKTPPCAELIIRKGIPRVVVGTLDP 154 >gi|127513983|ref|YP_001095180.1| CMP/dCMP deaminase, zinc-binding [Shewanella loihica PV-4] gi|126639278|gb|ABO24921.1| CMP/dCMP deaminase, zinc-binding [Shewanella loihica PV-4] Length = 149 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 18/78 (23%) Query: 26 VGAVAVLNNKIIS------------RAGNRNRELKDV-TAHAEILAIRMGCRILSQEILP 72 VGAV NN+I+S A NRE+K + T HAE AI R LS Sbjct: 27 VGAVITENNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILYAKRDLSS---- 82 Query: 73 EVDLYVTLEPCTMCAAAI 90 +++VT PC CAA I Sbjct: 83 -CEIWVTHFPCPNCAAKI 99 >gi|281491487|ref|YP_003353467.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/ 5-amino-6-(5-phosphoribosylamino)uracil reductase [Lactococcus lactis subsp. lactis KF147] gi|281375205|gb|ADA64718.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase/ 5-amino-6-(5-phosphoribosylamino)uracil reductase [Lactococcus lactis subsp. lactis KF147] Length = 362 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 50/113 (44%), Gaps = 17/113 (15%) Query: 1 MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 MKK +M A+ A+ N P VGA+ V +II + + K AHAEI A Sbjct: 1 MKKDEYYMDLAIVLAKKGGGNVNPNPQVGALIVKEGRIIGQGYHE----KYGEAHAEINA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + C E LYVTLEPC C AI RI+R+ G +P Sbjct: 57 FK-DCN----ESPEGATLYVTLEPCAHQGKQPPCFEAIIKNRIKRVVIGHLDP 104 >gi|159898944|ref|YP_001545191.1| riboflavin biosynthesis protein RibD [Herpetosiphon aurantiacus ATCC 23779] gi|159891983|gb|ABX05063.1| riboflavin biosynthesis protein RibD [Herpetosiphon aurantiacus ATCC 23779] Length = 371 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 15/86 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V +I+ R + AHAE++A+R + E LYVTLEPCT+ Sbjct: 30 VGAVVVQAGQIVGRGHTQPAG----QAHAEVMALRE-----AGEQARGASLYVTLEPCTI 80 Query: 86 ------CAAAISLARIRRLYYGASNP 105 C AI A I + + +P Sbjct: 81 WGRTPPCTDAIIAAGIAEVIIASRDP 106 >gi|270157224|ref|ZP_06185881.1| riboflavin biosynthesis protein RibD [Legionella longbeachae D-4968] gi|289164378|ref|YP_003454516.1| Riboflavin biosynthesis protein RibD [Legionella longbeachae NSW150] gi|269989249|gb|EEZ95503.1| riboflavin biosynthesis protein RibD [Legionella longbeachae D-4968] gi|288857551|emb|CBJ11389.1| Riboflavin biosynthesis protein RibD [Legionella longbeachae NSW150] Length = 357 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 23/110 (20%) Query: 7 FMSCALEEA---QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 F+ ALE+A Q N VGAVAV N II++A +R T HAE L Sbjct: 5 FLLAALEQARLGQGHCAPNPC-VGAVAVQNGTIIAQAHHRGAG----TPHAEQL------ 53 Query: 64 RILSQ--EILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 +L+Q P + LY++LEPC C AI + + +G +P Sbjct: 54 -LLTQIPPKTPGICLYISLEPCNHWGRTPPCVDAIINHGVEEVVFGYLDP 102 >gi|15614117|ref|NP_242420.1| riboflavin specific deaminase [Bacillus halodurans C-125] gi|10174171|dbj|BAB05273.1| riboflavin specific deaminase(diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase) [Bacillus halodurans C-125] Length = 368 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 15/104 (14%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 ++ AL E+ VGAV V + +I+ + LK HAE+ AIRM + Sbjct: 9 LALALAESARGQTSPNPLVGAVVVKDGQIVGMGAH----LKAGEPHAEVHAIRM-----A 59 Query: 68 QEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 E YVTLEPC+ CA + A + R+ +P Sbjct: 60 GEKAKGATAYVTLEPCSHYGKTPPCADLLIEAGVARVVIATEDP 103 >gi|302387516|ref|YP_003823338.1| riboflavin biosynthesis protein RibD [Clostridium saccharolyticum WM1] gi|302198144|gb|ADL05715.1| riboflavin biosynthesis protein RibD [Clostridium saccharolyticum WM1] Length = 368 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 44/118 (37%), Positives = 53/118 (44%), Gaps = 21/118 (17%) Query: 7 FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A+ AQ L N P VGAV V +II G R HAE AI + CR Sbjct: 6 YMGMAVRLAQKGCGLVNPNPMVGAVLVKEGRIIGE-GYYERY---GALHAERNAI-LNCR 60 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIEN 112 E LYVTLEPC C AI + IRR+ G+ +P KG GI+ Sbjct: 61 ----ESPEGTTLYVTLEPCCHHGKTPPCTEAILQSGIRRVVIGSHDPNPLVKGKGIKQ 114 >gi|218264485|ref|ZP_03478318.1| hypothetical protein PRABACTJOHN_04018 [Parabacteroides johnsonii DSM 18315] gi|218221978|gb|EEC94628.1| hypothetical protein PRABACTJOHN_04018 [Parabacteroides johnsonii DSM 18315] Length = 354 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 13/86 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V KII +R K AHAE+ A+ + + +L + +YV+LEPC+ Sbjct: 35 VGAVIVHKGKIIGEGFHR----KCGEAHAEVNAV---ASVRDEALLRDSTIYVSLEPCSH 87 Query: 86 ------CAAAISLARIRRLYYGASNP 105 CA I I R+ G +P Sbjct: 88 YGKTPPCAELIIKKGIPRVVVGTLDP 113 >gi|300769800|ref|ZP_07079680.1| riboflavin biosynthesis protein RibD [Sphingobacterium spiritivorum ATCC 33861] gi|300763251|gb|EFK60067.1| riboflavin biosynthesis protein RibD [Sphingobacterium spiritivorum ATCC 33861] Length = 350 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 19/100 (19%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL---SQEILPEVDLYVTLEP 82 VGAV V NKII HAE+ AI+ + +L E D+YV+LEP Sbjct: 28 VGAVIVHENKIIGEGYTSPYG----GPHAEVNAIQQVKDQYPDSADRLLEESDMYVSLEP 83 Query: 83 CTM------CAAAISLARIRRLYYGASNP------KGGGI 110 C CA I +R++Y +P KG GI Sbjct: 84 CAHFGKTPPCANLIVKHNLRKVYIACMDPFAQVNGKGLGI 123 >gi|183601038|ref|ZP_02962531.1| hypothetical protein PROSTU_04659 [Providencia stuartii ATCC 25827] gi|188019376|gb|EDU57416.1| hypothetical protein PROSTU_04659 [Providencia stuartii ATCC 25827] Length = 371 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 19/114 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 +++ ++M+ ALE AQ P VG V V + +I+ ++ K HAE+ Sbjct: 2 IEQDRIYMARALELAQKGRFTTS-PNPNVGCVIVRDGEIVGEGYHQ----KAGEPHAEVH 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 A+RM + E YVTLEPC+ CA A+ A +RR+ +P Sbjct: 57 ALRM-----AGEKAKGATAYVTLEPCSHHGRTPPCAEALINAGVRRVVAAMQDP 105 >gi|159107798|ref|XP_001704175.1| Hypothetical protein GL50803_8208 [Giardia lamblia ATCC 50803] gi|157432229|gb|EDO76501.1| Hypothetical protein GL50803_8208 [Giardia lamblia ATCC 50803] Length = 299 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Query: 46 ELKDVTAHAEILAIRMGCRILSQE----ILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 ++ D+ H AI + +++ +L D++ EPC C+ + AR++R++Y Sbjct: 204 KISDMLRHPVYTAIEQAMKQAAEDDKAYLLTGYDVFALEEPCIFCSMCLLHARVKRVFYS 263 Query: 102 ASNPKGGGIENGTQFYTLATCHH 124 A GG+ +L +H Sbjct: 264 AFMGHNGGLNESLMVPSLPGVNH 286 >gi|323699086|ref|ZP_08110998.1| riboflavin biosynthesis protein RibD [Desulfovibrio sp. ND132] gi|323459018|gb|EGB14883.1| riboflavin biosynthesis protein RibD [Desulfovibrio desulfuricans ND132] Length = 364 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 17/79 (21%) Query: 76 LYVTLEPCTM------CAAAISLARIRRLYYGASNPK---GGGIENGTQFYTLATCHHSP 126 +YVTLEPC C A+ A + ++ G +P GG+E H Sbjct: 65 MYVTLEPCNHHGKTPPCTEALIEAGVAEVFVGTRDPNPVAAGGVEKLRA--------HGI 116 Query: 127 EIYPGISEQRSRQIIQDFF 145 E+ G+ EQ R +I DF Sbjct: 117 EVTVGVLEQPCRDLIADFL 135 >gi|159184765|ref|NP_354460.2| hypothetical protein Atu1453 [Agrobacterium tumefaciens str. C58] gi|159140053|gb|AAK87245.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 195 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 1/85 (1%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74 A+ +L N++ GA + + + N EL++ H E+ ++ + + ++ Sbjct: 23 ARGVSLGNKV-FGAAILRKSDLSLVVAETNNELENPLWHGEVHTLKRFYELGEKPNTKDL 81 Query: 75 DLYVTLEPCTMCAAAISLARIRRLY 99 T EPCTMC +AI+ A Y Sbjct: 82 IFLSTHEPCTMCMSAITWAGFDNFY 106 >gi|23098113|ref|NP_691579.1| hypothetical protein OB0658 [Oceanobacillus iheyensis HTE831] gi|22776338|dbj|BAC12614.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 158 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 17/137 (12%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71 +E A+ A + P G+V V N + + D T H E + ++ E Sbjct: 14 IELAKAALETGDEPFGSVLVSANGDVLAEDYNHVSGGDHTQHPEFALAKWAAGNMTSEER 73 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 + +Y + E C MCAAA + R+ Y +S+ E Q+ EI G Sbjct: 74 GKATVYTSGEHCPMCAAAHGWVGLGRIVYASSS------EQLVQWLN--------EI--G 117 Query: 132 ISEQRSRQI-IQDFFKE 147 ++E R R + IQD ++ Sbjct: 118 VTESRVRNLPIQDVIRD 134 >gi|226314399|ref|YP_002774295.1| riboflavin biosynthesis protein RibD [Brevibacillus brevis NBRC 100599] gi|226097349|dbj|BAH45791.1| riboflavin biosynthesis protein RibD [Brevibacillus brevis NBRC 100599] Length = 368 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 15/88 (17%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M++ + +M ALE A++A R + VGAV V + I+ + L+ HAE+ Sbjct: 1 MEQDSKYMDLALELARSA--RGQTSPNPMVGAVIVKDGTIVGMGAH----LRAGEPHAEV 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCT 84 A+RM + E +YVTLEPC+ Sbjct: 55 HALRM-----AGEKAQGATVYVTLEPCS 77 >gi|254456442|ref|ZP_05069871.1| riboflavin biosynthesis protein RibD [Candidatus Pelagibacter sp. HTCC7211] gi|207083444|gb|EDZ60870.1| riboflavin biosynthesis protein RibD [Candidatus Pelagibacter sp. HTCC7211] Length = 353 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 17/102 (16%) Query: 8 MSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL+ A+ N L P VG + V ++KIIS + + HAE+ AI+ Sbjct: 1 MDLALDLARSNEGLTGTNPSVGCIIVKHDKIISIG----QTSYNGRPHAEVNAIKN---- 52 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYG 101 S E L + +YVTLEPC+ C ++I ++++ + Y Sbjct: 53 -SIENLNDATMYVTLEPCSHHGVTPPCTSSIIKSKLKEVIYS 93 >gi|221502412|gb|EEE28139.1| cytidine and deoxycytidylate deaminase zinc-binding region, putative [Toxoplasma gondii VEG] Length = 692 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 23/38 (60%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 +Y + EPC +CA A+ +RI+ L++ N GGI G Sbjct: 625 VYCSHEPCVLCAMALIHSRIKLLFFVHDNKVHGGITRG 662 >gi|221482209|gb|EEE20570.1| cytidine and deoxycytidylate deaminase zinc-binding region domain-containing protein, putative [Toxoplasma gondii GT1] Length = 692 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 23/38 (60%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 +Y + EPC +CA A+ +RI+ L++ N GGI G Sbjct: 625 VYCSHEPCVLCAMALIHSRIKLLFFVHDNKVHGGITRG 662 >gi|269961115|ref|ZP_06175483.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269834066|gb|EEZ88157.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 159 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 17/108 (15%) Query: 7 FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM ALE ++NA A + PVG V V + +I+S + HAE+ A++ Sbjct: 23 FMLRALEVSRNALPACQPNPPVGCVLVKDGEIVSEGHTQAIG----GNHAEVEALKAYNG 78 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK 106 LS +V YVTLEPC+ CA + I+++ +P Sbjct: 79 DLS-----DVTAYVTLEPCSFVGRTPACAKTLVTCGIKKVVVAMLDPD 121 >gi|134299939|ref|YP_001113435.1| riboflavin biosynthesis protein RibD [Desulfotomaculum reducens MI-1] gi|134052639|gb|ABO50610.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Desulfotomaculum reducens MI-1] Length = 376 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 25/150 (16%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI-RMG 62 +M+ ALE A A R P VGAV V + +++ + K AHAE++A+ G Sbjct: 7 YMNMALELAAKARGRTS-PNPMVGAVLVKDGEVV----GKGFHAKAGGAHAEVVALADAG 61 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 R + YVTLEPC C A+ A ++R+ ++P G Sbjct: 62 DRAKGATV------YVTLEPCCHHGKTGPCTEALKKAGVKRVVAAMTDPNPLVAGKGLNI 115 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ G+ E+ ++++ + F K Sbjct: 116 LKDAGI----EVVSGLLEEEAKELNEVFIK 141 >gi|227537349|ref|ZP_03967398.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase [Sphingobacterium spiritivorum ATCC 33300] gi|227242852|gb|EEI92867.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase [Sphingobacterium spiritivorum ATCC 33300] Length = 350 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 45/103 (43%), Gaps = 25/103 (24%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ------EILPEVDLYVT 79 VGAV V NKII HAE+ AI+ ++ Q +L E D+YV+ Sbjct: 28 VGAVIVHENKIIGEGYTSPYG----GPHAEVNAIQ---QVKDQYPDSADRLLAESDMYVS 80 Query: 80 LEPCTM------CAAAISLARIRRLYYGASNP------KGGGI 110 LEPC CA I +R++Y +P KG GI Sbjct: 81 LEPCAHFGKTPPCANLIVKHNLRKVYIACMDPFAQVNGKGLGI 123 >gi|71892014|ref|YP_277744.1| pyrimidine deaminase/reductase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796120|gb|AAZ40871.1| pyrimidine deaminase/reductase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 379 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 19/108 (17%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 F++ AL+ A +P VG V V NNKII ++ AHAEI A+R Sbjct: 12 FLTRALQLAWKGRF-TTMPNPNVGCVIVRNNKIIGEG----YHIRAGEAHAEIHALR--- 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 ++ + Y+TLEPC+ C A+ A I+R+ +P Sbjct: 64 --IAGNLAQGATAYITLEPCSHYGRTPPCTTALINAGIKRVVVAMLDP 109 >gi|255003850|ref|ZP_05278651.1| riboflavin biosynthesis protein (ribD) [Anaplasma marginale str. Virginia] Length = 360 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 18/149 (12%) Query: 7 FMSCALEEAQNAALRNEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FMS AL A L N P V V+ N S G R HAE++A++ Sbjct: 7 FMSIALRLAHRG-LGNTYPNPTVGCVVTNSAGSIVG-RGWTAMGGRPHAEVVALKQ---- 60 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + E +YVTLEPC C AA+ A +RR+ A +P G + Sbjct: 61 -AGEAAAGSTVYVTLEPCCHHGQTGPCTAALISAGVRRVVIAALDPDKRVSGKGAR---- 115 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + E+ G+ +Q++ ++ FF + Sbjct: 116 SLADSGVEVKLGVLQQQAEELNVGFFYSK 144 >gi|308161963|gb|EFO64392.1| Hypothetical protein GLP15_944 [Giardia lamblia P15] Length = 306 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS-PEIYPGIS 133 D++ EPC C+ + AR++R++Y GG+ +L +H P + G S Sbjct: 229 DVFALEEPCIFCSMCLLHARVKRVFYSTFMRHNGGLNETLMVPSLPGVNHRFPVVKFGWS 288 Query: 134 E 134 E Sbjct: 289 E 289 >gi|329929844|ref|ZP_08283520.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. HGF5] gi|328935822|gb|EGG32283.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. HGF5] Length = 366 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GCR 64 +MS AL+ A+ A + I PV V+ + ++ G L+ T HAE+ A+ M G + Sbjct: 9 YMSLALDLAERAQGQTGINPVVGCVVVKDGALAGVGTH---LERGTPHAEVHALNMAGPK 65 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + YVTLEPC+ C+ + +RR+ +P G Q Sbjct: 66 AAGSTV------YVTLEPCSHYGATPPCSERLIAKGVRRVVVACEDPNPLVAGRGIQMLR 119 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ GI + R+ ++ + F K Sbjct: 120 AAGI----EVETGILKDRALRLNEAFVK 143 >gi|315125800|ref|YP_004067803.1| riboflavin biosynthesis protein [Pseudoalteromonas sp. SM9913] gi|315014314|gb|ADT67652.1| riboflavin biosynthesis protein [Pseudoalteromonas sp. SM9913] Length = 375 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 23/129 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V NNKII +R HAE+ A+ M + E YVTLEPC+ Sbjct: 35 VGCVLVKNNKIIGEGFHRLAG----QGHAEVNALTM-----AGENAKGATAYVTLEPCSH 85 Query: 86 ------CAAAISLARIRRLYYGA--SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 CA + A ++++ SNP+ G G + A E+ G+ E ++ Sbjct: 86 YGRTPPCAEGLKAAGVKKVIAAMVDSNPQVAG--KGLKILADAGI----EVAYGLLEAQA 139 Query: 138 RQIIQDFFK 146 R + FFK Sbjct: 140 RALNFGFFK 148 >gi|56416383|ref|YP_153457.1| riboflavin biosynthesis protein [Anaplasma marginale str. St. Maries] gi|222474753|ref|YP_002563168.1| riboflavin biosynthesis protein (ribD) [Anaplasma marginale str. Florida] gi|254994610|ref|ZP_05276800.1| riboflavin biosynthesis protein (ribD) [Anaplasma marginale str. Mississippi] gi|56387615|gb|AAV86202.1| riboflavin biosynthesis protein [Anaplasma marginale str. St. Maries] gi|222418889|gb|ACM48912.1| riboflavin biosynthesis protein (ribD) [Anaplasma marginale str. Florida] Length = 371 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 18/149 (12%) Query: 7 FMSCALEEAQNAALRNEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FMS AL A L N P V V+ N S G R HAE++A++ Sbjct: 7 FMSIALRLAHRG-LGNTYPNPTVGCVVTNSAGSIVG-RGWTAMGGRPHAEVVALKQ---- 60 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + E +YVTLEPC C AA+ A +RR+ A +P G + +L Sbjct: 61 -AGEAAAGSTVYVTLEPCCHHGQTGPCTAALISAGVRRVVIAALDPDKRVSGKGAR--SL 117 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148 A E+ G+ +Q++ ++ FF + Sbjct: 118 ADS--GVEVKLGVLQQQAEELNVGFFYSK 144 >gi|46199115|ref|YP_004782.1| trk system potassium uptake protein trkG [Thermus thermophilus HB27] gi|55981142|ref|YP_144439.1| Trk system potassium uptake protein TrkG [Thermus thermophilus HB8] gi|46196739|gb|AAS81155.1| trk system potassium uptake protein trkG [Thermus thermophilus HB27] gi|55772555|dbj|BAD70996.1| Trk system potassium uptake protein (TrkG) [Thermus thermophilus HB8] Length = 490 Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 34/68 (50%) Query: 45 RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 RE+ +L +R+G R+LS+E+L +V +++ L A++LA + + + A Sbjct: 371 REITRTLHPQAVLPLRLGGRVLSEEVLRQVSVFILLYTLLFVLGAVALAFLEKDFVVAFT 430 Query: 105 PKGGGIEN 112 I N Sbjct: 431 ASAQAIGN 438 >gi|326388321|ref|ZP_08209917.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Novosphingobium nitrogenifigens DSM 19370] gi|326207053|gb|EGD57874.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Novosphingobium nitrogenifigens DSM 19370] Length = 321 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 24/92 (26%) Query: 26 VGAVAVLNNKII----SRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 VGAV V N+++ +RAG R HAE A+ M + + LYVTLE Sbjct: 28 VGAVLVRENRVVGRGFTRAGGRP--------HAEAEALAM-----AGDATRGATLYVTLE 74 Query: 82 PCT-------MCAAAISLARIRRLYYGASNPK 106 PC CA + AR R+ G ++P Sbjct: 75 PCAHVSPRGPACADLVVAARPARVVVGCTDPD 106 >gi|330799923|ref|XP_003287990.1| hypothetical protein DICPUDRAFT_78829 [Dictyostelium purpureum] gi|325082014|gb|EGC35511.1| hypothetical protein DICPUDRAFT_78829 [Dictyostelium purpureum] Length = 234 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Query: 53 HAEILAIR-----MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 HAEI AI M R + Q LYVT EPC MC +A+ ++ + +G Sbjct: 97 HAEINAILNCTDIMAARGIKQSSWEGYYLYVTGEPCPMCTSALIWSKFDAVIFGT 151 >gi|218660442|ref|ZP_03516372.1| nucleoside triphosphate pyrophosphohydrolase [Rhizobium etli IE4771] Length = 465 Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 28/57 (49%) Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 N EL++ H E+ ++ + + ++ T EPCTMC +AI+ A YY Sbjct: 71 NNELENPLWHGEVHTLKRFYELGDKPATKDLIFLSTHEPCTMCMSAITWAGFDNFYY 127 >gi|294657495|ref|XP_459803.2| DEHA2E11374p [Debaryomyces hansenii CBS767] gi|199432736|emb|CAG88042.2| DEHA2E11374p [Debaryomyces hansenii] Length = 582 Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 12/108 (11%) Query: 7 FMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M ALE A + + VGAV V N +++ A +REL T HAE A+ Sbjct: 436 YMELALEMANKCGETQTQFNVGAVLVNNGEVL--ATGHSRELPGNT-HAEQCALEKYFEQ 492 Query: 66 LSQEILPE-VDLYVTLEPCTM-------CAAAISLARIRRLYYGASNP 105 + +P ++Y T+EPC++ C I I+ + G P Sbjct: 493 TGKREVPAGTEIYTTMEPCSLRLSGNLPCVDRILETNIKTCFVGVVEP 540 >gi|295658617|ref|XP_002789869.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226283013|gb|EEH38579.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 499 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 +DLY+T EPC CA + L+R R + Y P G G Sbjct: 410 LDLYITHEPCVCCAMGMLLSRFRAVVY--LQPAGEG 443 >gi|330903778|gb|EGH34350.1| cytosine deaminase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 40 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 21/39 (53%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR 43 + FM A +EAQ IP+G+V V KII R NR Sbjct: 2 DAFMQAAFDEAQLGLKEGGIPIGSVIVHGGKIIGRGHNR 40 >gi|222099734|ref|YP_002534302.1| Riboflavin biosynthesis protein RibD [Thermotoga neapolitana DSM 4359] gi|221572124|gb|ACM22936.1| Riboflavin biosynthesis protein RibD [Thermotoga neapolitana DSM 4359] Length = 348 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 49/117 (41%), Gaps = 17/117 (14%) Query: 7 FMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+E A+ R PVGAV V +IIS + HAE +AI R Sbjct: 5 FMKRAIELAKKGLGRVNPNPPVGAVVVKEGRIISEGFHPYFG----GPHAERVAIESAKR 60 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP---KGGGIEN 112 E L L VTLEPC C I + I+++ G +P G G+E Sbjct: 61 --KGEDLTGTTLVVTLEPCDHHGKTPPCTDLIIESGIKKVVIGMRDPNPVSGSGVEK 115 >gi|218246081|ref|YP_002371452.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8801] gi|218166559|gb|ACK65296.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8801] Length = 360 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 27/130 (20%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V N +I+ + K HAEI A+R +QE +YV+LEPC Sbjct: 31 VGSVIVQNGEIVGEGFHP----KAGEPHAEIFALRQ-----AQERAKGATVYVSLEPCNH 81 Query: 86 ------CAAAISLARIRRLYYGASNP----KGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 C A+ A + ++ G +P G G+E + E+ G+ E Sbjct: 82 YGRTPPCTDALIAAGVSKVVVGMVDPNPLVSGKGVEKLQE--------SGIEVVVGVEES 133 Query: 136 RSRQIIQDFF 145 RQ+ + F Sbjct: 134 ACRQLNEAFI 143 >gi|238755138|ref|ZP_04616485.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia ruckeri ATCC 29473] gi|238706698|gb|EEP99068.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia ruckeri ATCC 29473] Length = 369 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 19/114 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M ++M+ A E A+ P VG V V + KI+ L+ HAE+ Sbjct: 1 MHPDEIYMARAFELARLGRFTTS-PNPNVGCVIVRDGKIV----GEGYHLRAGEPHAEVH 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 A+RM + + YVTLEPC+ CA A+ A IRR+ +P Sbjct: 56 ALRM-----AGDAARGATAYVTLEPCSHHGRTPPCADALVAAGIRRVVTAMQDP 104 >gi|258515514|ref|YP_003191736.1| riboflavin biosynthesis protein RibD [Desulfotomaculum acetoxidans DSM 771] gi|257779219|gb|ACV63113.1| riboflavin biosynthesis protein RibD [Desulfotomaculum acetoxidans DSM 771] Length = 367 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 19/108 (17%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL+ A A R P VG+V V N ++ R ++ K T HAEI A++ Sbjct: 5 YMKMALDLAARARGRTS-PNPMVGSVIVKNGAVVGRGYHK----KAGTPHAEIHALKE-- 57 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + E +YVTLEPC C AI A I+R ++P Sbjct: 58 ---AGEAARGATIYVTLEPCCHHGRTGPCTEAILSAGIKRAVVAMTDP 102 >gi|78188601|ref|YP_378939.1| riboflavin biosynthesis protein RibD [Chlorobium chlorochromatii CaD3] gi|78170800|gb|ABB27896.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Chlorobium chlorochromatii CaD3] Length = 366 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 17/108 (15%) Query: 7 FMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ALE A A R N + VGA+ V +II + + AHAE+ AI Sbjct: 9 YMQRALELALRGAGRVSPNPM-VGALLVQEGEIIGEGWHE----RYGEAHAEVNAI---A 60 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + ++ L E LYVTLEPC+ C+ I +I R+ G +P Sbjct: 61 AVTNEAWLREATLYVTLEPCSHFGKTPPCSDLIIAKQIPRVVVGCRDP 108 >gi|332977386|gb|EGK14164.1| riboflavin biosynthesis protein RibD [Desmospora sp. 8437] Length = 368 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 62/152 (40%), Gaps = 23/152 (15%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL A+ AA P VGAV V + +++ + LK T HAE+ A+ Sbjct: 11 WMELALRLAE-AARGQTSPNPLVGAVVVKDGQLLGSGAH----LKAGTPHAEVHALEQAG 65 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + L YVTLEPC C + +RR+ G+++P G Q Sbjct: 66 KSAKGSTL-----YVTLEPCNHYGRTPPCTERTISSGVRRVVVGSTDPDPLVSGKGVQRL 120 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ R ++ + +F RR Sbjct: 121 REAGL----SVKTGVLADRCTRLNEAYFHHRR 148 >gi|237843195|ref|XP_002370895.1| Cytidine and deoxycytidylate deaminase zinc-binding domain-containing protein [Toxoplasma gondii ME49] gi|211968559|gb|EEB03755.1| Cytidine and deoxycytidylate deaminase zinc-binding domain-containing protein [Toxoplasma gondii ME49] Length = 178 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 15/38 (39%), Positives = 23/38 (60%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 +Y + EPC +CA A+ +RI+ L++ N GGI G Sbjct: 111 VYCSHEPCVLCAMALIHSRIKLLFFVHDNNVHGGITRG 148 >gi|153833299|ref|ZP_01985966.1| riboflavin biosynthesis protein RibD [Vibrio harveyi HY01] gi|148870435|gb|EDL69356.1| riboflavin biosynthesis protein RibD [Vibrio harveyi HY01] Length = 159 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 17/108 (15%) Query: 7 FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM ALE ++NA A + PVG V V + +I+S + HAE+ A++ Sbjct: 23 FMLRALEVSRNALPACQPNPPVGCVLVKDGEIVSEGHTQAIG----GNHAEVEALKAYNG 78 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK 106 LS +V YVTLEPC+ CA + I+++ +P Sbjct: 79 DLS-----DVTAYVTLEPCSFVGRTPACAKTLVTCGIKKVVVAMLDPD 121 >gi|89092520|ref|ZP_01165473.1| putative cytosine deaminase [Oceanospirillum sp. MED92] gi|89083032|gb|EAR62251.1| putative cytosine deaminase [Oceanospirillum sp. MED92] Length = 188 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 9/59 (15%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134 L V+LEPC MC A I A I R+ Y + GG L+ C P+ + +S+ Sbjct: 101 LLVSLEPCPMCTARILAAGIGRVIYLVEDQLGG---------MLSHCDRLPDAWVNLSQ 150 >gi|260914242|ref|ZP_05920715.1| riboflavin biosynthesis protein RibD [Pasteurella dagmatis ATCC 43325] gi|260631875|gb|EEX50053.1| riboflavin biosynthesis protein RibD [Pasteurella dagmatis ATCC 43325] Length = 377 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 59/152 (38%), Gaps = 21/152 (13%) Query: 6 VFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 VFM AL+ AQ VG V V + I+ + + K HAE++A+R Sbjct: 10 VFMQMALDLAQQGQFTTTPNPSVGCVLVKDGSIVGKGFH----FKAGEPHAEVMALRD-- 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + E YVTLEPC+ CA + A + R+ +P G Q Sbjct: 64 ---AGEQAKGATAYVTLEPCSHFGRTPPCAKGLIEAGVARVVSAMRDPNPQVAGKGLQML 120 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 E G+ E+++ + + F K R Sbjct: 121 ----AEQGIESAVGLLEEKAEWLNRGFLKRMR 148 >gi|126662522|ref|ZP_01733521.1| putative deoxycytidylate deaminase [Flavobacteria bacterium BAL38] gi|126625901|gb|EAZ96590.1| putative deoxycytidylate deaminase [Flavobacteria bacterium BAL38] Length = 142 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 14/111 (12%) Query: 13 EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE------------LKDVTAHAEILAIR 60 +E N + VGA+ V N IIS N K HAE AI Sbjct: 18 KEWGNLSYCQRKKVGAIIVKNKMIISDGYNGTPSGFENCCEDDANITKWYVLHAEANAIL 77 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 R S + + LY+TL PC C+ I + I+R+ Y G++ Sbjct: 78 KVAR--STQSCEDATLYITLSPCKDCSKLIHQSGIKRVVYHQEYKDTSGVD 126 >gi|221135084|ref|ZP_03561387.1| riboflavin biosynthesis protein RibD [Glaciecola sp. HTCC2999] Length = 381 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 15/91 (16%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-----EILPEVDLYVTL 80 VG V L+ +II ++ TAHAE+ A+ +++Q L E YVTL Sbjct: 33 VGCVITLDGEIIGEGHHQQAG----TAHAEVNALWQVNELIAQGKLVATQLKEATAYVTL 88 Query: 81 EPCTM------CAAAISLARIRRLYYGASNP 105 EPC+ CA A+ A I R+ +P Sbjct: 89 EPCSHTGRTGPCADALIDAYIGRVVIAMQDP 119 >gi|46109124|ref|XP_381620.1| hypothetical protein FG01444.1 [Gibberella zeae PH-1] Length = 428 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 13/39 (33%), Positives = 23/39 (58%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++LYVT EPC C+ I +R+ + + P+ GG+ + Sbjct: 345 LELYVTHEPCVSCSMGILHSRMGKAVFATHMPRSGGLSS 383 >gi|257059130|ref|YP_003137018.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8802] gi|256589296|gb|ACV00183.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8802] Length = 360 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 27/130 (20%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V N +I+ + K HAEI A+R +QE +YV+LEPC Sbjct: 31 VGSVIVQNGEIVGEGFHP----KAGEPHAEIFALRQ-----AQERAKGATVYVSLEPCNH 81 Query: 86 ------CAAAISLARIRRLYYGASNP----KGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 C A+ A + ++ G +P G G+E + E+ G+ E Sbjct: 82 YGRTPPCTDALIAAGVSKVVVGMVDPNPLVSGKGVEKLQE--------SGIEVVVGVEES 133 Query: 136 RSRQIIQDFF 145 RQ+ + F Sbjct: 134 ACRQLNEAFI 143 >gi|294101414|ref|YP_003553272.1| CMP/dCMP deaminase zinc-binding protein [Aminobacterium colombiense DSM 12261] gi|293616394|gb|ADE56548.1| CMP/dCMP deaminase zinc-binding protein [Aminobacterium colombiense DSM 12261] Length = 168 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 10/120 (8%) Query: 29 VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88 V L +K+ +G R+ + +HAEI AI + ++ LY T EPC+ C Sbjct: 58 VGCLRDKLGIPSGERHEICRG--SHAEINAIAQAAAVGTRT--EGAVLYCTHEPCSFCTK 113 Query: 89 AISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 AI A IRR+ + P E +Q +L C S +++ Q ++ F ++R Sbjct: 114 AIINAGIRRIVFVYPYPDALASEMRSQ-ASLEVCQLSEKVF-----QEMDLALKAFLQQR 167 >gi|289621391|emb|CBI52174.1| unnamed protein product [Sordaria macrospora] Length = 157 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGAS---NPKGGGIEN 112 +Y TL PC MC AI L +I R+ G + P+ GG E+ Sbjct: 56 IYTTLSPCDMCTGAILLYKIPRVVIGENRTFKPENGGGED 95 >gi|190572874|ref|YP_001970719.1| putative nucleotide deaminase [Stenotrophomonas maltophilia K279a] gi|254523836|ref|ZP_05135891.1| CMP/dCMP deaminase, zinc-binding protein [Stenotrophomonas sp. SKA14] gi|190010796|emb|CAQ44405.1| putative nucleotide deaminase [Stenotrophomonas maltophilia K279a] gi|219721427|gb|EED39952.1| CMP/dCMP deaminase, zinc-binding protein [Stenotrophomonas sp. SKA14] Length = 186 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 5/85 (5%) Query: 25 PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS----QEILPEVDLYVT 79 P GAV ++K+I+ NR AHAE +A + + L +L V L + Sbjct: 49 PFGAVVFGPDDKVIAAGVNRVMPHATSLAHAENMAYMLAQQRLQTPRLNAVLSPVTLATS 108 Query: 80 LEPCTMCAAAISLARIRRLYYGASN 104 +PC C A A I RL GA++ Sbjct: 109 SQPCCQCYGATVWAGIDRLLIGANS 133 >gi|305665639|ref|YP_003861926.1| deoxycytidylate deaminase [Maribacter sp. HTCC2170] gi|88710395|gb|EAR02627.1| deoxycytidylate deaminase [Maribacter sp. HTCC2170] Length = 147 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 14/98 (14%) Query: 26 VGAVAVLNNKIISRAGN----------RNRE--LKDVTAHAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N + E K HAE AI S + Sbjct: 31 VGAIVVKDRMIISDGYNGTPTGFENVCEDEEGYTKWYVLHAEANAISKVAS--STQSCEG 88 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 LY+TL PC C+ I + I+R+ Y + G G+E Sbjct: 89 ATLYITLSPCRECSKLIHQSGIKRVVYKKAYKDGSGLE 126 >gi|323144123|ref|ZP_08078762.1| riboflavin biosynthesis protein RibD [Succinatimonas hippei YIT 12066] gi|322416100|gb|EFY06795.1| riboflavin biosynthesis protein RibD [Succinatimonas hippei YIT 12066] Length = 366 Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 19/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V N II + K HAEI+A+R ++ YVTLEPC+ Sbjct: 21 VGCVIVRNGMIIGEGYHH----KAGEPHAEIMAMRSAGSSVAG-----ATCYVTLEPCSH 71 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA A+ A ++R+ +P G + A E+ G+ E ++ + Sbjct: 72 YGRTPPCAKALVKAGVKRVVIACGDPNPQVAGRGVKILKDAGI----EVDVGLYENKALK 127 Query: 140 IIQDFFK 146 + + FFK Sbjct: 128 LNRAFFK 134 >gi|253998546|ref|YP_003050609.1| riboflavin biosynthesis protein RibD [Methylovorus sp. SIP3-4] gi|253985225|gb|ACT50082.1| riboflavin biosynthesis protein RibD [Methylovorus sp. SIP3-4] Length = 368 Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 15/86 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V + +I+ + LK HAE+ A+R + D YVTLEPC+ Sbjct: 30 VGCVIVKDGQIVGEGAH----LKAGEPHAEVHALRQAGNLAQ-----GADAYVTLEPCSH 80 Query: 86 ------CAAAISLARIRRLYYGASNP 105 CA A+ A ++R+ +P Sbjct: 81 HGRTPPCADALIKAGVKRVVAAMQDP 106 >gi|171463092|ref|YP_001797205.1| riboflavin biosynthesis protein RibD [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192630|gb|ACB43591.1| riboflavin biosynthesis protein RibD [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 372 Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 52/117 (44%), Gaps = 18/117 (15%) Query: 7 FMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FMS AL EAQ A L N P VG V KII R + AHAE+ A+ + Sbjct: 9 FMSEALSEAQKALYLSNPNPRVGCVIAKEGKIIGRGFTQAAG----KAHAEVQAL-ADAK 63 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111 + +YVTLEPC+ C A+ A+ ++ S+P G G+E Sbjct: 64 ARGNDATGST-IYVTLEPCSHTGKTPPCVDALIAAKPSKVIVAMSDPNPLVAGQGLE 119 >gi|162452084|ref|YP_001614451.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Sorangium cellulosum 'So ce 56'] gi|161162666|emb|CAN93971.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Sorangium cellulosum 'So ce 56'] Length = 381 Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 61/153 (39%), Gaps = 32/153 (20%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG---- 62 M A+EEA A PVGAV +++ AG E+ V HA R G Sbjct: 16 MMRLAIEEAHKAMPSPNPPVGAV------VLNAAG----EVVAVAHHA-----RAGEEHA 60 Query: 63 ---CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + + LYVTLEPC C A+ A I+R+ GA +P + G Sbjct: 61 EGLALAAAGDAARGGTLYVTLEPCNHEGRTPPCVDAVLSAGIKRVVVGAPDPNPSVVGGG 120 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q + A + G++ +R +I + K Sbjct: 121 AQRLSDAGL----AVDVGVAGAEARALIAPWTK 149 >gi|149237721|ref|XP_001524737.1| DRAP deaminase [Lodderomyces elongisporus NRRL YB-4239] gi|146451334|gb|EDK45590.1| DRAP deaminase [Lodderomyces elongisporus NRRL YB-4239] Length = 622 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 14/86 (16%) Query: 7 FMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---- 61 +M AL+EA+ + + VG V VL+ ++IS +REL+ T HAE A+ Sbjct: 458 YMEMALDEARKCGETQTQFNVGCVLVLDGEVISTG--HSRELEGNT-HAEQCALEKYFAK 514 Query: 62 --GCRILSQEILPEVDLYVTLEPCTM 85 G R ++ +LY T+EPC++ Sbjct: 515 NGGIR----DVPLGTELYTTMEPCSL 536 >gi|194016547|ref|ZP_03055161.1| riboflavin biosynthesis protein RibD [Bacillus pumilus ATCC 7061] gi|194012020|gb|EDW21588.1| riboflavin biosynthesis protein RibD [Bacillus pumilus ATCC 7061] Length = 356 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 21/108 (19%) Query: 8 MSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M+ +LE A+ A++ + VGAV V +N+I+ + +K HAEI A++M Sbjct: 1 MNLSLENAR--AMKGQTSPNPLVGAVIVRDNEIVGVGAH----MKAGEPHAEIHALKM-- 52 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + + +YVTLEPC+ CA A+ A + + A +P Sbjct: 53 ---AGDKAKGATIYVTLEPCSHHGRTGPCAEALVKAGVETVVVAALDP 97 >gi|261405997|ref|YP_003242238.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. Y412MC10] gi|261282460|gb|ACX64431.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. Y412MC10] Length = 369 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GCR 64 +MS AL+ A+ A + I PV V+ + ++ G L+ T HAE+ A+ M G + Sbjct: 12 YMSLALDLAERAQGQTGINPVVGCVVVKDGALAGVGTH---LERGTPHAEVHALNMAGPK 68 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + YVTLEPC+ C+ + +RR+ +P G Q Sbjct: 69 AAGSTV------YVTLEPCSHYGATPPCSERLIAEGVRRVVVACEDPNPLVAGRGIQMLR 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ GI + R+ ++ + F K Sbjct: 123 AAGI----EVETGILKDRALRLNEAFVK 146 >gi|168187451|ref|ZP_02622086.1| riboflavin biosynthesis protein RibD [Clostridium botulinum C str. Eklund] gi|169294672|gb|EDS76805.1| riboflavin biosynthesis protein RibD [Clostridium botulinum C str. Eklund] Length = 372 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 35/135 (25%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V +NKII + + + HAE+ A++ + E + +YVTLEPC+ Sbjct: 26 VGAVIVKDNKIIGQGYHE----RFGGLHAEVNALKN-----ATEDVTGATMYVTLEPCSH 76 Query: 86 ------CAAAISLARIRRLYYGASNPK----GGGI----ENGTQFYTLATCHHSPEIYPG 131 CA I + I+ + G +P G GI ENG + + G Sbjct: 77 YGKTPPCANTIVKSGIKEVIVGMRDPNELVAGRGINILKENGIK------------VTVG 124 Query: 132 ISEQRSRQIIQDFFK 146 I E+ ++I + F K Sbjct: 125 IFEEEIKKINEIFIK 139 >gi|320583405|gb|EFW97618.1| DRAP deaminase, putative [Pichia angusta DL-1] Length = 569 Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 13/84 (15%) Query: 7 FMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI-----R 60 +M+ ALE+A+ + + VGAV ++IS REL+ T HAE A+ + Sbjct: 421 YMALALEQAEKCPQIDSAFRVGAVITCGGEVISTG--HTRELEGNT-HAEQCAMEKYFEK 477 Query: 61 MGCRILSQEILPEVDLYVTLEPCT 84 G R L P ++Y T+EPC+ Sbjct: 478 TGSRTLP----PGCEIYTTMEPCS 497 >gi|298373394|ref|ZP_06983383.1| cytidine/deoxycytidylate deaminase family protein [Bacteroidetes oral taxon 274 str. F0058] gi|298274446|gb|EFI15998.1| cytidine/deoxycytidylate deaminase family protein [Bacteroidetes oral taxon 274 str. F0058] Length = 141 Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 38/98 (38%), Gaps = 14/98 (14%) Query: 26 VGAVAVLNNKIISRAGN------------RNRELKDVTAHAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N + K HAE AI R S Sbjct: 32 VGALLVKDKMIISDGYNGTPSGFENCCEDEHNNSKPYVLHAEANAISKVAR--SNNSSDG 89 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 LYVT PC CA I A IRR+ YG G+E Sbjct: 90 ATLYVTASPCMECAKLIIQAGIRRVVYGEEYRIADGLE 127 >gi|308801951|ref|XP_003078289.1| Scamp4 protein (ISS) [Ostreococcus tauri] gi|116056740|emb|CAL53029.1| Scamp4 protein (ISS) [Ostreococcus tauri] Length = 363 Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust. Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%) Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 D+++ EPC MCA A+ +R++R+ + A + G + NG Sbjct: 302 DVFLAREPCVMCAMALVHSRLKRVIFAAPDDVNGAL-NG 339 >gi|15618780|ref|NP_225066.1| riboflavin deaminase [Chlamydophila pneumoniae CWL029] gi|15836404|ref|NP_300928.1| riboflavin deaminase [Chlamydophila pneumoniae J138] gi|16752168|ref|NP_445535.1| riboflavin-specific deaminase [Chlamydophila pneumoniae AR39] gi|33242231|ref|NP_877172.1| riboflavin-specific deaminase [Chlamydophila pneumoniae TW-183] gi|6225949|sp|Q9Z735|RIBD_CHLPN RecName: Full=Riboflavin biosynthesis protein RibD; Includes: RecName: Full=Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase; Includes: RecName: Full=5-amino-6-(5-phosphoribosylamino)uracil reductase; AltName: Full=HTP reductase gi|4377188|gb|AAD19009.1| Riboflavin Deaminase [Chlamydophila pneumoniae CWL029] gi|7189911|gb|AAF38776.1| riboflavin-specific deaminase [Chlamydophila pneumoniae AR39] gi|8979245|dbj|BAA99079.1| riboflavin deaminase [Chlamydophila pneumoniae J138] gi|33236742|gb|AAP98829.1| riboflavin-specific deaminase [Chlamydophila pneumoniae TW-183] Length = 376 Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 19/129 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V N+II + HAE LAI+ +S D+YV+LEPC+ Sbjct: 32 VGCVVVQENRIIGEGFHAYAG----GPHAEELAIQNASMPISGS-----DVYVSLEPCSH 82 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA + ++ R++ +P G A ++Y GI E ++ Sbjct: 83 FGSCPPCANLLIKHKVSRVFVALVDPDPKVAGQGIAMLRQAGI----QVYVGIGESEAQA 138 Query: 140 IIQDFFKER 148 +Q + +R Sbjct: 139 SLQPYLYQR 147 >gi|298373665|ref|ZP_06983654.1| riboflavin biosynthesis protein RibD [Bacteroidetes oral taxon 274 str. F0058] gi|298274717|gb|EFI16269.1| riboflavin biosynthesis protein RibD [Bacteroidetes oral taxon 274 str. F0058] Length = 349 Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 7/59 (11%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 VGAV V + KII +R + AHAE+ A+ +L++++L LYV LEPC+ Sbjct: 28 VGAVIVRDGKIIGEGYHR----RYGEAHAEVNAVN---SVLNKDLLRRSTLYVNLEPCS 79 >gi|261880389|ref|ZP_06006816.1| cytidine/deoxycytidylate deaminase [Prevotella bergensis DSM 17361] gi|270332934|gb|EFA43720.1| cytidine/deoxycytidylate deaminase [Prevotella bergensis DSM 17361] Length = 156 Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 37/97 (38%), Gaps = 14/97 (14%) Query: 26 VGAVAVLNNKIISRAGN------------RNRELKDVTAHAEILAIRMGCRILSQEILPE 73 VGA+ V N IIS N N K HAE AI R S Sbjct: 35 VGALVVKNKMIISDGYNGTPSGFENVCEDDNDLTKPYVLHAEANAITKLAR--SHNNSEG 92 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 LYVT PC CA I A I+R+ YG GI Sbjct: 93 ATLYVTASPCIECAKLIIQAGIKRVVYGEKYRLDDGI 129 >gi|15805190|ref|NP_293877.1| riboflavin-specific deaminase [Deinococcus radiodurans R1] gi|6457821|gb|AAF09742.1|AE001878_1 riboflavin-specific deaminase [Deinococcus radiodurans R1] Length = 357 Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 7/80 (8%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL EA R PVG V V + +I S R K HAE+ A+R Sbjct: 11 YMQLALNEAAKGLGRTSPNPPVGCVIVRDGEIASEIVGRGFHPKAGEPHAEVFALRE--- 67 Query: 65 ILSQEILPEVDLYVTLEPCT 84 + E YVTLEPC+ Sbjct: 68 --AGERARGATAYVTLEPCS 85 >gi|328956808|ref|YP_004374194.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Carnobacterium sp. 17-4] gi|328673132|gb|AEB29178.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Carnobacterium sp. 17-4] Length = 355 Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 35/135 (25%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V ++I + ++ K HAE+ AI + +++ + LYVTLEPC+ Sbjct: 19 VGAVIVKGGRVIGQGYHQ----KYGQPHAEVNAI-----VSAKKDVTGATLYVTLEPCSH 69 Query: 86 ------CAAAISLARIRRLYYGASNPK----GGGIE----NGTQFYTLATCHHSPEIYPG 131 C+ + I+R+ G +P G GIE NG + T G Sbjct: 70 FGKTPPCSDLLIDKNIKRVVVGTLDPNPLVAGKGIERLRSNGIEVVT------------G 117 Query: 132 ISEQRSRQIIQDFFK 146 + E+ S+++ + F K Sbjct: 118 VLEEESQKLNEIFIK 132 >gi|304383732|ref|ZP_07366191.1| riboflavin biosynthesis protein RibD [Prevotella marshii DSM 16973] gi|304335256|gb|EFM01527.1| riboflavin biosynthesis protein RibD [Prevotella marshii DSM 16973] Length = 315 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 5/58 (8%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 VGAV V+ N+II ++ AHAE+ A C +LP LYV+LEPC Sbjct: 31 VGAVIVVENRIIGEG----YHVRYGEAHAEVNAFASICP-KDAALLPSATLYVSLEPC 83 >gi|218668008|ref|YP_002424804.1| riboflavin biosynthesis protein RibD [Acidithiobacillus ferrooxidans ATCC 23270] gi|218520221|gb|ACK80807.1| riboflavin biosynthesis protein RibD [Acidithiobacillus ferrooxidans ATCC 23270] Length = 366 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 23/118 (19%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FMS AL A+ L + P VGAV V + ++I R + L+ HAE+LA++ Sbjct: 9 FMSEALVLAEQG-LYSAHPNPCVGAVLVKDGRVIGRGAH----LQAGEPHAEVLALKEAG 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111 YVTLEPC+ CA A+ A I R+ +P G G+E Sbjct: 64 AAARGATA-----YVTLEPCSHYGRTPPCADALIAAGIARVVIAMRDPNPLVAGRGVE 116 >gi|91788744|ref|YP_549696.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine deaminase [Polaromonas sp. JS666] gi|91697969|gb|ABE44798.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Polaromonas sp. JS666] Length = 373 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 12/151 (7%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK F+ ALE A++A R+E V+ + R AHAEI+A+R Sbjct: 1 MKPPPPFIDQALELARHAVGRSEPNPRVGCVIASADDQRVLGTGDTQAVGGAHAEIMALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 + ++ YVTLEPC+ C A+ A I+++ ++P + +G Sbjct: 61 DAA--ARRHVVAGATAYVTLEPCSHHGRTGPCCDALIAAGIKKVVASIADPN--PLVSGQ 116 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 F + + PG +E SR++ FF Sbjct: 117 GFERMRAAGIEVVVGPGAAE--SRELNIGFF 145 >gi|320586926|gb|EFW99589.1| cytosine deaminase [Grosmannia clavigera kw1407] Length = 170 Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 9/110 (8%) Query: 8 MSCALEEAQNAALRNEIP-------VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 + AL+EA+ +P +GA V + ++ + N+ +L H E + Sbjct: 8 LQIALDEAKAGFAEGGVPPRLTMAQIGAALVSADGTLMGKGRNQRVQLGSPIHHGETSTL 67 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 R LS +Y TL PC MC A L I+R+ G + GG Sbjct: 68 YNTGR-LSASAYKGSTMYTTLSPCDMCTGACILYGIKRVVIGENRTFLGG 116 >gi|297621124|ref|YP_003709261.1| putative CMP/dCMP deaminase [Waddlia chondrophila WSU 86-1044] gi|297376425|gb|ADI38255.1| putative CMP/dCMP deaminase [Waddlia chondrophila WSU 86-1044] Length = 165 Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 35 KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 +II+ A NR E +V AH EI + L++ +Y T E C MCAAA L Sbjct: 40 EIIAEARNRINE-HNVLAHPEIELAQWAANHLTRNKRKLTTMYTTGEHCPMCAAAHGLVG 98 Query: 95 IRRLYYGASN 104 + ++ Y +S+ Sbjct: 99 LGKIVYISSS 108 >gi|313207146|ref|YP_004046323.1| riboflavin biosynthesis protein ribd [Riemerella anatipestifer DSM 15868] gi|312446462|gb|ADQ82817.1| riboflavin biosynthesis protein RibD [Riemerella anatipestifer DSM 15868] gi|315022456|gb|EFT35483.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Riemerella anatipestifer RA-YM] gi|325335416|gb|ADZ11690.1| Pyrimidine deaminase [Riemerella anatipestifer RA-GD] Length = 339 Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 21/128 (16%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V N II + K HAEI AI + ++ +L E +YV+LEPC+ Sbjct: 27 VGAVIVHNGIIIGEGYHH----KAGEPHAEINAIN---SVENKGLLKESTIYVSLEPCSH 79 Query: 86 ------CAAAISLARIRRLYYGA--SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 CA I+ +++ G+ SN K G G A E+ + E+R Sbjct: 80 FGRTPPCATKITEIGFKKVVIGSADSNEKVSG--KGKAMIEEAGI----EVVDKVLEERC 133 Query: 138 RQIIQDFF 145 R + + FF Sbjct: 134 RWLNRRFF 141 >gi|150024567|ref|YP_001295393.1| dCMP deaminase [Flavobacterium psychrophilum JIP02/86] gi|149771108|emb|CAL42575.1| dCMP deaminase [Flavobacterium psychrophilum JIP02/86] Length = 142 Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 14/102 (13%) Query: 22 NEIPVGAVAVLNNKIISRAGN------------RNRELKDVTAHAEILAIRMGCRILSQE 69 N VGA+ V + IIS N ++ K HAE AI R S + Sbjct: 27 NRKQVGAIIVRDKMIISDGYNGSPSGFENCCEEQDGTTKWYILHAEANAILKVAR--STQ 84 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 LY+TL PC C+ I + I+R+ Y G+E Sbjct: 85 SCEGATLYITLSPCKECSKLIHQSGIKRVVYLEDYKDNSGLE 126 >gi|319955752|ref|YP_004167019.1| riboflavin biosynthesis protein ribd [Cellulophaga algicola DSM 14237] gi|319424412|gb|ADV51521.1| riboflavin biosynthesis protein RibD [Cellulophaga algicola DSM 14237] Length = 351 Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 19/131 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V NKII HAE+ AI + + +L +YVTLEPC+ Sbjct: 28 VGAVIVHENKIIGEGYTSPYG----GPHAEVNAINA---VADKNLLVNATIYVTLEPCSH 80 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I +I+ + G +P G Q A C + G+ E R+ Sbjct: 81 HGKTPPCADLIIKHKIKNVVVGLLDPHEKVAGQGIQKLKDAGC----TVTVGVLENECRE 136 Query: 140 IIQDF--FKER 148 + F F+E+ Sbjct: 137 HHKRFLTFQEK 147 >gi|116748817|ref|YP_845504.1| riboflavin biosynthesis protein RibD [Syntrophobacter fumaroxidans MPOB] gi|116697881|gb|ABK17069.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Syntrophobacter fumaroxidans MPOB] Length = 363 Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 15/101 (14%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK 106 HAE+ A+R + + LYVTLEPC C A+ + + + G +P Sbjct: 44 HAEVNALRQ-----AGDKARGATLYVTLEPCNHQGRTPPCTRAVLDSGVATVVIGMEDPN 98 Query: 107 GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G G F H ++ GI E+ R + Q F K Sbjct: 99 PGVRGGGASFLR----SHGLRVHAGILEKECRALNQPFIKH 135 >gi|327400004|ref|YP_004340843.1| CMP/dCMP deaminase zinc-binding protein [Archaeoglobus veneficus SNP6] gi|327315512|gb|AEA46128.1| CMP/dCMP deaminase zinc-binding protein [Archaeoglobus veneficus SNP6] Length = 159 Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 21/36 (58%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 LY T +PC MCA I A I+++ YG G G+E Sbjct: 102 LYTTHQPCIMCAKMIINAGIKKVVYGRRYADGRGLE 137 >gi|94265528|ref|ZP_01289276.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase-like [delta proteobacterium MLMS-1] gi|93453969|gb|EAT04315.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase-like [delta proteobacterium MLMS-1] Length = 374 Score = 34.3 bits (77), Expect = 6.1, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 19/108 (17%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL EA+ + P VGAV V N +++ + +R K HAE A+R Sbjct: 8 YMRLALAEARKGVGKTA-PNPCVGAVVVKNGRVVGKGWHR----KIGQPHAEAEALRA-- 60 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + E +YVTLEPC C+ AI A IRR+ YG ++P Sbjct: 61 ---AGEAAAGATIYVTLEPCNHHGRTPPCSEAIIAAGIRRVVYGLADP 105 >gi|314055285|ref|YP_004063623.1| putative CMP/dCMP deaminase zinc-binding [Ostreococcus tauri virus 2] gi|313575176|emb|CBI70189.1| putative CMP/dCMP deaminase zinc-binding [Ostreococcus tauri virus 2] Length = 136 Score = 34.3 bits (77), Expect = 6.1, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 24/107 (22%) Query: 12 LEEAQNAALR---NEIPVGAVAVLNNKIISRA-------GNRNRELKD----VTAHAEIL 57 ++ A+ A++R + + VG V V NN++IS N ++D T HAEI Sbjct: 12 MKTAELASVRSPCDRLNVGCVLVKNNRLISMGYNGFLGGSNHTSIVRDGHEQATIHAEIN 71 Query: 58 AI----RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 A+ + G I E+ Y+T PC C A++ + +++++Y Sbjct: 72 AVTDAAKRGVSIDGTEV------YITHYPCLNCYKALASSGVKKIHY 112 >gi|163789730|ref|ZP_02184167.1| Riboflavin biosynthesis protein RIBD (pirimidine deaminase and pirimidine reductase) [Carnobacterium sp. AT7] gi|159874952|gb|EDP69019.1| Riboflavin biosynthesis protein RIBD (pirimidine deaminase and pirimidine reductase) [Carnobacterium sp. AT7] Length = 351 Score = 34.3 bits (77), Expect = 6.1, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 35/135 (25%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGA+ V ++I + ++ K HAE+ AI ++E + LYVTLEPC+ Sbjct: 15 VGAIIVKGGRVIGQGYHQ----KYGQPHAEVNAIAS-----AKEDVTGATLYVTLEPCSH 65 Query: 86 ------CAAAISLARIRRLYYGASNPK----GGGIE----NGTQFYTLATCHHSPEIYPG 131 C+ + I+R+ G +P G GIE NG + T G Sbjct: 66 FGKTPPCSDLLIDKNIKRVVVGTLDPNPLVAGKGIERLRSNGIEVVT------------G 113 Query: 132 ISEQRSRQIIQDFFK 146 + E+ S+++ + F K Sbjct: 114 VLEEESQKLNEIFIK 128 >gi|253576364|ref|ZP_04853694.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. oral taxon 786 str. D14] gi|251844257|gb|EES72275.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. oral taxon 786 str. D14] Length = 373 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 25/119 (21%) Query: 7 FMSCAL---EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-G 62 +M+ AL E AQ N + VGAV V + ++ LK T HAE+ A+ M G Sbjct: 9 YMALALDMAERAQGQTGTNPV-VGAVVVKDGALV----GLGTHLKRGTPHAEVHALNMAG 63 Query: 63 CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111 + + YVTLEPC+ CA + +++R+ +P G GIE Sbjct: 64 SQAEGSTV------YVTLEPCSHHGLTPPCAERLIHEKVQRVVVACEDPNPLVAGKGIE 116 >gi|113461193|ref|YP_719262.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Haemophilus somnus 129PT] gi|112823236|gb|ABI25325.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Haemophilus somnus 129PT] Length = 376 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 45/108 (41%), Gaps = 19/108 (17%) Query: 7 FMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-MGC 63 FM ALE A+ VG V V N +I+ R + K HAE++A+R G Sbjct: 12 FMQIALELAKKGIFTTTPNPAVGCVLVKNGEIVGRGFH----FKAGQPHAEVMALRDAGD 67 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 R YVTLEPC+ CA + A IR + +P Sbjct: 68 RAKG------ATAYVTLEPCSHFGRTPPCAQGLIEAGIRNVIVAMKDP 109 >gi|19704838|ref|NP_602333.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296327621|ref|ZP_06870165.1| riboflavin biosynthesis protein RibD [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19712714|gb|AAL93632.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296155267|gb|EFG96040.1| riboflavin biosynthesis protein RibD [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 369 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 19/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V + KII ++ K HAE+ A+ + E +YVTLEPC+ Sbjct: 30 VGAVIVKDGKIIGEGWHK----KFGGPHAEVWALNE-----AGENAKGATVYVTLEPCSH 80 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I A I+R +P G + A E+ G+ E+ +++ Sbjct: 81 QGKTPPCAKRIIEAGIKRCVVACIDPNPLVAGKGMKIIENAGI----EVELGVLEKEAKE 136 Query: 140 IIQDFFK 146 I + FFK Sbjct: 137 INKIFFK 143 >gi|303228926|ref|ZP_07315736.1| riboflavin biosynthesis protein RibD [Veillonella atypica ACS-134-V-Col7a] gi|302516340|gb|EFL58272.1| riboflavin biosynthesis protein RibD [Veillonella atypica ACS-134-V-Col7a] Length = 406 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 15/101 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V NN I+ + K AHAE+ A+ + + LYVTLEPC Sbjct: 28 VGAVVVKNNTIVGEGYHH----KAGEAHAEVHALDA-----AGDNARGATLYVTLEPCAH 78 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CA + + I R+ G+++P G Q T A Sbjct: 79 YGKTPPCAKRVVESGIARVVIGSTDPNPLVAGKGIQILTEA 119 >gi|323344020|ref|ZP_08084246.1| cytidine/deoxycytidylate deaminase [Prevotella oralis ATCC 33269] gi|323094749|gb|EFZ37324.1| cytidine/deoxycytidylate deaminase [Prevotella oralis ATCC 33269] Length = 148 Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 35/88 (39%), Gaps = 14/88 (15%) Query: 26 VGAVAVLNNKIISRAGN------------RNRELKDVTAHAEILAIRMGCRILSQEILPE 73 VGA+ V N IIS N N K HAE AI R S Sbjct: 33 VGALVVKNKMIISDGYNGTPSGFENVCEDENSITKPYVLHAEANAITKLAR--SSNNSDG 90 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYG 101 LYVT PC CA I A I+R+ YG Sbjct: 91 STLYVTASPCIECAKLIIQAGIKRVVYG 118 >gi|325119282|emb|CBZ54836.1| putative cytidine and deoxycytidylate deaminase zinc-binding region domain-containing protein [Neospora caninum Liverpool] Length = 693 Score = 34.3 bits (77), Expect = 6.3, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 22/38 (57%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 +Y + EPC +CA A+ +RI+ L + N GGI G Sbjct: 626 VYCSHEPCVLCAMALIHSRIKLLVFAHDNKVHGGITRG 663 >gi|239613670|gb|EEQ90657.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3] Length = 464 Score = 34.3 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 18/27 (66%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 +DLY+T EPC CA + L+R R + Y Sbjct: 373 LDLYITHEPCVCCAMGMLLSRFRAVVY 399 >gi|213018626|ref|ZP_03334434.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995577|gb|EEB56217.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 399 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 31/121 (25%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRA----GNRNRELKDVTAHAEILAIR 60 MS AL+ A+ + L + P VG + V N +I G R HAE++A++ Sbjct: 1 MSIALKLAEKS-LGSVAPNPAVGCIIVKNGMVIGEGYTGIGGR--------PHAEVVALQ 51 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGI 110 ++++ +YVTLEPC C A I + I+R+ A +P GGGI Sbjct: 52 N-----AKDLTHSATMYVTLEPCCHFGVTEPCTAEIIKSGIKRVVIAAIDPDSRVSGGGI 106 Query: 111 E 111 + Sbjct: 107 K 107 >gi|261193096|ref|XP_002622954.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081] gi|239589089|gb|EEQ71732.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081] Length = 459 Score = 34.3 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 18/27 (66%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 +DLY+T EPC CA + L+R R + Y Sbjct: 368 LDLYITHEPCVCCAMGMLLSRFRAVVY 394 >gi|312131512|ref|YP_003998852.1| riboflavin biosynthesis protein ribd [Leadbetterella byssophila DSM 17132] gi|311908058|gb|ADQ18499.1| riboflavin biosynthesis protein RibD [Leadbetterella byssophila DSM 17132] Length = 322 Score = 34.3 bits (77), Expect = 6.6, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 7/58 (12%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 VG V V N+KII +R K HAE+ A+ + + +L E +YVTLEPC Sbjct: 24 VGCVIVHNDKIIGEGFHR----KYGQPHAEVNAVD---SVEDKSLLSESTVYVTLEPC 74 >gi|269302657|gb|ACZ32757.1| riboflavin biosynthesis protein RibD [Chlamydophila pneumoniae LPCoLN] Length = 376 Score = 34.3 bits (77), Expect = 6.6, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 19/129 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V N+II + HAE LAI+ +S D+YV+LEPC+ Sbjct: 32 VGCVVVQENRIIGEGFHAYAG----GPHAEELAIQNASMPISGS-----DVYVSLEPCSH 82 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA + ++ R++ +P G A ++Y GI E ++ Sbjct: 83 FGSRPPCANLLIKYKVSRVFVALVDPDPKVAGQGIAMLRQAGI----QVYVGIGESEAQA 138 Query: 140 IIQDFFKER 148 +Q + +R Sbjct: 139 SLQPYLYQR 147 >gi|327352571|gb|EGE81428.1| tRNA-specific adenosine-34 deaminase subunit Tad3 [Ajellomyces dermatitidis ATCC 18188] Length = 496 Score = 34.3 bits (77), Expect = 6.7, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 18/27 (66%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 +DLY+T EPC CA + L+R R + Y Sbjct: 405 LDLYITHEPCVCCAMGMLLSRFRAVVY 431 >gi|296118298|ref|ZP_06836879.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Corynebacterium ammoniagenes DSM 20306] gi|295968856|gb|EFG82100.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Corynebacterium ammoniagenes DSM 20306] Length = 183 Score = 34.3 bits (77), Expect = 6.7, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 2/100 (2%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCR 64 F+ +E A A + P G++ V + + +RNR D T H E R Sbjct: 29 AFLRRCVELAHEALEAGDEPFGSILVSADGDVLFE-DRNRVASGDNTQHPEFAIARWAAA 87 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 LS E Y + E C MCAAA + + R+ Y +S+ Sbjct: 88 NLSPEERAVATAYTSGEHCPMCAAAHAWVGLGRIVYASSS 127 >gi|310657724|ref|YP_003935445.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Clostridium sticklandii DSM 519] gi|308824502|emb|CBH20540.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Clostridium sticklandii] Length = 382 Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 52/121 (42%), Gaps = 21/121 (17%) Query: 7 FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL A+ N P VGAV V + K+I G K +HAEI AI Sbjct: 24 FMKLALSLAEKGRGYVNPNPLVGAVIVKDGKVIGE-GYHTAFGK---SHAEIEAINS--- 76 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIENGT 114 + E + +YVTLEPC C AI ++ R+ ++P G GIE Sbjct: 77 --ATEDIKSATMYVTLEPCCHQGKTPPCTEAIIKNQLARVVVATTDPNPLVSGSGIEKLK 134 Query: 115 Q 115 Q Sbjct: 135 Q 135 >gi|297838973|ref|XP_002887368.1| hypothetical protein ARALYDRAFT_894978 [Arabidopsis lyrata subsp. lyrata] gi|297333209|gb|EFH63627.1| hypothetical protein ARALYDRAFT_894978 [Arabidopsis lyrata subsp. lyrata] Length = 81 Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust. Identities = 13/24 (54%), Positives = 19/24 (79%) Query: 75 DLYVTLEPCTMCAAAISLARIRRL 98 D+++ LEPCTMCA A+ RI+R+ Sbjct: 50 DIFLMLEPCTMCAMALVHQRIKRI 73 >gi|302384784|ref|YP_003820606.1| dCMP deaminase [Clostridium saccharolyticum WM1] gi|302195412|gb|ADL02983.1| dCMP deaminase [Clostridium saccharolyticum WM1] Length = 164 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 16/32 (50%), Positives = 20/32 (62%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 LYVTL PC CA AI A I+ + YG+ +G Sbjct: 101 LYVTLFPCNECAKAIIQAGIKTIVYGSDKYEG 132 >gi|237742612|ref|ZP_04573093.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium sp. 4_1_13] gi|229430260|gb|EEO40472.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium sp. 4_1_13] Length = 369 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 19/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V + KII ++ K HAE+ A+ ++E +YVTLEPC+ Sbjct: 30 VGAVIVKDGKIIGEGWHK----KFGGPHAEVWALNE-----AEENAEGATIYVTLEPCSH 80 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I A I+R +P G + A + G+ E+ +++ Sbjct: 81 QGKTPPCAKRIVEAGIKRCVVACIDPNPLVAGKGIKIIENAGIT----VKLGVLEKEAKE 136 Query: 140 IIQDFFK 146 I + FFK Sbjct: 137 INKIFFK 143 >gi|312129766|ref|YP_003997106.1| cmp/dcmp deaminase zinc-binding protein [Leadbetterella byssophila DSM 17132] gi|311906312|gb|ADQ16753.1| CMP/dCMP deaminase zinc-binding protein [Leadbetterella byssophila DSM 17132] Length = 152 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 35/142 (24%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIPVGAVAVLNNKIIS------RAGNRN---------- 44 K ++FM A++ A+ + +R + VGAV V + +IIS AG N Sbjct: 5 KFDDIFMDLAIQLAKRSHCVRAQ--VGAVLVNDTRIISIGYNGPPAGTHNCDDEFGEQGC 62 Query: 45 -RELK---DVTAHAE----ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96 R+ K + HAE + A + G + LYVTL PC CA I +I+ Sbjct: 63 PRDSKGSCSLALHAEQNAILYATKNGANVEGST------LYVTLSPCIACARVIFSMKIK 116 Query: 97 RLYY--GASNPKGGGIENGTQF 116 +++Y + KG + G F Sbjct: 117 KVFYLNSYAEYKGLSSDEGVDF 138 >gi|297622519|ref|YP_003703953.1| riboflavin biosynthesis protein RibD [Truepera radiovictrix DSM 17093] gi|297163699|gb|ADI13410.1| riboflavin biosynthesis protein RibD [Truepera radiovictrix DSM 17093] Length = 393 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 53/118 (44%), Gaps = 34/118 (28%) Query: 7 FMSCALEEAQ---NAALRNEIPVGAVAVLNNKIIS-----RAGNRNRELKDVTAHAEILA 58 +MS ALE A+ + N + VG V V +++II RAG AHAE+ A Sbjct: 15 YMSRALELAERGRGSTAPNPM-VGCVIVRDDEIIGEGWHERAGE---------AHAEVRA 64 Query: 59 IR----MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK 106 ++ G R+ LYVTLEPC C AI A +RR+ A +P Sbjct: 65 LQDARSRGARVRG------ATLYVTLEPCNHTGRTPPCTEAILEAGVRRVVIAALDPD 116 >gi|258651398|ref|YP_003200554.1| CMP/dCMP deaminase zinc-binding [Nakamurella multipartita DSM 44233] gi|258554623|gb|ACV77565.1| CMP/dCMP deaminase zinc-binding [Nakamurella multipartita DSM 44233] Length = 164 Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust. Identities = 25/93 (26%), Positives = 37/93 (39%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71 +E A+ A + P G+V V + + + D T H E R LS Sbjct: 13 VELAEQALDSGDEPFGSVLVTGDGTVLAEDHNRVAGGDRTRHPEFELARWAAANLSPHER 72 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +Y + E C MCAAA + + R+ Y S Sbjct: 73 RAATVYTSGEHCPMCAAAHAWVGLGRIVYATST 105 >gi|316934111|ref|YP_004109093.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris DX-1] gi|315601825|gb|ADU44360.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris DX-1] Length = 389 Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 17/107 (15%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL + R VGAV V + I+ R ++ HAE+ A+R Sbjct: 30 FMQLALALGRRGQGRTGTNPAVGAVLVKDGVIVGRGWTQDGGRP----HAEVEALRR--- 82 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + E LYVTLEPC+ CA AI A I R+ +P Sbjct: 83 --AGEAARGATLYVTLEPCSHHGRSPPCADAIVAAGIARVVSAIEDP 127 >gi|238918989|ref|YP_002932503.1| riboflavin biosynthesis protein RibD, [Edwardsiella ictaluri 93-146] gi|238868557|gb|ACR68268.1| riboflavin biosynthesis protein RibD, putative [Edwardsiella ictaluri 93-146] Length = 373 Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 15/86 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V +++I+ + L+ HAE+LA+RM + E YVTLEPC+ Sbjct: 33 VGCVLVRDDRIVGEGFH----LRAGEPHAEVLALRM-----AGEQARGATAYVTLEPCSH 83 Query: 86 ------CAAAISLARIRRLYYGASNP 105 CA A+ A + R+ +P Sbjct: 84 HGRTPPCADALVAAGVSRVVAAMQDP 109 >gi|297154385|gb|ADI04097.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Streptomyces bingchenggensis BCW-1] Length = 158 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 25/93 (26%), Positives = 39/93 (41%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71 +E A A + P G+V V + + + + D T H E R L+ E Sbjct: 14 VELAAEALEAGDEPFGSVLVAADGAVLFEDHNHVAGGDHTRHPEFEIARWAAAHLTPEER 73 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +Y + E C MCAAA + R+ Y +S+ Sbjct: 74 AAATVYTSGEHCPMCAAAHGWVGLGRIVYASSS 106 >gi|167746303|ref|ZP_02418430.1| hypothetical protein ANACAC_01012 [Anaerostipes caccae DSM 14662] gi|167654296|gb|EDR98425.1| hypothetical protein ANACAC_01012 [Anaerostipes caccae DSM 14662] Length = 354 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 14/79 (17%) Query: 75 DLYVTLEPCTM------CAAAISLARIRRLYYG--ASNPKGGGIENGTQFYTLATCHHSP 126 +LYVTLEPC C A+ + IR++Y G NPK G+ G + H Sbjct: 61 ELYVTLEPCCHYGKTPPCTEAVIKSGIRKVYVGNVDPNPKVAGM--GIKILR----EHGI 114 Query: 127 EIYPGISEQRSRQIIQDFF 145 ++ GI ++ R++ FF Sbjct: 115 KVETGILDEECRELNDIFF 133 >gi|68171296|ref|ZP_00544696.1| Riboflavin biosynthesis protein RibD [Ehrlichia chaffeensis str. Sapulpa] gi|88658608|ref|YP_506994.1| riboflavin biosynthesis protein RibD [Ehrlichia chaffeensis str. Arkansas] gi|67999277|gb|EAM85926.1| Riboflavin biosynthesis protein RibD [Ehrlichia chaffeensis str. Sapulpa] gi|88600065|gb|ABD45534.1| riboflavin biosynthesis protein RibD [Ehrlichia chaffeensis str. Arkansas] Length = 360 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 31/122 (25%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRA----GNRNRELKDVTAHAEILAI 59 FMS AL A+ L N P VG + V + ++ R G R HAE++A+ Sbjct: 8 FMSLALRIARRG-LGNVFPNPAVGCIVVNHGMVVGRGYTQVGGR--------PHAEVIAL 58 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGG 109 + + YVTLEPC+ CA + A ++R+ A +P G G Sbjct: 59 NNAGHLAKGSTV-----YVTLEPCSHYGQTGPCALKLIDAGVKRMVIAAKDPDVRVSGNG 113 Query: 110 IE 111 IE Sbjct: 114 IE 115 >gi|311993486|ref|YP_004010351.1| Cd dCMP deaminase [Acinetobacter phage Acj9] gi|295917443|gb|ADG60114.1| Cd dCMP deaminase [Acinetobacter phage Acj9] Length = 181 Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + + +YVTL PC CA AI+ + IR+L Y Sbjct: 92 HAELNAILYAAK--NGLAIDGATMYVTLSPCADCAKAIANSGIRQLVY 137 >gi|281357052|ref|ZP_06243542.1| riboflavin biosynthesis protein RibD [Victivallis vadensis ATCC BAA-548] gi|281316610|gb|EFB00634.1| riboflavin biosynthesis protein RibD [Victivallis vadensis ATCC BAA-548] Length = 346 Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 52/131 (39%), Gaps = 24/131 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI----RMGCRILSQEILPEVDLYVTLE 81 VGAV V + +II R K HAEI A+ + G I YVTLE Sbjct: 32 VGAVIVRDGEII----GRGYHCKAGEPHAEINALIDVEKHGLDAKGATI------YVTLE 81 Query: 82 PCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 PC+ C AI A I R+ G+ +P G Q A ++ G+ Sbjct: 82 PCSTVGRTPACTDAIRAAGISRVVIGSLDPNPKHAGRGVQLLEEAGI----QVTVGVERA 137 Query: 136 RSRQIIQDFFK 146 +I + FFK Sbjct: 138 ACGEINRPFFK 148 >gi|168181552|ref|ZP_02616216.1| riboflavin biosynthesis protein RibD [Clostridium botulinum Bf] gi|237796324|ref|YP_002863876.1| riboflavin biosynthesis protein RibD [Clostridium botulinum Ba4 str. 657] gi|182674971|gb|EDT86932.1| riboflavin biosynthesis protein RibD [Clostridium botulinum Bf] gi|229264059|gb|ACQ55092.1| riboflavin biosynthesis protein RibD [Clostridium botulinum Ba4 str. 657] Length = 365 Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 29/158 (18%) Query: 1 MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ N +M L+ A+ + N P VGA+ V NNKII ++ HAE+ A Sbjct: 1 MEDYNFYMEKTLKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFG----GPHAEVYA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108 +R + E +YVTLEPC+ CA I I + +P +G Sbjct: 57 LRE-----AGEKAKGATIYVTLEPCSHYGKTPPCAEYIVKMGISKAIIAMKDPNPLVEGR 111 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 GI+ Q + E+ I E+ S+++ + F K Sbjct: 112 GIDILKQ--------NGIEVVTEIMEKESKKLNEVFIK 141 >gi|296133286|ref|YP_003640533.1| riboflavin biosynthesis protein RibD [Thermincola sp. JR] gi|296031864|gb|ADG82632.1| riboflavin biosynthesis protein RibD [Thermincola potens JR] Length = 385 Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 13/81 (16%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ALE A A N P VGAV V + ++I + +K T HAE+ A+R Sbjct: 8 YMRMALELAAKAR-GNTSPNPMVGAVIVKDGRVIGKG----YHMKAGTPHAEVHALRE-- 60 Query: 64 RILSQEILPEVDLYVTLEPCT 84 + E+ +YVTLEPC+ Sbjct: 61 ---AGELSRGATMYVTLEPCS 78 >gi|332829184|gb|EGK01848.1| hypothetical protein HMPREF9455_01996 [Dysgonomonas gadei ATCC BAA-286] Length = 147 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 39/97 (40%), Gaps = 16/97 (16%) Query: 26 VGAVAVLNNKIISRAGN------------RNRELKDVTAHAEILAI-RMGCRILSQEILP 72 VGA+ V + IIS N N E K HAE AI ++ C S Sbjct: 31 VGALIVKDKMIISDGYNGTPAGFENICEDENNETKPYVLHAEANAITKVAC---SHNSSM 87 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 +YVT PC CA I A I+R+ Y + G Sbjct: 88 GATMYVTTSPCIECAKLIIQAGIKRVVYNQKYRRSDG 124 >gi|120404037|ref|YP_953866.1| CMP/dCMP deaminase [Mycobacterium vanbaalenii PYR-1] gi|119956855|gb|ABM13860.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium vanbaalenii PYR-1] Length = 159 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 2/100 (2%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR-ELKDVTAHAEILAIRMGCR 64 VF+ + A+ A + P G++ V + + R + NR + D T H E R Sbjct: 9 VFLRRCVSLARTALDGGDEPFGSLLVDHEGSV-RFEDHNRVKDGDATRHPEFAIARWAVE 67 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 LS +Y + E C MCAAA + + R+ Y AS+ Sbjct: 68 HLSPAQRNRSTVYTSGEHCPMCAAAHAWVGLGRVVYAASS 107 >gi|94264512|ref|ZP_01288299.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase-like [delta proteobacterium MLMS-1] gi|93455071|gb|EAT05298.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase-like [delta proteobacterium MLMS-1] Length = 374 Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 19/108 (17%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL EA+ + P VGAV V N +++ + +R K HAE A+R Sbjct: 8 YMRLALAEARKGVGKTA-PNPCVGAVVVKNGRVVGKGWHR----KIGQPHAEAEALRA-- 60 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + E +YVTLEPC C+ AI A IRR+ YG ++P Sbjct: 61 ---AGEAAAGATIYVTLEPCNHLGRTPPCSEAIIAAGIRRVVYGLADP 105 >gi|310722262|ref|YP_003969086.1| dCMP deaminase [Aeromonas phage phiAS4] gi|306021105|gb|ADM79640.1| dCMP deaminase [Aeromonas phage phiAS4] Length = 172 Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA---SNPKG 107 HAE+ AI + + + + +++VT+ PC CA AI+ + I+R+ Y NP G Sbjct: 85 HAELNAILYAAK--TGQSIDGAEMHVTVSPCPDCAKAIAQSGIKRVVYNELYDRNPSG 140 >gi|189500554|ref|YP_001960024.1| riboflavin biosynthesis protein RibD [Chlorobium phaeobacteroides BS1] gi|189495995|gb|ACE04543.1| riboflavin biosynthesis protein RibD [Chlorobium phaeobacteroides BS1] Length = 371 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 19/148 (12%) Query: 7 FMSCALEEA-QNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +MS LE A + A + P VG++ VL+ +II + HAE+ AI Sbjct: 15 YMSRCLELAGKGAGYVSPNPMVGSLLVLDGQIIGEGYHERYG----GPHAEVNAI---AS 67 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + E L E LYV LEPC+ C+ I I R+ +P G Q Sbjct: 68 VKDSEQLRESTLYVNLEPCSHHGKTPPCSDLIIQKNIPRVVVACRDPHRMVAGRGIQKLL 127 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ G+ E+RS ++ + F K Sbjct: 128 DAGV----EVIEGVLEERSLKLNEAFMK 151 >gi|57640359|ref|YP_182837.1| riboflavin biosynthesis protein RibD [Thermococcus kodakarensis KOD1] gi|57158683|dbj|BAD84613.1| riboflavin biosynthesis protein RibD [Thermococcus kodakarensis KOD1] Length = 353 Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 51/118 (43%), Gaps = 18/118 (15%) Query: 7 FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM ALE A+ N P VGAV V + KII +R K HAEI AI + Sbjct: 8 FMRLALELAKRGEGWTNPNPMVGAVIVKDGKIIGVGWHR----KFGEKHAEINAIE-DAK 62 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIEN 112 ++ +YVTLEPC+ CA I +R+ +P G GIE Sbjct: 63 AKGYDVR-GATMYVTLEPCSHWGKQPPCADRIIQEGFKRVVVAMEDPNPLVAGQGIEK 119 >gi|302549165|ref|ZP_07301507.1| cytidine/deoxycytidylate deaminase [Streptomyces viridochromogenes DSM 40736] gi|302466783|gb|EFL29876.1| cytidine/deoxycytidylate deaminase [Streptomyces viridochromogenes DSM 40736] Length = 161 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 39/93 (41%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71 +E A A + P G+V V + + + D T H E R L+ E Sbjct: 15 VELAAEALDAGDEPFGSVLVGGDGTVLGEDHNRVASGDHTRHPEFELARWSASHLTPEER 74 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +Y + E C MCAAA + + R+ Y AS+ Sbjct: 75 AAATVYTSGEHCPMCAAAHAWVGLGRIVYVASS 107 >gi|58698891|ref|ZP_00373757.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of Drosophila ananassae] gi|58534587|gb|EAL58720.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of Drosophila ananassae] Length = 167 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 31/155 (20%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRA----GNRNRELKDVTAHAEILAI 59 FMS AL A+ L N P VG V V + I+S G R HAE++A+ Sbjct: 6 FMSIALRLAEKN-LGNVAPNPAVGCVIVKDGTIVSEGYTGIGGR--------PHAEVVAL 56 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 + +++ +Y+TLEPC C A I A I+R+ +P G Sbjct: 57 QN-----AKDSTHGATIYITLEPCCHHGVTGPCTAKIIKASIKRVVIATIDPDSRVSGRG 111 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + A E+ GI ++ ++++ FF + Sbjct: 112 MKALKEA----GIEVEQGIMQKEAKELNVGFFTTK 142 >gi|58699421|ref|ZP_00374173.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of Drosophila ananassae] gi|225630417|ref|YP_002727208.1| riboflavin biosynthesis protein RibD [Wolbachia sp. wRi] gi|58534061|gb|EAL58308.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of Drosophila ananassae] gi|225592398|gb|ACN95417.1| riboflavin biosynthesis protein RibD [Wolbachia sp. wRi] Length = 360 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 31/155 (20%) Query: 7 FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRA----GNRNRELKDVTAHAEILAI 59 FMS AL A+ L N P VG V V + I+S G R HAE++A+ Sbjct: 6 FMSIALRLAEKN-LGNVAPNPAVGCVIVKDGTIVSEGYTGIGGR--------PHAEVVAL 56 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 + +++ +Y+TLEPC C A I A I+R+ +P G Sbjct: 57 QN-----AKDSTHGATIYITLEPCCHHGVTGPCTAKIIKASIKRVVIATIDPDSRVSGRG 111 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + A E+ GI ++ ++++ FF + Sbjct: 112 MK----ALKEAGIEVEQGIMQKEAKELNVGFFTTK 142 >gi|289432876|ref|YP_003462749.1| riboflavin biosynthesis protein RibD [Dehalococcoides sp. GT] gi|288946596|gb|ADC74293.1| riboflavin biosynthesis protein RibD [Dehalococcoides sp. GT] Length = 365 Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 25/150 (16%) Query: 7 FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +MS AL A+ A + VGAV V N +++ + G D HAEI+A++ Sbjct: 3 YMSQALSLAKLAIGQVSPNPSVGAVIVKNGEVVGQ-GFTQPPGGD---HAEIVALKQ--- 55 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGA--SNPKGGGIENGTQF 116 + E LYVTLEPC C ++ + I+ +Y NP G G + Sbjct: 56 --AAEKAKGATLYVTLEPCCHQGRTPPCTGSVIASGIKEVYIATLDDNPLVSG--KGKKE 111 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A +++ G+ E+ +RQ+ + +FK Sbjct: 112 LEAAGI----KVHLGMMEREARQMNEAYFK 137 >gi|229819944|ref|YP_002881470.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333] gi|229565857|gb|ACQ79708.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333] Length = 163 Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 2/91 (2%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNR-ELKDVTAHAEILAIRMGCRILSQEILPE 73 A+ A + P G++ V + R +RNR + D T H E+ R LS E Sbjct: 20 AREALDDGDEPFGSLLVDATGAV-RFEDRNRVKGGDQTRHPELEIARWAAAHLSPEERAA 78 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +Y + E C MC+AA + + R+ Y AS+ Sbjct: 79 AVVYTSGEHCPMCSAAHAWVGLGRIVYAASS 109 >gi|194364457|ref|YP_002027067.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia R551-3] gi|194347261|gb|ACF50384.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia R551-3] Length = 186 Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Query: 25 PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS----QEILPEVDLYVT 79 P GAV +K+I+ NR AHAE +A + + L +L V L + Sbjct: 49 PFGAVVFGPEDKVIAAGVNRVMPHSTSLAHAENMAYMLAQQRLQTPRLNAVLSPVTLATS 108 Query: 80 LEPCTMCAAAISLARIRRLYYGASN 104 +PC C A A I RL GA++ Sbjct: 109 SQPCCQCYGATVWAGIDRLLIGANS 133 >gi|32491211|ref|NP_871465.1| hypothetical protein WGLp462 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166418|dbj|BAC24608.1| ribD [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 384 Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 19/130 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V VLN I+ ++ + HAEI A+++ + +YVTLEPC+ Sbjct: 30 VGCVIVLNKSIVGEGYHKIPG----SDHAEICALKLAGKYAKGS-----TVYVTLEPCSH 80 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA A+ A+++ + A +P + +G F L ++ I ++S + Sbjct: 81 HGKTPSCAQALINAKVKEVIASAVDP--NPLVSGKGFSMLKNA--GIKVKYNIMSEKSIK 136 Query: 140 IIQDFFKERR 149 + FFK + Sbjct: 137 LNLGFFKRMK 146 >gi|320102303|ref|YP_004177894.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Isosphaera pallida ATCC 43644] gi|319749585|gb|ADV61345.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Isosphaera pallida ATCC 43644] Length = 387 Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 27/151 (17%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 ++ AL E + VGA+ V +++ R +R + HAE+ A+R LS Sbjct: 3 LALALAERGRGHVEPNPMVGALIVRGGEVVGRGWHR----RFGGPHAEVEALRS----LS 54 Query: 68 QEILPE-VDLYVTLEPC------TMCAAAISLARIRRLYYGASNP----KGGGIENGTQF 116 L L+VTLEPC C AI A I R+ ++P GGG+ + Sbjct: 55 DPALARGATLFVTLEPCCHVGKTPPCTQAILEAGITRVVAAMADPFPKVAGGGL-AALRA 113 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + CH G+ E +R++ + K+ Sbjct: 114 AGVEVCH-------GLEETAARRLNAAYLKQ 137 >gi|258510212|ref|YP_003183646.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257476938|gb|ACV57257.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 151 Score = 33.9 bits (76), Expect = 8.6, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 27/99 (27%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV------- 74 + VG V V + +II+ N + H + + +GC+++ + + Sbjct: 28 TRLQVGCVVVRDKRIIASGYNG-------SIHGDEHCVDVGCKVVDGHCVRAIHAEQNAL 80 Query: 75 -------------DLYVTLEPCTMCAAAISLARIRRLYY 100 DLYVT PC C ++ A IRR++Y Sbjct: 81 LQCARFGIAAEGADLYVTHTPCLTCTKSLIQAGIRRVFY 119 >gi|195576792|ref|XP_002078257.1| GD22640 [Drosophila simulans] gi|194190266|gb|EDX03842.1| GD22640 [Drosophila simulans] Length = 500 Score = 33.9 bits (76), Expect = 8.6, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 5/82 (6%) Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFYT-LATCHHSP 126 +P +D +T E A SL R+ Y +P GG +E GT + + H+ P Sbjct: 345 MPYLDQTIT-ETLRKYPALSSLTRLASEDYEIPSPDGGDPVVLEKGTSVHIPVLAIHYDP 403 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 E+YP E R + D +ER Sbjct: 404 EVYPEPHEFRPERFAPDACRER 425 >gi|317052209|ref|YP_004113325.1| riboflavin biosynthesis protein RibD [Desulfurispirillum indicum S5] gi|316947293|gb|ADU66769.1| riboflavin biosynthesis protein RibD [Desulfurispirillum indicum S5] Length = 377 Score = 33.9 bits (76), Expect = 8.6, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 14/84 (16%) Query: 31 VLNNKIISRAG---NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM-- 85 V+ + I+ AG K AHAE++A++ + E LYVTLEPC + Sbjct: 30 VVGSVIVDAAGAIVGMGYHAKAGMAHAEVVALKD-----AGEKARGATLYVTLEPCCVQG 84 Query: 86 ----CAAAISLARIRRLYYGASNP 105 C AI A I+++ Y A +P Sbjct: 85 RTPPCTDAIIRAGIQKVVYAAQDP 108 >gi|109290173|ref|YP_656422.1| dCMP deaminase [Aeromonas phage 25] gi|104345846|gb|ABF72746.1| dCMP deaminase [Aeromonas phage 25] Length = 172 Score = 33.9 bits (76), Expect = 8.6, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA---SNPKG 107 HAE+ AI + + + + +++VT+ PC CA AI+ + I+R+ Y NP G Sbjct: 85 HAELNAILYAAK--TGQSIDGAEMHVTVSPCPDCAKAIAQSGIKRVVYNELYDRNPSG 140 >gi|86159164|ref|YP_465949.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Anaeromyxobacter dehalogenans 2CP-C] gi|85775675|gb|ABC82512.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Anaeromyxobacter dehalogenans 2CP-C] Length = 392 Score = 33.9 bits (76), Expect = 8.6, Method: Compositional matrix adjust. Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 6/37 (16%) Query: 75 DLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 D+Y TLEPC C+ A+ A +RR++ G+S+P Sbjct: 89 DVYTTLEPCDHFGKTPPCSVALLEAGVRRVFVGSSDP 125 >gi|319778563|ref|YP_004129476.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Taylorella equigenitalis MCE9] gi|317108587|gb|ADU91333.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Taylorella equigenitalis MCE9] Length = 379 Score = 33.9 bits (76), Expect = 8.7, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 14/95 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V N++II + + HAEI+A++ ++++ + LYVTLEPC+ Sbjct: 21 VGCVIVHNDEIIGEGATQIAG----SHHAEIMALKDARMRGHEDLIADAILYVTLEPCSH 76 Query: 86 ------CAAAISLARIRRLYYGASNPK----GGGI 110 C A+ I+ + + +P G GI Sbjct: 77 FGRTPPCTDALISNGIKHVVIASPDPNPIVGGNGI 111 >gi|33620697|ref|NP_891789.1| dCMP deaminase [Enterobacteria phage RB49] gi|33438567|gb|AAL15123.2| dCMP deaminase [Enterobacteria phage RB49] Length = 168 Score = 33.9 bits (76), Expect = 8.7, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 HAE+ AI R + + ++ T PC CA AI+ + I+ LYY + + GG Sbjct: 83 HAELNAILFAAR--NGVSIEGASMWCTASPCPDCAKAIANSGIKHLYYCDTYDRNGG 137 >gi|113969440|ref|YP_733233.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Shewanella sp. MR-4] gi|113884124|gb|ABI38176.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Shewanella sp. MR-4] Length = 381 Score = 33.9 bits (76), Expect = 8.7, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 19/115 (16%) Query: 5 NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 N MS A++ A+ R VG V V +N+I+ ++ K HAE+ A+RM Sbjct: 8 NQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQ----KAGEPHAEVHALRM- 62 Query: 63 CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGAS--NPKGGG 109 + E+ YVTLEPC+ CA A+ ++R+ NP+ GG Sbjct: 63 ----AGELARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGG 113 >gi|156977316|ref|YP_001448222.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio harveyi ATCC BAA-1116] gi|156528910|gb|ABU73995.1| hypothetical protein VIBHAR_06102 [Vibrio harveyi ATCC BAA-1116] Length = 201 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 17/107 (15%) Query: 7 FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM ALE + NA A + PVG V V + +I+S + HAE+ A++ Sbjct: 65 FMLRALEVSLNALPACQPNPPVGCVLVKDGEIVSEGHTQAIG----GNHAEVEALKA--- 117 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 + L +V YVTLEPC+ CA + I+++ +P Sbjct: 118 --YKGDLSDVTAYVTLEPCSFVGRTPACAKTLVTCGIKKVVVAMLDP 162 >gi|255732273|ref|XP_002551060.1| DRAP deaminase [Candida tropicalis MYA-3404] gi|240131346|gb|EER30906.1| DRAP deaminase [Candida tropicalis MYA-3404] Length = 590 Score = 33.5 bits (75), Expect = 9.0, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 7 FMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR--MGC 63 FM A+E+A+ + + VG V V N K+IS +REL T HAE A+ Sbjct: 439 FMEMAIEQAEKCGETQTQFNVGCVLVNNGKVISTG--HSRELPGNT-HAEQCALEKYFAE 495 Query: 64 RILSQEILPEVDLYVTLEPCTM 85 +E+ +++ T+EPC++ Sbjct: 496 HDGVKEVPEGTEIFTTMEPCSL 517 >gi|114046668|ref|YP_737218.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Shewanella sp. MR-7] gi|113888110|gb|ABI42161.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Shewanella sp. MR-7] Length = 381 Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 19/115 (16%) Query: 5 NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 N MS A++ A+ R VG V V +N+I+ ++ K HAE+ A+RM Sbjct: 8 NQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQ----KAGEPHAEVHALRM- 62 Query: 63 CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGAS--NPKGGG 109 + E+ YVTLEPC+ CA A+ ++R+ NP+ GG Sbjct: 63 ----AGELARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGG 113 >gi|197123236|ref|YP_002135187.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter sp. K] gi|196173085|gb|ACG74058.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter sp. K] Length = 392 Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust. Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 6/37 (16%) Query: 75 DLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 D+Y TLEPC C+ A+ A +RR++ G+S+P Sbjct: 89 DVYTTLEPCDHFGKTPPCSVALLEAGVRRVFVGSSDP 125 >gi|253996924|ref|YP_003048988.1| riboflavin biosynthesis protein RibD [Methylotenera mobilis JLW8] gi|253983603|gb|ACT48461.1| riboflavin biosynthesis protein RibD [Methylotenera mobilis JLW8] Length = 372 Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 15/86 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V + +I+ + + K HAE+ A+R + D+YVTLEPC+ Sbjct: 32 VGCVIVRDQQIVGQGAHH----KAGEPHAEVFALRQAGALAE-----GADVYVTLEPCSH 82 Query: 86 ------CAAAISLARIRRLYYGASNP 105 C A+ A+ +R+ +P Sbjct: 83 FGRTPPCVQAVIAAKPKRVVIAMQDP 108 >gi|304437387|ref|ZP_07397346.1| riboflavin biosynthesis protein RibD [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369643|gb|EFM23309.1| riboflavin biosynthesis protein RibD [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 367 Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 11/59 (18%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 HAEI A+RM + E+ LYVTLEPC CA A+ A I R+ +P Sbjct: 52 HAEIHALRM-----AGELARGATLYVTLEPCAHQGRTGPCAKAVIAAGITRVVVALRDP 105 >gi|297529535|ref|YP_003670810.1| riboflavin biosynthesis protein RibD [Geobacillus sp. C56-T3] gi|297252787|gb|ADI26233.1| riboflavin biosynthesis protein RibD [Geobacillus sp. C56-T3] Length = 380 Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 11/65 (16%) Query: 47 LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYY 100 LK HAE+ AIRM + E +YVTLEPC+ CA + A +RR+ Sbjct: 45 LKAGEPHAEVYAIRM-----AGEKARGATVYVTLEPCSHYGKTPPCADLLIQAGVRRVVV 99 Query: 101 GASNP 105 ++P Sbjct: 100 ATTDP 104 >gi|261417867|ref|YP_003251549.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y412MC61] gi|319767321|ref|YP_004132822.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y412MC52] gi|261374324|gb|ACX77067.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y412MC61] gi|317112187|gb|ADU94679.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y412MC52] Length = 380 Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 11/65 (16%) Query: 47 LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYY 100 LK HAE+ AIRM + E +YVTLEPC+ CA + A +RR+ Sbjct: 45 LKAGEPHAEVYAIRM-----AGEKARGATVYVTLEPCSHYGKTPPCADLLIQAGVRRVVV 99 Query: 101 GASNP 105 ++P Sbjct: 100 ATTDP 104 >gi|333030069|ref|ZP_08458130.1| CMP/dCMP deaminase zinc-binding [Bacteroides coprosuis DSM 18011] gi|332740666|gb|EGJ71148.1| CMP/dCMP deaminase zinc-binding [Bacteroides coprosuis DSM 18011] Length = 146 Score = 33.5 bits (75), Expect = 9.3, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 16/99 (16%) Query: 26 VGAVAVLNNKIISRAGN------------RNRELKDVTAHAEILAI-RMGCRILSQEILP 72 VGA+ V + IIS N N K HAE AI ++ C S Sbjct: 36 VGALIVKDKMIISDGYNGTPSGFENICEDDNNTTKPYVLHAEANAITKIAC---SNNSSD 92 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 +YVT PC CA I A I+R+ Y S GI+ Sbjct: 93 GATMYVTAAPCIECAKLIIQAGIKRVVYSESYRLDDGIQ 131 >gi|164687268|ref|ZP_02211296.1| hypothetical protein CLOBAR_00909 [Clostridium bartlettii DSM 16795] gi|164603692|gb|EDQ97157.1| hypothetical protein CLOBAR_00909 [Clostridium bartlettii DSM 16795] Length = 370 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%) Query: 2 KKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ N +M ALE A+ A+ VG + V + K+I +K HAE+ AI Sbjct: 8 QEDNYYMKKALELAKLGIGAVNPNPLVGCIIVKDGKVIGEG----YHMKFGEPHAEVNAI 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 ++E + +YVTLEPC+ CA + +++R+ ++P NG Sbjct: 64 NS-----AKEDIEGATVYVTLEPCSHFGKTPPCADNLVRHKVKRVVICNNDPNPLVAGNG 118 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A E+ GI E+ ++ + FF Sbjct: 119 IKKLQNAGI----EVTTGILEEEGLKLNEVFF 146 >gi|56420832|ref|YP_148150.1| riboflavin-specific deaminase [Geobacillus kaustophilus HTA426] gi|56380674|dbj|BAD76582.1| riboflavin-specific deaminase (diaminohydroxyphosphoribosylaminopyrimidine deaminase ; 5-amino-6-(5-phosphoribosylamino)uracil reductase ) [Geobacillus kaustophilus HTA426] Length = 380 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 11/65 (16%) Query: 47 LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYY 100 LK HAE+ AIRM + E +YVTLEPC+ CA + A +RR+ Sbjct: 45 LKAGEPHAEVYAIRM-----AGEKARGATVYVTLEPCSHYGKTPPCADLLIQAGVRRVVV 99 Query: 101 GASNP 105 ++P Sbjct: 100 ATTDP 104 >gi|288924860|ref|ZP_06418797.1| cytidine/deoxycytidylate deaminase family protein [Prevotella buccae D17] gi|315607887|ref|ZP_07882880.1| competence protein ComEB [Prevotella buccae ATCC 33574] gi|288338647|gb|EFC76996.1| cytidine/deoxycytidylate deaminase family protein [Prevotella buccae D17] gi|315250356|gb|EFU30352.1| competence protein ComEB [Prevotella buccae ATCC 33574] Length = 148 Score = 33.5 bits (75), Expect = 9.5, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 40/106 (37%), Gaps = 17/106 (16%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN------------RNRELKDVTAHAE 55 M+C E R VGA+ V + IIS N N K HAE Sbjct: 18 MACIWSENSYCERR---KVGALVVKDKMIISDGYNGTPSGFENVCEDENHITKPYVLHAE 74 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 AI R S LYVT PC CA I A I+R+ YG Sbjct: 75 ANAITKLAR--SSNNSDGSTLYVTASPCIECAKLIIQAGIKRVVYG 118 >gi|220918025|ref|YP_002493329.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter dehalogenans 2CP-1] gi|219955879|gb|ACL66263.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter dehalogenans 2CP-1] Length = 392 Score = 33.5 bits (75), Expect = 9.5, Method: Compositional matrix adjust. Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 6/37 (16%) Query: 75 DLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 D+Y TLEPC C+ A+ A +RR++ G+S+P Sbjct: 89 DVYTTLEPCDHFGKTPPCSVALLEAGVRRVFVGSSDP 125 >gi|116753576|ref|YP_842694.1| CMP/dCMP deaminase, zinc-binding [Methanosaeta thermophila PT] gi|116665027|gb|ABK14054.1| CMP/dCMP deaminase, zinc-binding protein [Methanosaeta thermophila PT] Length = 144 Score = 33.5 bits (75), Expect = 9.5, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 21/114 (18%) Query: 16 QNAALRNEIPVGAVAVLNNKIISR--------------AGNRNRELKDVTAHAEILAIRM 61 ++ LRN VGAV V + +I+S AG +++ T H A+ Sbjct: 20 RSTCLRNR--VGAVIVRDKRILSTGYNGAPTGLEHCDVAGCLREKVESGTRHELCRAVHA 77 Query: 62 GCRILSQEILPEVD-----LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 + Q L V LY T +PC +CA + ARIRR+ Y P G + Sbjct: 78 EQNAIIQAALHGVSIEGATLYCTHQPCILCAKMMINARIRRVVYRNQYPDEGAL 131 >gi|270308361|ref|YP_003330419.1| riboflavin biosynthesis protein, 5-amino-6-(5-phosphoribosylamino)uracil reductase, diaminohydroxyphosphoribosylaminopyrimidine deaminase [Dehalococcoides sp. VS] gi|270154253|gb|ACZ62091.1| riboflavin biosynthesis protein, 5-amino-6-(5-phosphoribosylamino)uracil reductase, diaminohydroxyphosphoribosylaminopyrimidine deaminase [Dehalococcoides sp. VS] Length = 365 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 41/158 (25%) Query: 7 FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +MS AL A+ A + VGAV V N +++ + G D HAEI+A++ Sbjct: 3 YMSQALSLAKLAIGQVSPNPSVGAVIVKNGEVVGQ-GFTQPPGGD---HAEIVALKQ--- 55 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP-KGGGIENGTQFYTLATCH 123 + E LYVTLEPC C + G + P G IE+G + +AT Sbjct: 56 --AAEKAKGAALYVTLEPC--C------------HQGRTPPCTGSIIESGIKEVYIATLD 99 Query: 124 HSP---------------EIYPGISEQRSRQIIQDFFK 146 +P +++ G+ E+ +RQ+ + +FK Sbjct: 100 DNPLVSGKGKKELENAGIKVHLGMMEREARQMNEAYFK 137 >gi|145346176|ref|XP_001417569.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577796|gb|ABO95862.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 147 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 23/103 (22%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK 106 HAE+ A+R + E+ YVTLEPC CA A+ A + R+ G +P Sbjct: 47 HAEVFALRA-----AGELARGATAYVTLEPCNHYGRTPPCARALVDAGVARVVVGFIDPD 101 Query: 107 ----GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 GGGI+ E+ G E R+I DF Sbjct: 102 PRVSGGGIQT--------LLDAGIEVAVGCEEALCREINADFI 136 >gi|57234067|ref|YP_181903.1| riboflavin biosynthesis protein RibD [Dehalococcoides ethenogenes 195] gi|57224515|gb|AAW39572.1| riboflavin biosynthesis protein RibD [Dehalococcoides ethenogenes 195] Length = 365 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 25/150 (16%) Query: 7 FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +MS AL A+ A + VGAV V N +++ + G D HAEI+A++ Sbjct: 3 YMSQALSLAKLAIGQVSPNPAVGAVIVKNGEVVGQ-GFTQPPGGD---HAEIVALKQ--- 55 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGA--SNPKGGGIENGTQF 116 + E LYVTLEPC C AI + I+ +Y NP G G + Sbjct: 56 --AAEKAKGAALYVTLEPCCHQGRTPPCTVAIIESGIKEVYIATLDDNPLVSG--KGKKE 111 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A +++ G+ E+ +RQ+ + +FK Sbjct: 112 LEDAGI----KVHLGMMEREARQMNEAYFK 137 >gi|197119395|ref|YP_002139822.1| bifunctional 2, 5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone deaminase/5-amino-6-(5'-phosphoribosylamino)uracil reductase [Geobacter bemidjiensis Bem] gi|197088755|gb|ACH40026.1| 2,5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone deaminase and 5-amino-6-(5'-phosphoribosylamino)uracil reductase [Geobacter bemidjiensis Bem] Length = 369 Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 21/148 (14%) Query: 7 FMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M AL EA+ + VG V V N +++ ++ K T HAE+ A++ Sbjct: 8 MMRLALAEARKGIGKTAPNPAVGCVIVRNGEVVGTGWHK----KAGTPHAEVHALKA--- 60 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + + D YVTLEPC+ CA A+ AR+ R++ +P + +G Sbjct: 61 --AGDKAAGADAYVTLEPCSHFGKTPPCAKALIEARVARVFVAMVDPN--PLVSGRGIQM 116 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146 L + E+ G+ ++ SR++ F K Sbjct: 117 LKDAGIAVEV--GLLKEESRELNLPFIK 142 >gi|225555471|gb|EEH03763.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 486 Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust. Identities = 13/27 (48%), Positives = 18/27 (66%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 +DLY+T EPC CA + L+R R + Y Sbjct: 404 LDLYITHEPCVCCAMGMLLSRFRAVVY 430 >gi|189502659|ref|YP_001958376.1| hypothetical protein Aasi_1340 [Candidatus Amoebophilus asiaticus 5a2] gi|189498100|gb|ACE06647.1| hypothetical protein Aasi_1340 [Candidatus Amoebophilus asiaticus 5a2] Length = 160 Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 25/134 (18%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIIS------RAGNRN-----------REL 47 ++F+ AL+ A+ + ++ VGAV + +IIS +G N R++ Sbjct: 8 DIFIQLALQLAKRSHCV-KLQVGAVLAKDTRIISIGYNGPPSGTYNCDEQWPGIGCPRDV 66 Query: 48 K---DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 K + HAE AI + +Q + LY+TL PC CA I I+R+ Y S Sbjct: 67 KGGCSLAIHAEQNAILYA--LSNQAAVTGATLYITLSPCLPCARIIFTVGIKRVVYVQSY 124 Query: 105 P--KGGGIENGTQF 116 KG E G +F Sbjct: 125 AAYKGLSKEEGLEF 138 >gi|328954436|ref|YP_004371770.1| CMP/dCMP deaminase zinc-binding protein [Desulfobacca acetoxidans DSM 11109] gi|328454760|gb|AEB10589.1| CMP/dCMP deaminase zinc-binding protein [Desulfobacca acetoxidans DSM 11109] Length = 186 Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust. Identities = 13/25 (52%), Positives = 19/25 (76%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYY 100 LYVTLEPC +C ++ A+I R+Y+ Sbjct: 105 LYVTLEPCYVCLKLLATAQIDRVYF 129 Searching..................................................done Results from round 2 >gi|314937113|ref|ZP_07844460.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus hominis subsp. hominis C80] gi|313655732|gb|EFS19477.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus hominis subsp. hominis C80] Length = 163 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M CA+EEA+ A E+P+GAV V +N+IISRA N L+ TAHAE LAI Sbjct: 1 MTNDEFYMKCAIEEAKKARQLGEVPIGAVIVKDNEIISRAHNLRETLQQPTAHAEHLAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +++ L + LYVTLEPC MCA + ++RI R+ YGA +PKGG + Sbjct: 61 RAAKVIGSWRLEDCTLYVTLEPCVMCAGTVVMSRIPRVVYGAMDPKGGCSGSLMDLLQQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ +++ FF++ R Sbjct: 121 QFNHRAIVEQGVLEEECSNLLRQFFRDLR 149 >gi|251794142|ref|YP_003008873.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2] gi|247541768|gb|ACS98786.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2] Length = 156 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A+EEA+ A E+P+GA+ V N +++ R N D TAHAE++AIR Sbjct: 5 QEDQAWMQLAIEEAKKAEQIGEVPIGAILVKNGEVVGRGYNLRETNHDPTAHAEMVAIRE 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C L L + LYVTLEPC MCA AI +R++R+ YG +PK G Sbjct: 65 ACERLGAWRLLDCTLYVTLEPCPMCAGAIVQSRVKRVVYGTGDPKAGCAGTLMNLLQEPR 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + +++ +FF+ R Sbjct: 125 FNHETELTSGVLQAECAELLTNFFRNLR 152 >gi|212637865|ref|YP_002314385.1| cytosine/adenosine deaminase [Anoxybacillus flavithermus WK1] gi|212559345|gb|ACJ32400.1| Cytosine/adenosine deaminase [Anoxybacillus flavithermus WK1] Length = 177 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 87/149 (58%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK +M A+EEA+ A E+P+GAV V N+++I+RA N + AHAE+LAI Sbjct: 16 MKNDEYYMHLAIEEAKKAEKIGEVPIGAVIVYNDQVIARAHNLRERDQRSIAHAELLAID 75 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + LYVTLEPC MCA AI L+RI+R+ +GAS+PKGG Sbjct: 76 EACKKLGTWRLEQATLYVTLEPCAMCAGAIVLSRIKRVVFGASDPKGGCAGTLMNLLQEP 135 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI ++ ++ +FF++ R Sbjct: 136 RFNHQVEVVSGILGEQCGNMLSEFFRQLR 164 >gi|223983492|ref|ZP_03633678.1| hypothetical protein HOLDEFILI_00958 [Holdemania filiformis DSM 12042] gi|223964664|gb|EEF68990.1| hypothetical protein HOLDEFILI_00958 [Holdemania filiformis DSM 12042] Length = 181 Score = 236 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 86/148 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM A++EA+ A +E+P+GAV V + KI++R N + + AHAEI+AI Sbjct: 8 KNDEYFMRQAIKEARKAEALDEVPIGAVLVHDGKILARGHNLREKKQSSLAHAEIVAIEK 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 CR L + LYVTLEPC MCA AI +RI ++ YGA++PKGG + Y + Sbjct: 68 ACRKTGSWRLEDCVLYVTLEPCPMCAGAILQSRIAKVVYGAADPKGGSVGTCFNLYDIPG 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ +++ FFK++R Sbjct: 128 FNHYPEVLGGVLSVDCAMLLKTFFKQKR 155 >gi|228475284|ref|ZP_04060009.1| tRNA-specific adenosine deaminase [Staphylococcus hominis SK119] gi|228270749|gb|EEK12158.1| tRNA-specific adenosine deaminase [Staphylococcus hominis SK119] Length = 162 Score = 236 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M CA+EEA+ A E+P+GAV V +N IISRA N L+ TAHAE LAI Sbjct: 1 MTNDEFYMKCAIEEAKKARQLGEVPIGAVIVKDNDIISRAHNLRETLQQPTAHAEHLAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +++ L + LYVTLEPC MCA + ++RI R+ YGA +PKGG + Sbjct: 61 RAAKVIGSWRLEDCTLYVTLEPCVMCAGTVVMSRIPRVVYGAMDPKGGCSGSLMDLLQQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ +++ FF++ R Sbjct: 121 QFNHHAIVEQGVLEEECSNLLRQFFRDLR 149 >gi|310639569|ref|YP_003944327.1| cmp/dcmp deaminase zinc-binding protein [Paenibacillus polymyxa SC2] gi|309244519|gb|ADO54086.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus polymyxa SC2] Length = 165 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 78/149 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A++EA A E+P+GAV V +N+II R N D TAHAE++AIR Sbjct: 3 IMDHAYWMREAIQEAYKAEALGEVPIGAVIVKDNEIIGRGYNLRETDTDPTAHAEMVAIR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L + LYVTLEPC MCA AI +R+ L YG ++PK G Sbjct: 63 QASEHLGAWRLLDCRLYVTLEPCPMCAGAIVQSRVPHLIYGTTDPKAGCAGTLMNLLQEP 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ ++ +FF++ R Sbjct: 123 RFNHCTEVTSGVLQEECASMLTNFFRQLR 151 >gi|226309631|ref|YP_002769525.1| tRNA specific adenosine deaminase [Brevibacillus brevis NBRC 100599] gi|226092579|dbj|BAH41021.1| putative tRNA specific adenosine deaminase [Brevibacillus brevis NBRC 100599] Length = 160 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + +M A+EEA+ AA E+P+GAV V + +I+ R N KD T HAE++AIR Sbjct: 5 NEHDYYMKQAMEEARKAAAIGEVPIGAVIVRDGEIVGRGYNLRETQKDPTLHAELIAIRE 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L LYVTLEPC MCA AI +RI ++ YGA +PK G Sbjct: 65 ASERLGGWRLIGCTLYVTLEPCPMCAGAIVQSRIEKVVYGARDPKAGCAGTLMNLLAEPR 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + Q++++FF+ R Sbjct: 125 FNHQVPVIEGVLAEECGQMLKEFFRGLR 152 >gi|242372784|ref|ZP_04818358.1| deaminase [Staphylococcus epidermidis M23864:W1] gi|242349557|gb|EES41158.1| deaminase [Staphylococcus epidermidis M23864:W1] Length = 168 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ N +M A++EA+ A E+P+GAV V +N +I+RA N L+ TAHAE +AI Sbjct: 1 MRTDNDYMRLAIKEARKAQELGEVPIGAVIVKDNHVIARAHNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L + LYVTLEPC MCA AI ++RI R+ YGA +PKGG + Sbjct: 61 RASEVIGSWRLEDCTLYVTLEPCVMCAGAIVMSRIPRVVYGAIDPKGGCTGSLMNLLAQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E ++++FFK R Sbjct: 121 QFNHRAIVESGILENECSTLLREFFKNIR 149 >gi|220932912|ref|YP_002509820.1| tRNA-adenosine deaminase [Halothermothrix orenii H 168] gi|219994222|gb|ACL70825.1| tRNA-adenosine deaminase [Halothermothrix orenii H 168] Length = 159 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 67/149 (44%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK FM ALEEA+ A E+P+GAV V N +I+ N D TAHAEI+AIR Sbjct: 1 MKTDEDFMELALEEARKALALEEVPIGAVVVCNGEIVGSGHNLKETENDPTAHAEIVAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R LS L E LYVT+EPC MCA AI AR++R+ YGA +PK G + Sbjct: 61 DAARKLSSWRLNECQLYVTIEPCPMCAGAIMQARLQRVVYGAVDPKAGVAGSLYNLLQDN 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ E+ G+ RQII+DFF E R Sbjct: 121 RFNHTVELKSGVLAAECRQIIKDFFSELR 149 >gi|70727433|ref|YP_254349.1| hypothetical protein SH2434 [Staphylococcus haemolyticus JCSC1435] gi|68448159|dbj|BAE05743.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 157 Score = 235 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 86/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+EEA+ A E+P+GA+ V NN++I+ A N + TAHAE +AI Sbjct: 1 MANDEYYMKLAIEEAKKAQKLGEVPIGAIIVKNNEVIASAHNLRETAQLPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L LYVTLEPC MCA AI ++RI ++ YGA++PKGG + + Sbjct: 61 RASKVLGSWRLEGCTLYVTLEPCVMCAGAIVMSRIPKVVYGATDPKGGCSGSLMNLLEES 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ EQ ++++FF+E R Sbjct: 121 QFNHRAEIVKGVLEQECGDLLRNFFRELR 149 >gi|302390668|ref|YP_003826489.1| tRNA-adenosine deaminase [Thermosediminibacter oceani DSM 16646] gi|302201296|gb|ADL08866.1| tRNA-adenosine deaminase [Thermosediminibacter oceani DSM 16646] Length = 152 Score = 235 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 87/148 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM AL+EA+ A ++E+PVGAV II+RA N +D TAHAE+LAI+ Sbjct: 4 KDHEFFMREALKEARKAFEQDEVPVGAVIAYEGSIIARAHNLRERSQDATAHAEVLAIKA 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C + L LYVTLEPC MCA AI LAR+ R+ +GA +PK G + + + Sbjct: 64 ACEAMGTWRLTGCSLYVTLEPCPMCAGAIILARLDRVVFGAPDPKAGAAGSVVDLFKVER 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ + +++DFF+++R Sbjct: 124 FNHHPEVVSGVLAEECGILLKDFFRQKR 151 >gi|224475714|ref|YP_002633320.1| putative deaminase [Staphylococcus carnosus subsp. carnosus TM300] gi|222420321|emb|CAL27135.1| putative deaminase [Staphylococcus carnosus subsp. carnosus TM300] Length = 159 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M ALEEA+ A E+P+GA+ V ++I+RA N ++ TAHAE +AI Sbjct: 1 MATDENYMKLALEEAKKAERIGEVPIGAIVVKEGEVIARAHNLRETVQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + LYVTLEPC MC+ AI ++RI R+ YGAS+PKGG + Sbjct: 61 KAAEAVGSWRLEDCTLYVTLEPCVMCSGAIVMSRIPRVVYGASDPKGGCSGSLMDLLQEP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E I++ FFK+ R Sbjct: 121 RFNHRAEVVSGVLENECGAILKSFFKQLR 149 >gi|78043781|ref|YP_361468.1| cytidine/deoxycytidylate deaminase family protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995896|gb|ABB14795.1| cytidine/deoxycytidylate deaminase family protein [Carboxydothermus hydrogenoformans Z-2901] Length = 153 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 62/147 (42%), Positives = 84/147 (57%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM+ AL+EA+ AAL+ E+PVGAV V N +II R N D TAHAEI+A++ Sbjct: 2 DHEKFMAEALKEAEKAALQGEVPVGAVVVYNGEIIGRGHNLRETFSDPTAHAEIVALKEA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L + LYVT+EPC MCA AI ARI+ L YGA + K G ++ Sbjct: 62 ASKLKNWQLKDCTLYVTVEPCPMCAGAIYQARIKTLVYGAPDLKAGAVDTLFDLVRNPRL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + +II DFF+E+R Sbjct: 122 NHRVEVISGVLAAEASKIITDFFREKR 148 >gi|309390267|gb|ADO78147.1| tRNA-adenosine deaminase [Halanaerobium praevalens DSM 2228] Length = 154 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 62/149 (41%), Positives = 89/149 (59%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ +M AL EA+ A R E+P+GAV V N++++ R N + +D T HAEI+A+R Sbjct: 1 MENDIKYMKMALAEARKAYQRAEVPIGAVVVCNDQVVGRGFNLREQTQDPTTHAEIIALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + LYVTLEPC MCA AI +RI+RL YGAS+PK G + + Q Sbjct: 61 EAASNKVSWRLEDCQLYVTLEPCPMCAGAILQSRIKRLVYGASDPKAGAVRSLYQLLDDN 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ GI E+ S Q+++DFF+E R Sbjct: 121 RFNHQVKVEAGIMEKESAQLLKDFFRELR 149 >gi|226328060|ref|ZP_03803578.1| hypothetical protein PROPEN_01951 [Proteus penneri ATCC 35198] gi|225203764|gb|EEG86118.1| hypothetical protein PROPEN_01951 [Proteus penneri ATCC 35198] Length = 176 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 61/148 (41%), Positives = 85/148 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +M A+E+A A EIPVGAV V++NKII++ N + D TAHAEI+A+R Sbjct: 5 KDDIYWMHKAIEQAHKAQEIGEIPVGAVLVVDNKIIAKGWNHSIIDNDPTAHAEIMALRK 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G + L L + LY+TLEPC MCA AI +R++R+ YGAS+ K G + Sbjct: 65 GGKHLQNYRLLDATLYITLEPCVMCAGAIVHSRVKRVVYGASDLKTGAAGSFIDILQHPG 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + Q++ FFK RR Sbjct: 125 MNHKVEITSGVLGEECSQLLSQFFKMRR 152 >gi|303243154|ref|ZP_07329591.1| CMP/dCMP deaminase zinc-binding [Acetivibrio cellulolyticus CD2] gi|302589304|gb|EFL59115.1| CMP/dCMP deaminase zinc-binding [Acetivibrio cellulolyticus CD2] Length = 154 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 64/149 (42%), Positives = 89/149 (59%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++G +FM AL+EA+ A ++E PVGAV V + IISR N D T HAEI AI+ Sbjct: 1 MEQGYLFMKEALKEAKKAYKKDETPVGAVIVKDGVIISRGHNEKEMKNDPTLHAEISAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L+ L + DLYVTLEPC MCA AI AR+ RL+ G +PK G + + + Sbjct: 61 KACKKLNTWRLNDCDLYVTLEPCAMCAGAIIQARVGRLFIGTPDPKAGAVGSVVDILGVE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E++ G+ + I++DFFKE R Sbjct: 121 KFNHKVEVFYGLLMEECSMILKDFFKELR 149 >gi|227356250|ref|ZP_03840639.1| tRNA-specific adenosine deaminase [Proteus mirabilis ATCC 29906] gi|227163714|gb|EEI48630.1| tRNA-specific adenosine deaminase [Proteus mirabilis ATCC 29906] Length = 176 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +K +M A+E+A A EIPVGAV V +NKII++ N + D TAHAEI+A+R Sbjct: 4 IKDDIYWMHKAIEQAHKAQQLGEIPVGAVLVADNKIIAKGWNHSIIDNDPTAHAEIMALR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 G + L L + LY+TLEPC MCA AI +R++R+ YGAS+ K G + Sbjct: 64 KGGKHLQNYRLLDATLYITLEPCVMCAGAIVHSRVKRVVYGASDLKTGAAGSFIDILQHP 123 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + Q++ FFK RR Sbjct: 124 GMNHKVEITSGVLGEECAQLLSQFFKMRR 152 >gi|317126762|ref|YP_004093044.1| CMP/dCMP deaminase zinc-binding protein [Bacillus cellulosilyticus DSM 2522] gi|315471710|gb|ADU28313.1| CMP/dCMP deaminase zinc-binding protein [Bacillus cellulosilyticus DSM 2522] Length = 161 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 87/148 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K+ FM AL EA+ A E+P+GA+ V +N II+R N + + VT HAE++AI+ Sbjct: 7 KEDIFFMEQALVEAEKAMEIGEVPIGAIIVRDNVIIARGHNLREQQQMVTNHAELIAIQK 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C + L + LYVTLEPC MCA AI +R++R+ YGA++PK G + Sbjct: 67 ACEEVGSWRLEDCTLYVTLEPCPMCAGAIVQSRMKRVVYGAADPKAGCCGSLMNLLDEPR 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ S ++++DFFK+ R Sbjct: 127 LNHQVYVTSGLYEEESSRLLKDFFKKLR 154 >gi|296123852|ref|YP_003631630.1| CMP/dCMP deaminase zinc-binding protein [Planctomyces limnophilus DSM 3776] gi|296016192|gb|ADG69431.1| CMP/dCMP deaminase zinc-binding protein [Planctomyces limnophilus DSM 3776] Length = 166 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 88/149 (59%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ + +M AL+ AQ A E+P+GAV V +++II A N+ +LKD TAHAEI+AI Sbjct: 13 LQPHDRWMRQALDLAQQAFAEEEVPIGAVIVKDDQIIGAAWNQREQLKDPTAHAEIVAIT 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L + LYVTLEPC MCA AI ARI R+ YG ++PK G Q A Sbjct: 73 QAAEVIGDWRLEDCTLYVTLEPCPMCAGAIVQARIPRVVYGITDPKAGACHTLYQITDDA 132 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ Q ++I+Q+FF+ +R Sbjct: 133 RLNHRCAVLGGVLAQECKEILQEFFRLQR 161 >gi|223043054|ref|ZP_03613102.1| tRNA-specific adenosine deaminase [Staphylococcus capitis SK14] gi|222443908|gb|EEE50005.1| tRNA-specific adenosine deaminase [Staphylococcus capitis SK14] Length = 168 Score = 233 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ +M A++EAQ A E+P+GAV V NN++I+ A N L+ TAHAE +AI Sbjct: 1 MRTDKDYMRLAIKEAQKAQALGEVPIGAVIVKNNQVIAHAHNLRESLQLPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +++ L E LYVTLEPC MCA AI ++RI R+ YGA +PKGG + Sbjct: 61 RASKVVGSWRLEECTLYVTLEPCVMCAGAIVMSRIPRVVYGAVDPKGGCTGSLMNLLEQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E +++DFFK R Sbjct: 121 QFNHRAIVESGILENECSTLLRDFFKNIR 149 >gi|152981408|ref|YP_001353698.1| hypothetical protein mma_2008 [Janthinobacterium sp. Marseille] gi|151281485|gb|ABR89895.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 159 Score = 233 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 84/147 (57%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +FM AL++A+NA E+PVGAV V + ++I+ N+ D TAHAEI+A+R Sbjct: 2 QDAIFMRQALDQARNAWTLGEVPVGAVVVKDGEVIATGFNQPIGTHDPTAHAEIMALRAA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 IL LP +L+VTLEPC MC+ A+ AR+ R+ +GA +PK G + + Sbjct: 62 ASILGNYRLPGCELFVTLEPCVMCSGAMMHARLARVVFGAPDPKTGACGSVVNLFEQNQL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ +++DFF ERR Sbjct: 122 NHHTQFIGGVLADECSALLKDFFAERR 148 >gi|27467245|ref|NP_763882.1| Cu binding protein (Mn oxidation [Staphylococcus epidermidis ATCC 12228] gi|27314788|gb|AAO03924.1|AE016745_23 Cu binding protein (Mn oxidation [Staphylococcus epidermidis ATCC 12228] gi|329734672|gb|EGG70979.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus epidermidis VCU028] Length = 168 Score = 233 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKK + +M A+ EA A E+P+GAV V ++I+RA N L+ TAHAE +AI Sbjct: 1 MKKNHDYMRLAINEAHKAKALGEVPIGAVIVKEGQVIARAHNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L E LYVTLEPC MCA I ++RI ++ YGA++PKGG + Sbjct: 61 RASEVVGSWRLEECTLYVTLEPCVMCAGTIIMSRIPKVVYGATDPKGGCSGSLMNLLEQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E+ ++++ FFKE R Sbjct: 121 QFNHRATVEKGILEEECAELLRSFFKEIR 149 >gi|229159196|ref|ZP_04287222.1| hypothetical protein bcere0009_110 [Bacillus cereus R309803] gi|228624277|gb|EEK81077.1| hypothetical protein bcere0009_110 [Bacillus cereus R309803] Length = 166 Score = 233 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 62/151 (41%), Positives = 87/151 (57%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEAQ A E+P+GAV VL+ ++IS A N + AHAE+LA Sbjct: 1 MEQDQDIYFMQLAIEEAQKAEEIQEVPIGAVIVLDGEVISSAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 DERFNHQCEVVTGVLEEECGTLLTNFFRELR 151 >gi|229009532|ref|ZP_04166761.1| hypothetical protein bmyco0001_110 [Bacillus mycoides DSM 2048] gi|229131029|ref|ZP_04259944.1| hypothetical protein bcere0014_100 [Bacillus cereus BDRD-ST196] gi|228652424|gb|EEL08346.1| hypothetical protein bcere0014_100 [Bacillus cereus BDRD-ST196] gi|228751743|gb|EEM01540.1| hypothetical protein bmyco0001_110 [Bacillus mycoides DSM 2048] Length = 164 Score = 233 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 63/149 (42%), Positives = 87/149 (58%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI Sbjct: 1 MERDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + LYVTLEPC MCA I L+RI+R+ YGAS+PKGG T Sbjct: 61 EACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRIKRVVYGASDPKGGCAGTLMNLLTDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ PG+ E+ ++ FF+E R Sbjct: 121 RFNHQCEVVPGVLEEECGTLLTIFFRELR 149 >gi|158319077|ref|YP_001511584.1| CMP/dCMP deaminase zinc-binding [Alkaliphilus oremlandii OhILAs] gi|158139276|gb|ABW17588.1| CMP/dCMP deaminase zinc-binding [Alkaliphilus oremlandii OhILAs] Length = 154 Score = 233 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM A+EEA+ A + E+P+GAV V +N+II R N K+ +HAEI+AI+ Sbjct: 1 MVLEENFMLEAIEEAKKAFNKKEVPIGAVVVKDNEIIGRGHNLRETTKNSISHAEIMAIQ 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + LYVT+EPC MCA AI +RI+++ GA +PK G + + Sbjct: 61 EACKFLGGWRLTDCTLYVTIEPCPMCAGAILQSRIQKVVIGAMDPKAGACGSLVNLLNDS 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ E+ ++++FFK R Sbjct: 121 RFNHQTEIEQGVLEEECSLLMKEFFKALR 149 >gi|206889673|ref|YP_002249189.1| cytosine deaminase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741611|gb|ACI20668.1| cytosine deaminase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 154 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 69/146 (47%), Positives = 88/146 (60%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL+EA+ A + EIPVGA+ V+N +IIS+A N D TAHAEILAIR Sbjct: 7 DEYFMKEALKEAEKAYEKGEIPVGALIVVNGEIISKAHNIKETTFDPTAHAEILAIREAA 66 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 RIL L + LYVT EPC MC+ AI +RI+RL YG ++PKGG + + + Sbjct: 67 RILGAWRLTDATLYVTKEPCIMCSGAIVNSRIKRLVYGCNDPKGGAVVSLYNILNDKRLN 126 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H EI GI E+ R I++ FFKE R Sbjct: 127 HQVEITNGILEEECRVILKRFFKELR 152 >gi|329729486|gb|EGG65889.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus epidermidis VCU144] Length = 168 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKK + +M A+ EA A E+P+GAV V ++I+RA N L+ TAHAE +AI Sbjct: 1 MKKNHDYMRLAINEAHKAKALGEVPIGAVIVKEGQVIARAHNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L E LYVTLEPC MCA I ++RI ++ YGA++PKGG + Sbjct: 61 RASEVVGSWRLEECTLYVTLEPCVMCAGTIIMSRIPKVVYGATDPKGGCSGSLMNLLEQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E+ ++++ FFKE R Sbjct: 121 QFNHRATVEKGILEEECAELLRSFFKEIR 149 >gi|332800258|ref|YP_004461757.1| CMP/dCMP deaminase zinc-binding protein [Tepidanaerobacter sp. Re1] gi|332697993|gb|AEE92450.1| CMP/dCMP deaminase zinc-binding protein [Tepidanaerobacter sp. Re1] Length = 160 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 62/148 (41%), Positives = 88/148 (59%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM A++EA+ A +E+P+GAV V +++I+RA N L+D TAHAE+LAIR Sbjct: 8 KDDFFFMRQAIQEAKRAMEIDEVPIGAVIVKADEVIARAHNLRETLQDATAHAELLAIRK 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C +L L LYVTLEPC MCA A+ L+R+ RL +GA +PKGG + Sbjct: 68 ACEVLGTWRLEGCTLYVTLEPCPMCAGAVILSRVDRLVFGAKDPKGGACGSLMNLPADER 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P+I GI I++ FF+++R Sbjct: 128 FNHRPKIAAGIMADECGNILKKFFQDKR 155 >gi|228918972|ref|ZP_04082353.1| hypothetical protein bthur0011_100 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840687|gb|EEM85947.1| hypothetical protein bthur0011_100 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 166 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 62/151 (41%), Positives = 87/151 (57%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 MK+ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LA Sbjct: 1 MKQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 DERFNHQCEVVSGVLEEECGTLLTNFFRELR 151 >gi|134094605|ref|YP_001099680.1| tRNA-specific adenosine deaminase [Herminiimonas arsenicoxydans] gi|133738508|emb|CAL61553.1| tRNA-specific adenosine deaminase [Herminiimonas arsenicoxydans] Length = 170 Score = 232 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 86/148 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + ++M AL++A NA E+PVGAV V + ++I+ N+ D TAHAEI+A+R Sbjct: 9 TQDEIWMRQALDQAHNAWALGEVPVGAVVVKDGQVIATGFNQPIGTHDPTAHAEIMALRA 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 IL LP +LYVTLEPC MC+ A+ AR+ R+ +GAS+PK G + + Sbjct: 69 AATILGNYRLPGCELYVTLEPCVMCSGAMMHARLARVVFGASDPKTGACGSIVNLFEQNQ 128 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ Q +++DFF ERR Sbjct: 129 LNHHTQLTGGLMAQECGALLKDFFAERR 156 >gi|229039926|ref|ZP_04189692.1| hypothetical protein bcere0027_100 [Bacillus cereus AH676] gi|228727416|gb|EEL78607.1| hypothetical protein bcere0027_100 [Bacillus cereus AH676] Length = 166 Score = 232 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 62/151 (41%), Positives = 87/151 (57%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 MK+ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LA Sbjct: 1 MKQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDDACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 DERFNHQCEVVSGVLEEECGTLLTNFFRELR 151 >gi|308066929|ref|YP_003868534.1| hypothetical protein PPE_00098 [Paenibacillus polymyxa E681] gi|305856208|gb|ADM67996.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 163 Score = 232 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 75/147 (51%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A++EA A E+P+GAV V +N+II R N D TAHAE++AIR Sbjct: 2 DHAYWMKEAIQEAYKAEALGEVPIGAVIVKDNEIIGRGYNLRETDADPTAHAEMVAIRQA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L + LYVTLEPC MCA AI +R+ L YG ++PK G Sbjct: 62 SEHLGAWRLLDCRLYVTLEPCPMCAGAIVQSRVPHLIYGTTDPKAGCAGTLMNLLQEPRF 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ ++ FF+ R Sbjct: 122 NHCTEVNSGVLQEECASLLTSFFRNLR 148 >gi|291549089|emb|CBL25351.1| Cytosine/adenosine deaminases [Ruminococcus torques L2-14] Length = 163 Score = 232 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL++A+ A E P+G V V +KII+R NR K+ AHAE+ AI+ Sbjct: 1 MTTDEKYMRAALKQAEKAYNLGETPIGCVIVHEDKIIARGYNRRNTDKNPLAHAEVAAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L E LYVTLEPC MCA AI +RI R+ G NPK G + + Sbjct: 61 KASKKLGDWRLEECTLYVTLEPCQMCAGAIVQSRIPRVVVGCMNPKAGCTGSILNLLDIQ 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E+ Q+++ FF+E R Sbjct: 121 AFNHQADLTTGVLEEECSQLMKQFFRELR 149 >gi|314932786|ref|ZP_07840155.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus caprae C87] gi|313654467|gb|EFS18220.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus caprae C87] Length = 168 Score = 232 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ +M A++EAQ A E+P+GAV V N+++I+ A N L+ TAHAE +AI Sbjct: 1 MRTDKDYMRLAIKEAQKAQALGEVPIGAVIVKNDQVIAHAHNLRESLQLPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +++ L E LYVTLEPC MCA AI ++RI R+ YGA +PKGG + Sbjct: 61 RASKVVGSWRLEECTLYVTLEPCVMCAGAIVMSRIPRVVYGAVDPKGGCTGSLMNLLEKP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E +++DFFK R Sbjct: 121 QFNHRAIVESGILENECSTLLRDFFKNIR 149 >gi|228937324|ref|ZP_04099972.1| hypothetical protein bthur0008_110 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970210|ref|ZP_04130871.1| hypothetical protein bthur0003_100 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228976780|ref|ZP_04137194.1| hypothetical protein bthur0002_100 [Bacillus thuringiensis Bt407] gi|228782942|gb|EEM31106.1| hypothetical protein bthur0002_100 [Bacillus thuringiensis Bt407] gi|228789511|gb|EEM37429.1| hypothetical protein bthur0003_100 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228822349|gb|EEM68329.1| hypothetical protein bthur0008_110 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326937814|gb|AEA13710.1| cytosine deaminase [Bacillus thuringiensis serovar chinensis CT-43] Length = 166 Score = 232 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LA Sbjct: 1 MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 DERFNHQCEVVSGVLEEECGTLLTNFFRELR 151 >gi|206972670|ref|ZP_03233610.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus AH1134] gi|228950569|ref|ZP_04112705.1| hypothetical protein bthur0006_110 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229077294|ref|ZP_04209977.1| hypothetical protein bcere0023_200 [Bacillus cereus Rock4-2] gi|229176621|ref|ZP_04304027.1| hypothetical protein bcere0005_100 [Bacillus cereus 172560W] gi|206732390|gb|EDZ49572.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus AH1134] gi|228606851|gb|EEK64266.1| hypothetical protein bcere0005_100 [Bacillus cereus 172560W] gi|228706017|gb|EEL58322.1| hypothetical protein bcere0023_200 [Bacillus cereus Rock4-2] gi|228809112|gb|EEM55595.1| hypothetical protein bthur0006_110 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 166 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 86/151 (56%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LA Sbjct: 1 MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ FF+E R Sbjct: 121 DERFNHQCEVVSGVLEEECGTLLTSFFRELR 151 >gi|228956462|ref|ZP_04118260.1| hypothetical protein bthur0005_100 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228803219|gb|EEM50039.1| hypothetical protein bthur0005_100 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 166 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 62/151 (41%), Positives = 87/151 (57%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VL+ +IIS A N + AHAE+LA Sbjct: 1 MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEIISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDDACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 DERFNHQCEVVSGVLEEECGTLLTNFFRELR 151 >gi|312142718|ref|YP_003994164.1| CMP/dCMP deaminase zinc-binding protein [Halanaerobium sp. 'sapolanicus'] gi|311903369|gb|ADQ13810.1| CMP/dCMP deaminase zinc-binding protein [Halanaerobium sp. 'sapolanicus'] Length = 149 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 90/149 (60%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL EA+ A R E+P+GAV V +++++ R N + +D T+HAEI+A++ Sbjct: 1 MNFDQKYMQMALAEARKAYQRAEVPIGAVVVCDDRVVGRGFNLREQTQDPTSHAEIIALK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L + LYVTLEPC MCA AI +RI+RL Y A++PK G +++ Q Sbjct: 61 EAAKEQASWRLEDCQLYVTLEPCPMCAGAILQSRIKRLVYAAADPKAGAVKSLYQLLGDD 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E + Q+++DFF+E R Sbjct: 121 RFNHQVEVVSGVMEAEAAQLLKDFFRELR 149 >gi|218234516|ref|YP_002364872.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus B4264] gi|218162473|gb|ACK62465.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus B4264] Length = 166 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LA Sbjct: 1 MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDDACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 DDRFNHQCEVVSGVLEEECGTLLTNFFRELR 151 >gi|315644422|ref|ZP_07897555.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus vortex V453] gi|315280172|gb|EFU43465.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus vortex V453] Length = 163 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 51/147 (34%), Positives = 74/147 (50%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A+ EA+ A E+P+GAV V ++II R N D TAHAE++AIR Sbjct: 15 NHEHWMREAIAEARKAEELGEVPIGAVIVRGDEIIGRGYNLRETTYDGTAHAEMVAIREA 74 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + LYVTLEPC MCA AI +R+ +L YG +PK G Sbjct: 75 SQHLGAWRLLDCRLYVTLEPCPMCAGAIVQSRVPQLIYGTGDPKAGCAGTLMNLLQEPRF 134 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ ++ FF+ R Sbjct: 135 NHRTTVIDGVLQEECASLLTQFFRRLR 161 >gi|282849118|ref|ZP_06258503.1| cytidine and deoxycytidylate deaminase zinc-binding region [Veillonella parvula ATCC 17745] gi|282580822|gb|EFB86220.1| cytidine and deoxycytidylate deaminase zinc-binding region [Veillonella parvula ATCC 17745] Length = 181 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 70/148 (47%), Positives = 88/148 (59%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM ALEEA A EIP+GA+ V NN IISR NR D TAHAE+L IR Sbjct: 17 SRDEYFMGFALEEAHKAYALGEIPIGAILVQNNTIISRHHNRRELDHDATAHAEVLVIRE 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C +L + L LYVT+EPC MCA AI +RI R+ YGAS+ KGG +E+ + Sbjct: 77 ACDVLKRWRLTGCTLYVTIEPCPMCAGAIINSRIDRVVYGASDYKGGAVESLFNVLSHPG 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ QI++DFFKERR Sbjct: 137 LNHEPELASGVLGDECSQIMKDFFKERR 164 >gi|294795071|ref|ZP_06760206.1| LOW QUALITY PROTEIN: cytidine/deoxycytidylate deaminase family protein [Veillonella sp. 3_1_44] gi|294454433|gb|EFG22807.1| LOW QUALITY PROTEIN: cytidine/deoxycytidylate deaminase family protein [Veillonella sp. 3_1_44] Length = 164 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 70/148 (47%), Positives = 88/148 (59%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM ALEEA A EIP+GA+ V NN IISR NR D TAHAE+L IR Sbjct: 17 SRDEYFMGFALEEAHKAYALGEIPIGAILVQNNTIISRHHNRRELDHDATAHAEVLVIRE 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C +L + L LYVT+EPC MCA AI +RI R+ YGAS+ KGG +E+ + Sbjct: 77 ACDVLKRWRLTGCTLYVTIEPCPMCAGAIINSRIDRVVYGASDYKGGAVESLFNVLSHPG 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ QI++DFFKERR Sbjct: 137 LNHEPELASGVLGDECSQIMKDFFKERR 164 >gi|152973870|ref|YP_001373387.1| CMP/dCMP deaminase zinc-binding [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152022622|gb|ABS20392.1| CMP/dCMP deaminase zinc-binding [Bacillus cytotoxicus NVH 391-98] Length = 164 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 62/149 (41%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ FM A+EEA+ A E+P+GAV VL+ K+IS A N + AHAE+LAI Sbjct: 1 MEQDMYFMKLAIEEAKKAEKIEEVPIGAVLVLDGKVISSAHNLRETEQRSIAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 KACKALGTWRLEHATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ FF+E R Sbjct: 121 RFNHQCEVVSGVMEEECGALLTSFFRELR 149 >gi|319399688|gb|EFV87937.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Staphylococcus epidermidis FRI909] Length = 168 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 86/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKK + +M A++EA A E+P+GAV V +++I+RA N L+ TAHAE +AI Sbjct: 1 MKKNHDYMRLAIKEAHKAKALGEVPIGAVIVKEDQVIARAHNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L E LYVTLEPC MCA I ++RI ++ YGA++PKGG + Sbjct: 61 RASEVVGSWRLEECTLYVTLEPCVMCAGTIIMSRIPKVVYGATDPKGGCSGSLMNLLEQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E+ ++++ FFKE R Sbjct: 121 QFNHRAIVEKGILEEECAELLRSFFKEIR 149 >gi|229188306|ref|ZP_04315357.1| Uncharacterized deaminase yaaJ [Bacillus cereus ATCC 10876] gi|228595174|gb|EEK52942.1| Uncharacterized deaminase yaaJ [Bacillus cereus ATCC 10876] Length = 166 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 62/151 (41%), Positives = 86/151 (56%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VLN ++IS A N + AHAE+LA Sbjct: 1 MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLNGEVISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ FF+E R Sbjct: 121 DERFNHQCEVVSGVLEEECGTLLTSFFRELR 151 >gi|229067785|ref|ZP_04201104.1| hypothetical protein bcere0025_110 [Bacillus cereus F65185] gi|228715338|gb|EEL67195.1| hypothetical protein bcere0025_110 [Bacillus cereus F65185] Length = 166 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 86/151 (56%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LA Sbjct: 1 MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ FF+E R Sbjct: 121 DERFNHQCEVVSGVLEEECGTLLTSFFRELR 151 >gi|196251180|ref|ZP_03149855.1| CMP/dCMP deaminase zinc-binding [Geobacillus sp. G11MC16] gi|196209306|gb|EDY04090.1| CMP/dCMP deaminase zinc-binding [Geobacillus sp. G11MC16] Length = 169 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+EEA+ A E+P+GAV V + ++I+RA N + AHAEILAI Sbjct: 10 MNNDEYYMRLAIEEAKKAEQIGEVPIGAVIVQDGRVIARAHNLRETEQRAIAHAEILAID 69 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L LYVTLEPC MCA AI L+RI R+ +GAS+PKGG + Sbjct: 70 EACQATGSWRLERATLYVTLEPCAMCAGAIVLSRIERVVFGASDPKGGCAGTLMNLLQES 129 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ ++ DFF+ R Sbjct: 130 RFNHQADVTSGVLASECGSLLSDFFRRLR 158 >gi|229165011|ref|ZP_04292809.1| hypothetical protein bcere0007_110 [Bacillus cereus AH621] gi|228618463|gb|EEK75490.1| hypothetical protein bcere0007_110 [Bacillus cereus AH621] Length = 164 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 63/149 (42%), Positives = 87/149 (58%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI Sbjct: 1 MERDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + LYVTLEPC MCA I L+RI+R+ YGAS+PKGG T Sbjct: 61 EACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRIKRVIYGASDPKGGCAGTLMNLLTDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ PG+ E+ ++ FF+E R Sbjct: 121 RFNHQCEVVPGVLEEECGTLLTIFFRELR 149 >gi|229142827|ref|ZP_04271271.1| hypothetical protein bcere0012_100 [Bacillus cereus BDRD-ST24] gi|229148430|ref|ZP_04276688.1| hypothetical protein bcere0011_100 [Bacillus cereus m1550] gi|296500855|ref|YP_003662555.1| cytosine deaminase [Bacillus thuringiensis BMB171] gi|228635039|gb|EEK91610.1| hypothetical protein bcere0011_100 [Bacillus cereus m1550] gi|228640641|gb|EEK97027.1| hypothetical protein bcere0012_100 [Bacillus cereus BDRD-ST24] gi|296321907|gb|ADH04835.1| cytosine deaminase [Bacillus thuringiensis BMB171] Length = 166 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LA Sbjct: 1 MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDDACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 DERFNHQCEVVSGVLEEECGTLLTNFFRELR 151 >gi|197285737|ref|YP_002151609.1| tRNA-specific adenosine deaminase [Proteus mirabilis HI4320] gi|194683224|emb|CAR43904.1| tRNA-specific adenosine deaminase [Proteus mirabilis HI4320] Length = 176 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +K +M A+E+A A EIPVGAV V NKII++ N + D TAHAEI+A+R Sbjct: 4 IKDDIYWMHKAIEQAHKAQQLGEIPVGAVLVAENKIIAKGWNHSIIDNDPTAHAEIMALR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 G + L L + LY+TLEPC MCA AI +R++R+ YGAS+ K G + Sbjct: 64 KGGKHLQNYRLLDATLYITLEPCVMCAGAIVHSRVKRVVYGASDLKTGAAGSFIDILQHP 123 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + Q++ FFK RR Sbjct: 124 GMNHKVEITSGVLGEECAQLLSQFFKMRR 152 >gi|291537693|emb|CBL10805.1| Cytosine/adenosine deaminases [Roseburia intestinalis M50/1] Length = 154 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ +A+ A +E+P+G V V ++KII+R NR + AHAE+ AIR Sbjct: 1 MNQDEKYMKAAIRQAKKAYALDEVPIGCVIVQDDKIIARGYNRRNTEGNTLAHAELTAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + +YVTLEPC MCA AI +R++++ G+ NPK G + + Sbjct: 61 KASKKTGDWRLEDCTMYVTLEPCQMCAGAIVQSRMKKVVIGSMNPKAGCAGSVLNLLQMQ 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + ++ FFKE R Sbjct: 121 QFNHQVEIEKGVLGEECSAMLSTFFKELR 149 >gi|229107707|ref|ZP_04237345.1| hypothetical protein bcere0018_100 [Bacillus cereus Rock1-15] gi|228675747|gb|EEL30953.1| hypothetical protein bcere0018_100 [Bacillus cereus Rock1-15] Length = 166 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LA Sbjct: 1 MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDDACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 DERFNHQCEVVSGVLEEECGALLTNFFRELR 151 >gi|166031359|ref|ZP_02234188.1| hypothetical protein DORFOR_01047 [Dorea formicigenerans ATCC 27755] gi|166028764|gb|EDR47521.1| hypothetical protein DORFOR_01047 [Dorea formicigenerans ATCC 27755] Length = 157 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+++A+ A E+P+G V V +KII+R NR K+ AHAE+ AIR Sbjct: 1 MTADEKYMREAIKQAKKAYAIGEVPIGCVIVYQDKIIARGYNRRTIDKNTLAHAELQAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L E +YVTLEPC MC+ AI +R+ R+ G NPK G + + Sbjct: 61 KASKKMEDWRLEECTMYVTLEPCQMCSGAIVQSRMTRVVVGCMNPKAGCAGSILNLLQMP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ Q+++ FFKE R Sbjct: 121 QFNHQVELTTGVLEEECSQMMKTFFKELR 149 >gi|294792948|ref|ZP_06758094.1| LOW QUALITY PROTEIN: cytidine/deoxycytidylate deaminase family protein [Veillonella sp. 6_1_27] gi|294455893|gb|EFG24257.1| LOW QUALITY PROTEIN: cytidine/deoxycytidylate deaminase family protein [Veillonella sp. 6_1_27] Length = 164 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 70/148 (47%), Positives = 89/148 (60%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM+ ALEEA A EIP+GA+ V NN IISR NR D TAHAE+L IR Sbjct: 17 TRDEYFMAFALEEAHKAYDLGEIPIGAILVQNNTIISRHHNRRELDHDATAHAEVLVIRE 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C +L + L LYVT+EPC MCA AI +RI R+ YGAS+ KGG +E+ + Sbjct: 77 ACGVLKRWRLTGCTLYVTIEPCPMCAGAIINSRIDRVVYGASDYKGGAVESLFNVLSHPG 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ QI++DFFKERR Sbjct: 137 LNHEPELASGVLGDECSQIMKDFFKERR 164 >gi|229015424|ref|ZP_04172427.1| hypothetical protein bcere0030_220 [Bacillus cereus AH1273] gi|229021629|ref|ZP_04178217.1| hypothetical protein bcere0029_110 [Bacillus cereus AH1272] gi|228739675|gb|EEL90083.1| hypothetical protein bcere0029_110 [Bacillus cereus AH1272] gi|228745866|gb|EEL95865.1| hypothetical protein bcere0030_220 [Bacillus cereus AH1273] Length = 164 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 87/149 (58%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM A+EEA+ A E+P+GAV VL++++IS A N + AHAE+LAI Sbjct: 1 MDRDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDDEVISVAHNLRETEQRSIAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 EACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 RFNHQCEVVAGVLEEECGTLLTNFFRELR 149 >gi|240145078|ref|ZP_04743679.1| tRNA-specific adenosine deaminase [Roseburia intestinalis L1-82] gi|257202749|gb|EEV01034.1| tRNA-specific adenosine deaminase [Roseburia intestinalis L1-82] gi|291537828|emb|CBL10939.1| Cytosine/adenosine deaminases [Roseburia intestinalis XB6B4] Length = 154 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ +A+ A +E+P+G V V N+KII+R NR + AHAE+ AIR Sbjct: 1 MNQDEKYMKAAIRQAKKAYALDEVPIGCVIVQNDKIIARGYNRRNTEGNTLAHAELTAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + +YVTLEPC MCA AI +R++++ G+ NPK G + + Sbjct: 61 KASKKTGDWRLEDCTMYVTLEPCQMCAGAIVQSRMKKVVIGSMNPKAGCAGSVLNLLQMQ 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + ++ FFKE R Sbjct: 121 QFNHQVEIEKGVLGEECSAMLSTFFKELR 149 >gi|57866115|ref|YP_187800.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus epidermidis RP62A] gi|242241897|ref|ZP_04796342.1| deaminase [Staphylococcus epidermidis W23144] gi|251809981|ref|ZP_04824454.1| deaminase [Staphylococcus epidermidis BCM-HMP0060] gi|282874984|ref|ZP_06283859.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus epidermidis SK135] gi|57636773|gb|AAW53561.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus epidermidis RP62A] gi|242234675|gb|EES36987.1| deaminase [Staphylococcus epidermidis W23144] gi|251806524|gb|EES59181.1| deaminase [Staphylococcus epidermidis BCM-HMP0060] gi|281296312|gb|EFA88831.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus epidermidis SK135] Length = 168 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKK + +M A+ EA A E+P+GAV V +++I+RA N L+ TAHAE +AI Sbjct: 1 MKKNHDYMRLAINEAHKAKALGEVPIGAVIVKEDQVIARAHNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L E LYVTLEPC MCA I ++RI ++ YGA++PKGG + Sbjct: 61 RASEVVGSWRLEECTLYVTLEPCVMCAGTIIMSRIPKVVYGATDPKGGCSGSLMNLLEQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E+ ++++ FFKE R Sbjct: 121 QFNHRAIVEKGILEEECAELLRSFFKEIR 149 >gi|289551636|ref|YP_003472540.1| tRNA-specific adenosine-34 deaminase [Staphylococcus lugdunensis HKU09-01] gi|289181167|gb|ADC88412.1| tRNA-specific adenosine-34 deaminase [Staphylococcus lugdunensis HKU09-01] Length = 158 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ +M A+ EA+ A E+P+GAV V + ++I+RA N + TAHAE +AI Sbjct: 1 MRNDEYYMKIAIAEARKAEAIGEVPIGAVIVKDTQVIARAHNLRETSQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L L LYVTLEPC MCA AI ++RI R+ YGA +PKGG + Sbjct: 61 RASEVLGSWRLEACTLYVTLEPCVMCAGAIVMSRIPRVVYGAIDPKGGCSGSLMNLLEQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ EQ Q+++ FF+ R Sbjct: 121 QLNHQAIVKTGVLEQECGQLLRSFFQRLR 149 >gi|229074082|ref|ZP_04207131.1| hypothetical protein bcere0024_110 [Bacillus cereus Rock4-18] gi|229094742|ref|ZP_04225750.1| hypothetical protein bcere0020_110 [Bacillus cereus Rock3-29] gi|229100808|ref|ZP_04231626.1| hypothetical protein bcere0019_200 [Bacillus cereus Rock3-28] gi|228682615|gb|EEL36674.1| hypothetical protein bcere0019_200 [Bacillus cereus Rock3-28] gi|228688680|gb|EEL42550.1| hypothetical protein bcere0020_110 [Bacillus cereus Rock3-29] gi|228709045|gb|EEL61169.1| hypothetical protein bcere0024_110 [Bacillus cereus Rock4-18] Length = 166 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LA Sbjct: 1 MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 DERFNHQCEVVTGVLEEECGTLLTNFFRELR 151 >gi|332971231|gb|EGK10194.1| zinc-binding domain protein [Desmospora sp. 8437] Length = 152 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 60/145 (41%), Positives = 84/145 (57%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + +M A+ EA+ A + E+P+GAV V +II R N +D TAHAE++AIR R Sbjct: 4 DQWMMEAIREAEQAEAKGEVPIGAVLVREGEIIGRGHNLRESHQDPTAHAEMIAIREAAR 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 +L L +LYVTLEPC MCA AI L+R+ L YGA +PKGG +H Sbjct: 64 LLGGWRLAGCELYVTLEPCPMCAGAILLSRLDTLIYGAYDPKGGCAGTLMNLPRDDRFNH 123 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ GI EQ ++++DFF++ R Sbjct: 124 QVEVVGGILEQECGELLRDFFRKLR 148 >gi|259048082|ref|ZP_05738483.1| tRNA-specific adenosine deaminase [Granulicatella adiacens ATCC 49175] gi|259035143|gb|EEW36398.1| tRNA-specific adenosine deaminase [Granulicatella adiacens ATCC 49175] Length = 168 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 88/149 (59%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EAQ A + E+P+GAV VLN +II R N + +D T HAEI AIR Sbjct: 3 LQEKEFFMREALKEAQKAYDQEEVPIGAVVVLNGEIIGRGHNLREKEQDATLHAEIKAIR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + +L+VTLEPC MC+ A+ LAR++++ +GA +PK G + Sbjct: 63 QANQHLGSWRLEDCELFVTLEPCPMCSGAMILARMKKVVFGAFDPKAGTAGTFMNLLQDS 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E ++I+Q FFK R Sbjct: 123 RFNHQVEVEQGILEDECKEILQQFFKGLR 151 >gi|239825602|ref|YP_002948226.1| CMP/dCMP deaminase zinc-binding [Geobacillus sp. WCH70] gi|239805895|gb|ACS22960.1| CMP/dCMP deaminase zinc-binding [Geobacillus sp. WCH70] Length = 160 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+EEA+ A E+P+GA+ V + II+RA N + AHAEILAI Sbjct: 1 MVNDEYYMRLAIEEAKKAEQIGEVPIGAIIVQDGHIIARAHNLRETEQRAIAHAEILAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ + L + LYVTLEPC MCA AI LARI+R+ +GAS+PKGG Sbjct: 61 KACKEVGSWRLEDATLYVTLEPCAMCAGAIVLARIKRVVFGASDPKGGCAGTLMNLLQEG 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI + Q++ FF++ R Sbjct: 121 RFNHQAEVTSGILGEECGQMLSSFFRKLR 149 >gi|229053868|ref|ZP_04195305.1| hypothetical protein bcere0026_110 [Bacillus cereus AH603] gi|228721478|gb|EEL72995.1| hypothetical protein bcere0026_110 [Bacillus cereus AH603] Length = 164 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 62/149 (41%), Positives = 86/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI Sbjct: 1 MERDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + LYVTLEPC MCA I L+RI+R+ YGAS+PKGG T Sbjct: 61 EACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRIKRVVYGASDPKGGCAGTLMNLLTDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ FF+E R Sbjct: 121 RFNHQCEVVAGVLEEECGTLLTIFFRELR 149 >gi|315659096|ref|ZP_07911961.1| zinc-binding domain protein [Staphylococcus lugdunensis M23590] gi|315495820|gb|EFU84150.1| zinc-binding domain protein [Staphylococcus lugdunensis M23590] Length = 158 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ +M A+ EA+ A E+P+GAV V + ++I+RA N + TAHAE +AI Sbjct: 1 MRNDEYYMKIAIAEARKAEAIGEVPIGAVIVKDTQVIARAHNLRETSQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L L LYVTLEPC MCA AI ++RI R+ YGA +PKGG + Sbjct: 61 RASEVLGSWRLEACTLYVTLEPCVMCAGAIVMSRIPRVVYGAIDPKGGCSGSLMNLLEQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ EQ Q+++ FF+ R Sbjct: 121 QFNHQAIVKTGVLEQECGQLLRSFFQRLR 149 >gi|167464544|ref|ZP_02329633.1| possible nucleoside deaminase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 152 Score = 230 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 75/149 (50%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ +M A+ EA A +E+P+GAV V +II R N D TAHAE++AIR Sbjct: 1 MEEHEQWMQEAISEALKAETIHEVPIGAVIVHEGRIIGRGHNLRETSMDPTAHAEMIAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L LYVTLEPC MCA AI +RI R+ YG +PK G Sbjct: 61 EASEYLRAWRLLNCTLYVTLEPCPMCAGAIVQSRILRVVYGTIDPKAGCAGTLMNLLQED 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI + ++ FF++ R Sbjct: 121 RFNHRVEVINGILREECSSLLTSFFRKLR 149 >gi|228963119|ref|ZP_04124290.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar sotto str. T04001] gi|228796575|gb|EEM44012.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar sotto str. T04001] Length = 195 Score = 230 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LA Sbjct: 1 MEQDRDIYFMQLAIEEAKKAEEMQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 DERFNHQCEVVTGVLEEECGTLLTNFFRELR 151 >gi|146312685|ref|YP_001177759.1| tRNA-specific adenosine deaminase [Enterobacter sp. 638] gi|145319561|gb|ABP61708.1| tRNA-adenosine deaminase [Enterobacter sp. 638] Length = 169 Score = 230 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 54/147 (36%), Positives = 76/147 (51%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 7 NHEYWMRHALLLAKRAWDEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MC+ A+ +RI L +GA + K G + Sbjct: 67 GLVLQNYRLLDTTLYVTLEPCVMCSGAMVHSRIGTLVFGARDEKTGAAGSLMNVLGHPGM 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ ++ DFF+ RR Sbjct: 127 NHQVQVIDGVLAPECSGLLSDFFRMRR 153 >gi|325288211|ref|YP_004264392.1| tRNA-adenosine deaminase [Syntrophobotulus glycolicus DSM 8271] gi|324963612|gb|ADY54391.1| tRNA-adenosine deaminase [Syntrophobotulus glycolicus DSM 8271] Length = 148 Score = 230 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 86/147 (58%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K +M AL++A+ A ++E+P+GAV V N +I++ A N +D TAHAE+LAI+ Sbjct: 2 KHEDWMRLALKQAETALEKDEVPIGAVIVKNGEILALAHNEKETNQDPTAHAEMLAIKRA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L LYVTLEPC MCA AI +RI L YGA + KGG + + Sbjct: 62 AQKLGAWRLSGATLYVTLEPCPMCAGAIIQSRIETLVYGADDSKGGAVGSVLNVLQHQLW 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI E+ S ++++ FF+ +R Sbjct: 122 NHKVEIITGILEEESARLLKGFFRSKR 148 >gi|85857921|ref|YP_460123.1| tRNA-specific adenosine deaminase [Syntrophus aciditrophicus SB] gi|85721012|gb|ABC75955.1| tRNA-specific adenosine deaminase [Syntrophus aciditrophicus SB] Length = 187 Score = 230 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 61/146 (41%), Positives = 88/146 (60%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ALEEA+ AA E+P+GAV V N++I+R+ N + D TAHAEILAIR Sbjct: 28 DERWMRLALEEARLAASEGEVPIGAVIVRENEVIARSHNMPVDRHDPTAHAEILAIREAA 87 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L + LYVTLEPC MCA AI AR++RL YG +PKGG +++ + + + Sbjct: 88 EKMKNYRLTGMTLYVTLEPCIMCAGAILQARLKRLVYGTGDPKGGAVDSLYRLLQDSRLN 147 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ + +I+ FF+E+R Sbjct: 148 HFVEVTGGVLQASCAEILSGFFREKR 173 >gi|311028951|ref|ZP_07707041.1| CMP/dCMP deaminase zinc-binding protein [Bacillus sp. m3-13] Length = 161 Score = 230 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+EEA+ A E+P+GAV V + K+IS+ N + HAEI+ I Sbjct: 2 QDEHFMKLAIEEAKKAEALKEVPIGAVLVHDGKVISKGYNLRETTQRSITHAEIMVIDQA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C L L E LYVTLEPC MCA AI +RI ++ YGA +PK G + Sbjct: 62 CEALQTWRLEEATLYVTLEPCPMCAGAIIQSRIMKVVYGAKDPKAGCAGTLMNILQDSRF 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E+ +++ FF++ R Sbjct: 122 NHQTEVVSGIMEEECGELLSSFFRKLR 148 >gi|163119172|ref|YP_077304.2| putative cytidine/deoxycytidylate deaminase, zinc-binding region YaaJ [Bacillus licheniformis ATCC 14580] gi|145902675|gb|AAU21666.2| putative Cytidine/deoxycytidylate deaminase, zinc-binding region YaaJ [Bacillus licheniformis ATCC 14580] Length = 196 Score = 230 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ EA+ A + E+P+GAV VL+ +II+RA N + AHAE+L I Sbjct: 37 MTQDEFYMKEAVNEARKAEEKGEVPIGAVLVLDGEIIARAHNLRETEQRSVAHAEMLVIE 96 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR L L LYVTLEPC MCA A L+RI ++ +GAS+PKGG Sbjct: 97 EACRKLGTWRLERAVLYVTLEPCPMCAGAAVLSRIDKVVFGASDPKGGCAGTLMNLLQEE 156 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ +++ DFF++ R Sbjct: 157 RFNHQAEVVSGVMEEECGRMLSDFFRKLR 185 >gi|30018294|ref|NP_829925.1| cytosine deaminase [Bacillus cereus ATCC 14579] gi|229125538|ref|ZP_04254572.1| hypothetical protein bcere0015_100 [Bacillus cereus BDRD-Cer4] gi|29893834|gb|AAP07126.1| Cytosine deaminase [Bacillus cereus ATCC 14579] gi|228657922|gb|EEL13726.1| hypothetical protein bcere0015_100 [Bacillus cereus BDRD-Cer4] Length = 166 Score = 230 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LA Sbjct: 1 MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDDACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 DERFNHQCEVVSGVLEEECGTLLTNFFRELR 151 >gi|308187798|ref|YP_003931929.1| tRNA-specific adenosine deaminase [Pantoea vagans C9-1] gi|308058308|gb|ADO10480.1| tRNA-specific adenosine deaminase [Pantoea vagans C9-1] Length = 163 Score = 230 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 83/148 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL A+ A + E+PVGAV V N+++I NR D TAHAEI+A+R Sbjct: 3 QQDEYWMRHALSLARRAWEQGEVPVGAVLVQNDRVIGEGWNRPIGQHDPTAHAEIMALRQ 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G ++L L + LYVTLEPC MCA A+ +RI RL YGA + K G + Sbjct: 63 GGKVLENYRLLDTTLYVTLEPCVMCAGAMVHSRISRLVYGAHDIKSGAAGSLLDVLGHPG 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E++ G+ + ++ DFF+ RR Sbjct: 123 MNHQVELHSGVLAEECAAMLSDFFRMRR 150 >gi|218283248|ref|ZP_03489309.1| hypothetical protein EUBIFOR_01897 [Eubacterium biforme DSM 3989] gi|218216003|gb|EEC89541.1| hypothetical protein EUBIFOR_01897 [Eubacterium biforme DSM 3989] Length = 158 Score = 230 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 59/150 (39%), Positives = 91/150 (60%), Gaps = 1/150 (0%) Query: 1 MKKGN-VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M + +M A+++A+ A +E+P+G V V ++KII+R N+ L+ AHAEI+AI Sbjct: 1 MNMDDVKWMKEAIKQAKKAESYDEVPIGCVIVKDDKIIARGYNKRETLQQSIAHAEIMAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + C+ L L + LYVTLEPC MCA AI +RI+ + YGAS+PKGG + T + + Sbjct: 61 QKACKKLGTWRLEDCVLYVTLEPCPMCAGAIIQSRIKEVVYGASDPKGGCVGTCTNLFEV 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +H P GI E +++ FFK++R Sbjct: 121 SEFNHHPIYRRGILESDCSDLLKHFFKKKR 150 >gi|293367940|ref|ZP_06614578.1| tRNA-specific adenosine deaminase [Staphylococcus epidermidis M23864:W2(grey)] gi|291317969|gb|EFE58377.1| tRNA-specific adenosine deaminase [Staphylococcus epidermidis M23864:W2(grey)] gi|329737844|gb|EGG74076.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus epidermidis VCU045] Length = 168 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKK + +M A+ EA A E+P+GAV V ++I+RA N L+ TAHAE +AI Sbjct: 1 MKKNHDYMRLAINEAHKAKALGEVPIGAVIVKEGQVIARAHNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L E LYVTLEPC MCA I ++RI ++ YGA++ KGG + Sbjct: 61 RASEVVGSWRLEECTLYVTLEPCVMCAGTIIMSRIPKVVYGATDSKGGCSGSLMNLLEQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E+ ++++ FFKE R Sbjct: 121 QFNHRATVEKGILEEECAELLRSFFKEIR 149 >gi|225575495|ref|ZP_03784105.1| hypothetical protein RUMHYD_03586 [Blautia hydrogenotrophica DSM 10507] gi|225037292|gb|EEG47538.1| hypothetical protein RUMHYD_03586 [Blautia hydrogenotrophica DSM 10507] Length = 183 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ +A+ A +E+P+G V V + KII+R NR ++ +HAE+ AI+ Sbjct: 24 MTEQEKYMREAIRQAKKAWALDEVPIGCVIVFDGKIIARGYNRRNTDRNTLSHAELNAIK 83 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L +YVTLEPC MCA AI ARI + G+ NPK G + + Sbjct: 84 KASKKLGDWRLEGCTMYVTLEPCQMCAGAIVQARIDEVVIGSMNPKAGCAGSVLNLLDIP 143 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I GI ++ ++ DFF+E R Sbjct: 144 QFNHQVKITRGILQEECSALLSDFFRELR 172 >gi|282915881|ref|ZP_06323646.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus D139] gi|283769715|ref|ZP_06342607.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus H19] gi|282320177|gb|EFB50522.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus D139] gi|283459862|gb|EFC06952.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus H19] Length = 156 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM+ A+EEA+ AA E+P+GAV ++++I+RA N L+ TAHAE +AI Sbjct: 1 MTNDIYFMTLAIEEAKKAARLGEVPIGAVITKDDEVIARAHNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L LYVTLEPC MCA I ++RI R+ YGA +PKGG + + Sbjct: 61 RAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQS 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ ++ FFK R Sbjct: 121 NFNHRAIVDKGVLKEACSTLLTTFFKNLR 149 >gi|154484290|ref|ZP_02026738.1| hypothetical protein EUBVEN_02003 [Eubacterium ventriosum ATCC 27560] gi|149734767|gb|EDM50684.1| hypothetical protein EUBVEN_02003 [Eubacterium ventriosum ATCC 27560] Length = 178 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 84/148 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 KK N +M A+++A+ AA E+P+G V V +KII R NR K+ +HAE+ AI+ Sbjct: 25 KKANKYMKEAIKQAKKAASIGEVPIGCVIVYQDKIIGRGYNRRMVDKNTLSHAELNAIKK 84 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L + +LYVT EPC MCA AI ARI+++Y G NPK G + + Sbjct: 85 ASKKLDDWRLDDCELYVTTEPCQMCAGAIVQARIKKVYIGCMNPKAGCAGSIMNLLQVDK 144 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E+ +++DFF+ R Sbjct: 145 FNHQVEMEKGILEEECSNLLKDFFRNLR 172 >gi|329930226|ref|ZP_08283839.1| cytidine and deoxycytidylate deaminase zinc-binding region [Paenibacillus sp. HGF5] gi|328935248|gb|EGG31729.1| cytidine and deoxycytidylate deaminase zinc-binding region [Paenibacillus sp. HGF5] Length = 164 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 75/148 (50%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M A+ EA+ A E+P+GAV V ++II R N D TAHAE++AIR Sbjct: 14 ENHERWMREAIAEARKAEELGEVPIGAVIVRGDEIIGRGYNLRETTYDGTAHAEMVAIRE 73 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L L + LYVTLEPC MCA AI +R+ +L YG +PK G Sbjct: 74 ASRHLGAWRLLDCRLYVTLEPCPMCAGAIVQSRVPQLIYGTGDPKAGCAGTLMNLLQEPR 133 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ ++ FF+ R Sbjct: 134 FNHRTHVVDGVLQEECASLLTQFFRRLR 161 >gi|288549944|ref|ZP_05968716.2| tRNA-specific adenosine deaminase [Enterobacter cancerogenus ATCC 35316] gi|288317287|gb|EFC56225.1| tRNA-specific adenosine deaminase [Enterobacter cancerogenus ATCC 35316] Length = 168 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 77/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M AL AQ A E+PVGAV V NN++I NR D TAHAEI+A+R Sbjct: 6 RDHEYWMRHALTLAQRAWEEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQ 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G ++ L + LYVTLEPC MC+ A+ +RI L +GA + K G + Sbjct: 66 GGLVMQNYRLLDTTLYVTLEPCVMCSGAMVHSRIGTLVFGARDEKTGAAGSLMDVLGHPG 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I G+ ++ DFF+ RR Sbjct: 126 MNHQVKIIGGVLAPECSGLLSDFFRMRR 153 >gi|157144506|ref|YP_001451825.1| tRNA-specific adenosine deaminase [Citrobacter koseri ATCC BAA-895] gi|157081711|gb|ABV11389.1| hypothetical protein CKO_00224 [Citrobacter koseri ATCC BAA-895] Length = 180 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 20 SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGHHDPTAHAEIMALRQG 79 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 80 GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 139 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ ++ DFF+ RR Sbjct: 140 NHRVEITEGVLRDECAALLSDFFRMRR 166 >gi|228898775|ref|ZP_04063059.1| hypothetical protein bthur0014_110 [Bacillus thuringiensis IBL 4222] gi|228860867|gb|EEN05243.1| hypothetical protein bthur0014_110 [Bacillus thuringiensis IBL 4222] Length = 166 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LA Sbjct: 1 MEQDRDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 DERFNHQCEVVTGVLEEECGTLLTNFFRELR 151 >gi|229113696|ref|ZP_04243133.1| Uncharacterized deaminase yaaJ [Bacillus cereus Rock1-3] gi|228669762|gb|EEL25167.1| Uncharacterized deaminase yaaJ [Bacillus cereus Rock1-3] Length = 166 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LA Sbjct: 1 MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDEACKNLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 DERFNHQCEVVTGVLEEECGTLLTNFFRELR 151 >gi|56418551|ref|YP_145869.1| hypothetical protein GK0016 [Geobacillus kaustophilus HTA426] gi|261417515|ref|YP_003251197.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y412MC61] gi|297528391|ref|YP_003669666.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. C56-T3] gi|319765173|ref|YP_004130674.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y412MC52] gi|56378393|dbj|BAD74301.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] gi|261373972|gb|ACX76715.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y412MC61] gi|297251643|gb|ADI25089.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. C56-T3] gi|317110039|gb|ADU92531.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y412MC52] Length = 165 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 78/149 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+EEA+ A E+P+GAV V + ++I+RA N + AHAEILAI Sbjct: 1 MNTDEYYMRLAMEEAKKAEQIGEVPIGAVIVQDGRVIARAHNLRETEQRAIAHAEILAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR L LYVTLEPC MCA AI L+RI R+ +GA +PKGG + Sbjct: 61 EACRATGSWRLERATLYVTLEPCAMCAGAIVLSRIERVVFGAFDPKGGCAGTLMNLLQES 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ ++ FF+ R Sbjct: 121 RFNHQVKVVSGVLADECGSLLSQFFRRLR 149 >gi|238917935|ref|YP_002931452.1| hypothetical protein EUBELI_02023 [Eubacterium eligens ATCC 27750] gi|238873295|gb|ACR73005.1| Hypothetical protein EUBELI_02023 [Eubacterium eligens ATCC 27750] Length = 176 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +M A+ +A+ A NE+P+G V V K+I R NR K HAEI AI+ Sbjct: 15 KDDYRYMKQAITQAKKAYKLNEVPIGCVIVYEGKVIGRGYNRRNTDKTSLGHAEITAIKK 74 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R ++ L LYVTLEPC MCA AI ARI R+ G+ NPK G + + T Sbjct: 75 ASRYMNDWRLENCTLYVTLEPCQMCAGAIVQARIPRVVIGSMNPKAGCAGSILNILQIPT 134 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ E+ +++ FFKE R Sbjct: 135 FNHQCEITKGVCEEECSEMLTTFFKELR 162 >gi|269797481|ref|YP_003311381.1| CMP/dCMP deaminase zinc-binding protein [Veillonella parvula DSM 2008] gi|269094110|gb|ACZ24101.1| CMP/dCMP deaminase zinc-binding protein [Veillonella parvula DSM 2008] Length = 169 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 70/148 (47%), Positives = 88/148 (59%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM ALEEA A EIP+GA+ V NN IISR NR D TAHAE+L IR Sbjct: 5 SRDEYFMGFALEEAHKAYALGEIPIGAILVQNNTIISRHHNRRELDHDATAHAEVLVIRE 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C +L + L LYVT+EPC MCA AI +RI R+ YGAS+ KGG +E+ + Sbjct: 65 ACDVLKRWRLTGCTLYVTIEPCPMCAGAIINSRIDRVVYGASDYKGGAVESLFNVLSHPG 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ QI++DFFKERR Sbjct: 125 LNHEPELASGVLGDECSQIMKDFFKERR 152 >gi|49482788|ref|YP_040012.1| deaminase [Staphylococcus aureus subsp. aureus MRSA252] gi|257424672|ref|ZP_05601099.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257427340|ref|ZP_05603739.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus 65-1322] gi|257429977|ref|ZP_05606361.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257432678|ref|ZP_05609038.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257435582|ref|ZP_05611630.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus M876] gi|282903146|ref|ZP_06311037.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus aureus subsp. aureus C160] gi|282904936|ref|ZP_06312794.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus Btn1260] gi|282907886|ref|ZP_06315721.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910199|ref|ZP_06318003.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus WBG10049] gi|282913391|ref|ZP_06321180.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus aureus subsp. aureus M899] gi|282923308|ref|ZP_06330988.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus C101] gi|283957356|ref|ZP_06374809.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus aureus subsp. aureus A017934/97] gi|293500437|ref|ZP_06666288.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus 58-424] gi|293509382|ref|ZP_06668093.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus M809] gi|293523969|ref|ZP_06670656.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus aureus subsp. aureus M1015] gi|295427097|ref|ZP_06819733.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590551|ref|ZP_06949190.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus MN8] gi|49240917|emb|CAG39584.1| putative deaminase [Staphylococcus aureus subsp. aureus MRSA252] gi|257272242|gb|EEV04365.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257275533|gb|EEV07006.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus 65-1322] gi|257279174|gb|EEV09775.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257282093|gb|EEV12228.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257284773|gb|EEV14892.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus M876] gi|282314176|gb|EFB44566.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus C101] gi|282322423|gb|EFB52745.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus aureus subsp. aureus M899] gi|282325591|gb|EFB55899.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus WBG10049] gi|282328270|gb|EFB58548.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331761|gb|EFB61272.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus Btn1260] gi|282596101|gb|EFC01062.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus aureus subsp. aureus C160] gi|283790807|gb|EFC29622.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus aureus subsp. aureus A017934/97] gi|290920932|gb|EFD97993.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus aureus subsp. aureus M1015] gi|291095442|gb|EFE25703.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus 58-424] gi|291467479|gb|EFF09994.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus M809] gi|295128885|gb|EFG58515.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576850|gb|EFH95565.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus MN8] gi|312439022|gb|ADQ78093.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus TCH60] gi|315193922|gb|EFU24316.1| putative deaminase [Staphylococcus aureus subsp. aureus CGS00] Length = 156 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM+ A+EEA+ AA E+P+GA+ ++++I+RA N L+ TAHAE +AI Sbjct: 1 MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L + LYVTLEPC MCA I ++RI R+ YGA +PKGG + + Sbjct: 61 RAAKVLGSWRLEDCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQS 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ ++ FFK R Sbjct: 121 NFNHRAIVDKGVLKEACSTLLTTFFKNLR 149 >gi|330686241|gb|EGG97853.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus epidermidis VCU121] Length = 168 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 88/149 (59%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ +M A+EEA+ A L E+P+GA+ V NN +I+RA N L+ TAHAE LAI Sbjct: 1 METDEYYMKIAIEEAKKAELLGEVPIGAIIVKNNHVIARAHNMRETLQQPTAHAEHLAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L + LYVTLEPC MCA I ++RI + YGA++PKGG + Sbjct: 61 RAAKVLGSWRLEDCTLYVTLEPCVMCAGTIVMSRIPYIKYGAADPKGGCSGSLMNLLNQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E++ ++++FF++ R Sbjct: 121 DFNHRAQVESGLLEEQCGDLLRNFFRKLR 149 >gi|228905818|ref|ZP_04069717.1| hypothetical protein bthur0013_110 [Bacillus thuringiensis IBL 200] gi|228853826|gb|EEM98584.1| hypothetical protein bthur0013_110 [Bacillus thuringiensis IBL 200] Length = 166 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LA Sbjct: 1 MEQDRDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 DERFNHQCEVVTGVLEEECGTLLTNFFRELR 151 >gi|238922727|ref|YP_002936240.1| cytidine and deoxycytidylate deaminase family protein [Eubacterium rectale ATCC 33656] gi|238874399|gb|ACR74106.1| cytidine and deoxycytidylate deaminase family protein [Eubacterium rectale ATCC 33656] Length = 162 Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 78/149 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+++A+ A +E+P+G V V +KII+R NR K+ AHAE+ AIR Sbjct: 6 MTQDEKYMKQAIKQAKKAYALDEVPIGCVIVAGDKIIARGYNRRNTDKNPLAHAELSAIR 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L E +YVTLEPC MCA AI ARI R+ GA NPK G + + Sbjct: 66 KASKKTGDWRLEECTMYVTLEPCQMCAGAIVQARIPRVVIGAMNPKAGCAGSIINLLQMQ 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI ++ FFKE R Sbjct: 126 QFNHQVQTDIGICGDECSTMLSTFFKELR 154 >gi|239637751|ref|ZP_04678718.1| tRNA-specific adenosine deaminase [Staphylococcus warneri L37603] gi|239596653|gb|EEQ79183.1| tRNA-specific adenosine deaminase [Staphylococcus warneri L37603] Length = 168 Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 87/149 (58%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ +M A++EA+ A L E+P+GA+ V N +I+RA N ++ TAHAE LAI Sbjct: 1 METDEYYMKLAIQEAKKAELLGEVPIGAIIVKNGHVIARAHNLRETMQQPTAHAEHLAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L + LYVTLEPC MCA I ++RI + YGA++PKGG + Sbjct: 61 RAAKVLGSWRLEDCTLYVTLEPCVMCAGTIVMSRIPYIKYGAADPKGGCSGSLMNLLNQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E++ ++++FF++ R Sbjct: 121 DFNHRAQVESGLLEEQCGDLLRNFFRKLR 149 >gi|88192205|pdb|2B3J|A Chain A, Crystal Structure Of Staphylococcus Aureus Trna Adenosine Deaminase, Tada, In Complex With Rna gi|88192206|pdb|2B3J|B Chain B, Crystal Structure Of Staphylococcus Aureus Trna Adenosine Deaminase, Tada, In Complex With Rna gi|88192207|pdb|2B3J|C Chain C, Crystal Structure Of Staphylococcus Aureus Trna Adenosine Deaminase, Tada, In Complex With Rna gi|88192208|pdb|2B3J|D Chain D, Crystal Structure Of Staphylococcus Aureus Trna Adenosine Deaminase, Tada, In Complex With Rna Length = 159 Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM+ A+EEA+ AA E+P+GA+ ++++I+RA N L+ TAHAE +AI Sbjct: 4 MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIE 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L LYVTLEPC MCA I ++RI R+ YGA +PKGG + + Sbjct: 64 RAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQS 123 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ ++ FFK R Sbjct: 124 NFNHRAIVDKGVLKEACSTLLTTFFKNLR 152 >gi|15923548|ref|NP_371082.1| cytosine deaminase [Staphylococcus aureus subsp. aureus Mu50] gi|15926236|ref|NP_373769.1| hypothetical protein SA0516 [Staphylococcus aureus subsp. aureus N315] gi|21282242|ref|NP_645330.1| hypothetical protein MW0513 [Staphylococcus aureus subsp. aureus MW2] gi|49485423|ref|YP_042644.1| putative deaminase [Staphylococcus aureus subsp. aureus MSSA476] gi|87160687|ref|YP_493246.1| putative deaminase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194321|ref|YP_499113.1| hypothetical protein SAOUHSC_00541 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148267018|ref|YP_001245961.1| CMP/dCMP deaminase, zinc-binding [Staphylococcus aureus subsp. aureus JH9] gi|150393065|ref|YP_001315740.1| CMP/dCMP deaminase zinc-binding [Staphylococcus aureus subsp. aureus JH1] gi|151220732|ref|YP_001331554.1| hypothetical protein NWMN_0520 [Staphylococcus aureus subsp. aureus str. Newman] gi|156978887|ref|YP_001441146.1| hypothetical protein SAHV_0556 [Staphylococcus aureus subsp. aureus Mu3] gi|161508798|ref|YP_001574457.1| deaminase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221141004|ref|ZP_03565497.1| deaminase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315668|ref|ZP_04838881.1| putative deaminase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732567|ref|ZP_04866732.1| deaminase [Staphylococcus aureus subsp. aureus TCH130] gi|255005352|ref|ZP_05143953.2| putative deaminase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795343|ref|ZP_05644322.1| deaminase [Staphylococcus aureus A9781] gi|258408970|ref|ZP_05681251.1| deaminase [Staphylococcus aureus A9763] gi|258420392|ref|ZP_05683335.1| tRNA-adenosine deaminase [Staphylococcus aureus A9719] gi|258422595|ref|ZP_05685501.1| CMP/dCMP deaminase, zinc-binding [Staphylococcus aureus A9635] gi|258439312|ref|ZP_05690244.1| cytosine deaminase [Staphylococcus aureus A9299] gi|258444052|ref|ZP_05692389.1| tRNA-adenosine deaminase [Staphylococcus aureus A8115] gi|258446321|ref|ZP_05694479.1| CMP/dCMP deaminase zinc-binding [Staphylococcus aureus A6300] gi|258448414|ref|ZP_05696529.1| deaminase [Staphylococcus aureus A6224] gi|258452708|ref|ZP_05700706.1| conserved hypothetical protein [Staphylococcus aureus A5948] gi|258453770|ref|ZP_05701744.1| cytosine deaminase [Staphylococcus aureus A5937] gi|262049601|ref|ZP_06022470.1| hypothetical protein SAD30_0395 [Staphylococcus aureus D30] gi|262052438|ref|ZP_06024638.1| hypothetical protein SA930_0274 [Staphylococcus aureus 930918-3] gi|269202181|ref|YP_003281450.1| putative tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus ED98] gi|282894994|ref|ZP_06303217.1| tRNA-adenosine deaminase [Staphylococcus aureus A8117] gi|282924473|ref|ZP_06332145.1| tRNA-adenosine deaminase [Staphylococcus aureus A9765] gi|282928896|ref|ZP_06336487.1| tRNA-adenosine deaminase [Staphylococcus aureus A10102] gi|294850335|ref|ZP_06791069.1| tRNA-adenosine deaminase [Staphylococcus aureus A9754] gi|295406935|ref|ZP_06816738.1| tRNA-adenosine deaminase [Staphylococcus aureus A8819] gi|297208728|ref|ZP_06925156.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297246241|ref|ZP_06930090.1| tRNA-adenosine deaminase [Staphylococcus aureus A8796] gi|300912818|ref|ZP_07130260.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus TCH70] gi|304381843|ref|ZP_07364490.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|13700450|dbj|BAB41747.1| SA0516 [Staphylococcus aureus subsp. aureus N315] gi|14246326|dbj|BAB56720.1| similar to cytosine deaminase [Staphylococcus aureus subsp. aureus Mu50] gi|21203678|dbj|BAB94378.1| MW0513 [Staphylococcus aureus subsp. aureus MW2] gi|49243866|emb|CAG42291.1| putative deaminase [Staphylococcus aureus subsp. aureus MSSA476] gi|87126661|gb|ABD21175.1| putative deaminase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201879|gb|ABD29689.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740087|gb|ABQ48385.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus JH9] gi|149945517|gb|ABR51453.1| CMP/dCMP deaminase zinc-binding [Staphylococcus aureus subsp. aureus JH1] gi|150373532|dbj|BAF66792.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus str. Newman] gi|156721022|dbj|BAF77439.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|160367607|gb|ABX28578.1| deaminase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253729496|gb|EES98225.1| deaminase [Staphylococcus aureus subsp. aureus TCH130] gi|257789315|gb|EEV27655.1| deaminase [Staphylococcus aureus A9781] gi|257840321|gb|EEV64784.1| deaminase [Staphylococcus aureus A9763] gi|257843582|gb|EEV67988.1| tRNA-adenosine deaminase [Staphylococcus aureus A9719] gi|257847167|gb|EEV71175.1| CMP/dCMP deaminase, zinc-binding [Staphylococcus aureus A9635] gi|257847649|gb|EEV71648.1| cytosine deaminase [Staphylococcus aureus A9299] gi|257850722|gb|EEV74667.1| tRNA-adenosine deaminase [Staphylococcus aureus A8115] gi|257854915|gb|EEV77860.1| CMP/dCMP deaminase zinc-binding [Staphylococcus aureus A6300] gi|257858283|gb|EEV81170.1| deaminase [Staphylococcus aureus A6224] gi|257859581|gb|EEV82431.1| conserved hypothetical protein [Staphylococcus aureus A5948] gi|257864026|gb|EEV86780.1| cytosine deaminase [Staphylococcus aureus A5937] gi|259159684|gb|EEW44728.1| hypothetical protein SA930_0274 [Staphylococcus aureus 930918-3] gi|259162341|gb|EEW46914.1| hypothetical protein SAD30_0395 [Staphylococcus aureus D30] gi|262074471|gb|ACY10444.1| putative tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus ED98] gi|269940131|emb|CBI48507.1| putative deaminase [Staphylococcus aureus subsp. aureus TW20] gi|282589504|gb|EFB94593.1| tRNA-adenosine deaminase [Staphylococcus aureus A10102] gi|282592884|gb|EFB97888.1| tRNA-adenosine deaminase [Staphylococcus aureus A9765] gi|282762676|gb|EFC02813.1| tRNA-adenosine deaminase [Staphylococcus aureus A8117] gi|285816259|gb|ADC36746.1| tRNA-specific adenosine-34 deaminase [Staphylococcus aureus 04-02981] gi|294822847|gb|EFG39282.1| tRNA-adenosine deaminase [Staphylococcus aureus A9754] gi|294968166|gb|EFG44192.1| tRNA-adenosine deaminase [Staphylococcus aureus A8819] gi|296886673|gb|EFH25578.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297176839|gb|EFH36097.1| tRNA-adenosine deaminase [Staphylococcus aureus A8796] gi|300885922|gb|EFK81125.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus TCH70] gi|302332271|gb|ADL22464.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus JKD6159] gi|302750450|gb|ADL64627.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304339629|gb|EFM05576.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312829054|emb|CBX33896.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128851|gb|EFT84850.1| deaminase [Staphylococcus aureus subsp. aureus CGS03] gi|315196629|gb|EFU26976.1| deaminase [Staphylococcus aureus subsp. aureus CGS01] gi|320141577|gb|EFW33416.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus aureus subsp. aureus MRSA131] gi|320141794|gb|EFW33622.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus aureus subsp. aureus MRSA177] gi|323439830|gb|EGA97547.1| putative deaminase [Staphylococcus aureus O11] gi|323443069|gb|EGB00689.1| putative deaminase [Staphylococcus aureus O46] gi|329313279|gb|AEB87692.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus T0131] gi|329727928|gb|EGG64377.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus aureus subsp. aureus 21172] gi|329731027|gb|EGG67400.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus aureus subsp. aureus 21189] gi|329731987|gb|EGG68343.1| cytidine and deoxycytidylate deaminase zinc-binding region [Staphylococcus aureus subsp. aureus 21193] Length = 156 Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM+ A+EEA+ AA E+P+GA+ ++++I+RA N L+ TAHAE +AI Sbjct: 1 MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L LYVTLEPC MCA I ++RI R+ YGA +PKGG + + Sbjct: 61 RAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQS 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ ++ FFK R Sbjct: 121 NFNHRAIVDKGVLKEACSTLLTTFFKNLR 149 >gi|261403958|ref|YP_003240199.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus sp. Y412MC10] gi|261280421|gb|ACX62392.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus sp. Y412MC10] Length = 164 Score = 229 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 75/148 (50%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M A+ EA+ A E+P+GAV V ++II R N D TAHAE++AIR Sbjct: 14 ENHERWMREAIAEARKAEELGEVPIGAVIVRGDEIIGRGYNLRETTYDGTAHAEMVAIRE 73 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L L + LYVTLEPC MCA AI +R+ +L YG +PK G Sbjct: 74 ASRHLGAWRLLDCRLYVTLEPCPMCAGAIVQSRVPQLIYGTGDPKAGCAGTLMNLLQEPR 133 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ ++ FF+ R Sbjct: 134 FNHRTHVVDGVLQEECASLLTQFFRRLR 161 >gi|218895158|ref|YP_002443569.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus G9842] gi|218541226|gb|ACK93620.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus G9842] Length = 166 Score = 229 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LA Sbjct: 1 MEQDRDIYFMQLAIEEAKKAEEMQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 DERFNHQCEVVTGVLEEECGTLLTNFFRELR 151 >gi|237732543|ref|ZP_04563024.1| tRNA-specific adenosine deaminase [Citrobacter sp. 30_2] gi|226908082|gb|EEH94000.1| tRNA-specific adenosine deaminase [Citrobacter sp. 30_2] Length = 182 Score = 229 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 24 SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGHHDPTAHAEIMALRQG 83 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 84 GLVLQNYRLLDATLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 143 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ DFF+ RR Sbjct: 144 NHRVEVTEGVLRDECATLLSDFFRMRR 170 >gi|295402713|ref|ZP_06812655.1| CMP/dCMP deaminase zinc-binding [Geobacillus thermoglucosidasius C56-YS93] gi|312109168|ref|YP_003987484.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y4.1MC1] gi|294975244|gb|EFG50880.1| CMP/dCMP deaminase zinc-binding [Geobacillus thermoglucosidasius C56-YS93] gi|311214269|gb|ADP72873.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y4.1MC1] Length = 161 Score = 229 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+EEA+ A E+P+GA+ V +I+RA N + AHAEILAI Sbjct: 1 MVNDEYYMRLAIEEAKQAEQIGEVPIGAIIVQGGNVIARAHNLRETAQRAIAHAEILAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L + LYVTLEPC MCA AI LARI+R+ +GAS+PKGG Sbjct: 61 EACKKAGSWRLEDATLYVTLEPCAMCAGAIVLARIKRVVFGASDPKGGCAGTLMNLLQEG 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ Q++ +FF++ R Sbjct: 121 RFNHQAEVIGGVLQEECGQMLSNFFRKLR 149 >gi|299542082|ref|ZP_07052398.1| hypothetical protein BFZC1_24048 [Lysinibacillus fusiformis ZC1] gi|298725397|gb|EFI66045.1| hypothetical protein BFZC1_24048 [Lysinibacillus fusiformis ZC1] Length = 171 Score = 229 bits (586), Expect = 9e-59, Method: Composition-based stats. Identities = 61/146 (41%), Positives = 84/146 (57%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +FM ALEEAQ AAL E+P+GAV V KII+RA N ++ T HAE+L I+ C Sbjct: 7 DRLFMKQALEEAQQAALLGEVPIGAVLVYEGKIIARAHNLRETTQNATTHAELLVIQEAC 66 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + + L + LYVTLEPC MCA AI +R+ R+ YGA + K G +++ + Sbjct: 67 KKIGSWRLEDTTLYVTLEPCPMCAGAILQSRVPRVVYGARDQKAGCVDSLYHLLNDERFN 126 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ GI + QI+ DFFK R Sbjct: 127 HDCDVTEGILAEECGQILTDFFKALR 152 >gi|163791639|ref|ZP_02186036.1| cytidine/deoxycytidylate deaminase family protein [Carnobacterium sp. AT7] gi|159873088|gb|EDP67195.1| cytidine/deoxycytidylate deaminase family protein [Carnobacterium sp. AT7] Length = 174 Score = 229 bits (586), Expect = 9e-59, Method: Composition-based stats. Identities = 63/149 (42%), Positives = 87/149 (58%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM A++EA A + E+P+GAV VLN KII R N E D T HAE+LAI+ Sbjct: 4 IEEKTYFMQEAIKEAHKAKEKLEVPIGAVVVLNGKIIGRGHNIREESNDATTHAEMLAIQ 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R L L E L+VTLEPC MC+ A+ L+RI+ LYYGAS+PKGG Sbjct: 64 EANRYLGNWRLEETQLFVTLEPCPMCSGAMILSRIKELYYGASDPKGGTAGTLMNLLDDN 123 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I G+ E+ ++ +FF+E R Sbjct: 124 RFNHQVQIEKGLLEEECSDLLSNFFRELR 152 >gi|311070665|ref|YP_003975588.1| tRNA specific adenosine deaminase [Bacillus atrophaeus 1942] gi|310871182|gb|ADP34657.1| tRNA specific adenosine deaminase [Bacillus atrophaeus 1942] Length = 161 Score = 229 bits (586), Expect = 9e-59, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K +M A++EA+ A E+P+GAV V+N+ I++RA N + AHAE+LAI Sbjct: 1 MTKDEFYMLEAIKEAKKAEEIGEVPIGAVLVMNDDIVARAHNLRETEQRSIAHAEMLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR L L LYVTLEPC MCA A+ L+R+ R+ +GA +PKGG Sbjct: 61 EACRTLGTWRLEGASLYVTLEPCPMCAGAVVLSRVDRVVFGAFDPKGGCSGTLMNLLQEE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ Q++ DFF+ R Sbjct: 121 RFNHQAEVVSGVLEKECGQMLSDFFRNLR 149 >gi|293376812|ref|ZP_06623032.1| cytidine and deoxycytidylate deaminase zinc-binding region [Turicibacter sanguinis PC909] gi|325845379|ref|ZP_08168678.1| cytidine and deoxycytidylate deaminase zinc-binding region [Turicibacter sp. HGF1] gi|292644564|gb|EFF62654.1| cytidine and deoxycytidylate deaminase zinc-binding region [Turicibacter sanguinis PC909] gi|325488594|gb|EGC91004.1| cytidine and deoxycytidylate deaminase zinc-binding region [Turicibacter sp. HGF1] Length = 162 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 54/147 (36%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K +M A+EEA+ A E+P+GAV V + +II+R N + AHAE++AI Sbjct: 2 KHITYMQAAIEEAKKAQNLGEVPIGAVIVKDGEIIARGYNLRETSQLSNAHAEMIAIAKA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ L + LYVTLEPC MCA AI +RI + +GA +PKGG + Sbjct: 62 NEMVGSWRLEDCTLYVTLEPCPMCAGAIVQSRIPTVVFGAHDPKGGCCGTIYNLLDESKF 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ Q++ DFF+ R Sbjct: 122 NHRCELVSGVLEEECGQLLSDFFRNLR 148 >gi|253731164|ref|ZP_04865329.1| deaminase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253725129|gb|EES93858.1| deaminase [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 156 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM+ A++EA+ AA E+P+GA+ ++++I+RA N L+ TAHAE +AI Sbjct: 1 MTNDIYFMTLAIKEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L LYVTLEPC MCA I ++RI R+ YGA +PKGG + + Sbjct: 61 RAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQS 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ ++ FFK R Sbjct: 121 NFNHRAIVDKGVLKEACSTLLTTFFKNLR 149 >gi|296104233|ref|YP_003614379.1| tRNA-specific adenosine deaminase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058692|gb|ADF63430.1| tRNA-specific adenosine deaminase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 168 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 54/147 (36%), Positives = 75/147 (51%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 7 SHEYWMRHALTLARRAWDEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MC+ A+ +RI L +GA + K G + Sbjct: 67 GLVLQNYRLLDTTLYVTLEPCVMCSGAMVHSRIGTLVFGARDEKTGAAGSLMDVLGHPGM 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ DFF+ RR Sbjct: 127 NHQVKTIGGVLAPECSGLLSDFFRMRR 153 >gi|260893961|ref|YP_003240058.1| CMP/dCMP deaminase zinc-binding protein [Ammonifex degensii KC4] gi|260866102|gb|ACX53208.1| CMP/dCMP deaminase zinc-binding protein [Ammonifex degensii KC4] Length = 151 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 62/142 (43%), Positives = 84/142 (59%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EA+ A +R E+PVGAVAVLN +II R N LKD TAHAEILA+R + + Sbjct: 1 MREALSEAEKAYVRGEVPVGAVAVLNGEIIGRGHNLRETLKDATAHAEILALREAAKKIG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L EV LY TLEPC MCA A+ R++R+ +GA +PK G + +H E Sbjct: 61 DWRLEEVTLYTTLEPCPMCAGALIQFRVKRVVFGAFDPKAGAAGSVVDLLRDPRFNHQVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ + S +++ FF+E R Sbjct: 121 VVGGVLAEESGALLKRFFQELR 142 >gi|331092011|ref|ZP_08340842.1| hypothetical protein HMPREF9477_01485 [Lachnospiraceae bacterium 2_1_46FAA] gi|330402212|gb|EGG81783.1| hypothetical protein HMPREF9477_01485 [Lachnospiraceae bacterium 2_1_46FAA] Length = 155 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+++A+ A NE+P+G V V +KIISR NR K+ AHAE++AI+ Sbjct: 1 MNQDEKYMREAIKQAKKAYEINEVPIGCVIVCEDKIISRGYNRRTTDKNPLAHAEMIAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L + +YVTLEPC MC+ AI +R++++ G N K G + + Sbjct: 61 KASKKVGDWRLEDCTMYVTLEPCQMCSGAIVQSRMKKVVVGCMNAKAGCAGSILNLLQMD 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++++FFKE R Sbjct: 121 EFNHQVELETGVLEEECSLLMKNFFKELR 149 >gi|255764464|ref|YP_003064771.2| Cytidine/deoxycytidylate deaminase, zinc-binding region [Candidatus Liberibacter asiaticus str. psy62] gi|254547815|gb|ACT56831.2| Cytidine/deoxycytidylate deaminase, zinc-binding region [Candidatus Liberibacter asiaticus str. psy62] Length = 149 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 149/149 (100%), Positives = 149/149 (100%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR Sbjct: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA Sbjct: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCHHSPEIYPGISEQRSRQIIQDFFKERR Sbjct: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 >gi|210613778|ref|ZP_03289892.1| hypothetical protein CLONEX_02100 [Clostridium nexile DSM 1787] gi|210150987|gb|EEA81995.1| hypothetical protein CLONEX_02100 [Clostridium nexile DSM 1787] Length = 158 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K +M A+++A+ A E+P+G V V +KII R NR K+ AHAE++AI+ Sbjct: 2 MNKDEKYMKEAIKQAKKAYALGEVPIGCVIVYEDKIIGRGYNRRTIDKNTIAHAEMMAIK 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L + +YVTLEPC MC+ AI +R++++ G NPK G + + Sbjct: 62 KASKKMDDWRLEDCTMYVTLEPCQMCSGAIVQSRMKKVVVGCMNPKAGCAGSILNLLQME 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++++FFKE R Sbjct: 122 EFNHQVELEIGVLEEECSALMKNFFKELR 150 >gi|284023569|ref|ZP_06377967.1| putative tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus 132] Length = 156 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM+ A+EEA+ AA E+P+GA+ ++++I+RA N L+ TAHAE +AI Sbjct: 1 MTNDIFFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L LYVTLEPC MCA I ++RI R+ YGA +PKGG + + Sbjct: 61 RAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQS 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ ++ FFK R Sbjct: 121 NFNHRAIVDKGVLKEACSTLLTTFFKNLR 149 >gi|145589597|ref|YP_001156194.1| CMP/dCMP deaminase, zinc-binding [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048003|gb|ABP34630.1| CMP/dCMP deaminase, zinc-binding protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 152 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 59/146 (40%), Positives = 87/146 (59%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM A+E+A+ AAL E+PVGAV V + K+IS A N+ D +AHAE+LA+R Sbjct: 7 DQQFMQQAIEQAKLAALAGEVPVGAVVVRDGKVISSAFNKPISTHDPSAHAEMLALRAAA 66 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + LP LYVTLEPC MC+ A+ AR+ R+ YGA++PK G + ++ + Sbjct: 67 QSEENYRLPGTTLYVTLEPCVMCSGAMLHARLDRVVYGAADPKTGAAGSVFDVFSSKQIN 126 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ + Q++++FFKERR Sbjct: 127 HQTSVEGGVMGEECGQLLRNFFKERR 152 >gi|296332941|ref|ZP_06875399.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305672716|ref|YP_003864387.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp. spizizenii str. W23] gi|296149905|gb|EFG90796.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305410959|gb|ADM36077.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp. spizizenii str. W23] Length = 161 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + ++M A++EA+ A + E+P+GAV V+N++II+RA N + AHAE+L I Sbjct: 1 MTQDELYMKEAIKEAKKAEEKGEVPIGAVLVVNDEIIARAHNLRETEQRSIAHAEMLVID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG Sbjct: 61 EACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGAFDPKGGCSGTIMNLLQEE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ FF+E R Sbjct: 121 RFNHQAEVVSGVLEEECGGMLSSFFRELR 149 >gi|323488468|ref|ZP_08093714.1| hypothetical protein GPDM_03987 [Planococcus donghaensis MPA1U2] gi|323397860|gb|EGA90660.1| hypothetical protein GPDM_03987 [Planococcus donghaensis MPA1U2] Length = 162 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+K + +M A+EEA AA + E+P+GAV V +++I+RA N + HAE+LAI+ Sbjct: 4 MEKDHFYMQLAIEEANKAAAKGEVPIGAVIVYKDEVIARAHNLRETTNNAVTHAELLAIQ 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C L L + LYVTLEPC MCA AI +RI + YGA + K G +++ + Sbjct: 64 EACLHLGNWRLEDTKLYVTLEPCPMCAGAILQSRIPHIVYGARDAKAGCVDSLYRLLNDD 123 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ + Q++ FF+ R Sbjct: 124 RFNHQCQVTENVLADECGQLLTQFFRNLR 152 >gi|291526516|emb|CBK92103.1| Cytosine/adenosine deaminases [Eubacterium rectale DSM 17629] gi|291527005|emb|CBK92591.1| Cytosine/adenosine deaminases [Eubacterium rectale M104/1] Length = 157 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 78/149 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+++A+ A +E+P+G V V +KII+R NR K+ AHAE+ AIR Sbjct: 1 MTQDEKYMKQAIKQAKKAYALDEVPIGCVIVAGDKIIARGYNRRNTDKNPLAHAELSAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L E +YVTLEPC MCA AI ARI R+ GA NPK G + + Sbjct: 61 KASKKTGDWRLEECTMYVTLEPCQMCAGAIVQARIPRVVIGAMNPKAGCAGSIINLLQMQ 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI ++ FFKE R Sbjct: 121 QFNHQVQTDIGICGDECSTMLSTFFKELR 149 >gi|298693889|gb|ADI97111.1| cytosine deaminase [Staphylococcus aureus subsp. aureus ED133] Length = 156 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM+ A+EEA+ AA E+P+GA+ ++++I+RA N L+ TAHAE +AI Sbjct: 1 MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L LYVTLEPC MCA I ++RI R+ YGA +PKGG + + Sbjct: 61 RAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQS 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ ++ FFK R Sbjct: 121 NFNHRAIVDKGVLKEACSTLLTTFFKNLR 149 >gi|296136215|ref|YP_003643457.1| CMP/dCMP deaminase zinc-binding protein [Thiomonas intermedia K12] gi|295796337|gb|ADG31127.1| CMP/dCMP deaminase zinc-binding protein [Thiomonas intermedia K12] Length = 187 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 63/149 (42%), Positives = 87/149 (58%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ FM AL++AQNA L E+PVGAV V + K+I+ NR D TAHAEI+A+R Sbjct: 9 LEADRAFMRLALDQAQNAWLLGEVPVGAVIVKDGKVIATGYNRPIGDHDPTAHAEIVALR 68 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L LPE LYVTLEPC MCA A+ AR R+ +GA +PK G + + Sbjct: 69 QAAHLLGNYRLPECTLYVTLEPCAMCAMALLHARFARVVFGARDPKTGAAGSVVDLFAEP 128 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I P I ++ ++QDFF+ RR Sbjct: 129 RLNHHCDITPEIEQEACSALLQDFFRARR 157 >gi|296276694|ref|ZP_06859201.1| putative tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus MR1] Length = 156 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM+ A+EEA+ AA E+P+GA+ ++++I+RA N L+ TAHAE +AI Sbjct: 1 MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L LYVTLEPC MCA I ++RI R+ YGA +PKGG + + Sbjct: 61 RAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSSSLMNLLQQS 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ ++ FFK R Sbjct: 121 NFNHRAIVDKGVLKEACSTLLTTFFKNLR 149 >gi|253577340|ref|ZP_04854657.1| CMP/dCMP deaminase, zinc-binding [Paenibacillus sp. oral taxon 786 str. D14] gi|251843240|gb|EES71271.1| CMP/dCMP deaminase, zinc-binding [Paenibacillus sp. oral taxon 786 str. D14] Length = 165 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 52/146 (35%), Positives = 74/146 (50%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M+ A+ EA+ A E+P+GAV V ++I+ R N D TAHAE++AIR Sbjct: 18 HEYWMAEAIREARKAEAIGEVPIGAVIVRGDEIVGRGHNLRESSLDGTAHAEMIAIREAS 77 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L L LYVTLEPC MCA AI R+ + YGA +PK G + Sbjct: 78 ERLGAWRLLHCRLYVTLEPCPMCAGAIVQCRVPHVIYGAPDPKAGCAGTLMNLLQEPRFN 137 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H +I GI ++ ++ +FF+ R Sbjct: 138 HRTDITSGILQEECASLLTEFFRRLR 163 >gi|194018067|ref|ZP_03056672.1| tRNA-specific adenosine deaminase [Bacillus pumilus ATCC 7061] gi|194010259|gb|EDW19836.1| tRNA-specific adenosine deaminase [Bacillus pumilus ATCC 7061] Length = 158 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM A+ EA A E+P+GA+ V++++I+SRA N + AHAE+LAI Sbjct: 1 MTRDEQFMQEAISEALKAEQIGEVPIGAIIVVDDQIVSRAHNLRETEQRSIAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L + LYVTLEPC MCA AI L+R++++ +GA +PKGG Sbjct: 61 EACKTTGSWRLEDAVLYVTLEPCPMCAGAIVLSRVKKVVFGAYDPKGGCAGTLMNLLDDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E +++ FF+ R Sbjct: 121 RFNHQSEVIGGVLENECGELLSQFFRNLR 149 >gi|313616657|gb|EFR89453.1| tRNA-specific adenosine deaminase [Listeria innocua FSL S4-378] Length = 156 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 87/149 (58%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI Sbjct: 1 MEQD-FFMQQALEEAKKAREIGEVPIGAVVVLDGEIIGRAHNLRETTQNAVTHAELLAIE 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + Sbjct: 60 DACKHQNSWRLSGAELYVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDD 119 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ ++ G+ E S +++ FF+E R Sbjct: 120 RFNHTCKVEAGLLEAESSAMLKSFFRELR 148 >gi|283469850|emb|CAQ49061.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp. aureus ST398] Length = 156 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM+ A+EEA+ AA E+P+GAV +++I+RA N L+ TAHAE +AI Sbjct: 1 MTNDIYFMTLAIEEAKKAARLGEVPIGAVITKGDEVIARAHNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L LYVTLEPC MCA I ++RI R+ YGA +PKGG + + Sbjct: 61 RAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQS 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ ++ FFK R Sbjct: 121 NFNHRAIVDKGVLKEACSTLLTTFFKNLR 149 >gi|160914820|ref|ZP_02077034.1| hypothetical protein EUBDOL_00828 [Eubacterium dolichum DSM 3991] gi|158433360|gb|EDP11649.1| hypothetical protein EUBDOL_00828 [Eubacterium dolichum DSM 3991] Length = 152 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 60/146 (41%), Positives = 86/146 (58%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM A++EA+ A L +E+P+G V V ++KII+R N + TAHAEI+AI C Sbjct: 2 NEKFMVEAIKEAKKAELIDEVPIGCVIVKDDKIIARGHNLRESKQRSTAHAEIIAIEKAC 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R L L LYVTLEPC MC+ AI +RI + YGA +PKGG +E+ Y + + Sbjct: 62 RKLKSWRLEGCSLYVTLEPCPMCSGAILQSRIEHVVYGAKDPKGGCMESCMNMYEVKGFN 121 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H P++ G+ E +++ FFK +R Sbjct: 122 HYPDVIGGVLEDECGSLLKTFFKRKR 147 >gi|73663465|ref|YP_302246.1| cytosine adenosine deaminase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495980|dbj|BAE19301.1| putative cytosine adenosine deaminase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 163 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+EEA+ A E+P+GA+ V N++II+RA N ++ TAHAE +AI+ Sbjct: 1 MTNHEFYMEVAIEEAKKAGNIGEVPIGAIIVKNDEIIARAHNLRESEQNPTAHAEHIAIQ 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L LYVTLEPC MCA +I ++RI + YGA +PKGG + Sbjct: 61 RAAAALGSWRLEGCTLYVTLEPCVMCAGSIVMSRIPSVIYGAKDPKGGCAGSLMNLLQEP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E+ Q++ FFK R Sbjct: 121 RFNHRATVEFGILEESCSQLLTAFFKNIR 149 >gi|238753915|ref|ZP_04615275.1| tRNA-specific adenosine deaminase [Yersinia ruckeri ATCC 29473] gi|238707903|gb|EEQ00261.1| tRNA-specific adenosine deaminase [Yersinia ruckeri ATCC 29473] Length = 171 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 61/147 (41%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M ALE AQ A E+PVGAV VL+N+ I NR D TAHAE++A+R G Sbjct: 6 NDEYWMRQALELAQRAQEEGEVPVGAVLVLDNQAIGIGWNRPIVHHDPTAHAEMMALRQG 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L LYVTLEPC MCA A+ +RIRRL YGA++ K G + Sbjct: 66 GQALQNYRLLNATLYVTLEPCVMCAGAMVHSRIRRLVYGANDIKTGAAGSLLDILRHPGM 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + Q + FF++RR Sbjct: 126 NHQVEITAGVLAEECSQTLSTFFRQRR 152 >gi|254361249|ref|ZP_04977392.1| cytosine deaminase [Mannheimia haemolytica PHL213] gi|153092745|gb|EDN73788.1| cytosine deaminase [Mannheimia haemolytica PHL213] Length = 174 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 62/149 (41%), Positives = 86/149 (57%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ FM AL+ A A + EIPVGAV V N +II R N+ +L D +AHAE+ AIR Sbjct: 16 EQDIAFMQYALDLADLAEAKGEIPVGAVLVDKNQQIIGRGWNQTIQLCDPSAHAEMQAIR 75 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + LYVTLEPC MCA AI +RI+RL +GAS+ K G + + + Sbjct: 76 QAGQTLGNYRLLDCTLYVTLEPCPMCAGAILHSRIKRLVFGASDYKTGAVGSRYHLFEDY 135 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E++ + + Q I DFFK+RR Sbjct: 136 KMNHFLEVHGNVLGRECSQKISDFFKQRR 164 >gi|294340450|emb|CAZ88831.1| tRNA-specific adenosine deaminase [Thiomonas sp. 3As] Length = 187 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 64/149 (42%), Positives = 87/149 (58%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ FM AL++AQNA L E+PVGAV V + K+I+ NR D TAHAEI+AIR Sbjct: 9 LEADRAFMRLALDQAQNAWLLGEVPVGAVIVKDGKVIATGYNRPIGDHDPTAHAEIVAIR 68 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L LPE LYVTLEPC MCA A+ AR R+ +GA +PK G + + Sbjct: 69 QAAHLLGNYRLPECTLYVTLEPCAMCAMALLHARFARVVFGARDPKTGAAGSVVDLFAEP 128 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I P I ++ ++QDFF+ RR Sbjct: 129 RLNHHCDITPEIEQEACSALLQDFFRARR 157 >gi|138893694|ref|YP_001124147.1| cytosine deaminase [Geobacillus thermodenitrificans NG80-2] gi|134265207|gb|ABO65402.1| Cytosine deaminase [Geobacillus thermodenitrificans NG80-2] Length = 161 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+EEA+ A E+P+GAV V + ++I+RA N + AHAEILAI Sbjct: 2 MNNDEYYMRLAIEEAKKAEQIGEVPIGAVIVQDGRVIARAHNLRETEQRAIAHAEILAIA 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L LYVTLEPC MCA AI L+RI R+ +GAS+PKGG + Sbjct: 62 EACQATGSWRLERATLYVTLEPCAMCAGAIVLSRIERVVFGASDPKGGCAGTLMNLLQES 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ ++ DFF+ R Sbjct: 122 RFNHQADVTSGVLASECGSLLSDFFRRLR 150 >gi|317049171|ref|YP_004116819.1| CMP/dCMP deaminase zinc-binding protein [Pantoea sp. At-9b] gi|316950788|gb|ADU70263.1| CMP/dCMP deaminase zinc-binding protein [Pantoea sp. At-9b] Length = 165 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M AL A+ A + E+PVGAV V + +I NR D TAHAEI+A+R Sbjct: 4 QTDEYWMRHALRLARLAWEQGEVPVGAVLVQGDTVIGEGWNRPIGQHDPTAHAEIMALRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G ++L L + LYVTLEPC MCA A+ +RI RL YGA + K G + Sbjct: 64 GGKVLENYRLLDTTLYVTLEPCVMCAGAMVHSRITRLVYGAKDEKTGAAGSLLDVIGHPG 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I G+ + ++ DFF+ RR Sbjct: 124 MNHQIQIDSGVLAEECAAMLSDFFRMRR 151 >gi|261492526|ref|ZP_05989079.1| cytosine deaminase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496801|ref|ZP_05993175.1| cytosine deaminase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307548|gb|EEY08877.1| cytosine deaminase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311685|gb|EEY12835.1| cytosine deaminase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 174 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ FM AL+ A A + EIPVGAV V N +II R N+ +L D +AHAE+ AIR Sbjct: 16 EQDIAFMQYALDLADLAEAKGEIPVGAVLVDKNQQIIGRGWNQTIQLCDPSAHAEMQAIR 75 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + LYVTLEPC MCA AI +RI+RL +GAS+ K G + + + Sbjct: 76 QAGQTLGNYRLLDCTLYVTLEPCPMCAGAILHSRIKRLVFGASDYKTGAVGSRYHLFEDY 135 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ + + Q I DFFK+RR Sbjct: 136 KMNHFLEVQGNVLGRECSQKISDFFKQRR 164 >gi|242240191|ref|YP_002988372.1| CMP/dCMP deaminase zinc-binding [Dickeya dadantii Ech703] gi|242132248|gb|ACS86550.1| CMP/dCMP deaminase zinc-binding [Dickeya dadantii Ech703] Length = 164 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL AQ A E+PVGAV V K+I NR D TAHAE++A+R G Sbjct: 6 DDEYWMRHALILAQRAWDEGEVPVGAVLVQGGKVIGEGWNRPIGQHDPTAHAEMMALRQG 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R+L L + LY+TLEPC MCA A+ +RI RL YGA++ K G + Sbjct: 66 GRVLQNYRLLDTTLYITLEPCIMCAGAMVHSRISRLVYGAADAKTGAAGSLVDILRHPGM 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ + ++ DFF+ RR Sbjct: 126 NHQVAITSGVLAEACSTLLSDFFRMRR 152 >gi|268318039|ref|YP_003291758.1| CMP/dCMP deaminase zinc-binding protein [Rhodothermus marinus DSM 4252] gi|262335573|gb|ACY49370.1| CMP/dCMP deaminase zinc-binding protein [Rhodothermus marinus DSM 4252] Length = 158 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M AL EA+ A E+PVGAV V +++I+ R N +LKD TAHAE+LAI Sbjct: 7 LEGHRRWMEAALREAEQAFEEGEVPVGAVVVKDDRIVGRGHNCVEQLKDPTAHAEMLAIT 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C L + L LYVTLEPC MCA AI AR+ R+ +GA + K G Sbjct: 67 AACATLDTKYLRGCTLYVTLEPCPMCAGAIVWARLDRVVFGAFDEKAGAASTLYNILQDP 126 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ +R+ ++Q FF+ERR Sbjct: 127 RLNHRVEVISGVEAERAAALLQRFFRERR 155 >gi|206978348|ref|ZP_03239222.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus H3081.97] gi|217957598|ref|YP_002336140.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus AH187] gi|222093791|ref|YP_002527839.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus Q1] gi|228983277|ref|ZP_04143492.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229136865|ref|ZP_04265494.1| Uncharacterized deaminase yaaJ [Bacillus cereus BDRD-ST26] gi|229153801|ref|ZP_04281933.1| Uncharacterized deaminase yaaJ [Bacillus cereus ATCC 4342] gi|206743440|gb|EDZ54873.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus H3081.97] gi|217065488|gb|ACJ79738.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus AH187] gi|221237837|gb|ACM10547.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus Q1] gi|228629670|gb|EEK86365.1| Uncharacterized deaminase yaaJ [Bacillus cereus ATCC 4342] gi|228646600|gb|EEL02805.1| Uncharacterized deaminase yaaJ [Bacillus cereus BDRD-ST26] gi|228776457|gb|EEM24808.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 166 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 62/151 (41%), Positives = 87/151 (57%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VLN ++IS A N + AHAE+LA Sbjct: 1 MERDQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 DERFNHQCEVVAGVLEEECGTLLTNFFRELR 151 >gi|326802964|ref|YP_004320782.1| cytidine and deoxycytidylate deaminase zinc-binding region [Aerococcus urinae ACS-120-V-Col10a] gi|326651114|gb|AEA01297.1| cytidine and deoxycytidylate deaminase zinc-binding region [Aerococcus urinae ACS-120-V-Col10a] Length = 162 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 90/148 (60%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K + FM A+++A+ A +E+P+GAVAV ++I R N + +D T HAE+ AIR Sbjct: 3 DKADYFMQAAIDQAKKAQDLDEVPIGAVAVYRGQVIGRGYNLREQSQDATDHAEMQAIRQ 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L+ L +VDLYVTLEPC+MC+ AI L+RIR LY+GAS+PK G + Sbjct: 63 ANRYLNNWRLNDVDLYVTLEPCSMCSGAIVLSRIRCLYFGASDPKAGTCGSLMNLVQDPR 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + Q+++ FFK+ R Sbjct: 123 LNHQVDLVSGLRGEECSQLLKSFFKDLR 150 >gi|307132102|ref|YP_003884118.1| tRNA-specific adenosine-34 deaminase [Dickeya dadantii 3937] gi|306529631|gb|ADM99561.1| tRNA-specific adenosine-34 deaminase [Dickeya dadantii 3937] Length = 167 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 76/147 (51%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL AQ A E+PVGAV V +KII NR D TAHAEI+A++ G Sbjct: 6 DDEFWMRHALTLAQRAWDAGEVPVGAVLVRGDKIIGEGWNRPISRNDPTAHAEIMALQQG 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + LY+TLEPC MCA A+ +RI RL YGA++ K G + Sbjct: 66 GQALQNYRLLDTTLYITLEPCVMCAGAMIHSRINRLVYGAADAKTGAAGSLVDILRHPGM 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ +++ FF+ RR Sbjct: 126 NHHIVITDGVLADECSELLSRFFRMRR 152 >gi|16801927|ref|NP_472195.1| hypothetical protein lin2867 [Listeria innocua Clip11262] gi|16415402|emb|CAC98093.1| lin2867 [Listeria innocua Clip11262] Length = 154 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 87/149 (58%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI Sbjct: 1 MEQD-FFMQQALEEAKKAREIGEVPIGAVVVLDGEIIGRAHNLRETTQNAVTHAELLAIE 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + Sbjct: 60 DACKHQNSWRLSGAELYVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDD 119 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ ++ G+ E S +++ FF+E R Sbjct: 120 RFNHTCKVEAGLLEAESSAMLKSFFRELR 148 >gi|319648541|ref|ZP_08002756.1| YaaJ protein [Bacillus sp. BT1B_CT2] gi|317389389|gb|EFV70201.1| YaaJ protein [Bacillus sp. BT1B_CT2] Length = 160 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ EA+ A + E+P+GAV VL+ +II+RA N + AHAE+L I Sbjct: 1 MTQDEFYMKEAVNEARKAEEKGEVPIGAVLVLDGEIIARAHNLRETEQRSVAHAEMLVIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR L L LYVTLEPC MCA A L+RI ++ +GAS+PKGG Sbjct: 61 EACRKLGTWRLERAVLYVTLEPCPMCAGAAVLSRIDKVVFGASDPKGGCAGTLMNLLQEE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ +++ DFF++ R Sbjct: 121 RFNHQAEVVSGVMEEECGRMLSDFFRKLR 149 >gi|197302614|ref|ZP_03167668.1| hypothetical protein RUMLAC_01343 [Ruminococcus lactaris ATCC 29176] gi|197298196|gb|EDY32742.1| hypothetical protein RUMLAC_01343 [Ruminococcus lactaris ATCC 29176] Length = 180 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 76/147 (51%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL++A+ A E P+G V V KII+R NR K AHAEI AI+ Sbjct: 21 RDEKYMKEALKQAKKAYALEETPIGCVIVHEGKIIARGYNRRNTDKSPLAHAEISAIKKA 80 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L E LYVTLEPC MCA AI +RI R+ G NPK G + + Sbjct: 81 SKKLGDWRLEECTLYVTLEPCQMCAGAIIQSRIPRVVVGCMNPKAGCAGSVLNLLDVQAF 140 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ + E+ +++ FF+E R Sbjct: 141 NHQAEVKTKVLEEECSLMMKQFFRELR 167 >gi|154505232|ref|ZP_02041970.1| hypothetical protein RUMGNA_02745 [Ruminococcus gnavus ATCC 29149] gi|153794430|gb|EDN76850.1| hypothetical protein RUMGNA_02745 [Ruminococcus gnavus ATCC 29149] Length = 179 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ +A+ A E+P+G V V +KII R NR K+ AHAE+ AIR Sbjct: 20 MNQDEKYMREAIRQAKKAYALEEVPIGCVIVYQDKIIGRGYNRRTVDKNTLAHAELQAIR 79 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L + +YVTLEPC MC+ AI ARI+R+ G NPK G + + Sbjct: 80 KASKKMDDWRLEDCTMYVTLEPCQMCSGAIVQARIKRVVVGCMNPKAGCAGSILNLLDMK 139 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E++ +++ FFKE R Sbjct: 140 EFNHQVELTTGVLEEQCSGMMKQFFKELR 168 >gi|293400048|ref|ZP_06644194.1| cytidine/deoxycytidylate deaminase family protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306448|gb|EFE47691.1| cytidine/deoxycytidylate deaminase family protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 157 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 59/146 (40%), Positives = 87/146 (59%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM A++EA+ A +E+P+G V V NKII+RA N + AHAEILAI C Sbjct: 2 HENFMLEAIKEAEKAFAIDEVPIGCVIVYQNKIIARAHNLRESKQSAIAHAEILAIEKAC 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 I+ L + LYVTLEPC MC+ AI +R++ + +GA +PKGG I++ + Y + Sbjct: 62 NIIGSWRLEDCTLYVTLEPCPMCSGAIIQSRMKTVVFGAYDPKGGCIKSCMKMYETPGFN 121 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H PE GI E+ +++ FF+++R Sbjct: 122 HYPETIGGILEEECGALLKQFFRQKR 147 >gi|264677875|ref|YP_003277782.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] gi|262208388|gb|ACY32486.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] Length = 457 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 55/146 (37%), Positives = 81/146 (55%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM ALE+A+ AA E+PVGAV V + ++I R N +D TAHAE+LA+R Sbjct: 8 HEHFMRQALEQARRAAACGEVPVGAVVVKDGQVIGRGHNSPLSAQDPTAHAEVLALREAA 67 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R L L LYVTLEPCTMC+ A+ AR+ + YGA+ P+ G + + + Sbjct: 68 RTLGNYRLEGCTLYVTLEPCTMCSGAMLHARVDAVVYGAAEPRTGAAGSVLDVFGYPAIN 127 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ + ++ +FF++RR Sbjct: 128 HQTRVLRGVLAAQCSALMAEFFQQRR 153 >gi|52145192|ref|YP_081636.1| cytidine/deoxycytidylate deaminase family protein [Bacillus cereus E33L] gi|51978661|gb|AAU20211.1| probable cytidine/deoxycytidylate deaminase family protein [Bacillus cereus E33L] Length = 166 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 86/151 (56%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VLN ++IS A N + AHAE+LA Sbjct: 1 MERDQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISAAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGA +PKGG T Sbjct: 61 IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGAGDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 DERFNHQCEVVDGVLEEECGTLLTNFFRELR 151 >gi|317499420|ref|ZP_07957687.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lachnospiraceae bacterium 5_1_63FAA] gi|316893292|gb|EFV15507.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lachnospiraceae bacterium 5_1_63FAA] Length = 161 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 89/149 (59%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+++A+ AA+ ++P+G V V ++KII+RA N+ + K AHAE+LAI+ Sbjct: 1 MTQEEKYMKEAIKQAKKAAVIGDVPIGCVIVEDDKIIARAYNQRNKKKTTLAHAELLAIQ 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + ++ L + +Y+TLEPC MCA AI ARI ++ GA NPK G + + Sbjct: 61 KASKKVNDWRLEDCTMYITLEPCQMCAGAIVQARIPKVVIGAMNPKAGCAGSVLNILQID 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI E+ Q++ DFFKE R Sbjct: 121 KFNHQVEIERGILEEECSQMLSDFFKELR 149 >gi|169825638|ref|YP_001695796.1| hypothetical protein Bsph_0024 [Lysinibacillus sphaericus C3-41] gi|168990126|gb|ACA37666.1| Hypothetical yaaJ protein [Lysinibacillus sphaericus C3-41] Length = 170 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 87/148 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +FM ALEEA+ AA+ E+P+GAV V + +II+RA N ++ T HAE++ I+ Sbjct: 5 ETDRLFMKQALEEAKKAAILGEVPIGAVLVYDGEIIARAHNLRETTQNATTHAELMVIQE 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C+ + L + LYVTLEPC MCA AI +R+ R+ YGA + K G +++ + A Sbjct: 65 ACQKIGSWRLEKTTLYVTLEPCPMCAGAILQSRVPRVVYGARDIKAGCVDSLYRILNDAR 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI QI+ DFF+ R Sbjct: 125 FNHECEVSEGILADECGQILTDFFRALR 152 >gi|325662866|ref|ZP_08151435.1| hypothetical protein HMPREF0490_02175 [Lachnospiraceae bacterium 4_1_37FAA] gi|325470918|gb|EGC74147.1| hypothetical protein HMPREF0490_02175 [Lachnospiraceae bacterium 4_1_37FAA] Length = 163 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ +A+ A E+P+G V V +KII+R NR K+ AHAE++AIR Sbjct: 1 MNQDEKYMKEAIRQAKKAYALKEVPIGCVIVYQDKIIARGYNRRTIDKNTLAHAELIAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + +YVTLEPC MC+ AI +R++++ G NPK G + + Sbjct: 61 KASRKMDDWRLEDCTMYVTLEPCQMCSGAIVQSRMKKVVVGCMNPKAGCAGSIFNLLQVP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ Q+++ FF+E R Sbjct: 121 QFNHQVELEIGVLEEECSQLMKSFFRELR 149 >gi|167766023|ref|ZP_02438076.1| hypothetical protein CLOSS21_00515 [Clostridium sp. SS2/1] gi|167712103|gb|EDS22682.1| hypothetical protein CLOSS21_00515 [Clostridium sp. SS2/1] Length = 161 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 89/149 (59%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+++A+ AA+ ++P+G V V ++KII+RA N+ + K AHAE+LAI+ Sbjct: 1 MTQEEKYMKEAIKQAKKAAVIGDVPIGCVIVEDDKIIARAYNQRNKKKTTLAHAELLAIQ 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + ++ L + +Y+TLEPC MCA AI ARI ++ GA NPK G + + Sbjct: 61 KASKKVNDWRLEDCTMYITLEPCQMCAGAIVQARIPKVVIGAMNPKAGCAGSVLNILQID 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI E+ Q++ DFFKE R Sbjct: 121 KFNHQVEIERGILEEECSQMLSDFFKELR 149 >gi|150387879|ref|YP_001317928.1| CMP/dCMP deaminase, zinc-binding [Alkaliphilus metalliredigens QYMF] gi|149947741|gb|ABR46269.1| CMP/dCMP deaminase, zinc-binding [Alkaliphilus metalliredigens QYMF] Length = 151 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 61/144 (42%), Positives = 81/144 (56%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +MS ALEEA+ A E+P+GA+ + NK+I+ A N D TAHAEI+AI+ CR Sbjct: 4 YYMSLALEEAKKAYELGEVPIGAIILRENKVIAAAHNLRESHHDATAHAEIIAIQAACRR 63 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L L+VT+EPC MCA AI +RI R+ GA +PK G + +H Sbjct: 64 LGGWRLTNSTLFVTIEPCPMCAGAILQSRIDRVVIGAMDPKAGACGSIINLLNNNQFNHQ 123 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 EI G+ E QI++DFFK R Sbjct: 124 TEIVTGVLEDECSQIMKDFFKSLR 147 >gi|260584497|ref|ZP_05852244.1| cytidine/deoxycytidylate deaminase [Granulicatella elegans ATCC 700633] gi|260158015|gb|EEW93084.1| cytidine/deoxycytidylate deaminase [Granulicatella elegans ATCC 700633] Length = 170 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 90/148 (60%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K+ +FM AL+EAQ A + E+P+GAV VLN +II R N + +D T HAEI AIR Sbjct: 7 KEKEMFMREALKEAQKAYDKEEVPIGAVVVLNGEIIGRGHNLREKEQDATLHAEIKAIRQ 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 ++L L + +L+VTLEPC MC+ A+ L+R++++ +GA +PK G Sbjct: 67 ANQVLGSWRLEDCELFVTLEPCPMCSGAMILSRLKKVTFGAFDPKAGTAGTFMNLLQDER 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ +QI++DFFK R Sbjct: 127 FNHQVEVEHGVLEEECQQILKDFFKGLR 154 >gi|329902676|ref|ZP_08273230.1| tRNA-specific adenosine-34 deaminase [Oxalobacteraceae bacterium IMCC9480] gi|327548648|gb|EGF33298.1| tRNA-specific adenosine-34 deaminase [Oxalobacteraceae bacterium IMCC9480] Length = 161 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 87/147 (59%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +VFM A+++A NA E+PVGAV V + ++I+ N++ D TAHAEI+A+R G Sbjct: 2 DDSVFMRLAMDQAHNAWALGEVPVGAVLVKDGQVIATGFNQSIGTHDPTAHAEIMALRAG 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L LP +LYVTLEPC MCA A+ AR+ R+ YGAS+PK G + + A Sbjct: 62 ASLLGNYRLPGCELYVTLEPCAMCAGAMMHARLARVVYGASDPKTGCCGSVLDLFGQAQL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ +++DFF ERR Sbjct: 122 NHHTGLVGGVLADACSALLKDFFAERR 148 >gi|324324011|gb|ADY19271.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 166 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 60/151 (39%), Positives = 86/151 (56%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LA Sbjct: 1 MERDQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+ R Sbjct: 121 DERFNHQCEVVAGVLEEECGTLLTNFFRALR 151 >gi|322383121|ref|ZP_08056948.1| tRNA specific adenosine deaminase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152783|gb|EFX45409.1| tRNA specific adenosine deaminase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 157 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 74/148 (50%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A+ EA A +E+P+GAV V +II R N D TAHAE++AIR Sbjct: 7 EEHEQWMQEAISEALKAETIHEVPIGAVIVHEGRIIGRGHNLRETSMDPTAHAEMIAIRE 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L LYVTLEPC MCA AI +RI R+ YG +PK G Sbjct: 67 ASEYLRAWRLLNCTLYVTLEPCPMCAGAIVQSRILRVVYGTIDPKAGCAGTLMNLLQEDR 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI + ++ FF++ R Sbjct: 127 FNHRVEVINGILREECSSLLTSFFRKLR 154 >gi|52783876|ref|YP_089705.1| YaaJ [Bacillus licheniformis ATCC 14580] gi|52346378|gb|AAU39012.1| YaaJ [Bacillus licheniformis ATCC 14580] Length = 162 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ EA+ A + E+P+GAV VL+ +II+RA N + AHAE+L I Sbjct: 3 MTQDEFYMKEAVNEARKAEEKGEVPIGAVLVLDGEIIARAHNLRETEQRSVAHAEMLVIE 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR L L LYVTLEPC MCA A L+RI ++ +GAS+PKGG Sbjct: 63 EACRKLGTWRLERAVLYVTLEPCPMCAGAAVLSRIDKVVFGASDPKGGCAGTLMNLLQEE 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ +++ DFF++ R Sbjct: 123 RFNHQAEVVSGVMEEECGRMLSDFFRKLR 151 >gi|153853556|ref|ZP_01994936.1| hypothetical protein DORLON_00926 [Dorea longicatena DSM 13814] gi|149753711|gb|EDM63642.1| hypothetical protein DORLON_00926 [Dorea longicatena DSM 13814] Length = 169 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A+++A+ A E+P+G V V +KII R NR + AHAE++AI+ Sbjct: 5 STDEKYMKEAIKQAKKAYAIGEVPIGCVIVYQDKIIGRGYNRRTIDNNTLAHAELIAIKK 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + ++ L + +YVTLEPC MC+ AI +R+ R+ G NPK G + + Sbjct: 65 ASKKMNDWRLEDCTMYVTLEPCQMCSGAIVQSRMTRVVVGCMNPKAGCAGSILNLLDIPE 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ Q+++ FFKE R Sbjct: 125 FNHQVELTTGVMEEECSQMMKSFFKELR 152 >gi|229170871|ref|ZP_04298476.1| hypothetical protein bcere0006_110 [Bacillus cereus MM3] gi|228612606|gb|EEK69823.1| hypothetical protein bcere0006_110 [Bacillus cereus MM3] Length = 166 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 85/148 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LA+ Sbjct: 4 DQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLALDE 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 64 ACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDER 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 124 FNHQCEVVAGVLEEECGTLLTNFFRELR 151 >gi|317493152|ref|ZP_07951575.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918812|gb|EFV40148.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 170 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 83/147 (56%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL AQ A + E+PVGA+ VL++++I + NR D TAHAEI+A++ G Sbjct: 5 NDAYWMKQALALAQKAWEQGEVPVGAILVLDDEVIGQGWNRPITRHDPTAHAEIMALQQG 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +I+ L LYVTLEPC MCA A+ +RI+RL YGAS+ K G + Sbjct: 65 GQIVQNYRLLNATLYVTLEPCVMCAGAMVHSRIKRLVYGASDLKTGAAGSLLDVLRHPGM 124 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ +++ FF++RR Sbjct: 125 NHQIEITAGVMANECSEMLSQFFQQRR 151 >gi|157691308|ref|YP_001485770.1| nucleoside deaminase [Bacillus pumilus SAFR-032] gi|157680066|gb|ABV61210.1| possible nucleoside deaminase [Bacillus pumilus SAFR-032] Length = 158 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM A+ EA A E+P+GA+ V++++I+SRA N + AHAE+LAI Sbjct: 1 MTRDEQFMQEAISEALKAEQIGEVPIGAIIVVDDQIVSRAHNLRETEQRSIAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L + LYVTLEPC MCA AI L+R++++ +GA +PKGG Sbjct: 61 EACKTTESWRLEDAVLYVTLEPCPMCAGAIVLSRVKKVVFGAYDPKGGCAGTLMNLLDDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E +++ FF+ R Sbjct: 121 RFNHQSEVIGGVLENECGELLSQFFRNLR 149 >gi|229917437|ref|YP_002886083.1| CMP/dCMP deaminase zinc-binding [Exiguobacterium sp. AT1b] gi|229468866|gb|ACQ70638.1| CMP/dCMP deaminase zinc-binding [Exiguobacterium sp. AT1b] Length = 166 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ FM A+EEA+ A E+P+G V V +++I+ NR + AHAE++AI Sbjct: 1 MERDERFMQLAIEEAKKAEAIGEVPIGCVIVKGDQVIATGHNRRETDRLAAAHAEMIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L + +LYVTLEPC MCA AI L+R++R+ +GA +PKGG Sbjct: 61 TANETLGNWRLEDCELYVTLEPCPMCAGAIVLSRVKRVIFGAHDPKGGCCGTLMNLVQDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ + + Q++ DFF+ R Sbjct: 121 RFNHQAEVTENVLAEECGQLLTDFFRALR 149 >gi|266621805|ref|ZP_06114740.1| tRNA-specific adenosine deaminase [Clostridium hathewayi DSM 13479] gi|288866494|gb|EFC98792.1| tRNA-specific adenosine deaminase [Clostridium hathewayi DSM 13479] Length = 165 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+ +A+ A E+P+G V V +KII+R NR K+V +HAEI+AI+ Sbjct: 1 MNADEKYMRAAIGQARKAGAIGEVPIGCVIVYEDKIIARGYNRRTIDKNVLSHAEIIAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ + L +YVTLEPC MCA AI ARI ++ G NPK G + Sbjct: 61 KACKKIGDWRLEGCTMYVTLEPCPMCAGAIVQARIPKVVIGCMNPKAGCAGSVLDLLHED 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ +++++FFK R Sbjct: 121 GFNHQVEMEKGVLEEECSRLMKEFFKALR 149 >gi|30260212|ref|NP_842589.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Bacillus anthracis str. Ames] gi|47525273|ref|YP_016622.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49183056|ref|YP_026308.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Bacillus anthracis str. Sterne] gi|49481561|ref|YP_034377.1| cytidine/deoxycytidylate deaminase family protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65317484|ref|ZP_00390443.1| COG0590: Cytosine/adenosine deaminases [Bacillus anthracis str. A2012] gi|118475795|ref|YP_892946.1| tRNA-adenosine deaminase [Bacillus thuringiensis str. Al Hakam] gi|165873229|ref|ZP_02217840.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0488] gi|167635069|ref|ZP_02393386.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0442] gi|167642053|ref|ZP_02400280.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0193] gi|170688894|ref|ZP_02880096.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0465] gi|170707544|ref|ZP_02897997.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0389] gi|177655687|ref|ZP_02937012.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0174] gi|190569336|ref|ZP_03022228.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis Tsiankovskii-I] gi|196036359|ref|ZP_03103756.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus W] gi|196041943|ref|ZP_03109230.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus NVH0597-99] gi|196047685|ref|ZP_03114889.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus 03BB108] gi|218901223|ref|YP_002449057.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus AH820] gi|225862074|ref|YP_002747452.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus 03BB102] gi|227812695|ref|YP_002812704.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. CDC 684] gi|228912760|ref|ZP_04076409.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228925275|ref|ZP_04088373.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228931524|ref|ZP_04094432.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228943828|ref|ZP_04106215.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229089154|ref|ZP_04220437.1| Uncharacterized deaminase yaaJ [Bacillus cereus Rock3-42] gi|229119684|ref|ZP_04248947.1| Uncharacterized deaminase yaaJ [Bacillus cereus 95/8201] gi|229182416|ref|ZP_04309669.1| Uncharacterized deaminase yaaJ [Bacillus cereus BGSC 6E1] gi|229604522|ref|YP_002864673.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0248] gi|254686610|ref|ZP_05150469.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. CNEVA-9066] gi|254724163|ref|ZP_05185948.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A1055] gi|254737002|ref|ZP_05194707.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. Western North America USA6153] gi|254744200|ref|ZP_05201881.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. Kruger B] gi|254751191|ref|ZP_05203230.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. Vollum] gi|254761661|ref|ZP_05213679.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. Australia 94] gi|30253533|gb|AAP24075.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. Ames] gi|47500421|gb|AAT29097.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49176983|gb|AAT52359.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. Sterne] gi|49333117|gb|AAT63763.1| probable cytidine/deoxycytidylate deaminase family protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118415020|gb|ABK83439.1| tRNA-adenosine deaminase [Bacillus thuringiensis str. Al Hakam] gi|164711027|gb|EDR16593.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0488] gi|167509987|gb|EDR85406.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0193] gi|167529543|gb|EDR92293.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0442] gi|170127540|gb|EDS96414.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0389] gi|170667118|gb|EDT17879.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0465] gi|172080027|gb|EDT65127.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0174] gi|190559558|gb|EDV13551.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis Tsiankovskii-I] gi|195990989|gb|EDX54960.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus W] gi|196021470|gb|EDX60173.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus 03BB108] gi|196027198|gb|EDX65818.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus NVH0597-99] gi|218537868|gb|ACK90266.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus AH820] gi|225787894|gb|ACO28111.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus 03BB102] gi|227005774|gb|ACP15517.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. CDC 684] gi|228601062|gb|EEK58629.1| Uncharacterized deaminase yaaJ [Bacillus cereus BGSC 6E1] gi|228663775|gb|EEL19352.1| Uncharacterized deaminase yaaJ [Bacillus cereus 95/8201] gi|228694177|gb|EEL47857.1| Uncharacterized deaminase yaaJ [Bacillus cereus Rock3-42] gi|228815852|gb|EEM62086.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228828142|gb|EEM73868.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228834389|gb|EEM79928.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228846887|gb|EEM91890.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229268930|gb|ACQ50567.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus anthracis str. A0248] Length = 166 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 86/151 (56%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VLN ++IS A N + AHAE+LA Sbjct: 1 MERDQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISAAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGA +PKGG T Sbjct: 61 IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGAGDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 DERFNHQCEVVAGVLEEECGTLLTNFFRELR 151 >gi|311278508|ref|YP_003940739.1| CMP/dCMP deaminase zinc-binding protein [Enterobacter cloacae SCF1] gi|308747703|gb|ADO47455.1| CMP/dCMP deaminase zinc-binding protein [Enterobacter cloacae SCF1] Length = 165 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 76/147 (51%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL AQ A E+PVGAV V N++I NR D TAHAEI+A+R G Sbjct: 7 NHEYWMRHALGLAQRAWDEGEVPVGAVLVYQNQVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 67 GLVLQNYRLIDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ DFF+ RR Sbjct: 127 NHRVEVTEGVLAGECSAMLSDFFRARR 153 >gi|42779100|ref|NP_976347.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Bacillus cereus ATCC 10987] gi|42735015|gb|AAS38955.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus cereus ATCC 10987] Length = 166 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 86/151 (56%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VLN ++IS A N + AHAE+LA Sbjct: 1 MERDQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+ R Sbjct: 121 DERFNHQCEVVAGVLEEECGTLLTNFFRALR 151 >gi|302384616|ref|YP_003820438.1| CMP/dCMP deaminase zinc-binding protein [Clostridium saccharolyticum WM1] gi|302195244|gb|ADL02815.1| CMP/dCMP deaminase zinc-binding protein [Clostridium saccharolyticum WM1] Length = 164 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 77/149 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+ +A+ A E+P+G V V +KII+R NR K+V +HAEI AIR Sbjct: 1 MTIDEKYMRAAIRQAEKAGAMGEVPIGCVIVYEDKIIARGYNRRTIDKNVLSHAEINAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR + L +YVTLEPC MCA AI ARI ++ G N K G + + Sbjct: 61 KACRKVGDWRLEGCTMYVTLEPCPMCAGAIVQARIPKVIMGCMNAKAGCAGSVLDLFHQD 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E G+ ++++DFFK R Sbjct: 121 GLNHQVETESGVLGDECSRLMKDFFKALR 149 >gi|282918346|ref|ZP_06326083.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus C427] gi|282317480|gb|EFB47852.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus C427] Length = 156 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM+ A+EEA+ AA E+P+GA+ ++++I+RA N L+ TAHAE +AI Sbjct: 1 MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARANNLRETLQQPTAHAEHIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L + LYVTLEPC MCA I ++RI R+ YGA +PKGG + + Sbjct: 61 RAAKVLGSWRLEDCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQS 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ ++ FFK R Sbjct: 121 NFNHRAIVDKGVLKEACSTLLTTFFKNLR 149 >gi|225181888|ref|ZP_03735323.1| CMP/dCMP deaminase zinc-binding [Dethiobacter alkaliphilus AHT 1] gi|225167402|gb|EEG76218.1| CMP/dCMP deaminase zinc-binding [Dethiobacter alkaliphilus AHT 1] Length = 158 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 61/147 (41%), Positives = 82/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL+EAQ A + EIP+GAV V + II+R NR EL D TAHAEIL +R Sbjct: 2 TDQDFMREALKEAQLAFEKGEIPIGAVLVRDGNIIARDHNRREELDDPTAHAEILVLREA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L LP LYVT+EPC MCA + AR+ R+ YGA++ K G + + Sbjct: 62 GRTLGGWRLPNTTLYVTIEPCPMCAGGLVQARVARVVYGAADIKAGAVHSLYTVTEDERL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + I++ FF+ RR Sbjct: 122 NHRLEVTGGVLAEECADIMRTFFRSRR 148 >gi|297582358|ref|YP_003698138.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens MLS10] gi|297140815|gb|ADH97572.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens MLS10] Length = 174 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K +M AL EA A E+P+GAV V ++ II+R N + T HAE++AI Sbjct: 8 KDEAYMKEALTEADKAEAIGEVPIGAVIVKDDIIIARGYNERETKQRATGHAELVAIEEA 67 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 CRIL L LYVTLEPC MCA AI +RI R+ YGA +PKGG Sbjct: 68 CRILKTWRLEGCTLYVTLEPCPMCAGAIVQSRIDRVVYGADDPKGGSCGTVVNLLDEPKF 127 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+P + G ++ + + FF+ R Sbjct: 128 NHAPLVTSGTLKEEAADRLSSFFRALR 154 >gi|172056061|ref|YP_001812521.1| CMP/dCMP deaminase zinc-binding [Exiguobacterium sibiricum 255-15] gi|171988582|gb|ACB59504.1| CMP/dCMP deaminase zinc-binding [Exiguobacterium sibiricum 255-15] Length = 169 Score = 226 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ +M A+EEA+ A E+P+G V V +++I+ N TAHAE+LAI Sbjct: 2 MERHEHYMRLAIEEAKKAKAIGEVPIGCVIVKGDEVIATGYNHRETNHQATAHAELLAIE 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C L+ L +LYVTLEPC MCA AI L+RI + +GA +PKGG Sbjct: 62 EACNKLANWRLEGCELYVTLEPCPMCAGAIMLSRIEHVIFGAVDPKGGCCGTLMNLVQDE 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ EQ +++ FF+E R Sbjct: 122 RFNHVSQLTGGVLEQECGEMLTSFFRELR 150 >gi|229027869|ref|ZP_04184026.1| Uncharacterized deaminase yaaJ [Bacillus cereus AH1271] gi|228733445|gb|EEL84270.1| Uncharacterized deaminase yaaJ [Bacillus cereus AH1271] Length = 166 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 61/148 (41%), Positives = 85/148 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A+EEA+ A E+P+GAV VLN ++IS A N + AHAE+LAI Sbjct: 4 DQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISVAHNLRETEQRSIAHAELLAIDE 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 64 ACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDER 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 124 FNHQCEVVAGVLEKECGTLLTNFFRELR 151 >gi|125974987|ref|YP_001038897.1| tRNA-adenosine deaminase [Clostridium thermocellum ATCC 27405] gi|256003803|ref|ZP_05428790.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum DSM 2360] gi|281418595|ref|ZP_06249614.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum JW20] gi|125715212|gb|ABN53704.1| tRNA-adenosine deaminase [Clostridium thermocellum ATCC 27405] gi|255992141|gb|EEU02236.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum DSM 2360] gi|281407679|gb|EFB37938.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum JW20] gi|316939149|gb|ADU73183.1| CMP/dCMP deaminase zinc-binding protein [Clostridium thermocellum DSM 1313] Length = 161 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 61/147 (41%), Positives = 84/147 (57%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM AL+EA A +NE P+GAV V + II+R N+ D T HAE+ IR Sbjct: 7 SHHWFMREALKEAYKAYGKNETPIGAVMVKDGSIIARGHNQKELTNDPTNHAEMAVIREA 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C L L + DLYVTLEPCTMCA AI AR+ RL+ G+ +PK G + + Sbjct: 67 CAKLGTWRLNDCDLYVTLEPCTMCAGAIIQARVGRLFIGSLDPKAGAAGSVIDVLKVDAF 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI ++ +I+++FFKE R Sbjct: 127 NHRVEVTYGILQEECSEILKNFFKELR 153 >gi|291618438|ref|YP_003521180.1| TadA [Pantoea ananatis LMG 20103] gi|291153468|gb|ADD78052.1| TadA [Pantoea ananatis LMG 20103] Length = 171 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL AQ A + E+PVGAV V +++I NR D TAHAEI+A+R Sbjct: 11 EQDEYWMRRALTLAQRAWEQGEVPVGAVLVQGDRVIGEGWNRPIGQHDPTAHAEIMALRQ 70 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G ++L L LYVTLEPC MCA A+ +RI RL YGA + K G + Sbjct: 71 GGKVLENYRLLNTTLYVTLEPCIMCAGAMVHSRIGRLVYGAHDVKTGAAGSLIDILGHPG 130 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E+ ++ DFF+ RR Sbjct: 131 MNHQVALHQGVLEEECAAMLSDFFRMRR 158 >gi|332754092|gb|EGJ84463.1| tRNA-specific adenosine deaminase [Shigella flexneri 4343-70] Length = 178 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 18 SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G + + Sbjct: 78 GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAVGSLMDVLHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI ++ DFF+ RR Sbjct: 138 NHRVEITEGILADECAALLSDFFRMRR 164 >gi|20806575|ref|NP_621746.1| cytosine/adenosine deaminase [Thermoanaerobacter tengcongensis MB4] gi|20515016|gb|AAM23350.1| Cytosine/adenosine deaminases [Thermoanaerobacter tengcongensis MB4] Length = 148 Score = 226 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 64/145 (44%), Positives = 87/145 (60%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM AL+EA+ + E+PVGAV V + +II+R N+ KD TAHAEI+AIR CR Sbjct: 3 NKFMEEALKEAKKSYELGEVPVGAVIVKDGEIIARGHNQKESSKDATAHAEIIAIREACR 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + LYVTLEPC MCA AI ARI+R+Y G +PK G + Sbjct: 63 RLGSWRLEDCSLYVTLEPCPMCAGAIVEARIKRVYIGTESPKEGAAGSVINILNNKELGT 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 S E+Y GI E+ ++++++ FF+ R Sbjct: 123 STEVYFGIMEEEAKELLKKFFENLR 147 >gi|257062766|ref|YP_003142438.1| tRNA-adenosine deaminase [Slackia heliotrinireducens DSM 20476] gi|256790419|gb|ACV21089.1| tRNA-adenosine deaminase [Slackia heliotrinireducens DSM 20476] Length = 172 Score = 226 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ FM A+E+A A L E+P+GAV V +II+ N +D +AHAE AI Sbjct: 13 LEDDERFMRAAIEQAHLAELDGEVPIGAVVVCQGEIIAEGRNHRETDQDPSAHAEFSAIM 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R L + LP+ +YVTLEPC MC+ + ARI R YGA +PK G + Q + Sbjct: 73 QASRELERWRLPDCTVYVTLEPCIMCSGLMHQARIGRCVYGAPDPKAGALGTLYQVHADE 132 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ E+ G+ + ++++DFF +R Sbjct: 133 RLNHTFEVTSGVLQDECARLLKDFFARKR 161 >gi|260598940|ref|YP_003211511.1| tRNA-specific adenosine deaminase [Cronobacter turicensis z3032] gi|260218117|emb|CBA32906.1| tRNA-specific adenosine deaminase [Cronobacter turicensis z3032] Length = 196 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 76/147 (51%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL AQ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 30 THEYWMRHALTLAQRAWDEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 89 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ RI L +GA + K G + + Sbjct: 90 GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHGRIGTLVFGARDAKTGAVGSLMDITGHPGM 149 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ GI ++ FF++RR Sbjct: 150 NHQVQVIEGILATECSAMLSAFFRQRR 176 >gi|309775004|ref|ZP_07670019.1| cytidine/deoxycytidylate deaminase family protein [Erysipelotrichaceae bacterium 3_1_53] gi|308917222|gb|EFP62947.1| cytidine/deoxycytidylate deaminase family protein [Erysipelotrichaceae bacterium 3_1_53] Length = 162 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 62/149 (41%), Positives = 95/149 (63%), Gaps = 2/149 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK+ +M A++EA A +++E+P+G V V ++KII+R N + HAEI+AI+ Sbjct: 12 MKED--YMRAAIKEAVKANMKDEVPIGCVIVKDDKIIARGHNLRESKQQSINHAEIIAIQ 69 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ + L + DLYVTLEPC MCA AI +RIR + YGAS+PKGG I++ Y Sbjct: 70 KACKKIGSWRLEDCDLYVTLEPCCMCAGAILQSRIRTVIYGASDPKGGSIDSTMHMYEQP 129 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P +Y G+ ++ Q++++FFKE+R Sbjct: 130 GFNHYPCVYSGVLQEECSQLLKNFFKEKR 158 >gi|319891528|ref|YP_004148403.1| tRNA-specific adenosine-34 deaminase [Staphylococcus pseudintermedius HKU10-03] gi|317161224|gb|ADV04767.1| tRNA-specific adenosine-34 deaminase [Staphylococcus pseudintermedius HKU10-03] Length = 157 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +MS ALEEA+ AA + E+P+GAV V N KII+RA N + TAHAE LA+ Sbjct: 1 MTSHQYYMSIALEEAKKAAKKGEVPIGAVVVKNGKIIARAHNLRETDQSPTAHAEHLAME 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L LYVTLEPC MCA I ++R+ + +GA +PKGG + + + Sbjct: 61 RAAAQLGTWRLEGCTLYVTLEPCVMCAGTIVMSRVDTVVFGAMDPKGGCVGSLMNLVQDS 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ +I++ FF+ R Sbjct: 121 RMNHRASVVSGVLAYSCGEILRQFFRALR 149 >gi|313900948|ref|ZP_07834438.1| cytidine and deoxycytidylate deaminase zinc-binding region [Clostridium sp. HGF2] gi|312954368|gb|EFR36046.1| cytidine and deoxycytidylate deaminase zinc-binding region [Clostridium sp. HGF2] Length = 151 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 90/149 (60%), Gaps = 2/149 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK +M AL EA+ A +E+P+G V V ++KII+R N + HAEI+AI+ Sbjct: 1 MK--EEYMRAALREAEKAKKIDEVPIGCVIVKDDKIIARGHNLRETKQQSINHAEIIAIQ 58 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ + L + DLYVTLEPC MCA AI +RIR + YG ++PKGG IE+ Y Sbjct: 59 KACKKVGSWRLEDCDLYVTLEPCCMCAGAILQSRIRTVIYGTADPKGGSIESTLHMYEQP 118 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P++ G+ + Q++++FFKE+R Sbjct: 119 GYNHYPKVESGVLQNECSQLLKNFFKEKR 147 >gi|331086590|ref|ZP_08335668.1| hypothetical protein HMPREF0987_01971 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330410423|gb|EGG89855.1| hypothetical protein HMPREF0987_01971 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 163 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ +A+ A E+P+G V V +KII+R NR K+ AHAE++AI+ Sbjct: 1 MNQDEKYMKEAIRQAKKAYALKEVPIGCVIVYQDKIIARGYNRRTIDKNTLAHAELIAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + +YVTLEPC MC+ AI +R++++ G NPK G + + Sbjct: 61 KASRKMDDWRLEDCTMYVTLEPCQMCSGAIVQSRMKKVVVGCMNPKAGCAGSIFNLLQVP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ Q+++ FF+E R Sbjct: 121 QFNHQVELEIGVLEEECSQLMKSFFRELR 149 >gi|90108580|pdb|1Z3A|A Chain A, Crystal Structure Of Trna Adenosine Deaminase Tada From Escherichia Coli gi|90108581|pdb|1Z3A|B Chain B, Crystal Structure Of Trna Adenosine Deaminase Tada From Escherichia Coli Length = 168 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 8 SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 67 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 68 GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 127 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI ++ DFF+ RR Sbjct: 128 NHRVEITEGILADECAALLSDFFRMRR 154 >gi|283778333|ref|YP_003369088.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM 6068] gi|283436786|gb|ADB15228.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM 6068] Length = 155 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 84/147 (57%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL EA A +E+PVGAV V + ++I+ A N+ L D TAHAE++AI Sbjct: 4 THDYYMQLALNEASAAFDEDEVPVGAVIVHSGRVIAAAHNQREALHDPTAHAEMIAITQA 63 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L LYVTLEPC MC+ AI AR+ + YGA++PK G + + T Sbjct: 64 AESMGDWRLEGCTLYVTLEPCIMCSGAILQARVPTVVYGATDPKAGAVGSLFHLLTDERL 123 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ PGI + S +I+ FF+++R Sbjct: 124 NHRCQVVPGILAKPSGEILTRFFQQQR 150 >gi|251788710|ref|YP_003003431.1| CMP/dCMP deaminase zinc-binding [Dickeya zeae Ech1591] gi|247537331|gb|ACT05952.1| CMP/dCMP deaminase zinc-binding [Dickeya zeae Ech1591] Length = 168 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 54/147 (36%), Positives = 74/147 (50%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL AQ A E+PVGAV V +I NR D TAHAEI+A++ G Sbjct: 6 DDEFWMRHALSLAQRAWDEGEVPVGAVLVQGGNVIGEGWNRPIGRHDPTAHAEIMALQQG 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + LY+TLEPC MCA A+ +RI RL YGA++ K G + Sbjct: 66 GQTLQNYRLLDTTLYITLEPCVMCAGAMIHSRISRLVYGAADAKTGAAGSLVDILRHPGI 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ +++ FF+ RR Sbjct: 126 NHHIMITDGVLADECAELLSRFFRMRR 152 >gi|323465305|gb|ADX77458.1| tRNA-specific adenosine deaminase [Staphylococcus pseudintermedius ED99] Length = 157 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +MS ALEEA+ AA + E+P+GAV V N KII+RA N + TAHAE LA+ Sbjct: 1 MTSHQYYMSIALEEARKAAKKGEVPIGAVVVKNGKIIARAHNLRETDQSPTAHAEHLAME 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L LYVTLEPC MCA I ++R+ + +GA +PKGG + + + Sbjct: 61 RAAAQLGTWRLEGCTLYVTLEPCVMCAGTIVMSRVDTVVFGAMDPKGGCVGSLMNLVQDS 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ +I++ FF+ R Sbjct: 121 RMNHRASVVSGVLAYSCGEILRQFFRALR 149 >gi|145698301|ref|NP_417054.2| tRNA-specific adenosine deaminase [Escherichia coli str. K-12 substr. MG1655] gi|170082169|ref|YP_001731489.1| tRNA-specific adenosine deaminase [Escherichia coli str. K-12 substr. DH10B] gi|170682913|ref|YP_001744748.1| tRNA-specific adenosine deaminase [Escherichia coli SMS-3-5] gi|191167978|ref|ZP_03029780.1| tRNA-specific adenosine deaminase [Escherichia coli B7A] gi|194437606|ref|ZP_03069702.1| tRNA-specific adenosine deaminase [Escherichia coli 101-1] gi|238901724|ref|YP_002927520.1| tRNA-specific adenosine deaminase [Escherichia coli BW2952] gi|253772543|ref|YP_003035374.1| tRNA-specific adenosine deaminase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|256021756|ref|ZP_05435621.1| tRNA-specific adenosine deaminase [Escherichia sp. 4_1_40B] gi|260856653|ref|YP_003230544.1| tRNA-specific adenosine deaminase [Escherichia coli O26:H11 str. 11368] gi|260869246|ref|YP_003235648.1| tRNA-specific adenosine deaminase [Escherichia coli O111:H- str. 11128] gi|297516926|ref|ZP_06935312.1| tRNA-specific adenosine deaminase [Escherichia coli OP50] gi|307139195|ref|ZP_07498551.1| tRNA-specific adenosine deaminase [Escherichia coli H736] gi|307313870|ref|ZP_07593486.1| CMP/dCMP deaminase zinc-binding [Escherichia coli W] gi|150421688|sp|P68398|TADA_ECOLI RecName: Full=tRNA-specific adenosine deaminase gi|150421691|sp|P68397|TADA_SHIFL RecName: Full=tRNA-specific adenosine deaminase gi|145693172|gb|AAC75612.2| tRNA-specific adenosine deaminase [Escherichia coli str. K-12 substr. MG1655] gi|169890004|gb|ACB03711.1| tRNA-specific adenosine deaminase [Escherichia coli str. K-12 substr. DH10B] gi|170520631|gb|ACB18809.1| tRNA-specific adenosine deaminase [Escherichia coli SMS-3-5] gi|190901985|gb|EDV61732.1| tRNA-specific adenosine deaminase [Escherichia coli B7A] gi|194423412|gb|EDX39403.1| tRNA-specific adenosine deaminase [Escherichia coli 101-1] gi|238863717|gb|ACR65715.1| tRNA-specific adenosine deaminase [Escherichia coli BW2952] gi|253323587|gb|ACT28189.1| CMP/dCMP deaminase zinc-binding [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|257755302|dbj|BAI26804.1| tRNA-specific adenosine deaminase [Escherichia coli O26:H11 str. 11368] gi|257765602|dbj|BAI37097.1| tRNA-specific adenosine deaminase [Escherichia coli O111:H- str. 11128] gi|260448361|gb|ACX38783.1| CMP/dCMP deaminase zinc-binding protein [Escherichia coli DH1] gi|306906371|gb|EFN36886.1| CMP/dCMP deaminase zinc-binding [Escherichia coli W] gi|313651052|gb|EFS15452.1| tRNA-specific adenosine deaminase [Shigella flexneri 2a str. 2457T] gi|313848716|emb|CAQ32934.2| tRNA-specific adenosine deaminase monomer, subunit of tRNA-specific adenosine deaminase [Escherichia coli BL21(DE3)] gi|315061878|gb|ADT76205.1| tRNA-specific adenosine deaminase [Escherichia coli W] gi|320186358|gb|EFW61092.1| tRNA-specific adenosine-34 deaminase [Shigella flexneri CDC 796-83] gi|320200123|gb|EFW74712.1| tRNA-specific adenosine-34 deaminase [Escherichia coli EC4100B] gi|323377541|gb|ADX49809.1| CMP/dCMP deaminase zinc-binding protein [Escherichia coli KO11] gi|323936299|gb|EGB32590.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia coli E1520] gi|323941178|gb|EGB37363.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia coli E482] gi|323944616|gb|EGB40684.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia coli H120] gi|323961174|gb|EGB56787.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia coli H489] gi|323971115|gb|EGB66362.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia coli TA007] gi|324113086|gb|EGC07062.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia fergusonii B253] gi|324118231|gb|EGC12127.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia coli E1167] gi|332092598|gb|EGI97670.1| tRNA-specific adenosine deaminase [Shigella boydii 3594-74] gi|332344434|gb|AEE57768.1| tRNA-specific adenosine deaminase [Escherichia coli UMNK88] gi|332756134|gb|EGJ86485.1| tRNA-specific adenosine deaminase [Shigella flexneri 2747-71] gi|332765914|gb|EGJ96125.1| tRNA-specific adenosine deaminase monomer [Shigella flexneri 2930-71] gi|333002351|gb|EGK21915.1| tRNA-specific adenosine deaminase [Shigella flexneri K-272] gi|333016173|gb|EGK35505.1| tRNA-specific adenosine deaminase [Shigella flexneri K-227] gi|333016472|gb|EGK35803.1| tRNA-specific adenosine deaminase [Shigella flexneri K-304] Length = 167 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 7 SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 67 GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI ++ DFF+ RR Sbjct: 127 NHRVEITEGILADECAALLSDFFRMRR 153 >gi|95928326|ref|ZP_01311074.1| CMP/dCMP deaminase, zinc-binding [Desulfuromonas acetoxidans DSM 684] gi|95135597|gb|EAT17248.1| CMP/dCMP deaminase, zinc-binding [Desulfuromonas acetoxidans DSM 684] Length = 165 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 85/148 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M AL+ A+ A E+PVGAV VLN K+I+ AGNR +D TAHAE++A+R Sbjct: 4 SQDEHYMRRALDLARQAEQLGEVPVGAVVVLNGKVIAAAGNRRETWQDPTAHAELIALRE 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + L E LYVTLEPC MC I L+RI RL +GA +P+ G + + Sbjct: 64 AAKRIDSWRLEEATLYVTLEPCIMCMGGIILSRIPRLVFGARDPRVGAVGSVFDLADDER 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + +I+ +FF++ R Sbjct: 124 FNHRVEVSEGVLAEECSEILSNFFRQLR 151 >gi|74313082|ref|YP_311501.1| tRNA-specific adenosine deaminase [Shigella sonnei Ss046] gi|73856559|gb|AAZ89266.1| putative deaminase [Shigella sonnei Ss046] gi|323169455|gb|EFZ55128.1| tRNA-specific adenosine deaminase [Shigella sonnei 53G] Length = 178 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 18 SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 78 GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI ++ DFF+ RR Sbjct: 138 NHRVEITEGILADECAALLSDFFRMRR 164 >gi|24113886|ref|NP_708396.1| tRNA-specific adenosine deaminase [Shigella flexneri 2a str. 301] gi|30063946|ref|NP_838117.1| tRNA-specific adenosine deaminase [Shigella flexneri 2a str. 2457T] gi|82545011|ref|YP_408958.1| tRNA-specific adenosine deaminase [Shigella boydii Sb227] gi|89109365|ref|AP_003145.1| tRNA-specific adenosine deaminase [Escherichia coli str. K-12 substr. W3110] gi|157162036|ref|YP_001459354.1| tRNA-specific adenosine deaminase [Escherichia coli HS] gi|187730453|ref|YP_001881338.1| tRNA-specific adenosine deaminase [Shigella boydii CDC 3083-94] gi|188496019|ref|ZP_03003289.1| tRNA-specific adenosine deaminase [Escherichia coli 53638] gi|209920038|ref|YP_002294122.1| tRNA-specific adenosine deaminase [Escherichia coli SE11] gi|218547914|ref|YP_002381705.1| tRNA-specific adenosine deaminase [Escherichia fergusonii ATCC 35469] gi|218555084|ref|YP_002387997.1| tRNA-specific adenosine deaminase [Escherichia coli IAI1] gi|218696186|ref|YP_002403853.1| tRNA-specific adenosine deaminase [Escherichia coli 55989] gi|254162534|ref|YP_003045642.1| tRNA-specific adenosine deaminase [Escherichia coli B str. REL606] gi|256017292|ref|ZP_05431157.1| tRNA-specific adenosine deaminase [Shigella sp. D9] gi|293410974|ref|ZP_06654550.1| tRNA-specific adenosine deaminase [Escherichia coli B354] gi|300817664|ref|ZP_07097879.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 107-1] gi|300820763|ref|ZP_07100913.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 119-7] gi|300904258|ref|ZP_07122117.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 84-1] gi|300920727|ref|ZP_07137133.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 115-1] gi|300927064|ref|ZP_07142816.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 182-1] gi|300927685|ref|ZP_07143253.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 187-1] gi|300951723|ref|ZP_07165542.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 116-1] gi|300958800|ref|ZP_07170912.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 175-1] gi|301022068|ref|ZP_07185995.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 196-1] gi|301024846|ref|ZP_07188483.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 69-1] gi|301302925|ref|ZP_07209053.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 124-1] gi|301330339|ref|ZP_07222986.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 78-1] gi|301648323|ref|ZP_07248063.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 146-1] gi|312973195|ref|ZP_07787367.1| tRNA-specific adenosine deaminase [Escherichia coli 1827-70] gi|331643182|ref|ZP_08344317.1| tRNA-specific adenosine deaminase [Escherichia coli H736] gi|331664126|ref|ZP_08365036.1| tRNA-specific adenosine deaminase [Escherichia coli TA143] gi|331669308|ref|ZP_08370156.1| tRNA-specific adenosine deaminase [Escherichia coli TA271] gi|331678554|ref|ZP_08379229.1| tRNA-specific adenosine deaminase [Escherichia coli H591] gi|331684208|ref|ZP_08384804.1| tRNA-specific adenosine deaminase [Escherichia coli H299] gi|332278286|ref|ZP_08390699.1| tRNA-specific adenosine deaminase [Shigella sp. D9] gi|296183|emb|CAA51064.1| unnamed protein product [Escherichia coli] gi|987637|dbj|BAA10909.1| YFHC-ECOLI protein [Escherichia coli K-12] gi|1033148|gb|AAA79821.1| alternate name yfhC; orf178 of GenBank Accession Number X72336 [Escherichia coli str. K-12 substr. MG1655] gi|24052985|gb|AAN44103.1| putative deaminase [Shigella flexneri 2a str. 301] gi|30042202|gb|AAP17927.1| putative deaminase [Shigella flexneri 2a str. 2457T] gi|81246422|gb|ABB67130.1| putative deaminase [Shigella boydii Sb227] gi|85675450|dbj|BAE76735.1| tRNA-specific adenosine deaminase [Escherichia coli str. K12 substr. W3110] gi|157067716|gb|ABV06971.1| tRNA-specific adenosine deaminase [Escherichia coli HS] gi|187427445|gb|ACD06719.1| tRNA-specific adenosine deaminase [Shigella boydii CDC 3083-94] gi|188491218|gb|EDU66321.1| tRNA-specific adenosine deaminase [Escherichia coli 53638] gi|209913297|dbj|BAG78371.1| putative deaminase [Escherichia coli SE11] gi|218352918|emb|CAU98717.1| tRNA-specific adenosine deaminase [Escherichia coli 55989] gi|218355455|emb|CAQ88064.1| tRNA-specific adenosine deaminase [Escherichia fergusonii ATCC 35469] gi|218361852|emb|CAQ99452.1| tRNA-specific adenosine deaminase [Escherichia coli IAI1] gi|253974435|gb|ACT40106.1| tRNA-specific adenosine deaminase [Escherichia coli B str. REL606] gi|253978602|gb|ACT44272.1| tRNA-specific adenosine deaminase [Escherichia coli BL21(DE3)] gi|281601959|gb|ADA74943.1| tRNA-specific adenosine deaminase [Shigella flexneri 2002017] gi|291471442|gb|EFF13926.1| tRNA-specific adenosine deaminase [Escherichia coli B354] gi|299881373|gb|EFI89584.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 196-1] gi|300314548|gb|EFJ64332.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 175-1] gi|300396377|gb|EFJ79915.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 69-1] gi|300403791|gb|EFJ87329.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 84-1] gi|300412298|gb|EFJ95608.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 115-1] gi|300416948|gb|EFK00259.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 182-1] gi|300449007|gb|EFK12627.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 116-1] gi|300464238|gb|EFK27731.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 187-1] gi|300526516|gb|EFK47585.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 119-7] gi|300529652|gb|EFK50714.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 107-1] gi|300841860|gb|EFK69620.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 124-1] gi|300843673|gb|EFK71433.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 78-1] gi|301073599|gb|EFK88405.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 146-1] gi|309702891|emb|CBJ02222.1| tRNA-specific adenosine deaminase [Escherichia coli ETEC H10407] gi|310331790|gb|EFP99025.1| tRNA-specific adenosine deaminase [Escherichia coli 1827-70] gi|315137183|dbj|BAJ44342.1| tRNA-specific adenosine deaminase [Escherichia coli DH1] gi|315256586|gb|EFU36554.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 85-1] gi|315615821|gb|EFU96453.1| tRNA-specific adenosine deaminase [Escherichia coli 3431] gi|320196395|gb|EFW71019.1| tRNA-specific adenosine-34 deaminase [Escherichia coli WV_060327] gi|323156217|gb|EFZ42376.1| tRNA-specific adenosine deaminase [Escherichia coli EPECa14] gi|323170158|gb|EFZ55811.1| tRNA-specific adenosine deaminase [Escherichia coli LT-68] gi|323177311|gb|EFZ62899.1| tRNA-specific adenosine deaminase [Escherichia coli 1180] gi|323184561|gb|EFZ69935.1| tRNA-specific adenosine deaminase [Escherichia coli 1357] gi|324020017|gb|EGB89236.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 117-3] gi|325496361|gb|EGC94220.1| tRNA-specific adenosine deaminase [Escherichia fergusonii ECD227] gi|331039980|gb|EGI12200.1| tRNA-specific adenosine deaminase [Escherichia coli H736] gi|331059925|gb|EGI31902.1| tRNA-specific adenosine deaminase [Escherichia coli TA143] gi|331064502|gb|EGI36413.1| tRNA-specific adenosine deaminase [Escherichia coli TA271] gi|331075014|gb|EGI46334.1| tRNA-specific adenosine deaminase [Escherichia coli H591] gi|331079160|gb|EGI50362.1| tRNA-specific adenosine deaminase [Escherichia coli H299] gi|332100638|gb|EGJ03984.1| tRNA-specific adenosine deaminase [Shigella sp. D9] gi|333000545|gb|EGK20124.1| tRNA-specific adenosine deaminase [Shigella flexneri VA-6] Length = 178 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 18 SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 78 GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI ++ DFF+ RR Sbjct: 138 NHRVEITEGILADECAALLSDFFRMRR 164 >gi|271501609|ref|YP_003334635.1| CMP/dCMP deaminase zinc-binding protein [Dickeya dadantii Ech586] gi|270345164|gb|ACZ77929.1| CMP/dCMP deaminase zinc-binding protein [Dickeya dadantii Ech586] Length = 170 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL AQ A E+PVGAV V +++I NR D TAHAEI+A++ G Sbjct: 6 DDEFWMRHALSLAQRAWDEGEVPVGAVLVQGDRVIGEGWNRPIGRHDPTAHAEIMALQQG 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++L L + LY+TLEPC MCA A+ +RI RL YGA++ K G + Sbjct: 66 GQVLQNYRLLDTTLYITLEPCVMCAGAMIHSRITRLVYGAADAKTGAAGSLVDILRHPGM 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ Q +++ FF+ RR Sbjct: 126 NHQIAITDGVLAQECSELLSRFFRMRR 152 >gi|229194412|ref|ZP_04321217.1| hypothetical protein bcere0001_100 [Bacillus cereus m1293] gi|228589068|gb|EEK47081.1| hypothetical protein bcere0001_100 [Bacillus cereus m1293] Length = 166 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 60/151 (39%), Positives = 86/151 (56%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LA Sbjct: 1 MERDQDIHFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+ R Sbjct: 121 DERFNHQCEVVAGVLEEECGTLLTNFFRALR 151 >gi|163938030|ref|YP_001642914.1| CMP/dCMP deaminase zinc-binding [Bacillus weihenstephanensis KBAB4] gi|163860227|gb|ABY41286.1| CMP/dCMP deaminase zinc-binding [Bacillus weihenstephanensis KBAB4] Length = 164 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 61/145 (42%), Positives = 84/145 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ FM A+EEA+ A E+P+GAV VL+ ++IS A N + AHAE+LAI Sbjct: 1 MERDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + LYVTLEPC MCA I L+RI+R+ YGAS+PKGG T Sbjct: 61 EACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRIKRVVYGASDPKGGCAGTLMNLLTDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +H E+ PG+ E+ ++ FF Sbjct: 121 RFNHQCEVVPGVLEEECGTLLTIFF 145 >gi|323978411|gb|EGB73496.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia coli TW10509] Length = 167 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 7 SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 67 GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRISRVVFGARDAKTGAAGSLMDVLHHPGM 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI ++ DFF+ RR Sbjct: 127 NHRVEITEGILADECAALLSDFFRMRR 153 >gi|325264602|ref|ZP_08131332.1| cytidine/deoxycytidylate deaminase family protein [Clostridium sp. D5] gi|324030264|gb|EGB91549.1| cytidine/deoxycytidylate deaminase family protein [Clostridium sp. D5] Length = 159 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+ +A+ A E+P+G V V +KII R NR K+ AHAE+ AIR Sbjct: 1 MNADEKYMKEAIRQAKKAYALEEVPIGCVIVYQDKIIGRGYNRRTIDKNPLAHAELTAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L+ L E LYVTLEPC MC+ AI AR++R+ G NPK G + + Sbjct: 61 RASKKLNDWRLEECTLYVTLEPCQMCSGAIIQARVQRVVVGCMNPKAGCAGSILNLLEMK 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ +++ FFKE R Sbjct: 121 EFNHQAELTTGVLEKECSTMMKQFFKELR 149 >gi|110806489|ref|YP_690009.1| tRNA-specific adenosine deaminase [Shigella flexneri 5 str. 8401] gi|110616037|gb|ABF04704.1| putative deaminase [Shigella flexneri 5 str. 8401] Length = 167 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 7 SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 67 GLVMQNYRLIDATLYVTLEPCVMCAGAMLHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI ++ DFF+ RR Sbjct: 127 NHRVEITEGILADECAALLSDFFRMRR 153 >gi|325108107|ref|YP_004269175.1| tRNA-adenosine deaminase [Planctomyces brasiliensis DSM 5305] gi|324968375|gb|ADY59153.1| tRNA-adenosine deaminase [Planctomyces brasiliensis DSM 5305] Length = 162 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 54/146 (36%), Positives = 81/146 (55%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL+EA A E+PVGA+ V + +I+ A N+ L D TAHAE++A+ Sbjct: 12 HEEYMRMALDEAVAAFDEKEVPVGAIIVHDGHVIAAAHNQRETLNDPTAHAEMIALTQAA 71 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L L + LYVTLEPC MCA AI AR+ R+ YG ++ K G + + + Sbjct: 72 TALESWRLEDCTLYVTLEPCPMCAGAIVQARVPRVVYGTTDLKAGACHSLYSITSDPRLN 131 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ PG+ + I+Q+FF+++R Sbjct: 132 HRSEVLPGVLAPDCKAILQEFFRQQR 157 >gi|253689423|ref|YP_003018613.1| CMP/dCMP deaminase zinc-binding [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756001|gb|ACT14077.1| CMP/dCMP deaminase zinc-binding [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 165 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 78/149 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL AQ A E+PVGAV VL+N+ I NR D TAHAEI+A+R Sbjct: 1 MSNDEYWMRYALTLAQRAQDEGEVPVGAVLVLDNEAIGEGWNRPIGHHDPTAHAEIMALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 G ++L L + LYVTLEPC MCA A+ +RI RL YGAS+ K G + Sbjct: 61 QGGQVLQNYRLLDTTLYVTLEPCIMCAGAMIHSRIGRLVYGASDEKTGAAGSLVDILRHP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I GI + + FF+ RR Sbjct: 121 GMNHQIVIESGILAEECSATLSAFFRLRR 149 >gi|268593242|ref|ZP_06127463.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131] gi|291311137|gb|EFE51590.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131] Length = 160 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M A+E A A EIPVGAV V +N +++ NR+ + TAHAEI+A++ Sbjct: 4 IEIDEYWMQQAIELALKAQDLGEIPVGAVLVKDNHLVASGWNRSIIDHNPTAHAEIMALQ 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + LS L + LYVTLEPC MCA A+ +RI R+ YGA + K G + A Sbjct: 64 QAGQELSNYRLLDTTLYVTLEPCIMCAGAMIHSRISRVVYGAKDFKTGACGSYLDIMGQA 123 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ EQ+ ++ FFK RR Sbjct: 124 GLNHYVDVTGGVLEQQCSSMLSAFFKLRR 152 >gi|301051758|ref|YP_003789969.1| putative cytidine/deoxycytidylate deaminase family protein [Bacillus anthracis CI] gi|300373927|gb|ADK02831.1| probable cytidine/deoxycytidylate deaminase family protein [Bacillus cereus biovar anthracis str. CI] Length = 166 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 85/151 (56%), Gaps = 2/151 (1%) Query: 1 MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM A+EEA+ A E+P+GAV VLN ++IS A N + AHAE+LA Sbjct: 1 MERDQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISAAHNLRETEQRSIAHAELLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C+ L L + LYVTLEPC MCA I L+R+ R+ YGA +PKGG T Sbjct: 61 IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVNRVVYGAGDPKGGCAGTLMNLLT 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ +FF+E R Sbjct: 121 DERFNHQCEVVAGVLEEECGTLLTNFFRELR 151 >gi|329298459|ref|ZP_08255795.1| CMP/dCMP deaminase zinc-binding protein [Plautia stali symbiont] Length = 164 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M ALE A+ A + E+PVGAV V +++I NR D TAHAEI+A+R Sbjct: 4 QTDEYWMRHALELARRAWEQGEVPVGAVLVQGDRVIGEGWNRPISQCDPTAHAEIMALRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G +++ L + LYVTLEPC MCA A+ +RI RL YGA + K G + Sbjct: 64 GGKVIDNYRLLDTTLYVTLEPCVMCAGAMVHSRITRLVYGAKDEKTGAAGSLLDVIGHPG 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ ++ DFF+ RR Sbjct: 124 MNHQIEIAHGVLAGECATLLSDFFRMRR 151 >gi|283786173|ref|YP_003366038.1| tRNA-specific adenosine deaminase [Citrobacter rodentium ICC168] gi|282949627|emb|CBG89246.1| tRNA-specific adenosine deaminase [Citrobacter rodentium ICC168] Length = 180 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 20 SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 79 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 80 GLVLQNYRLIDATLYVTLEPCVMCAGAMVHSRISRVVFGARDAKTGAAGSLIDVLHHPGM 139 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ ++ DFF+ RR Sbjct: 140 NHRVEITEGVLRDECATLLSDFFRMRR 166 >gi|16761480|ref|NP_457097.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765888|ref|NP_461503.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29140823|ref|NP_804165.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62181133|ref|YP_217550.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224582890|ref|YP_002636688.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|25303877|pir||AF0827 conserved hypothetical protein STY2814 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|303325222|pdb|3OCQ|A Chain A, Crystal Structure Of Trna-Specific Adenosine Deaminase From Salmonella Enterica gi|16421115|gb|AAL21462.1| putative cytosine/adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503780|emb|CAD02770.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29136448|gb|AAO68014.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62128766|gb|AAX66469.1| putative Cytosine/adenosine deaminase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224467417|gb|ACN45247.1| hypothetical protein SPC_1081 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247763|emb|CBG25591.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994694|gb|ACY89579.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159116|emb|CBW18630.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|322715623|gb|EFZ07194.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130899|gb|ADX18329.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989495|gb|AEF08478.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 183 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G Sbjct: 18 DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 78 GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ ++ DFF+ RR Sbjct: 138 NHRVEIIEGVLRDECATLLSDFFRMRR 164 >gi|193068331|ref|ZP_03049294.1| tRNA-specific adenosine deaminase [Escherichia coli E110019] gi|260845189|ref|YP_003222967.1| tRNA-specific adenosine deaminase [Escherichia coli O103:H2 str. 12009] gi|192958283|gb|EDV88723.1| tRNA-specific adenosine deaminase [Escherichia coli E110019] gi|257760336|dbj|BAI31833.1| tRNA-specific adenosine deaminase [Escherichia coli O103:H2 str. 12009] Length = 167 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 7 SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 67 GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGAHDAKTGAAGSLMDVLHHPGM 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI ++ DFF+ RR Sbjct: 127 NHRVEITEGILADECAALLSDFFRMRR 153 >gi|238788214|ref|ZP_04632009.1| tRNA-specific adenosine deaminase [Yersinia frederiksenii ATCC 33641] gi|238723801|gb|EEQ15446.1| tRNA-specific adenosine deaminase [Yersinia frederiksenii ATCC 33641] Length = 191 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A A E+PVGA+ VL+N++I NR D TAHAEI+A+R G Sbjct: 31 SDEYWMQRALALALRAQEEGEVPVGAILVLDNQVIGEGWNRPIRDNDPTAHAEIMALRQG 90 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R + L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + Sbjct: 91 GRAVQNYRLIDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLLDILRHPGM 150 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + FF++RR Sbjct: 151 NHQIEVCSGVLADACSHQLSAFFRQRR 177 >gi|157157409|ref|YP_001463881.1| tRNA-specific adenosine deaminase [Escherichia coli E24377A] gi|193064070|ref|ZP_03045155.1| tRNA-specific adenosine deaminase [Escherichia coli E22] gi|194427252|ref|ZP_03059802.1| tRNA-specific adenosine deaminase [Escherichia coli B171] gi|293446913|ref|ZP_06663335.1| yfhC [Escherichia coli B088] gi|309794388|ref|ZP_07688811.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 145-7] gi|157079439|gb|ABV19147.1| tRNA-specific adenosine deaminase [Escherichia coli E24377A] gi|192929305|gb|EDV82914.1| tRNA-specific adenosine deaminase [Escherichia coli E22] gi|194414573|gb|EDX30845.1| tRNA-specific adenosine deaminase [Escherichia coli B171] gi|195183132|dbj|BAG66679.1| putative deaminase [Escherichia coli O111:H-] gi|291323743|gb|EFE63171.1| yfhC [Escherichia coli B088] gi|308121844|gb|EFO59106.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 145-7] gi|323159237|gb|EFZ45226.1| tRNA-specific adenosine deaminase [Escherichia coli E128010] Length = 178 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 18 SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 78 GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGAHDAKTGAAGSLMDVLHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI ++ DFF+ RR Sbjct: 138 NHRVEITEGILADECAALLSDFFRMRR 164 >gi|229826609|ref|ZP_04452678.1| hypothetical protein GCWU000182_01985 [Abiotrophia defectiva ATCC 49176] gi|229789479|gb|EEP25593.1| hypothetical protein GCWU000182_01985 [Abiotrophia defectiva ATCC 49176] Length = 167 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+++A+ A +E+P+G V VL+ KII+R NR AHAE++AI+ Sbjct: 1 MTTDEKWMKEAIKQAEKAKKLDEVPIGCVIVLDGKIIARGYNRRNTDHTSLAHAEMMAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ + L + LYVTLEPC MCA AI +R+ R+ GA N K G + Sbjct: 61 KACKKIRDWRLEKCTLYVTLEPCQMCAGAIVQSRVERVVIGAMNKKAGCAGSIFNLLEED 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E +++ FFKE R Sbjct: 121 RFNHKAEVVRGVLENECSEMMSMFFKELR 149 >gi|170767485|ref|ZP_02901938.1| tRNA-specific adenosine deaminase [Escherichia albertii TW07627] gi|170123819|gb|EDS92750.1| tRNA-specific adenosine deaminase [Escherichia albertii TW07627] Length = 178 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 18 SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 78 GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI ++ DFF+ RR Sbjct: 138 NHRVEITEGILADECAALLSDFFRMRR 164 >gi|16077086|ref|NP_387899.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp. subtilis str. 168] gi|221307827|ref|ZP_03589674.1| hypothetical protein Bsubs1_00090 [Bacillus subtilis subsp. subtilis str. 168] gi|221312149|ref|ZP_03593954.1| hypothetical protein BsubsN3_00090 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317082|ref|ZP_03598376.1| hypothetical protein BsubsJ_00090 [Bacillus subtilis subsp. subtilis str. JH642] gi|221321345|ref|ZP_03602639.1| hypothetical protein BsubsS_00090 [Bacillus subtilis subsp. subtilis str. SMY] gi|112703|sp|P21335|TADA_BACSU RecName: Full=tRNA-specific adenosine deaminase gi|40011|emb|CAA36389.1| unnamed protein product [Bacillus subtilis subsp. subtilis str. 168] gi|467408|dbj|BAA05254.1| unknown [Bacillus subtilis] gi|2632285|emb|CAB11794.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp. subtilis str. 168] gi|227231|prf||1617102A 17kD protein Length = 161 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 83/148 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + ++M A++EA+ A + E+P+GAV V+N +II+RA N + AHAE+L I Sbjct: 1 MTQDELYMKEAIKEAKKAEEKGEVPIGAVLVINGEIIARAHNLRETEQRSIAHAEMLVID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG Sbjct: 61 EACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGAFDPKGGCSGTLMNLLQEE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKER 148 +H E+ G+ E+ ++ FF+E Sbjct: 121 RFNHQAEVVSGVLEEECGGMLSAFFREL 148 >gi|212710654|ref|ZP_03318782.1| hypothetical protein PROVALCAL_01720 [Providencia alcalifaciens DSM 30120] gi|212686735|gb|EEB46263.1| hypothetical protein PROVALCAL_01720 [Providencia alcalifaciens DSM 30120] Length = 170 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 54/146 (36%), Positives = 79/146 (54%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ALE A+ A EIPVGA+ V +N++++ N + E D TAHAEI+ ++ Sbjct: 7 DEYWMLQALELAKKAQNAGEIPVGALLVKDNQLVATGWNHSIENHDPTAHAEIVTLKQAG 66 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L L + LYVTLEPC MCA A+ +RI R+ YGA + K G + + + Sbjct: 67 TALQNYRLLDTTLYVTLEPCIMCAGAMIHSRIGRVVYGAKDFKTGACGSFINIMSQPGLN 126 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ E ++ +FFK RR Sbjct: 127 HYVEVTSGVLEDACSSMLSEFFKMRR 152 >gi|288575144|ref|ZP_06393501.1| CMP/dCMP deaminase zinc-binding [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570885|gb|EFC92442.1| CMP/dCMP deaminase zinc-binding [Dethiosulfovibrio peptidovorans DSM 11002] Length = 162 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 65/149 (43%), Positives = 83/149 (55%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK N FM A+EEA+ AA +IPVGAV V N +I R N R D TAHAEI+AIR Sbjct: 1 MKNKN-FMDLAIEEAKKAASEGDIPVGAVVVYKNDVIGRGRNLRRIDHDPTAHAEIVAIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L ++YVTLEPC MCA AI +RI ++ YG ++PK G Sbjct: 60 QAAKARGSWNLSGCEIYVTLEPCPMCAGAIVQSRIAKVVYGCTDPKAGASGTLYDITRDT 119 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E R R +++DFF E R Sbjct: 120 RLNHRCEVIKGIEEDRCRNMLRDFFSECR 148 >gi|149182698|ref|ZP_01861165.1| probable cytidine/deoxycytidylate deaminase family protein [Bacillus sp. SG-1] gi|148849608|gb|EDL63791.1| probable cytidine/deoxycytidylate deaminase family protein [Bacillus sp. SG-1] Length = 173 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 54/147 (36%), Positives = 82/147 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM A++EA+ A + E+P+GAV VL+ ++I+ A N ++ HAE+LAI Sbjct: 3 TKQEYFMKLAIDEAKKAEDKAEVPIGAVVVLDGEVIASAHNLRETTQNAVTHAELLAIEE 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C+ L L +LYVTLEPC MC+ AI L+RI+ + YGA +PK G Sbjct: 63 ACKKLGTWRLENAELYVTLEPCPMCSGAIILSRIKTVVYGAPDPKAGCAGTLMNLLEDDR 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148 +H E+ PG+ ++ Q++ FF+ Sbjct: 123 FNHQCEVVPGVLQEECGQLLTHFFRGL 149 >gi|255279741|ref|ZP_05344296.1| tRNA-specific adenosine deaminase [Bryantella formatexigens DSM 14469] gi|255269514|gb|EET62719.1| tRNA-specific adenosine deaminase [Bryantella formatexigens DSM 14469] Length = 166 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 48/148 (32%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM A+ +A+ A +E+P+G V V + KII+R NR K+ +HAE++AI+ Sbjct: 7 KIHEKFMREAIRQAKKAYALDEVPIGCVIVQDGKIIARGYNRRNTDKNTLSHAELIAIKK 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L +Y+TLEPC MCA A+ AR+ G+ NPK G + + Sbjct: 67 AAKKTGDWRLEGCTMYITLEPCQMCAGAMVQARLTEAVIGSMNPKAGCAGSILNILEMPE 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E+ +++ FF+E R Sbjct: 127 FNHQVQVTRGVLEEECSELLSRFFRELR 154 >gi|328956593|ref|YP_004373979.1| tRNA specific adenosine deaminase [Carnobacterium sp. 17-4] gi|328672917|gb|AEB28963.1| tRNA specific adenosine deaminase [Carnobacterium sp. 17-4] Length = 174 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 63/148 (42%), Positives = 86/148 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A++EA A + E+P+GA+ VLN KII R NR E D T HAE+LAI+ Sbjct: 5 EDKTYFMQEAIKEAHKAEEKLEVPIGAIVVLNGKIIGRGHNRREESNDATTHAEMLAIQE 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L L E L+VTLEPC MC+ A+ L+R++ LYYGAS+PKGG T Sbjct: 65 ANRYLGNWRLEEAQLFVTLEPCPMCSGAMILSRVKELYYGASDPKGGTAGTLMNLLTDER 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I + EQ +++ FF+E R Sbjct: 125 FNHQVQIESSLLEQECGELLSTFFRELR 152 >gi|56412555|ref|YP_149630.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361490|ref|YP_002141126.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56126812|gb|AAV76318.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197092966|emb|CAR58397.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|320087069|emb|CBY96838.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 183 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G Sbjct: 18 DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 78 GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I G+ ++ DFF+ RR Sbjct: 138 NHRVDIIEGVLRDECATLLSDFFRMRR 164 >gi|109899420|ref|YP_662675.1| CMP/dCMP deaminase, zinc-binding [Pseudoalteromonas atlantica T6c] gi|109701701|gb|ABG41621.1| tRNA-adenosine deaminase [Pseudoalteromonas atlantica T6c] Length = 162 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ ++M AL A AA EIPVGAV V + KI+ N++ L D +AHAE+LAIR Sbjct: 3 LEQDQLWMRHALSLASKAAQAGEIPVGAVLVKDQKIVGEGWNQSITLNDPSAHAEMLAIR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + LYVTLEPCTMCA + +RI+RL +GA + K G + Sbjct: 63 QAGINVKNYRLIDTTLYVTLEPCTMCAGLLVHSRIKRLVFGAYDAKTGAAGSIMDVLNDT 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + + I FF++RR Sbjct: 123 RLNHQVEVVGGVLGEECGETISAFFRQRR 151 >gi|188533151|ref|YP_001906948.1| tRNA-specific adenosine deaminase [Erwinia tasmaniensis Et1/99] gi|188028193|emb|CAO96051.1| tRNA-specific adenosine deaminase [Erwinia tasmaniensis Et1/99] Length = 186 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M AL+ A+ A E+PVGAV VL+ ++I NR D TAHAE++A+R Sbjct: 24 RNDEYWMRHALQLARRAWNEGEVPVGAVLVLDGQVIGEGWNRPIGHHDPTAHAEMMALRQ 83 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G +++ L + LYVTLEPC MCA A+ R+ RL YGA + K G + Sbjct: 84 GGKVIENYRLMDTTLYVTLEPCVMCAGAMVHGRVGRLVYGARDAKTGAAGSLLDVLGHPG 143 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ +FF++RR Sbjct: 144 MNHRVRVDCGVLADECAAMLSEFFRQRR 171 >gi|15612596|ref|NP_240899.1| Cu binding protein (Mn oxidation) [Bacillus halodurans C-125] gi|10172645|dbj|BAB03752.1| Cu binding protein (Mn oxidation) [Bacillus halodurans C-125] Length = 159 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 54/150 (36%), Positives = 79/150 (52%), Gaps = 1/150 (0%) Query: 1 MKKGN-VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M+K + +M AL +A A E+P+GAV V + ++++A N + AHAE+LAI Sbjct: 1 MQKDDLYYMREALVQADEAERLGEVPIGAVIVKDGVVVAKAYNLREINQQAIAHAELLAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 C+ L L LYVTLEPC MCA AI +RI R+ YGA++PK G Sbjct: 61 EKACKALGTWRLTGCTLYVTLEPCPMCAGAIVQSRIERVVYGATDPKAGCAGTLMNLLNE 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ Q + FF++ R Sbjct: 121 ERFNHQTIVESGVLEEECSQRLTAFFRKLR 150 >gi|329768262|ref|ZP_08259763.1| hypothetical protein HMPREF0428_01460 [Gemella haemolysans M341] gi|328837461|gb|EGF87090.1| hypothetical protein HMPREF0428_01460 [Gemella haemolysans M341] Length = 155 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK + +M ALEEA+ A + E+P+GAV V++ ++I++A N E + HAE+LAI+ Sbjct: 1 MKDHSYYMEMALEEARRAYAKGEVPIGAVLVVDGEVIAKAHNTREEHQQALNHAEMLAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C L LY T+EPC MC+ AI AR+ + YGAS+PK G + Sbjct: 61 EACEKQGFWRLDNSYLYTTVEPCVMCSGAIVQARVENVIYGASDPKYGCCGSCIDLVGEN 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++++FFKE R Sbjct: 121 KFNHQAEVISGVLEEECSMLMKNFFKELR 149 >gi|218132702|ref|ZP_03461506.1| hypothetical protein BACPEC_00563 [Bacteroides pectinophilus ATCC 43243] gi|217992428|gb|EEC58431.1| hypothetical protein BACPEC_00563 [Bacteroides pectinophilus ATCC 43243] Length = 160 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 76/149 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A+++A+ A E P+G V V NKII+R NR K HAEI AIR Sbjct: 6 LNDDEKYMKEAIKQARKAYKIGESPIGCVIVYQNKIIARGYNRRNIDKTTLGHAEITAIR 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +++ L + +YVTLEPC MCA AI ARI R+ GA NPK G + + Sbjct: 66 KASKVIGDWRLEDCTIYVTLEPCQMCAGAIVQARIPRVVIGAMNPKAGCAGSVLNLLEIP 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ ++ FF+E R Sbjct: 126 QFNHQCDVERGVLADECSGLMSSFFRELR 154 >gi|320176139|gb|EFW51206.1| tRNA-specific adenosine-34 deaminase [Shigella dysenteriae CDC 74-1112] Length = 178 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 18 SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ L + LYVTLEPC MCA A++ +RI R+ +GA + K G + Sbjct: 78 GLVMQNYRLIDATLYVTLEPCVMCAGAMTHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI ++ DFF+ RR Sbjct: 138 NHRVEITEGILADECAALLSDFFRMRR 164 >gi|304405747|ref|ZP_07387405.1| CMP/dCMP deaminase zinc-binding [Paenibacillus curdlanolyticus YK9] gi|304344990|gb|EFM10826.1| CMP/dCMP deaminase zinc-binding [Paenibacillus curdlanolyticus YK9] Length = 148 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 53/142 (37%), Positives = 77/142 (54%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M+ A+EEA+ A E+P+GAV V N ++I R N D TAHAEI+AIR + + Sbjct: 1 MAEAIEEARKAEAIGEVPIGAVIVRNGEVIGRGYNLRETDHDATAHAEIIAIREASKHIE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA AI +R++R+ YG +PK G +H E Sbjct: 61 AWRLLDSTLYVTLEPCPMCAGAIVQSRVKRVVYGTHDPKAGCAGTLMNLLQEPRFNHETE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ ++ ++ FF+ R Sbjct: 121 LTSGVMQEECASLLTTFFRRLR 142 >gi|87310742|ref|ZP_01092869.1| cytosine deaminase [Blastopirellula marina DSM 3645] gi|87286499|gb|EAQ78406.1| cytosine deaminase [Blastopirellula marina DSM 3645] Length = 166 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 60/146 (41%), Positives = 85/146 (58%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +FM ALE A+ AA E+PVGA+ V NN++I+ A N+ L D TAHAE++AI Sbjct: 16 HQIFMYQALELAEQAAREKEVPVGAIIVHNNRVIAAAHNQRETLHDPTAHAEMIAITQAA 75 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L L + LYVTLEPC MCA AI ARI + +GA +PK G + + + + + Sbjct: 76 ESLQNWRLADCTLYVTLEPCPMCAGAILQARIPTVVFGAIDPKAGAVTSLYTLLSDSRLN 135 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ PGI + ++ +FF+ RR Sbjct: 136 HRCEVVPGILAPQCGDVLTEFFRARR 161 >gi|284049062|ref|YP_003399401.1| CMP/dCMP deaminase zinc-binding protein [Acidaminococcus fermentans DSM 20731] gi|283953283|gb|ADB48086.1| CMP/dCMP deaminase zinc-binding protein [Acidaminococcus fermentans DSM 20731] Length = 159 Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 65/148 (43%), Positives = 88/148 (59%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM ALEEA+ AA EIPVGAV V + ++++R NR + +D TAHAE L IR Sbjct: 12 QRDVHFMEMALEEARQAAREGEIPVGAVLVRDGQVLARDHNRREQDRDATAHAEFLVIRQ 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 CR+L + L + LYVTLEPC MCA AI AR+ RL YGA + G + + Sbjct: 72 ACRLLRRWRLSDTTLYVTLEPCPMCAGAIWNARVGRLVYGAWDSAAGSCGSQFNLPAHPS 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + E+ G+ E+ R+I+QDF K RR Sbjct: 132 LNFRTEVTAGVLEEECRKILQDFLKARR 159 >gi|154684537|ref|YP_001419698.1| YaaJ [Bacillus amyloliquefaciens FZB42] gi|154350388|gb|ABS72467.1| YaaJ [Bacillus amyloliquefaciens FZB42] Length = 160 Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 84/147 (57%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A++EA+ A + E+P+GAV VL+++I++RA N + AHAE+LAI Sbjct: 2 NDEYYMREAIKEAKKAEAKGEVPIGAVLVLHDEIVARAHNLRETEQRSLAHAEMLAIDEA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 CR L L + LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG Sbjct: 62 CRKLGTWRLEDAVLYVTLEPCPMCAGAVVLSRVDKVVFGAFDPKGGCTGTLMNLLQEERF 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + +++ FF++ R Sbjct: 122 NHQAEVVSGVLGEECGEMLSAFFRKLR 148 >gi|118580679|ref|YP_901929.1| CMP/dCMP deaminase [Pelobacter propionicus DSM 2379] gi|118503389|gb|ABK99871.1| tRNA-adenosine deaminase [Pelobacter propionicus DSM 2379] Length = 181 Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 55/141 (39%), Positives = 80/141 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M A+ EA A R+E+P+G V V +N+II+R N +D +AHAE++AIR Sbjct: 13 RSHEYWMQRAIAEAGKARSRDEVPIGCVIVRDNRIIARGHNLRESSQDPSAHAEMIAIRK 72 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R LS L + LYVTLEPCTMC AI L+RI R+ +G +PKGG + Sbjct: 73 AARKLSSWRLLDTTLYVTLEPCTMCMGAIILSRIPRVVFGCLDPKGGAAGSLYDLSNDPR 132 Query: 122 CHHSPEIYPGISEQRSRQIIQ 142 +H E+ PG+ E+ ++ Sbjct: 133 LNHRVELLPGVLERDCSSLLS 153 >gi|171463305|ref|YP_001797418.1| CMP/dCMP deaminase zinc-binding [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192843|gb|ACB43804.1| CMP/dCMP deaminase zinc-binding [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 152 Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 56/146 (38%), Positives = 83/146 (56%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A+E+AQ AA E+PVGAV V + ++I++A N+ D +AHAE+LA+R Sbjct: 7 DQQYMRMAIEQAQLAAQAGEVPVGAVLVKDGQVIAKAFNKPIANHDPSAHAEMLALREAA 66 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 +P LYVTLEPC MC+ A+ ARI R+ +GA +PK G + + + Sbjct: 67 LAQENYRIPGSTLYVTLEPCAMCSGAMLHARIDRVVFGAPDPKTGAAGSVLDLFASKQIN 126 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI + Q+++DFFK RR Sbjct: 127 HQTSVEGGIMSEECGQLLRDFFKRRR 152 >gi|329666788|gb|AEB92736.1| cytosine/adenosine deaminase [Lactobacillus johnsonii DPC 6026] Length = 160 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 89/149 (59%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M A E+A+ A + E+P+GAV V + +I NR +D T HAE++AIR Sbjct: 5 EQKEKYMHLAFEQAKKAEEQGEVPIGAVVVDKDGNVIGEGYNRRELDEDATQHAEMIAIR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L+ L + L++TLEPC MC+ AI +R+ +YYGA +PK G + + + Sbjct: 65 QACKKLNSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAAGSVIDLFKVE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P+IY G+ ++ Q+++DFF+E R Sbjct: 125 KFNHHPKIYGGLFRDQASQMLKDFFREIR 153 >gi|313905719|ref|ZP_07839079.1| Cof-like hydrolase [Eubacterium cellulosolvens 6] gi|313469426|gb|EFR64768.1| Cof-like hydrolase [Eubacterium cellulosolvens 6] Length = 450 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 50/145 (34%), Positives = 79/145 (54%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A+ EA+ AA E+P+GAV V + +II+R NR + +HAE+ A+R + Sbjct: 299 EKYMRAAIREAKRAASIGEVPIGAVIVRDGEIIARGYNRRNTDHNTLSHAELNALRKASK 358 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L +YVT+EPC MCA A+ +RI ++ G +PK G + + +H Sbjct: 359 KLGDWRLEGCTMYVTMEPCQMCAGALVQSRIDKVVIGCMSPKTGCAGSVMNLMQVPVFNH 418 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 S E+ GI E+ +I+ +FF+ R Sbjct: 419 SVELEKGILEEECSRILTEFFENLR 443 >gi|262281785|ref|ZP_06059554.1| cytidine/deoxycytidylate deaminase [Streptococcus sp. 2_1_36FAA] gi|262262239|gb|EEY80936.1| cytidine/deoxycytidylate deaminase [Streptococcus sp. 2_1_36FAA] Length = 162 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 84/148 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL+EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 13 EEKEYFMLEALKEARIALENDEIPIGCVIVRDGQIIGRGHNAREELQRAVMHAEIMAIEE 72 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + L + L+VT+EPC MC+ AI LARI + YGASN K G + T Sbjct: 73 ANQHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGASNQKFGAAGSLYDILTDER 132 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+QDFF+ RR Sbjct: 133 LNHRVEVETGVLQEECAQIMQDFFRNRR 160 >gi|183599769|ref|ZP_02961262.1| hypothetical protein PROSTU_03276 [Providencia stuartii ATCC 25827] gi|188022032|gb|EDU60072.1| hypothetical protein PROSTU_03276 [Providencia stuartii ATCC 25827] Length = 178 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 85/148 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M ALE A+NA EIPVGA+ V +N++I+ NR+ E D TAHAEI+ ++ Sbjct: 5 EVDEFWMKRALELAKNAQDAGEIPVGALLVKDNQLIASGWNRSIESHDPTAHAEIMVLQQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G R LS L + LYVTLEPC MCA A+ +RI RL YGA + K G + Sbjct: 65 GGRALSNYRLLDTTLYVTLEPCIMCAGALVHSRIGRLVYGARDFKTGACGSFINILERPG 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E+ ++ +FFK RR Sbjct: 125 LNHYVDVKGGVLEETCSAMLSNFFKMRR 152 >gi|291482388|dbj|BAI83463.1| hypothetical protein BSNT_00036 [Bacillus subtilis subsp. natto BEST195] Length = 161 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 84/148 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + ++M A++EA+ A + E+P+GAV V+N++II+RA N + AHAE+L I Sbjct: 1 MTQDELYMKEAIKEAKKAEEKGEVPIGAVLVVNDEIIARAHNLRETEQRSIAHAEMLVID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG Sbjct: 61 EACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGAFDPKGGCSGTLMNLLQEE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKER 148 +H E+ G+ E+ ++ FF+E Sbjct: 121 RFNHQAEVVSGVLEEECGGMLSAFFREL 148 >gi|322613338|gb|EFY10280.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322633869|gb|EFY30608.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635475|gb|EFY32186.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322654860|gb|EFY51177.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661716|gb|EFY57934.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669697|gb|EFY65843.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673296|gb|EFY69401.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322674915|gb|EFY71002.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682938|gb|EFY78956.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685599|gb|EFY81594.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323191973|gb|EFZ77211.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323211560|gb|EFZ96398.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215992|gb|EGA00724.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323225619|gb|EGA09846.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229337|gb|EGA13461.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235348|gb|EGA19432.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237466|gb|EGA21529.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323254025|gb|EGA37846.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323269662|gb|EGA53114.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 183 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G Sbjct: 18 DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA AI +RI R+ +GA + K G + Sbjct: 78 GLVLQNYRLLDTTLYVTLEPCVMCAGAIVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I G+ ++ DFF+ RR Sbjct: 138 NHRVDIIEGVLRDECATLLSDFFRMRR 164 >gi|83588899|ref|YP_428908.1| tRNA-adenosine deaminase [Moorella thermoacetica ATCC 39073] gi|83571813|gb|ABC18365.1| tRNA-adenosine deaminase [Moorella thermoacetica ATCC 39073] Length = 150 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 64/147 (43%), Positives = 88/147 (59%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL+EA+ A E+P+GAV V +II+RAGNR L D TAHAEI+A+R Sbjct: 2 DHHFYMGEALDEARKAFDLGEVPIGAVIVAGGEIIARAGNRRETLADPTAHAEIIALRAA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R+ L LYVTLEPC MCA A+ ARIR+L YGA + + G +++ Sbjct: 62 ARVRGDWRLTGATLYVTLEPCPMCAGALVQARIRQLVYGAPDLRSGAVDSVVNLVENPHF 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ PGI E+ R++I+ FF+ RR Sbjct: 122 DHQVEVIPGIREEECRELIKKFFQMRR 148 >gi|323487362|ref|ZP_08092661.1| tRNA-specific adenosine deaminase [Clostridium symbiosum WAL-14163] gi|323399323|gb|EGA91722.1| tRNA-specific adenosine deaminase [Clostridium symbiosum WAL-14163] Length = 184 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 77/149 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+ EA+ A E+P+G V V KII R NR K+V +HAEI AI+ Sbjct: 30 MTDDEKYMRAAIREAKKAYALGEVPIGCVIVFEGKIIGRGYNRRIADKNVLSHAEINAIK 89 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ + L +Y+TLEPC MCA AI ARI ++ G+ NPK G + Sbjct: 90 KACKKMGDWRLEGCTMYITLEPCPMCAGAIVQARIPKVLIGSMNPKAGCAGSVMNLLDEK 149 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E GI + ++++FF+E R Sbjct: 150 GFNHQVETEIGILGEECSGMLKEFFRELR 178 >gi|156932900|ref|YP_001436816.1| hypothetical protein ESA_00702 [Cronobacter sakazakii ATCC BAA-894] gi|156531154|gb|ABU75980.1| hypothetical protein ESA_00702 [Cronobacter sakazakii ATCC BAA-894] Length = 213 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 76/147 (51%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL AQ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 47 THEYWMRHALTLAQRAWDEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 106 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ RI L +GA + K G + + Sbjct: 107 GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHGRIGTLVFGARDAKTGAVGSLMDITGHPGM 166 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ GI ++ FF++RR Sbjct: 167 NHQVQVIEGILATECSAMLSAFFRQRR 193 >gi|170019158|ref|YP_001724112.1| tRNA-specific adenosine deaminase [Escherichia coli ATCC 8739] gi|169754086|gb|ACA76785.1| CMP/dCMP deaminase zinc-binding [Escherichia coli ATCC 8739] Length = 167 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 7 SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G + + Sbjct: 67 GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHSGM 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI ++ DFF+ RR Sbjct: 127 NHRVEITEGILADECAALLSDFFRMRR 153 >gi|149176635|ref|ZP_01855247.1| cytosine deaminase [Planctomyces maris DSM 8797] gi|148844514|gb|EDL58865.1| cytosine deaminase [Planctomyces maris DSM 8797] Length = 171 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 55/146 (37%), Positives = 82/146 (56%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A +EA+ A +E+PVGAV V ++II+ A N+ L D TAHAE++AI Sbjct: 21 HTRWMRYAYDEARAAFEEDEVPVGAVIVYQDRIIAAAHNQREMLSDPTAHAEMIAITQAA 80 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L L + LYVTLEPC MCA AI +R+ + YG + K G + Q + A + Sbjct: 81 ESLGSWRLSDCVLYVTLEPCPMCAGAIVQSRLPLVIYGTRDEKAGACHSLFQITSDARLN 140 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ ++ R I+Q+FF+ +R Sbjct: 141 HQSTVISGVMQEECRGILQEFFRRKR 166 >gi|160936895|ref|ZP_02084259.1| hypothetical protein CLOBOL_01784 [Clostridium bolteae ATCC BAA-613] gi|158440085|gb|EDP17832.1| hypothetical protein CLOBOL_01784 [Clostridium bolteae ATCC BAA-613] Length = 244 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 83/148 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +K FM AL +AQ AA ++P+G V V +KII+R NR K V +HAEI++I+ Sbjct: 93 QKDEGFMREALRQAQKAAAIGDVPIGCVIVRGDKIIARGYNRRNADKSVLSHAEIISIKK 152 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C+ + L + +YVTLEPC MCA AI ARI R+ G NPK G + + Sbjct: 153 ACKKIGDWRLEDCTMYVTLEPCPMCAGAIVQARIPRIAVGCMNPKAGCAGSVLDMLHVPG 212 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ EQ +++ DFF+ R Sbjct: 213 FNHQAEVTEGVLEQECSKLMSDFFQSLR 240 >gi|37527198|ref|NP_930542.1| tRNA-specific adenosine deaminase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36786632|emb|CAE15694.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 173 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 82/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A+E A A + EIPVGA+ V +NKIIS N++ D TAHAEI+ +R G Sbjct: 6 SDEYWMQQAIERAIKAWEQGEIPVGAILVADNKIISEGWNQSIIAHDPTAHAEIIVLRKG 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L LYVTLEPCTMCA A+ +RI+RL YGAS+ K G + + Sbjct: 66 GERLRNYRLINTTLYVTLEPCTMCAGAMIHSRIQRLVYGASDMKTGAVGSLVDILRHPGM 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I G+ + ++ FFK+RR Sbjct: 126 NHQIDITSGVLAEECSTMLSAFFKQRR 152 >gi|168757783|ref|ZP_02782790.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4401] gi|168768660|ref|ZP_02793667.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4486] gi|188024727|ref|ZP_02773396.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4113] gi|189403941|ref|ZP_02786184.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4501] gi|195936706|ref|ZP_03082088.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4024] gi|208806459|ref|ZP_03248796.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4206] gi|208812941|ref|ZP_03254270.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4045] gi|208820370|ref|ZP_03260690.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4042] gi|209400171|ref|YP_002272033.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4115] gi|215487903|ref|YP_002330334.1| tRNA-specific adenosine deaminase [Escherichia coli O127:H6 str. E2348/69] gi|217327122|ref|ZP_03443205.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. TW14588] gi|254794508|ref|YP_003079345.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. TW14359] gi|261223005|ref|ZP_05937286.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. FRIK2000] gi|261259444|ref|ZP_05951977.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. FRIK966] gi|306814377|ref|ZP_07448539.1| tRNA-specific adenosine deaminase [Escherichia coli NC101] gi|150421686|sp|Q8XA44|TADA_ECO57 RecName: Full=tRNA-specific adenosine deaminase gi|150421687|sp|Q8FF24|TADA_ECOL6 RecName: Full=tRNA-specific adenosine deaminase gi|188017152|gb|EDU55274.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4113] gi|189355294|gb|EDU73713.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4401] gi|189362211|gb|EDU80630.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4486] gi|189368357|gb|EDU86773.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4501] gi|208726260|gb|EDZ75861.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4206] gi|208734218|gb|EDZ82905.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4045] gi|208740493|gb|EDZ88175.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4042] gi|209161571|gb|ACI39004.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4115] gi|215265975|emb|CAS10384.1| tRNA-specific adenosine deaminase [Escherichia coli O127:H6 str. E2348/69] gi|217319489|gb|EEC27914.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. TW14588] gi|254593908|gb|ACT73269.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. TW14359] gi|305851771|gb|EFM52223.1| tRNA-specific adenosine deaminase [Escherichia coli NC101] gi|312947130|gb|ADR27957.1| tRNA-specific adenosine deaminase [Escherichia coli O83:H1 str. NRG 857C] gi|320180559|gb|EFW55490.1| tRNA-specific adenosine-34 deaminase [Shigella boydii ATCC 9905] gi|320188900|gb|EFW63559.1| tRNA-specific adenosine-34 deaminase [Escherichia coli O157:H7 str. EC1212] gi|320640908|gb|EFX10396.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. G5101] gi|320646350|gb|EFX15277.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H- str. 493-89] gi|320651530|gb|EFX19917.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H- str. H 2687] gi|320657241|gb|EFX25050.1| tRNA-specific adenosine deaminase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662847|gb|EFX30179.1| tRNA-specific adenosine deaminase [Escherichia coli O55:H7 str. USDA 5905] gi|320667651|gb|EFX34566.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. LSU-61] gi|323955795|gb|EGB51553.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia coli H263] gi|323968007|gb|EGB63419.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia coli M863] gi|326340365|gb|EGD64169.1| tRNA-specific adenosine-34 deaminase [Escherichia coli O157:H7 str. 1125] gi|332088011|gb|EGI93136.1| tRNA-specific adenosine deaminase [Shigella boydii 5216-82] gi|332089781|gb|EGI94882.1| tRNA-specific adenosine deaminase [Shigella dysenteriae 155-74] Length = 167 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A+ A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 7 SHEYWMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 67 GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI ++ DFF+ RR Sbjct: 127 NHRVEITEGILADECAALLSDFFRMRR 153 >gi|15803084|ref|NP_289115.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 EDL933] gi|15832679|ref|NP_311452.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. Sakai] gi|82777934|ref|YP_404283.1| tRNA-specific adenosine deaminase [Shigella dysenteriae Sd197] gi|91211884|ref|YP_541870.1| tRNA-specific adenosine deaminase [Escherichia coli UTI89] gi|110642721|ref|YP_670451.1| tRNA-specific adenosine deaminase [Escherichia coli 536] gi|117624781|ref|YP_853694.1| tRNA-specific adenosine deaminase [Escherichia coli APEC O1] gi|187775816|ref|ZP_02798525.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4196] gi|189009982|ref|ZP_02803540.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4076] gi|189405037|ref|ZP_02812923.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC869] gi|189405736|ref|ZP_02823945.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC508] gi|191172647|ref|ZP_03034186.1| tRNA-specific adenosine deaminase [Escherichia coli F11] gi|194432153|ref|ZP_03064442.1| tRNA-specific adenosine deaminase [Shigella dysenteriae 1012] gi|218559479|ref|YP_002392392.1| tRNA-specific adenosine deaminase [Escherichia coli S88] gi|218690674|ref|YP_002398886.1| tRNA-specific adenosine deaminase [Escherichia coli ED1a] gi|237705067|ref|ZP_04535548.1| tRNA-specific adenosine deaminase [Escherichia sp. 3_2_53FAA] gi|291283784|ref|YP_003500602.1| tRNA-specific adenosine deaminase [Escherichia coli O55:H7 str. CB9615] gi|293415828|ref|ZP_06658471.1| tRNA-specific adenosine deaminase [Escherichia coli B185] gi|300935691|ref|ZP_07150661.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 21-1] gi|300974171|ref|ZP_07172489.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 200-1] gi|309784689|ref|ZP_07679322.1| tRNA-specific adenosine deaminase [Shigella dysenteriae 1617] gi|331648252|ref|ZP_08349342.1| tRNA-specific adenosine deaminase [Escherichia coli M605] gi|331653994|ref|ZP_08354995.1| tRNA-specific adenosine deaminase [Escherichia coli M718] gi|331658703|ref|ZP_08359647.1| tRNA-specific adenosine deaminase [Escherichia coli TA206] gi|12516972|gb|AAG57673.1|AE005486_4 putative deaminase [Escherichia coli O157:H7 str. EDL933] gi|13362896|dbj|BAB36848.1| putative deaminase [Escherichia coli O157:H7 str. Sakai] gi|81242082|gb|ABB62792.1| putative deaminase [Shigella dysenteriae Sd197] gi|91073458|gb|ABE08339.1| putative deaminase [Escherichia coli UTI89] gi|110344313|gb|ABG70550.1| hypothetical protein YfhC [Escherichia coli 536] gi|115513905|gb|ABJ01980.1| tRNA-specific adenosine deaminase [Escherichia coli APEC O1] gi|187770595|gb|EDU34439.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4196] gi|189003519|gb|EDU72505.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC4076] gi|189372298|gb|EDU90714.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC869] gi|189378592|gb|EDU97008.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str. EC508] gi|190907120|gb|EDV66720.1| tRNA-specific adenosine deaminase [Escherichia coli F11] gi|194419682|gb|EDX35762.1| tRNA-specific adenosine deaminase [Shigella dysenteriae 1012] gi|209762958|gb|ACI79791.1| putative deaminase [Escherichia coli] gi|209762960|gb|ACI79792.1| putative deaminase [Escherichia coli] gi|209762962|gb|ACI79793.1| putative deaminase [Escherichia coli] gi|209762964|gb|ACI79794.1| putative deaminase [Escherichia coli] gi|209762966|gb|ACI79795.1| putative deaminase [Escherichia coli] gi|218366248|emb|CAR03995.1| tRNA-specific adenosine deaminase [Escherichia coli S88] gi|218428238|emb|CAR09014.1| tRNA-specific adenosine deaminase [Escherichia coli ED1a] gi|222034264|emb|CAP77005.1| tRNA-specific adenosine deaminase [Escherichia coli LF82] gi|226901433|gb|EEH87692.1| tRNA-specific adenosine deaminase [Escherichia sp. 3_2_53FAA] gi|290763657|gb|ADD57618.1| tRNA-specific adenosine deaminase [Escherichia coli O55:H7 str. CB9615] gi|291433476|gb|EFF06455.1| tRNA-specific adenosine deaminase [Escherichia coli B185] gi|294489520|gb|ADE88276.1| tRNA-specific adenosine deaminase [Escherichia coli IHE3034] gi|300308910|gb|EFJ63430.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 200-1] gi|300459125|gb|EFK22618.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 21-1] gi|307625893|gb|ADN70197.1| tRNA-specific adenosine deaminase [Escherichia coli UM146] gi|308927059|gb|EFP72533.1| tRNA-specific adenosine deaminase [Shigella dysenteriae 1617] gi|315288035|gb|EFU47437.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 110-3] gi|315300515|gb|EFU59744.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 16-3] gi|323188326|gb|EFZ73618.1| tRNA-specific adenosine deaminase [Escherichia coli RN587/1] gi|323949213|gb|EGB45104.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Escherichia coli H252] gi|324013577|gb|EGB82796.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 60-1] gi|326345048|gb|EGD68792.1| tRNA-specific adenosine-34 deaminase [Escherichia coli O157:H7 str. 1044] gi|327252269|gb|EGE63941.1| tRNA-specific adenosine deaminase [Escherichia coli STEC_7v] gi|330912330|gb|EGH40840.1| tRNA-specific adenosine-34 deaminase [Escherichia coli AA86] gi|331043112|gb|EGI15252.1| tRNA-specific adenosine deaminase [Escherichia coli M605] gi|331048843|gb|EGI20919.1| tRNA-specific adenosine deaminase [Escherichia coli M718] gi|331054368|gb|EGI26395.1| tRNA-specific adenosine deaminase [Escherichia coli TA206] Length = 178 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A+ A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 18 SHEYWMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 78 GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI ++ DFF+ RR Sbjct: 138 NHRVEITEGILADECAALLSDFFRMRR 164 >gi|205353664|ref|YP_002227465.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857975|ref|YP_002244626.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|205273445|emb|CAR38422.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206709778|emb|CAR34130.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326628768|gb|EGE35111.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 183 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G Sbjct: 18 DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 78 GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I G+ ++ DFF+ RR Sbjct: 138 NHRVDIIEGVLRDECATLLSDFFRMRR 164 >gi|167758650|ref|ZP_02430777.1| hypothetical protein CLOSCI_00991 [Clostridium scindens ATCC 35704] gi|167663846|gb|EDS07976.1| hypothetical protein CLOSCI_00991 [Clostridium scindens ATCC 35704] Length = 157 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 54/146 (36%), Positives = 80/146 (54%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A+ +A+ A E+P+G V V +KII R NR K+ +HAE++AIR Sbjct: 5 DEKYMKEAIRQARKAYAIGEVPIGCVIVYKDKIIGRGYNRRMADKNTLSHAELIAIRKAS 64 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R + L E +YVTLEPC MC+ AI +R+ R+ G NPK G + + + Sbjct: 65 RKMGDWRLEECTMYVTLEPCQMCSGAIVQSRMSRVVVGCMNPKAGCAGSILNLLQMTEFN 124 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ E+ Q+++DFFKE R Sbjct: 125 HQAELTTGVLEEECSQMMKDFFKELR 150 >gi|329770051|ref|ZP_08261446.1| hypothetical protein HMPREF0433_01210 [Gemella sanguinis M325] gi|328837362|gb|EGF86992.1| hypothetical protein HMPREF0433_01210 [Gemella sanguinis M325] Length = 155 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 50/149 (33%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK+ + +M ALEEA++A + E+P+GAV V++ ++++ N E + HAE++AI+ Sbjct: 1 MKEHSYYMELALEEARSAYEKGEVPIGAVLVVDGQVVACGHNTREETQQALNHAEMIAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C L LY T+EPC MC+ AI AR+ + YGA +PK G + + Sbjct: 61 KACEKQGFWRLDNSYLYTTIEPCVMCSGAIVQARVENVIYGAKDPKYGCCGSCMDLVSDN 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E ++++FFKE R Sbjct: 121 KFNHQANVISGVLEDECSSLMRNFFKELR 149 >gi|161502277|ref|YP_001569389.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863624|gb|ABX20247.1| hypothetical protein SARI_00307 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 176 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G Sbjct: 18 DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RIRR+ +GA + K G + Sbjct: 78 GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIRRVVFGARDAKTGAAGSLIDVLHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ ++ DFF+ RR Sbjct: 138 NHRVEIIEGVLHDECAMLLSDFFRMRR 164 >gi|157371891|ref|YP_001479880.1| CMP/dCMP deaminase zinc-binding [Serratia proteamaculans 568] gi|157323655|gb|ABV42752.1| CMP/dCMP deaminase zinc-binding [Serratia proteamaculans 568] Length = 170 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A A E+PVGA+ VL+N++I NR D TAHAEI+A+R G Sbjct: 5 NDEYWMRQALRLALRAQEEGEVPVGALLVLDNQVIGEGWNRPIGRHDPTAHAEIMALRQG 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L LYVTLEPC MCA A+ +RIRRL YGA++ K G + Sbjct: 65 GAVLQNYRLLNATLYVTLEPCVMCAGAMVHSRIRRLVYGAADVKTGAAGSLVDILRHPGM 124 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + + +FF+ RR Sbjct: 125 NHQVEILSGVLAEECAATLSNFFRMRR 151 >gi|126652937|ref|ZP_01725079.1| probable cytidine/deoxycytidylate deaminase family protein [Bacillus sp. B14905] gi|126590267|gb|EAZ84389.1| probable cytidine/deoxycytidylate deaminase family protein [Bacillus sp. B14905] Length = 170 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 87/148 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +FM ALEEA+ AA+ E+P+GAV V + +II+RA N ++ T HAE++ I+ Sbjct: 5 ETDRLFMKQALEEAKKAAILGEVPIGAVLVYDGEIIARAHNLRETTQNATTHAELMVIQE 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C+ + L + LYVTLEPC MCA AI +R+ R+ YGA + K G +++ + A Sbjct: 65 ACQKIGSWRLEKTTLYVTLEPCPMCAGAILQSRVPRVVYGARDMKAGCVDSLYRLLNDAR 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI QI+ DFF+ R Sbjct: 125 FNHECEVSEGILAAECGQILTDFFRALR 152 >gi|297616226|ref|YP_003701385.1| CMP/dCMP deaminase zinc-binding protein [Syntrophothermus lipocalidus DSM 12680] gi|297144063|gb|ADI00820.1| CMP/dCMP deaminase zinc-binding protein [Syntrophothermus lipocalidus DSM 12680] Length = 155 Score = 223 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 54/146 (36%), Positives = 79/146 (54%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM A+E A + E+PVGAV V N +IIS A N + +D TAHAE+LAI+ Sbjct: 7 DEDFMRRAVELGWAAFHQGEVPVGAVVVKNGEIISSAHNEKEKRQDATAHAEMLAIQRAS 66 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L L + LY T+EPC MCA AI ARI+++ +GA + K G + + Sbjct: 67 QALGTWRLQDTTLYSTIEPCPMCAGAIVQARIKKVVFGARDLKAGAGGSLINVLDFPGLN 126 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ E +++ +FF+ R Sbjct: 127 HRVEVIEGVLEDECTELMTEFFRRLR 152 >gi|167038582|ref|YP_001666160.1| CMP/dCMP deaminase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167038705|ref|YP_001661690.1| CMP/dCMP deaminase [Thermoanaerobacter sp. X514] gi|256751425|ref|ZP_05492303.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter ethanolicus CCSD1] gi|300913736|ref|ZP_07131053.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter sp. X561] gi|307723248|ref|YP_003902999.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter sp. X513] gi|320116977|ref|YP_004187136.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166852945|gb|ABY91354.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter sp. X514] gi|166857416|gb|ABY95824.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749644|gb|EEU62670.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter ethanolicus CCSD1] gi|300890421|gb|EFK85566.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter sp. X561] gi|307580309|gb|ADN53708.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter sp. X513] gi|319930068|gb|ADV80753.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 148 Score = 223 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 60/145 (41%), Positives = 81/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM AL EA+ + E+PVGAV V +II R N+ D TAHAEI+AI+ C+ Sbjct: 3 NKFMEAALLEAKKSYQLGEVPVGAVIVKEGQIIGRGFNQKESTNDATAHAEIIAIKEACK 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + +YVTLEPC MCA AI ARI+R+Y GA + K G + Sbjct: 63 TLGSWRLDDCSMYVTLEPCPMCAGAILEARIKRVYIGAESDKSGAAGTVVDILNNSYLGS 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+Y GI E+ + +++DFF+ R Sbjct: 123 KTEVYFGIMEEECKTLLKDFFENLR 147 >gi|218701072|ref|YP_002408701.1| tRNA-specific adenosine deaminase [Escherichia coli IAI39] gi|218371058|emb|CAR18885.1| tRNA-specific adenosine deaminase [Escherichia coli IAI39] Length = 178 Score = 223 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A+ A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 18 SHEYWMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 78 GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI ++ DFF+ RR Sbjct: 138 NHRVEIIEGILADECAALLSDFFRMRR 164 >gi|228989231|ref|ZP_04149225.1| hypothetical protein bpmyx0001_110 [Bacillus pseudomycoides DSM 12442] gi|228995414|ref|ZP_04155085.1| hypothetical protein bmyco0003_200 [Bacillus mycoides Rock3-17] gi|229003028|ref|ZP_04160886.1| hypothetical protein bmyco0002_210 [Bacillus mycoides Rock1-4] gi|228758228|gb|EEM07415.1| hypothetical protein bmyco0002_210 [Bacillus mycoides Rock1-4] gi|228764340|gb|EEM13216.1| hypothetical protein bmyco0003_200 [Bacillus mycoides Rock3-17] gi|228770506|gb|EEM19076.1| hypothetical protein bpmyx0001_110 [Bacillus pseudomycoides DSM 12442] Length = 165 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 59/145 (40%), Positives = 82/145 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ FM A+EEA+ A E+P+GAV VL ++IS A N + AHAE+LAI Sbjct: 1 MEQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLGGEVISVAHNLRETEQRSIAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 EACKKLGTWRLENATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +H E+ G+ E+ ++ +FF Sbjct: 121 RFNHQCEVVSGVMEEECGMLLTNFF 145 >gi|260589044|ref|ZP_05854957.1| tRNA-specific adenosine deaminase [Blautia hansenii DSM 20583] gi|331083249|ref|ZP_08332362.1| hypothetical protein HMPREF0992_01286 [Lachnospiraceae bacterium 6_1_63FAA] gi|260540823|gb|EEX21392.1| tRNA-specific adenosine deaminase [Blautia hansenii DSM 20583] gi|330404330|gb|EGG83875.1| hypothetical protein HMPREF0992_01286 [Lachnospiraceae bacterium 6_1_63FAA] Length = 164 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 77/149 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM A ++A A E+P+G V V KII+R NR K+ +HAEI AIR Sbjct: 1 MTEDERFMREAKKQAMKAYALREVPIGCVIVYEGKIIARGYNRRNTDKNTVSHAEINAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L LYVTLEPC MCA AI AR+ R+ G+ NPK G + + Sbjct: 61 KASKKLGDWRLEGCTLYVTLEPCQMCAGAIIQARVDRVVIGSMNPKAGCAGSVLNLLEMD 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ FFKE R Sbjct: 121 GFNHKAEVTRGVLEEECSSMLSGFFKELR 149 >gi|225376320|ref|ZP_03753541.1| hypothetical protein ROSEINA2194_01960 [Roseburia inulinivorans DSM 16841] gi|225211696|gb|EEG94050.1| hypothetical protein ROSEINA2194_01960 [Roseburia inulinivorans DSM 16841] Length = 166 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 49/145 (33%), Positives = 76/145 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ EA+ A +E+P+G V V + II+R NR + AHAE+ AI+ Sbjct: 3 MTQDEKYMKAAIREAKKAYALDEVPIGCVIVQDGTIIARGYNRRNTEGNTLAHAELTAIK 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + +YVTLEPC MCA AI +R++++ NPK G + +A Sbjct: 63 KASKKTGDWRLEDCTMYVTLEPCQMCAGAIVQSRMKKVVIATMNPKAGCAGSVLNLLQMA 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +H EI G+ E+ ++ DFF Sbjct: 123 AFNHQVEIEKGVLEEECSMMLSDFF 147 >gi|229083334|ref|ZP_04215694.1| hypothetical protein bcere0022_180 [Bacillus cereus Rock3-44] gi|228699981|gb|EEL52606.1| hypothetical protein bcere0022_180 [Bacillus cereus Rock3-44] Length = 165 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 58/145 (40%), Positives = 83/145 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ FM A+EEA+ A E+P+GAV VL+ +++S A N + AHAE+LAI Sbjct: 1 MEQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVVSVAHNLRETEQRSIAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L LYVTLEPC MCA I L+R++R+ YGAS+PKGG T Sbjct: 61 EACKKLGTWRLENATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +H E+ G+ E+ ++ +FF Sbjct: 121 RFNHQCEVVSGVMEEECGTLLTNFF 145 >gi|16804756|ref|NP_466241.1| hypothetical protein lmo2719 [Listeria monocytogenes EGD-e] gi|224502871|ref|ZP_03671178.1| hypothetical protein LmonFR_10179 [Listeria monocytogenes FSL R2-561] gi|255029049|ref|ZP_05301000.1| hypothetical protein LmonL_07681 [Listeria monocytogenes LO28] gi|16412219|emb|CAD00932.1| lmo2719 [Listeria monocytogenes EGD-e] Length = 156 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 59/144 (40%), Positives = 86/144 (59%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 5 FFMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 65 QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E S ++++ FF+E R Sbjct: 125 CEVEAGLMESESSEMLKSFFQELR 148 >gi|148543562|ref|YP_001270932.1| tRNA-adenosine deaminase [Lactobacillus reuteri DSM 20016] gi|184152969|ref|YP_001841310.1| cytosine/adenosine deaminase [Lactobacillus reuteri JCM 1112] gi|227363478|ref|ZP_03847600.1| tRNA-adenosine deaminase [Lactobacillus reuteri MM2-3] gi|325681912|ref|ZP_08161430.1| tRNA-specific adenosine deaminase [Lactobacillus reuteri MM4-1A] gi|148530596|gb|ABQ82595.1| tRNA-adenosine deaminase [Lactobacillus reuteri DSM 20016] gi|183224313|dbj|BAG24830.1| cytosine/adenosine deaminase [Lactobacillus reuteri JCM 1112] gi|227071492|gb|EEI09793.1| tRNA-adenosine deaminase [Lactobacillus reuteri MM2-3] gi|324978556|gb|EGC15505.1| tRNA-specific adenosine deaminase [Lactobacillus reuteri MM4-1A] Length = 170 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 59/152 (38%), Positives = 90/152 (59%), Gaps = 7/152 (4%) Query: 1 MKKGN-------VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAH 53 MKK N FM A+ EA+ A + +E+P+GA+ V + ++I R N + +DVT H Sbjct: 1 MKKNNSSLSEQQKFMKMAIAEAKQARILDEVPIGAIVVHDGQVIGRGHNMREKFQDVTYH 60 Query: 54 AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 AE+LAI C L L + DLYVTLEPC MC+ AI ARI+ +YYGA++PK G +++ Sbjct: 61 AEMLAIMEACTNLGSWRLEDCDLYVTLEPCIMCSGAIINARIKNVYYGAADPKAGAVDSL 120 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + + +H ++ GI Q++++FF Sbjct: 121 YHLLSDSRLNHQVNVHSGILGDECSQMLKNFF 152 >gi|26248923|ref|NP_754963.1| tRNA-specific adenosine deaminase [Escherichia coli CFT073] gi|227887593|ref|ZP_04005398.1| tRNA-specific adenosine deaminase [Escherichia coli 83972] gi|300982262|ref|ZP_07175973.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 45-1] gi|301047197|ref|ZP_07194289.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 185-1] gi|312965474|ref|ZP_07779706.1| tRNA-specific adenosine deaminase [Escherichia coli 2362-75] gi|26109329|gb|AAN81531.1|AE016764_213 Hypothetical protein yfhC [Escherichia coli CFT073] gi|227835943|gb|EEJ46409.1| tRNA-specific adenosine deaminase [Escherichia coli 83972] gi|300300874|gb|EFJ57259.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 185-1] gi|300408816|gb|EFJ92354.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 45-1] gi|307554578|gb|ADN47353.1| tRNA-specific adenosine deaminase [Escherichia coli ABU 83972] gi|312289894|gb|EFR17782.1| tRNA-specific adenosine deaminase [Escherichia coli 2362-75] gi|315292466|gb|EFU51818.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 153-1] gi|324008467|gb|EGB77686.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 57-2] Length = 178 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A+ A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 18 SHEYWMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 78 GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI ++ DFF+ RR Sbjct: 138 NHRVEITEGILADECAALLSDFFRMRR 164 >gi|238784197|ref|ZP_04628210.1| tRNA-specific adenosine deaminase [Yersinia bercovieri ATCC 43970] gi|238714906|gb|EEQ06905.1| tRNA-specific adenosine deaminase [Yersinia bercovieri ATCC 43970] Length = 181 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 82/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A A E+PVGAV VL+N++I NR+ D TAHAEI+A+R G Sbjct: 18 SDEYWMQRALMLALRAQEEGEVPVGAVLVLDNQVIGEGWNRSICDSDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +++ L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + Sbjct: 78 GQVVQNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLLDILRHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + Q + FF++RR Sbjct: 138 NHQVEISAGVLAEACSQQLSAFFRQRR 164 >gi|308050412|ref|YP_003913978.1| tRNA-adenosine deaminase [Ferrimonas balearica DSM 9799] gi|307632602|gb|ADN76904.1| tRNA-adenosine deaminase [Ferrimonas balearica DSM 9799] Length = 170 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ +M+ A++ A+ A E+PVGAV V + ++I+ N++ L D +AHAE+L +R Sbjct: 1 MEQHQKWMAHAMKLAEQAEALGEVPVGAVLVRDGEVIAEGFNQSITLNDPSAHAEMLCLR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + LYVTLEPC+MCA A+ ARI L YGAS+ K G + Sbjct: 61 AAGQALENYRLLDTTLYVTLEPCSMCAGAMVHARIGTLVYGASDAKTGAAGSVMDLVRHP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + + FFK+RR Sbjct: 121 ALNHQLEVISGVLSEPCATQLSAFFKKRR 149 >gi|197264537|ref|ZP_03164611.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205356928|ref|ZP_02343159.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|197242792|gb|EDY25412.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205325427|gb|EDZ13266.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 172 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G Sbjct: 7 DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 67 GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ ++ DFF+ RR Sbjct: 127 NHRVEIIEGVLRDECATLLSDFFRMRR 153 >gi|312173235|emb|CBX81490.1| tRNA-specific adenosine deaminase [Erwinia amylovora ATCC BAA-2158] Length = 166 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV VL+N++I NR D TAHAE++A+R G Sbjct: 5 NDEYWMRHALRLARRAWDEGEVPVGAVLVLDNQVIGEGWNRPIGHHDPTAHAEMMALRQG 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +++ L + LYVTLEPC MCA A+ +RI RL YGA + K G + Sbjct: 65 GKMIENYRLLDTTLYVTLEPCVMCAGAMIHSRIGRLVYGARDAKTGAAGSLLDVLGHPGM 124 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ ++ DFF++RR Sbjct: 125 NHQVPAECGLLNDECAAMLSDFFRQRR 151 >gi|330007694|ref|ZP_08306033.1| cytidine and deoxycytidylate deaminase zinc-binding region [Klebsiella sp. MS 92-3] gi|328535375|gb|EGF61857.1| cytidine and deoxycytidylate deaminase zinc-binding region [Klebsiella sp. MS 92-3] Length = 180 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 18 NDEYWMRHALTLAKRAWEEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI RL +GA + K G + + Sbjct: 78 GLVLQNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAVGSLMDVLHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + ++ DFF+ RR Sbjct: 138 NHRVEISEGVLAESCSAMLSDFFRWRR 164 >gi|323694203|ref|ZP_08108379.1| cytidine and deoxycytidylate deaminase [Clostridium symbiosum WAL-14673] gi|323501676|gb|EGB17562.1| cytidine and deoxycytidylate deaminase [Clostridium symbiosum WAL-14673] Length = 155 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 77/149 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+ EA+ A E+P+G V V KII R NR K+V +HAEI AI+ Sbjct: 1 MTDDEKYMRAAIREAKKAYALGEVPIGCVIVFEGKIIGRGYNRRIADKNVLSHAEINAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ + L +Y+TLEPC MCA AI ARI ++ G+ NPK G + Sbjct: 61 KACKKMGDWRLEGCTMYITLEPCPMCAGAIVQARIPKVLIGSMNPKAGCAGSVMNLLDEK 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E GI + ++++FF+E R Sbjct: 121 GFNHQVETEIGILGEECSGMLKEFFRELR 149 >gi|218706062|ref|YP_002413581.1| tRNA -specific adenosine deaminase [Escherichia coli UMN026] gi|293406001|ref|ZP_06649993.1| tRNA-specific adenosine deaminase [Escherichia coli FVEC1412] gi|298381801|ref|ZP_06991400.1| tRNA-specific adenosine deaminase [Escherichia coli FVEC1302] gi|300898326|ref|ZP_07116674.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 198-1] gi|218433159|emb|CAR14055.1| tRNA-specific adenosine deaminase [Escherichia coli UMN026] gi|284922509|emb|CBG35596.1| tRNA-specific adenosine deaminase [Escherichia coli 042] gi|291428209|gb|EFF01236.1| tRNA-specific adenosine deaminase [Escherichia coli FVEC1412] gi|298279243|gb|EFI20757.1| tRNA-specific adenosine deaminase [Escherichia coli FVEC1302] gi|300357988|gb|EFJ73858.1| cytidine and deoxycytidylate deaminase zinc-binding region [Escherichia coli MS 198-1] Length = 178 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A+ A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 18 SHEYWMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 78 GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI GI ++ DFF+ RR Sbjct: 138 NHRVEITEGILADECAALLSDFFRMRR 164 >gi|89100955|ref|ZP_01173801.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus sp. NRRL B-14911] gi|89084326|gb|EAR63481.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Bacillus sp. NRRL B-14911] Length = 180 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 60/146 (41%), Positives = 85/146 (58%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M A+EEA+ A E+P+GAV VL+ KIISRA N ++ AHAE+LAI Sbjct: 11 NDDDYMKEAIEEAKKAGELGEVPIGAVVVLDGKIISRAHNLRESNQNAVAHAELLAIEEA 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C +L L + LYVTLEPC MC+ AI L+RI+R+ YGA++PKGG Sbjct: 71 CGMLGTWRLEDAALYVTLEPCAMCSGAIILSRIKRVVYGAADPKGGCAGTFMNLLQDERF 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKER 148 +H E+ G+ E+ ++ DFF+ Sbjct: 131 NHQSEVSAGVLEEECGSLLTDFFRAL 156 >gi|290476033|ref|YP_003468930.1| TadA, tRNA-specific adenosine deaminase [Xenorhabdus bovienii SS-2004] gi|289175363|emb|CBJ82166.1| TadA, tRNA-specific adenosine deaminase [Xenorhabdus bovienii SS-2004] Length = 169 Score = 223 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 63/147 (42%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A+E A A ++EIPVGAV V NNKII+ N D TAHAEI+A+R G Sbjct: 6 SDEYWMRRAMELAMQAQSQDEIPVGAVLVANNKIIAEGYNHPITEHDPTAHAEIIALRRG 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L LYVTLEPC MCA A+ +RI+RL YGAS+ K G + Sbjct: 66 GIELQNYRLLNTTLYVTLEPCVMCAGAMVHSRIQRLVYGASDMKTGAAGSLIDILRHPGM 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ Q ++ FFK+RR Sbjct: 126 NHQIEITAGVLAQECATMLSTFFKQRR 152 >gi|90579814|ref|ZP_01235622.1| Putative cytosine/adenosine deaminase [Vibrio angustum S14] gi|90438699|gb|EAS63882.1| Putative cytosine/adenosine deaminase [Vibrio angustum S14] Length = 175 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A+E A A E+PVGAV V N +++ NR+ D TAHAEI+A+R Sbjct: 9 NDEYFMRRAIELAAKAEEEGEVPVGAVVVYNGQVVGEGWNRSIGQHDATAHAEIMALRQA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++L L + LYVTLEPC MCA A+ R+ ++ YGA + K G + + Sbjct: 69 GKVLENYRLIDTTLYVTLEPCPMCAGAMVHCRVGKVVYGADDLKTGAAGSTMNLLSYDGV 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E G+ + R +Q FFK RR Sbjct: 129 NHHVEQTSGVLVEECRAQLQAFFKRRR 155 >gi|294496892|ref|YP_003560592.1| tRNA-specific adenosine deaminase [Bacillus megaterium QM B1551] gi|294346829|gb|ADE67158.1| tRNA-specific adenosine deaminase [Bacillus megaterium QM B1551] Length = 156 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A++EA A + E+P+GAV V N+++++ A N + AHAE+LAI Sbjct: 1 MLNDEKYMRLAIDEALKAKDKLEVPIGAVIVQNDEVVASAYNLRETEQRSVAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + LYVTLEPC MCA AI L+R++R+ +GA +PKGG Sbjct: 61 EACKKLGTWRLEDATLYVTLEPCPMCAGAIVLSRVKRVVFGAYDPKGGCAGTLLNLLEFE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E+ ++ FF+E R Sbjct: 121 KFNHQAQVVGGMLEEECGSLLTTFFRELR 149 >gi|146293740|ref|YP_001184164.1| CMP/dCMP deaminase, zinc-binding [Shewanella putrefaciens CN-32] gi|145565430|gb|ABP76365.1| tRNA-adenosine deaminase [Shewanella putrefaciens CN-32] Length = 164 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 73/146 (50%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A++ A+ A E+PVGAV V + + I+ N + D TAHAEIL +R Sbjct: 2 DEYWMQVAMQMAEKAEAAGEVPVGAVLVKDGQQIATGYNLSISQHDPTAHAEILCLRSAG 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L L + LY+TLEPC MCA A+ +RI R+ YGA + K G + Sbjct: 62 KKLENYRLLDATLYITLEPCAMCAGAMVHSRIARVVYGARDEKTGAAGTVVNLLQHPAFN 121 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ + + FFK RR Sbjct: 122 HQVEVTSGVLAEACSAQLSRFFKRRR 147 >gi|194735718|ref|YP_002115631.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197301052|ref|ZP_02663371.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204929496|ref|ZP_03220570.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|194711220|gb|ACF90441.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288879|gb|EDY28252.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204321215|gb|EDZ06415.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 172 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G Sbjct: 7 DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 67 GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I G+ ++ DFF+ RR Sbjct: 127 NHRVDIIEGVLRDECATLLSDFFRMRR 153 >gi|197119924|ref|YP_002140351.1| tRNA (adenosine-34) deaminase [Geobacter bemidjiensis Bem] gi|197089284|gb|ACH40555.1| tRNA (adenosine-34) deaminase [Geobacter bemidjiensis Bem] Length = 166 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + +M A+ +A+ A E+P+GAV V + II+R N +D AHAE++AIR Sbjct: 3 RDDHYWMGKAIAQARRAEAIGEVPIGAVIVKDGVIIARGHNLRESNQDPAAHAEMIAIRK 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L+ L LYVTLEPCTMC A+ L+R+ R+ +G+ +PKGG + Sbjct: 63 AAKKLASWRLTGATLYVTLEPCTMCMGAVILSRLDRVVFGSYDPKGGAAGSLYDLSDDKR 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +HS + PG+ + + ++ FF E R Sbjct: 123 LNHSVVLTPGVRGEETSSMLSGFFAELR 150 >gi|47095526|ref|ZP_00233135.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes str. 1/2a F6854] gi|254899824|ref|ZP_05259748.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes J0161] gi|254912971|ref|ZP_05262983.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes J2818] gi|254937352|ref|ZP_05269049.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes F6900] gi|255025258|ref|ZP_05297244.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes FSL J2-003] gi|284800395|ref|YP_003412260.1| hypothetical protein LM5578_0141 [Listeria monocytogenes 08-5578] gi|284993581|ref|YP_003415349.1| hypothetical protein LM5923_0141 [Listeria monocytogenes 08-5923] gi|47016136|gb|EAL07060.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes str. 1/2a F6854] gi|258609958|gb|EEW22566.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes F6900] gi|284055957|gb|ADB66898.1| hypothetical protein LM5578_0141 [Listeria monocytogenes 08-5578] gi|284059048|gb|ADB69987.1| hypothetical protein LM5923_0141 [Listeria monocytogenes 08-5923] gi|293590973|gb|EFF99307.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes J2818] Length = 156 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 59/144 (40%), Positives = 86/144 (59%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 5 FFMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 65 QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E S ++++ FF+E R Sbjct: 125 CEVEAGLMESESSEMLKSFFQELR 148 >gi|254827285|ref|ZP_05231972.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL N3-165] gi|258599666|gb|EEW12991.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL N3-165] Length = 156 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 58/144 (40%), Positives = 86/144 (59%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 5 FFMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 65 QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ S ++++ FF+ R Sbjct: 125 CEVEAGLMEKESSEMLKSFFQNLR 148 >gi|223939608|ref|ZP_03631483.1| CMP/dCMP deaminase zinc-binding [bacterium Ellin514] gi|223891766|gb|EEF58252.1| CMP/dCMP deaminase zinc-binding [bacterium Ellin514] Length = 168 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 66/149 (44%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ N FM AL +A A R E+P+GAV V +II+RA N+ LKD TAHAE+LAI Sbjct: 9 LQSDNYFMGEALRQAVKAYDREEVPIGAVIVREGRIIARAFNQVETLKDATAHAEMLAIT 68 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L E LYVT EPC MCA AI R+ R+ +G S+PKGGG Sbjct: 69 QAEAAVGDWRLNECTLYVTKEPCPMCAGAIVHVRLSRVVFGLSDPKGGGAGGAMNLLQFP 128 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 T +H EI G+ EQ R ++Q FF E+R Sbjct: 129 TLNHRAEITHGVREQECRSLLQQFFSEQR 157 >gi|46908898|ref|YP_015287.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes serotype 4b str. F2365] gi|254851976|ref|ZP_05241324.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL R2-503] gi|254931009|ref|ZP_05264368.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes HPB2262] gi|254994111|ref|ZP_05276301.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes FSL J2-064] gi|300763522|ref|ZP_07073520.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes FSL N1-017] gi|46882171|gb|AAT05464.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes serotype 4b str. F2365] gi|258605274|gb|EEW17882.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL R2-503] gi|293582555|gb|EFF94587.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes HPB2262] gi|300515799|gb|EFK42848.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes FSL N1-017] gi|328469576|gb|EGF40517.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes 220] gi|332313149|gb|EGJ26244.1| tRNA-specific adenosine deaminase [Listeria monocytogenes str. Scott A] Length = 156 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 58/144 (40%), Positives = 87/144 (60%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 5 FFMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 65 QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ S ++++ FF++ R Sbjct: 125 CEVEAGLMEKESSEMLKSFFQDLR 148 >gi|227888770|ref|ZP_04006575.1| nucleoside deaminase [Lactobacillus johnsonii ATCC 33200] gi|227850607|gb|EEJ60693.1| nucleoside deaminase [Lactobacillus johnsonii ATCC 33200] Length = 160 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 89/149 (59%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M A E+A+ A + E+P+GAV V + +I NR +D T HAE++AIR Sbjct: 5 EQKEKYMHLAFEQAKKAEEQGEVPIGAVVVDKDGNVIGEGYNRRELDEDATQHAEMIAIR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L+ L + L++TLEPC MC+ AI +R+ +YYGA +PK G + + + Sbjct: 65 QACKKLNSWRLVDCSLFITLEPCPMCSGAIINSRLVEVYYGAFDPKAGAAGSVIDLFKVE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P+IY G+ ++ Q+++DFF+E R Sbjct: 125 KFNHHPKIYGGLFRDQAAQMLKDFFREIR 153 >gi|194451068|ref|YP_002046630.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195874089|ref|ZP_02700525.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205357850|ref|ZP_02573795.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205359212|ref|ZP_02668290.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205360435|ref|ZP_02683354.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|213053109|ref|ZP_03345987.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425288|ref|ZP_03358038.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213586542|ref|ZP_03368368.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213650179|ref|ZP_03380232.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213857782|ref|ZP_03384753.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|150421689|sp|Q8XGY4|TADA_SALTI RecName: Full=tRNA-specific adenosine deaminase gi|150421690|sp|Q7CQ08|TADA_SALTY RecName: Full=tRNA-specific adenosine deaminase gi|194409372|gb|ACF69591.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195630767|gb|EDX49359.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205329109|gb|EDZ15873.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205337614|gb|EDZ24378.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205349365|gb|EDZ35996.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|312913557|dbj|BAJ37531.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321222726|gb|EFX47797.1| tRNA-specific adenosine-34 deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 172 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G Sbjct: 7 DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 67 GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ ++ DFF+ RR Sbjct: 127 NHRVEIIEGVLRDECATLLSDFFRMRR 153 >gi|290891900|ref|ZP_06554897.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL J2-071] gi|290558494|gb|EFD92011.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL J2-071] Length = 156 Score = 222 bits (568), Expect = 9e-57, Method: Composition-based stats. Identities = 58/144 (40%), Positives = 86/144 (59%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 5 FFMQQALEEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 65 QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ S ++++ FF+ R Sbjct: 125 CEVEAGLMEKESSEMLKSFFQNLR 148 >gi|78224707|ref|YP_386454.1| tRNA-adenosine deaminase [Geobacter metallireducens GS-15] gi|78195962|gb|ABB33729.1| tRNA-adenosine deaminase [Geobacter metallireducens GS-15] Length = 171 Score = 222 bits (568), Expect = 9e-57, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + +M AL EA+ AA R+E+P+GAV V N +I R N +D +AHAE++AIR Sbjct: 10 RDDSYWMGKALREAEKAAARDEVPIGAVVVRNGAVIGRGHNLRENKQDPSAHAEMIAIRQ 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L L LYVTLEPC MC AI LAR R+ +G +PKGG + Sbjct: 70 AARRLGCWRLTGCVLYVTLEPCLMCMGAIILARFDRVVFGCHDPKGGAAGSLYDLSDDRR 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ + E+ I+ FF + R Sbjct: 130 LNHRVELTSRVREEECSAILSGFFADLR 157 >gi|169830233|ref|YP_001716215.1| CMP/dCMP deaminase [Candidatus Desulforudis audaxviator MP104C] gi|169637077|gb|ACA58583.1| CMP/dCMP deaminase, zinc-binding [Candidatus Desulforudis audaxviator MP104C] Length = 156 Score = 222 bits (568), Expect = 9e-57, Method: Composition-based stats. Identities = 55/146 (37%), Positives = 80/146 (54%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL EA+ A + E+PVGAV V + II R N D +AHAE+LA+R Sbjct: 10 HAGYMREALREAEKAYAKGEVPVGAVVVQDGTIIGRGHNLREADNDASAHAELLAMRQAA 69 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 ++ L +YVT+EPC MCA A+ R+RR+ YG ++PK G + + + Sbjct: 70 QVSGDWRLSGATVYVTMEPCPMCAGALVQFRVRRVVYGTADPKAGAAGSVVELLREPRFN 129 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ PG+ E R+I+Q FF+ R Sbjct: 130 HQVEVIPGVLEAECREIVQRFFRALR 155 >gi|146319707|ref|YP_001199419.1| cytosine/adenosine deaminase [Streptococcus suis 05ZYH33] gi|253752698|ref|YP_003025839.1| deaminase [Streptococcus suis SC84] gi|253754524|ref|YP_003027665.1| deaminase [Streptococcus suis P1/7] gi|253756457|ref|YP_003029597.1| deaminase [Streptococcus suis BM407] gi|145690513|gb|ABP91019.1| Cytosine/adenosine deaminase [Streptococcus suis 05ZYH33] gi|251816987|emb|CAZ52636.1| putative deaminase [Streptococcus suis SC84] gi|251818921|emb|CAZ56764.1| putative deaminase [Streptococcus suis BM407] gi|251820770|emb|CAR47532.1| putative deaminase [Streptococcus suis P1/7] gi|292559319|gb|ADE32320.1| Cytosine/adenosine deaminase [Streptococcus suis GZ1] gi|319759114|gb|ADV71056.1| cytosine/adenosine deaminase [Streptococcus suis JS14] Length = 173 Score = 222 bits (568), Expect = 9e-57, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 85/148 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM+ AL+EA+ + ++EIP+G V V + +II R N EL HAE++AI+ Sbjct: 6 EEKEYFMTQALQEARKSLEKDEIPIGCVIVKDGQIIGRGHNAREELNQAIMHAEVMAIQE 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L + L+VT+EPC MC+ AI LARI ++ YGA+N K G + T Sbjct: 66 ANNVEGNWRLLDSTLFVTIEPCVMCSGAIGLARIPQVIYGATNKKFGAAGSLYDILTDER 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ GI E I+QDFF++RR Sbjct: 126 LNHRVKVETGILEAECANIMQDFFRQRR 153 >gi|291562950|emb|CBL41766.1| Cytosine/adenosine deaminases [butyrate-producing bacterium SS3/4] Length = 186 Score = 222 bits (568), Expect = 9e-57, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+ +A+ AA E+P+G V V + +II+R NR K+V AHAEI+A+R Sbjct: 10 MTIEEHYMKEAIRQAKKAAALKEVPIGCVIVYDGRIIARGYNRRTVDKNVLAHAEIIAMR 69 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CRIL L +YVTLEPC MCA AI ARI ++ G NPK G + Sbjct: 70 RACRILGDWRLEGCTMYVTLEPCPMCAGAIVQARIPKVVIGCMNPKAGCAGSVLDMLHED 129 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E G+ Q+++DFFK R Sbjct: 130 GFNHQVETEVGLLGDECSQMLKDFFKALR 158 >gi|217966083|ref|YP_002351761.1| tRNA-specific adenosine deaminase [Listeria monocytogenes HCC23] gi|217335353|gb|ACK41147.1| tRNA-specific adenosine deaminase [Listeria monocytogenes HCC23] gi|307572307|emb|CAR85486.1| tRNA-specific adenosine deaminase, putative [Listeria monocytogenes L99] Length = 156 Score = 222 bits (568), Expect = 9e-57, Method: Composition-based stats. Identities = 58/144 (40%), Positives = 87/144 (60%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 5 FFMQQALEEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 65 QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ S ++++ FF++ R Sbjct: 125 CEVEAGLMEKESSEMLKSFFQDLR 148 >gi|152971415|ref|YP_001336524.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150956264|gb|ABR78294.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 172 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 10 NDEYWMRHALTLAKRAWEEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 69 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI RL +GA + K G + Sbjct: 70 GLVLQNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLMDVLHHPGM 129 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + ++ DFF+ RR Sbjct: 130 NHRVEISEGVLAESCSAMLSDFFRWRR 156 >gi|304558173|gb|ADM40837.1| tRNA-specific adenosine-34 deaminase [Edwardsiella tarda FL6-60] Length = 170 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 83/148 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + +M AL+ A+ A + E+PVGAV VLN+++I NR D TAHAEI+A++ Sbjct: 4 RDDSDWMRHALQLAEKARAQGEVPVGAVLVLNDRVIGEGWNRPITRHDPTAHAEIMALQQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G I+ L E LYVTLEPC MCA A+ +RIRRL YGA + K G + Sbjct: 64 GGAIMQNYRLLEATLYVTLEPCVMCAGAMVHSRIRRLVYGAPDLKTGAAGSLLDVLGHPG 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + DFF++RR Sbjct: 124 MNHRIEVCGGVLADACAAQLSDFFRQRR 151 >gi|295702259|ref|YP_003595334.1| tRNA-specific adenosine deaminase [Bacillus megaterium DSM 319] gi|294799918|gb|ADF36984.1| tRNA-specific adenosine deaminase [Bacillus megaterium DSM 319] Length = 156 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A++EA A + E+P+GAV V N+++++ A N + AHAE+LAI Sbjct: 1 MLNDEKYMRLAIDEALKAKDKLEVPIGAVIVQNDEVVASAYNLRETEQRSVAHAELLAID 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + LYVTLEPC MCA AI L+R++R+ +GA +PKGG Sbjct: 61 EACKKLRTWRLEDATLYVTLEPCPMCAGAIVLSRVKRVVFGAYDPKGGCAGTLLNLLKFE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ FF+E R Sbjct: 121 KFNHQAEVVGGMLEEECGSLLTTFFRELR 149 >gi|255023462|ref|ZP_05295448.1| tRNA-specific adenosine deaminase [Listeria monocytogenes FSL J1-208] Length = 156 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 58/144 (40%), Positives = 88/144 (61%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 5 FFMQQALEEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 65 QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ S +++++FF++ R Sbjct: 125 CEVEAGLMEKESSEMLKNFFQDLR 148 >gi|224498434|ref|ZP_03666783.1| hypothetical protein LmonF1_01565 [Listeria monocytogenes Finland 1988] Length = 156 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 59/144 (40%), Positives = 86/144 (59%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 5 FFMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 65 QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E S ++++ FF+E R Sbjct: 125 CEVEAGLMESESSEMLKSFFQELR 148 >gi|194469725|ref|ZP_03075709.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197248207|ref|YP_002147526.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|200387835|ref|ZP_03214447.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205358526|ref|ZP_02657204.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205359943|ref|ZP_02833442.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194456089|gb|EDX44928.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197211910|gb|ACH49307.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|199604933|gb|EDZ03478.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205333662|gb|EDZ20426.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205341963|gb|EDZ28727.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] Length = 172 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G Sbjct: 7 DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 67 GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I G+ ++ DFF+ RR Sbjct: 127 NHRVDIIEGVLRDECATLLSDFFRMRR 153 >gi|281179608|dbj|BAI55938.1| putative deaminase [Escherichia coli SE15] Length = 178 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 56/145 (38%), Positives = 77/145 (53%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A+ A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 20 EYWMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGL 79 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 ++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 80 VMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNH 139 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 EI GI ++ DFF+ RR Sbjct: 140 RVEITEGILADECAALLSDFFRMRR 164 >gi|126175184|ref|YP_001051333.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS155] gi|125998389|gb|ABN62464.1| tRNA-adenosine deaminase [Shewanella baltica OS155] Length = 175 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 74/148 (50%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A+ A+ A E+PVGAV V + + I+ N + D +AHAEIL +R Sbjct: 11 EQDEQWMQVAMLMAEKAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLRE 70 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G Sbjct: 71 AGRLVENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHPA 130 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + FFK RR Sbjct: 131 FNHQVEVTSGVLADACSAQLSRFFKRRR 158 >gi|284046792|ref|YP_003397132.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM 14684] gi|283951013|gb|ADB53757.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM 14684] Length = 154 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 51/147 (34%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M A+ EA A +++PVGAV V + ++++ N +D TAHAE +A+R Sbjct: 8 RDEYYMRLAMREADRALEHDDVPVGAVVVHDGEVVATGHNERELRQDPTAHAEAIALREA 67 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L + + LYVTLEPC MCA AI LAR+ R+ +G +PK G + Sbjct: 68 ARHLGSWRVLDTVLYVTLEPCAMCAGAIVLARVPRVVFGTWDPKAGAAGSVLDVLDQPQL 127 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ ++ FF RR Sbjct: 128 NHRPEVDGGLLADECAAQLRAFFASRR 154 >gi|147676360|ref|YP_001210575.1| cytosine/adenosine deaminases [Pelotomaculum thermopropionicum SI] gi|146272457|dbj|BAF58206.1| cytosine/adenosine deaminases [Pelotomaculum thermopropionicum SI] Length = 156 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 63/147 (42%), Positives = 81/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL EA+ A E+PVGAV V + +II R N LKD TAHAEILA+R Sbjct: 5 NHAGYMREALAEAKKAYGLGEVPVGAVVVRDGEIIGRGHNLRETLKDSTAHAEILAMREA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 RI+ L LY T+EPC MCA AI R+ L YGA++PK G + Sbjct: 65 ARIVGDWRLNGTVLYSTIEPCAMCAGAIIQFRVATLVYGAADPKAGAAGSVIDVIGQPRF 124 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ R+IIQ FF+E R Sbjct: 125 NHRVEVVSGVLEEECREIIQKFFRELR 151 >gi|194445660|ref|YP_002041831.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194404323|gb|ACF64545.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 172 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G Sbjct: 7 DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 67 GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ ++ DFF+ RR Sbjct: 127 NHRVEIIEGVLRDECATLLSDFFRMRR 153 >gi|321313686|ref|YP_004205973.1| tRNA specific adenosine deaminase [Bacillus subtilis BSn5] gi|320019960|gb|ADV94946.1| tRNA specific adenosine deaminase [Bacillus subtilis BSn5] Length = 161 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 84/148 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + ++M A++EA+ A + E+P+GAV V+N++II+RA N + AHAE+L + Sbjct: 1 MTQDELYMKEAIKEAKKAEEKGEVPIGAVLVVNDEIIARAHNLRETEQRSIAHAEMLVMD 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG Sbjct: 61 EACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGAFDPKGGCSGTLMNLLQEE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKER 148 +H E+ G+ E+ ++ FF+E Sbjct: 121 RFNHQAEVVSGVLEEECGGMLSAFFREL 148 >gi|54307981|ref|YP_129001.1| putative cytosine/adenosine deaminase [Photobacterium profundum SS9] gi|46912407|emb|CAG19199.1| Putative cytosine/adenosine deaminase [Photobacterium profundum SS9] Length = 171 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 52/146 (35%), Positives = 80/146 (54%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A+E A A E+PVGAV V N +++ NR+ D TAHAE++A+R Sbjct: 10 DEQYMRRAIELASQAEAEGEVPVGAVVVYNGQVVGEGWNRSIGQHDATAHAEMMALRQAG 69 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 +++ L + LYVTLEPC MCA A+ +RI ++ +GAS+ K G + + + Sbjct: 70 KVVQNYRLLDATLYVTLEPCPMCAGAMVHSRIGKVIFGASDLKTGAAGSVMNLLSYDEVN 129 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ ++ R +Q FFK RR Sbjct: 130 HHVDCQSGVLDEECRAQLQAFFKRRR 155 >gi|292489080|ref|YP_003531967.1| tRNA-specific adenosine deaminase [Erwinia amylovora CFBP1430] gi|291554514|emb|CBA22074.1| tRNA-specific adenosine deaminase [Erwinia amylovora CFBP1430] Length = 159 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV VL+N++I NR D TAHAE++A+R G Sbjct: 5 NDEYWMRHALRLARRAWDEGEVPVGAVLVLDNQVIGEGWNRPIGHHDPTAHAEMMALRQG 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +++ L + LYVTLEPC MCA A+ +RI RL YGA + K G + Sbjct: 65 GKMIENYRLLDTTLYVTLEPCVMCAGAMIHSRIGRLVYGARDAKTGAAGSLLDVLGHPGM 124 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ ++ DFF++RR Sbjct: 125 NHQVPAECGLLNDECAAMLSDFFRQRR 151 >gi|322620458|gb|EFY17323.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625074|gb|EFY21903.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629482|gb|EFY26258.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322639849|gb|EFY36528.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644265|gb|EFY40809.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649957|gb|EFY46377.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322658212|gb|EFY54478.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|323200394|gb|EFZ85475.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201294|gb|EFZ86361.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208364|gb|EFZ93304.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323221772|gb|EGA06180.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323245221|gb|EGA29222.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248795|gb|EGA32722.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323259073|gb|EGA42721.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261995|gb|EGA45560.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267779|gb|EGA51260.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] Length = 172 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G Sbjct: 7 DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA AI +RI R+ +GA + K G + Sbjct: 67 GLVLQNYRLLDTTLYVTLEPCVMCAGAIVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I G+ ++ DFF+ RR Sbjct: 127 NHRVDIIEGVLRDECATLLSDFFRMRR 153 >gi|283796876|ref|ZP_06346029.1| tRNA-specific adenosine deaminase [Clostridium sp. M62/1] gi|291075284|gb|EFE12648.1| tRNA-specific adenosine deaminase [Clostridium sp. M62/1] Length = 215 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 78/149 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + +M A+ +A+ A E+P+G V V KII R NR +V AHAEILAIR Sbjct: 40 LTEDERYMREAVRQAKKAWALGEVPIGCVIVHRGKIIGRGYNRRTTDGNVLAHAEILAIR 99 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CRI+ L E +YVTLEPC MCA AI ARI ++ G NPK G + Sbjct: 100 KACRIIGDWRLEECTMYVTLEPCPMCAGAIVQARIPKVVIGCMNPKAGCAGSVLDLLHEE 159 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E G + ++++FF+E R Sbjct: 160 GFNHQAETEVGTLGEECSSMLKEFFRELR 188 >gi|194468109|ref|ZP_03074095.1| CMP/dCMP deaminase zinc-binding [Lactobacillus reuteri 100-23] gi|194452962|gb|EDX41860.1| CMP/dCMP deaminase zinc-binding [Lactobacillus reuteri 100-23] Length = 170 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 59/152 (38%), Positives = 90/152 (59%), Gaps = 7/152 (4%) Query: 1 MKKGN-------VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAH 53 MKK N FM A+ EA+ A + +E+P+GA+ V + ++I N + +DVT H Sbjct: 1 MKKNNSSLSEQQKFMKMAIAEAKQARILDEVPIGAIVVHDGQVIGCGHNMREKFQDVTYH 60 Query: 54 AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 AE+LAI C L L + DLYVTLEPC MC+ AI ARI+ +YYGA++PK G +++ Sbjct: 61 AEMLAIMEACTNLESWRLEDCDLYVTLEPCIMCSGAIINARIKNVYYGATDPKAGAVDSL 120 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + + +H ++ GI E Q++++FF Sbjct: 121 YHLLSDSRLNHQVNVHSGILEDECSQMLKNFF 152 >gi|288934060|ref|YP_003438119.1| CMP/dCMP deaminase zinc-binding protein [Klebsiella variicola At-22] gi|288888789|gb|ADC57107.1| CMP/dCMP deaminase zinc-binding protein [Klebsiella variicola At-22] Length = 169 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 7 NDEYWMRHALTLAKRAWEEGEVPVGAVLVYNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L + LYVTLEPC MCA A+ +RI RL +GA + K G + Sbjct: 67 GLVQQNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLIDVLHHPGM 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + ++ DFF+ RR Sbjct: 127 NHRVEISEGVLAESCSTMLSDFFRWRR 153 >gi|161612662|ref|YP_001586627.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161362026|gb|ABX65794.1| hypothetical protein SPAB_00358 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 172 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G Sbjct: 7 DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 67 GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ ++ DFF+ RR Sbjct: 127 NHRVEIIEGVLRDECATLLSDFFRMRR 153 >gi|254830845|ref|ZP_05235500.1| hypothetical protein Lmon1_05774 [Listeria monocytogenes 10403S] Length = 156 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 59/144 (40%), Positives = 86/144 (59%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 5 FFMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 65 QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E S ++++ FF+E R Sbjct: 125 CEVEAGLMESESSEMLKSFFQELR 148 >gi|322834117|ref|YP_004214144.1| CMP/dCMP deaminase zinc-binding protein [Rahnella sp. Y9602] gi|321169318|gb|ADW75017.1| CMP/dCMP deaminase zinc-binding protein [Rahnella sp. Y9602] Length = 180 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 79/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+ A A E+PVGAV VL+N++I NR+ D TAHAEI+A+R Sbjct: 9 MNDDEHWMRQAMNLALKAQDEGEVPVGAVLVLDNQVIGEGWNRSIGHHDPTAHAEIMALR 68 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 G + L LYVTLEPC MCA A+ +RIRR+ YGA++ K G + Sbjct: 69 QGGNAVQNYRLLNATLYVTLEPCVMCAGAMIHSRIRRVVYGAADAKTGAAGSLLDVLRHP 128 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + + + FF+ RR Sbjct: 129 GMNHQVEITAGVLAEACSEQLSAFFRFRR 157 >gi|319427113|gb|ADV55187.1| CMP/dCMP deaminase zinc-binding protein [Shewanella putrefaciens 200] Length = 169 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 3/152 (1%) Query: 1 MKK---GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M++ +M A++ A+ A E+PVGAV V + + I+ N + D +AHAEIL Sbjct: 1 MEQTELDEYWMQVAMQMAEKAEAAGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEIL 60 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 +R + L L + LY+TLEPC MCA A+ +RI R+ YGA + K G Sbjct: 61 CLRSAGKKLENYRLLDATLYITLEPCAMCAGAMVHSRIARVVYGARDEKTGAAGTVVNLL 120 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + + FFK RR Sbjct: 121 QHPAFNHQVEVTSGVLAEACSAQLSRFFKRRR 152 >gi|292900205|ref|YP_003539574.1| tRNA-specific adenosine deaminase [Erwinia amylovora ATCC 49946] gi|291200053|emb|CBJ47178.1| tRNA-specific adenosine deaminase [Erwinia amylovora ATCC 49946] Length = 164 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV VL+N++I NR D TAHAE++A+R G Sbjct: 10 NDEYWMRHALRLARRAWDEGEVPVGAVLVLDNQVIGEGWNRPIGHHDPTAHAEMMALRQG 69 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +++ L + LYVTLEPC MCA A+ +RI RL YGA + K G + Sbjct: 70 GKMIENYRLLDTTLYVTLEPCVMCAGAMIHSRIGRLVYGARDAKTGAAGSLLDVLGHPGM 129 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ ++ DFF++RR Sbjct: 130 NHQVPAECGLLNDECAAMLSDFFRQRR 156 >gi|315284032|ref|ZP_07872011.1| tRNA-specific adenosine deaminase [Listeria marthii FSL S4-120] gi|313612324|gb|EFR86487.1| tRNA-specific adenosine deaminase [Listeria marthii FSL S4-120] Length = 156 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 59/144 (40%), Positives = 86/144 (59%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 5 FFMQQALEEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 65 QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E S ++++ FF+E R Sbjct: 125 CEVEAGLMEAESSEMLKSFFQELR 148 >gi|228478058|ref|ZP_04062669.1| tRNA-specific adenosine deaminase [Streptococcus salivarius SK126] gi|228250238|gb|EEK09491.1| tRNA-specific adenosine deaminase [Streptococcus salivarius SK126] Length = 172 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 87/148 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ + FMS AL+EA+ + + EIP+G V V + +++ R N EL HAE++AI+ Sbjct: 7 EEKDFFMSEALKEAEKSLDKAEIPIGCVIVKDGEVVGRGHNAREELNQAIMHAEVMAIQE 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + L + L+VT+EPC MC+ AI LARI ++ YGASN K GG + Sbjct: 67 ANRTVGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGASNQKFGGAGSLYDILRDER 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ +I+QDFF++ R Sbjct: 127 LNHRVEVETGVMEEECAKIMQDFFRQSR 154 >gi|91201429|emb|CAJ74489.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 158 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 61/144 (42%), Positives = 81/144 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM A++EA+ AA NE+PVGAV V +N+II+RA N+ LKD TAHAE++AI Sbjct: 8 SNHEYFMRQAIKEAEKAADINEVPVGAVIVYDNRIIARAHNQREMLKDPTAHAEMIAITQ 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G L L +YVTLEPC MCA A+ +RI +L YGA + K G + Sbjct: 68 GAEYLQNWRLTGSTIYVTLEPCVMCAGALVQSRIDKLVYGAVDKKAGACVSVMNLVQNTK 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 +H E+ P I R I++ FF Sbjct: 128 LNHRLEVIPDILADECRDILKRFF 151 >gi|238896010|ref|YP_002920746.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae NTUH-K2044] gi|238548328|dbj|BAH64679.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 180 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 18 NDEYWMRHALTLAKRAWEEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI RL +GA + K G + Sbjct: 78 GLVLQNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLMDVLHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + ++ DFF+ RR Sbjct: 138 NHRVEISEGVLAESCSAMLSDFFRWRR 164 >gi|163802511|ref|ZP_02196404.1| molecular chaperone DnaK [Vibrio sp. AND4] gi|159173812|gb|EDP58627.1| molecular chaperone DnaK [Vibrio sp. AND4] Length = 178 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+E A+ A E+PVGAV V + KII+ NR+ D TAHAEI +R Sbjct: 9 QDERFMRRAMELAEQAEAEGEVPVGAVLVKDGKIIAEGWNRSICSHDATAHAEIQTLRKA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L + LYVTLEPC MCA A+ +R++R+ YGA + K G + Sbjct: 69 GETLGNYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVYGAPDLKAGAAGTVLNLFESQAA 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E R +Q FFK RR Sbjct: 129 YHYATVESGLLENECRTQLQAFFKRRR 155 >gi|293394841|ref|ZP_06639131.1| tRNA-specific adenosine deaminase [Serratia odorifera DSM 4582] gi|291422592|gb|EFE95831.1| tRNA-specific adenosine deaminase [Serratia odorifera DSM 4582] Length = 179 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL A A E+PVGA+ VL+N++I NR D TAHAEI+A+R G Sbjct: 16 NDDYWMRQALTLALRAQEEGEVPVGALLVLDNQVIGEGWNRPIGRHDPTAHAEIMALRQG 75 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L LYVTLEPC MCA A+ +RIRRL YGAS+ K G + Sbjct: 76 GAVLQNYRLLNATLYVTLEPCVMCAGAMVHSRIRRLVYGASDEKTGAAGSLVDILRHPGM 135 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I G+ + + +FF+ RR Sbjct: 136 NHQVDITAGVLAEECAATLSNFFRLRR 162 >gi|88858578|ref|ZP_01133220.1| hypothetical protein PTD2_14349 [Pseudoalteromonas tunicata D2] gi|88820195|gb|EAR30008.1| hypothetical protein PTD2_14349 [Pseudoalteromonas tunicata D2] Length = 165 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK +M AL A A EIPVGA+ V ++II+ NR+ D +AHAE+LAIR Sbjct: 1 MKSDEYWMQQALLRADKAEAEGEIPVGAIVVYQDEIIAEGWNRSIISHDPSAHAEMLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + + LYVTLEPC MCA A+ +R++R+ YGA + K G +++ + Sbjct: 61 NAGIALQNYRMIDCTLYVTLEPCAMCAGALVHSRMKRVVYGADDLKTGAVKSVMNIVQHS 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ Q + FFK RR Sbjct: 121 QFNHQLEVTEGVLAQECGLRLSAFFKRRR 149 >gi|330833669|ref|YP_004402494.1| cytosine/adenosine deaminase [Streptococcus suis ST3] gi|329307892|gb|AEB82308.1| cytosine/adenosine deaminase [Streptococcus suis ST3] Length = 173 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 85/148 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM+ AL+EA+ + ++EIP+G V V + +II R N EL HAE++AI+ Sbjct: 6 EEKEYFMTQALQEARKSLEKDEIPIGCVIVKDGQIIGRGHNAREELNQAIMHAEVMAIQE 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L + L+VT+EPC MC+ AI LARI ++ YGA+N K G + T Sbjct: 66 ANNVEGNWRLLDSTLFVTIEPCVMCSGAIGLARIPQVIYGATNKKFGAAGSLYDILTDER 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ GI E I+QDFF++RR Sbjct: 126 LNHRVKVETGILEAECANIMQDFFRQRR 153 >gi|313631569|gb|EFR98838.1| tRNA-specific adenosine deaminase [Listeria seeligeri FSL N1-067] Length = 156 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 58/144 (40%), Positives = 83/144 (57%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL EA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C Sbjct: 5 FFMQQALVEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACNH 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 65 QKSWRLSGAELYVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E S ++++ FF+E R Sbjct: 125 CEVESGLMEAESSEMLKSFFQELR 148 >gi|307267454|ref|ZP_07548942.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter wiegelii Rt8.B1] gi|306917535|gb|EFN47821.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter wiegelii Rt8.B1] Length = 148 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 57/145 (39%), Positives = 82/145 (56%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM A+ EA+ + E+PVGAV V + +II + N+ D TAHAEILAI+ C+ Sbjct: 3 NRFMEAAILEAKKSYQLGEVPVGAVIVKDGQIIGKGFNQKESSNDATAHAEILAIKEACK 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + +YVTLEPC MCA AI +RI+R+Y GA + + G + Sbjct: 63 TLGSWRLDDCSMYVTLEPCPMCAGAILESRIKRVYIGAESERTGAAGTVVDILNNSYLGS 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+Y GI E+ + +++DFF+ R Sbjct: 123 KTEVYFGIMEEECKTLLKDFFENLR 147 >gi|206578910|ref|YP_002237098.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae 342] gi|206567968|gb|ACI09744.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae 342] Length = 180 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 18 NDEYWMRHALTLAKRAWKEGEVPVGAVLVYNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI RL +GA + K G + Sbjct: 78 GLVLQNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLIDVLHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + ++ DFF+ RR Sbjct: 138 NHRVEISEGVLAESCSTMLSDFFRWRR 164 >gi|47092339|ref|ZP_00230130.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes str. 4b H7858] gi|226225270|ref|YP_002759377.1| hypothetical protein Lm4b_02693 [Listeria monocytogenes Clip81459] gi|254824916|ref|ZP_05229917.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL J1-194] gi|255520888|ref|ZP_05388125.1| hypothetical protein LmonocFSL_06656 [Listeria monocytogenes FSL J1-175] gi|47019318|gb|EAL10060.1| cytidine/deoxycytidylate deaminase family protein [Listeria monocytogenes str. 4b H7858] gi|225877732|emb|CAS06447.1| Conserved hypothetical proteins [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293594156|gb|EFG01917.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL J1-194] gi|328468199|gb|EGF39205.1| hypothetical protein LM1816_02662 [Listeria monocytogenes 1816] Length = 156 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 58/144 (40%), Positives = 87/144 (60%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALEEA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 5 FFMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 65 QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ S ++++ FF++ R Sbjct: 125 CEVEAGLMEKESSEMLRSFFQDLR 148 >gi|290508256|ref|ZP_06547627.1| tRNA-specific adenosine deaminase yfhC [Klebsiella sp. 1_1_55] gi|289777650|gb|EFD85647.1| tRNA-specific adenosine deaminase yfhC [Klebsiella sp. 1_1_55] Length = 180 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 18 NDEYWMRHALTLAKRAWEEGEVPVGAVLVYNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI RL +GA + K G + Sbjct: 78 GLVLQNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLIDVLHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + ++ DFF+ RR Sbjct: 138 NHRVEISEGVLAESCSTMLSDFFRWRR 164 >gi|282600107|ref|ZP_05973017.2| tRNA-specific adenosine deaminase [Providencia rustigianii DSM 4541] gi|282566416|gb|EFB71951.1| tRNA-specific adenosine deaminase [Providencia rustigianii DSM 4541] Length = 176 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M+ A+E A+ A EIPVGA+ V +N++I+ N + E D TAHAEI+ ++ Sbjct: 13 LEIDEYWMAQAIELAKQAQDIGEIPVGALLVKDNQLIATGWNHSIEQHDPTAHAEIITLQ 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +IL L + LYVTLEPC MCA A+ +RI R+ YGA + K G + A Sbjct: 73 QAGKILKNYRLLDTTLYVTLEPCIMCAGAMIHSRIGRVVYGAKDFKTGACGSFINIMGQA 132 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ GI E ++ FFK RR Sbjct: 133 GLNHYVDVTGGILEDVCSSMLSAFFKMRR 161 >gi|300214872|gb|ADJ79288.1| Cytosine/adenosine deaminase [Lactobacillus salivarius CECT 5713] Length = 166 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 57/144 (39%), Positives = 78/144 (54%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL EA+ AA E+P+G V V + KII R N ++ T HAE+LAI Sbjct: 10 KFMKEALFEAKLAAKIGEVPIGCVIVKDGKIIGRGHNLREHSQNATLHAEMLAIEEANET 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 ++ L + L+VTLEPC MC+ AI +RI +YYGAS+PK G + + +H Sbjct: 70 VNSWRLVDTQLFVTLEPCPMCSGAIINSRIPEVYYGASDPKAGTVGTLMNLLEDSRFNHQ 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI E I++DFFK R Sbjct: 130 SFVEKGILENECASILKDFFKSIR 153 >gi|268318938|ref|YP_003292594.1| hypothetical protein FI9785_445 [Lactobacillus johnsonii FI9785] gi|262397313|emb|CAX66327.1| conserved hypothetical proteins [Lactobacillus johnsonii FI9785] Length = 160 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 89/149 (59%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M A E+A+ A + E+P+GAV V + +I NR +D T HAE++AIR Sbjct: 5 EQKEKYMHLAFEQAKKAEEQGEVPIGAVVVDKDGNVIGEGYNRRELDEDATQHAEMIAIR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L+ L + L++TLEPC MC+ AI +R+ +YYGA +PK G + + + Sbjct: 65 QACKKLNSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAAGSVIDLFKVE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P+IY G+ ++ Q+++DFF+E R Sbjct: 125 KFNHHPKIYGGLFRNQAAQMLKDFFREIR 153 >gi|89073121|ref|ZP_01159660.1| Putative cytosine/adenosine deaminase [Photobacterium sp. SKA34] gi|89051074|gb|EAR56531.1| Putative cytosine/adenosine deaminase [Photobacterium sp. SKA34] Length = 175 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A+E A A E+PVGAV V N +++ NR+ D TAHAEI+A+R Sbjct: 8 QNDEHFMRRAIELAAKAEEEGEVPVGAVVVYNGRVVGEGWNRSIGQHDATAHAEIMALRQ 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 ++L L + LYVTLEPC MCA A+ R+ ++ YGA + K G + + Sbjct: 68 AGKVLENYRLIDTTLYVTLEPCPMCAGAMVHCRVGKVVYGADDLKTGAAGSTMNLLSYDG 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E G+ + R +Q FFK RR Sbjct: 128 VNHHVEQTSGVLVEECRAQLQAFFKRRR 155 >gi|209886356|ref|YP_002290213.1| tRNA-specific adenosine deaminase [Oligotropha carboxidovorans OM5] gi|209874552|gb|ACI94348.1| tRNA-specific adenosine deaminase [Oligotropha carboxidovorans OM5] Length = 181 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 78/143 (54%), Positives = 99/143 (69%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +AQNA E+P+G V V N +I+ AGNR +D TAHAE+LA+R L Sbjct: 39 FMDLALRQAQNAEANGEVPIGCVVVQNGTVIAAAGNRTITDRDPTAHAEMLALREAASKL 98 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 +E L + DLYVTLEPCTMCA AIS ARIRRLYYGA +PKGG I++G +F+ TCHH P Sbjct: 99 GRERLADCDLYVTLEPCTMCAGAISHARIRRLYYGALDPKGGAIDSGVRFFAQPTCHHVP 158 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y + E + +++DFFK RR Sbjct: 159 EVYSAVGEAEAAALLRDFFKTRR 181 >gi|260437836|ref|ZP_05791652.1| tRNA-specific adenosine deaminase [Butyrivibrio crossotus DSM 2876] gi|292809861|gb|EFF69066.1| tRNA-specific adenosine deaminase [Butyrivibrio crossotus DSM 2876] Length = 157 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM A+ +A+ A NE+P+G V V + KII+R NR K AHAEI+AI+ Sbjct: 1 MTENEGFMKEAIRQAKKAEKLNEVPIGCVIVYDGKIIARGYNRRNTDKSTLAHAEIIAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +++ L + LYVTLEPC MCA AI ARI ++ G N K G + + Sbjct: 61 RASKVIKDWRLEDCTLYVTLEPCQMCAGAIVQARIPKVVIGTMNSKAGCAGSVINVLQMK 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I G+ ++++Q+FF+ R Sbjct: 121 EFNHQVDICKGVLADECKEMMQNFFRNLR 149 >gi|198245375|ref|YP_002216635.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197939891|gb|ACH77224.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 172 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G Sbjct: 7 DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 67 GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I G+ ++ DFF+ RR Sbjct: 127 NHRVDIIEGVLRDECATLLSDFFRMRR 153 >gi|225569894|ref|ZP_03778919.1| hypothetical protein CLOHYLEM_05989 [Clostridium hylemonae DSM 15053] gi|225161364|gb|EEG73983.1| hypothetical protein CLOHYLEM_05989 [Clostridium hylemonae DSM 15053] Length = 159 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 54/146 (36%), Positives = 72/146 (49%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM A+++A A NE P+G V V +II R NR K+ AHAEI AIR Sbjct: 5 DEKFMKEAIKQAGKAYALNETPIGCVIVYEGRIIGRGYNRRNTDKNTLAHAEITAIRKAS 64 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R + L LYVTLEPC MCA AI +R+ R+ G NPK G + + Sbjct: 65 RKMGDWRLEGCTLYVTLEPCPMCAGAIVQSRMDRVVVGCMNPKAGCAGSVLNVLQTEGFN 124 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ +++ FF+E R Sbjct: 125 HQTELTTGVCGGECSSMMKSFFRELR 150 >gi|116629038|ref|YP_814210.1| cytosine/adenosine deaminase [Lactobacillus gasseri ATCC 33323] gi|238853616|ref|ZP_04643985.1| tRNA-specific adenosine deaminase [Lactobacillus gasseri 202-4] gi|311111167|ref|ZP_07712564.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus gasseri MV-22] gi|116094620|gb|ABJ59772.1| tRNA-adenosine deaminase [Lactobacillus gasseri ATCC 33323] gi|238833760|gb|EEQ26028.1| tRNA-specific adenosine deaminase [Lactobacillus gasseri 202-4] gi|311066321|gb|EFQ46661.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus gasseri MV-22] Length = 160 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 87/149 (58%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 K +M A +A+ A + E+P+GA+ V + +I NR +D T HAE++AIR Sbjct: 5 KDKEKYMQLAFAQAKKAEDQGEVPIGAIVVDKDGNVIGEGYNRRELDEDATQHAEMIAIR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + L++TLEPC MC+ AI +R+ +YYGA +PK G + + + Sbjct: 65 QACQNLGSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAAGSVIDLFKVE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P+++ G+ + ++ Q+++DFF+E R Sbjct: 125 KFNHHPKVFGGLFKDQAAQMLKDFFREIR 153 >gi|221067789|ref|ZP_03543894.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] gi|220712812|gb|EED68180.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] Length = 463 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 57/146 (39%), Positives = 82/146 (56%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM ALE+A+ AA E+PVGAV V + ++I R N +D TAHAE+LA+R Sbjct: 8 HEHFMRQALEQARCAAACGEVPVGAVVVKDGQVIGRGHNSPLSAQDPTAHAEVLALREAA 67 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R L L LYVTLEPCTMC+ A+ AR+ + YGA+ P+ G + + +T + Sbjct: 68 RTLGNYRLEGCTLYVTLEPCTMCSGAMLHARVDAVVYGAAEPRTGAAGSVLDVFGYSTIN 127 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ + +I +FF+ RR Sbjct: 128 HQTRVLRGVLAAQCSALIAEFFQLRR 153 >gi|325697330|gb|EGD39216.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK160] Length = 165 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 15 IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 74 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 75 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 134 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+QDFF++RR Sbjct: 135 RLNHRVEVETGVLQEECAQIMQDFFRQRR 163 >gi|269138128|ref|YP_003294828.1| tRNA-specific adenosine deaminase [Edwardsiella tarda EIB202] gi|267983788|gb|ACY83617.1| tRNA-specific adenosine deaminase [Edwardsiella tarda EIB202] Length = 180 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 83/148 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + +M AL+ A+ A + E+PVGAV VLN+++I NR D TAHAEI+A++ Sbjct: 14 RDDSDWMRHALQLAEKARAQGEVPVGAVLVLNDRVIGEGWNRPITRHDPTAHAEIMALQQ 73 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G I+ L E LYVTLEPC MCA A+ +RIRRL YGA + K G + Sbjct: 74 GGAIMQNYRLLEATLYVTLEPCVMCAGAMVHSRIRRLVYGAPDLKTGAAGSLLDVLGHPG 133 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + DFF++RR Sbjct: 134 MNHRIEVCGGVLADACAAQLSDFFRQRR 161 >gi|71280259|ref|YP_270337.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Colwellia psychrerythraea 34H] gi|71145999|gb|AAZ26472.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Colwellia psychrerythraea 34H] Length = 182 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 55/142 (38%), Positives = 72/142 (50%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM A E AQ A +EIPVGAV V KII N++ L D ++HAE+ AIR Sbjct: 22 DLTFMRRAFELAQQAEQHDEIPVGAVVVHQGKIIGEGFNQSIMLNDPSSHAEMNAIRQAG 81 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L+ L + LYVTLEPC MCA + +RI RL Y S+ K G + + Sbjct: 82 EFLNNYRLLDCTLYVTLEPCPMCAGLLVHSRINRLVYACSDLKTGAAGSAFNLVNNPQLN 141 Query: 124 HSPEIYPGISEQRSRQIIQDFF 145 H E+ I E+ Q++ FF Sbjct: 142 HQLEVCSNILEEECSQLLSAFF 163 >gi|295089886|emb|CBK75993.1| Cytosine/adenosine deaminases [Clostridium cf. saccharolyticum K10] Length = 214 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 78/149 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + +M A+ +A+ A E+P+G V V KII R NR +V AHAEILAIR Sbjct: 39 LTEDERYMREAVRQAKKAWALGEVPIGCVIVHRGKIIGRGYNRRTTDGNVLAHAEILAIR 98 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CRI+ L E +YVTLEPC MCA AI ARI ++ G NPK G + Sbjct: 99 KACRIIGDWRLEECTMYVTLEPCPMCAGAIVQARIPKVVIGCMNPKAGCAGSVLDLLHEE 158 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E G + ++++FF+E R Sbjct: 159 GFNHQAETEVGTLGEECSSMLKEFFRELR 187 >gi|42518517|ref|NP_964447.1| hypothetical protein LJ0422 [Lactobacillus johnsonii NCC 533] gi|41582802|gb|AAS08413.1| hypothetical protein LJ_0422 [Lactobacillus johnsonii NCC 533] Length = 160 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 89/149 (59%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M A E+A+ A + E+P+GAV V + +I NR +D T HAE++AIR Sbjct: 5 EQKEKYMHLAFEQAKKAEEQGEVPIGAVVVDKDGNVIGEGYNRRELDEDATQHAEMIAIR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L+ L + L++TLEPC MC+ AI +R+ +YYGA +PK G + + + Sbjct: 65 QACKNLNSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAASSVIDLFKVE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P+IY G+ ++ Q+++DFF+E R Sbjct: 125 KFNHHPKIYGGLFRDQAAQMLKDFFREIR 153 >gi|289435993|ref|YP_003465865.1| cytidine/deoxycytidylate deaminase family protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172237|emb|CBH28783.1| cytidine/deoxycytidylate deaminase family protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 156 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 58/144 (40%), Positives = 83/144 (57%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL EA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C Sbjct: 5 FFMQQALVEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACNH 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 65 QKSWRLSGAELYVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E S ++++ FF+E R Sbjct: 125 CEVESGLMEAESSEMLKSFFQELR 148 >gi|261417404|ref|YP_003251087.1| CMP/dCMP deaminase zinc-binding protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373860|gb|ACX76605.1| CMP/dCMP deaminase zinc-binding protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 210 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 76/148 (51%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL +AQ A EIP+G V V + +I + N+ +LKD TAHAEI+AI Sbjct: 50 SEDEKFMRMALRQAQIAFDMKEIPIGCVIVKDGVVIGKGYNQVEQLKDATAHAEIIAIGT 109 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L LYVTLEPC MCA AI +R+ R+ YG+ + + GG T Sbjct: 110 AASTLDNWRLDGCTLYVTLEPCPMCAGAILNSRVSRIVYGSPDSRFGGCGTTIDVITGNA 169 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + E+ GI +++ FF++ R Sbjct: 170 LKRAVEVTGGILADECLGLLKGFFQQMR 197 >gi|270264772|ref|ZP_06193037.1| hypothetical protein SOD_i01890 [Serratia odorifera 4Rx13] gi|270041455|gb|EFA14554.1| hypothetical protein SOD_i01890 [Serratia odorifera 4Rx13] Length = 168 Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL AQ A E+PVGA+ VL+N++I NR D TAHAEI+A+R G Sbjct: 5 NDEYWMRQALLLAQRAQEEGEVPVGALLVLDNQVIGEGWNRPIGRHDPTAHAEIMALRQG 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L LYVTLEPC MCA A+ +RIRRL YGA++ K G + Sbjct: 65 GAVLQNYRLLNATLYVTLEPCVMCAGAMVHSRIRRLVYGAADVKTGAAGSLVDILRHPGM 124 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + +FF+ RR Sbjct: 125 NHQVEIASGVLADECAATLSNFFRLRR 151 >gi|120598186|ref|YP_962760.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. W3-18-1] gi|120558279|gb|ABM24206.1| tRNA-adenosine deaminase [Shewanella sp. W3-18-1] Length = 164 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 50/146 (34%), Positives = 73/146 (50%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A++ A+ A E+PVGAV V + + I+ N + D +AHAEIL +R Sbjct: 2 DEYWMQVAMQMAEKAEAAGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLRSAG 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L L + LY+TLEPC MCA A+ +RI R+ YGA + K G + Sbjct: 62 KKLENYRLLDATLYITLEPCAMCAGAMVHSRIARVVYGARDEKTGAAGTVVNLLQHPAFN 121 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ + + FFK RR Sbjct: 122 HQVEVTSGVLAEACSAQLSRFFKRRR 147 >gi|255659416|ref|ZP_05404825.1| tRNA-specific adenosine deaminase [Mitsuokella multacida DSM 20544] gi|260848379|gb|EEX68386.1| tRNA-specific adenosine deaminase [Mitsuokella multacida DSM 20544] Length = 169 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M++ +M ALEEAQ A E+P+GAV V ++++R N D TAHAE++AI Sbjct: 1 MQEDAYYMRLALEEAQKAYDLEEVPIGAVLVDREGEVVARGHNMREVWHDATAHAEMIAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R C + L + LYVT+EPC MCA AI ++R+ R+ YG+++ + G E+ Sbjct: 61 REACAKEGRWRLSGLTLYVTIEPCPMCAGAIVMSRVDRVVYGSTDARAGACESVFNIPGC 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ ++ I++ FFKERR Sbjct: 121 PALNHRPEMTAGVLQEECAGIMKRFFKERR 150 >gi|189426160|ref|YP_001953337.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ] gi|189422419|gb|ACD96817.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ] Length = 157 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + +M A+ EA+ A + E+P+G V V NN+II+RA N +D AHAE+LAIR Sbjct: 3 RTHDYWMDKAIAEARKAEVIAEVPIGCVIVQNNRIIARAHNLREAKQDPAAHAELLAIRK 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L L E LYVTLEPC MC AI LARI + +G +PK G + Sbjct: 63 AARKLGNWRLLETTLYVTLEPCLMCMGAILLARIPTVVFGCHDPKAGAAGSLYDLSNDPR 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI Q ++ +FF R Sbjct: 123 LNHRFELVSGIRRQECSSMLSEFFAALR 150 >gi|114562317|ref|YP_749830.1| CMP/dCMP deaminase, zinc-binding [Shewanella frigidimarina NCIMB 400] gi|114333610|gb|ABI70992.1| tRNA-adenosine deaminase [Shewanella frigidimarina NCIMB 400] Length = 189 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 77/146 (52%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A++ A+ A L+ E+PVGAV V ++ +I+ N + D TAHAE+ IR Sbjct: 32 DEKWMRLAMQLAEQAELKGEVPVGAVLVKDDVLIASGCNLSIVNHDPTAHAEMECIRQAG 91 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 ++L + + LYVTLEPCTMCA A+ +RI R+ YGA + K G + + Sbjct: 92 KVLENYRMLDTTLYVTLEPCTMCAGAMVHSRITRVVYGADDLKTGAAGSVINLLQHPVFN 151 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ + FF+ RR Sbjct: 152 HQLEVSSGVLAAECGAQLSAFFQRRR 177 >gi|326390318|ref|ZP_08211877.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter ethanolicus JW 200] gi|325993595|gb|EGD52028.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter ethanolicus JW 200] Length = 148 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 56/145 (38%), Positives = 81/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM A+ EA+ + E+PVGAV V + +II + N+ D T HAEILAI+ C+ Sbjct: 3 NRFMEAAILEAKKSYQLGEVPVGAVIVKDGQIIGKGFNQKESSNDATTHAEILAIKEACK 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + +YVTLEPC MCA AI +RI+R+Y GA + + G + Sbjct: 63 TLGSWRLDDCSMYVTLEPCPMCAGAILESRIKRVYIGAESERTGAAGTVVDILNNSYLGS 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+Y GI E+ + +++DFF+ R Sbjct: 123 KTEVYFGIMEEECKTLLKDFFENLR 147 >gi|320157222|ref|YP_004189601.1| tRNA-specific adenosine-34 deaminase [Vibrio vulnificus MO6-24/O] gi|319932534|gb|ADV87398.1| tRNA-specific adenosine-34 deaminase [Vibrio vulnificus MO6-24/O] Length = 181 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + VFM A+E A A E+PVGAV V + ++I+ N++ D TAHAEI +R Sbjct: 11 QDEVFMRRAIELAAIAESEGEVPVGAVLVKDGEVIAEGWNQSIGQHDATAHAEIQTLRQA 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + LYVTLEPC MCA A+ +R++R+ +GA + K G ++ Sbjct: 71 GQSLGNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLDLFSSQAA 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ E R +Q FFK RR Sbjct: 131 YHYATIEKGLLESECRDQLQAFFKRRR 157 >gi|322418061|ref|YP_004197284.1| CMP/dCMP deaminase zinc-binding protein [Geobacter sp. M18] gi|320124448|gb|ADW12008.1| CMP/dCMP deaminase zinc-binding protein [Geobacter sp. M18] Length = 162 Score = 220 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 1/150 (0%) Query: 1 MKK-GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 MKK + +M A+++A+ A E+P+GAV V + +I+R N +D AHAE++AI Sbjct: 1 MKKNDHYWMGKAIDQARKAESIGEVPIGAVIVKDGAVIARGHNLRESKQDPAAHAELIAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + LS L LYVTLEPCTMC AI L+R+ R+ +G+ +PKGG + F Sbjct: 61 RKAAKKLSSWRLTGATLYVTLEPCTMCMGAIILSRLDRVVFGSYDPKGGAAGSLFDFSDD 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +HS + PG+ + + ++ FF + R Sbjct: 121 KRLNHSVVLTPGVRGEETSSMLSCFFAKLR 150 >gi|227112728|ref|ZP_03826384.1| tRNA-specific adenosine deaminase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 168 Score = 220 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 78/149 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M AL AQ A E+PVGAV VL+N+ I NR D TAHAEI+A+R Sbjct: 4 LRNDEYWMRHALMLAQRAQDEGEVPVGAVLVLDNEAIGEGWNRPIGHHDPTAHAEIMALR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 G ++L L E LYVTLEPC MCA A+ +RI RL YGAS+ K G + Sbjct: 64 QGGQVLQNYRLLETTLYVTLEPCIMCAGAMVHSRIGRLVYGASDEKTGAAGSLVDILRHP 123 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I GI + FF+ RR Sbjct: 124 GMNHQIVIESGILADECSATLSTFFRLRR 152 >gi|153834810|ref|ZP_01987477.1| tRNA-specific adenosine deaminase [Vibrio harveyi HY01] gi|148868738|gb|EDL67812.1| tRNA-specific adenosine deaminase [Vibrio harveyi HY01] Length = 177 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +FM A+E A+ A E+PVGAV V + +II+ NR+ D TAHAEI +R Sbjct: 9 QDELFMRRAMELAEQAEAEGEVPVGAVLVKDGEIIAEGWNRSICAHDATAHAEIQTLRKA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + LYVTLEPC MCA A+ +R++R+ YGA + K G + Sbjct: 69 GKALGNYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVYGAPDLKAGAAGTVLNLFESQAA 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R +Q FFK RR Sbjct: 129 YHYATVENGLLEEECRSQLQAFFKRRR 155 >gi|229823590|ref|ZP_04449659.1| hypothetical protein GCWU000282_00889 [Catonella morbi ATCC 51271] gi|229787034|gb|EEP23148.1| hypothetical protein GCWU000282_00889 [Catonella morbi ATCC 51271] Length = 178 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 52/147 (35%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M ALE A A E+P+GA+ V + +++ A N TAHAE+LAI Sbjct: 14 QHEYWMQQALELADQAQALGEVPIGALLVKDGVLLASAYNLREVNHQATAHAELLAIEAA 73 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L LYVTLEPC MCA A+ L+R+ ++ YGAS+PKGG + + Sbjct: 74 NQALGAWRLEGCTLYVTLEPCPMCAGALVLSRVDQVVYGASDPKGGCAGSLMNLLEDSRF 133 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P++ G+ E + +++FF+ R Sbjct: 134 NHQPQVIRGVLEAQCSDKLKNFFQGLR 160 >gi|157150388|ref|YP_001449474.1| putative cytidine/deoxycytidylate deaminase [Streptococcus gordonii str. Challis substr. CH1] gi|157075182|gb|ABV09865.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus gordonii str. Challis substr. CH1] Length = 177 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 83/148 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL+EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 28 EEKEYFMLEALKEARIALENDEIPIGCVIVRDGQIIGRGHNAREELQRAVMHAEIMAIEE 87 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 88 ANHHENGWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDER 147 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+QDFF+ RR Sbjct: 148 LNHRVEVETGVLQEECAQIMQDFFRNRR 175 >gi|253996102|ref|YP_003048166.1| CMP/dCMP deaminase zinc-binding [Methylotenera mobilis JLW8] gi|253982781|gb|ACT47639.1| CMP/dCMP deaminase zinc-binding [Methylotenera mobilis JLW8] Length = 165 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM+ AL A+ AAL E+PVGA+ V + II R N L D +AHAEI A+R Sbjct: 10 EQDQAFMNIALTLAKQAALAGEVPVGAIVVKDGVIIGRGSNAPITLHDPSAHAEIQAMRD 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L + LYVTLEPC MCA AI ARI +L YGAS+ K G + Sbjct: 70 AAQHLGNYRLVDCTLYVTLEPCAMCAGAIQHARIAKLVYGASDQKTGACGSVVNLMAEQK 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ FF ERR Sbjct: 130 LNHHTTVASGLLADECGMMLSSFFSERR 157 >gi|237745836|ref|ZP_04576316.1| tRNA-specific adenosine deaminase [Oxalobacter formigenes HOxBLS] gi|229377187|gb|EEO27278.1| tRNA-specific adenosine deaminase [Oxalobacter formigenes HOxBLS] Length = 150 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 83/147 (56%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +VFM AL++A A E+PVGAV VL ++I+ N D TAHAEI+A+R Sbjct: 2 TDDVFMRAALDQAALAKEAGEVPVGAVVVLEGRVIASGFNCPISRHDPTAHAEIMALRNA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +I LP +LYVTLEPC+MCA A+ AR++R+ +GA +PK G + + Sbjct: 62 AKICGNYRLPACELYVTLEPCSMCAGAMIHARLKRVVFGAFDPKTGACGSVVDLFGQKEL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + +++ FF ERR Sbjct: 122 NHHTTVTSGVLQDECSLLLKMFFAERR 148 >gi|148262140|ref|YP_001228846.1| CMP/dCMP deaminase, zinc-binding [Geobacter uraniireducens Rf4] gi|146395640|gb|ABQ24273.1| tRNA-adenosine deaminase [Geobacter uraniireducens Rf4] Length = 176 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 77/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +M A+ EA+ AA R E+P+GAV V + KIISR N +D AHAE++AIR Sbjct: 20 KDDVWWMGSAIREAEKAAERGEVPIGAVIVRDGKIISRGYNLREGKQDPAAHAELIAIRK 79 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L LYVTLEPC MC AI LAR+ ++ +G +PKGG + Sbjct: 80 AAKKLGNWRLAGTTLYVTLEPCIMCMGAILLARVEKVVFGCYDPKGGAAGSLYDLSDDKR 139 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI + ++ FF R Sbjct: 140 LNHRVTLVAGIRQAECAALLSGFFAALR 167 >gi|262395051|ref|YP_003286905.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. Ex25] gi|262338645|gb|ACY52440.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. Ex25] Length = 182 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +FM A+ A+ A E+PVGAV V + +II+ NR+ D TAHAEI +R Sbjct: 9 QDELFMRRAMVLAEQAEAEGEVPVGAVLVKDGEIIAEGWNRSIGTNDATAHAEIQTLRKA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 69 GQKIENYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAA 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E R +Q FFK RR Sbjct: 129 YHYALVEKGLLEDECRTQLQAFFKRRR 155 >gi|17989385|ref|NP_542018.1| cytosine deaminase [Brucella melitensis bv. 1 str. 16M] gi|148558663|ref|YP_001257252.1| cytidine and deoxycytidylate deaminase family protein [Brucella ovis ATCC 25840] gi|297249905|ref|ZP_06933606.1| cytosine deaminase [Brucella abortus bv. 5 str. B3196] gi|17985258|gb|AAL54282.1| cytosine deaminase [Brucella melitensis bv. 1 str. 16M] gi|148369948|gb|ABQ62820.1| cytidine and deoxycytidylate deaminase family protein [Brucella ovis ATCC 25840] gi|297173774|gb|EFH33138.1| cytosine deaminase [Brucella abortus bv. 5 str. B3196] Length = 204 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 93/142 (65%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A R E+P+GAV V + +II+RAGNR RE DVTAHAEIL IR +L Sbjct: 63 MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 122 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT TCHH+PE Sbjct: 123 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 182 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IYPG E +R+I++DFF+E+R Sbjct: 183 IYPGFCEADARKILKDFFREKR 204 >gi|331265454|ref|YP_004325084.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus oralis Uo5] gi|326682126|emb|CBY99742.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus oralis Uo5] Length = 155 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL+EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 6 EEKESFMREALKEAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIEN 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L+VT+EPC MC+ AI LARI ++ YGA N K G + T Sbjct: 66 ANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPKVVYGAKNQKFGAAGSLYDILTDER 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E I+QDFF+ RR Sbjct: 126 LNHRVEVETGVLESECAAIMQDFFRNRR 153 >gi|196228535|ref|ZP_03127402.1| CMP/dCMP deaminase zinc-binding [Chthoniobacter flavus Ellin428] gi|196227938|gb|EDY22441.1| CMP/dCMP deaminase zinc-binding [Chthoniobacter flavus Ellin428] Length = 156 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 61/147 (41%), Positives = 84/147 (57%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL +A+ A + E+P+GAV V +II+RA N+ LKD TAHAE+LAI Sbjct: 9 SDTYFMGEALRQARRAWEQEEVPIGAVIVHQGRIIARACNQVEVLKDATAHAEMLAITQA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L E DLYVT EPC MCA A+ R++R+ +G +PK G + Q Sbjct: 69 ESVLGDWRLNECDLYVTKEPCPMCAGALVHVRMKRVVFGCPSPKDGAGGSLLQILQHPKL 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +HS EI G+ + ++Q FF+ERR Sbjct: 129 NHSCEITTGVRQDECAAMLQAFFRERR 155 >gi|253580414|ref|ZP_04857679.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848144|gb|EES76109.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 181 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 48/149 (32%), Positives = 75/149 (50%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM A+ +A+ A E+P+G V V KII+R NR K+ +HAE+ AIR Sbjct: 10 LTDQERFMKEAIRQAKKAEALEEVPIGCVIVHEGKIIARGYNRRNTDKNTLSHAELNAIR 69 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L +YVTLEPC MC+ A+ +RI + G N K G + + Sbjct: 70 KASKKLGDWRLEGCTMYVTLEPCQMCSGALVQSRIDEVVIGCMNAKAGCAGSVMNLLQVD 129 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I G+ E+ ++ +FF++ R Sbjct: 130 GFNHQVKIIQGVLEEECSSMLSEFFRKLR 158 >gi|238918820|ref|YP_002932334.1| cytidine and deoxycytidylate deaminase family protein [Edwardsiella ictaluri 93-146] gi|238868388|gb|ACR68099.1| cytidine and deoxycytidylate deaminase family protein [Edwardsiella ictaluri 93-146] Length = 170 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 83/148 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + +M AL+ A+ A + E+PVGAV VLN+++I NR D TAHAEI+A++ Sbjct: 4 RDDSDWMRHALQLAEKARAQGEVPVGAVLVLNDRVIGEGWNRPITRHDPTAHAEIMALQQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G ++ L E LYVTLEPC MCA A+ +RIRRL YGA + K G + Sbjct: 64 GGAVMQNYRLLEATLYVTLEPCVMCAGAMVHSRIRRLVYGAPDLKTGAAGSLLDVLGHPG 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + DFF++RR Sbjct: 124 MNHRIEVCGGVLADACAAQLSDFFRQRR 151 >gi|94310515|ref|YP_583725.1| tRNA-adenosine deaminase [Cupriavidus metallidurans CH34] gi|93354367|gb|ABF08456.1| tRNA-specific adenosine deaminase [Cupriavidus metallidurans CH34] Length = 189 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 55/144 (38%), Positives = 87/144 (60%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M+ AL+EA+ A E+PVGAV V ++KII+R N D +AHAE+ A+R Sbjct: 12 ERDRFYMAAALDEARLAEAAGEVPVGAVVVWDDKIIARGHNLPIRSVDPSAHAEMQALRA 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 ++L +PE ++YVTLEPC MC+ AI AR+R + +GA++PK G + + AT Sbjct: 72 AAKVLGNYRMPECEIYVTLEPCPMCSGAILHARLRHVVFGATDPKTGAAGSVVDLFAQAT 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 +H + G+ Q+++DFF Sbjct: 132 LNHQTTLTRGVMADECGQLLRDFF 155 >gi|319655047|ref|ZP_08009117.1| cytidine/deoxycytidylate deaminase [Bacillus sp. 2_A_57_CT2] gi|317393271|gb|EFV74039.1| cytidine/deoxycytidylate deaminase [Bacillus sp. 2_A_57_CT2] Length = 178 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 83/147 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + ++M A++EA+ A E+P+GAV VL +II+RA N + AHAE+LAI Sbjct: 7 TEDELYMQEAIKEAKLAEGLEEVPIGAVIVLEGEIIARAHNLREVNQTAIAHAELLAIDQ 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C+ L L LYVTLEPC MC+ +I L+RI+++ YGA +PKGG Sbjct: 67 ACKNLGTWRLENAVLYVTLEPCPMCSGSIILSRIKKVVYGAKDPKGGCAGTLMNLLQDER 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148 +H E+ PG+ E+ +++ FF+ Sbjct: 127 FNHQSEVVPGVLEEECGEMLSSFFRGL 153 >gi|289825514|ref|ZP_06544721.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 172 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G Sbjct: 7 DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 67 GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAARSLIDVLHHPGM 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ ++ DFF+ RR Sbjct: 127 NHRVEIIEGVLRDECATLLSDFFRMRR 153 >gi|298571687|gb|ADI87839.1| hypothetical protein AKSOIL_0331 [uncultured bacterium Ak20-3] Length = 156 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM LE A A E+P+GAV V + KIIS + N+ + D T HAEILAI Sbjct: 6 KNHEYFMKRCLELAHEAEKNLEVPIGAVIVHDGKIISESSNKREKNHDATGHAEILAIHD 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C+ L L DLYVTLEPC MCA A+ ARIR +Y+GA +PKGG + + + + Sbjct: 66 ACQKLQSWRLSACDLYVTLEPCLMCAGALVQARIRNVYFGAYDPKGGALGSLYKIHEDTR 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ ++ FFK++R Sbjct: 126 LNHRFPAVGGVLGDECGSLLSTFFKKKR 153 >gi|170023497|ref|YP_001720002.1| tRNA-specific adenosine deaminase [Yersinia pseudotuberculosis YPIII] gi|169750031|gb|ACA67549.1| CMP/dCMP deaminase zinc-binding [Yersinia pseudotuberculosis YPIII] Length = 187 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A A E+PVGAV VL NK+I NR D TAHAEI+A+R G Sbjct: 24 SDEYWMRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQG 83 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + Sbjct: 84 GQAVQNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGM 143 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI + FF++RR Sbjct: 144 NHQIEVSAGILATACSHQLSAFFRQRR 170 >gi|259907686|ref|YP_002648042.1| tRNA-specific adenosine deaminase [Erwinia pyrifoliae Ep1/96] gi|224963308|emb|CAX54793.1| tRNA-specific adenosine deaminase [Erwinia pyrifoliae Ep1/96] gi|310764806|gb|ADP09756.1| tRNA-specific adenosine deaminase [Erwinia sp. Ejp617] Length = 166 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 55/151 (36%), Positives = 79/151 (52%), Gaps = 2/151 (1%) Query: 1 MKKG--NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M AL A+ A E+PVGAV VL+ + I NR D TAHAE++A Sbjct: 1 MTDHNEEYWMRHALRLARRAWDEGEVPVGAVLVLDGQAIGEGWNRPIGQHDPTAHAEMMA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +R G +++ L + LYVTLEPC MCA A+ R+ RL YGA + K G + Sbjct: 61 LRQGGKVIENYRLLDTTLYVTLEPCVMCAGAMIHGRVGRLVYGARDAKTGAAGSLLDVLG 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A +H ++ G+ ++ DFF++RR Sbjct: 121 HAGMNHHVQVDCGVLRDECAAMLSDFFRQRR 151 >gi|37679027|ref|NP_933636.1| cytosine/adenosine deaminase [Vibrio vulnificus YJ016] gi|37197769|dbj|BAC93607.1| cytosine/adenosine deaminase [Vibrio vulnificus YJ016] Length = 181 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + VFM A+E A A E+PVGAV V + ++I+ N++ D TAHAEI +R Sbjct: 11 QDEVFMRRAIELAAIAESEGEVPVGAVLVKDGEVIAEGWNQSIGQHDATAHAEIQTLRQA 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + LYVTLEPC MCA A+ +R++R+ +GA + K G ++ Sbjct: 71 GQSLGNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLDLFSSQAA 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ E R+ +Q FFK RR Sbjct: 131 YHYATIDKGLLESECREQLQAFFKRRR 157 >gi|85712706|ref|ZP_01043751.1| Cytosine/adenosine deaminase putative [Idiomarina baltica OS145] gi|85693438|gb|EAQ31391.1| Cytosine/adenosine deaminase putative [Idiomarina baltica OS145] Length = 179 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M ++M ALE A AA +E+PVGAV VLN+ I+ N+ L D +AHAE AIR Sbjct: 15 MTTDEIYMQRALELAHKAADEDEVPVGAVLVLNDMIVGEGYNQVITLSDPSAHAEAQAIR 74 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L + LYVTLEPC MCA I+ AR++RL +GA +P+ G + Sbjct: 75 AAGKNVDNYRLTDSTLYVTLEPCAMCAGLITHARVKRLVFGAPDPRTGATGTAIEVLNHV 134 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +H E+ G+ + I++ FF+ RR Sbjct: 135 SMNHRVEVTSGVLAEPCGDILRQFFRARR 163 >gi|295094398|emb|CBK83489.1| Cytosine/adenosine deaminases [Coprococcus sp. ART55/1] Length = 169 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 50/146 (34%), Positives = 77/146 (52%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A+ +A+ A ++P+G V V +++II+R N+ K AHAEILAI Sbjct: 17 HEKYMDKAIAQAKRAYANGDVPIGCVIVHDDRIIARGFNKRNLKKTTLAHAEILAIEQAS 76 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L L E +YVTLEPC MCA AI ARI + G NPK G + + + Sbjct: 77 KKLGDWRLEECTMYVTLEPCQMCAGAIVQARIPNVVIGCMNPKAGCAGSIINLLDMKQFN 136 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ + ++++ FF++ R Sbjct: 137 HQVEVIRGVRQDECSEMMKSFFRDLR 162 >gi|328472552|gb|EGF43415.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus 10329] Length = 199 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +FM AL A+ A L E+PVGAV V + ++I+ NR+ D TAHAEI +R Sbjct: 34 QDEIFMRRALALAEQAELEGEVPVGAVLVKDGEVIAEGWNRSICSHDATAHAEIQTLRNA 93 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 94 GAVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAA 153 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E R+ +Q FFK RR Sbjct: 154 YHYATVERGLLEDECREQLQAFFKRRR 180 >gi|320539250|ref|ZP_08038920.1| putative cytidine and deoxycytidylate deaminase zinc-binding protein [Serratia symbiotica str. Tucson] gi|320030642|gb|EFW12651.1| putative cytidine and deoxycytidylate deaminase zinc-binding protein [Serratia symbiotica str. Tucson] Length = 170 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 59/151 (39%), Positives = 78/151 (51%), Gaps = 2/151 (1%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K +M AL A A E+PVGA+ VL+N++I NR D TAHAEI+A Sbjct: 2 MTKYSDQYWMCQALRLALRAQEEGEVPVGALLVLDNQVIGEGWNRPIGRHDPTAHAEIMA 61 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +R G +L L LYVTLEPC MCA A+ +RIRRL YG ++ K G + Sbjct: 62 LRQGGAVLQNYRLLNATLYVTLEPCVMCAGAMVHSRIRRLVYGTADEKTGAAGSLMDILR 121 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ ++ FF+ RR Sbjct: 122 HPGMNHQVEIASGVLADECAAMLSHFFRLRR 152 >gi|225387328|ref|ZP_03757092.1| hypothetical protein CLOSTASPAR_01081 [Clostridium asparagiforme DSM 15981] gi|225046577|gb|EEG56823.1| hypothetical protein CLOSTASPAR_01081 [Clostridium asparagiforme DSM 15981] Length = 162 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 79/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+ +A+ A+ E+P+G V V +KII+R NR ++V +HAEI+AIR Sbjct: 1 MTTDERYMKEAVRQAKKASALGEVPIGCVIVYEDKIIARGYNRRMVDQNVLSHAEIIAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ + L LYVTLEPC MCA AI AR+ ++ G NPK G + Sbjct: 61 KACKKMGDWRLENCTLYVTLEPCPMCAGAIVQARVPQVVIGCMNPKAGCAGSVLDMLHED 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E GI + ++++FF+ R Sbjct: 121 GFNHQVETKIGILGEECSAMMKEFFRALR 149 >gi|205371946|ref|ZP_03224765.1| hypothetical protein Bcoam_00240 [Bacillus coahuilensis m4-4] Length = 160 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 52/145 (35%), Positives = 78/145 (53%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+EEA A E+P+GAV V + ++I+ N ++ HAE++AI+ C Sbjct: 4 EHFMKLAIEEALKAKEILEVPIGAVIVKDGEVIATGHNLRETTQNAITHAEVIAIQKACE 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L +LYVTLEPC MC+ AI +RI ++ YGA +PK G + + +H Sbjct: 64 KLGTWRLEGAELYVTLEPCPMCSGAIVQSRIEKVIYGAKDPKAGCAGSLMNLLQDSRFNH 123 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ GI E +++ FF+E R Sbjct: 124 QCEVEHGILEVECGELLSSFFRELR 148 >gi|51597197|ref|YP_071388.1| tRNA-specific adenosine deaminase [Yersinia pseudotuberculosis IP 32953] gi|186896294|ref|YP_001873406.1| tRNA-specific adenosine deaminase [Yersinia pseudotuberculosis PB1/+] gi|51590479|emb|CAH22119.1| putative zinc-binding protein [Yersinia pseudotuberculosis IP 32953] gi|186699320|gb|ACC89949.1| CMP/dCMP deaminase zinc-binding [Yersinia pseudotuberculosis PB1/+] Length = 187 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A A E+PVGAV VL NK+I NR D TAHAEI+A+R G Sbjct: 24 SDEYWMRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQG 83 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + Sbjct: 84 GQAVQNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGM 143 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI + FF++RR Sbjct: 144 NHQIEVSAGILATACSHQLSAFFRQRR 170 >gi|288554625|ref|YP_003426560.1| CMP/dCMP deaminase zinc-binding protein [Bacillus pseudofirmus OF4] gi|288545785|gb|ADC49668.1| CMP/dCMP deaminase zinc-binding protein [Bacillus pseudofirmus OF4] Length = 162 Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 75/148 (50%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M AL EA A E+P+GAV V + ++I+ A NR AHAE+LAI+ Sbjct: 3 ETHEDWMKLALREADAAEQIGEVPIGAVIVKDGEVIAAAHNRRECDHQAIAHAELLAIKE 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C +L L LYVTLEPC MCA AI +RI + YGA++PK G Sbjct: 63 ACDVLGSWRLSGCTLYVTLEPCPMCAGAIVQSRIDLVVYGAADPKAGCAGTLMNLLDDPR 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G E + + FF++ R Sbjct: 123 FNHRAEVISGCLETECGERLTAFFRKLR 150 >gi|188584656|ref|YP_001916201.1| tRNA-adenosine deaminase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349343|gb|ACB83613.1| tRNA-adenosine deaminase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 158 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 85/148 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A+++A+ A + E+P+GAV V + ++I+ N+ +D T+HAEI+AI+ Sbjct: 6 NTDKYWMQQAIDQAKLAYNKGEVPIGAVIVKDEQLIATGFNKRETSQDATSHAEIIAIQS 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C L L + LYVT+EPC MCA AI +RI +L +G +PK G + +Q Sbjct: 66 ACNYLGGWRLLDCTLYVTIEPCPMCAGAILQSRITKLVFGTEDPKAWGELSISQLLQNPQ 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I GI ++ S+ II+ FF E R Sbjct: 126 LNHQVDIVEGICKEESKDIIKQFFHELR 153 >gi|153001509|ref|YP_001367190.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS185] gi|151366127|gb|ABS09127.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS185] Length = 174 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 73/149 (48%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK +M A+ A+ A E+PVGAV V + I+ N + D +AHAEIL +R Sbjct: 9 MKLDEHWMQVAMLMAEKAEAEGEVPVGAVLVKDGLQIATGYNLSISQHDPSAHAEILCLR 68 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G Sbjct: 69 EAGRLVENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHP 128 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + FFK RR Sbjct: 129 AFNHQVEVTSGVLADACSAQLSRFFKRRR 157 >gi|238762806|ref|ZP_04623775.1| tRNA-specific adenosine deaminase [Yersinia kristensenii ATCC 33638] gi|238699111|gb|EEP91859.1| tRNA-specific adenosine deaminase [Yersinia kristensenii ATCC 33638] Length = 194 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A A E+PVGA+ VL+N++I NR+ D TAHAEI+A+R G Sbjct: 29 SDEYWMQRALVLALRAQAEGEVPVGAILVLDNQVIGEGWNRSIGDNDPTAHAEIMALRQG 88 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + Sbjct: 89 GQAVQNYRLIDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLVDILRHPGM 148 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + FF+ RR Sbjct: 149 NHQIEITAGVLADACSHQLSAFFRLRR 175 >gi|148981936|ref|ZP_01816576.1| cytosine/adenosine deaminase [Vibrionales bacterium SWAT-3] gi|145960698|gb|EDK26041.1| cytosine/adenosine deaminase [Vibrionales bacterium SWAT-3] Length = 181 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 54/147 (36%), Positives = 82/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +FM A+E A+ A E+PVGAV V + ++IS NR+ D TAHAE+ +R Sbjct: 9 QDEIFMRRAIEVAKKAESEGEVPVGAVLVKDGEVISEGWNRSIGSHDATAHAEVETLRKA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++L L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 69 GQVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFESQAS 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E R+ +Q FFK RR Sbjct: 129 YHYADVEHGLLEDECREQLQAFFKRRR 155 >gi|332365217|gb|EGJ42980.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1059] Length = 179 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 29 IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 89 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 148 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+Q+FF++RR Sbjct: 149 RLNHRVEVEIGVLQEECAQIMQEFFRQRR 177 >gi|117919687|ref|YP_868879.1| tRNA-adenosine deaminase [Shewanella sp. ANA-3] gi|117612019|gb|ABK47473.1| tRNA-adenosine deaminase [Shewanella sp. ANA-3] Length = 222 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 49/146 (33%), Positives = 69/146 (47%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A+ A+ A E+PVGAV V + I+ N + D AHAEI +R Sbjct: 59 DEHWMRVAMSMAEKAEAAGEVPVGAVLVKGGQQIAAGYNLSISEHDPCAHAEIQCLRAAG 118 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + + L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 119 QTIENYRLLDTTLYVTLEPCAMCAGAMVHSRIARVVFGAKDEKTGAAGTVLNLLQHPAFN 178 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ Q + FFK RR Sbjct: 179 HQVEVTSGVLAQDCADQLSRFFKRRR 204 >gi|90407089|ref|ZP_01215278.1| hypothetical protein PCNPT3_02575 [Psychromonas sp. CNPT3] gi|90311811|gb|EAS39907.1| hypothetical protein PCNPT3_02575 [Psychromonas sp. CNPT3] Length = 182 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 75/147 (51%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A A E+PVGAV V +N++I+ N + D AHAE++A+R Sbjct: 21 NDEKWMQYALLLADKAEALGEVPVGAVLVKDNEVIAEGWNLSILSHDACAHAEVMAVREA 80 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L + LYVTLEPC MCA A+ ARI+RL YGA + K G + + Sbjct: 81 GHKLQNYRLIDCTLYVTLEPCPMCAGALVHARIKRLVYGAPDLKTGAAGSVFNLLSHVKL 140 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I GI + I FFK RR Sbjct: 141 NHQVDITSGILSDQCSTKISQFFKRRR 167 >gi|330830279|ref|YP_004393231.1| CMP/dCMP deaminase zinc-binding protein [Aeromonas veronii B565] gi|328805415|gb|AEB50614.1| CMP/dCMP deaminase zinc-binding protein [Aeromonas veronii B565] Length = 201 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A+ A A EIPVGAV VL+ +++ NR+ D AHAE++AIR Sbjct: 36 EQDEQWMRHAMALAARAEGIGEIPVGAVLVLDGQVVGEGWNRSISEHDACAHAEVMAIRA 95 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L+ L + LYVTLEPC MCA A+ +R++R+ YGA + K G + + Sbjct: 96 AGKQLANYRLLDTTLYVTLEPCCMCAGALIHSRVKRVVYGARDLKTGAAGSVFEILQDPR 155 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +HS E+ G+ + FFK RR Sbjct: 156 HNHSVELIGGVLADACSAQLSAFFKRRR 183 >gi|254509189|ref|ZP_05121287.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus 16] gi|219547894|gb|EED24921.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus 16] Length = 187 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 81/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M A+E A +A E+PVGAV V + +II+ N++ D TAHAE+ IR Sbjct: 16 QDEQYMRRAMELAAHAETEGEVPVGAVLVKDGEIIAEGWNQSIGCHDATAHAEMQTIRKA 75 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++L L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 76 GQVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFEHQAA 135 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E+ R +Q FFK RR Sbjct: 136 YHYADVEQGLLEEECRVQLQSFFKRRR 162 >gi|238793763|ref|ZP_04637384.1| tRNA-specific adenosine deaminase [Yersinia intermedia ATCC 29909] gi|238726827|gb|EEQ18360.1| tRNA-specific adenosine deaminase [Yersinia intermedia ATCC 29909] Length = 181 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A A E+PVGAV VL N++I N++ D TAHAEI+A+R G Sbjct: 18 SDEYWMQRALTLALRAQNEGEVPVGAVLVLGNQVIGEGWNKSIRDNDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +++ L E LYVTLEPC MCA A+ +RIRRL YGA++ K G + Sbjct: 78 GQVVQNYRLLEATLYVTLEPCVMCAGAMIHSRIRRLVYGANDLKTGAAGSLVDILHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + + FF+ RR Sbjct: 138 NHQIEVSAGVLAETCSHQLSAFFRLRR 164 >gi|160882011|ref|YP_001560979.1| CMP/dCMP deaminase zinc-binding [Clostridium phytofermentans ISDg] gi|160430677|gb|ABX44240.1| CMP/dCMP deaminase zinc-binding [Clostridium phytofermentans ISDg] Length = 161 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+ +A+ AAL E+P+G V V +NKII+R N+ K AHAEILAI Sbjct: 1 MDEKIKYMKAAIVQAKKAALIGEVPIGCVIVYDNKIIARGYNKRNTKKTTLAHAEILAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R L+ L +YVTLEPC MC+ AI +R+ R+ G+ NPK G + + Sbjct: 61 KASRYLNDWRLEGCTMYVTLEPCQMCSGAIVQSRMDRVVIGSMNPKAGCAGSILNLLQME 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ +++QDFF R Sbjct: 121 QFNHQVELETGVMQEECTKLLQDFFVMLR 149 >gi|303258084|ref|ZP_07344092.1| cytidine/deoxycytidylate deaminase family protein [Burkholderiales bacterium 1_1_47] gi|330998703|ref|ZP_08322432.1| cytidine and deoxycytidylate deaminase zinc-binding region [Parasutterella excrementihominis YIT 11859] gi|302859103|gb|EFL82186.1| cytidine/deoxycytidylate deaminase family protein [Burkholderiales bacterium 1_1_47] gi|329576442|gb|EGG57954.1| cytidine and deoxycytidylate deaminase zinc-binding region [Parasutterella excrementihominis YIT 11859] Length = 281 Score = 219 bits (560), Expect = 7e-56, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 79/149 (53%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM AL EA+ A E+PVGAV V KII R N D + HAEI+A++ Sbjct: 125 SRDEYFMREALVEAEKAHQAGEVPVGAVVVDKEGKIIGRGHNLVVAGHDPSGHAEIIALK 184 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L +YVTLEPC MC+ AI AR+ RL YGA + K G E+ + + Sbjct: 185 NASQNLKNYRLDNCTIYVTLEPCPMCSGAIIGARLARLVYGAKDQKAGAAESVFKLFDEK 244 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E+ +I+Q FF E R Sbjct: 245 RVNHHTDVTAGVLEEDCLRILQSFFVELR 273 >gi|332883068|gb|EGK03352.1| hypothetical protein HMPREF9456_01989 [Dysgonomonas mossii DSM 22836] Length = 148 Score = 219 bits (560), Expect = 7e-56, Method: Composition-based stats. Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL EA+ A + E+P+GAV V +II+R N L DVTAHAE+ AI Sbjct: 7 NDDYYMRQALNEARQAFDKGEVPIGAVVVCKGRIIARGHNLTETLTDVTAHAEMQAITAA 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L + L + LYVT+EPC MCA + ++I ++ YGA + K G ++ + Sbjct: 67 ANVLGGKYLTDCILYVTIEPCPMCAGGLLWSQISKIVYGAKDEKKG-----YSVFSPSIL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ E ++++FFK++R Sbjct: 122 HPKTEVVSGVMEDECASLMKEFFKQKR 148 >gi|225628666|ref|ZP_03786700.1| cytidine and deoxycytidylate deaminase family protein [Brucella ceti str. Cudo] gi|237816711|ref|ZP_04595703.1| cytidine and deoxycytidylate deaminase family protein [Brucella abortus str. 2308 A] gi|225616512|gb|EEH13560.1| cytidine and deoxycytidylate deaminase family protein [Brucella ceti str. Cudo] gi|237787524|gb|EEP61740.1| cytidine and deoxycytidylate deaminase family protein [Brucella abortus str. 2308 A] Length = 171 Score = 219 bits (560), Expect = 7e-56, Method: Composition-based stats. Identities = 93/142 (65%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A R E+P+GAV V + +II+RAGNR RE DVTAHAEIL IR +L Sbjct: 30 MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 89 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT TCHH+PE Sbjct: 90 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 149 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IYPG E +R+I++DFF+E+R Sbjct: 150 IYPGFCEADARKILKDFFREKR 171 >gi|218289065|ref|ZP_03493302.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius LAA1] gi|218240890|gb|EED08068.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius LAA1] Length = 156 Score = 219 bits (560), Expect = 7e-56, Method: Composition-based stats. Identities = 65/151 (43%), Positives = 89/151 (58%), Gaps = 2/151 (1%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM ALE A+ AA E+PVGAV V N +I+ NR +D TAHAE+LA Sbjct: 2 MEQAADERFMRRALELAEEAARWGEVPVGAVVVENGRIVGEGFNRRETWRDGTAHAEMLA 61 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I R L L LYVTLEPC MCA AI L+R++RL YGA++ KGG + + + Sbjct: 62 IEEASRRLGGWRLTNCVLYVTLEPCPMCAGAIVLSRVQRLVYGATDAKGGAVASKVRLLE 121 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+P+I GI +++ DFF++RR Sbjct: 122 PGLWNHAPQITSGILADDCAKLLTDFFRKRR 152 >gi|153948638|ref|YP_001400126.1| tRNA-specific adenosine deaminase [Yersinia pseudotuberculosis IP 31758] gi|152960133|gb|ABS47594.1| tRNA-specific adenosine deaminase [Yersinia pseudotuberculosis IP 31758] Length = 200 Score = 219 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A A E+PVGAV VL NK+I NR D TAHAEI+A+R G Sbjct: 37 SDEYWMRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQG 96 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + Sbjct: 97 GQAVQNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGM 156 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI + FF++RR Sbjct: 157 NHQIEVSAGILATACSHQLSAFFRQRR 183 >gi|153813521|ref|ZP_01966189.1| hypothetical protein RUMOBE_03942 [Ruminococcus obeum ATCC 29174] gi|149830392|gb|EDM85484.1| hypothetical protein RUMOBE_03942 [Ruminococcus obeum ATCC 29174] Length = 164 Score = 219 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 51/142 (35%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ +A+ A E+P+G V V + KII+R NR K+ +HAE+ AIR + L Sbjct: 1 MKEAIRQAKKARALEEVPIGCVIVSDGKIIARGYNRRNTDKNTLSHAELNAIRKASKKLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L +YVTLEPC MCA A+ +RI + G+ NPK G + + +H + Sbjct: 61 DWRLEGCTMYVTLEPCQMCAGALVQSRIDEVVIGSMNPKAGCAGSVLNLLQVDNFNHQVK 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I G+ E+ ++ DFF+E R Sbjct: 121 ITRGVLEEECSMMLSDFFRELR 142 >gi|254490420|ref|ZP_05103607.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Methylophaga thiooxidans DMS010] gi|224464386|gb|EEF80648.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Methylophaga thiooxydans DMS010] Length = 149 Score = 219 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 86/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL AQ A E+PVGAV VLNN+II N+ D TAHAEI+A+R Sbjct: 1 MSDEIRWMQRALALAQRAEAEGEVPVGAVIVLNNEIIGEGWNQPISANDATAHAEIIALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C++++ LP D+Y+TLEPC MCA A+ ARI ++ Y + PK G + +TL Sbjct: 61 QACQLMNNYRLPGADMYITLEPCAMCAGALVHARINKVVYATAEPKTGAAGSCVDIFTLP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ ++S Q+++ FF+ +R Sbjct: 121 NLNHRVSTESGLLAEQSSQLLRQFFRGKR 149 >gi|153837700|ref|ZP_01990367.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AQ3810] gi|260366298|ref|ZP_05778754.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus K5030] gi|260876398|ref|ZP_05888753.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AN-5034] gi|308095607|ref|ZP_05907165.2| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus Peru-466] gi|308126068|ref|ZP_05907632.2| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AQ4037] gi|149748895|gb|EDM59726.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AQ3810] gi|308086905|gb|EFO36600.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus Peru-466] gi|308092990|gb|EFO42685.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AN-5034] gi|308106632|gb|EFO44172.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AQ4037] gi|308112714|gb|EFO50254.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus K5030] Length = 174 Score = 219 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +FM AL A+ A L E+PVGAV V + ++I+ NR+ D TAHAEI +R Sbjct: 9 QDEIFMRRALALAEQAELEGEVPVGAVLVKDGEVIAEGWNRSICSHDATAHAEIQTLRNA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 69 GAVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAA 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E R+ +Q FFK RR Sbjct: 129 YHYATVEKGLLEDECREQLQAFFKRRR 155 >gi|327472530|gb|EGF17961.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK408] Length = 156 Score = 219 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGASN K G + T Sbjct: 66 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGASNQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+Q+FF++RR Sbjct: 126 RLNHRVEVETGVLQEECAQIMQEFFRQRR 154 >gi|308171910|ref|YP_003918615.1| tRNA specific adenosine deaminase [Bacillus amyloliquefaciens DSM 7] gi|307604774|emb|CBI41145.1| tRNA specific adenosine deaminase [Bacillus amyloliquefaciens DSM 7] gi|328551718|gb|AEB22210.1| tRNA specific adenosine deaminase [Bacillus amyloliquefaciens TA208] gi|328909978|gb|AEB61574.1| tRNA specific adenosine deaminase [Bacillus amyloliquefaciens LL3] Length = 160 Score = 219 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 82/143 (57%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A++EA+ A + E+P+GAV VL+++I++RA N + AHAE+LAI Sbjct: 2 NDEYYMREAIKEAKKAEAKGEVPIGAVLVLHDEIVARAHNLRETEQRSLAHAEMLAIDEA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 CR L L + LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG Sbjct: 62 CRKLGTWRLEDAVLYVTLEPCPMCAGAVVLSRVDKVVFGAFDPKGGCTGTLMNLLQEERF 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 +H E+ G+ E+ +++ FF Sbjct: 122 NHQAEVVSGVLEEECGEMLSAFF 144 >gi|253988801|ref|YP_003040157.1| tRNA -specific adenosine deaminase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780251|emb|CAQ83412.1| similar to ecoli yfhc protein, tRNA-specific adenosine deaminase [Photorhabdus asymbiotica] Length = 169 Score = 219 bits (560), Expect = 9e-56, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 81/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A+E A A + EIPVGAV V +N+II+ N++ D +AHAE++A+R G Sbjct: 6 SDEYWMQQAMERAIKAWEQGEIPVGAVLVADNEIIAEGWNQSIIAHDPSAHAEVIALRKG 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L LYVTLEPC MCA A+ +RI+RL YGAS+ K G + Sbjct: 66 GEQLQNYRLLNTTLYVTLEPCAMCAGAMIHSRIQRLVYGASDMKTGAAGSLIDILRHPGM 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + ++ FFK+RR Sbjct: 126 NHQIEITGGVLAEACSTMLSVFFKQRR 152 >gi|89892755|ref|YP_516242.1| hypothetical protein DSY0009 [Desulfitobacterium hafniense Y51] gi|219666080|ref|YP_002456515.1| CMP/dCMP deaminase zinc-binding [Desulfitobacterium hafniense DCB-2] gi|89332203|dbj|BAE81798.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219536340|gb|ACL18079.1| CMP/dCMP deaminase zinc-binding [Desulfitobacterium hafniense DCB-2] Length = 148 Score = 219 bits (560), Expect = 9e-56, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 89/147 (60%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M ALEEA+ A + E+P+GAV V +II+RA N +D TAHAE+LA++ Sbjct: 2 NHQDYMRLALEEAEIAFAQGEVPIGAVVVHKGEIIARAHNEKELRQDPTAHAEVLAVQRA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L E LYVTLEPC MCA ++ AR++ L +GA++ KGG + + T + Sbjct: 62 TQALGIWRLSEATLYVTLEPCPMCAGSLVQARLKTLVFGAADLKGGAVGSVTNVLDVNRW 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E+ QI++DFF++ R Sbjct: 122 NHRVEVVAGILEEECAQILKDFFRKLR 148 >gi|332305596|ref|YP_004433447.1| CMP/dCMP deaminase zinc-binding protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172925|gb|AEE22179.1| CMP/dCMP deaminase zinc-binding protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 162 Score = 219 bits (560), Expect = 9e-56, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ ++M AL A AA EIPVGAV V + ++I N++ L D +AHAE+ AIR Sbjct: 3 LEQDQLWMRHALALATKAADAGEIPVGAVLVKDQQVIGEGWNQSIMLNDPSAHAEMQAIR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L LYVTLEPCTMCA + +RI RL +GA + K G + Sbjct: 63 QAGEFIQNYRLIGTTLYVTLEPCTMCAGLLVHSRIERLVFGAHDAKTGAAGSIMDVLRDT 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ + I FF++RR Sbjct: 123 RLNHQVEVVGGVLGEQCGETISAFFRKRR 151 >gi|323499761|ref|ZP_08104720.1| tRNA-specific adenosine-34 deaminase [Vibrio sinaloensis DSM 21326] gi|323315002|gb|EGA68054.1| tRNA-specific adenosine-34 deaminase [Vibrio sinaloensis DSM 21326] Length = 179 Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 81/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +FM A++ A+ A E+PVGAV V + +II+ N++ D TAHAEI +R Sbjct: 9 QDELFMRRAMDLAKQAEAEGEVPVGAVLVKDGEIIAEGWNQSIGQNDATAHAEIQTLRKA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++L L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 69 GQVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFEHQAA 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E R +Q FFK RR Sbjct: 129 YHYADVERGLLETECRTQLQAFFKRRR 155 >gi|315125849|ref|YP_004067852.1| tRNA-specific adenosine deaminase [Pseudoalteromonas sp. SM9913] gi|315014363|gb|ADT67701.1| tRNA-specific adenosine deaminase [Pseudoalteromonas sp. SM9913] Length = 168 Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 84/147 (57%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A +EIPVGA+ V +N++IS NR+ D +AHAE++A+R Sbjct: 6 DDQYWMEQALVYAKQAEQLDEIPVGAIIVKDNQLISAGYNRSITDNDPSAHAEMIAVREA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++L+ L + LYVTLEPC+MCA + +RI+RL +GA++ K G + Sbjct: 66 GKVLNNYRLIDCTLYVTLEPCSMCAGLLVHSRIKRLVFGAADAKTGSAGSIMNLLQEPRL 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ E + + I FFK RR Sbjct: 126 NHQVEITGGVLETQCAETISSFFKRRR 152 >gi|153830778|ref|ZP_01983445.1| zinc-binding domain protein [Vibrio cholerae 623-39] gi|148873734|gb|EDL71869.1| zinc-binding domain protein [Vibrio cholerae 623-39] Length = 193 Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR Sbjct: 27 QDEQFMRRAIALATQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + LS L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ Sbjct: 87 GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAA 146 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R +Q FF+ RR Sbjct: 147 YHYATVEKGLLEEECRAQLQAFFQRRR 173 >gi|27363814|ref|NP_759342.1| tRNA-specific adenosine-34 deaminase [Vibrio vulnificus CMCP6] gi|27359931|gb|AAO08869.1| tRNA-specific adenosine-34 deaminase [Vibrio vulnificus CMCP6] Length = 181 Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + VFM A+E A A E+PVGAV V + ++I+ N++ D TAHAEI +R Sbjct: 11 QDEVFMRRAIELAAIAESEGEVPVGAVLVKDGEVIAEGWNQSIGQHDATAHAEIQTLRQA 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + LYVTLEPC MCA A+ +R++R+ +GA + K G ++ Sbjct: 71 GQSLGNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLDLFSSQAA 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ E R+ +Q FFK RR Sbjct: 131 YHYATIEKGLLELECREQLQAFFKRRR 157 >gi|307704429|ref|ZP_07641340.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK597] gi|307707916|ref|ZP_07644391.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus mitis NCTC 12261] gi|307615981|gb|EFN95179.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus mitis NCTC 12261] gi|307622002|gb|EFO01028.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK597] Length = 155 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ VFM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 6 EEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIEN 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 66 ANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDER 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 126 LNHRVEVETGILEDECAAIMQDFFRNRR 153 >gi|262040295|ref|ZP_06013546.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042404|gb|EEW43424.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 180 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G Sbjct: 18 NDEYWMRHALTLAKRAWEEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +RI RL +GA + K G + Sbjct: 78 GLVLQNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLMDVLHHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ + ++ DFF+ RR Sbjct: 138 NHRVAISEGVLAESCSAMLSDFFRWRR 164 >gi|15902066|ref|NP_357616.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae R6] gi|116516620|ref|YP_815440.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae D39] gi|148987738|ref|ZP_01819201.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP6-BS73] gi|15457551|gb|AAK98826.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116077196|gb|ABJ54916.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae D39] gi|147926202|gb|EDK77275.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP6-BS73] Length = 155 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 65 DANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 125 RLNHRVEVETGILEDECAAIMQDFFRNRR 153 >gi|238796745|ref|ZP_04640251.1| tRNA-specific adenosine deaminase [Yersinia mollaretii ATCC 43969] gi|238719476|gb|EEQ11286.1| tRNA-specific adenosine deaminase [Yersinia mollaretii ATCC 43969] Length = 181 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A+ A A E+PVGAV VL+N++I NR+ D TAHAEI+A+R G Sbjct: 18 SDEYWMQRAMTLALRAQEEGEVPVGAVLVLDNQVIGEGWNRSIRDNDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L E LYVTLEPC MCA A+ +RIRRL YGA++ K G + Sbjct: 78 GQAVQNYRLLEATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLVDILRHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + FF+ RR Sbjct: 138 NHQVEISAGVLADACSHQLSAFFRLRR 164 >gi|306828458|ref|ZP_07461653.1| tRNA-specific adenosine deaminase [Streptococcus mitis ATCC 6249] gi|304429257|gb|EFM32342.1| tRNA-specific adenosine deaminase [Streptococcus mitis ATCC 6249] Length = 155 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL EA+ A +EIP+G V V + +IISR N EL+ HAEI+AI Sbjct: 6 EEKESFMREALREAEIALEHDEIPIGCVIVKDGEIISRGHNAREELQRAVMHAEIMAIEN 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L+VT+EPC MC+ AI LARI ++ YGA N K G + T Sbjct: 66 ANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPKVVYGAKNQKFGAAGSLYDILTDER 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 126 LNHRVEVETGILEDECAGIMQDFFRNRR 153 >gi|300362312|ref|ZP_07058488.1| cytidine/deoxycytidylate deaminase [Lactobacillus gasseri JV-V03] gi|300353303|gb|EFJ69175.1| cytidine/deoxycytidylate deaminase [Lactobacillus gasseri JV-V03] Length = 160 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 50/149 (33%), Positives = 86/149 (57%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A +A+ A + E+P+GA+ V + +I NR +D T HAE++AIR Sbjct: 5 SDKEEYMQLAFAQAKKAEDQGEVPIGAIVVDKDGNVIGEGYNRRELDEDATQHAEMIAIR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + L++TLEPC MC+ AI +R+ +YYGA +PK G + + + Sbjct: 65 EACKNLGSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAAGSVIDLFKVE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P+++ G+ + ++ Q+++DFF+E R Sbjct: 125 KFNHHPQVFGGLFKDQAAQMLKDFFREIR 153 >gi|297170608|gb|ADI21634.1| cytosine/adenosine deaminases [uncultured myxobacterium HF0130_06F04] Length = 159 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 79/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A EA+ A E+PVGA+ + ++++ R NR D AHAEILAI Sbjct: 1 MGRDESWMQAAFAEAEKARALGEVPVGALVIYEDRVVGRGFNRRETDHDPLAHAEILAIG 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + L +LYVTLEPC MCA AI +R+ RL +GA++P+ G Sbjct: 61 EAAKTLGRWRLSGCELYVTLEPCPMCAGAIVNSRLDRLVFGATDPRAGAAGTVFDIVRDQ 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + +I+ DFF + R Sbjct: 121 RLNHQVEVVSGVLGEPCSRILSDFFADLR 149 >gi|307710059|ref|ZP_07646503.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK564] gi|307619039|gb|EFN98171.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK564] Length = 155 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 61/148 (41%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ VFM AL EA+ A +EIP+G V V + KII R N EL+ HAEI+AI Sbjct: 6 EEKEVFMREALREAEIALEHDEIPIGCVIVKDGKIIGRGHNAREELQRAVMHAEIMAIEN 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 66 ANLREESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDER 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 126 LNHRVEVETGILEDECAAIMQDFFRNRR 153 >gi|121533374|ref|ZP_01665202.1| CMP/dCMP deaminase, zinc-binding [Thermosinus carboxydivorans Nor1] gi|121307933|gb|EAX48847.1| CMP/dCMP deaminase, zinc-binding [Thermosinus carboxydivorans Nor1] Length = 149 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 87/147 (59%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M ALEEA+ A E+P+GAV V++ ++++A NR D TAHAEI+ I+ Sbjct: 2 DDYDYMGIALEEARKAYAIGEVPIGAVLVMDGAVVAKAHNRRETWHDATAHAEIIVIQQA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C++L + L LYVT+EPC MCA A+ +RI RL YG+++ K G +E+ Sbjct: 62 CKLLGRWRLTGAALYVTIEPCPMCAGALVNSRIDRLVYGSADYKAGAVESLFNIVQHPAL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ +I++DFF++RR Sbjct: 122 NHRLEVTAGVRADECAEIMRDFFRQRR 148 >gi|116874087|ref|YP_850868.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742965|emb|CAK22089.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 156 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 58/144 (40%), Positives = 85/144 (59%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL EA+ A E+P+GAV VL+ +II RA N ++ HAE+LAI+ C+ Sbjct: 5 FFMQQALAEAEKAQEIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ Sbjct: 65 QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDNRFNHT 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E S ++++ FF+E R Sbjct: 125 CEVEAGLMEVESSEMLKKFFQELR 148 >gi|91975752|ref|YP_568411.1| CMP/dCMP deaminase, zinc-binding [Rhodopseudomonas palustris BisB5] gi|91682208|gb|ABE38510.1| tRNA-adenosine deaminase [Rhodopseudomonas palustris BisB5] Length = 148 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 76/143 (53%), Positives = 99/143 (69%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL A A E+P+G V V ++I+ AGNR +D TAHAE+LAIR + L Sbjct: 6 FMDLALAAANIAGRSGEVPIGCVIVRGGEVIATAGNRTLTDRDPTAHAELLAIREAAQKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E LP+ DLYVTLEPCTMCA AIS ARIRRLY+GA +PKGG +E+G +F+ TCHH+P Sbjct: 66 GSERLPDCDLYVTLEPCTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFFGQPTCHHAP 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y G+ E+ + +++ FFK RR Sbjct: 126 EVYSGVGEREAAAMLRAFFKARR 148 >gi|227545162|ref|ZP_03975211.1| tRNA-adenosine deaminase [Lactobacillus reuteri CF48-3A] gi|300909163|ref|ZP_07126624.1| tRNA-specific adenosine deaminase [Lactobacillus reuteri SD2112] gi|227184845|gb|EEI64916.1| tRNA-adenosine deaminase [Lactobacillus reuteri CF48-3A] gi|300893028|gb|EFK86387.1| tRNA-specific adenosine deaminase [Lactobacillus reuteri SD2112] Length = 170 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 55/145 (37%), Positives = 86/145 (59%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + FM A+ EA+ A + +E+P+GA+ V ++I R N + +DVT HAE+LAI Sbjct: 8 LSEQQKFMKMAIAEAKQARILDEVPIGAIVVHEGQVIGRGHNMREKFQDVTYHAEMLAIM 67 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C L L + DLYVTLEPC MC+ AI ARI+ +YYGA++PK G +++ + Sbjct: 68 EACTNLGSWRLEDCDLYVTLEPCIMCSGAIINARIKNVYYGAADPKAGAVDSLYHLLNDS 127 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +H ++ GI Q++++FF Sbjct: 128 RLNHQVNVHSGILGDECSQMLKNFF 152 >gi|332365640|gb|EGJ43399.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK355] Length = 156 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEDFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 66 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+QDFF+ RR Sbjct: 126 RLNHRVEVETGVLQEECAQIMQDFFRNRR 154 >gi|260886684|ref|ZP_05897947.1| tRNA-specific adenosine deaminase [Selenomonas sputigena ATCC 35185] gi|330839487|ref|YP_004414067.1| CMP/dCMP deaminase zinc-binding protein [Selenomonas sputigena ATCC 35185] gi|260863536|gb|EEX78036.1| tRNA-specific adenosine deaminase [Selenomonas sputigena ATCC 35185] gi|329747251|gb|AEC00608.1| CMP/dCMP deaminase zinc-binding protein [Selenomonas sputigena ATCC 35185] Length = 168 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 58/150 (38%), Positives = 85/150 (56%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 M FM AL+EAQ A E+P+GAV V + +++RA N D TAHAEI+A+ Sbjct: 1 MLDDIAFMKEALKEAQEAFQAGEVPIGAVLVDADGTVVARAHNMRETWHDGTAHAEIIAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + R L + L + LYVT+EPC MCA A+ ++R+ R+ YGA++ K G E+ Sbjct: 61 QEAARKLGRWRLSGLTLYVTIEPCPMCAGALVMSRVDRVVYGATDAKAGACESLFNIVRH 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E R I++ FF +RR Sbjct: 121 PALNHQLEMRAGVLEDECRAIMKRFFGQRR 150 >gi|300113226|ref|YP_003759801.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii C-113] gi|299539163|gb|ADJ27480.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii C-113] Length = 188 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +K +M AL A+ A E+PVGAV V ++I+ N +D TAHAEI AIR Sbjct: 41 EKDIPWMYHALALARYAEETGEVPVGAVVVQEDEIVGEGWNCPINSRDPTAHAEIQAIRA 100 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L LYVTLEPC MCA AI ARIRR+ +GA +PKGG + + Sbjct: 101 ASQQLGNYRLVGTTLYVTLEPCAMCAGAIIQARIRRVVFGAFDPKGGAVGSALSILPGER 160 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E G+ + I+ FF+ RR Sbjct: 161 LNHQVECQGGVLAEACGAILSAFFRARR 188 >gi|306840968|ref|ZP_07473709.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp. BO2] gi|306289025|gb|EFM60290.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp. BO2] Length = 157 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 95/142 (66%), Positives = 111/142 (78%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A R E+P+GAV V N +II+RAGNR RE DVTAHAEILAIR +L Sbjct: 16 MDIALEEAHAAGERGEVPIGAVIVRNGEIIARAGNRTREFNDVTAHAEILAIRQAGEVLG 75 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT TCHH+PE Sbjct: 76 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 135 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IYPG E +R+I++DFF+E+R Sbjct: 136 IYPGFCEADARKILKDFFREKR 157 >gi|304436805|ref|ZP_07396772.1| tRNA-specific adenosine deaminase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370198|gb|EFM23856.1| tRNA-specific adenosine deaminase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 153 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 56/150 (37%), Positives = 85/150 (56%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59 M M ALEEA+ A E+P+GAV + + +IS N D TAHAE++AI Sbjct: 1 MPDDLHGMRLALEEARRAYQCGEVPIGAVILDDVGSVISSGYNLRETEHDATAHAELIAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R C+ L + L + LYVT+EPC MCA AI ++RI R+ YG+++ K G E+ Sbjct: 61 RRACKALGRWRLTGMTLYVTIEPCPMCAGAIVMSRISRVVYGSTDSKAGACESLFNITGC 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P++ G+ + ++++FF+ERR Sbjct: 121 PGLNHQPDVCAGVLAEECAALLKNFFRERR 150 >gi|296131565|ref|YP_003638812.1| CMP/dCMP deaminase zinc-binding protein [Thermincola sp. JR] gi|296030143|gb|ADG80911.1| CMP/dCMP deaminase zinc-binding protein [Thermincola potens JR] Length = 155 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 89/149 (59%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +K +M ALEEA+ A E+P+GAV V+ + +++RA N + KD TAHAE++AI+ Sbjct: 6 EKHIQYMQLALEEARAAFKLGEVPIGAVIVIGDDVVARAHNMKEQWKDATAHAELVAIKE 65 Query: 62 GCRILSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + LYVT+EPC MCA A+ +RI ++ YGA++PK G + + Sbjct: 66 AVQKLGHWRYLKDAALYVTIEPCPMCAGAMVQSRIEKVVYGAADPKAGAMGSLMNLAQDP 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ +++++FF+ R Sbjct: 126 RLNHRVEVVAGVLEEECSELMKEFFRRLR 154 >gi|218708682|ref|YP_002416303.1| tRNA-specific adenosine deaminase [Vibrio splendidus LGP32] gi|218321701|emb|CAV17655.1| tRNA-specific adenosine deaminase [Vibrio splendidus LGP32] Length = 212 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 82/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +FM A+E A+ A E+PVGAV V + ++IS NR+ D TAHAEI +R Sbjct: 27 QDEIFMRRAIEVAKQAEKEGEVPVGAVLVKDGEVISEGWNRSIGCHDATAHAEIETLRKA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 87 GQALENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFESQAS 146 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E+ R+ +Q FFK RR Sbjct: 147 YHYADVEHGLLEEECREQLQAFFKRRR 173 >gi|50122182|ref|YP_051349.1| tRNA-specific adenosine deaminase [Pectobacterium atrosepticum SCRI1043] gi|49612708|emb|CAG76158.1| putative cytidine and deoxycytidylate deaminase [Pectobacterium atrosepticum SCRI1043] Length = 174 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 77/149 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M AL AQ A E+PVGAV VL+N+ I NR D TAHAEI+A+R Sbjct: 10 LRDNEYWMRYALTLAQRAQDEGEVPVGAVLVLDNEAIGEGWNRPIGHHDPTAHAEIMALR 69 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 G +L L E LYVTLEPC MCA A+ +RI RL YGAS+ K G + Sbjct: 70 QGGLVLQNYRLLETTLYVTLEPCIMCAGAMIHSRIGRLVYGASDEKTGAAGSLVDILRHP 129 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ + FF+ RR Sbjct: 130 GMNHQIVIESGVLADECSATLSAFFRMRR 158 >gi|86145643|ref|ZP_01063973.1| Cytosine/adenosine deaminase [Vibrio sp. MED222] gi|85836614|gb|EAQ54740.1| Cytosine/adenosine deaminase [Vibrio sp. MED222] Length = 212 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 82/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +FM A+E A+ A E+PVGAV V + ++IS NR+ D TAHAEI +R Sbjct: 27 QDEIFMRRAIEVAKQAEKEGEVPVGAVLVKDGEVISEGWNRSIGCHDATAHAEIETLRKA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 87 GQALENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFESQAS 146 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E+ R+ +Q FFK RR Sbjct: 147 YHYADVEHGLLEEECREQLQAFFKRRR 173 >gi|332360091|gb|EGJ37905.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1056] Length = 156 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEAFMREALKEAEIALAYDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 66 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+QDFF++RR Sbjct: 126 RLNHRVEVETGVLQEECAQIMQDFFRQRR 154 >gi|332358122|gb|EGJ35954.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK49] Length = 156 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 66 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+QDFF+ RR Sbjct: 126 RLNHRVEVETGVLQEECAQIMQDFFRNRR 154 >gi|167629244|ref|YP_001679743.1| cytidine and deoxycytidylate deaminase zinc-binding region protein, putative [Heliobacterium modesticaldum Ice1] gi|167591984|gb|ABZ83732.1| cytidine and deoxycytidylate deaminase zinc-binding region protein, putative [Heliobacterium modesticaldum Ice1] Length = 152 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 53/146 (36%), Positives = 77/146 (52%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + FM ALEE + A + E+P+G V V + ++I R N K+ AHAE+LAI+ Sbjct: 5 DDKFMGLALEEGRQAYAKGEVPIGCVIVKDGEVIGRGHNLRETEKNPVAHAEVLAIQDAA 64 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L LYVT+EPC MCA AI LARI R+ + +PKGG + Sbjct: 65 NRIGGWRLAGATLYVTVEPCPMCAGAIVLARIPRVVFAVMDPKGGAAGTCFNILESPWTN 124 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E +R+++Q FF+ R Sbjct: 125 HRVSVISGVREGEARELMQSFFQRLR 150 >gi|322386624|ref|ZP_08060249.1| tRNA-specific adenosine deaminase [Streptococcus cristatus ATCC 51100] gi|321269297|gb|EFX52232.1| tRNA-specific adenosine deaminase [Streptococcus cristatus ATCC 51100] Length = 166 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 86/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ +FM AL+EA+ A +EIP+G V V N +II R N EL+ HAEI+AI Sbjct: 16 IEEKEMFMREALKEAEIALANDEIPIGCVLVKNGQIIGRGHNAREELQRAVMHAEIMAIE 75 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L + L+VT+EPC MC+ AI LARI ++ YGA N K G + T A Sbjct: 76 EANQHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPKVIYGAKNQKFGAGGSLYDILTDA 135 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ I+Q+FF+ RR Sbjct: 136 RLNHRVEVESGLLEEECAAIMQNFFRNRR 164 >gi|160876246|ref|YP_001555562.1| zinc-binding CMP/dCMP deaminase [Shewanella baltica OS195] gi|160861768|gb|ABX50302.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS195] gi|315268435|gb|ADT95288.1| CMP/dCMP deaminase zinc-binding protein [Shewanella baltica OS678] Length = 175 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 50/146 (34%), Positives = 72/146 (49%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A+ A+ A E+PVGAV V + + I+ N + D +AHAEIL +R Sbjct: 13 DEQWMQVAMLMAEKAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLREAG 72 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 73 RLVENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHPAFN 132 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ + FFK RR Sbjct: 133 HQVEVTSGVLADACSAQLSRFFKRRR 158 >gi|258620044|ref|ZP_05715084.1| zinc-binding domain protein [Vibrio mimicus VM573] gi|258587777|gb|EEW12486.1| zinc-binding domain protein [Vibrio mimicus VM573] Length = 178 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR Sbjct: 17 QDEQFMRRAIMLAAQAEEQGEVPVGAVLVRDGEIIAEGWNCSITHHDATAHAEIEVIRKA 76 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++LS L + LYVTLEPC MCA A+ +R++R+ YGA + K G + Sbjct: 77 GKVLSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFNSQAS 136 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R +Q FF+ RR Sbjct: 137 YHYATVEKGLLEEECRAQLQAFFQRRR 163 >gi|284006748|emb|CBA72005.1| tRNA-specific adenosine deaminase [Arsenophonus nasoniae] Length = 164 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 KK +M A+ A+ A + EIPVGAV V +K+I+ N+ D AHAEI+A+R Sbjct: 5 KKDVYWMRKAILLAEKAQAKGEIPVGAVLVHEDKLIAEGWNQPISDHDPCAHAEIIALRA 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G + L L LYVTLEPC MCA A+ ARI RL YGA + K G + + Sbjct: 65 GGQYLQNYRLLNTTLYVTLEPCIMCAGAMIHARISRLVYGACDQKTGAAGSIIDVFNHPD 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI ++ FFK+RR Sbjct: 125 MNHRILVLGGILSDECSAMLSRFFKQRR 152 >gi|299134221|ref|ZP_07027414.1| CMP/dCMP deaminase zinc-binding [Afipia sp. 1NLS2] gi|298590968|gb|EFI51170.1| CMP/dCMP deaminase zinc-binding [Afipia sp. 1NLS2] Length = 148 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 76/143 (53%), Positives = 105/143 (73%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL++A+ AA E+P+G V V + +I++AGNR +D TAHAE++A+R R L Sbjct: 6 FMDLALKQAEIAASGGEVPIGCVVVHDGAVIAQAGNRTLADRDPTAHAEMVALREAARKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 +E L + DLYVTLEPCTMCA AIS ARIRRLYYGA +PKGG I++G +F+ TCHH P Sbjct: 66 GRERLTDCDLYVTLEPCTMCAGAISHARIRRLYYGALDPKGGAIDSGVRFFGSPTCHHVP 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++YP + E+++ +++DFFK RR Sbjct: 126 DVYPAVGEEQAAALLRDFFKARR 148 >gi|300311527|ref|YP_003775619.1| cytosine/adenosine deaminases protein [Herbaspirillum seropedicae SmR1] gi|300074312|gb|ADJ63711.1| cytosine/adenosine deaminases protein [Herbaspirillum seropedicae SmR1] Length = 185 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 84/148 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + M ALE+A++A E+PVGAV V + +I+ N+ D TAHAEI+A+R Sbjct: 16 EADLLHMRAALEQARHAWALGEVPVGAVVVKDGVVIATGFNQPIGKHDPTAHAEIMALRR 75 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 IL LP +LYVTLEPC MC+ A+ AR+ R+ +GA++PK G + + Sbjct: 76 AAEILGNYRLPGCELYVTLEPCVMCSGAMMHARLARVVFGAADPKTGACGSVLNLFEQDQ 135 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + Q+++DFF RR Sbjct: 136 LNHHTALLGGVMAEECGQLLKDFFAMRR 163 >gi|325688867|gb|EGD30875.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK115] Length = 156 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 86/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEVFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 66 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+QDFF++RR Sbjct: 126 RLNHRVEVEVGVLQEECVQIMQDFFRQRR 154 >gi|90410888|ref|ZP_01218902.1| Putative cytosine/adenosine deaminase [Photobacterium profundum 3TCK] gi|90328101|gb|EAS44412.1| Putative cytosine/adenosine deaminase [Photobacterium profundum 3TCK] Length = 175 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 80/146 (54%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 ++M A+E A A E+PVGAV V +++ NR+ D TAHAE++A+R Sbjct: 14 DELYMRRAIELASQAEAEGEVPVGAVVVYEGRVVGEGWNRSIGQHDATAHAEMMALRQAG 73 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 +++ L + LYVTLEPC MCA A+ +RI ++ +GAS+ K G + + + Sbjct: 74 KVIQNYRLLDATLYVTLEPCPMCAGAMVHSRIGKVIFGASDLKTGAAGSVMNLLSYDEVN 133 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ ++ R +Q FFK RR Sbjct: 134 HHVDCQAGVLDEECRAQLQAFFKRRR 159 >gi|302390826|ref|YP_003826646.1| tRNA-adenosine deaminase [Acetohalobium arabaticum DSM 5501] gi|302202903|gb|ADL11581.1| tRNA-adenosine deaminase [Acetohalobium arabaticum DSM 5501] Length = 155 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL EAQ A + E+P+GAV V +++I+R+ N +L D TAHAEILAI+ Sbjct: 3 SDDEFYMKLALAEAQKAYDKAEVPIGAVVVKGDEVIARSHNLREKLADPTAHAEILAIKE 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L +YVT+EPC MCA A+ AR+ RL YG ++ K G + + Sbjct: 63 AANTLGDWRLYNCTIYVTVEPCVMCAGALVQARVERLVYGTADLKAGAAGSILDLVQFSD 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ I E + I++ FF++ R Sbjct: 123 FNHQLEVKSAILEDECKDIMESFFQDLR 150 >gi|45442315|ref|NP_993854.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Microtus str. 91001] gi|108808356|ref|YP_652272.1| tRNA-specific adenosine deaminase [Yersinia pestis Antiqua] gi|108811379|ref|YP_647146.1| tRNA-specific adenosine deaminase [Yersinia pestis Nepal516] gi|145599538|ref|YP_001163614.1| tRNA-specific adenosine deaminase [Yersinia pestis Pestoides F] gi|149365378|ref|ZP_01887413.1| tRNA-specific adenosine deaminase [Yersinia pestis CA88-4125] gi|229838506|ref|ZP_04458665.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895510|ref|ZP_04510681.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis Pestoides A] gi|229899076|ref|ZP_04514220.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis biovar Orientalis str. India 195] gi|229901629|ref|ZP_04516751.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis Nepal516] gi|45437179|gb|AAS62731.1| putative zinc-binding protein [Yersinia pestis biovar Microtus str. 91001] gi|108775027|gb|ABG17546.1| tRNA-adenosine deaminase [Yersinia pestis Nepal516] gi|108780269|gb|ABG14327.1| tRNA-adenosine deaminase [Yersinia pestis Antiqua] gi|145211234|gb|ABP40641.1| tRNA-adenosine deaminase [Yersinia pestis Pestoides F] gi|149291791|gb|EDM41865.1| tRNA-specific adenosine deaminase [Yersinia pestis CA88-4125] gi|229681558|gb|EEO77652.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis Nepal516] gi|229688021|gb|EEO80093.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis biovar Orientalis str. India 195] gi|229694872|gb|EEO84919.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701316|gb|EEO89344.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis Pestoides A] gi|320016065|gb|ADV99636.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 187 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A A E+PVGAV VL NK+I NR D TAHAEI+A+R G Sbjct: 24 SDEYWMRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQG 83 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + Sbjct: 84 GQAVQNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGM 143 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI + FF++RR Sbjct: 144 NHQIEVSAGILAIACSHQLSAFFRQRR 170 >gi|152978402|ref|YP_001344031.1| CMP/dCMP deaminase zinc-binding [Actinobacillus succinogenes 130Z] gi|150840125|gb|ABR74096.1| CMP/dCMP deaminase zinc-binding [Actinobacillus succinogenes 130Z] Length = 182 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 62/147 (42%), Positives = 84/147 (57%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM+ AL A A + EIPVGAV V N+II N + D TAHAEI+A+R G Sbjct: 13 DEFFMNHALALADKARMLGEIPVGAVLVDEHNQIIGEGWNLSIIHSDPTAHAEIVALRRG 72 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L LYVTLEPCTMCA AI +RI+RL +GA++ K G + + F+ Sbjct: 73 AQKIQNYRLLNCTLYVTLEPCTMCAGAILHSRIKRLVFGAADEKTGAVGSRFHFFEDYKM 132 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ Q + DFFK RR Sbjct: 133 NHVIEVTGGVLAEKCGQKLSDFFKMRR 159 >gi|213612302|ref|ZP_03370128.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 163 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 56/144 (38%), Positives = 77/144 (53%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G + Sbjct: 1 YWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLV 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H Sbjct: 61 LQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHR 120 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 EI G+ ++ DFF+ RR Sbjct: 121 VEIIEGVLRDECATLLSDFFRMRR 144 >gi|297543592|ref|YP_003675894.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841367|gb|ADH59883.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 148 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 58/145 (40%), Positives = 79/145 (54%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM A+ EA + E+PVGAV V +++II R N+ D TAHAEI+AI+ C+ Sbjct: 3 NKFMKAAILEANKSYQLREVPVGAVIVKDDQIIGRGFNQKEATNDATAHAEIMAIKEACK 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + +YVTLEPC MCA AI ARI+R+Y G + K G Sbjct: 63 TLGSWRLDDCSMYVTLEPCPMCAGAILEARIKRVYIGTESDKSGAAGTVINLLNNPDLGS 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+Y GI E + ++++FFK R Sbjct: 123 KTEVYFGIMEDECKMLLENFFKTLR 147 >gi|119476440|ref|ZP_01616791.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [marine gamma proteobacterium HTCC2143] gi|119450304|gb|EAW31539.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [marine gamma proteobacterium HTCC2143] Length = 159 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 62/148 (41%), Positives = 86/148 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M A++ AQ A E+PVGAV VLN+K+I N+ L D TAHAE++AI+ Sbjct: 4 DTDHHYMEAAIKLAQKAGALGEVPVGAVVVLNDKVIGEGFNQPISLSDPTAHAEMVAIKD 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LPE LYVT+EPCTMCA A+ AR++R+ YGA+ K G E+ + Sbjct: 64 AAKALQNYRLPEATLYVTIEPCTMCAGAMVHARVKRVVYGATESKSGVAESNGCLFDNTY 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI +R +I DFF RR Sbjct: 124 LNHKVEVVGGIMAERCSNLISDFFAARR 151 >gi|92118638|ref|YP_578367.1| CMP/dCMP deaminase, zinc-binding [Nitrobacter hamburgensis X14] gi|91801532|gb|ABE63907.1| tRNA-adenosine deaminase [Nitrobacter hamburgensis X14] Length = 148 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 75/143 (52%), Positives = 99/143 (69%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE A +A E+P+G V V + ++I+ AGNR +D TAHAE+LA+R + Sbjct: 6 FMDLALEAANSAGKSGEVPIGCVIVRDGEVIAAAGNRTLTDRDPTAHAEVLALRAAAHAI 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L + DLYVTLEPCTMCA AIS ARIRRLYYGA +PKGG +++G +F+ TCHH P Sbjct: 66 GSERLTDCDLYVTLEPCTMCAGAISFARIRRLYYGAPDPKGGAVDSGVRFFAAPTCHHRP 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+YP + E + +++DFFK RR Sbjct: 126 EVYPAVGESEAATLLRDFFKARR 148 >gi|327463521|gb|EGF09840.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1057] gi|327467872|gb|EGF13362.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK330] Length = 156 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 66 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+Q+FF++RR Sbjct: 126 RLNHRVEVETGVLQEECAQIMQEFFRQRR 154 >gi|324989861|gb|EGC21804.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK353] gi|325686683|gb|EGD28709.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK72] Length = 156 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEVFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 66 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+QDFF+ RR Sbjct: 126 RLNHRVEVEVGVLQEECAQIMQDFFRNRR 154 >gi|333000872|gb|EGK20443.1| tRNA-specific adenosine deaminase [Shigella flexneri K-218] Length = 156 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 57/142 (40%), Positives = 77/142 (54%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 1 MRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + + +H E Sbjct: 61 NYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAVGSLMDVLHHPGMNHRVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I GI ++ DFF+ RR Sbjct: 121 ITEGILADECAALLSDFFRMRR 142 >gi|225860063|ref|YP_002741572.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae Taiwan19F-14] gi|298229197|ref|ZP_06962878.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254029|ref|ZP_06977615.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298501811|ref|YP_003723751.1| cytosine deaminase [Streptococcus pneumoniae TCH8431/19A] gi|225728250|gb|ACO24101.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae Taiwan19F-14] gi|298237406|gb|ADI68537.1| possible cytosine deaminase [Streptococcus pneumoniae TCH8431/19A] gi|327390436|gb|EGE88776.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Streptococcus pneumoniae GA04375] Length = 155 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 65 DANLSKESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 125 RLNHRVEVEIGILEDECAAIMQDFFRNRR 153 >gi|227510688|ref|ZP_03940737.1| possible guanine deaminase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189809|gb|EEI69876.1| possible guanine deaminase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 157 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 57/144 (39%), Positives = 82/144 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM AL EAQ A L E+P+GAV + +II R N L D AHAEI+AI Sbjct: 4 NKDEKFMKMALIEAQKAYLIGEVPIGAVITQDGQIIGRGHNLREHLNDGVAHAEIMAIEE 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 CR L L + +LYVT+EPC MC+ AI +RI R+ +GA + K G + + + + Sbjct: 64 ACRYLRSWRLVDCELYVTIEPCLMCSGAIVNSRIDRVVFGARDKKAGAVRSLYKVLEDSR 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 +H+ E+ G+ + +I++DFF Sbjct: 124 LNHNVEVLEGVLQPACSKIMKDFF 147 >gi|149006819|ref|ZP_01830505.1| deoxyuridine 5'-triphosphate nucleotidohydrolase [Streptococcus pneumoniae SP18-BS74] gi|307126250|ref|YP_003878281.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae 670-6B] gi|147761734|gb|EDK68698.1| deoxyuridine 5'-triphosphate nucleotidohydrolase [Streptococcus pneumoniae SP18-BS74] gi|306483312|gb|ADM90181.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae 670-6B] gi|332076481|gb|EGI86943.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Streptococcus pneumoniae GA17545] Length = 155 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGA N K GG + T Sbjct: 65 DANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGGAGSLYNILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 125 RLNHRVEVEIGILEDECAAIMQDFFRNRR 153 >gi|171911154|ref|ZP_02926624.1| cytidine/deoxycytidylate deaminase family protein [Verrucomicrobium spinosum DSM 4136] Length = 176 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 57/146 (39%), Positives = 83/146 (56%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL +A+ AA ++E+P+GAV V ++II+RA N+ LKD TAHAE++A+ Sbjct: 13 DEHYMREALRQARKAARQDEVPIGAVIVHGSQIIARAWNQVETLKDATAHAEMIALTQAQ 72 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L L E DLYVT EPC MCA AI R+RR+ +G + KGG + Sbjct: 73 GALGDWRLNECDLYVTKEPCPMCAGAIMHCRVRRVIFGCPDLKGGAAGGYWNLLQSPNLN 132 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H EI G+ + ++++ FF+E R Sbjct: 133 HRSEITAGVLGEECVEVLKSFFREAR 158 >gi|160894462|ref|ZP_02075238.1| hypothetical protein CLOL250_02014 [Clostridium sp. L2-50] gi|156863773|gb|EDO57204.1| hypothetical protein CLOL250_02014 [Clostridium sp. L2-50] Length = 214 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K ++M A++ AQ A ++ ++P+G V V +NK+I+R N+ K AHAE+LAI Sbjct: 57 KMYEIYMKKAIKLAQKAYVQGDVPIGCVIVKDNKVIARGYNKRNLKKTTLAHAELLAIEQ 116 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L + +YVTLEPC MCA AI ARI ++ G N K G + + ++ Sbjct: 117 ASKKLGDWRLEDCTMYVTLEPCQMCAGAIVQARIPKVVIGCMNKKAGCAGSILNMFDMSA 176 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E GI ++ +++DFF + R Sbjct: 177 FNHQVETVYGICQEECSSLMKDFFADLR 204 >gi|309800211|ref|ZP_07694392.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus infantis SK1302] gi|308116152|gb|EFO53647.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus infantis SK1302] Length = 166 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ VFM AL+EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 6 EEKEVFMREALKEAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIEN 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L+VT+EPC MC+ AI LARI ++ YGA N K G + T Sbjct: 66 ANVREESWRLLDCTLFVTIEPCVMCSGAIGLARIPKVVYGAKNQKFGAAGSLYDILTDER 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+Q+FF+ RR Sbjct: 126 LNHRVEVETGILESECAGIMQEFFRNRR 153 >gi|291520377|emb|CBK75598.1| Cytosine/adenosine deaminases [Butyrivibrio fibrisolvens 16/4] Length = 179 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +K +M+ AL+EA+ A NE+P+G V V N+KII+R NR K V AHAEI AI+ Sbjct: 24 LKTYEKYMAQALKEARKAYDINEVPIGCVIVQNDKIIARGYNRRNTDKSVLAHAEIAAIQ 83 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L + LYVTLEPC MCA AI ARI R+ GA NPK G + + Sbjct: 84 KACKKTGDWRLEDCTLYVTLEPCQMCAGAIVQARIPRVVVGAMNPKAGCAGSILNILQMH 143 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ + + +++++ FF+E R Sbjct: 144 QFNHVCDLETDVLGEECKEMMKSFFEELR 172 >gi|84388906|ref|ZP_00991114.1| Cytosine/adenosine deaminase [Vibrio splendidus 12B01] gi|84376970|gb|EAP93842.1| Cytosine/adenosine deaminase [Vibrio splendidus 12B01] Length = 194 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +FM A+E A+ A E+PVGAV V +IIS NR+ D TAHAEI +R Sbjct: 9 QDEIFMRRAIEVAKQAEKEGEVPVGAVLVKEGEIISEGWNRSIGSHDATAHAEIETLRKA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 69 GQALENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFESQAS 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ EQ R +Q FFK RR Sbjct: 129 YHYADVENGLLEQECRDQLQAFFKRRR 155 >gi|163814785|ref|ZP_02206174.1| hypothetical protein COPEUT_00936 [Coprococcus eutactus ATCC 27759] gi|158450420|gb|EDP27415.1| hypothetical protein COPEUT_00936 [Coprococcus eutactus ATCC 27759] Length = 181 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 54/146 (36%), Positives = 77/146 (52%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL +A+ A ++P+G V V KII+R N+ K AHAEILAI Sbjct: 29 HEKYMDKALAQARRAYANGDVPIGCVIVHEGKIIARGFNKRNLKKTTLAHAEILAIEQAS 88 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L L E +YVTLEPC MCA AI ARI ++ G NPK G + + + Sbjct: 89 KKLGDWRLEECTMYVTLEPCQMCAGAIVQARIPKVVIGCMNPKAGCAGSIINLLQMQQFN 148 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ EQ ++++FFK+ R Sbjct: 149 HQVDVIRGVREQECSGMMKEFFKDLR 174 >gi|324992584|gb|EGC24505.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK405] Length = 156 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 66 EANRHENSWRLLGTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+Q+FF++RR Sbjct: 126 RLNHRVEVETGVLQEECAQIMQEFFRQRR 154 >gi|229542244|ref|ZP_04431304.1| CMP/dCMP deaminase zinc-binding [Bacillus coagulans 36D1] gi|229326664|gb|EEN92339.1| CMP/dCMP deaminase zinc-binding [Bacillus coagulans 36D1] Length = 169 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M A++EA A E+P+GAV VL+ K+I+ A N + AHAE+LAI Sbjct: 3 NRDEYYMRLAIQEAVKAQRLREVPIGAVIVLDEKVIAAAHNLRETTQRAAAHAELLAIEK 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C + L +LYVTLEPC MC+ A+ +RI+R+ YGA +PK G + Sbjct: 63 ACEVTGSWRLENAELYVTLEPCPMCSGAVLQSRIKRVVYGAKDPKAGCAGSLMNLLEDGR 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E ++++ FF+ R Sbjct: 123 FNHRSEVVSGVLETECGELLRSFFRSLR 150 >gi|270291666|ref|ZP_06197882.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus sp. M143] gi|270279751|gb|EFA25592.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus sp. M143] Length = 155 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL EA+ A +EIP+G V V N +II R N EL+ HAEI+AI Sbjct: 6 EEKEAFMREALREAEIALEHDEIPIGCVIVKNGEIIGRGHNAREELQRAVMHAEIMAIEN 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 66 ANASEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDER 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E I+QDFF+ RR Sbjct: 126 LNHRVEVETGVLESECAAIMQDFFRNRR 153 >gi|254719939|ref|ZP_05181750.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp. 83/13] gi|265984947|ref|ZP_06097682.1| CMP/dCMP deaminase zinc-binding protein [Brucella sp. 83/13] gi|306838528|ref|ZP_07471366.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp. NF 2653] gi|264663539|gb|EEZ33800.1| CMP/dCMP deaminase zinc-binding protein [Brucella sp. 83/13] gi|306406395|gb|EFM62636.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp. NF 2653] Length = 157 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 93/142 (65%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A R E+P+GAV V + +II+RAGNR RE DVTAHAEIL IR +L Sbjct: 16 MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEVLG 75 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT TCHH+PE Sbjct: 76 SERLVDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 135 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IYPG E +R+I++DFF+E+R Sbjct: 136 IYPGFCEADARKILKDFFREKR 157 >gi|73541535|ref|YP_296055.1| tRNA-adenosine deaminase [Ralstonia eutropha JMP134] gi|72118948|gb|AAZ61211.1| tRNA-adenosine deaminase [Ralstonia eutropha JMP134] Length = 177 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 87/149 (58%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + ++ A++EA+ A E+PVGAV V N+ II+R N + D +AHAE+ A+R Sbjct: 10 IARDERYLRAAMDEARLAEAAGEVPVGAVVVWNDAIIARGHNLPIKSMDPSAHAEMQALR 69 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L +PE +LYVTLEPC MC+ AI AR+R + +GAS+PK G + + A Sbjct: 70 AAAQVLGNYRMPECELYVTLEPCAMCSGAILHARLRHVVFGASDPKTGAAGSVVNLFEQA 129 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ Q+++DFF RR Sbjct: 130 QLNHQTTITGGVLADECGQMLKDFFGARR 158 >gi|222152093|ref|YP_002561253.1| hypothetical protein MCCL_1850 [Macrococcus caseolyticus JCSC5402] gi|222121222|dbj|BAH18557.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 161 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 50/147 (34%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +FM A++EA+ A NE+P+GAV + + ++I R N ++ HAE++AI Sbjct: 2 NHEIFMQMAIDEAKKAYKINEVPIGAVVIKHGEVIGRGHNLRESSQNPLMHAEVVAINEA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L E LYVTLEPC MC+ AI ++RI + YGA + KGG + + Sbjct: 62 SKNIGSWRLEECVLYVTLEPCVMCSGAIVMSRIPTVVYGAHDAKGGCSGSLMNLLHESRF 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI + +++DFFK R Sbjct: 122 NHQATVIAGIKHEECSMLLKDFFKSLR 148 >gi|315122181|ref|YP_004062670.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495583|gb|ADR52182.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 150 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 125/149 (83%), Positives = 132/149 (88%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M N FMS ALEEA NA+LRNEIPVGAVAVLNNKII RAGNRNRELKDVTAHAEILAIR Sbjct: 1 MILKNNFMSLALEEALNASLRNEIPVGAVAVLNNKIIGRAGNRNRELKDVTAHAEILAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M C+ LSQE LP VDLYVTLEPCTMCAAAIS ARIRRLYYGASNPKGG IENG +FYTLA Sbjct: 61 MSCQTLSQETLPGVDLYVTLEPCTMCAAAISFARIRRLYYGASNPKGGAIENGIEFYTLA 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCHH PEIY GI+E+RS+QI+Q FFKERR Sbjct: 121 TCHHKPEIYSGIAEKRSKQIMQKFFKERR 149 >gi|22125207|ref|NP_668630.1| tRNA-specific adenosine deaminase [Yersinia pestis KIM 10] gi|162421541|ref|YP_001607945.1| tRNA-specific adenosine deaminase [Yersinia pestis Angola] gi|165928230|ref|ZP_02224062.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Orientalis str. F1991016] gi|165939213|ref|ZP_02227763.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Orientalis str. IP275] gi|166008235|ref|ZP_02229133.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua str. E1979001] gi|166212350|ref|ZP_02238385.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua str. B42003004] gi|167399598|ref|ZP_02305122.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421139|ref|ZP_02312892.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423684|ref|ZP_02315437.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467717|ref|ZP_02332421.1| tRNA-specific adenosine deaminase [Yersinia pestis FV-1] gi|270489818|ref|ZP_06206892.1| cytidine and deoxycytidylate deaminase zinc-binding region [Yersinia pestis KIM D27] gi|294504520|ref|YP_003568582.1| deaminase [Yersinia pestis Z176003] gi|21958073|gb|AAM84881.1|AE013733_2 putative deaminase [Yersinia pestis KIM 10] gi|162354356|gb|ABX88304.1| tRNA-specific adenosine deaminase [Yersinia pestis Angola] gi|165912813|gb|EDR31440.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Orientalis str. IP275] gi|165919737|gb|EDR37070.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Orientalis str. F1991016] gi|165992617|gb|EDR44918.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua str. E1979001] gi|166206281|gb|EDR50761.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua str. B42003004] gi|166960628|gb|EDR56649.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167052102|gb|EDR63510.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057854|gb|EDR67600.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|262362488|gb|ACY59209.1| deaminase [Yersinia pestis D106004] gi|262366507|gb|ACY63064.1| deaminase [Yersinia pestis D182038] gi|270338322|gb|EFA49099.1| cytidine and deoxycytidylate deaminase zinc-binding region [Yersinia pestis KIM D27] gi|294354979|gb|ADE65320.1| deaminase [Yersinia pestis Z176003] Length = 200 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A A E+PVGAV VL NK+I NR D TAHAEI+A+R G Sbjct: 37 SDEYWMRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQG 96 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + Sbjct: 97 GQAVQNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGM 156 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI + FF++RR Sbjct: 157 NHQIEVSAGILAIACSHQLSAFFRQRR 183 >gi|291085019|ref|ZP_06351792.2| tRNA-specific adenosine deaminase [Citrobacter youngae ATCC 29220] gi|291071670|gb|EFE09779.1| tRNA-specific adenosine deaminase [Citrobacter youngae ATCC 29220] Length = 154 Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 56/142 (39%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G +L Sbjct: 1 MRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGHHDPTAHAEIMALRQGGLVLQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H E Sbjct: 61 NYRLLDATLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ ++ DFF+ RR Sbjct: 121 VTEGVLRDECATLLSDFFRMRR 142 >gi|289577296|ref|YP_003475923.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter italicus Ab9] gi|289527009|gb|ADD01361.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter italicus Ab9] Length = 148 Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 59/145 (40%), Positives = 80/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM A+ EA + E+PVGAV V +++II R N+ DVTAHAEI+AI+ C+ Sbjct: 3 NKFMKAAILEANKSYQLREVPVGAVIVKDDQIIGRGFNQKEATNDVTAHAEIMAIKEACK 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + +YVTLEPC MCA AI ARI+R+Y G + K G Sbjct: 63 TLGSWRLDDCSIYVTLEPCPMCAGAILEARIKRVYIGTESDKSGAAGTVINLLNNPDLGS 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+Y GI E + ++++FFK R Sbjct: 123 KTEVYFGIMEDECKMLLENFFKTLR 147 >gi|148985360|ref|ZP_01818565.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP3-BS71] gi|148986205|ref|ZP_01819157.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP3-BS71] gi|148995215|ref|ZP_01824050.1| deoxyuridine 5'-triphosphate nucleotidohydrolase [Streptococcus pneumoniae SP9-BS68] gi|149004172|ref|ZP_01828969.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP14-BS69] gi|149023458|ref|ZP_01836047.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP23-BS72] gi|168483689|ref|ZP_02708641.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae CDC1873-00] gi|168486729|ref|ZP_02711237.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae CDC1087-00] gi|169833520|ref|YP_001693493.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae Hungary19A-6] gi|221230966|ref|YP_002510118.1| deaminase [Streptococcus pneumoniae ATCC 700669] gi|225853633|ref|YP_002735145.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae JJA] gi|225857883|ref|YP_002739393.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae 70585] gi|237650015|ref|ZP_04524267.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae CCRI 1974] gi|237822610|ref|ZP_04598455.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae CCRI 1974M2] gi|147757834|gb|EDK64845.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP14-BS69] gi|147921819|gb|EDK72947.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP3-BS71] gi|147922318|gb|EDK73438.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP3-BS71] gi|147926817|gb|EDK77872.1| deoxyuridine 5'-triphosphate nucleotidohydrolase [Streptococcus pneumoniae SP9-BS68] gi|147929781|gb|EDK80771.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP23-BS72] gi|168996022|gb|ACA36634.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae Hungary19A-6] gi|172043028|gb|EDT51074.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae CDC1873-00] gi|183570307|gb|EDT90835.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae CDC1087-00] gi|220673426|emb|CAR67886.1| putative deaminase [Streptococcus pneumoniae ATCC 700669] gi|225721389|gb|ACO17243.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae 70585] gi|225723035|gb|ACO18888.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae JJA] gi|301793341|emb|CBW35702.1| putative deaminase [Streptococcus pneumoniae INV104] gi|301799211|emb|CBW31724.1| putative deaminase [Streptococcus pneumoniae OXC141] gi|332075677|gb|EGI86144.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Streptococcus pneumoniae GA17570] gi|332204048|gb|EGJ18113.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Streptococcus pneumoniae GA47901] gi|332205041|gb|EGJ19104.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Streptococcus pneumoniae GA47368] Length = 155 Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 65 DANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 125 RLNHRVEVEIGILEDECAAIMQDFFRNRR 153 >gi|225026664|ref|ZP_03715856.1| hypothetical protein EUBHAL_00916 [Eubacterium hallii DSM 3353] gi|224956034|gb|EEG37243.1| hypothetical protein EUBHAL_00916 [Eubacterium hallii DSM 3353] Length = 178 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 83/148 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A+++A+ A ++P+G V V + KII+R N+ + K V AHAE+LA++ Sbjct: 10 TEDEKFMKEAIKQAKKAEAIGDVPIGCVIVHDGKIIARGYNKRNKDKTVLAHAELLAMKK 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C+ L L + +Y+TLEPC MCA AI AR+ R+ G+ N K G + + Sbjct: 70 ACKKLGDWRLEDCTMYITLEPCQMCAGAIVQARVTRVVIGSMNAKAGCGGSILNLLEMQE 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ +++ FF++ R Sbjct: 130 FNHQAEVERGVLQEECSEMLSAFFRKLR 157 >gi|153824574|ref|ZP_01977241.1| zinc-binding domain protein [Vibrio cholerae MZO-2] gi|149741792|gb|EDM55821.1| zinc-binding domain protein [Vibrio cholerae MZO-2] Length = 193 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR Sbjct: 27 QDEQFMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + LS L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ Sbjct: 87 GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAA 146 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R +Q FF+ RR Sbjct: 147 YHYATVEKGLLEEECRAQLQAFFQRRR 173 >gi|75676735|ref|YP_319156.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Nitrobacter winogradskyi Nb-255] gi|74421605|gb|ABA05804.1| tRNA-adenosine deaminase [Nitrobacter winogradskyi Nb-255] Length = 148 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 79/143 (55%), Positives = 100/143 (69%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE A+ A E+P+G V V + +II+ AGNR +D TAHAE+LA+R +L Sbjct: 6 FMDMALEAAEKAGQAGEVPIGCVIVRDGEIIAAAGNRTLTDRDPTAHAEVLALRAAAHVL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPCTMCAAAIS ARIRRLYYGAS+PKGG +E G +F+ TCHH P Sbjct: 66 GSERLTGCDLYVTLEPCTMCAAAISFARIRRLYYGASDPKGGAVEYGVRFFAAPTCHHRP 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y + E ++ +++DFFK RR Sbjct: 126 EVYSSVGESQAATLLRDFFKARR 148 >gi|315633684|ref|ZP_07888974.1| tRNA-specific adenosine deaminase [Aggregatibacter segnis ATCC 33393] gi|315477726|gb|EFU68468.1| tRNA-specific adenosine deaminase [Aggregatibacter segnis ATCC 33393] Length = 175 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 61/147 (41%), Positives = 82/147 (55%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL A A EIPVGAV V +II N + D TAHAEI+A+R G Sbjct: 9 DEQFMRHALMLADKAEALGEIPVGAVLVSEEGEIIGEGWNLSIIDSDPTAHAEIVALRQG 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L LYVTLEPCTMCA AI +RI+RL +GA++ K G + + F+ Sbjct: 69 GQRLQNYRLLNATLYVTLEPCTMCAGAILHSRIKRLVFGAADYKTGAVGSRFHFFDDYKM 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ EI G+ +Q + + FF++RR Sbjct: 129 NHAIEITGGVLQQECSEKLSAFFQKRR 155 >gi|210631978|ref|ZP_03297143.1| hypothetical protein COLSTE_01034 [Collinsella stercoris DSM 13279] gi|210159780|gb|EEA90751.1| hypothetical protein COLSTE_01034 [Collinsella stercoris DSM 13279] Length = 647 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 58/146 (39%), Positives = 82/146 (56%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FMS ALEEA+ AA E+P+GAV V ++I+RA NR +D +AHAE A+ Sbjct: 8 DERFMSMALEEARAAASIGEVPIGAVVVHEGRVIARAHNRREADEDPSAHAEFAAMMEAS 67 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R L + L +YVTLEPC MCA + ARI R +GA +PKGG + + Sbjct: 68 RALGRWRLTGCTVYVTLEPCLMCAGLMVNARIDRCVFGAYDPKGGAVGTLYDVSCDERLN 127 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H+ ++ PG+ E +++ FF+E R Sbjct: 128 HAFDVTPGVLEDECAAVLRAFFQELR 153 >gi|15899968|ref|NP_344572.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae TIGR4] gi|111657255|ref|ZP_01408023.1| hypothetical protein SpneT_02001535 [Streptococcus pneumoniae TIGR4] gi|148996424|ref|ZP_01824142.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP11-BS70] gi|149010880|ref|ZP_01832185.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP19-BS75] gi|168492307|ref|ZP_02716450.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae CDC0288-04] gi|168576944|ref|ZP_02722786.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae MLV-016] gi|225855809|ref|YP_002737320.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae P1031] gi|307066702|ref|YP_003875668.1| cytosine/adenosine deaminase [Streptococcus pneumoniae AP200] gi|14971484|gb|AAK74212.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae TIGR4] gi|147756999|gb|EDK64038.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP11-BS70] gi|147764516|gb|EDK71446.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP19-BS75] gi|183573448|gb|EDT93976.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae CDC0288-04] gi|183577431|gb|EDT97959.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae MLV-016] gi|225725405|gb|ACO21257.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae P1031] gi|306408239|gb|ADM83666.1| Cytosine/adenosine deaminase [Streptococcus pneumoniae AP200] gi|332077311|gb|EGI87772.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Streptococcus pneumoniae GA41301] gi|332201950|gb|EGJ16019.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Streptococcus pneumoniae GA41317] Length = 155 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 65 DANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYNILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 125 RLNHRVEVEIGILEDECAAIMQDFFRNRR 153 >gi|307706899|ref|ZP_07643700.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK321] gi|307617691|gb|EFN96857.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK321] Length = 155 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ VFM AL EA+ A +EIP+G V V +II R N EL+ HAEI+AI Sbjct: 6 EEKEVFMREALREAEIALEHDEIPIGCVIVKEGEIIGRGHNAREELQRAVMHAEIMAIEN 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 66 ANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDER 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 126 LNHRVEVETGILEDECAAIMQDFFRNRR 153 >gi|327459989|gb|EGF06328.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1] Length = 156 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 66 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGAANQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+QDFF+ RR Sbjct: 126 RLNHRVEVETGVLQEECAQIMQDFFRNRR 154 >gi|15640880|ref|NP_230511.1| yfhC protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121585742|ref|ZP_01675537.1| zinc-binding domain protein [Vibrio cholerae 2740-80] gi|121728321|ref|ZP_01681351.1| zinc-binding domain protein [Vibrio cholerae V52] gi|147675155|ref|YP_001216345.1| zinc-binding domain-containing protein [Vibrio cholerae O395] gi|153802057|ref|ZP_01956643.1| zinc-binding domain protein [Vibrio cholerae MZO-3] gi|153819008|ref|ZP_01971675.1| zinc-binding domain protein [Vibrio cholerae NCTC 8457] gi|153823068|ref|ZP_01975735.1| zinc-binding domain protein [Vibrio cholerae B33] gi|227081040|ref|YP_002809591.1| yfhC protein [Vibrio cholerae M66-2] gi|229505525|ref|ZP_04395035.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae BX 330286] gi|229510804|ref|ZP_04400283.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae B33] gi|229517925|ref|ZP_04407369.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae RC9] gi|229608545|ref|YP_002879193.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae MJ-1236] gi|254848002|ref|ZP_05237352.1| zinc-binding domain-containing protein [Vibrio cholerae MO10] gi|298499008|ref|ZP_07008815.1| zinc-binding domain-containing protein [Vibrio cholerae MAK 757] gi|9655317|gb|AAF94026.1| yfhC protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121550105|gb|EAX60121.1| zinc-binding domain protein [Vibrio cholerae 2740-80] gi|121629376|gb|EAX61806.1| zinc-binding domain protein [Vibrio cholerae V52] gi|124122416|gb|EAY41159.1| zinc-binding domain protein [Vibrio cholerae MZO-3] gi|126510441|gb|EAZ73035.1| zinc-binding domain protein [Vibrio cholerae NCTC 8457] gi|126519394|gb|EAZ76617.1| zinc-binding domain protein [Vibrio cholerae B33] gi|146317038|gb|ABQ21577.1| zinc-binding domain protein [Vibrio cholerae O395] gi|227008928|gb|ACP05140.1| yfhC protein [Vibrio cholerae M66-2] gi|227012684|gb|ACP08894.1| yfhC protein [Vibrio cholerae O395] gi|229344640|gb|EEO09614.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae RC9] gi|229350769|gb|EEO15710.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae B33] gi|229357748|gb|EEO22665.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae BX 330286] gi|229371200|gb|ACQ61623.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae MJ-1236] gi|254843707|gb|EET22121.1| zinc-binding domain-containing protein [Vibrio cholerae MO10] gi|297543341|gb|EFH79391.1| zinc-binding domain-containing protein [Vibrio cholerae MAK 757] Length = 193 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR Sbjct: 27 QDEQFMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + LS L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ Sbjct: 87 GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAA 146 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R +Q FF+ RR Sbjct: 147 YHYATVEKGLLEEECRAQLQAFFQRRR 173 >gi|254225102|ref|ZP_04918716.1| zinc-binding domain protein [Vibrio cholerae V51] gi|125622489|gb|EAZ50809.1| zinc-binding domain protein [Vibrio cholerae V51] Length = 193 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR Sbjct: 27 QDEQFMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + LS L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ Sbjct: 87 GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAA 146 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R +Q FF+ RR Sbjct: 147 YHYATVEKGLLEEECRAQLQAFFQRRR 173 >gi|118590701|ref|ZP_01548102.1| cytidine and deoxycytidylate deaminase [Stappia aggregata IAM 12614] gi|118436677|gb|EAV43317.1| cytidine and deoxycytidylate deaminase [Stappia aggregata IAM 12614] Length = 154 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 80/143 (55%), Positives = 103/143 (72%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA AA R E+PVGAV V +I+R GNR EL D TAHAE+L IR C + Sbjct: 12 FMDLALEEAVKAADRGEVPVGAVLVRGGDVIARDGNRTLELNDPTAHAEVLVIRSACALA 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + LP+ DLYVTLEPC MCA AIS ARIRRLYYGA + KGG +++GT+F+ TCHH+P Sbjct: 72 GSQRLPDCDLYVTLEPCPMCAGAISFARIRRLYYGAGDEKGGAVDHGTRFFCQPTCHHAP 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++Y GI E R+ ++++ FF+ +R Sbjct: 132 DVYSGIGETRAGELLKTFFQAKR 154 >gi|260913765|ref|ZP_05920241.1| tRNA-specific adenosine deaminase [Pasteurella dagmatis ATCC 43325] gi|260632304|gb|EEX50479.1| tRNA-specific adenosine deaminase [Pasteurella dagmatis ATCC 43325] Length = 170 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 81/147 (55%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M ALE A A EIPVGAV V ++ N + D TAHAEI+A+R G Sbjct: 6 DEKWMRYALELADKAEQLGEIPVGAVLVDEEGNVLGEGWNLSIIESDPTAHAEIVALRQG 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L LYVTLEPCTMCA AI +RI+RL +GAS+ K G + + F+ Sbjct: 66 GKTLQNYRLVNTTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAVGSRFHFFDDYKM 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ EI G+ + Q + FF++RR Sbjct: 126 NHTVEITAGVLQDECSQKLSVFFQKRR 152 >gi|332754174|gb|EGJ84543.1| tRNA-specific adenosine deaminase [Shigella flexneri K-671] Length = 156 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 57/142 (40%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ A E+PVGAV V NN++I NR D TAHAEI+A+R G ++ Sbjct: 1 MRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H E Sbjct: 61 NYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I GI ++ DFF+ RR Sbjct: 121 ITEGILADECAALLSDFFRMRR 142 >gi|262402782|ref|ZP_06079343.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. RC586] gi|262351564|gb|EEZ00697.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. RC586] Length = 170 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A+E A A E+PVGAV V KII+ N + +D TAHAEI IR Sbjct: 8 TQDEQFMRRAIELAAQAEALGEVPVGAVLVQEGKIIAEGWNCSITHQDATAHAEIEVIRE 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 ++LS L + LYVTLEPC MCA A+ +R++R+ YGA + K G + Sbjct: 68 AGKVLSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFNSQA 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R +Q FF+ RR Sbjct: 128 SYHYATVEKGLLEEECRTQLQAFFQRRR 155 >gi|125718966|ref|YP_001036099.1| hypothetical protein SSA_2184 [Streptococcus sanguinis SK36] gi|125498883|gb|ABN45549.1| Conserved hypothetical protein [Streptococcus sanguinis SK36] Length = 156 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 66 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+Q+FF++RR Sbjct: 126 RLNHRVEVEAGVLQEECAQIMQEFFRQRR 154 >gi|324995886|gb|EGC27797.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK678] gi|325695392|gb|EGD37292.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK150] gi|327488579|gb|EGF20379.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1058] gi|328944679|gb|EGG38840.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1087] Length = 156 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEAFMREALKEAEIALAYDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 66 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+Q+FF++RR Sbjct: 126 RLNHRVEVETGVLQEECAQIMQEFFRQRR 154 >gi|62317152|ref|YP_223005.1| cytidine and deoxycytidylate deaminase family protein [Brucella abortus bv. 1 str. 9-941] gi|83269135|ref|YP_418426.1| cytidine/deoxycytidylate deaminase [Brucella melitensis biovar Abortus 2308] gi|161620282|ref|YP_001594168.1| CMP/dCMP deaminase zinc-binding [Brucella canis ATCC 23365] gi|189022411|ref|YP_001932152.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Brucella abortus S19] gi|254691365|ref|ZP_05154619.1| cytidine and deoxycytidylate deaminase family protein [Brucella abortus bv. 6 str. 870] gi|254695335|ref|ZP_05157163.1| cytidine and deoxycytidylate deaminase family protein [Brucella abortus bv. 3 str. Tulya] gi|254698431|ref|ZP_05160259.1| cytidine and deoxycytidylate deaminase family protein [Brucella abortus bv. 2 str. 86/8/59] gi|254699495|ref|ZP_05161323.1| cytidine and deoxycytidylate deaminase family protein [Brucella suis bv. 5 str. 513] gi|254702619|ref|ZP_05164447.1| cytidine and deoxycytidylate deaminase family protein [Brucella suis bv. 3 str. 686] gi|254706250|ref|ZP_05168078.1| cytidine and deoxycytidylate deaminase family protein [Brucella pinnipedialis M163/99/10] gi|254711456|ref|ZP_05173267.1| cytidine and deoxycytidylate deaminase family protein [Brucella pinnipedialis B2/94] gi|254712059|ref|ZP_05173870.1| cytidine and deoxycytidylate deaminase family protein [Brucella ceti M644/93/1] gi|254715129|ref|ZP_05176940.1| cytidine and deoxycytidylate deaminase family protein [Brucella ceti M13/05/1] gi|254731878|ref|ZP_05190456.1| cytidine and deoxycytidylate deaminase family protein [Brucella abortus bv. 4 str. 292] gi|256014990|ref|YP_003104999.1| cytidine and deoxycytidylate deaminase family protein [Brucella microti CCM 4915] gi|256029913|ref|ZP_05443527.1| cytidine and deoxycytidylate deaminase family protein [Brucella pinnipedialis M292/94/1] gi|256043124|ref|ZP_05446066.1| cytidine and deoxycytidylate deaminase family protein [Brucella melitensis bv. 1 str. Rev.1] gi|256059562|ref|ZP_05449761.1| cytidine and deoxycytidylate deaminase family protein [Brucella neotomae 5K33] gi|256111894|ref|ZP_05452850.1| cytidine and deoxycytidylate deaminase family protein [Brucella melitensis bv. 3 str. Ether] gi|256158082|ref|ZP_05456000.1| cytidine and deoxycytidylate deaminase family protein [Brucella ceti M490/95/1] gi|256252963|ref|ZP_05458499.1| cytidine and deoxycytidylate deaminase family protein [Brucella ceti B1/94] gi|256256550|ref|ZP_05462086.1| cytidine and deoxycytidylate deaminase family protein [Brucella abortus bv. 9 str. C68] gi|260166985|ref|ZP_05753796.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp. F5/99] gi|260544385|ref|ZP_05820206.1| cytidine/deoxycytidylate deaminase [Brucella abortus NCTC 8038] gi|260564346|ref|ZP_05834831.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 1 str. 16M] gi|260568473|ref|ZP_05838942.1| cytidine/deoxycytidylate deaminase [Brucella suis bv. 4 str. 40] gi|260756977|ref|ZP_05869325.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 6 str. 870] gi|260759649|ref|ZP_05871997.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 4 str. 292] gi|260762892|ref|ZP_05875224.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 2 str. 86/8/59] gi|260882788|ref|ZP_05894402.1| cytidine/deoxycytidylate deaminase [Brucella abortus bv. 9 str. C68] gi|261215706|ref|ZP_05929987.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 3 str. Tulya] gi|261216837|ref|ZP_05931118.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M13/05/1] gi|261220056|ref|ZP_05934337.1| cytidine/deoxycytidylate deaminase [Brucella ceti B1/94] gi|261313693|ref|ZP_05952890.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis M163/99/10] gi|261319065|ref|ZP_05958262.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis B2/94] gi|261319704|ref|ZP_05958901.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M644/93/1] gi|261323530|ref|ZP_05962727.1| cytidine/deoxycytidylate deaminase [Brucella neotomae 5K33] gi|261749950|ref|ZP_05993659.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 5 str. 513] gi|261753203|ref|ZP_05996912.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 3 str. 686] gi|261756372|ref|ZP_06000081.1| cytidine/deoxycytidylate deaminase [Brucella sp. F5/99] gi|265986931|ref|ZP_06099488.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis M292/94/1] gi|265989556|ref|ZP_06102113.1| CMP/dCMP deaminase zinc-binding protein [Brucella melitensis bv. 1 str. Rev.1] gi|265993342|ref|ZP_06105899.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 3 str. Ether] gi|265996597|ref|ZP_06109154.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M490/95/1] gi|294853219|ref|ZP_06793891.1| cytosine deaminase [Brucella sp. NVSL 07-0026] gi|62197345|gb|AAX75644.1| cytidine and deoxycytidylate deaminase family protein [Brucella abortus bv. 1 str. 9-941] gi|82939409|emb|CAJ12363.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Brucella melitensis biovar Abortus 2308] gi|161337093|gb|ABX63397.1| CMP/dCMP deaminase zinc-binding [Brucella canis ATCC 23365] gi|189020985|gb|ACD73706.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Brucella abortus S19] gi|255997650|gb|ACU49337.1| cytidine and deoxycytidylate deaminase family protein [Brucella microti CCM 4915] gi|260097656|gb|EEW81530.1| cytidine/deoxycytidylate deaminase [Brucella abortus NCTC 8038] gi|260151989|gb|EEW87082.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 1 str. 16M] gi|260155138|gb|EEW90219.1| cytidine/deoxycytidylate deaminase [Brucella suis bv. 4 str. 40] gi|260669967|gb|EEX56907.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 4 str. 292] gi|260673313|gb|EEX60134.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 2 str. 86/8/59] gi|260677085|gb|EEX63906.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 6 str. 870] gi|260872316|gb|EEX79385.1| cytidine/deoxycytidylate deaminase [Brucella abortus bv. 9 str. C68] gi|260917313|gb|EEX84174.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 3 str. Tulya] gi|260918640|gb|EEX85293.1| cytidine/deoxycytidylate deaminase [Brucella ceti B1/94] gi|260921926|gb|EEX88494.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M13/05/1] gi|261292394|gb|EEX95890.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M644/93/1] gi|261298288|gb|EEY01785.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis B2/94] gi|261299510|gb|EEY03007.1| cytidine/deoxycytidylate deaminase [Brucella neotomae 5K33] gi|261302719|gb|EEY06216.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis M163/99/10] gi|261736356|gb|EEY24352.1| cytidine/deoxycytidylate deaminase [Brucella sp. F5/99] gi|261739703|gb|EEY27629.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 5 str. 513] gi|261742956|gb|EEY30882.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 3 str. 686] gi|262550894|gb|EEZ07055.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M490/95/1] gi|262764212|gb|EEZ10244.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 3 str. Ether] gi|263000225|gb|EEZ12915.1| CMP/dCMP deaminase zinc-binding protein [Brucella melitensis bv. 1 str. Rev.1] gi|264659128|gb|EEZ29389.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis M292/94/1] gi|294818874|gb|EFG35874.1| cytosine deaminase [Brucella sp. NVSL 07-0026] Length = 157 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 93/142 (65%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A R E+P+GAV V + +II+RAGNR RE DVTAHAEIL IR +L Sbjct: 16 MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 75 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT TCHH+PE Sbjct: 76 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 135 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IYPG E +R+I++DFF+E+R Sbjct: 136 IYPGFCEADARKILKDFFREKR 157 >gi|289166926|ref|YP_003445193.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus mitis B6] gi|288906491|emb|CBJ21321.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus mitis B6] Length = 155 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ VFM AL EA A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 6 EEKEVFMREALREADIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIEN 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 66 ANLSEESWRLIDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDER 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ GI E I+QDFF+ RR Sbjct: 126 LNHRVDVETGILEDECAAIMQDFFRNRR 153 >gi|292670885|ref|ZP_06604311.1| deaminase [Selenomonas noxia ATCC 43541] gi|292647506|gb|EFF65478.1| deaminase [Selenomonas noxia ATCC 43541] Length = 179 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 64/150 (42%), Positives = 87/150 (58%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M M ALEEA++A E+P+GAV + +I+R N D TAHAE++AI Sbjct: 26 MLDDITGMRMALEEAKHAYALGEVPIGAVIIDKAGTLIARGCNLRETQHDATAHAELIAI 85 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R C+ L + L E+ LYVT+EPC MCA AI ++RI R+ YG+++ K GG E+ + Sbjct: 86 RRACKSLGRWRLTEMTLYVTIEPCPMCAGAIVMSRISRIVYGSTDRKAGGCESLFNITSC 145 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PEI GI II+ FFKERR Sbjct: 146 PGLNHQPEICAGILADECSAIIKKFFKERR 175 >gi|323350632|ref|ZP_08086294.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis VMC66] gi|322123314|gb|EFX94999.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis VMC66] Length = 156 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V KII R N EL+ HAEI+AI Sbjct: 6 IEEKEDFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L+VT+EPC MC+ AI LARI + YGA+N K G + T Sbjct: 66 EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ QI+QDFF+ RR Sbjct: 126 RLNHRVEVETGVLQEDCAQIMQDFFRNRR 154 >gi|118586639|ref|ZP_01544079.1| cytidine/deoxycytidylate deaminase [Oenococcus oeni ATCC BAA-1163] gi|118432954|gb|EAV39680.1| cytidine/deoxycytidylate deaminase [Oenococcus oeni ATCC BAA-1163] Length = 156 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 58/145 (40%), Positives = 86/145 (59%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL++AQ A E+P+GAV V +N++I+ NR + TAHAE L I R Sbjct: 9 EEFMQLALKQAQTAFDEGEVPIGAVLVKDNQVIAADHNRKEQSGIATAHAEKLVIEGANR 68 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + L+VT+EPC MC AI +RI RL+YGA++PK GG+ + + +H Sbjct: 69 SLGDWRLNDCSLFVTIEPCVMCCGAIIQSRIPRLFYGAADPKFGGVSSLYHLLEDSRSNH 128 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+YP + ++S ++QDFF++ R Sbjct: 129 FVEVYPDVLAKQSADLMQDFFRKLR 153 >gi|20428822|emb|CAD21697.1| hypothetical protein [Azoarcus evansii] Length = 154 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 81/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M ALE+A+ A +E+PVGAV VL+ +I+ R N+ D TAHAE++A+R Sbjct: 2 NDEDYMRVALEQAREAGSCDEVPVGAVVVLDGEIVGRGFNQPIGRHDPTAHAEVMALRDA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L LP +LYVTLEPC MC+ AI +RI R+ +GA +PK G + + + Sbjct: 62 AARLGNYRLPGCELYVTLEPCAMCSGAIMHSRIARVVFGARDPKTGVAGSVIDLFAESRL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ + ++ FF RR Sbjct: 122 NHHATISGGVLAEECGGLLSSFFAARR 148 >gi|262172118|ref|ZP_06039796.1| tRNA-specific adenosine-34 deaminase [Vibrio mimicus MB-451] gi|261893194|gb|EEY39180.1| tRNA-specific adenosine-34 deaminase [Vibrio mimicus MB-451] Length = 170 Score = 216 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR Sbjct: 9 QDEQFMRRAIMLAAQAEEQGEVPVGAVLVRDGEIIAEGWNCSITHHDATAHAEIEVIRKA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++LS L + LYVTLEPC MCA A+ +R++R+ YGA + K G + Sbjct: 69 GKVLSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFNSQAS 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R +Q FF+ RR Sbjct: 129 YHYATVEKGLLEEECRAQLQAFFQRRR 155 >gi|184154758|ref|YP_001843098.1| cytosine/adenosine deaminase [Lactobacillus fermentum IFO 3956] gi|227514025|ref|ZP_03944074.1| nucleoside deaminase [Lactobacillus fermentum ATCC 14931] gi|260663213|ref|ZP_05864105.1| cytosine/adenosine deaminase [Lactobacillus fermentum 28-3-CHN] gi|183226102|dbj|BAG26618.1| cytosine/adenosine deaminase [Lactobacillus fermentum IFO 3956] gi|227087611|gb|EEI22923.1| nucleoside deaminase [Lactobacillus fermentum ATCC 14931] gi|260552405|gb|EEX25456.1| cytosine/adenosine deaminase [Lactobacillus fermentum 28-3-CHN] Length = 174 Score = 216 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 56/143 (39%), Positives = 85/143 (59%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A +EA AAL E+P+GAV V KII R N + +D T HAE+LAI C+ L Sbjct: 10 YMKEAFKEANQAALLGEVPIGAVVVYKGKIIGRGHNMREKFQDATYHAEVLAIMEACQAL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E DLYVTLEPC MC+ AI +RI+R+++ A + K G + + +H Sbjct: 70 GSWRLEECDLYVTLEPCIMCSGAIINSRIKRVFFAAPDEKAGAVSSLYHLLEDTRLNHQV 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E++ G+ ++ + Q++++FF+ R Sbjct: 130 EVHQGLMQEEASQMLKEFFRAIR 152 >gi|312862370|ref|ZP_07722613.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus vestibularis F0396] gi|311102013|gb|EFQ60213.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus vestibularis F0396] Length = 172 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 85/148 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FMS AL+EAQ + + EIP+G V V + +I+ R N EL HAE++AI+ Sbjct: 7 EEKEFFMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAEVMAIQE 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + L + L+VT+EPC MC+ AI LARI ++ YGA N K GG + Sbjct: 67 ANRTVGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDER 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ +I+QDFF++ R Sbjct: 127 LNHRVEVETGVMEEECAKIMQDFFRQSR 154 >gi|260776578|ref|ZP_05885473.1| tRNA-specific adenosine-34 deaminase [Vibrio coralliilyticus ATCC BAA-450] gi|260607801|gb|EEX34066.1| tRNA-specific adenosine-34 deaminase [Vibrio coralliilyticus ATCC BAA-450] Length = 169 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 54/147 (36%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+E A A E+PVGAV V +I++ N++ D TAHAE+ +R Sbjct: 9 QDEFFMRRAMELAAQAEAEGEVPVGAVLVKGGEIVAEGWNQSIGHHDATAHAEMQVLRKA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++L L + LYVTLEPC MCA A+ +R++R+ YGA + K G + Sbjct: 69 GQVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLNLFEHQAA 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I G+ E+ R +Q FFK RR Sbjct: 129 YHYADIEQGLMEEECRGQLQAFFKRRR 155 >gi|332528366|ref|ZP_08404366.1| CMP/dCMP deaminase [Hylemonella gracilis ATCC 19624] gi|332042237|gb|EGI78563.1| CMP/dCMP deaminase [Hylemonella gracilis ATCC 19624] Length = 375 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 6/147 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN------KIISRAGNRNRELKDVTAHA 54 M +M AL++A AA E+PVGAV V + ++++ A N D TAHA Sbjct: 1 MNTDLEYMRMALDQAYRAAQAGEVPVGAVLVHQDPHGGADRVLATAHNTPIADHDPTAHA 60 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E+ A+R +L L + LYVTLEPC MCA A+ AR++R+ YGA++PK G + Sbjct: 61 EMQALRAAGSVLGNYRLDDCTLYVTLEPCPMCAGAMLHARLKRVVYGAADPKTGAAGSVL 120 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQII 141 + +H ++ + + ++ Sbjct: 121 DLFAHRQLNHQTQVQGSVLAEECGALL 147 >gi|322374121|ref|ZP_08048655.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus sp. C150] gi|321277087|gb|EFX54158.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus sp. C150] Length = 172 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 87/148 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ + FMS AL+EAQ + + EIP+G V V + +I+ R N EL HAE++AI+ Sbjct: 7 EEKDFFMSEALKEAQKSLDKAEIPIGCVIVKDGEIVGRGHNAREELNQAIMHAEVMAIQE 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + L + L+VT+EPC MC+ AI LARI ++ YGASN K GG + Sbjct: 67 ANRTIGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGASNQKFGGAGSLYDILRDER 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E+ +I+Q+FF++ R Sbjct: 127 LNHRVDLETGVMEKECAEIMQNFFRQSR 154 >gi|260221448|emb|CBA30021.1| hypothetical protein Csp_A15070 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 408 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ FMS ALE+A A L E+PVGAV V ++I++ NR E D +AHAE++A++ Sbjct: 4 IQSDEYFMSLALEQAIEAELAGEVPVGAVIVKGGQVIAKGRNRTIEWNDPSAHAEVVALK 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R L + L+VTLEPC MC+ AI RI R+ +GA++PK G + + + Sbjct: 64 EAARACGTHRLSGLQLFVTLEPCAMCSGAIFHGRIERVVFGAADPKTGCAGSVLNLFAVD 123 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ I+ FF+ R Sbjct: 124 KLNHHAEVSGGVLSHECSDILVRFFERSR 152 >gi|261208197|ref|ZP_05922870.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium TC 6] gi|289566587|ref|ZP_06447008.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium D344SRF] gi|294615830|ref|ZP_06695673.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1636] gi|260077454|gb|EEW65172.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium TC 6] gi|289161632|gb|EFD09511.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium D344SRF] gi|291591320|gb|EFF22986.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1636] Length = 171 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 79/143 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL EA+ A + +E+P+GAV VL+ K++ R N +D T HAE+LAI+ Sbjct: 10 EKEKWMRLALAEAKKAEMLHEVPIGAVVVLDGKVVGRGYNLRETTQDATTHAEMLAIKEA 69 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C + L + L+VTLEPC MC+ A+ L+R+ +Y+GA +PKGG Sbjct: 70 CEKVGSWRLEDATLFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERF 129 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 +H + GI E I+ DFF Sbjct: 130 NHQAYVEGGILEDECGMILTDFF 152 >gi|319940016|ref|ZP_08014370.1| tRNA-specific adenosine deaminase [Streptococcus anginosus 1_2_62CV] gi|319810730|gb|EFW07057.1| tRNA-specific adenosine deaminase [Streptococcus anginosus 1_2_62CV] Length = 155 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 85/148 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL+EA+ A + +EIP+G V V N +II R N EL+ HAE++AI Sbjct: 6 EEKEFFMREALKEAEIALVNDEIPIGCVIVKNGEIIGRGHNAREELQRAVMHAEVMAIEK 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L + L+VT+EPC MC+ AI LARI ++ YGA NPK G + T Sbjct: 66 ANQHEHSWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIYGAKNPKFGAAGSLYDILTDER 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E Q++QDFF++RR Sbjct: 126 LNHRVELETGILEVECAQMMQDFFRKRR 153 >gi|269468375|gb|EEZ80040.1| cytosine/adenosine deaminase [uncultured SUP05 cluster bacterium] Length = 156 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 58/146 (39%), Positives = 82/146 (56%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ALE+A+ A +NE+PVGA+ V N+++I+ A N+ D TAHAEI +R+ Sbjct: 8 DEKWMKIALEQARFAQAKNEVPVGAILVKNDQLIASAHNQPISNNDPTAHAEIQLLRVAG 67 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L+ LP LYVTLEPCTMC A+ AR+ R+ +GA + K G + T + Sbjct: 68 KRLNNYRLPNTTLYVTLEPCTMCLGAMIHARVSRVVFGAYDKKTGVCGSCQDLVTSKCFN 127 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI E +I FFK RR Sbjct: 128 HQLQAQGGILESECSSLISQFFKNRR 153 >gi|257783881|ref|YP_003179098.1| CMP/dCMP deaminase zinc-binding [Atopobium parvulum DSM 20469] gi|257472388|gb|ACV50507.1| CMP/dCMP deaminase zinc-binding [Atopobium parvulum DSM 20469] Length = 166 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 53/146 (36%), Positives = 80/146 (54%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ALE+A+ AA E+P+GAV V ++++ A NR D +AHAE LA++ Sbjct: 16 DQKYMKLALEQAELAAQIGEVPIGAVVVCGGEVVAVAHNRREIDNDPSAHAEFLAMQKAS 75 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L + L +YVTLEPC MCA + ARI R +GA +PKGG + + + Sbjct: 76 KKLGRWRLSGCTVYVTLEPCLMCAGLMVNARIDRCVFGAFDPKGGATGTLFDVSSDSRLN 135 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ + + ++ FFKERR Sbjct: 136 HEFAVLGGVLAEEASAQLKAFFKERR 161 >gi|302672151|ref|YP_003832111.1| CMP/dCMP deaminase zinc-binding domain-containing protein [Butyrivibrio proteoclasticus B316] gi|302396624|gb|ADL35529.1| CMP/dCMP deaminase zinc-binding domain-containing protein [Butyrivibrio proteoclasticus B316] Length = 190 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 52/147 (35%), Positives = 75/147 (51%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+ +A+ A + E+P+G V V KII R NR K AHAEI AI+ Sbjct: 26 QDIKFMKAAITQARKAYVLGEVPIGCVIVYEGKIIGRGYNRRNTDKTTLAHAEITAIKRA 85 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +++ L LYVTLEPC MCA AI ARI + A NPK G + Sbjct: 86 GKVIGDWRLEGCKLYVTLEPCQMCAGAIVQARIPEVIMAAENPKAGCAGSVLDILNNPGF 145 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + +++++FF E R Sbjct: 146 NHQVQVKRGVLKDECAKMLKEFFVELR 172 >gi|322391142|ref|ZP_08064614.1| tRNA-specific adenosine deaminase [Streptococcus peroris ATCC 700780] gi|321145895|gb|EFX41284.1| tRNA-specific adenosine deaminase [Streptococcus peroris ATCC 700780] Length = 166 Score = 216 bits (552), Expect = 8e-55, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V + KII R N EL+ HAEI+AI Sbjct: 16 LEEKEAFMREALKEAEIALEHDEIPIGCVIVKDGKIIGRGHNAREELQRAVMHAEIMAIE 75 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 76 DANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDE 135 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E I+QDFF+ RR Sbjct: 136 RLNHRVDVETGVLESECAAIMQDFFRNRR 164 >gi|114330609|ref|YP_746831.1| CMP/dCMP deaminase, zinc-binding [Nitrosomonas eutropha C91] gi|114307623|gb|ABI58866.1| tRNA-adenosine deaminase [Nitrosomonas eutropha C91] Length = 167 Score = 216 bits (552), Expect = 8e-55, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 76/147 (51%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM AL+ A+ A E+PVGAV V N++I N L D TAHAEI+A+R Sbjct: 13 EDEYFMRQALDLARVAGDSGEVPVGAVVVRNSQIAGYGYNCPVTLMDPTAHAEIMALRDA 72 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L LPE LYVTLEPC MC ++ ARI+RL Y A +PK G + Sbjct: 73 ANKLGNYRLPECTLYVTLEPCVMCIGSMFHARIKRLVYAAEDPKTGVCGSLLDLPADTRL 132 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + +++ FF RR Sbjct: 133 NHHLVVSQGVLADEASTLLKQFFIIRR 159 >gi|306845521|ref|ZP_07478090.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp. BO1] gi|306273842|gb|EFM55669.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp. BO1] Length = 157 Score = 216 bits (552), Expect = 8e-55, Method: Composition-based stats. Identities = 93/142 (65%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A R E+P+GAV V + +II+RAGNR RE DVTAHAEIL IR +L Sbjct: 16 MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEVLG 75 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT TCHH+PE Sbjct: 76 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 135 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IYPG E +R+I++DFF+E+R Sbjct: 136 IYPGFCEADARKILRDFFREKR 157 >gi|290890962|ref|ZP_06554026.1| hypothetical protein AWRIB429_1416 [Oenococcus oeni AWRIB429] gi|290479361|gb|EFD88021.1| hypothetical protein AWRIB429_1416 [Oenococcus oeni AWRIB429] Length = 156 Score = 216 bits (551), Expect = 8e-55, Method: Composition-based stats. Identities = 58/145 (40%), Positives = 86/145 (59%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL++AQ A E+P+GAV V +N++I+ NR + TAHAE L I R Sbjct: 9 EEFMQLALKQAQTAFDEGEVPIGAVLVKDNQVIAADHNRKEQSGIATAHAEKLVIEGANR 68 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + L+VT+EPC MC AI +RI RL+YGA++PK GG+ + + +H Sbjct: 69 SLGDWRLNDCSLFVTIEPCVMCCGAIIQSRIPRLFYGAADPKFGGVSSLYHLLEDSRSNH 128 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+YP + ++S ++QDFF++ R Sbjct: 129 FVEVYPDVLAKQSANLMQDFFRKLR 153 >gi|332994184|gb|AEF04239.1| cytidine/deoxycytidylate deaminase family protein [Alteromonas sp. SN2] Length = 180 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 74/149 (49%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K +M AL A A E+PVGA V N ++I N D +AHAE+ A+R Sbjct: 11 MVKHTKWMQHALSLADKAEAMGEVPVGACVVHNGELIGEGWNTPITDSDPSAHAEMNAVR 70 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M + L + LYVTLEPC+MCA + ARI+R+ YGAS+ K G + Sbjct: 71 MAAKHLQNYRTTDATLYVTLEPCSMCAGMLVHARIKRVVYGASDAKTGAAGSEMNILNHP 130 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +H ++ G+ I FFK RR Sbjct: 131 SLNHQVDVISGVLADDCADKISAFFKRRR 159 >gi|293364574|ref|ZP_06611295.1| tRNA-specific adenosine deaminase [Streptococcus oralis ATCC 35037] gi|307702826|ref|ZP_07639774.1| tRNA-specific adenosine deaminase [Streptococcus oralis ATCC 35037] gi|291316832|gb|EFE57264.1| tRNA-specific adenosine deaminase [Streptococcus oralis ATCC 35037] gi|307623506|gb|EFO02495.1| tRNA-specific adenosine deaminase [Streptococcus oralis ATCC 35037] Length = 155 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 6 EEKEAFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIEN 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 66 ANVSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDER 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 126 LNHRVEVETGILEDDCAAIMQDFFRNRR 153 >gi|90962204|ref|YP_536120.1| cytosine/adenosine deaminase [Lactobacillus salivarius UCC118] gi|301300462|ref|ZP_07206662.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus salivarius ACS-116-V-Col5a] gi|90821398|gb|ABE00037.1| Cytosine/adenosine deaminase [Lactobacillus salivarius UCC118] gi|300851959|gb|EFK79643.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus salivarius ACS-116-V-Col5a] Length = 166 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 55/140 (39%), Positives = 76/140 (54%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL EA+ AA E+P+G V V + KII R N ++ T HAE+LAI Sbjct: 10 KFMKEALFEAKLAAKIGEVPIGCVIVKDGKIIGRGHNLREHSQNATLHAEMLAIEEANET 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 ++ L + L+VTLEPC MC+ AI +RI +YYGAS+PK G + + +H Sbjct: 70 VNSWRLVDTQLFVTLEPCPMCSGAIINSRIPEVYYGASDPKAGTVGTLMNLLEDSRFNHQ 129 Query: 126 PEIYPGISEQRSRQIIQDFF 145 + GI E I++DFF Sbjct: 130 SFVEKGILENECASILKDFF 149 >gi|217972561|ref|YP_002357312.1| zinc-binding CMP/dCMP deaminase [Shewanella baltica OS223] gi|217497696|gb|ACK45889.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS223] Length = 175 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 73/146 (50%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A+ A+NA E+PVGAV V + + I+ N + D +AHAEIL +R Sbjct: 13 DEHWMQVAMLMAENAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLREAG 72 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 73 RLVENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHPAFN 132 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ + FFK RR Sbjct: 133 HQVEVTSGVLADACSAQLSRFFKRRR 158 >gi|257871097|ref|ZP_05650750.1| cytidine/deoxycytidylate deaminase [Enterococcus gallinarum EG2] gi|257805261|gb|EEV34083.1| cytidine/deoxycytidylate deaminase [Enterococcus gallinarum EG2] Length = 173 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 85/148 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL+EAQ A E+P+GAV VL +II R N + ++ TAHAE+ AI+ Sbjct: 15 SEKEYFMREALKEAQKAEAIAEVPIGAVVVLEGQIIGRGHNLREKQQEATAHAEMFAIQQ 74 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C+ + L + L+VTLEPC MC+ A+ LAR+ +Y+GA +PKGG + Sbjct: 75 ACQAIESWRLEQAQLFVTLEPCPMCSGAMMLARVEEVYFGAYDPKGGAAGSLLNLLEDER 134 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E+ Q+++DFF+ R Sbjct: 135 FNHWSYVEGGILEEACGQVLKDFFRALR 162 >gi|170718532|ref|YP_001783741.1| CMP/dCMP deaminase zinc-binding [Haemophilus somnus 2336] gi|168826661|gb|ACA32032.1| CMP/dCMP deaminase zinc-binding [Haemophilus somnus 2336] Length = 166 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 78/147 (53%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 M AL A A EIPVGAV V I++ N + D TAHAEI+A+R Sbjct: 6 DEKMMRYALSLADKAEALGEIPVGAVLVDKQGDILAEGWNLSIIHNDPTAHAEIIALRQA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + LYVTLEPCTMCA AI +RI RL +GA + K G + + F+ Sbjct: 66 GQKLQNYRLLDTTLYVTLEPCTMCAGAILHSRIGRLVFGAYDYKTGAVGSRFHFFNDYKM 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ ++ Q I FF++RR Sbjct: 126 NHMLEITGGVLQEECSQKISTFFQKRR 152 >gi|327182903|gb|AEA31350.1| cytidine-deoxycytidylate deaminase [Lactobacillus amylovorus GRL 1118] Length = 168 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 84/149 (56%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+ +A+ A + E+P+GAV V + K+I NR KD T HAE++AI+ Sbjct: 5 DDKQKYMQLAIAQAKEAEKQGEVPIGAVIVDPDGKVIGTGYNRRELDKDATQHAEMIAIK 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + +T+ Sbjct: 65 EACKNLGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFTVE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P G+ + Q+++DFF+ R Sbjct: 125 KFNHHPHAIRGLYRDQCAQMLKDFFRAIR 153 >gi|29840517|ref|NP_829623.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila caviae GPIC] gi|29834866|gb|AAP05501.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila caviae GPIC] Length = 157 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 62/149 (41%), Positives = 88/149 (59%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM+ AL+EA+ A ++E+PVG V V +NKII+R N + +D TAHAEIL I Sbjct: 3 IEKDIFFMNQALKEARQAYDQDEVPVGCVIVKDNKIIARGHNTTEKFQDPTAHAEILCIG 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + LY TLEPC MCA AI LARIRR+ + A + + G + +T Sbjct: 63 AAAQYLENWRLVDTVLYCTLEPCLMCAGAIQLARIRRIVWAAPDLRLGAGGSWINVFTAK 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E + GI + S Q+++ FF E+R Sbjct: 123 HPFHQVECFSGICREESEQLMKQFFIEKR 151 >gi|261212078|ref|ZP_05926364.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. RC341] gi|260838686|gb|EEX65337.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. RC341] Length = 170 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 54/147 (36%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR Sbjct: 9 QDEQFMRRAITLAAQAEAQGEVPVGAVLVRDGEIIAEGWNCSITHHDATAHAEIEVIRKA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L+ L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ Sbjct: 69 GNVLNNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAA 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R +Q FF+ RR Sbjct: 129 YHYATVEKGLLEEECRTQLQAFFQRRR 155 >gi|251791894|ref|YP_003006614.1| tRNA-specific adenosine deaminase [Aggregatibacter aphrophilus NJ8700] gi|247533281|gb|ACS96527.1| tRNA-specific adenosine deaminase [Aggregatibacter aphrophilus NJ8700] Length = 174 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 61/147 (41%), Positives = 81/147 (55%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL A A EIPVGAV V +II N + D TAHAEI+A+R G Sbjct: 9 DEKFMRHALMLADKAEALGEIPVGAVLVSAEGEIIGEGWNLSIIDSDPTAHAEIVALRQG 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L LYVTLEPCTMCA AI +RI+RL +GA++ K G + + F+ Sbjct: 69 GQRLQNYRLLNATLYVTLEPCTMCAGAILHSRIKRLVFGAADYKTGAVGSRFHFFDDYKM 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ +Q + + FF++RR Sbjct: 129 NHVVEITGGVLQQECSEKLSAFFQKRR 155 >gi|262190740|ref|ZP_06048969.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae CT 5369-93] gi|262033384|gb|EEY51893.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae CT 5369-93] Length = 175 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR Sbjct: 9 QDEQFMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + LS L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ Sbjct: 69 GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAA 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R +Q FF+ RR Sbjct: 129 YHYATVEKGLLEEECRAQLQAFFQRRR 155 >gi|77361256|ref|YP_340831.1| tRNA-specific adenosine deaminase [Pseudoalteromonas haloplanktis TAC125] gi|76876167|emb|CAI87389.1| tRNA-specific adenosine deaminase [Pseudoalteromonas haloplanktis TAC125] Length = 168 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 85/147 (57%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 N +M AL A+ A +EIPVGA+ V +N++++ NR+ D +AHAE++A+R G Sbjct: 6 DDNYWMQQALTYAKQAEQLDEIPVGAILVKDNQLVAAGYNRSITDNDPSAHAEMMAVRKG 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L+ L + LYVTLEPC+MCA + +RI+RL +GA++ K G + Sbjct: 66 GKALNNYRLIDCTLYVTLEPCSMCAGLLVHSRIKRLVFGAADAKTGSAGSIMNLLQEPKL 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E + II FFK RR Sbjct: 126 NHQVEVLGGVLEGQCATIISGFFKRRR 152 >gi|295425582|ref|ZP_06818269.1| cytidine/deoxycytidylate deaminase [Lactobacillus amylolyticus DSM 11664] gi|295064598|gb|EFG55519.1| cytidine/deoxycytidylate deaminase [Lactobacillus amylolyticus DSM 11664] Length = 166 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 52/145 (35%), Positives = 87/145 (60%), Gaps = 1/145 (0%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A+ EA+ A ++E+P+GA+ V + +++ + NR +D T HAE++AIR C+ Sbjct: 9 KYMQLAIIEAKKAERQDEVPIGAIVVAPDGQVVGKGYNRRELDQDATQHAEMIAIREACK 68 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L + L+VTLEPC MCA AI ARI+ +Y+GA +PK G + +T+ +H Sbjct: 69 NIGFWRLIDCSLFVTLEPCPMCAGAIINARIKDVYFGAMDPKAGAAGSVVDLFTVEKFNH 128 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 P++ G+ + Q++ DFF+ R Sbjct: 129 HPQVIRGLYQDECSQMLTDFFRAIR 153 >gi|239630121|ref|ZP_04673152.1| tRNA-adenosine deaminase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067271|ref|YP_003789294.1| cytosine/adenosine deaminase [Lactobacillus casei str. Zhang] gi|239527733|gb|EEQ66734.1| tRNA-adenosine deaminase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439678|gb|ADK19444.1| Cytosine/adenosine deaminase [Lactobacillus casei str. Zhang] Length = 168 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 78/148 (52%), Gaps = 2/148 (1%) Query: 1 MKKG--NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + N FM AL EA+ AA E+P+GAV V +II R N +D T HAE+LA Sbjct: 1 MDEHDINQFMDAALTEAKKAAAIGEVPIGAVIVHQGEIIGRGYNLRETTQDATHHAEMLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I+ C+ L L + L+VTLEPC MCA A+ AR+ Y+GA++PK G Sbjct: 61 IQAACKTLGTWRLEDCSLFVTLEPCPMCAGAMINARVATCYFGATDPKAGVAGTFYNLLA 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146 +H + GI S ++Q FF+ Sbjct: 121 DTRFNHQVVVVSGIKADESATLLQTFFR 148 >gi|163844392|ref|YP_001622047.1| hypothetical protein BSUIS_B0208 [Brucella suis ATCC 23445] gi|163675115|gb|ABY39225.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 157 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 92/142 (64%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A R E+P+GA+ V + +II+RAGNR RE DVTAHAEIL IR +L Sbjct: 16 MDIALEEAHAAGERGEVPIGAIIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 75 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT TCHH+PE Sbjct: 76 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHTPE 135 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IYPG E +R+I++DFF+E+R Sbjct: 136 IYPGFCEADARKILKDFFREKR 157 >gi|258517370|ref|YP_003193592.1| CMP/dCMP deaminase zinc-binding [Desulfotomaculum acetoxidans DSM 771] gi|257781075|gb|ACV64969.1| CMP/dCMP deaminase zinc-binding [Desulfotomaculum acetoxidans DSM 771] Length = 160 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 62/146 (42%), Positives = 85/146 (58%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM ALEEA A L+ E+P+GAVAVL ++I R N L D TAHAE+LA+R Sbjct: 2 HTGFMRIALEEANKAYLKGEVPIGAVAVLGRQVIGRGHNLRESLNDSTAHAEMLALREAA 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R + L EV LY T+EPC MC+ A+ R++ L YGA + K G +++G A + Sbjct: 62 RFIGDWRLNEVILYSTIEPCAMCSGALVQFRVKLLVYGAPDVKFGAVDSGLDIVRQARFN 121 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ R+I+Q FF+E R Sbjct: 122 HRVEVVSGVLADECREIMQRFFRELR 147 >gi|322388496|ref|ZP_08062098.1| tRNA-specific adenosine deaminase [Streptococcus infantis ATCC 700779] gi|321140614|gb|EFX36117.1| tRNA-specific adenosine deaminase [Streptococcus infantis ATCC 700779] Length = 166 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A +EIP+G V V + K+I R N EL+ HAEI+AI Sbjct: 16 LEEKEAFMREALKEAEIALEHDEIPIGCVIVKDGKVIGRGHNAREELQRAVMHAEIMAIE 75 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 76 NANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVIYGAKNQKFGAAGSLYDILTDE 135 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E +I+QDFF+ RR Sbjct: 136 RLNHRVDVETGVLENECAEIMQDFFRNRR 164 >gi|301169624|emb|CBW29225.1| tRNA-specific adenosine deaminase [Haemophilus influenzae 10810] Length = 173 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 62/147 (42%), Positives = 81/147 (55%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62 M ALE A A EIPVGAV V + II N + D TAHAEI+A+R G Sbjct: 11 DEKMMRYALELADKAEALGEIPVGAVLVDDAGNIIGEGWNLSIVQSDPTAHAEIIALRNG 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L LYVTLEPCTMCA AI +RI+RL +GAS+ K G I + F+ Sbjct: 71 AKNIQNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKM 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ EI G+ + Q + FF++RR Sbjct: 131 NHTLEITSGVLAEECSQKLSTFFQKRR 157 >gi|304410027|ref|ZP_07391646.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS183] gi|307302260|ref|ZP_07582018.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica BA175] gi|304351436|gb|EFM15835.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS183] gi|306914298|gb|EFN44719.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica BA175] Length = 175 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 52/146 (35%), Positives = 73/146 (50%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A+ A+NA E+PVGAV V + + I+ N + D +AHAEIL +R Sbjct: 13 DEHWMQVAMLMAENAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLREAG 72 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R++ L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 73 RLVENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHPAFN 132 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI + FFK RR Sbjct: 133 HQVEVTSGILADACSAQLSRFFKRRR 158 >gi|15888031|ref|NP_353712.1| cytidine and deoxycytidylate deaminase [Agrobacterium tumefaciens str. C58] gi|15155649|gb|AAK86497.1| cytidine and deoxycytidylate deaminase [Agrobacterium tumefaciens str. C58] Length = 152 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 89/149 (59%), Positives = 116/149 (77%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM AL EA++A R+E+P+GAV VL+ ++I+R+GNR REL DVTAHAEI IR Sbjct: 1 MAERTHFMELALVEARSAGERDEVPIGAVLVLDGRVIARSGNRTRELNDVTAHAEIAVIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M C L QE LP DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG +E+G +F++ Sbjct: 61 MACEALGQERLPGADLYVTLEPCTMCAAAISFARIRRLYYGAQDPKGGAVESGVRFFSQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCHH+P++Y G++E S +I++ FF+E+R Sbjct: 121 TCHHAPDVYSGLAESESAEILRQFFREKR 149 >gi|224101625|ref|XP_002312358.1| predicted protein [Populus trichocarpa] gi|222852178|gb|EEE89725.1| predicted protein [Populus trichocarpa] Length = 1364 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 64/165 (38%), Positives = 82/165 (49%), Gaps = 17/165 (10%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +FM AL EA+ AA E+PVGAV V + +II+R N EL+D TAHAE++ IR Sbjct: 1161 KTDEMFMREALLEAKKAADSWEVPVGAVLVHHGRIIARGHNLVEELRDSTAHAEMICIRE 1220 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L E LY+TLEPC MCA AI ARI+ L +GA N G + + + A Sbjct: 1221 ASNKLRTWRLSETTLYITLEPCPMCAGAILQARIKTLVWGAPNKLLGADGSWIRLFPDAG 1280 Query: 122 -----------------CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H I GI E ++Q FF+ RR Sbjct: 1281 EENGSELSNKPAAPVHPFHRKMTIRRGILESECADVMQQFFQLRR 1325 >gi|238926792|ref|ZP_04658552.1| deaminase [Selenomonas flueggei ATCC 43531] gi|238885324|gb|EEQ48962.1| deaminase [Selenomonas flueggei ATCC 43531] Length = 152 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59 M M ALEEA+ A L E+P+GAV + + +IS N D TAHAE++AI Sbjct: 1 MPDDLHGMRLALEEAKRAYLCGEVPIGAVILDDAGSVISSGYNLRETEHDATAHAELIAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R C+ L + L + LYVT+EPC MCA AI ++RI R+ YG+++ K G E+ Sbjct: 61 RRACKALGRWRLTGLTLYVTIEPCPMCAGAIVMSRISRVVYGSADSKAGACESLFNITGC 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +H P++ G+ + ++++FF+ERR Sbjct: 121 SGLNHQPDVCAGVLAEECAALLRNFFQERR 150 >gi|227513704|ref|ZP_03943753.1| possible guanine deaminase [Lactobacillus buchneri ATCC 11577] gi|227522506|ref|ZP_03952555.1| possible guanine deaminase [Lactobacillus hilgardii ATCC 8290] gi|227083023|gb|EEI18335.1| possible guanine deaminase [Lactobacillus buchneri ATCC 11577] gi|227090328|gb|EEI25640.1| possible guanine deaminase [Lactobacillus hilgardii ATCC 8290] Length = 157 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 58/144 (40%), Positives = 83/144 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM AL EAQ A L E+P+GAV + +II R N L D AHAEI+AI Sbjct: 4 NKDERFMKMALIEAQKAYLIGEVPIGAVITQDGQIIGRGHNLREHLNDGVAHAEIMAIEE 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 CR L L + +LYVT+EPC MC+ AI +RI R+ +GA + K G + + + + Sbjct: 64 ACRYLRSWRLVDCELYVTIEPCLMCSGAIVNSRIDRVVFGARDKKAGAVRSLYRVLEDSR 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 +H+ E++ G+ + +II+DFF Sbjct: 124 LNHNVEVFEGVLQPACSKIIKDFF 147 >gi|116495716|ref|YP_807450.1| cytosine/adenosine deaminase [Lactobacillus casei ATCC 334] gi|116105866|gb|ABJ71008.1| tRNA-adenosine deaminase [Lactobacillus casei ATCC 334] Length = 168 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 78/148 (52%), Gaps = 2/148 (1%) Query: 1 MKKG--NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + N FM AL EA+ AA E+P+GAV V +II R N +D T HAE+LA Sbjct: 1 MDEHDINQFMDAALTEAKKAAAIGEVPIGAVIVHQGEIIGRGYNLRETTQDATYHAEMLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I+ C+ L L + L+VTLEPC MCA A+ AR+ Y+GA++PK G Sbjct: 61 IQAACKTLGTWRLEDCSLFVTLEPCPMCAGAMINARVATCYFGATDPKAGVAGTFYNLLA 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146 +H + GI S ++Q FF+ Sbjct: 121 DTRFNHQVAVVSGIKADESATLLQTFFR 148 >gi|225867781|ref|YP_002743729.1| deaminase [Streptococcus equi subsp. zooepidemicus] gi|225701057|emb|CAW97859.1| putative deaminase [Streptococcus equi subsp. zooepidemicus] Length = 164 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL+EA+ + L++EIP+G V V II R N E HAEI+AI Sbjct: 6 QEQEYFMREALKEAEKSLLKDEIPIGCVIVKAGHIIGRGHNAREERNQAIMHAEIMAINE 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L+VT+EPC MC+ AI LARI + YGASN K GG + Q T Sbjct: 66 ANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGASNQKFGGAGSLYQILTDKR 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ +++Q FF++RR Sbjct: 126 LNHRVQLEVGLLADDCAKLMQTFFRQRR 153 >gi|119468555|ref|ZP_01611646.1| tRNA-specific adenosine deaminase [Alteromonadales bacterium TW-7] gi|119448063|gb|EAW29328.1| tRNA-specific adenosine deaminase [Alteromonadales bacterium TW-7] Length = 165 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 81/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A NEIPVGAV V +N++I+ NR+ D +AHAE++A+R Sbjct: 6 DNAYWMEQALLYAKQAEQLNEIPVGAVLVKDNQLIASGYNRSITDNDPSAHAEMIAVREA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L+ L + LYVTLEPC+MCA + +RI+RL +GA + K G + Sbjct: 66 GKALNNYRLIDCTLYVTLEPCSMCAGLLVHSRIKRLVFGAPDAKTGSAGSIMNLLQEPRL 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + I +FFK RR Sbjct: 126 NHQVEVVGGVLADKCGNTISEFFKRRR 152 >gi|257464722|ref|ZP_05629093.1| tRNA-adenosine deaminase [Actinobacillus minor 202] gi|257450382|gb|EEV24425.1| tRNA-adenosine deaminase [Actinobacillus minor 202] Length = 150 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 64/143 (44%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A EIPVGAV V + KI+ NR+ L D TAHAEI AIRM + L Sbjct: 1 MQYALSLADKAEQEGEIPVGAVLVDKSGKIVGEGWNRSIILSDPTAHAEIQAIRMAGQHL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI +RI RL +GAS+ K G I + + +H Sbjct: 61 QNYRLLDTTLYVTLEPCPMCAGAILHSRIGRLVFGASDYKTGAIGSRFHLFEDYKMNHFL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ Q I FFK+RR Sbjct: 121 QIRGGVMRDECSQKISAFFKKRR 143 >gi|315612142|ref|ZP_07887058.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis ATCC 49296] gi|315315805|gb|EFU63841.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis ATCC 49296] Length = 155 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 6 EEKEAFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIEN 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L+VT+EPC MC+ AI LARI ++ YGA N K G + T Sbjct: 66 ANVSEESWRLLNCTLFVTIEPCVMCSGAIGLARIPKVVYGAKNQKFGAAGSLYDILTDER 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 126 LNHRVEVETGILEDDCVAIMQDFFRNRR 153 >gi|309782085|ref|ZP_07676815.1| tRNA-specific adenosine deaminase [Ralstonia sp. 5_7_47FAA] gi|308919151|gb|EFP64818.1| tRNA-specific adenosine deaminase [Ralstonia sp. 5_7_47FAA] Length = 182 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL +A+ A + E+PVGAV V N+I+ N D +AHAE+ A+R Sbjct: 17 ERDGYWMQQALVQAKFAWGQGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LP+ +++VTLEPC MCA A+ AR+ R+ YGA +PK G + + Sbjct: 77 AAEKLGNYRLPDCEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSILDLFAETR 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I + Q +++ FF ERR Sbjct: 137 LNHQTAITGSVLAQECGDMLRAFFAERR 164 >gi|253702219|ref|YP_003023408.1| CMP/dCMP deaminase zinc-binding [Geobacter sp. M21] gi|251777069|gb|ACT19650.1| CMP/dCMP deaminase zinc-binding protein [Geobacter sp. M21] Length = 166 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K + +M A+ +A+ A E+P+GAV V + +I+R N +D AHAE++AIR Sbjct: 3 KDDHYWMGQAIAQARRAEAIGEVPIGAVVVKDGVVIARGHNLRESKQDPAAHAEMIAIRK 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L+ L LYVTLEPCTMC A+ L+R+ R+ +G+ +PKGG + Sbjct: 63 AAKKLASWRLTGATLYVTLEPCTMCMGAVILSRLERVVFGSYDPKGGAAGSLYDLSDDKR 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +HS + PG+ + + ++ FF R Sbjct: 123 LNHSVILTPGVRGEETSSMLSGFFAGLR 150 >gi|191639204|ref|YP_001988370.1| Putative Cytidine/deoxycytidylate deaminase, zinc-binding region YaaJ [Lactobacillus casei BL23] gi|227533725|ref|ZP_03963774.1| zinc-binding cytidine/deoxycytidylate deaminase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|190713506|emb|CAQ67512.1| Putative Cytidine/deoxycytidylate deaminase, zinc-binding region YaaJ [Lactobacillus casei BL23] gi|227188709|gb|EEI68776.1| zinc-binding cytidine/deoxycytidylate deaminase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|327383282|gb|AEA54758.1| Nucleoside deaminase [Lactobacillus casei LC2W] gi|327386465|gb|AEA57939.1| Nucleoside deaminase [Lactobacillus casei BD-II] Length = 168 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 78/148 (52%), Gaps = 2/148 (1%) Query: 1 MKKG--NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + N FM AL EA+ AA E+P+GAV V +II R N +D T HAE+LA Sbjct: 1 MDEHDINQFMDAALTEAKKAAAIGEVPIGAVIVHQGEIIGRGYNLRETTQDATHHAEMLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I+ C+ L L + L+VTLEPC MCA A+ AR+ Y+GA++PK G Sbjct: 61 IQAACKTLGTWRLEDCSLFVTLEPCPMCAGAMINARVATCYFGATDPKAGVAGTFYNLLA 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146 +H + GI S ++Q FF+ Sbjct: 121 DTRFNHQVAVVSGIKADESATLLQTFFR 148 >gi|195977341|ref|YP_002122585.1| tRNA-specific adenosine-34 deaminase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974046|gb|ACG61572.1| tRNA-specific adenosine-34 deaminase [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 164 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL+EA+ + L++EIP+G V V II R N E HAEI+AI Sbjct: 6 QEQEYFMREALKEAKKSLLKDEIPIGCVIVKAGHIIGRGHNAREERNQAIMHAEIMAISE 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L+VT+EPC MC+ AI LARI + YGASN K GG + Q T Sbjct: 66 ANVHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGASNQKFGGAGSLYQILTDER 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ +++Q FF+++R Sbjct: 126 LNHRVQLETGLLADDCAKLMQTFFQQKR 153 >gi|23499966|ref|NP_699406.1| cytidine and deoxycytidylate deaminase family protein [Brucella suis 1330] gi|23463547|gb|AAN33411.1| cytidine and deoxycytidylate deaminase family protein [Brucella suis 1330] Length = 157 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 93/142 (65%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A R E+P+GAV V + +II+RAGNR RE DVTAHAEIL IR +L Sbjct: 16 MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILIIRQAGEMLG 75 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT TCHH+PE Sbjct: 76 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 135 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IYPG E +R+I++DFF+E+R Sbjct: 136 IYPGFCEADARKILKDFFREKR 157 >gi|322376101|ref|ZP_08050611.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus sp. C300] gi|321279051|gb|EFX56094.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus sp. C300] Length = 155 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 6 EEKEAFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIEN 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 66 ANVSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDER 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 126 LNHRVEVEAGILEDDCAAIMQDFFRNRR 153 >gi|34498926|ref|NP_903141.1| cytidine deaminase [Chromobacterium violaceum ATCC 12472] gi|34104775|gb|AAQ61132.1| probable cytidine deaminase [Chromobacterium violaceum ATCC 12472] Length = 244 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 52/143 (36%), Positives = 77/143 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A + AQ AA E+PVGA+ V + +II R N+ D +AHAE+ A+R L Sbjct: 96 YMRQARDLAQQAAAEGEVPVGALVVKDGEIIGRGYNQPIGRHDPSAHAEMQALRDAAARL 155 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L DLYVTLEPC MC+ AI AR+ R+ YGA++ K G + + +H Sbjct: 156 RNYRLDGCDLYVTLEPCPMCSGAILHARVARVIYGAADAKTGAAGSTVDLFADPRLNHHA 215 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + + FF++RR Sbjct: 216 AVFGGVEAEACAAQLSAFFRQRR 238 >gi|237653174|ref|YP_002889488.1| CMP/dCMP deaminase zinc-binding [Thauera sp. MZ1T] gi|237624421|gb|ACR01111.1| CMP/dCMP deaminase zinc-binding [Thauera sp. MZ1T] Length = 154 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M ALE+A+ A +E+PVGAV V +I+ R N+ D TAHAEI+A+R Sbjct: 2 NDEDYMRAALEQARAAGAADEVPVGAVVVCGGEIVGRGFNQPIGRHDPTAHAEIMALRDA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L LP +LYVTLEPC MC+ AI ARI R+ +GA +PK G + + Sbjct: 62 AAHLGNYRLPGCELYVTLEPCAMCSGAIMHARIARVVFGARDPKTGVAGSVLDLFAEPRL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ +++ FF RR Sbjct: 122 NHHATIEGGLLADECGRMLSSFFAARR 148 >gi|182682990|ref|YP_001834737.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae CGSP14] gi|303255537|ref|ZP_07341594.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS455] gi|303260656|ref|ZP_07346619.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP-BS293] gi|303260820|ref|ZP_07346769.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP14-BS292] gi|303263147|ref|ZP_07349070.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS397] gi|303267493|ref|ZP_07353343.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS457] gi|303269460|ref|ZP_07355227.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS458] gi|182628324|gb|ACB89272.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae CGSP14] gi|301800992|emb|CBW33654.1| putative deaminase [Streptococcus pneumoniae INV200] gi|302597498|gb|EFL64587.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS455] gi|302637657|gb|EFL68143.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP14-BS292] gi|302638186|gb|EFL68658.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP-BS293] gi|302640994|gb|EFL71374.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS458] gi|302642968|gb|EFL73265.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS457] gi|302646920|gb|EFL77144.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS397] Length = 155 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 65 DANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E + I+QDFF+ RR Sbjct: 125 RLNHRVEVEIGILEDKCAAIMQDFFRNRR 153 >gi|220930799|ref|YP_002507708.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulolyticum H10] gi|220001127|gb|ACL77728.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulolyticum H10] Length = 152 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM A+++A+ A E PVGAV V N +II+ NR E DVT+HAEI A++ Sbjct: 3 TKNEQFMLAAIQQAKEAYKNGESPVGAVIVKNGEIIAYGCNRREEKLDVTSHAEIEALKK 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + L D+YVTLEPC MCA AI +RI+ LY GA + K G + + + Sbjct: 63 AAKEIGTWKLDGCDMYVTLEPCPMCAGAIIQSRIKTLYIGAMDKKSGSAGSVVDLFRVPQ 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + I+ +FFK+ R Sbjct: 123 FNHRVDVVYGLMFEECGTILTEFFKQLR 150 >gi|308275014|emb|CBX31613.1| tRNA-specific adenosine deaminase [uncultured Desulfobacterium sp.] Length = 156 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 59/150 (39%), Positives = 88/150 (58%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59 M + +M A++EA+ A E+P+GA+ V +++S A N L D AHAEILA+ Sbjct: 5 MNEHEAYMELAIKEAKKAGQNCEVPIGAILVDEKGQVVSLAHNSTITLCDPCAHAEILAL 64 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R C I+ L + +YVT+EPC MC AI AR+++L +GA +PK G + F Sbjct: 65 RNACSIVGNYRLLNMTIYVTIEPCIMCMGAIIHARLKKLVFGAYDPKWGAAGSLYNFAND 124 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI PGI E+ + ++QDFFK++R Sbjct: 125 NRLNHKTEIIPGICEKECKDLMQDFFKKKR 154 >gi|293570161|ref|ZP_06681239.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1071] gi|291587310|gb|EFF19196.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1071] Length = 171 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 54/143 (37%), Positives = 79/143 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL EA+ A + +E+P+GAV VL+ K+I R N +D T HAE+LAI+ Sbjct: 10 EKEKWMRLALAEAKKAEMLHEVPIGAVVVLDGKVIGRGYNLRETTQDATTHAEMLAIKEA 69 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C + L + L+VTLEPC MC+ A+ L+R+ +Y+GA +PKGG Sbjct: 70 CEKVGSWRLEDAALFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERF 129 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 +H + GI E I+ DFF Sbjct: 130 NHQAYVEGGILEDECGMILTDFF 152 >gi|149190045|ref|ZP_01868322.1| cytosine/adenosine deaminase [Vibrio shilonii AK1] gi|148836075|gb|EDL53035.1| cytosine/adenosine deaminase [Vibrio shilonii AK1] Length = 178 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A+E A +A E+PVGAV V KII+ N++ D TAHAE+ IR Sbjct: 12 DEDRRFMQRAMELANHAESEGEVPVGAVLVRGGKIIAEGWNQSIGNHDATAHAEMQVIRK 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 72 AGQNLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQA 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E+ R +Q FFK RR Sbjct: 132 SYHYADVESGLLEEECRHQLQAFFKRRR 159 >gi|299820898|ref|ZP_07052787.1| tRNA-specific adenosine deaminase [Listeria grayi DSM 20601] gi|299817919|gb|EFI85154.1| tRNA-specific adenosine deaminase [Listeria grayi DSM 20601] Length = 173 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 55/146 (37%), Positives = 86/146 (58%), Gaps = 1/146 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+K +FM A++EA+ A E+P+GAV VL+N+II R N ++ HAEILAI+ Sbjct: 14 MEKA-IFMEEAIKEARKAQALGEVPIGAVVVLDNEIIGRGHNLRETTQNAITHAEILAIQ 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L E ++YVTLEPC MC+ AI L+R++++YYGA +PK G Sbjct: 73 AACQNRESWRLSEAEIYVTLEPCPMCSGAILLSRLKKVYYGAPDPKAGTAGTLMNLLQDD 132 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 +H+ E+ G+ + +++ FF+ Sbjct: 133 RFNHTCEVEAGLLQTECAELLTSFFR 158 >gi|302037080|ref|YP_003797402.1| tRNA-specific adenosine deaminase [Candidatus Nitrospira defluvii] gi|300605144|emb|CBK41477.1| tRNA-specific adenosine deaminase [Candidatus Nitrospira defluvii] Length = 162 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 55/146 (37%), Positives = 81/146 (55%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL A++A L E+P+ A+ V +I++A N +D TAHAE++ I+ Sbjct: 8 DTRFMQQALTLARSAPLIGEVPIAALLVHEGIVIAQAHNLRETRQDPTAHAEVIVIQDAA 67 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R + L LYVTLEPCTMC AI LARI RL + A++PK G + + Sbjct: 68 RHMGSWRLINTTLYVTLEPCTMCIGAIVLARIPRLVFAATDPKAGACGSIMNIPPEPRLN 127 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ + S+ ++QDFF++ R Sbjct: 128 HRVEVVGGVCAEESQALLQDFFQQLR 153 >gi|261820536|ref|YP_003258642.1| tRNA-specific adenosine deaminase [Pectobacterium wasabiae WPP163] gi|261604549|gb|ACX87035.1| CMP/dCMP deaminase zinc-binding protein [Pectobacterium wasabiae WPP163] Length = 168 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 61/147 (41%), Positives = 74/147 (50%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL AQ A E+PVGAV VL+NK I NR D TAHAEI+A+R G Sbjct: 6 NDEYWMRYALALAQRAQDEGEVPVGAVLVLDNKAIGEGWNRPIGHHDPTAHAEIMALRQG 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L E LYVTLEPC MCA A+ RI RL YGAS+ K G + Sbjct: 66 GAVLQNYRLLETTLYVTLEPCIMCAGAMIHGRIGRLVYGASDEKTGAAGSLLDILRHPGM 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ + FF+ RR Sbjct: 126 NHQIVIESGVLAGECSATLSAFFRLRR 152 >gi|315180919|gb|ADT87833.1| zinc-binding domain protein [Vibrio furnissii NCTC 11218] Length = 189 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+ A+ A E+PVGAV V + II+ NR+ D TAHAEI +R Sbjct: 11 EDEQFMRRAMALAEQAEAEGEVPVGAVLVKDGHIIAEGWNRSIGACDATAHAEIQVLRQA 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L E LYVTLEPC MCA A+ +R++R+ YGA + K G ++ Sbjct: 71 GEALHNYRLLETTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAA 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E RQ +Q FF+ RR Sbjct: 131 YHYATVEKGLLEDECRQQLQAFFQRRR 157 >gi|312864368|ref|ZP_07724601.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus downei F0415] gi|311100089|gb|EFQ58300.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus downei F0415] Length = 157 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL+EAQ + + EIP+G V V + +II R N EL HAEI+AI Sbjct: 7 DQKKAFMQEALKEAQKSLAKEEIPIGCVIVKDGQIIGRGHNAREELNQAIMHAEIMAINQ 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L + L+VT+EPC MC+ AI LARI ++ YGA N K G + T Sbjct: 67 ANQTEGNWRLLDSALFVTIEPCVMCSGAIGLARIPQVIYGAPNQKFGAAGSLYDILTDQR 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ GI E +I+QDFF+ RR Sbjct: 127 LNHHVQVETGILEADCAKIMQDFFRNRR 154 >gi|319775162|ref|YP_004137650.1| tRNA-specific adenosine deaminase [Haemophilus influenzae F3047] gi|329122920|ref|ZP_08251491.1| tRNA-specific adenosine deaminase [Haemophilus aegyptius ATCC 11116] gi|317449753|emb|CBY85960.1| tRNA-specific adenosine deaminase [Haemophilus influenzae F3047] gi|327471851|gb|EGF17291.1| tRNA-specific adenosine deaminase [Haemophilus aegyptius ATCC 11116] Length = 173 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 63/147 (42%), Positives = 81/147 (55%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62 M ALE A A EIPVGAV V + II N + D TAHAEI+A+R G Sbjct: 11 DEKMMRYALELADKAEALGEIPVGAVLVDDAGNIIGEGWNLSIVQSDPTAHAEIIALRNG 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L LYVTLEPCTMCA AI +RIRRL +GAS+ K G I + F+ Sbjct: 71 AKNIQNYRLLNSTLYVTLEPCTMCAGAILHSRIRRLVFGASDYKTGAIGSRFHFFDDYKM 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ EI G+ + Q + FF++RR Sbjct: 131 NHTLEITSGVLAEECSQKLSTFFQKRR 157 >gi|94501251|ref|ZP_01307773.1| cytidine/deoxycytidylate deaminase family protein [Oceanobacter sp. RED65] gi|94426678|gb|EAT11664.1| cytidine/deoxycytidylate deaminase family protein [Oceanobacter sp. RED65] Length = 164 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 64/147 (43%), Positives = 90/147 (61%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM+ A+++A+ A NE+PVGAV VL+ ++I N+ D TAHAE++A+R Sbjct: 6 QDEHFMALAIQQAKKADALNEVPVGAVVVLDGEVIGEGYNQPISGCDPTAHAEVMALRQA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + +S L DLYVT+EPCTMCA AI +RIRRL YGA+ PK G IE+ T + Sbjct: 66 AKNVSNYRLVNADLYVTIEPCTMCAGAIVHSRIRRLVYGATEPKAGVIESQQTILTQSYF 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI + I+Q FF+ RR Sbjct: 126 NHRVEVVSGILLDQCTDIVQAFFRRRR 152 >gi|91792629|ref|YP_562280.1| CMP/dCMP deaminase, zinc-binding [Shewanella denitrificans OS217] gi|91714631|gb|ABE54557.1| CMP/dCMP deaminase, zinc-binding [Shewanella denitrificans OS217] Length = 177 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 52/147 (35%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K +M A+ A+ A + E+PVGAV V +N++++ N + D +AHAE+ IR Sbjct: 20 KDEHWMRVAMSMAEEAEAKGEVPVGAVLVKDNQLLATGFNLSISEHDCSAHAEMACIRAA 79 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ L + LYVTLEPC MCA A+ ARI RL +GA++ K G + Sbjct: 80 GTLIENYRLLDTTLYVTLEPCPMCAGAMVHARIARLVFGATDLKTGAAGSVMNLLQHPGL 139 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + + FFK RR Sbjct: 140 NHQLEITSGVLAEPCAAQLSAFFKRRR 166 >gi|114565589|ref|YP_752743.1| hypothetical protein Swol_0013 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336524|gb|ABI67372.1| tRNA-adenosine deaminase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 151 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM ALEEA+ A R EIPVGA+ V N KII+RA N +D TAHAE+LA++ Sbjct: 2 QHEDFMRHALEEAREAYKRGEIPVGAIVVHNGKIIARAHNEKESYQDATAHAEMLALQRA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L L E LY TLEPC MCA A+ R+ L YG ++PK G + Sbjct: 62 ARHLGHWRLNESVLYCTLEPCVMCAGAMVNVRLGHLVYGVTDPKAGSAGSIYDIVRSPAL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ ++++ FF R Sbjct: 122 NHQVVVEGGVLKEECSELLKRFFASLR 148 >gi|187928419|ref|YP_001898906.1| CMP/dCMP deaminase zinc-binding [Ralstonia pickettii 12J] gi|187725309|gb|ACD26474.1| CMP/dCMP deaminase zinc-binding [Ralstonia pickettii 12J] Length = 182 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL +A+ A + E+PVGAV V N+I+ N D +AHAE+ A+R Sbjct: 17 ERDGYWMQQALVQAKFAWGQGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LP+ +++VTLEPC MCA A+ AR+ R+ YGA +PK G + + Sbjct: 77 AAEKLGNYRLPDCEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSILDLFAETR 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I + Q +++ FF ERR Sbjct: 137 LNHQTAITGSVLAQECGDMLRAFFAERR 164 >gi|241662996|ref|YP_002981356.1| CMP/dCMP deaminase zinc-binding [Ralstonia pickettii 12D] gi|240865023|gb|ACS62684.1| CMP/dCMP deaminase zinc-binding [Ralstonia pickettii 12D] Length = 182 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL +A+ A + E+PVGAV V N+I+ N D +AHAE+ A+R Sbjct: 17 ERDGYWMQQALVQAKFAWGQGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LP+ +++VTLEPC MCA A+ AR+ R+ YGA +PK G + + Sbjct: 77 AAEKLGNYRLPDCEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSILDLFAETR 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I + Q +++ FF ERR Sbjct: 137 LNHQTAITGSVLAQECGDMLRAFFAERR 164 >gi|225869728|ref|YP_002745675.1| deaminase [Streptococcus equi subsp. equi 4047] gi|225699132|emb|CAW92326.1| putative deaminase [Streptococcus equi subsp. equi 4047] Length = 164 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL+EA+ + L++EIP+G V V II R N E HAEI+AI Sbjct: 6 QEQEYFMREALKEAEKSLLKDEIPIGCVIVKAGHIIGRGHNAREERNQAIMHAEIMAINE 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L+VT+EPC MC+ AI LARI + YGASN K GG + Q T Sbjct: 66 ANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGASNQKFGGAGSLYQILTDER 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ +++Q FF++RR Sbjct: 126 LNHRVQLEVGLLADDCAKLMQTFFRQRR 153 >gi|237808810|ref|YP_002893250.1| CMP/dCMP deaminase zinc-binding [Tolumonas auensis DSM 9187] gi|237501071|gb|ACQ93664.1| CMP/dCMP deaminase zinc-binding [Tolumonas auensis DSM 9187] Length = 164 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A++ A+ A E+PVGAV VLNN++I N + D AHAEI+AIR Sbjct: 5 EQDIHWMQYAMQLARRAEEAGEVPVGAVLVLNNEVIGEGWNLSICRHDPCAHAEIMAIRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + L LYVTLEPC MCA A+ +RI RL YGAS+ K G + T Sbjct: 65 AGQNIGNYRLLGATLYVTLEPCIMCAGAMIHSRIERLVYGASDLKTGAAGSVFDVLTDPR 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI + Q + +FF+ RR Sbjct: 125 HNHIVSVIGGIEAEACSQQLSNFFRRRR 152 >gi|255744661|ref|ZP_05418612.1| tRNA-specific adenosine-34 deaminase [Vibrio cholera CIRS 101] gi|262161205|ref|ZP_06030316.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae INDRE 91/1] gi|262168710|ref|ZP_06036405.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae RC27] gi|255737692|gb|EET93086.1| tRNA-specific adenosine-34 deaminase [Vibrio cholera CIRS 101] gi|262022828|gb|EEY41534.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae RC27] gi|262028955|gb|EEY47608.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae INDRE 91/1] Length = 175 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR Sbjct: 9 QDEQFMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + LS L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ Sbjct: 69 GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAA 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R +Q FF+ RR Sbjct: 129 YHYATVEKGLLEEECRAQLQAFFQRRR 155 >gi|212634313|ref|YP_002310838.1| cytidine/deoxycytidylate deaminase [Shewanella piezotolerans WP3] gi|212555797|gb|ACJ28251.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Shewanella piezotolerans WP3] Length = 186 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 52/144 (36%), Positives = 77/144 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + FM A+E A A + E+PVGAV V + +++S N + L D +AHAE+ IR Sbjct: 18 EDDSRFMKMAMEMAAKAEEKGEVPVGAVLVKDGEVVSAGFNYSIGLHDPSAHAEMQCIRQ 77 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 ++L L + LYVTLEPC MCA AI +RI RL YGA++ K G Sbjct: 78 AGQLLENYRLLDTTLYVTLEPCAMCAGAIVHSRISRLVYGANDEKTGAAGTVIDIVRHPA 137 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 +H E+ G+ ++ + + FF Sbjct: 138 FNHQVEVTAGVRDEACSEQLSAFF 161 >gi|304398612|ref|ZP_07380484.1| CMP/dCMP deaminase zinc-binding [Pantoea sp. aB] gi|304353823|gb|EFM18198.1| CMP/dCMP deaminase zinc-binding [Pantoea sp. aB] Length = 155 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 57/142 (40%), Positives = 81/142 (57%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ A ++E+PVGAV V N+++I NR D TAHAEI+A+R G ++L Sbjct: 1 MRHALGLARRAWEQSEVPVGAVLVQNDQVIGEGWNRPIGQHDPTAHAEIMALRQGGKVLE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +RI RL YGA + K G + +H E Sbjct: 61 NYRLLDTTLYVTLEPCVMCAGAMVHSRITRLVYGAHDVKSGAAGSLLDVLGHPGMNHQIE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 ++ G+ + ++ DFF+ RR Sbjct: 121 LHSGVLAEECAAMLSDFFRMRR 142 >gi|15601943|ref|NP_245015.1| hypothetical protein PM0078 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720287|gb|AAK02162.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 166 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 81/147 (55%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A A EIPVGAV V ++ N + D TAHAEI+A+R G Sbjct: 6 DEKWMRHALRLADKAEQLGEIPVGAVLVDEQGNLLGEGWNLSISESDPTAHAEIVALRQG 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L LYVTLEPCTMCA AI +RI+RL +GAS+ K G + + F+ Sbjct: 66 GQRLQNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAVGSRFHFFDDYKM 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ EI G+ ++ Q I FF++RR Sbjct: 126 NHAIEITAGVLQEECSQKISAFFQKRR 152 >gi|254473540|ref|ZP_05086936.1| cytosine deaminase [Pseudovibrio sp. JE062] gi|211957252|gb|EEA92456.1| cytosine deaminase [Pseudovibrio sp. JE062] Length = 148 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 78/146 (53%), Positives = 105/146 (71%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + FM AL EA+ A R E+P+G V V + K++S AGNR EL D TAHAE+LAIR Sbjct: 2 NSTFMDMALNEARAAEARGEVPIGCVVVKDGKVLSAAGNRTLELNDPTAHAEVLAIREAG 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L+ + L DLYVTLEPC MCAAAIS ARIRRLYYGA + KGGG+++G +FY+ TCH Sbjct: 62 KQLNSQRLEGCDLYVTLEPCPMCAAAISFARIRRLYYGAGDAKGGGVDHGVRFYSSPTCH 121 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H+P++Y G++E S +++ FF+ +R Sbjct: 122 HTPDVYSGLAETDSAAMLKTFFQGKR 147 >gi|256848137|ref|ZP_05553581.1| tRNA-adenosine deaminase [Lactobacillus coleohominis 101-4-CHN] gi|256715197|gb|EEU30174.1| tRNA-adenosine deaminase [Lactobacillus coleohominis 101-4-CHN] Length = 169 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 54/143 (37%), Positives = 80/143 (55%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+ EA A L E+P+GAV V + +II N + + HAEILAI C L Sbjct: 12 FMRAAINEAHQAELLGEVPIGAVIVKDGQIIGAGHNMREKYQQSIYHAEILAIMEACDAL 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + DLYVTLEPC MC+ AI +R+R++YY A +PK G + + + +H Sbjct: 72 HSWRLEDCDLYVTLEPCIMCSGAIIHSRLRQVYYAAPDPKAGAVNSLYTLLNDSRLNHQV 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + Q+++ FF+E R Sbjct: 132 TVHQGLLQDECSQMLKHFFREIR 154 >gi|282852744|ref|ZP_06262086.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus gasseri 224-1] gi|282556486|gb|EFB62106.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus gasseri 224-1] Length = 150 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 50/143 (34%), Positives = 85/143 (59%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A +A+ A + E+P+GA+ V + +I NR +D T HAE++AIR C+ L Sbjct: 1 MQLAFAQAKKAEDQGEVPIGAIVVDKDGNVIGEGYNRRELDEDATQHAEMIAIRQACQNL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L++TLEPC MC+ AI +R+ +YYGA +PK G + + + +H P Sbjct: 61 GSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAAGSVIDLFKVEKFNHHP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +++ G+ + ++ Q+++DFF+E R Sbjct: 121 KVFGGLFKDQAAQMLKDFFREIR 143 >gi|78485955|ref|YP_391880.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Thiomicrospira crunogena XCL-2] gi|78364241|gb|ABB42206.1| tRNA-adenosine deaminase [Thiomicrospira crunogena XCL-2] Length = 166 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M+ AL A+ A + EIPVGAV V ++K+I+ N+ + D TAHAE++A+R Sbjct: 12 EQDIFWMTHALSLAKKAEQQGEIPVGAVLVKDSKLIAEGWNQTIQAHDPTAHAEVVALRK 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L ++ LYVTLEPC MCA A+ AR++RL A + + G + Sbjct: 72 AGIEEENYRLNDLTLYVTLEPCPMCAGAMVHARLKRLVIAAKDFRTGAAGSLINLVQEPR 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E + +++ FF++RR Sbjct: 132 LNHQVKTDFGVLESEASEMLSGFFRKRR 159 >gi|77166061|ref|YP_344586.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Nitrosococcus oceani ATCC 19707] gi|254436457|ref|ZP_05049961.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Nitrosococcus oceani AFC27] gi|76884375|gb|ABA59056.1| tRNA-adenosine deaminase [Nitrosococcus oceani ATCC 19707] gi|207087927|gb|EDZ65202.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Nitrosococcus oceani AFC27] Length = 155 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 76/148 (51%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +K +M AL A+ A E+PVGAV V +++ + N D TAHAEI AIR Sbjct: 8 EKDIPWMHHALALARYAEEAGEVPVGAVVVQEGEMVGKGWNCPINSHDPTAHAEIQAIRA 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L LYVTLEPC MCA AI ARI+R+ +GA +PKGG + Sbjct: 68 ASQKLGNYRLVGTTLYVTLEPCAMCAGAIIQARIQRVVFGAFDPKGGAAGSALNILPGER 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E G+ + I+ FF+ RR Sbjct: 128 LNHQVECQGGVLAESCGAILSAFFRARR 155 >gi|294140156|ref|YP_003556134.1| cytidine/deoxycytidylate deaminase family protein [Shewanella violacea DSS12] gi|293326625|dbj|BAJ01356.1| cytidine/deoxycytidylate deaminase family protein [Shewanella violacea DSS12] Length = 169 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 74/149 (49%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FMS A+E A A E+PVGAV V + ++IS N L D +AHAE+ +R Sbjct: 1 MALDQHFMSMAMEMAHKAEAVGEVPVGAVLVKHGQVISAGFNYCIGLHDPSAHAEMQCLR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L + LYVTLEPC MCA A+ +RI RL +GA + K G Sbjct: 61 QAGKVTENYRLLDTTLYVTLEPCAMCAGAMVHSRIARLVFGAKDEKTGAAGTVIDLVRHP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + + FF+ RR Sbjct: 121 DFNHQLQVSDGVLADECSEQLSQFFRRRR 149 >gi|330718918|ref|ZP_08313518.1| cytosine/adenosine deaminase [Leuconostoc fallax KCTC 3537] Length = 169 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 61/148 (41%), Positives = 87/148 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ N FM AL+EA+ A E+P+GAV V +N+II+RA N + + TAHAE+LAI Sbjct: 10 EQINDFMQAALDEARQAGSEGEVPIGAVIVHDNQIIARAHNHREQGQQATAHAELLAIEA 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L+VTLEPC MCA AI +RI +YYGA + KGG +++ Sbjct: 70 ANQAAQSWRLENTALFVTLEPCMMCAGAIINSRIPVIYYGAQDAKGGAVKSLYTLLEDER 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E++PGI Q++Q+FF E R Sbjct: 130 LNHRVEVHPGIKSDECGQLLQNFFSEIR 157 >gi|187735588|ref|YP_001877700.1| CMP/dCMP deaminase zinc-binding [Akkermansia muciniphila ATCC BAA-835] gi|187425640|gb|ACD04919.1| CMP/dCMP deaminase zinc-binding [Akkermansia muciniphila ATCC BAA-835] Length = 181 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A++E++ A ++ E+PVGA+ V + ++I R N+ LKD TAHAE++A+ Sbjct: 12 SDEWFMRQAMKESRKALVKGEVPVGAIVVKDGRVIGRGWNQVETLKDATAHAEMIALTAA 71 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-LAT 121 L L LYVT EPC MCA AI R R+ +G + K G Sbjct: 72 QEALGDWRLEGCTLYVTKEPCPMCAGAIVHCRPDRVVFGCPDAKTGAAGGWINLLDSNPP 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ PG+ +Q+FF+ R Sbjct: 132 LNHKCEVRPGVLGDECLLHLQEFFRAAR 159 >gi|52424459|ref|YP_087596.1| hypothetical protein MS0404 [Mannheimia succiniciproducens MBEL55E] gi|52306511|gb|AAU37011.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 176 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 79/147 (53%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62 M+ AL A A EIPVGAV V II N + D TAHAEI+A+R Sbjct: 8 DEKMMNRALFLADKAEALGEIPVGAVLVDERGNIIGEGWNLSIVNSDPTAHAEIIALRNA 67 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L LYVTLEPCTMCA AI +RI+RL +GAS+ K G + + F+ Sbjct: 68 AQKIQNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAVGSRFHFFEDYKM 127 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + + Q + FF++RR Sbjct: 128 NHGVEITSGVLQDQCSQKLSRFFQKRR 154 >gi|302334869|ref|YP_003800076.1| tRNA-adenosine deaminase [Olsenella uli DSM 7084] gi|301318709|gb|ADK67196.1| tRNA-adenosine deaminase [Olsenella uli DSM 7084] Length = 163 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 61/147 (41%), Positives = 83/147 (56%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM ALEEA AA +E+P+GAV V ++I+RA NR D +AHAE A+ Sbjct: 11 EDERFMGLALEEACIAATEDEVPIGAVVVCGGEVIARAHNRRETDGDPSAHAEFSAMVQA 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L + L +YVTLEPC MCA + AR+ R YGA++PKGG + A Sbjct: 71 ARALGRWRLTGCTVYVTLEPCLMCAGLMVNARVDRCVYGAADPKGGAVGTLYDVSDDARL 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +HS + G+ E QI++DFF+ RR Sbjct: 131 NHSFPVTAGVLEDECAQILRDFFRVRR 157 >gi|330445259|ref|ZP_08308911.1| tRNA-specific adenosine deaminase monomer [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489450|dbj|GAA03408.1| tRNA-specific adenosine deaminase monomer [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 163 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 53/142 (37%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+E A A E+PVGAV V N ++I NR+ D TAHAEI+A+R ++L Sbjct: 1 MRRAMELAAKAEGEGEVPVGAVVVHNGQVIGEGWNRSIGQHDATAHAEIMALRQAGKVLE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + +YVTLEPC MCA A+ +R+ ++ YGA + K G + + +H Sbjct: 61 NYRLLDTTVYVTLEPCPMCAGAMVHSRVGKVVYGADDLKTGAAGSTMNLLSYDGVNHHVG 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ R +Q FFK RR Sbjct: 121 LVSGVLADECRAQLQAFFKRRR 142 >gi|239833547|ref|ZP_04681875.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum intermedium LMG 3301] gi|239821610|gb|EEQ93179.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum intermedium LMG 3301] Length = 173 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 91/148 (61%), Positives = 109/148 (73%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M ALEEA+ A R E+P+GAV V II+RAGNR REL DVTAHAE+LAIR Sbjct: 26 QNDTTPMEIALEEARAAGARGEVPIGAVIVHQGTIIARAGNRTRELNDVTAHAEVLAIRE 85 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L E L DLYVTLEPC MCAAAIS ARIRRLYYGA++PKGGG+E+G +FYT T Sbjct: 86 AGETLQSERLVGCDLYVTLEPCAMCAAAISFARIRRLYYGATDPKGGGVEHGPRFYTQPT 145 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 CHH PEIY G SE S++I+++FF++RR Sbjct: 146 CHHVPEIYAGFSEGDSQKILREFFRDRR 173 >gi|27382607|ref|NP_774136.1| nitrogen fixation protein [Bradyrhizobium japonicum USDA 110] gi|27355779|dbj|BAC52761.1| nitrogen fixation protein [Bradyrhizobium japonicum USDA 110] Length = 152 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 73/143 (51%), Positives = 103/143 (72%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+ A+NA E+P+G V V N ++I+ A NR D TAHAEI+A+R + + Sbjct: 10 FMDLALKTAENAGKAGEVPIGCVVVRNYEVIATAANRTLTDYDPTAHAEIVALREAAKKI 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L + DLYVTLEPCTMCA AIS AR+RRLYYGA++PKGG +E+G +F+ TCHH+P Sbjct: 70 GSERLVDCDLYVTLEPCTMCAGAISFARVRRLYYGAADPKGGAVESGVRFFASPTCHHAP 129 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++Y G+ E + +++++FF+ERR Sbjct: 130 DVYSGVGESEAARLLKEFFRERR 152 >gi|149908700|ref|ZP_01897361.1| putative zinc-binding protein [Moritella sp. PE36] gi|149808242|gb|EDM68181.1| putative zinc-binding protein [Moritella sp. PE36] Length = 182 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M A+ A A +E+PVGAV VLN+KII N++ D TAHAEI+A+R Sbjct: 22 LQADERWMQHAIMLAGKAEAIDEVPVGAVIVLNDKIIGEGWNQSIISHDATAHAEIMALR 81 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L + LYVTLEPC+MCA A+ +R++RL YGA + K G + A Sbjct: 82 EAGKTVENYRLIDATLYVTLEPCSMCAGAMVHSRVKRLVYGAVDLKTGAAGSVFNLVEHA 141 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + ++ FFK RR Sbjct: 142 QLNHQIEVRSGVFASETGALLSQFFKRRR 170 >gi|69245245|ref|ZP_00603323.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Enterococcus faecium DO] gi|257880130|ref|ZP_05659783.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,230,933] gi|257882362|ref|ZP_05662015.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,502] gi|257885559|ref|ZP_05665212.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,501] gi|257891221|ref|ZP_05670874.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,410] gi|257894033|ref|ZP_05673686.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,408] gi|258614535|ref|ZP_05712305.1| cytidine/deoxycytidylate deaminase family protein [Enterococcus faecium DO] gi|260560261|ref|ZP_05832437.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium C68] gi|293560645|ref|ZP_06677132.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1162] gi|294617818|ref|ZP_06697430.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1679] gi|294621156|ref|ZP_06700343.1| tRNA-specific adenosine deaminase [Enterococcus faecium U0317] gi|314938786|ref|ZP_07846059.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0133a04] gi|314941552|ref|ZP_07848438.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0133C] gi|314947607|ref|ZP_07851016.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0082] gi|314951363|ref|ZP_07854416.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0133A] gi|314993109|ref|ZP_07858496.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0133B] gi|314996760|ref|ZP_07861775.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0133a01] gi|68195920|gb|EAN10354.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Enterococcus faecium DO] gi|257814358|gb|EEV43116.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,230,933] gi|257818020|gb|EEV45348.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,502] gi|257821415|gb|EEV48545.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,501] gi|257827581|gb|EEV54207.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,410] gi|257830412|gb|EEV57019.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,408] gi|260073606|gb|EEW61932.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium C68] gi|291595929|gb|EFF27210.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1679] gi|291599272|gb|EFF30302.1| tRNA-specific adenosine deaminase [Enterococcus faecium U0317] gi|291605396|gb|EFF34843.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1162] gi|313589110|gb|EFR67955.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0133a01] gi|313592389|gb|EFR71234.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0133B] gi|313596469|gb|EFR75314.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0133A] gi|313599640|gb|EFR78483.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0133C] gi|313641895|gb|EFS06475.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0133a04] gi|313645848|gb|EFS10428.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium TX0082] Length = 171 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 54/141 (38%), Positives = 78/141 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL EA+ A + +E+P+GAV VL+ K+I R N +D T HAE+LAI+ C Sbjct: 12 EKWMRLALAEAKKAEMLHEVPIGAVVVLDGKVIGRGYNLRETTQDATTHAEMLAIKEACE 71 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L + L+VTLEPC MC+ A+ L+R+ +Y+GA +PKGG +H Sbjct: 72 KVGSWRLEDAALFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERFNH 131 Query: 125 SPEIYPGISEQRSRQIIQDFF 145 + GI E I+ DFF Sbjct: 132 QAYVEGGILEDECGMILTDFF 152 >gi|225686059|ref|YP_002734031.1| cytidine and deoxycytidylate deaminase family protein [Brucella melitensis ATCC 23457] gi|256262820|ref|ZP_05465352.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 2 str. 63/9] gi|225642164|gb|ACO02077.1| cytidine and deoxycytidylate deaminase family protein [Brucella melitensis ATCC 23457] gi|263092641|gb|EEZ16862.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 2 str. 63/9] gi|326410383|gb|ADZ67447.1| cytidine and deoxycytidylate deaminase family protein [Brucella melitensis M28] Length = 157 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 93/142 (65%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A R E+P+GAV V + +II+RAGNR RE DVTAHAEIL IR +L Sbjct: 16 MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 75 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT TCHH+PE Sbjct: 76 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQLTCHHAPE 135 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IYPG E +R+I++DFF+E+R Sbjct: 136 IYPGFCEADARKILKDFFREKR 157 >gi|157376253|ref|YP_001474853.1| cytidine/deoxycytidylate deaminase family protein [Shewanella sediminis HAW-EB3] gi|157318627|gb|ABV37725.1| cytidine/deoxycytidylate deaminase family protein [Shewanella sediminis HAW-EB3] Length = 177 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + FM+ A+ +A A R E+PVGAV V ++K+++ N D +AHAE+ +R Sbjct: 4 LDRDIHFMALAMLQAAEAEARGEVPVGAVLVKDDKVVAVGSNDCIGQHDPSAHAEMQCLR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R++ L + LYVTLEPC MCA A+ +R+ RL +GA + K G + Sbjct: 64 EAGRLVENYRLLDTTLYVTLEPCAMCAGAMVHSRVSRLVFGAKDEKTGAAGSVVDLVRHP 123 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ EQ + + FF+ RR Sbjct: 124 RFNHQLEVNNGVLEQECSEQLSQFFRRRR 152 >gi|89898061|ref|YP_515171.1| cytosine/adenosine deaminases [Chlamydophila felis Fe/C-56] gi|89331433|dbj|BAE81026.1| cytosine/adenosine deaminases [Chlamydophila felis Fe/C-56] Length = 157 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM AL EA+ A +E+PVG V V +NKII+R N +L+D TAHAEIL I Sbjct: 3 IEKDIFFMKQALREARQAYDEDEVPVGCVIVKDNKIIARGHNTIEKLQDPTAHAEILCIG 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + LY TLEPC MCA AI AR+RR+ + A + + G + +T Sbjct: 63 AAAQYLENWRLVDTVLYCTLEPCLMCAGAIQQARVRRIVWAAPDLRLGAGGSWINVFTEK 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E + GI + S Q+++ FF E+R Sbjct: 123 HPFHRVECFSGICREESEQLMKQFFIEKR 151 >gi|269216548|ref|ZP_06160402.1| tRNA-specific adenosine deaminase [Slackia exigua ATCC 700122] gi|269130077|gb|EEZ61159.1| tRNA-specific adenosine deaminase [Slackia exigua ATCC 700122] Length = 212 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM A EA+ A E+P+GAV V + ++++RA NR +D + HAE A+R Sbjct: 54 IEKDESFMREAYAEARRAFEEGEVPIGAVVVCDGRVVARAHNRREADRDPSGHAEFSAMR 113 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + L +YVT+EPC MCA + ARI R +GA +PK G + + + Sbjct: 114 AAAQALGRWRLSGCTVYVTVEPCIMCAGLMHQARIDRCVWGAPDPKAGALGSLYAIHADE 173 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E G+ + +++DFF RR Sbjct: 174 RLNHRFESTGGVWATQCGSLMRDFFACRR 202 >gi|310828329|ref|YP_003960686.1| alpha amylase catalytic region [Eubacterium limosum KIST612] gi|308740063|gb|ADO37723.1| alpha amylase catalytic region [Eubacterium limosum KIST612] Length = 630 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 57/142 (40%), Positives = 86/142 (60%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 MS A+EEA+ E+PVGAV + N +II+ A N+ L+D TAHAE+L IR + L Sbjct: 489 MSKAIEEAERGIEEGEVPVGAVILHNGEIIAAAHNQKETLQDPTAHAEMLVIREASKKLG 548 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L + +LYVT EPC MC A+ +RIR+L YG + GG+E + ++ E Sbjct: 549 RWRLDDCELYVTAEPCPMCMGAVIQSRIRKLVYGTWETRFGGVETTAELGKHPMLSNATE 608 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IY GI E++ +++++ FF+ R Sbjct: 609 IYSGICEEKCQELLERFFQNNR 630 >gi|300717977|ref|YP_003742780.1| tRNA-specific adenosine deaminase [Erwinia billingiae Eb661] gi|299063813|emb|CAX60933.1| tRNA-specific adenosine deaminase [Erwinia billingiae Eb661] Length = 171 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V +K I NR D TAHAEI+A+R G Sbjct: 6 SDEFWMRHALMLARRAWEEGEVPVGAVLVQGDKAIGEGWNRPIGHHDPTAHAEIMALRQG 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++L L + LYVTLEPC MCA A+ RI RL +GA + K G + A Sbjct: 66 GKVLENYRLLDTTLYVTLEPCVMCAGAMVHGRIGRLVFGARDEKTGAAGSLIDVLGHAGM 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + ++ DFF+ RR Sbjct: 126 NHQVKVEEGMLAEECAGMLSDFFRHRR 152 >gi|293390603|ref|ZP_06634937.1| tRNA-specific adenosine deaminase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951137|gb|EFE01256.1| tRNA-specific adenosine deaminase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 175 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 61/147 (41%), Positives = 82/147 (55%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL A A EIPVGAV V +II N + D TAHAEI+A+R G Sbjct: 9 DEKFMRHALMLAGKAEALGEIPVGAVLVSEAGEIIGEGWNLSIIHSDPTAHAEIVALRQG 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + LYVTLEPCTMCA AI +RI+RL +GA++ K G + + F+ Sbjct: 69 GQKLQNYRLLNITLYVTLEPCTMCAGAILHSRIKRLVFGAADYKTGAVGSRFHFFDDYKM 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ +Q + + FF++RR Sbjct: 129 NHVIEITGGVLQQECSEKLSAFFQKRR 155 >gi|103488226|ref|YP_617787.1| CMP/dCMP deaminase, zinc-binding [Sphingopyxis alaskensis RB2256] gi|98978303|gb|ABF54454.1| tRNA-adenosine deaminase [Sphingopyxis alaskensis RB2256] Length = 155 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 73/142 (51%), Positives = 91/142 (64%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+ A+ AA E+PVGAV V + +I+ NR RE D TAHAEI+A+RM L Sbjct: 10 MRRALDLARIAADWGEVPVGAVIVKDGAVIAEGHNRPRESHDPTAHAEIVAMRMAAAKLG 69 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L DLYVTLEPC MCA AI+ ARI RLYYGA +PKGG + +G + + T HH PE Sbjct: 70 NERLDGCDLYVTLEPCAMCAGAIAHARIARLYYGADDPKGGAVVHGPRLFAQPTVHHRPE 129 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IY GI E + +++ FF RR Sbjct: 130 IYDGIGESEAAGLLRAFFAARR 151 >gi|322378196|ref|ZP_08052680.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus sp. M334] gi|321280826|gb|EFX57842.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus sp. M334] Length = 155 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ VFM AL EA+ A +EIP+G V V + II R N EL+ HAEI+AI Sbjct: 6 EEKEVFMREALREAEIALEHDEIPIGCVIVKDGAIIGRGHNAREELQRAVMHAEIMAIEN 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 66 ANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDER 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ GI E I+Q+FF+ RR Sbjct: 126 LNHRVDVETGILEDECAAIMQNFFRNRR 153 >gi|119946930|ref|YP_944610.1| CMP/dCMP deaminase, zinc-binding [Psychromonas ingrahamii 37] gi|119865534|gb|ABM05011.1| CMP/dCMP deaminase, zinc-binding [Psychromonas ingrahamii 37] Length = 176 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ AL A A EIPVGAV V +NKI++ N + + AHAEI+AI+ Sbjct: 13 NDQKWMAYALSLADKAESFGEIPVGAVIVKDNKIVAEGWNLSIINHNACAHAEIMAIQSA 72 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L + LYVTLEPC MCA A+ ARI+RL YGA + K G + Sbjct: 73 GQKIQNYRLIDCTLYVTLEPCAMCAGALVHARIKRLVYGAGDYKTGAAGSVFNLVQSEQL 132 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + S I FFK RR Sbjct: 133 NHQLEVTAGVFAEESATKISAFFKRRR 159 >gi|315037609|ref|YP_004031177.1| cytidine-deoxycytidylate deaminase [Lactobacillus amylovorus GRL 1112] gi|325956088|ref|YP_004286698.1| cytidine-deoxycytidylate deaminase [Lactobacillus acidophilus 30SC] gi|312275742|gb|ADQ58382.1| cytidine-deoxycytidylate deaminase [Lactobacillus amylovorus GRL 1112] gi|325332653|gb|ADZ06561.1| cytidine-deoxycytidylate deaminase [Lactobacillus acidophilus 30SC] Length = 168 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 84/149 (56%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+ +A+ A + E+P+GAV V + K+I NR +D T HAE++AI+ Sbjct: 5 DDKQKYMQLAIAQAKEAEKQGEVPIGAVIVDPDGKVIGTGYNRRELDEDATQHAEMIAIK 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + +T+ Sbjct: 65 EACKNLGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFTVE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P G+ + Q+++DFF+ R Sbjct: 125 KFNHHPHAIRGLYRDQCAQMLKDFFRAIR 153 >gi|269965211|ref|ZP_06179345.1| zinc-binding domain protein [Vibrio alginolyticus 40B] gi|269830197|gb|EEZ84424.1| zinc-binding domain protein [Vibrio alginolyticus 40B] Length = 169 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 54/142 (38%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+E A+ A E+PVGAV V + +II+ NR+ D TAHAEI +R + L Sbjct: 1 MRRAMELAEQAEAEGEVPVGAVLVKDGEIIAEGWNRSIGTNDATAHAEIQTLRKAGQKLE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +R++R+ +GA + K G + +H Sbjct: 61 NYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAAYHYAL 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ E R +Q FFK RR Sbjct: 121 VEKGLLEDECRTQLQAFFKRRR 142 >gi|145628165|ref|ZP_01783966.1| preprotein translocase subunit SecA [Haemophilus influenzae 22.1-21] gi|144979940|gb|EDJ89599.1| preprotein translocase subunit SecA [Haemophilus influenzae 22.1-21] Length = 159 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 62/143 (43%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A A EIPVGAV V + II N + D TAHAEI+A+R G + + Sbjct: 1 MRYALELADKAEALGEIPVGAVLVDDAGNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMCA AI +RI+RL +GAS+ K G I + F+ +H+ Sbjct: 61 QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q + FF++RR Sbjct: 121 EITSGVLAEECSQKLSTFFQKRR 143 >gi|260771319|ref|ZP_05880245.1| tRNA-specific adenosine-34 deaminase [Vibrio furnissii CIP 102972] gi|260613635|gb|EEX38828.1| tRNA-specific adenosine-34 deaminase [Vibrio furnissii CIP 102972] Length = 189 Score = 214 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+ A+ A E+PVGAV V + II+ NR+ D TAHAEI +R Sbjct: 11 EDEQFMRRAMALAEQAEAEGEVPVGAVLVKDGHIIAEGWNRSIGACDATAHAEIQVLRQA 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L E LYVTLEPC MCA A+ +R++R+ YGA + K G ++ Sbjct: 71 GEALHNYRLLETTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAA 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E RQ +Q FF+ RR Sbjct: 131 YHYATVEKGLLEDECRQQLQAFFQRRR 157 >gi|332534515|ref|ZP_08410352.1| tRNA-specific adenosine-34 deaminase [Pseudoalteromonas haloplanktis ANT/505] gi|332036083|gb|EGI72560.1| tRNA-specific adenosine-34 deaminase [Pseudoalteromonas haloplanktis ANT/505] Length = 171 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 85/147 (57%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL A+ A L +EIPVGA+ V +N++IS NR+ D +AHAE++A+R Sbjct: 6 NDSYWMEQALLYAKQAELLDEIPVGAIVVKDNQLISVGYNRSITDNDPSAHAEMIAVREA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++L+ L + LYVTLEPC+MCA + +RI+RL +GA + K G + Sbjct: 66 GKVLNNYRLIDCTLYVTLEPCSMCAGLLVHSRIKRLVFGALDAKTGSAGSIMNLLQEPRL 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ Q+ I +FFK RR Sbjct: 126 NHQVEVCGGVLAQQCGDTISNFFKRRR 152 >gi|227891209|ref|ZP_04009014.1| nucleoside deaminase [Lactobacillus salivarius ATCC 11741] gi|227867083|gb|EEJ74504.1| nucleoside deaminase [Lactobacillus salivarius ATCC 11741] Length = 169 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 54/140 (38%), Positives = 75/140 (53%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL EA+ AA E+P+G V V + KII R N ++ T HAE+LAI Sbjct: 13 KFMKEALFEAKLAAKIGEVPIGCVIVKDGKIIGRGHNLREHSQNATLHAEMLAIEEANET 72 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 ++ L + L+VTLEPC MC+ AI +RI +YYGAS+ K G + + +H Sbjct: 73 VNSWRLVDTQLFVTLEPCPMCSGAIINSRIPEVYYGASDSKAGTVGTLMNLLEDSRFNHQ 132 Query: 126 PEIYPGISEQRSRQIIQDFF 145 + GI E I++DFF Sbjct: 133 SFVEKGILENECASILKDFF 152 >gi|116491396|ref|YP_810940.1| tRNA-adenosine deaminase [Oenococcus oeni PSU-1] gi|116092121|gb|ABJ57275.1| tRNA-adenosine deaminase [Oenococcus oeni PSU-1] Length = 156 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 57/145 (39%), Positives = 85/145 (58%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL++AQ A E+P+GAV V +N++I+ NR + TAHAE L I Sbjct: 9 EEFMQLALKQAQTAFDEGEVPIGAVLVKDNQVIAADHNRKEQSGIATAHAEKLVIEGANC 68 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + L+VT+EPC MC AI +RI RL+YGA++PK GG+ + + +H Sbjct: 69 SLGDWRLNDCSLFVTIEPCVMCCGAIIQSRIPRLFYGAADPKFGGVSSLYHLLEDSRSNH 128 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+YP + ++S ++QDFF++ R Sbjct: 129 FVEVYPDVLAKQSANLMQDFFRKLR 153 >gi|315173580|gb|EFU17597.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX1346] Length = 173 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM A+ EA+ A +E+P+GAV V +II R N ++ TAHAE+ AI+ Sbjct: 11 EEKEFFMREAIAEAKKAEGLDEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQE 70 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 CR + L E L+VTLEPC MC+ A+ LARI +YYGA++PK G Sbjct: 71 ACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDER 130 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R ++ FFK+ R Sbjct: 131 FNHVAYVEAGVLEEECRLLLVQFFKKLR 158 >gi|239623044|ref|ZP_04666075.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239522411|gb|EEQ62277.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 202 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 49/146 (33%), Positives = 76/146 (52%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM A+ +A AA ++P+G V V +II+R NR K V +HAEI++I+ C Sbjct: 54 DEGFMGEAIRQAHKAAALGDVPIGCVIVRQGQIIARGYNRRNADKSVLSHAEIISIKRAC 113 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L L + +YVTLEPC MC+ AI ARI R+ G N K G + + Sbjct: 114 KKLGDWRLEDCTMYVTLEPCPMCSGAIVQARIPRVVIGCMNAKAGCAGSVLDLLHEPGFN 173 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ + ++++FF++ R Sbjct: 174 HQVDTRAGVLGEECSGMMKEFFRKIR 199 >gi|221195061|ref|ZP_03568117.1| tRNA-specific adenosine deaminase [Atopobium rimae ATCC 49626] gi|221184964|gb|EEE17355.1| tRNA-specific adenosine deaminase [Atopobium rimae ATCC 49626] Length = 198 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 52/147 (35%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL EA AA E+P+GAV V + ++I+ A NR +AHAE LA+ Sbjct: 43 RDEKYMRLALSEAAAAAAEGEVPIGAVVVCDGEVIASAHNRREVDNSPSAHAEFLAMEEA 102 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R+L + L +YVTLEPC MCA + +RI R +GA +PKGG + + Sbjct: 103 SRVLKRWRLTGCTVYVTLEPCLMCAGLMVNSRIDRCVFGACDPKGGALGTLYDVSCDSRL 162 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + ++ FF+ERR Sbjct: 163 NHEFQVTSGVLANEAAAQLKAFFRERR 189 >gi|293552936|ref|ZP_06673591.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1039] gi|291602912|gb|EFF33109.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1039] Length = 171 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 53/141 (37%), Positives = 78/141 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL EA+ A + +E+P+GAV VL+ K++ R N +D T HAE+LAI+ C Sbjct: 12 EKWMRLALAEAKKAEMLHEVPIGAVVVLDGKVVGRGYNLRETTQDATTHAEMLAIKEACE 71 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L + L+VTLEPC MC+ A+ L+R+ +Y+GA +PKGG +H Sbjct: 72 KVGSWRLEDAALFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERFNH 131 Query: 125 SPEIYPGISEQRSRQIIQDFF 145 + GI E I+ DFF Sbjct: 132 QAYVEGGILEDECGMILTDFF 152 >gi|113867903|ref|YP_726392.1| cytosine deaminase [Ralstonia eutropha H16] gi|113526679|emb|CAJ93024.1| cytosine deaminase [Ralstonia eutropha H16] Length = 200 Score = 213 bits (544), Expect = 7e-54, Method: Composition-based stats. Identities = 56/144 (38%), Positives = 84/144 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M ALEEA+ A E+PVGAV V N+ II+R N D +AHAE+ A+R Sbjct: 24 ERDARYMRAALEEARLAEAAGEVPVGAVVVWNDTIIARGHNLPIRSVDPSAHAEMQALRA 83 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 +++ +PE +LYVTLEPC MC+ AI AR+R + +GA++PK G + + A Sbjct: 84 AAQVIGNYRMPECELYVTLEPCVMCSGAILHARLRHVVFGAADPKTGAAGSVLNLFEQAQ 143 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 +H I G+ Q+++DFF Sbjct: 144 LNHQTTIAGGVLADTCGQMLKDFF 167 >gi|94969013|ref|YP_591061.1| tRNA-adenosine deaminase [Candidatus Koribacter versatilis Ellin345] gi|94551063|gb|ABF40987.1| tRNA-adenosine deaminase [Candidatus Koribacter versatilis Ellin345] Length = 152 Score = 213 bits (544), Expect = 7e-54, Method: Composition-based stats. Identities = 65/147 (44%), Positives = 87/147 (59%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +FM AL EA A E+P+GAV V +KII R NR D TAHAEI+AIR Sbjct: 2 SDELFMEEALREAARAQASGEVPIGAVVVYQDKIIGRGWNRPAFECDPTAHAEIIAIREA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L L + +L+VTLEPC MCA AI+ ARIRRL Y A +PK G +++ Q Sbjct: 62 GRELGNYRLTDCELFVTLEPCAMCAGAITHARIRRLIYAADDPKAGAVKSALQVLNHPAL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ R+ +++Q FF+++R Sbjct: 122 NHQVEITSGVLAGRAMEMLQAFFRDKR 148 >gi|326203924|ref|ZP_08193786.1| CMP/dCMP deaminase zinc-binding [Clostridium papyrosolvens DSM 2782] gi|325986022|gb|EGD46856.1| CMP/dCMP deaminase zinc-binding [Clostridium papyrosolvens DSM 2782] Length = 151 Score = 213 bits (543), Expect = 7e-54, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 83/148 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A+++A+ A + E PVGA+ V + ++I+ N+ E +DVT+HAEI A++ Sbjct: 3 TRNEQFMQEAIKQAKEAYAKGESPVGAIVVKDGELIASGCNQKEEKQDVTSHAEIEALKK 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L D+YVTLEPC MCA AI +RI+ LY GA + K G + + + Sbjct: 63 AAKKLGTWRLDGCDMYVTLEPCAMCAGAIIQSRIKTLYIGAMDKKAGAAGSVIDLFRVPQ 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + I+ +FFK R Sbjct: 123 FNHRVDVVYGLMFEECGNILTEFFKRLR 150 >gi|325270697|ref|ZP_08137293.1| tRNA-specific adenosine deaminase [Prevotella multiformis DSM 16608] gi|324986992|gb|EGC18979.1| tRNA-specific adenosine deaminase [Prevotella multiformis DSM 16608] Length = 199 Score = 213 bits (543), Expect = 7e-54, Method: Composition-based stats. Identities = 67/149 (44%), Positives = 87/149 (58%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKK +M AL EA+ A EIPVGAV V ++II+RA N L DVTAHAE+ AI Sbjct: 56 MKKDLYYMRQALAEAEAAYREGEIPVGAVVVCRDRIIARAHNLTETLNDVTAHAEMQAIT 115 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M L + L + LYVTLEPCTMCA AI A++RR+ YG + K G + Y Sbjct: 116 MAASGLGGKYLQDCTLYVTLEPCTMCAGAIGWAQLRRMVYGCPDEKRG-----YRLYAPR 170 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ E+ + ++Q FF+ERR Sbjct: 171 ALHPRAEVVCGVMEEECKALMQRFFRERR 199 >gi|145641906|ref|ZP_01797480.1| preprotein translocase subunit SecA [Haemophilus influenzae R3021] gi|145273385|gb|EDK13257.1| preprotein translocase subunit SecA [Haemophilus influenzae 22.4-21] Length = 147 Score = 213 bits (543), Expect = 7e-54, Method: Composition-based stats. Identities = 60/143 (41%), Positives = 79/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A EIPVGAV V + II N + D TAHAEI+A+R G + + Sbjct: 1 MRYALTLADKAEALGEIPVGAVLVDDSGNIIGEGWNLSIVQNDPTAHAEIIALRNGAKNI 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMCA AI +RI+RL +G S+ K G I + F+ +H+ Sbjct: 61 QNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGTSDYKTGAIGSRFHFFDDYKMNHTL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q + FF++RR Sbjct: 121 EITSGVLAEECSQKLSTFFQKRR 143 >gi|167623310|ref|YP_001673604.1| zinc-binding CMP/dCMP deaminase [Shewanella halifaxensis HAW-EB4] gi|167353332|gb|ABZ75945.1| CMP/dCMP deaminase zinc-binding [Shewanella halifaxensis HAW-EB4] Length = 163 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 52/142 (36%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A++ A A + E+PVGAV V + +++S N + L D +AHAE+ +R +I+ Sbjct: 1 MKMAMDMAIKAEEKGEVPVGAVLVKDGEVLSAGFNFSIGLHDPSAHAEMQCLRQAGQIMQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA AI +RI RL +GA + K G + +H E Sbjct: 61 NYRLLDTTLYVTLEPCAMCAGAIVHSRIGRLVFGAKDEKTGAAGTVIDIVRHSAFNHQVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ E + + FFK RR Sbjct: 121 VSSGVLESECSEQLSAFFKRRR 142 >gi|294102217|ref|YP_003554075.1| CMP/dCMP deaminase zinc-binding protein [Aminobacterium colombiense DSM 12261] gi|293617197|gb|ADE57351.1| CMP/dCMP deaminase zinc-binding protein [Aminobacterium colombiense DSM 12261] Length = 156 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 61/148 (41%), Positives = 84/148 (56%), Gaps = 2/148 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM+ AL+EA+ AA E+PV A+ V NN++I + N + D TAHAEI+AIR Sbjct: 5 DTDIFFMNMALDEARKAAEHGEVPVAALVVRNNEVIGKGSNS--KHLDPTAHAEIIAIRE 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L LYVTLEPC MCA AI L+RI+ L YGA++P+ G + Sbjct: 63 ATERLGTWNLRGSTLYVTLEPCPMCAGAIVLSRIKCLVYGAADPRAGACGTLYNIVQDSR 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ Q S ++ D+FK+RR Sbjct: 123 LNHRCEVIKGVLAQESANLLWDYFKKRR 150 >gi|312884996|ref|ZP_07744685.1| tRNA-specific adenosine deaminase [Vibrio caribbenthicus ATCC BAA-2122] gi|309367328|gb|EFP94891.1| tRNA-specific adenosine deaminase [Vibrio caribbenthicus ATCC BAA-2122] Length = 156 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 55/142 (38%), Positives = 79/142 (55%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+E A A E+PVGA+ V + +II+ NR+ D TAHAEI +R +IL Sbjct: 1 MRRAIELAHKAEQEGEVPVGALLVKDGEIIAEGWNRSISTHDATAHAEIEVLRKAGKILE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +R++R+ +GA + K G + + +H + Sbjct: 61 NYRLNDTTLYVTLEPCPMCAGALLHSRVKRIVFGAFDKKTGAAGSVLNLFEHQAAYHYAD 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I G+ E + R +Q FFK RR Sbjct: 121 IEKGVLEHQCRTQLQSFFKRRR 142 >gi|227903275|ref|ZP_04021080.1| nucleoside deaminase [Lactobacillus acidophilus ATCC 4796] gi|227869080|gb|EEJ76501.1| nucleoside deaminase [Lactobacillus acidophilus ATCC 4796] Length = 231 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+++A+ A + E+P+GAV V KII NR +D T HAE++AI+ C+ Sbjct: 73 YMQLAIDKAKEAEKQGEVPIGAVVVDPTGKIIGTGYNRRELDEDSTQHAEMIAIKEACKN 132 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + + + +H Sbjct: 133 LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFAVERFNHH 192 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P G+ + Q+++DFF+ R Sbjct: 193 PHAIRGLYRDQCAQMLKDFFRAIR 216 >gi|145629986|ref|ZP_01785768.1| hypothetical protein CGSHi22421_08043 [Haemophilus influenzae R3021] gi|144984267|gb|EDJ91690.1| hypothetical protein CGSHi22421_08043 [Haemophilus influenzae R3021] Length = 159 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A A + EIPVGAV V + II N + D TAHAEI+A+R G + + Sbjct: 1 MRYALELADKAEVLGEIPVGAVLVDDAGNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMCA AI +RI+RL +GAS+ K G I + F+ +H+ Sbjct: 61 QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q + FF++RR Sbjct: 121 EITSGVLAEECSQKLSTFFQKRR 143 >gi|32477503|ref|NP_870497.1| cytosine deaminase [Rhodopirellula baltica SH 1] gi|32448057|emb|CAD77574.1| cytosine deaminase [Rhodopirellula baltica SH 1] gi|327542170|gb|EGF28663.1| CMP/dCMP deaminase zinc-binding protein [Rhodopirellula baltica WH47] Length = 159 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 57/146 (39%), Positives = 86/146 (58%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A+E AQ+AAL +E+PVGA+ V + I+ A N+ L D TAHAE++AI Sbjct: 9 DRHWMQRAIEMAQSAALEDEVPVGAIIVRSGTAIAAAANQREALHDPTAHAEMIAITQAA 68 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L + LYVTLEPC MCA AI AR+ R+ +GAS+PK G + + + T + + Sbjct: 69 ASIENWRLEQTTLYVTLEPCLMCAGAILQARVPRVVFGASDPKAGAVTSLYEVLTDSRLN 128 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H EI G+ ++ ++ +FF +R Sbjct: 129 HRCEITHGVMAEQCGHLLTEFFSAKR 154 >gi|332686456|ref|YP_004456230.1| tRNA-specific adenosine-34 deaminase [Melissococcus plutonius ATCC 35311] gi|332370465|dbj|BAK21421.1| tRNA-specific adenosine-34 deaminase [Melissococcus plutonius ATCC 35311] Length = 163 Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats. Identities = 61/148 (41%), Positives = 86/148 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM+ AL EA+ A E+P+GAV V +II+R N +++ TAHAEILAI Sbjct: 7 SEKKFFMNEALTEAKKAEKLGEVPIGAVVVYQKQIIARGYNLREKIQKATAHAEILAINE 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C L+ L E L+VTLEPC+MC+ A+ LARI +YYGA +PKGG + Sbjct: 67 ACTFLNSWRLEETRLFVTLEPCSMCSGAMLLARIPEVYYGAKDPKGGAAGTLINLLADSR 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ QI+ +FFK+ R Sbjct: 127 FNHVAKTESGVLEEPCSQILTNFFKQLR 154 >gi|24378807|ref|NP_720762.1| putative deaminase [Streptococcus mutans UA159] gi|24376681|gb|AAN58068.1|AE014879_5 putative deaminase [Streptococcus mutans UA159] Length = 156 Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats. Identities = 58/145 (40%), Positives = 78/145 (53%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL+EAQ + + EIP+G V V + +II N E HAEI+AI R Sbjct: 10 EFFMGEALKEAQLSLQKEEIPIGCVIVKDGQIIGCGHNAREEENLAIMHAEIMAINQANR 69 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + L+VT+EPC MC+ AI LARI ++ YGA N K GG + T +H Sbjct: 70 TQESWRLLDCTLFVTIEPCIMCSGAIGLARIPQVIYGAKNAKFGGAGSLYDILTDERLNH 129 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ GI E+ Q++Q FF+ RR Sbjct: 130 RVEVERGILEKECAQMMQSFFRYRR 154 >gi|312279157|gb|ADQ63814.1| Cytidine/deoxycytidylate deaminase family protein, putative [Streptococcus thermophilus ND03] Length = 172 Score = 212 bits (542), Expect = 9e-54, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 85/148 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +FMS AL+EAQ + + EIP+G V V + +I+ R N EL HAE++AI+ Sbjct: 7 EEKEIFMSEALKEAQKSLDKAEIPIGCVIVKDKEIVGRGHNAREELNQAIMHAEVMAIQE 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + L + L+VT+EPC MC+ AI LARI ++ YGA N K GG + Sbjct: 67 ANRTVGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDER 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E +I+QDFF++ R Sbjct: 127 LNHRVEVETGVMEADCAKIMQDFFRQSR 154 >gi|16272843|ref|NP_439066.1| hypothetical protein HI0906 [Haemophilus influenzae Rd KW20] gi|260579996|ref|ZP_05847826.1| ComE operon protein 2 [Haemophilus influenzae RdAW] gi|1175980|sp|P44931|TADA_HAEIN RecName: Full=tRNA-specific adenosine deaminase gi|1573925|gb|AAC22565.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] gi|260093280|gb|EEW77213.1| ComE operon protein 2 [Haemophilus influenzae RdAW] Length = 173 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 61/147 (41%), Positives = 82/147 (55%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMG 62 M ALE A A EIPVGAV V + + II N + D TAHAEI+A+R G Sbjct: 11 DEKMMRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNG 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L LYVTLEPCTMCA AI +RI+RL +GAS+ K G I + F+ Sbjct: 71 AKNIQNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKM 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ E+ G+ + Q + FF++RR Sbjct: 131 NHTLEVTSGVLAEECSQKLSTFFQKRR 157 >gi|89053709|ref|YP_509160.1| CMP/dCMP deaminase, zinc-binding [Jannaschia sp. CCS1] gi|88863258|gb|ABD54135.1| CMP/dCMP deaminase zinc-binding protein [Jannaschia sp. CCS1] Length = 142 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 79/142 (55%), Positives = 96/142 (67%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL++A+ AA R E+PVGAV N +II+RAGNR RE D T HAEILAIR C L Sbjct: 1 MEAALDQARQAAARGEVPVGAVISRNGEIIARAGNRTREDHDPTGHAEILAIRSACAALQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E LP DL+VTLEPC CAA IS ARIRRLYY A +PK GGI G + +T HH PE Sbjct: 61 SERLPGCDLWVTLEPCPACAATISAARIRRLYYAAPDPKSGGIAQGPRIFTHPQAHHVPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IY G+ E+ + +++DFF +R Sbjct: 121 IYTGLLEEEAATLLRDFFAGKR 142 >gi|117617810|ref|YP_857319.1| tRNA-specific adenosine deaminase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559217|gb|ABK36165.1| tRNA-specific adenosine deaminase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 179 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 76/148 (51%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A+ A A EIPVGAV VL +++ NR+ D AHAE++AIR Sbjct: 14 EQDERWMRHAMALAARAEGIGEIPVGAVLVLGGEVVGEGWNRSISEHDACAHAEVMAIRA 73 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L + LYVTLEPC MCA A+ +R++R+ YGA + K G + + Sbjct: 74 AGVRLQNYRLLDTTLYVTLEPCCMCAGALIHSRVKRVVYGARDLKTGAAGSVFEILQDPR 133 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + DFF+ RR Sbjct: 134 HNHGVELTGGVLADACSAQLSDFFRRRR 161 >gi|146308436|ref|YP_001188901.1| CMP/dCMP deaminase, zinc-binding [Pseudomonas mendocina ymp] gi|145576637|gb|ABP86169.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina ymp] Length = 158 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 83/148 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL +A+ A + E+PVGAV V + +++ + N D +AHAE++AIR Sbjct: 10 SRDEHFMRLALVQARLGAEQGEVPVGAVLVQDGEVVGQGFNCPILRHDPSAHAEMVAIRA 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + LP LYVTLEPC+MCA I ARI R+ Y AS P+ G + QF+ Sbjct: 70 AAQSVQNYRLPGSTLYVTLEPCSMCAGLIVHARIARVVYAASEPRAGVAISQGQFFDQGF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + S +++DFFK RR Sbjct: 130 LNHRVLVEGGLLAEESGALLKDFFKARR 157 >gi|326553676|gb|ADZ88315.1| cytidine and deoxycytidylate deaminase family protein [Brucella melitensis M5-90] Length = 142 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 93/142 (65%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A R E+P+GAV V + +II+RAGNR RE DVTAHAEIL IR +L Sbjct: 1 MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT TCHH+PE Sbjct: 61 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQLTCHHAPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IYPG E +R+I++DFF+E+R Sbjct: 121 IYPGFCEADARKILKDFFREKR 142 >gi|322514212|ref|ZP_08067274.1| tRNA-specific adenosine deaminase [Actinobacillus ureae ATCC 25976] gi|322119905|gb|EFX91914.1| tRNA-specific adenosine deaminase [Actinobacillus ureae ATCC 25976] Length = 196 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 81/148 (54%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL A A +EIPVGAV + + II N+ +L D +AHAE+LAIR Sbjct: 39 QDIHFMQYALALADRAEAIDEIPVGAVLIDSDGNIIGEGWNQVIQLADPSAHAEMLAIRQ 98 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 ++ + L LYVTLEPCTMCA AI +R+ RL +GAS+ K G I + + Sbjct: 99 AGKVQNNYRLLGCTLYVTLEPCTMCAGAILHSRLHRLVFGASDYKTGAIGSRFHLFEDYK 158 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + Q I FF+ RR Sbjct: 159 MNHFLEIRGGVLAEDCSQKISRFFQRRR 186 >gi|254442522|ref|ZP_05055998.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Verrucomicrobiae bacterium DG1235] gi|198256830|gb|EDY81138.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Verrucomicrobiae bacterium DG1235] Length = 177 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 77/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M A +A A NE+P+GAV +++ A NR D TAHAE+LAI Sbjct: 23 RNDRYYMELAYNQAIEAWRENEVPIGAVIEYKGEVVGSAHNRVESTNDPTAHAEMLAITQ 82 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L E LYVT EPC MC+ A ++R++R+ Y +PK GG+ + T Sbjct: 83 ASSAIKNWRLNEATLYVTKEPCPMCSGASMMSRLKRVVYAVPDPKMGGLGGLYDVNSYPT 142 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +HS E+ G+ +++Q FF+ +R Sbjct: 143 INHSLEVEIGVLRDDCLELLQAFFQLKR 170 >gi|110833682|ref|YP_692541.1| cytidine/deoxycytidylate deaminase family protein [Alcanivorax borkumensis SK2] gi|110646793|emb|CAL16269.1| cytidine/deoxycytidylate deaminase family protein [Alcanivorax borkumensis SK2] Length = 152 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 81/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ AA + E+PVGA+ V +++ + N+ D +AHAEI+A+R Sbjct: 2 DDQDWMQQALMLARQAADQGEVPVGALVVRGGQLLGQGYNQPITANDPSAHAEIIAMRSA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L LYVTLEPCTMC A+ ARI RL YGAS P+ G E+ Q ++ Sbjct: 62 SLAEKNYRLSGCTLYVTLEPCTMCFGAMVHARIGRLVYGASEPRAGVCESQLQLPSVDFY 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + S +++ FF +RR Sbjct: 122 NHRVEVEKGVLAEESAMLLKRFFADRR 148 >gi|317503805|ref|ZP_07961817.1| cytosine deaminase [Prevotella salivae DSM 15606] gi|315665102|gb|EFV04757.1| cytosine deaminase [Prevotella salivae DSM 15606] Length = 148 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 71/148 (47%), Positives = 89/148 (60%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM AL EAQ AA EIP+GAV V N++IISRA N +L DVTAHAE+ AI Sbjct: 6 DKDEQFMRKALYEAQRAAEEGEIPIGAVIVCNDRIISRAHNLTEKLHDVTAHAEMQAITA 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 +L + L + LYVT+EPC MCA AI A+I R+ YGAS+ K G QFY Sbjct: 66 AADLLGGKYLSDCTLYVTVEPCVMCAGAIGWAQIGRIVYGASDEKRG-----YQFYAPRA 120 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E RQ++QDFFK++R Sbjct: 121 LHPKAVVTRGVLEAECRQMMQDFFKQKR 148 >gi|304393183|ref|ZP_07375111.1| tRNA-specific adenosine deaminase [Ahrensia sp. R2A130] gi|303294190|gb|EFL88562.1| tRNA-specific adenosine deaminase [Ahrensia sp. R2A130] Length = 153 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 77/153 (50%), Positives = 103/153 (67%), Gaps = 4/153 (2%) Query: 1 MKKGNV----FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M K N FM AL EA+ AA R E+PVGAV V + +++++AGNR EL D +AHAE+ Sbjct: 1 MTKDNYDVASFMEQALVEARAAAERGEVPVGAVLVRDGEVVAKAGNRTLELHDPSAHAEL 60 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L IR C + LP+ DLYVTLEPCT+CA AIS ARIRR+Y+ A + KGG + NG +F Sbjct: 61 LVIRQACAAAKSQRLPDCDLYVTLEPCTLCATAISFARIRRVYFAADDAKGGAVTNGVRF 120 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + TCHH PE+Y G+ E + ++++ FF RR Sbjct: 121 FDQPTCHHEPEVYSGMCEVEAGELLRSFFAARR 153 >gi|153010358|ref|YP_001371572.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum anthropi ATCC 49188] gi|151562246|gb|ABS15743.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum anthropi ATCC 49188] Length = 173 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 89/142 (62%), Positives = 107/142 (75%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EA+ A R E+P+GAV V II+RAGNR RE DVTAHAE+LAIR + L Sbjct: 32 MEIALAEARAAGSRGEVPIGAVIVHQGTIIARAGNRTREFNDVTAHAEVLAIREAGKALQ 91 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPC MCA AIS ARIRRLYYGAS+PKGGG+E+G +FYT TCHH PE Sbjct: 92 SERLVDCDLYVTLEPCAMCATAISFARIRRLYYGASDPKGGGVEHGPRFYTQPTCHHVPE 151 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IY G SE S++I++DFF+++R Sbjct: 152 IYAGFSEGDSQKILRDFFRDKR 173 >gi|290581189|ref|YP_003485581.1| putative deaminase [Streptococcus mutans NN2025] gi|254998088|dbj|BAH88689.1| putative deaminase [Streptococcus mutans NN2025] Length = 156 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM AL+EAQ + + EIP+G V V + +II N E HAEI+AI Sbjct: 8 EKEFFMGEALKEAQLSLQKEEIPIGCVIVKDGQIIGCGHNAREEENLAIMHAEIMAINQA 67 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L + L+VT+EPC MC+ AI LARI ++ YGA N K GG + T Sbjct: 68 NRTQESWRLLDCTLFVTIEPCIMCSGAIGLARIPQVIYGAKNAKFGGAGSLYDILTDERL 127 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E+ Q++Q FF+ RR Sbjct: 128 NHRVEVERGILEKECAQMMQSFFRYRR 154 >gi|170725917|ref|YP_001759943.1| zinc-binding CMP/dCMP deaminase [Shewanella woodyi ATCC 51908] gi|169811264|gb|ACA85848.1| CMP/dCMP deaminase zinc-binding [Shewanella woodyi ATCC 51908] Length = 169 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A++ A A + E+PVGA+ V N+++IS N D +AHAE+ +R Sbjct: 5 ERDIHYMKLAMDMAAKAEEKGEVPVGAILVKNDEVISAGFNFCIGSHDPSAHAEMQCLRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 +++ L + LYVTLEPC MCA A+ +R+ RL +GAS+ K G + Sbjct: 65 AGKVIENYRLLDTTLYVTLEPCAMCAGAMVHSRVSRLVFGASDAKTGAAGTVIDLVRHSA 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E + + FF+ RR Sbjct: 125 FNHQLEVTQGVLELECAEQLSQFFRRRR 152 >gi|124266938|ref|YP_001020942.1| tRNA-adenosine deaminase [Methylibium petroleiphilum PM1] gi|124259713|gb|ABM94707.1| tRNA-adenosine deaminase [Methylibium petroleiphilum PM1] Length = 205 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 4/148 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL--NN--KIISRAGNRNRELKDVTAHAEIL 57 +K M AL++AQNA L E+PVGAV V + ++++ NR D TAHAEI+ Sbjct: 9 RKDEAAMRLALDQAQNAWLVGEVPVGAVIVREVDGVHQVVATGYNRPITTHDPTAHAEIV 68 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 A+R ++L LP+ +LYVTLEPC MCA A+ AR +R+ Y A++PK G + + Sbjct: 69 ALRHAAQLLGNYRLPDCELYVTLEPCAMCAMALVHARFKRVVYAAADPKTGAAGSVIDLF 128 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 +H + G+ Q++++FF Sbjct: 129 AQRQLNHHTAVQGGVLADTCGQLLREFF 156 >gi|283477539|emb|CAY73455.1| tRNA-specific adenosine deaminase [Erwinia pyrifoliae DSM 12163] Length = 157 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 54/142 (38%), Positives = 77/142 (54%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ A E+PVGAV VL+ + I NR D TAHAE++A+R G +++ Sbjct: 1 MRHALRLARRAWDEGEVPVGAVLVLDGQAIGEGWNRPIGQHDPTAHAEMMALRQGGKVIE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ R+ RL YGA + K G + A +H + Sbjct: 61 NYRLLDTTLYVTLEPCVMCAGAMIHGRVGRLVYGARDAKTGAAGSLLDVLGHAGMNHHVQ 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ ++ DFF++RR Sbjct: 121 VDCGVLRDECAAMLSDFFRQRR 142 >gi|306826204|ref|ZP_07459538.1| tRNA-specific adenosine deaminase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431480|gb|EFM34462.1| tRNA-specific adenosine deaminase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 155 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 6 EEKEAFMREALREAEIALEHDEIPIGCVIVKDREIIGRGHNAREELQRAVMHAEIMAIEN 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L+VT+EPC MC+ AI LARI + YGA N K G + T Sbjct: 66 ANVSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDER 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF+ RR Sbjct: 126 LNHRVEVETGILEDDCAAIMQDFFRNRR 153 >gi|221133296|ref|ZP_03559601.1| CMP/dCMP deaminase, zinc-binding protein [Glaciecola sp. HTCC2999] Length = 175 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ ++M+ AL A A E+PVGAV VL+N+II NR+ D HAEI+AI+ Sbjct: 7 MEQDELWMTHALSLADKAQQTGEVPVGAVIVLDNQIIGEGYNRSIINHDPCGHAEIMAIQ 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + ++ + + +YVTLEPC MCA AI AR++R+ +GAS+ K G + Sbjct: 67 SAAQHINNYRILDATMYVTLEPCAMCAGAIVHARMKRVVFGASDLKTGCAGSILNLLQHD 126 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + I FFK+RR Sbjct: 127 KLNHQVELQRGVLSELCSAKISQFFKDRR 155 >gi|160947058|ref|ZP_02094225.1| hypothetical protein PEPMIC_00989 [Parvimonas micra ATCC 33270] gi|158446192|gb|EDP23187.1| hypothetical protein PEPMIC_00989 [Parvimonas micra ATCC 33270] Length = 155 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM AL+EA+ A + E+P+G V V ++KI+SR N+ K HAEI+AI Sbjct: 1 MSRDEYFMDIALKEAKKAYNKGEVPIGCVIVKDDKIVSRGHNQVLSKKSGVNHAEIIAIN 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + +L+VTLEPC MCA AI +RI+R+ GA + K G + Sbjct: 61 KAGQKLGDFRLEDTELFVTLEPCCMCAGAIVNSRIKRVIIGAMDVKRGFCGSIENVLDRQ 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ EQ+ I+QDFFK R Sbjct: 121 ELNHRSIIKTGVLEQKCLDILQDFFKNLR 149 >gi|119897879|ref|YP_933092.1| cytidine deaminase [Azoarcus sp. BH72] gi|119670292|emb|CAL94205.1| cytidine deaminase [Azoarcus sp. BH72] Length = 154 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K +FM ALE+A A +E+PVGAV V +I+ R N+ D TAHAE++A+R Sbjct: 2 KDEMFMRAALEQAHLAGACDEVPVGAVVVCEGEIVGRGFNQPIGRHDPTAHAEVMALRDA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L LP +LYVTLEPC MC+ AI ARI R+ YGA +PK G + Y Sbjct: 62 AARLGNYRLPGCELYVTLEPCVMCSGAIMHARIARVVYGARDPKTGVAGSVIDLYAEGRL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ + ++ FF RR Sbjct: 122 NHHASIEGGLLAEECGGLLSSFFAARR 148 >gi|91225086|ref|ZP_01260308.1| YfhC protein [Vibrio alginolyticus 12G01] gi|91190029|gb|EAS76300.1| YfhC protein [Vibrio alginolyticus 12G01] Length = 169 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 54/142 (38%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+E A+ A E+PVGAV V + +II+ NR+ D TAHAEI +R + L Sbjct: 1 MRRAMELAEQAEAEGEVPVGAVLVKDGEIIAEGRNRSIGTHDATAHAEIQTLRKAGQKLE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +R++R+ +GA + K G + +H Sbjct: 61 NYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAAYHYAL 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ E R +Q FFK RR Sbjct: 121 VEKGLLEDECRTQLQAFFKRRR 142 >gi|171058718|ref|YP_001791067.1| CMP/dCMP deaminase zinc-binding [Leptothrix cholodnii SP-6] gi|170776163|gb|ACB34302.1| CMP/dCMP deaminase zinc-binding [Leptothrix cholodnii SP-6] Length = 231 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 56/152 (36%), Positives = 87/152 (57%), Gaps = 4/152 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL---NN-KIISRAGNRNRELKDVTAHAEIL 57 + M AL++A NA L E+PVGAV V + ++I+ NR D TAHAE++ Sbjct: 9 SRDENTMRLALDQALNAHLAGEVPVGAVIVRHTADGPQVIATGYNRPVTTNDPTAHAELV 68 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 A+R +L LP+ ++Y+TLEPC MCA A+ AR+RR+ +GA +PK G + + Sbjct: 69 ALRHAATLLENYRLPDCEIYITLEPCAMCAMALLHARLRRVVFGAWDPKTGAAGSVVNLF 128 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 L +H E+ G+ +++++FF ERR Sbjct: 129 DLPQLNHQTEVQGGVLADSCGRVLREFFVERR 160 >gi|165975988|ref|YP_001651581.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149887|ref|YP_001968412.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307247548|ref|ZP_07529592.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307252128|ref|ZP_07534027.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256596|ref|ZP_07538377.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307261030|ref|ZP_07542712.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263211|ref|ZP_07544831.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|165876089|gb|ABY69137.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189915018|gb|ACE61270.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306855913|gb|EFM88072.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306860428|gb|EFM92442.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306865006|gb|EFM96908.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306869332|gb|EFN01127.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871428|gb|EFN03152.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 196 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 61/145 (42%), Positives = 79/145 (54%), Gaps = 1/145 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ FM ALE A A EIPVGAV V II N+ +L D +AHAE+LAIR Sbjct: 38 EQDIHFMRYALELADRAEAIGEIPVGAVLVDQEGNIIGEGWNQVIQLSDPSAHAEMLAIR 97 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L + LYVTLEPCTMCA AI +R+RRL +GAS+ K G I + + Sbjct: 98 QAGKVQRNYRLLDCTLYVTLEPCTMCAGAILHSRLRRLVFGASDYKTGAIGSRFHLFEDY 157 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +H EI G+ + Q I FF Sbjct: 158 KMNHFLEIRGGVLAEECSQKISRFF 182 >gi|227877638|ref|ZP_03995691.1| nucleoside deaminase [Lactobacillus crispatus JV-V01] gi|227862786|gb|EEJ70252.1| nucleoside deaminase [Lactobacillus crispatus JV-V01] Length = 185 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 50/149 (33%), Positives = 85/149 (57%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A+++A+ A + E+P+GAV V + +++ NR +D T HAE++AI+ Sbjct: 24 EDKRKYMQLAIDQAKEAEKQGEVPIGAVVVDPDGRVVGTGYNRRELDEDATQHAEMIAIK 83 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + +++ Sbjct: 84 EACSKLGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFSVE 143 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P G+ + Q+++DFF+ R Sbjct: 144 KFNHHPHAIRGLYRDQCAQMLKDFFRAIR 172 >gi|87198248|ref|YP_495505.1| tRNA-adenosine deaminase [Novosphingobium aromaticivorans DSM 12444] gi|87133929|gb|ABD24671.1| tRNA-adenosine deaminase [Novosphingobium aromaticivorans DSM 12444] Length = 151 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 71/142 (50%), Positives = 99/142 (69%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+EA AA E+P+GAV V + K+++ A NR R L+D TAHAE+LAIR L Sbjct: 10 MRLALDEALRAADEGEVPIGAVVVKDGKVVAAAHNRPRTLRDPTAHAEMLAIRAAAAQLG 69 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 QE L DL+V+LEPC MCA AI+ ARI R+YY AS+PKGG +E+G++ + TC H PE Sbjct: 70 QERLEGCDLWVSLEPCAMCAGAIAHARIARVYYAASDPKGGAVEHGSRVFDQPTCLHRPE 129 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G+ E + ++++ FF++RR Sbjct: 130 VYSGMGEAEAAEMLRTFFRDRR 151 >gi|222085014|ref|YP_002543543.1| cytosine deaminase protein [Agrobacterium radiobacter K84] gi|221722462|gb|ACM25618.1| cytosine deaminase protein [Agrobacterium radiobacter K84] Length = 152 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 92/149 (61%), Positives = 115/149 (77%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M N FM AL EA++A R E+P+GAV VL+N +I++AGNR REL DVTAHAEI AIR Sbjct: 1 MANTNHFMKLALAEARSAGARGEVPIGAVLVLDNAVIAKAGNRTRELNDVTAHAEIAAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + C L QE L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGGG++NG +FY Sbjct: 61 IACEALGQERLTGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGGVDNGVRFYRQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCHH+PE+Y GI+E+ + I+++FF+ +R Sbjct: 121 TCHHAPEVYSGIAERDAADILREFFQLKR 149 >gi|295694717|ref|YP_003587955.1| CMP/dCMP deaminase zinc-binding protein [Bacillus tusciae DSM 2912] gi|295410319|gb|ADG04811.1| CMP/dCMP deaminase zinc-binding protein [Bacillus tusciae DSM 2912] Length = 174 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 1/147 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL+ A A E+P+GAV V KI+ N D TAHAE++A+R Sbjct: 6 RDLQYMERALQLAAYAGEMGEVPIGAVVVAGGKILGEGCNLREMWNDPTAHAEMVALRQA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L LYVTLEPC MC A LAR+ R+ +GA +PK G + Q A Sbjct: 66 AQAVGGWRLSGTTLYVTLEPCAMCVGAAVLARVERVVFGAPDPKAGACGSVLQV-ADAPL 124 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ +Q +++ FF+E R Sbjct: 125 NHRLKVEGGVLQQSCSHLLKQFFRELR 151 >gi|218247490|ref|YP_002372861.1| CMP/dCMP deaminase [Cyanothece sp. PCC 8801] gi|257061174|ref|YP_003139062.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8802] gi|218167968|gb|ACK66705.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8801] gi|256591340|gb|ACV02227.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8802] Length = 154 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 77/147 (52%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL +A+ A E+PVGA+ V +++ GNR +D TAHAE+LAIR Sbjct: 7 HRYWMEKALNQAKLAGEIGEVPVGAIIVDHQGNLLAETGNRKETNQDPTAHAEMLAIRQA 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L LYVTLEPC MC A+ +R+ L YG PK G I A Sbjct: 67 SQRLQTWHLNNCTLYVTLEPCPMCTGALIQSRLGLLVYGCDEPKSGTIRTVMNLPDSACS 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E+ RQ +Q +F+ERR Sbjct: 127 NHRLAVISGILEEECRQQLQQWFRERR 153 >gi|22536583|ref|NP_687434.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae 2603V/R] gi|25010509|ref|NP_734904.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae NEM316] gi|76788440|ref|YP_329120.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae A909] gi|77408782|ref|ZP_00785512.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae COH1] gi|77412323|ref|ZP_00788636.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae CJB111] gi|77413967|ref|ZP_00790141.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae 515] gi|22533418|gb|AAM99306.1|AE014209_19 cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae 2603V/R] gi|23094862|emb|CAD46080.1| Unknown [Streptococcus agalactiae NEM316] gi|76563497|gb|ABA46081.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae A909] gi|77160003|gb|EAO71140.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae 515] gi|77161612|gb|EAO72610.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae CJB111] gi|77172627|gb|EAO75766.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae COH1] gi|319744400|gb|EFV96759.1| cytidine/deoxycytidylate deaminase [Streptococcus agalactiae ATCC 13813] Length = 168 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM+ AL+EA+++ + EIP+G V V + II R N E HAEI+AI Sbjct: 7 EEKEWFMTEALKEAKSSLEKEEIPIGCVIVKDGHIIGRGHNAREEFNKAILHAEIMAINN 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L + L+VT+EPC MC+ AI LARI + YGA N K G + + + Sbjct: 67 ANEKVGNWRLLDTTLFVTVEPCVMCSGAIGLARIPHVIYGAKNTKFGAAGSLYDILSDSR 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E + +I+QDFF++ R Sbjct: 127 LNHRVEVETGILEDQCAKIMQDFFRKGR 154 >gi|260581733|ref|ZP_05849530.1| ComE operon protein 2 [Haemophilus influenzae NT127] gi|319897607|ref|YP_004135804.1| tRNA-specific adenosine deaminase [Haemophilus influenzae F3031] gi|260095326|gb|EEW79217.1| ComE operon protein 2 [Haemophilus influenzae NT127] gi|317433113|emb|CBY81487.1| tRNA-specific adenosine deaminase [Haemophilus influenzae F3031] Length = 173 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 62/147 (42%), Positives = 82/147 (55%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMG 62 M ALE A A EIPVGAV V + + II N + D TAHAEI+A+R G Sbjct: 11 DEKMMRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNG 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L LYVTLEPCTMCA AI +RI+RL +GAS+ K G I + F+ Sbjct: 71 AKNIQNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKM 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ EI G+ + Q + FF++RR Sbjct: 131 NHTLEITSGVLAEECSQKLSTFFQKRR 157 >gi|330936949|gb|EGH41059.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. pisi str. 1704B] Length = 169 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL A AL E+PVGAV V N +II R N D +AHAE++AIR Sbjct: 10 SNDQYFMREALALASQGALLGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRD 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ A Sbjct: 70 AAKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 130 LNHRVLFEGGVLGEECGTMLSEFFRMRR 157 >gi|323143534|ref|ZP_08078213.1| cytidine and deoxycytidylate deaminase zinc-binding region [Succinatimonas hippei YIT 12066] gi|322416695|gb|EFY07350.1| cytidine and deoxycytidylate deaminase zinc-binding region [Succinatimonas hippei YIT 12066] Length = 175 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FMS AL +A++A EIPVGAV V +I+S NR D AHAEI+A+R Sbjct: 5 NDEYFMSLALSQARHAWDLGEIPVGAVIVNAAKEIVSVGCNRTIIDNDPCAHAEIVALRN 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 +IL L ++ +YVTLEPC MC+ A+ AR++RL YGA +PK G + + Sbjct: 65 AGKILDTYRLTDLTMYVTLEPCCMCSGALIHARLKRLVYGAKDPKTGACGSVFDILIDSR 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ E +++ FFK RR Sbjct: 125 HNHKIDVEGGVLESSCSDLLKSFFKMRR 152 >gi|55821816|ref|YP_140258.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus thermophilus LMG 18311] gi|55737801|gb|AAV61443.1| cytidine/deoxycytidylate deaminase family protein, putative [Streptococcus thermophilus LMG 18311] Length = 172 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 85/148 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +FMS AL+EAQ + + EIP+G V V + +I+ R N EL HAE++AI+ Sbjct: 7 EEKEIFMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAEVMAIQE 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + L + L+VT+EPC MC+ AI LARI ++ YGA N K GG + Sbjct: 67 ANRTVGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDDR 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E +I+QDFF++ R Sbjct: 127 LNHRVEVETGVMEADCAKIMQDFFRQSR 154 >gi|317496201|ref|ZP_07954561.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Gemella moribillum M424] gi|316913776|gb|EFV35262.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Gemella moribillum M424] Length = 153 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 83/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK N +M ALEEA+ A + E+PVGAV V++++++++A N + V HAE+L I+ Sbjct: 1 MKDHNYYMEMALEEARRAYQKGEVPVGAVLVIDDEVVAKAHNTREASQQVLNHAEMLVIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C + L LY T+EPC MC+ AI AR+ + YGA++ K G + Sbjct: 61 EACEKIGFWRLDNSYLYTTVEPCVMCSGAIVQARVENVIYGAADVKYGCCGSCIDLVANN 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ E+ +++DFF+E R Sbjct: 121 KFNHQAHIISGVLEEECAALMKDFFRELR 149 >gi|306834459|ref|ZP_07467572.1| tRNA-specific adenosine deaminase [Streptococcus bovis ATCC 700338] gi|304423261|gb|EFM26414.1| tRNA-specific adenosine deaminase [Streptococcus bovis ATCC 700338] Length = 168 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL+EAQ + + EIP+G V V N II R N E + HAEI+AI Sbjct: 7 EEKEYFMREALKEAQKSLAKEEIPIGCVIVKNGDIIGRGHNAREERQKAILHAEIMAIDD 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L+VT+EPC MC+ AI LARI ++ YGA+N K GG + T Sbjct: 67 ANENEGNWRLLDSTLFVTIEPCVMCSGAIGLARIPQVIYGAANQKFGGAGSLYDILTDVR 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF++ R Sbjct: 127 LNHRVEVETGILETECAAIMQDFFRKNR 154 >gi|161869845|ref|YP_001599014.1| cytidine and deoxycytidylate deaminase family protein [Neisseria meningitidis 053442] gi|161595398|gb|ABX73058.1| cytidine and deoxycytidylate deaminase family protein [Neisseria meningitidis 053442] Length = 239 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 90 EEMEHFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 149 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + Sbjct: 150 AGREIQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 209 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + I GI ++ R ++ FF+ +R Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237 >gi|331003430|ref|ZP_08326929.1| hypothetical protein HMPREF0491_01791 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412476|gb|EGG91865.1| hypothetical protein HMPREF0491_01791 [Lachnospiraceae oral taxon 107 str. F0167] Length = 155 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 52/151 (34%), Positives = 79/151 (52%), Gaps = 2/151 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + N F+ A+++A+ A ++P+G V V +KII+R NR + K +HAEI+AI+ Sbjct: 1 MDRDNYFLKEAVKQAKKAGEIGDVPIGCVIVFEDKIIARGYNRRNKDKSTLSHAEIIAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ + L + +Y+TLEPC MCA AI +RI+R+ GA NPK G + Sbjct: 61 KACKKIGDWRLEDCTMYITLEPCPMCAGAIIQSRIKRVVLGAMNPKAGCAGSIINILQTE 120 Query: 121 TCHHSPEI--YPGISEQRSRQIIQDFFKERR 149 +H EI ++ FFK R Sbjct: 121 GFNHKTEISLIDEPLHSECVSLLTSFFKALR 151 >gi|326624390|gb|EGE30735.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 161 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 55/142 (38%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G +L Sbjct: 1 MRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVLQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +RI R+ +GA + K G + +H + Sbjct: 61 NYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRVD 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I G+ ++ DFF+ RR Sbjct: 121 IIEGVLRDECATLLSDFFRMRR 142 >gi|328952357|ref|YP_004369691.1| CMP/dCMP deaminase zinc-binding protein [Desulfobacca acetoxidans DSM 11109] gi|328452681|gb|AEB08510.1| CMP/dCMP deaminase zinc-binding protein [Desulfobacca acetoxidans DSM 11109] Length = 167 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 82/147 (55%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A+ EA+ A+ E+PVGAV + KII + N+ D +AHAEI+A+R Sbjct: 20 DQAYMCLAIGEAKKASSLQEVPVGAVVIDKAGKIIGQGHNQPIASHDPSAHAEIVALRQA 79 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 LP+ +YVTLEPC MC A+ AR+RRL YGA +PKGG + + Sbjct: 80 SACSRNYRLPDCTMYVTLEPCIMCIGAVLQARLRRLVYGADDPKGGACVSLYRLPEDTRL 139 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E R ++Q+FF+ RR Sbjct: 140 NHRLEVVRGVCEAECRTLLQEFFRRRR 166 >gi|68249492|ref|YP_248604.1| hypothetical protein NTHI1073 [Haemophilus influenzae 86-028NP] gi|145636963|ref|ZP_01792627.1| preprotein translocase subunit SecA [Haemophilus influenzae PittHH] gi|145638273|ref|ZP_01793883.1| preprotein translocase subunit SecA [Haemophilus influenzae PittII] gi|68057691|gb|AAX87944.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP] gi|145269821|gb|EDK09760.1| preprotein translocase subunit SecA [Haemophilus influenzae PittHH] gi|145272602|gb|EDK12509.1| preprotein translocase subunit SecA [Haemophilus influenzae PittII] gi|309751427|gb|ADO81411.1| tRNA-specific adenosine deaminase [Haemophilus influenzae R2866] gi|309973597|gb|ADO96798.1| tRNA-specific adenosine deaminase [Haemophilus influenzae R2846] Length = 173 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 62/147 (42%), Positives = 82/147 (55%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMG 62 M ALE A A EIPVGAV V + + II N + D TAHAEI+A+R G Sbjct: 11 DEKMMRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNG 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L LYVTLEPCTMCA AI +RI+RL +GAS+ K G I + F+ Sbjct: 71 AKNIQNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKM 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ EI G+ + Q + FF++RR Sbjct: 131 NHTLEITSGVLAEECSQKLSTFFQKRR 157 >gi|167749860|ref|ZP_02421987.1| hypothetical protein EUBSIR_00828 [Eubacterium siraeum DSM 15702] gi|167657172|gb|EDS01302.1| hypothetical protein EUBSIR_00828 [Eubacterium siraeum DSM 15702] Length = 150 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 2/150 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M +M+ +E A+ AA + E PVGA+ V + +II N + TAHAEI+AI Sbjct: 1 MTADEEYMTLCIELAKKAAEKGECPVGAIVVDKDGRIIGEGYNMREAEQMPTAHAEIIAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + ++ L E LYVTLEPC MCA AI +RI+RL YGA + KGG + + + Sbjct: 61 EQAAKAMNSWRLTECTLYVTLEPCPMCAGAIINSRIKRLVYGAFDEKGGACASLMEIFDY 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P + + + +++ +FFK+ R Sbjct: 121 P-FNHRPMVRSRVLQDECAKLLTEFFKDLR 149 >gi|207723447|ref|YP_002253846.1| cytosine/adenosine deaminase protein [Ralstonia solanacearum MolK2] gi|206588648|emb|CAQ35611.1| cytosine/adenosine deaminase protein [Ralstonia solanacearum MolK2] Length = 194 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL +A+ A E+PVGAV V N+I+ N D +AHAE+ A+R Sbjct: 28 ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 87 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LPE +++VTLEPC MCA A+ AR+ R+ YGA +PK G + + Sbjct: 88 AAVTLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 147 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I + Q +++ FF ERR Sbjct: 148 LNHQTAILGSVLAQECGDMLRAFFAERR 175 >gi|163758411|ref|ZP_02165499.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Hoeflea phototrophica DFL-43] gi|162284700|gb|EDQ34983.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Hoeflea phototrophica DFL-43] Length = 148 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 85/143 (59%), Positives = 109/143 (76%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M ALEE + AA R E+PVGAV VL+ ++I+RAGNR REL DVTAHAEILAIR L Sbjct: 6 YMDLALEEGRQAAERGEVPVGAVIVLDGEVIARAGNRTRELNDVTAHAEILAIRQAAMQL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S E L DLYVTLEPCTMCAAAIS AR+RRLYY A + KGG + +G +F+ TCHH+P Sbjct: 66 SSERLIGADLYVTLEPCTMCAAAISFARLRRLYYAADDEKGGAVTSGVRFFDQPTCHHAP 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++YPG++ + ++++DFF+ERR Sbjct: 126 DVYPGLAASDAMRLLKDFFRERR 148 >gi|145632283|ref|ZP_01788018.1| hypothetical protein CGSHi3655_07509 [Haemophilus influenzae 3655] gi|145634073|ref|ZP_01789784.1| hypothetical protein CGSHiAA_08515 [Haemophilus influenzae PittAA] gi|229844039|ref|ZP_04464180.1| hypothetical protein CGSHi6P18H1_06366 [Haemophilus influenzae 6P18H1] gi|144987190|gb|EDJ93720.1| hypothetical protein CGSHi3655_07509 [Haemophilus influenzae 3655] gi|145268517|gb|EDK08510.1| hypothetical protein CGSHiAA_08515 [Haemophilus influenzae PittAA] gi|229813033|gb|EEP48721.1| hypothetical protein CGSHi6P18H1_06366 [Haemophilus influenzae 6P18H1] Length = 173 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 62/147 (42%), Positives = 82/147 (55%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMG 62 M ALE A A EIPVGAV V + + II N + D TAHAEI+A+R G Sbjct: 11 DEKMMRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNG 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L LYVTLEPCTMCA AI +RI+RL +GAS+ K G I + F+ Sbjct: 71 AKNIQNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFNDYKM 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ EI G+ + Q + FF++RR Sbjct: 131 NHTLEITSGVLAEECSQKLSTFFQKRR 157 >gi|163749537|ref|ZP_02156784.1| cytidine/deoxycytidylate deaminase family protein [Shewanella benthica KT99] gi|161330647|gb|EDQ01584.1| cytidine/deoxycytidylate deaminase family protein [Shewanella benthica KT99] Length = 189 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 49/146 (33%), Positives = 73/146 (50%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FMS A+E A+ A E+PVGAV + + +++S N L D +AHAE+ +R Sbjct: 22 DKHFMSMAMEMARKAEAVGEVPVGAVLIKDGELVSAGFNYCIGLHDPSAHAEMQCLRQAG 81 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 +++ L LYVTLEPC MCA A+ +RI RL +GA + K G + Sbjct: 82 KVIENYRLLNTTLYVTLEPCAMCAGAMVHSRIERLVFGAKDDKTGAAGTVIDLVRHPAFN 141 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ + FF+ RR Sbjct: 142 HQLQVSDGVLADECSAQLSQFFRRRR 167 >gi|302379537|ref|ZP_07268022.1| cytidine and deoxycytidylate deaminase zinc-binding region [Finegoldia magna ACS-171-V-Col3] gi|302312444|gb|EFK94440.1| cytidine and deoxycytidylate deaminase zinc-binding region [Finegoldia magna ACS-171-V-Col3] Length = 155 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 1/148 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM A+E+A+ A +E+PVG V V N +II++A N + T HAE+ AI Sbjct: 3 NNDEKFMIKAIEQAKIAFDLDEVPVGCVIVKNGEIIAQAYNSVETDNNATMHAELKAINQ 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 +++ L + +YVTLEPC MC A+ +RI ++ +GA + K G + Sbjct: 63 ATKVIGNFRLDDCTMYVTLEPCVMCTGALVYSRIPKVVFGAFDKKRGACGSLISLNDYEG 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ I E+ +++Q FF+ R Sbjct: 123 LNHKIEVKS-IMEKECVELMQSFFRRIR 149 >gi|300724136|ref|YP_003713453.1| TadA, tRNA -specific adenosine deaminase [Xenorhabdus nematophila ATCC 19061] gi|297630670|emb|CBJ91335.1| TadA, tRNA-specific adenosine deaminase [Xenorhabdus nematophila ATCC 19061] Length = 170 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M A+ A A + EIPVGA+ V +N+I++ N D TAHAEI+A+R G Sbjct: 12 RDEYWMRRAMALAMQAQAQGEIPVGAILVADNEILAEGFNLPITYHDPTAHAEIIALRQG 71 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L LYVTLEPC MCA A+ +RI+RL YGAS+ K G + Sbjct: 72 GSRLQNYRLLNTTLYVTLEPCVMCAGAMVHSRIKRLVYGASDMKTGAAGSLIDILRHPGM 131 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + ++ FFK+RR Sbjct: 132 NHQIEIIGGVLAEECSTMLSSFFKQRR 158 >gi|304383698|ref|ZP_07366157.1| tRNA-specific adenosine deaminase [Prevotella marshii DSM 16973] gi|304335222|gb|EFM01493.1| tRNA-specific adenosine deaminase [Prevotella marshii DSM 16973] Length = 160 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 64/148 (43%), Positives = 83/148 (56%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM AL EA+ A EIPVGA+ V +I+SRA N L DVTAHAE+ AI Sbjct: 18 KTDEAFMRKALAEAEMAFEEGEIPVGAIIVCKGRILSRAHNLTETLHDVTAHAEMQAITA 77 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L LYVT+EPC MCA A++ A++ R+ YGAS+ K G + Y Sbjct: 78 AADALGGKYLTGCTLYVTVEPCPMCAGALAWAQLSRIVYGASDTKRG-----YRLYAPDV 132 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI + R+++Q FFKERR Sbjct: 133 LHPKTEVMGGILAEECRELMQRFFKERR 160 >gi|77407016|ref|ZP_00784028.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae H36B] gi|77174376|gb|EAO77233.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae H36B] Length = 168 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL+EA+++ + EIP+G V V + II R N E HAEI+AI Sbjct: 7 EEKEWFMXEALKEAKSSLEKEEIPIGCVIVKDGHIIGRGHNAREEFNKAILHAEIMAINN 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L + L+VT+EPC MC+ AI LARI + YGA N K G + + + Sbjct: 67 ANEKVGNWRLLDTTLFVTVEPCVMCSGAIGLARIPHVIYGAKNTKFGAAGSLYDILSDSR 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E + +I+QDFF++ R Sbjct: 127 LNHRVEVETGILEDQCAKIMQDFFRKGR 154 >gi|300860777|ref|ZP_07106864.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TUSoD Ef11] gi|300849816|gb|EFK77566.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TUSoD Ef11] gi|315146059|gb|EFT90075.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX2141] Length = 173 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM A+ EA+ A E+P+GAV V +II R N ++ TAHAE+ AI+ Sbjct: 11 EEKEFFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQE 70 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 CR + L E L+VTLEPC MC+ A+ LARI +YYGA++PK G Sbjct: 71 ACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDER 130 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R ++ FFK+ R Sbjct: 131 FNHVAYVEAGVLEEECRLLLVQFFKKLR 158 >gi|116628523|ref|YP_821142.1| cytidine/deoxycytidylate deaminase family protein, putative [Streptococcus thermophilus LMD-9] gi|116101800|gb|ABJ66946.1| tRNA-adenosine deaminase [Streptococcus thermophilus LMD-9] Length = 172 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 85/148 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +FMS AL+EAQ + + EIP+G V V + +I+ R N EL HAE++AI+ Sbjct: 7 EEKEIFMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAEVMAIQE 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + L + L+VT+EPC MC+ AI LARI ++ YGA N K GG + Sbjct: 67 ANRTVGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDER 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E +I+QDFF++ R Sbjct: 127 LNHRVEVETGVMEADCAKIMQDFFRQSR 154 >gi|90422427|ref|YP_530797.1| CMP/dCMP deaminase, zinc-binding [Rhodopseudomonas palustris BisB18] gi|90104441|gb|ABD86478.1| tRNA-adenosine deaminase [Rhodopseudomonas palustris BisB18] Length = 148 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 80/143 (55%), Positives = 100/143 (69%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+ A+ A E+P+G V VLNN +I+ AGNR +D TAHAE+LAIR L Sbjct: 6 FMDLALKAAETAQNAGEVPIGCVIVLNNAVIASAGNRTLTDRDPTAHAEVLAIRQAAAAL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPCTMCA AIS ARIRRLYYGA++PKGG +E+G +F+ TCHH P Sbjct: 66 GSERLSGCDLYVTLEPCTMCAGAISFARIRRLYYGAADPKGGAVESGVRFFAQPTCHHVP 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y + E RS Q+++ FF+ RR Sbjct: 126 EVYSALGESRSAQMLRQFFQARR 148 >gi|315641449|ref|ZP_07896521.1| tRNA-specific adenosine deaminase [Enterococcus italicus DSM 15952] gi|315482737|gb|EFU73261.1| tRNA-specific adenosine deaminase [Enterococcus italicus DSM 15952] Length = 186 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM A+ EA+ A E+P+GAV VL +II R N +D T HAE++AIR Sbjct: 25 EEKAYFMCAAIGEAKKAQAIAEVPIGAVVVLEGEIIGRGHNLRETTQDATMHAEMIAIRE 84 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C + L + L+VTLEPC MC A L+R+ +Y+GA +PKGG + T Sbjct: 85 ACAKVGSWRLEDSQLFVTLEPCPMCGGAAMLSRVEEIYFGAYDPKGGATGSLLNLATDER 144 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI + +++ FFKE R Sbjct: 145 FNHWSYVEAGILQAECSDLLRTFFKELR 172 >gi|108758559|ref|YP_630178.1| cytidine and deoxycytidylate deaminase zinc-binding domain-containing protein [Myxococcus xanthus DK 1622] gi|108462439|gb|ABF87624.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein [Myxococcus xanthus DK 1622] Length = 154 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL A+ AA E+PVGAVAVLN +++ NR ++ AHAE+LA+ Sbjct: 2 SDEAFMQQALSLAREAAELGEVPVGAVAVLNGEVVGAGFNRREVDRNPLAHAEMLAMDAA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R + L V LYVTLEPC MCA + +R+ RL +GA +PK G + + Sbjct: 62 ARKIGAWRLSGVTLYVTLEPCAMCAGGLVQSRVTRLVFGAFDPKAGAVGSLYNLVEEPRH 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ GI SR +++ FF R Sbjct: 122 NHRLQVTSGILADESRLLLKTFFGRLR 148 >gi|227894597|ref|ZP_04012402.1| nucleoside deaminase [Lactobacillus ultunensis DSM 16047] gi|227863588|gb|EEJ71009.1| nucleoside deaminase [Lactobacillus ultunensis DSM 16047] Length = 174 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 85/149 (57%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+++A+ A + E+P+GAV V + K+I NR +D T HAE++AI+ Sbjct: 10 DDKKKYMQLAMDQAKIAEQQGEVPIGAVIVDPDGKVIGTGYNRRELDEDSTQHAEMIAIK 69 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + +T+ Sbjct: 70 EACKNLGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFTVD 129 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P G+ + Q+++DFF+ R Sbjct: 130 KFNHHPRAIRGLYRDQCAQMLKDFFRGIR 158 >gi|46143725|ref|ZP_00134574.2| COG0590: Cytosine/adenosine deaminases [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208056|ref|YP_001053281.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae L20] gi|126096848|gb|ABN73676.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 189 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 61/145 (42%), Positives = 79/145 (54%), Gaps = 1/145 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ FM ALE A A EIPVGAV V II N+ +L D +AHAE+LAIR Sbjct: 31 EQDIHFMRYALELADRAEAIGEIPVGAVLVDQEGNIIGEGWNQVIQLSDPSAHAEMLAIR 90 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L + LYVTLEPCTMCA AI +R+RRL +GAS+ K G I + + Sbjct: 91 QAGKVQRNYRLLDCTLYVTLEPCTMCAGAILHSRLRRLVFGASDYKTGAIGSRFHLFEDY 150 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +H EI G+ + Q I FF Sbjct: 151 KMNHFLEIRGGVLAEECSQKISRFF 175 >gi|303251559|ref|ZP_07337733.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303252205|ref|ZP_07338373.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302648988|gb|EFL79176.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302649557|gb|EFL79739.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 174 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 61/145 (42%), Positives = 79/145 (54%), Gaps = 1/145 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ FM ALE A A EIPVGAV V II N+ +L D +AHAE+LAIR Sbjct: 16 EQDIHFMRYALELADRAEAIGEIPVGAVLVDQEGNIIGEGWNQVIQLSDPSAHAEMLAIR 75 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L + LYVTLEPCTMCA AI +R+RRL +GAS+ K G I + + Sbjct: 76 QAGKVQRNYRLLDCTLYVTLEPCTMCAGAILHSRLRRLVFGASDYKTGAIGSRFHLFEDY 135 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +H EI G+ + Q I FF Sbjct: 136 KMNHFLEIRGGVLAEECSQKISRFF 160 >gi|166368572|ref|YP_001660845.1| cytidine and deoxycytidylate deaminase [Microcystis aeruginosa NIES-843] gi|166090945|dbj|BAG05653.1| cytidine and deoxycytidylate deaminase [Microcystis aeruginosa NIES-843] Length = 162 Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 82/149 (55%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 +K +M AL A A R ++PVGAV V +I++ N + D TAHAEILAIR Sbjct: 14 EKHRQWMQLALNLAATAGDRGDVPVGAVIVDKQGHLIAQGANCKEKHHDPTAHAEILAIR 73 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L + LYVTLEPC MCA AI AR+ L YGA +PK G I F Sbjct: 74 AASQVLGNWHLNDCTLYVTLEPCPMCAGAIIQARLGLLVYGADDPKTGVIRTVANFIDSP 133 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI + S +++Q +F+++R Sbjct: 134 FSNHRLPVIAGILAKESGELLQTWFEKKR 162 >gi|126662495|ref|ZP_01733494.1| putative cytosine/adenosine deaminase [Flavobacteria bacterium BAL38] gi|126625874|gb|EAZ96563.1| putative cytosine/adenosine deaminase [Flavobacteria bacterium BAL38] Length = 146 Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM AL+EA+ A + EIPVGAV V++NK+I+R N L DVTAHAE+ AI Sbjct: 6 TDDYFMKKALQEAETAFEKGEIPVGAVIVIDNKVIARTHNLTELLHDVTAHAEMQAITSA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L + LYVTLEPC MCA A+ ++I ++ +GAS+ G + GTQ Sbjct: 66 ANFLGGKYLKDCTLYVTLEPCQMCAGALYWSQISKIVFGASDENRGFQKMGTQL------ 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ E+ +++ FFK +R Sbjct: 120 HPKTQVISGVLEKECADLMKSFFKNKR 146 >gi|323492402|ref|ZP_08097552.1| tRNA-specific adenosine-34 deaminase [Vibrio brasiliensis LMG 20546] gi|323313363|gb|EGA66477.1| tRNA-specific adenosine-34 deaminase [Vibrio brasiliensis LMG 20546] Length = 181 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 52/143 (36%), Positives = 77/143 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +FM A+E AQ+A + E+PVGAV V + +II+ N + D TAHAE+ IR Sbjct: 9 QDELFMRRAMELAQHAEEQGEVPVGAVLVKDGEIIAEGWNESIGSHDATAHAEMQTIRKA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 69 GLALENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFEHQAA 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 +H ++ G+ E R +Q FF Sbjct: 129 YHYADVEQGLLEDECRVQLQSFF 151 >gi|269302803|gb|ACZ32903.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila pneumoniae LPCoLN] Length = 155 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+K FM A +EA+ A ++E+PVG V V ++KII+RA N +LKD TAHAEIL I Sbjct: 1 MEKDIFFMQQAFKEARKAYDQDEVPVGCVIVKDDKIIARAHNSVEKLKDATAHAEILCIG 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + LY TLEPC MCA AI LARI R+ + A + + G + +T Sbjct: 61 SAAQDLDNWRLLDTVLYCTLEPCLMCAGAIQLARIPRIVWAAPDVRLGAGGSWVNIFTEK 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H+ G+ + + +++ FF E+R Sbjct: 121 HPFHTVSCTGGVCSEEAEHLMKKFFVEKR 149 >gi|218780678|ref|YP_002431996.1| CMP/dCMP deaminase zinc-binding [Desulfatibacillum alkenivorans AK-01] gi|218762062|gb|ACL04528.1| CMP/dCMP deaminase zinc-binding [Desulfatibacillum alkenivorans AK-01] Length = 156 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 60/150 (40%), Positives = 90/150 (60%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59 M+K + +M AL+EA+ A +E+PVGAV VL ++ +I +A NR L D AHAEILA+ Sbjct: 1 MEKHSKYMQMALDEAKTAWDEDEVPVGAVLVLPDQDLIIKAHNRTIGLNDAAAHAEILAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R R++ L LY T+EPC MC A+ AR+ ++ +GA + K G + F + Sbjct: 61 REAGRVIGNYRLLNSVLYCTVEPCIMCMGAVIHARVSKVVFGAPDLKWGACGSLYDFASD 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PEI G+ E+ R I+Q+FF+ +R Sbjct: 121 PGLNHHPEIVSGVCEEACRTIMQEFFRLKR 150 >gi|148253230|ref|YP_001237815.1| tRNA-adenosine deaminase [Bradyrhizobium sp. BTAi1] gi|146405403|gb|ABQ33909.1| tRNA-adenosine deaminase [Bradyrhizobium sp. BTAi1] Length = 148 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 76/143 (53%), Positives = 105/143 (73%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+ A++AA+ E+P+G V V +N +I+ A NR +D TAHAEILA+R +++ Sbjct: 6 FMDLALKAAESAAISGEVPIGCVVVRDNAVIATAANRTLTDRDPTAHAEILALRQAAQVI 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L + DLYVTLEPCTMCA AIS ARIRRLYYGA++PKGG +E+G +F+ TCHH P Sbjct: 66 GSERLVDCDLYVTLEPCTMCAGAISFARIRRLYYGAADPKGGAVESGVRFFAAPTCHHVP 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y + EQ++ ++++ FFK RR Sbjct: 126 EVYSAVGEQQAAEMLKAFFKARR 148 >gi|282879130|ref|ZP_06287889.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella buccalis ATCC 35310] gi|281298772|gb|EFA91182.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella buccalis ATCC 35310] Length = 181 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K+ FM AL EA A E+P+GAV +II+RA N+ L DVTAHAE+LAI Sbjct: 39 KQDEQFMQKALAEAHAAYDEGEVPIGAVITCQGRIIARAHNQTETLNDVTAHAEMLAITA 98 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + LP+ LYVT+EPC MCA A+ A++ R+ YGA + K G Q Y Sbjct: 99 AAAQLGGKYLPQCTLYVTVEPCPMCAGAMGWAQVSRIVYGAGDDKRG-----YQRYAPNV 153 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E+ +Q++Q FFK +R Sbjct: 154 LHTKATVTGGVLEEECKQLMQQFFKAKR 181 >gi|153207852|ref|ZP_01946429.1| tRNA-specific adenosine deaminase [Coxiella burnetii 'MSU Goat Q177'] gi|154706920|ref|YP_001424041.1| tRNA-specific adenosine deaminase [Coxiella burnetii Dugway 5J108-111] gi|161830554|ref|YP_001596549.1| tRNA-specific adenosine deaminase [Coxiella burnetii RSA 331] gi|165918843|ref|ZP_02218929.1| tRNA-specific adenosine deaminase [Coxiella burnetii RSA 334] gi|212212896|ref|YP_002303832.1| tRNA-specific adenosine deaminase [Coxiella burnetii CbuG_Q212] gi|212219141|ref|YP_002305928.1| tRNA-specific adenosine deaminase [Coxiella burnetii CbuK_Q154] gi|215919009|ref|NP_819652.2| zinc-binding domain-containing protein [Coxiella burnetii RSA 493] gi|120576278|gb|EAX32902.1| tRNA-specific adenosine deaminase [Coxiella burnetii 'MSU Goat Q177'] gi|154356206|gb|ABS77668.1| tRNA-specific adenosine deaminase [Coxiella burnetii Dugway 5J108-111] gi|161762421|gb|ABX78063.1| tRNA-specific adenosine deaminase [Coxiella burnetii RSA 331] gi|165917475|gb|EDR36079.1| tRNA-specific adenosine deaminase [Coxiella burnetii RSA 334] gi|206583894|gb|AAO90166.2| tRNA-specific adenosine deaminase [Coxiella burnetii RSA 493] gi|212011306|gb|ACJ18687.1| tRNA-specific adenosine deaminase [Coxiella burnetii CbuG_Q212] gi|212013403|gb|ACJ20783.1| tRNA-specific adenosine deaminase [Coxiella burnetii CbuK_Q154] Length = 148 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +FM AL A+ A NE+P+GAV V N+I+ N L D TAHAEILA+R Sbjct: 2 TDELFMHEALALAKKANENNEVPIGAVLVKENEIVGHGFNEPITLNDPTAHAEILALRNA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L + LYVTLEPC MC A+ ARI+RL +GA +P+ G +E+ Q Sbjct: 62 AKRVGNYRLVDTTLYVTLEPCAMCVGAMIQARIKRLVFGAFDPRAGAVESVFQLLNEPRL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + + ++ FF+ RR Sbjct: 122 NHRIVWTSGVIAEACAEPLKAFFRARR 148 >gi|254804815|ref|YP_003083036.1| probable cytidine deaminase [Neisseria meningitidis alpha14] gi|304387765|ref|ZP_07369945.1| tRNA-specific adenosine deaminase [Neisseria meningitidis ATCC 13091] gi|254668357|emb|CBA05413.1| probable cytidine deaminase [Neisseria meningitidis alpha14] gi|254671348|emb|CBA08775.1| putative hydrolase protein [Neisseria meningitidis alpha153] gi|304338241|gb|EFM04371.1| tRNA-specific adenosine deaminase [Neisseria meningitidis ATCC 13091] gi|319410268|emb|CBY90609.1| K01485 cytosine deaminase [Neisseria meningitidis WUE 2594] Length = 239 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 90 EEMEHFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 149 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + Sbjct: 150 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 209 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + I GI ++ R ++ FF+ +R Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237 >gi|288906283|ref|YP_003431505.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus gallolyticus UCN34] gi|306832338|ref|ZP_07465492.1| tRNA-specific adenosine deaminase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325979296|ref|YP_004289012.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288733009|emb|CBI14590.1| putative cytidine/deoxycytidylate deaminase family protein [Streptococcus gallolyticus UCN34] gi|304425777|gb|EFM28895.1| tRNA-specific adenosine deaminase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325179224|emb|CBZ49268.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 168 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL+EAQ + + EIP+G V V N II R N E + HAEI+AI Sbjct: 7 EEKEYFMREALKEAQKSLAKEEIPIGCVIVKNGVIIGRGHNAREERQKAILHAEIMAIDD 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L+VT+EPC MC+ AI LARI ++ YGA+N K GG + T Sbjct: 67 ANENEGSWRLLDSTLFVTIEPCVMCSGAIGLARIPQVIYGAANQKFGGAGSLYDILTDVR 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF++ R Sbjct: 127 LNHRVEVETGILETECAAIMQDFFRKNR 154 >gi|225023945|ref|ZP_03713137.1| hypothetical protein EIKCOROL_00812 [Eikenella corrodens ATCC 23834] gi|224942970|gb|EEG24179.1| hypothetical protein EIKCOROL_00812 [Eikenella corrodens ATCC 23834] Length = 254 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 77/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL+ A+ A E+PVGAV V +II R N V HAEI A+ Sbjct: 105 EESEHWMQQALQLAEQALAAGEVPVGAVVVRRGEIIGRGANACVTEHSVCRHAEIAALTE 164 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L L DLYVTLEPC+MCA AI +RIRRL Y A+ PK G + + Sbjct: 165 AGRRLGNYRLDGCDLYVTLEPCSMCAGAIMQSRIRRLIYAAAEPKTGAAGSMLDLFANKQ 224 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + G+ S Q++Q FF+ERR Sbjct: 225 LNPHTAVQGGVLAAESAQLLQRFFQERR 252 >gi|313889859|ref|ZP_07823501.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus pseudoporcinus SPIN 20026] gi|313121904|gb|EFR45001.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus pseudoporcinus SPIN 20026] Length = 174 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL+EA+ + ++ EIP+G V V + KII R N EL HAEI+AI Sbjct: 7 EEKEFFMREALKEAEKSLVKAEIPIGCVIVKDGKIIGRGHNAREELNQAIMHAEIMAINE 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L E L+VT+EPC MC+ AI LARI + +GA N K GG + Q T Sbjct: 67 ANAHEKNWRLLETSLFVTIEPCVMCSGAIGLARIPHVVFGAPNQKFGGAGSLYQILTDQR 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E +++QDFF++ R Sbjct: 127 LNHRVELESGLLEAECAKMMQDFFRQGR 154 >gi|114705782|ref|ZP_01438685.1| CMP/dCMP deaminase, zinc-binding protein [Fulvimarina pelagi HTCC2506] gi|114538628|gb|EAU41749.1| CMP/dCMP deaminase, zinc-binding protein [Fulvimarina pelagi HTCC2506] Length = 148 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 87/143 (60%), Positives = 108/143 (75%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALEEA+ AA R E+PVGAV V + +II++AGN R KD TAHAE+LAIR C L Sbjct: 5 FMDEALEEARRAATRGEVPVGAVIVRDGEIIAKAGNETRAAKDPTAHAELLAIRRACLAL 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L + DLYVTLEPC MCA AIS ARIRRLY+GA++PKGG +ENG +F++ +TCHH+P Sbjct: 65 EAERLTDCDLYVTLEPCAMCAGAISFARIRRLYFGAADPKGGAVENGARFFSQSTCHHAP 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EIY G+SE S +++ FF ERR Sbjct: 125 EIYSGLSETASADLLKAFFAERR 147 >gi|307245435|ref|ZP_07527523.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254389|ref|ZP_07536227.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258848|ref|ZP_07540580.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853776|gb|EFM85993.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862688|gb|EFM94644.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867199|gb|EFM99055.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 196 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 60/145 (41%), Positives = 78/145 (53%), Gaps = 1/145 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ FM ALE A A EIPVGAV V II N+ +L D +AHAE+LAIR Sbjct: 38 EQDIHFMRYALELADRAEAIGEIPVGAVLVDQEGNIIGEGWNQVIQLSDPSAHAEMLAIR 97 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L + LY TLEPCTMCA AI +R+RRL +GAS+ K G I + + Sbjct: 98 QAGKVQRNYRLLDCTLYATLEPCTMCAGAILHSRLRRLVFGASDYKTGAIGSRFHLFEDY 157 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +H EI G+ + Q I FF Sbjct: 158 KMNHFLEIRGGVLAEECSQKISRFF 182 >gi|113461754|ref|YP_719823.1| tRNA-adenosine deaminase [Haemophilus somnus 129PT] gi|112823797|gb|ABI25886.1| tRNA-adenosine deaminase [Haemophilus somnus 129PT] Length = 158 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 59/143 (41%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A EIPVGAV V I++ N + D TAHAEI+A+R + L Sbjct: 2 MRYALSLADKAEALGEIPVGAVLVDKQGDILAEGWNLSIIHNDPTAHAEIIALRQAGQKL 61 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPCTMCA AI +RI RL +GA + K G + + F+ +H Sbjct: 62 QNYRLLDTTLYVTLEPCTMCAGAILHSRIGRLVFGAYDYKTGAVGSRFHFFNDYKMNHIL 121 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ ++ Q I FF++RR Sbjct: 122 EITGGVLQEECSQKISVFFQKRR 144 >gi|116511524|ref|YP_808740.1| hypothetical protein LACR_0760 [Lactococcus lactis subsp. cremoris SK11] gi|116107178|gb|ABJ72318.1| tRNA-adenosine deaminase [Lactococcus lactis subsp. cremoris SK11] Length = 155 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 62/148 (41%), Positives = 87/148 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM+ AL+EAQ AA E+P+G V V + +II+R NR T HAE+ AI Sbjct: 6 EEKEFFMTEALKEAQKAAENEEVPIGVVIVKDGEIIARDFNRRELDGRATHHAEVCAIEA 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + L + L+VT+EPC MCA AI LARI ++Y+GA+NPK GG + Q Sbjct: 66 ANQAVGNWRLLDCALFVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQILEDKR 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ GI E +I+QDFFK RR Sbjct: 126 LNHRVQVESGILEYECAKIMQDFFKNRR 153 >gi|332289514|ref|YP_004420366.1| tRNA-specific adenosine deaminase [Gallibacterium anatis UMN179] gi|330432410|gb|AEC17469.1| tRNA-specific adenosine deaminase [Gallibacterium anatis UMN179] Length = 153 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 61/143 (42%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A NAA+ EIPVGAV V I++ N++ L D TAHAEI+A+R + L Sbjct: 1 MQYALALADNAAMMGEIPVGAVLVDEQGNIVAEGWNQSITLSDPTAHAEIMALRQAGQKL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI +RI+RL +GAS+ K G I + + +H Sbjct: 61 QNYRLLNLTLYVTLEPCPMCAGAILHSRIKRLVFGASDYKTGAIGSRFHLFEDYRMNHIV 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + I FF++RR Sbjct: 121 EITAGVLAEECSAKISQFFQKRR 143 >gi|225011298|ref|ZP_03701754.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-3C] gi|225004554|gb|EEG42520.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-3C] Length = 166 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 61/156 (39%), Positives = 88/156 (56%), Gaps = 9/156 (5%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL EA +A + E+PVGA+ V N++II+R N +L DVTAHAE+ AI Sbjct: 11 TDAYFMKLALAEAAHAFEKGEVPVGALVVANDRIIARGHNLTEQLTDVTAHAEMQAITAA 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE---------NG 113 L + L LYVTLEPC MCA A+ ++I ++ YGAS+PK GG+ + Sbjct: 71 AHHLGGKYLHNCTLYVTLEPCLMCAGALYWSQISKVVYGASDPKRGGLSVYSQHQASLSV 130 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 Q + + H E+ G+ + Q++QDFF ++R Sbjct: 131 PQSHPPSPLHPKTEVIGGVMATEATQLLQDFFAKKR 166 >gi|187478486|ref|YP_786510.1| zinc-binding cytidine/deoxycytidylate deaminase [Bordetella avium 197N] gi|115423072|emb|CAJ49603.1| putative zinc-binding cytidine/deoxycytidylate deaminase [Bordetella avium 197N] Length = 157 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 ++M ALE+A+ A + E+PVGAV V +++ NR D TAHAE++A+R Sbjct: 5 DEIYMHMALEQARLAYDQGEVPVGAVVVDGEGRVLGAGYNRTILDSDPTAHAEVMALRAA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L+ LP + LYVTLEPC MC A+ AR+ R+ +GA +PK G + +A Sbjct: 65 SRHLANYRLPGLTLYVTLEPCVMCIGAMLHARLTRVVFGAHDPKTGACGSVLDVGAVAQL 124 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ +++ FF+ERR Sbjct: 125 NHHTTVVGGVLAPPCGDLLRAFFRERR 151 >gi|320527136|ref|ZP_08028323.1| cytidine and deoxycytidylate deaminase zinc-binding region [Solobacterium moorei F0204] gi|320132464|gb|EFW25007.1| cytidine and deoxycytidylate deaminase zinc-binding region [Solobacterium moorei F0204] Length = 164 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 57/145 (39%), Positives = 83/145 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK +M ALEEA+ A +E+PVG V V + ++ISR N +L AHAE++AI+ Sbjct: 1 MKTHEEYMELALEEARKAEEIDEVPVGCVIVCDGEVISRGHNLKEQLNQAYAHAEMMAIQ 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + DLYVTLEPC MC I+L+RIR +YYG +PKGG +E + Sbjct: 61 KAAEVKGNWCLNDCDLYVTLEPCMMCTGIINLSRIRTVYYGTQDPKGGCLETVIDLKKIN 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +H P I I ++ +I+ ++F Sbjct: 121 RLNHYPNIVGNILQKECSEILTNYF 145 >gi|307249782|ref|ZP_07531760.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858197|gb|EFM90275.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 196 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 61/145 (42%), Positives = 80/145 (55%), Gaps = 1/145 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ FM ALE A A + EIPVGAV V II N+ +L D +AHAE+LAIR Sbjct: 38 EQDIHFMQYALELADRAEVIGEIPVGAVLVDQEGNIIGEGWNQVIQLSDPSAHAEMLAIR 97 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L + LYVTLEPCTMCA AI +R+RRL +GAS+ K G I + + Sbjct: 98 QAGKVQRNYRLLDCTLYVTLEPCTMCAGAILHSRLRRLVFGASDYKTGAIGSRFHLFEDY 157 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +H EI G+ + Q I FF Sbjct: 158 KMNHFLEIRGGVLAEECSQKISRFF 182 >gi|227328190|ref|ZP_03832214.1| tRNA-specific adenosine deaminase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 158 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 61/142 (42%), Positives = 75/142 (52%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL AQ A E+PVGAV VL+N+ I NR D TAHAEI+A+R G ++L Sbjct: 1 MRYALTLAQRAQDEGEVPVGAVLVLDNEAIGEGWNRPIGHHDPTAHAEIMALRQGGQVLQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L E LYVTLEPC MCA A+ +RI RL YGAS+ K G + +H Sbjct: 61 NYRLLETTLYVTLEPCIMCAGAMIHSRIGRLVYGASDEKTGAAGSLVDILRHPGMNHQIV 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I GI + FF+ RR Sbjct: 121 IESGILADECSATLSAFFRLRR 142 >gi|313848259|emb|CBY17260.1| putative cytidine/deoxycytidylate deaminase family protein [Chlamydophila psittaci RD1] gi|328914938|gb|AEB55771.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila psittaci 6BC] Length = 157 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM+ AL+EA+ A +E+PVG V V +NKII+R N +L+D TAHAEIL I Sbjct: 3 IEKDIFFMNQALKEARQAYDEDEVPVGCVIVKDNKIIARGHNTTEKLQDPTAHAEILCIG 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + LY TLEPC MCA AI ARIRR+ + A + + G + + Sbjct: 63 AAAQYLENWRLVDTVLYCTLEPCLMCAGAIQQARIRRIVWAAPDLRLGAGGSWINVFKEK 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E GI + + Q+++ FF +R Sbjct: 123 HPFHQVECCSGICREDAEQLMKQFFIGKR 151 >gi|224025750|ref|ZP_03644116.1| hypothetical protein BACCOPRO_02491 [Bacteroides coprophilus DSM 18228] gi|224018986|gb|EEF76984.1| hypothetical protein BACCOPRO_02491 [Bacteroides coprophilus DSM 18228] Length = 144 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 63/149 (42%), Positives = 84/149 (56%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL+EA+ AA R E+PVGAV V ++II+RA N L DVTAHAE+ AI Sbjct: 1 MADDTYYMRQALQEAREAANRGEVPVGAVVVCRDRIIARAHNLTETLTDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L LYVT+EPC MCA AI+ A+ RL YGA + K G Q Y Sbjct: 61 AAAGWLGGKYLNNCTLYVTIEPCVMCAGAIAWAQTGRLVYGADDEKRG-----FQRYAPQ 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ Q+++DFF++RR Sbjct: 116 ALHPKTQVTSGVLADECAQLMKDFFQKRR 144 >gi|297172082|gb|ADI23064.1| cytosine/adenosine deaminases [uncultured gamma proteobacterium HF0770_07M15] Length = 150 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 56/142 (39%), Positives = 80/142 (56%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ +A A +E+PVGAV V +I+RA N+ LKD TAHAE++A+ + Sbjct: 1 MQAAIRQAVKAYEEDEVPVGAVVVREGAVIARAWNQVELLKDATAHAEMIALTAAEAAVG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L LYVT EPC MCA A+ RI R+ +GA++P+GG T +H+ + Sbjct: 61 DWRLTGCTLYVTKEPCPMCAGALVHCRIDRVVFGATDPRGGAAGGAMNLLQFPTLNHACD 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I G+ E R ++Q FFKE+R Sbjct: 121 ITGGVMEPDCRNLLQTFFKEKR 142 >gi|323340129|ref|ZP_08080393.1| tRNA-specific adenosine deaminase [Lactobacillus ruminis ATCC 25644] gi|323092320|gb|EFZ34928.1| tRNA-specific adenosine deaminase [Lactobacillus ruminis ATCC 25644] Length = 153 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 57/151 (37%), Positives = 75/151 (49%), Gaps = 2/151 (1%) Query: 1 MKKGNV--FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + FM AL+EA++A E+P+G V V +II R NR EL+D T HAE++A Sbjct: 1 MTEEEKIAFMKEALKEAKSAYEAGEVPIGCVIVSGGRIIGRGHNRREELQDATEHAEMIA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 IR R L L L+VTLEPC MC AI ARI ++YGA + K G Sbjct: 61 IREANRTLGSFRLENCALFVTLEPCPMCTGAIINARIPEVFYGAPDEKAGTCGTLMNLLG 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G +++ DFF R Sbjct: 121 DERFNHRASIEKGCLGNECGKLLSDFFASLR 151 >gi|184199963|ref|YP_001854170.1| putative deaminase [Kocuria rhizophila DC2201] gi|183580193|dbj|BAG28664.1| putative tRNA-specific adenosine deaminase [Kocuria rhizophila DC2201] Length = 158 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 75/146 (51%), Gaps = 1/146 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL EA A ++P+GAV + + ++I NR E D TAHAE+LA+R Sbjct: 13 EGWMDLALSEAALTAASGDVPIGAVVLDTDGRVIGTGRNRREECGDPTAHAEVLALREAA 72 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L L VTLEPC MCA A+ LAR+ + +GA +PK G + + Sbjct: 73 AHRGEWRLEGCTLVVTLEPCAMCAGAVVLARVPTVVFGAWDPKAGACGSVFDIVRDPRLN 132 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ E +++DFF+ R Sbjct: 133 HWVEVTGGVREDECAALLRDFFRTHR 158 >gi|148244957|ref|YP_001219651.1| hypothetical protein COSY_0821 [Candidatus Vesicomyosocius okutanii HA] gi|146326784|dbj|BAF61927.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii HA] Length = 153 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 56/144 (38%), Positives = 80/144 (55%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M+ A+E+A+ A EIPVGA+ + NN++I A N+ D TAHAEI +R+ + Sbjct: 7 AWMTLAIEQAKQAQQIGEIPVGAILIQNNQLIGGAHNQTILNNDPTAHAEIQLLRIAGKK 66 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L+ L LYVTLEPCTMC AI ARI + +GA + K G + +H Sbjct: 67 LNNYRLSGTTLYVTLEPCTMCLGAIVHARISCIVFGAYDKKSGACGSCIDLLNNRCFNHL 126 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 I GI + + ++QDFFK +R Sbjct: 127 ISIKSGILADQCKNLLQDFFKNKR 150 >gi|169824845|ref|YP_001692456.1| putative deaminase [Finegoldia magna ATCC 29328] gi|167831650|dbj|BAG08566.1| putative deaminase [Finegoldia magna ATCC 29328] Length = 155 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 1/148 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM A+E+A+ A +E+PVG V V N +II++A N + T HAE+ AI Sbjct: 3 NNDEKFMIKAIEQARIAFDMDEVPVGCVIVKNGEIIAQAYNSVETDNNATMHAELKAINQ 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 +++ L + +YVTLEPC MC A+ +RI ++ +GA + K G + Sbjct: 63 ATQVIGNFRLDDCTMYVTLEPCVMCTGALVYSRIPKVVFGAFDKKRGACGSLLSLNDYEG 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ I E+ +++Q FF+ R Sbjct: 123 LNHKIEVKS-IMEKECVELMQSFFRRIR 149 >gi|261868753|ref|YP_003256675.1| tRNA-specific adenosine deaminase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261414085|gb|ACX83456.1| tRNA-specific adenosine deaminase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 175 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 81/147 (55%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL A A EIPVGAV V +II N + D TAHAEI+ +R G Sbjct: 9 DEKFMHHALMLAGKAEALGEIPVGAVLVSEAGEIIGEGWNLSIIHSDPTAHAEIVTLRQG 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L LYVTLEPCTMCA AI +RI+RL +GA++ K G + + F+ Sbjct: 69 GQKLQNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGAADYKTGAVGSRFHFFDDYKM 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ EI G+ +Q + + FF++RR Sbjct: 129 NHAIEITGGVLQQECSEKLSAFFQKRR 155 >gi|171777570|ref|ZP_02919258.1| hypothetical protein STRINF_00093 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283179|gb|EDT48603.1| hypothetical protein STRINF_00093 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 168 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL+EAQ + + EIP+G V V N II R N E + HAEI+AI Sbjct: 7 EEKEYFMREALKEAQKSLAKEEIPIGCVIVKNGDIIGRGHNAREERQKAILHAEIMAIDD 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L+VT+EPC MC+ AI LAR+ ++ YGA+N K GG + T Sbjct: 67 ANENEGSWRLLDSTLFVTIEPCVMCSGAIGLARVPQVIYGAANQKFGGAGSLYDILTDVR 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF++ R Sbjct: 127 LNHRVEVETGILETECAAIMQDFFRKNR 154 >gi|511885|gb|AAA96138.1| nitrogen fixation protein [Bradyrhizobium japonicum] Length = 142 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 72/142 (50%), Positives = 102/142 (71%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+ A+NA E+P+G V V N ++I+ A NR D TAHAEI+A+R + + Sbjct: 1 MDLALKTAENAGKAGEVPIGCVVVRNYEVIATAANRTLTDYDPTAHAEIVALREAAKKIG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L + DLYVTLEPCTMCA AIS AR+RRLYYGA++PKGG +E+G +F+ TCHH+P+ Sbjct: 61 SERLVDCDLYVTLEPCTMCAGAISFARVRRLYYGAADPKGGAVESGVRFFASPTCHHAPD 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G+ E + +++++FF+ERR Sbjct: 121 VYSGVGESEAARLLKEFFRERR 142 >gi|197335350|ref|YP_002155408.1| tRNA-specific adenosine deaminase [Vibrio fischeri MJ11] gi|197316840|gb|ACH66287.1| tRNA-specific adenosine deaminase [Vibrio fischeri MJ11] Length = 174 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 59/144 (40%), Positives = 82/144 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + +M A+E A A E+PVGAV VL+++II NR+ D TAHAE++AI+ Sbjct: 8 RDASFYMQRAMELAAIAEQEGEVPVGAVIVLDDEIIGEGWNRSISTHDATAHAEMMAIKQ 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L + LYVTLEPC MCA AI +RI+R+ +GAS+ K G + +T AT Sbjct: 68 AGSKIENYRLVDATLYVTLEPCPMCAGAIVHSRIKRVIFGASDMKTGASGSVINLFTSAT 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 HS E G+ E R +Q FF Sbjct: 128 AFHSVECESGVMEDACRSQLQAFF 151 >gi|194289718|ref|YP_002005625.1| tRNA-specific adenosine deaminase [Cupriavidus taiwanensis LMG 19424] gi|193223553|emb|CAQ69558.1| tRNA-specific adenosine deaminase [Cupriavidus taiwanensis LMG 19424] Length = 194 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 57/144 (39%), Positives = 84/144 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M ALEEA+ A E+PVGAV V N+ II+R N D +AHAE+ A+R Sbjct: 24 ERDARYMRAALEEARLAEAAGEVPVGAVVVWNDTIIARGHNLPIRSVDPSAHAEMQALRA 83 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 +++ +PE +LYVTLEPC MC+ AI AR+R + +GAS+PK G + + A Sbjct: 84 AAQVIGNYRMPECELYVTLEPCAMCSGAILHARLRHVVFGASDPKTGAAGSVVNLFEQAQ 143 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 +H I G+ Q+++DFF Sbjct: 144 LNHQTTIAGGVLADPCGQMLKDFF 167 >gi|28897437|ref|NP_797042.1| YfhC protein [Vibrio parahaemolyticus RIMD 2210633] gi|28805649|dbj|BAC58926.1| YfhC protein [Vibrio parahaemolyticus RIMD 2210633] Length = 161 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 54/142 (38%), Positives = 77/142 (54%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ A L E+PVGAV V + ++I+ NR+ D TAHAEI +R +L Sbjct: 1 MRRALALAEQAELEGEVPVGAVLVKDGEVIAEGWNRSICSHDATAHAEIQTLRNAGAVLE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +R++R+ +GA + K G + +H Sbjct: 61 NYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAAYHYAT 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ E R+ +Q FFK RR Sbjct: 121 VEKGLLEDECREQLQAFFKRRR 142 >gi|166154188|ref|YP_001654306.1| cytosine deaminase [Chlamydia trachomatis 434/Bu] gi|166155063|ref|YP_001653318.1| cytosine deaminase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|255311685|ref|ZP_05354255.1| cytosine deaminase [Chlamydia trachomatis 6276] gi|255317986|ref|ZP_05359232.1| cytosine deaminase [Chlamydia trachomatis 6276s] gi|255349249|ref|ZP_05381256.1| cytosine deaminase [Chlamydia trachomatis 70] gi|255503786|ref|ZP_05382176.1| cytosine deaminase [Chlamydia trachomatis 70s] gi|255507467|ref|ZP_05383106.1| cytosine deaminase [Chlamydia trachomatis D(s)2923] gi|301335433|ref|ZP_07223677.1| cytosine deaminase [Chlamydia trachomatis L2tet1] gi|165930176|emb|CAP03660.1| Cytosine deaminase [Chlamydia trachomatis 434/Bu] gi|165931051|emb|CAP06614.1| Cytosine deaminase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|289525890|emb|CBJ15372.1| Cytosine deaminase [Chlamydia trachomatis Sweden2] gi|296435476|gb|ADH17654.1| cytosine deaminase [Chlamydia trachomatis E/150] gi|296437331|gb|ADH19501.1| cytosine deaminase [Chlamydia trachomatis G/11222] gi|296439193|gb|ADH21346.1| cytosine deaminase [Chlamydia trachomatis E/11023] Length = 163 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM AL+EA+ A ++E+PVG + V +KII+R N +LKD TAHAE++ I Sbjct: 3 IEKDLFFMKKALDEARKAYEQDEVPVGCIIVHGDKIIARGHNSVEQLKDPTAHAEMICIS 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L + LY TLEPC MCA AI LARI R+ +GA + + G + + Sbjct: 63 AAAEYLENWRLKDTILYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEK 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E G+ Q S Q++++FF E+R Sbjct: 123 HPFHQVECCSGVCYQESEQLMKNFFLEKR 151 >gi|258540446|ref|YP_003174945.1| CMP/dCMP deaminase zinc-binding [Lactobacillus rhamnosus Lc 705] gi|257152122|emb|CAR91094.1| CMP/dCMP deaminase, zinc-binding [Lactobacillus rhamnosus Lc 705] Length = 168 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 61/145 (42%), Positives = 80/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N +M AL EA+ AA E+P+GAV V + +II R N +D T HAEILAI+ CR Sbjct: 7 NQYMIAALVEAKKAAAIGEVPIGAVVVHDQQIIGRGYNLRETTQDATQHAEILAIQAACR 66 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + L+VTLEPC MCA A+ ARI Y+GA++PK G +H Sbjct: 67 QLGTWRLEDCSLFVTLEPCPMCAGAMINARIATCYFGATDPKAGVAGTFYNLLEDTRFNH 126 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + PGI S ++QDFF+ R Sbjct: 127 QVAVVPGIQATASAALLQDFFRAIR 151 >gi|150395640|ref|YP_001326107.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium medicae WSM419] gi|150027155|gb|ABR59272.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium medicae WSM419] Length = 149 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 84/149 (56%), Positives = 107/149 (71%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM AL+EA+ AA R E+P+GAV V ++++ AGNR REL D+TAHAEI AIR Sbjct: 1 MTDTAPFMQAALQEARKAAARGEVPIGAVIVHEGEVVAAAGNRTRELNDITAHAEIEAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M + E L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FY+ Sbjct: 61 MAATAIGGERLSGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYSSP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCHH P++Y G++E+ + I++ FF RR Sbjct: 121 TCHHVPDVYSGLAEREAADILRAFFAARR 149 >gi|15618909|ref|NP_225195.1| cytosine deaminase [Chlamydophila pneumoniae CWL029] gi|16752024|ref|NP_445390.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila pneumoniae AR39] gi|4377331|gb|AAD19138.1| cytosine deaminase [Chlamydophila pneumoniae CWL029] gi|8163513|gb|AAF73712.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila pneumoniae AR39] Length = 155 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+K FM A +EA+ A ++E+PVG V V ++KII+RA N +LKD TAHAEIL I Sbjct: 1 MEKDIFFMQQAFKEARKAYDQDEVPVGCVIVKDDKIIARAHNSVEKLKDATAHAEILCIG 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + LY TLEPC MCA AI LARI R+ + A + + G + +T Sbjct: 61 SAAQDLDNWRLLDTVLYCTLEPCLMCAGAIQLARIPRIVWAAPDVRLGAGGSWVNIFTEE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H+ G+ + + +++ FF E+R Sbjct: 121 HPFHTVSCTGGVCSEEAEHLMKKFFVEKR 149 >gi|255320509|ref|ZP_05361690.1| tRNA-specific adenosine deaminase [Acinetobacter radioresistens SK82] gi|262378401|ref|ZP_06071558.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|255302481|gb|EET81717.1| tRNA-specific adenosine deaminase [Acinetobacter radioresistens SK82] gi|262299686|gb|EEY87598.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 163 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 85/148 (57%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M A E+A AA + E+PVGAV V NN++I N+ D TAHAEI A+R Sbjct: 7 DDHYWMQLAYEQAALAASKGEVPVGAVIVSNNQVIGVGHNQPIFKHDPTAHAEIQALREA 66 Query: 63 CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C++ LP + LYVTLEPCTMC A+ AR++R+ +GA+ PK G + + + Sbjct: 67 CQLTQNYRLPDDTTLYVTLEPCTMCVGALIHARVQRVVFGATEPKAGSLVSARRLLESGY 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G +++ Q + DFF+ RR Sbjct: 127 YNHLFQFESGCLQEQCSQQLSDFFRMRR 154 >gi|59711257|ref|YP_204033.1| tRNA-specific adenosine deaminase [Vibrio fischeri ES114] gi|59479358|gb|AAW85145.1| tRNA-specific adenosine deaminase [Vibrio fischeri ES114] Length = 171 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 58/144 (40%), Positives = 82/144 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + +M A+E A A E+PVGAV VL+++II NR+ D TAHAE++AI+ Sbjct: 8 RDASFYMQRAMELAAIAEQEGEVPVGAVIVLDDEIIGEGWNRSISTHDATAHAEMMAIKQ 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L + LYVTLEPC MCA AI +RI+R+ +GAS+ K G + +T AT Sbjct: 68 AGSKIENYRLVDATLYVTLEPCPMCAGAIVHSRIKRVIFGASDMKTGASGSVINLFTSAT 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 H E G+ E+ R +Q FF Sbjct: 128 AFHFVECESGVMEEACRSQLQAFF 151 >gi|330504655|ref|YP_004381524.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina NK-01] gi|328918941|gb|AEB59772.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina NK-01] Length = 158 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 83/148 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL +A+ A + E+PVGAV V + +++ + N D +AHAE++AIR Sbjct: 10 SRDEHFMRLALAQARLGAGQGEVPVGAVLVQDGEVVGQGFNCPILRHDPSAHAEMVAIRA 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + LP LYVTLEPC+MCA I ARI R+ + AS P+ G + QF+ Sbjct: 70 AAQSVQNYRLPGSTLYVTLEPCSMCAGLIVHARIARVVFAASEPRAGVAISQGQFFDQGF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + S +++DFFK RR Sbjct: 130 LNHRVLVEGGLLAEESGALLKDFFKARR 157 >gi|29376713|ref|NP_815867.1| cytidine/deoxycytidylate deaminase family protein [Enterococcus faecalis V583] gi|227520261|ref|ZP_03950310.1| nucleoside deaminase [Enterococcus faecalis TX0104] gi|227555305|ref|ZP_03985352.1| nucleoside deaminase [Enterococcus faecalis HH22] gi|229549515|ref|ZP_04438240.1| nucleoside deaminase [Enterococcus faecalis ATCC 29200] gi|256617220|ref|ZP_05474066.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ATCC 4200] gi|256763008|ref|ZP_05503588.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T3] gi|256853656|ref|ZP_05559021.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T8] gi|256956593|ref|ZP_05560764.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis DS5] gi|256963481|ref|ZP_05567652.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis HIP11704] gi|257079519|ref|ZP_05573880.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis JH1] gi|257084716|ref|ZP_05579077.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Fly1] gi|257087338|ref|ZP_05581699.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis D6] gi|257090472|ref|ZP_05584833.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis CH188] gi|294779058|ref|ZP_06744471.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis PC1.1] gi|307270381|ref|ZP_07551686.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX4248] gi|307272388|ref|ZP_07553644.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0855] gi|307277264|ref|ZP_07558368.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX2134] gi|307287809|ref|ZP_07567847.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0109] gi|307290876|ref|ZP_07570767.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0411] gi|312901462|ref|ZP_07760737.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0470] gi|312903780|ref|ZP_07762953.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0635] gi|312953348|ref|ZP_07772190.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0102] gi|29344177|gb|AAO81937.1| cytidine/deoxycytidylate deaminase family protein [Enterococcus faecalis V583] gi|227072340|gb|EEI10303.1| nucleoside deaminase [Enterococcus faecalis TX0104] gi|227175516|gb|EEI56488.1| nucleoside deaminase [Enterococcus faecalis HH22] gi|229305333|gb|EEN71329.1| nucleoside deaminase [Enterococcus faecalis ATCC 29200] gi|256596747|gb|EEU15923.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ATCC 4200] gi|256684259|gb|EEU23954.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T3] gi|256710599|gb|EEU25642.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T8] gi|256947089|gb|EEU63721.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis DS5] gi|256953977|gb|EEU70609.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis HIP11704] gi|256987549|gb|EEU74851.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis JH1] gi|256992746|gb|EEU80048.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Fly1] gi|256995368|gb|EEU82670.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis D6] gi|256999284|gb|EEU85804.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis CH188] gi|294453888|gb|EFG22277.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis PC1.1] gi|306498076|gb|EFM67602.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0411] gi|306501197|gb|EFM70502.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0109] gi|306506194|gb|EFM75360.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX2134] gi|306510942|gb|EFM79956.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0855] gi|306513289|gb|EFM81916.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX4248] gi|310628736|gb|EFQ12019.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0102] gi|310632854|gb|EFQ16137.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0635] gi|311291451|gb|EFQ70007.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0470] gi|315025888|gb|EFT37820.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX2137] gi|315028203|gb|EFT40135.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX4000] gi|315035707|gb|EFT47639.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0027] gi|315149190|gb|EFT93206.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0012] gi|315154468|gb|EFT98484.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0031] gi|315157427|gb|EFU01444.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0312] gi|315161835|gb|EFU05852.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0645] gi|315164307|gb|EFU08324.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX1302] gi|315166488|gb|EFU10505.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX1341] gi|315171494|gb|EFU15511.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX1342] gi|315575193|gb|EFU87384.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0309B] gi|315578180|gb|EFU90371.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0630] gi|315582620|gb|EFU94811.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0309A] gi|323481270|gb|ADX80709.1| cytidine and deoxycytidylate deaminase family protein [Enterococcus faecalis 62] gi|327535599|gb|AEA94433.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis OG1RF] Length = 173 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM A+ EA+ A E+P+GAV V +II R N ++ TAHAE+ AI+ Sbjct: 11 EEKEFFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQE 70 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 CR + L E L+VTLEPC MC+ A+ LARI +YYGA++PK G Sbjct: 71 ACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDER 130 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R ++ FFK+ R Sbjct: 131 FNHVAYVEAGVLEEECRLLLVQFFKKLR 158 >gi|319946112|ref|ZP_08020360.1| tRNA-specific adenosine deaminase [Streptococcus australis ATCC 700641] gi|319747758|gb|EFW00004.1| tRNA-specific adenosine deaminase [Streptococcus australis ATCC 700641] Length = 170 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ A EIP+G V V + +II R N EL+ HAE++AI Sbjct: 6 LEEKEAFMREALKEAEIALAHEEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEVMAIE 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + L+VT+EPC MC+ AI LARI ++ YGA+N K GG + T Sbjct: 66 EANQKEKSWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIYGATNQKFGGAGSLYDILTDE 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+Q FF++ R Sbjct: 126 RLNHRVEVETGILEAECAAIMQTFFRQGR 154 >gi|315146338|gb|EFT90354.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX4244] Length = 173 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM A+ EA+ A E+P+GAV V +II R N + TAHAE+ AI+ Sbjct: 11 EEKEFFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARHEATAHAEMYAIQE 70 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 CR + L E L+VTLEPC MC+ A+ LARI +YYGA++PK G Sbjct: 71 ACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDER 130 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R ++ FFK+ R Sbjct: 131 FNHVAYVEAGVLEEECRLLLVQFFKKLR 158 >gi|296875658|ref|ZP_06899727.1| possible cytosine deaminase [Streptococcus parasanguinis ATCC 15912] gi|322390383|ref|ZP_08063906.1| tRNA-specific adenosine deaminase [Streptococcus parasanguinis ATCC 903] gi|296433342|gb|EFH19120.1| possible cytosine deaminase [Streptococcus parasanguinis ATCC 15912] gi|321142924|gb|EFX38379.1| tRNA-specific adenosine deaminase [Streptococcus parasanguinis ATCC 903] Length = 180 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ +FM AL+EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 16 IEEKAMFMREALKEAEIALANDEIPIGCVLVKDGQIIGRGHNAREELQRAVMHAEIMAIE 75 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L + L+VT+EPC MC+ AI LARI ++ YGA+N K GG + Sbjct: 76 EANQRENSWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIYGATNQKFGGAGSLYDILADE 135 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+Q FF++ R Sbjct: 136 RLNHRVEVETGILEAECAAIMQTFFRQGR 164 >gi|257094052|ref|YP_003167693.1| CMP/dCMP deaminase zinc-binding [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046576|gb|ACV35764.1| CMP/dCMP deaminase zinc-binding [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 153 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL AQ A E+PVGA+ V + I+ R N D TAHAEI A+R Sbjct: 2 DDEYFMREALSLAQAAECLGEVPVGALVVRDGVIVGRGFNSPIGEHDPTAHAEIAALRDA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L LP +L+VTLEPC MCA A+ AR+ RL YGA +PK G + + + Sbjct: 62 ARTLRNYRLPGCELFVTLEPCAMCAGAMLQARLARLVYGARDPKTGVHGSVVDLFAVGRL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ +++ DFF RR Sbjct: 122 NHHTQVVGGVLAAECGRLLSDFFAARR 148 >gi|303234521|ref|ZP_07321158.1| cytidine and deoxycytidylate deaminase zinc-binding region [Finegoldia magna BVS033A4] gi|302494355|gb|EFL54124.1| cytidine and deoxycytidylate deaminase zinc-binding region [Finegoldia magna BVS033A4] Length = 155 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 1/148 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM A+E+A+ A +E+PVG V V N +II++A N + T HAE+ AI Sbjct: 3 NNDEKFMIKAIEQARIAFDLDEVPVGCVIVKNGEIIAQAYNSVETDNNATMHAELKAINQ 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 +++ L +YVTLEPC MC A+ +RI ++ +GA + K G + Sbjct: 63 ATQVIGNFRLDNCTMYVTLEPCVMCTGALVYSRIPKVVFGAFDKKRGACGSLLSLNDYEG 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ I E+ +++Q FF+ R Sbjct: 123 LNHKIEVKS-IMEKECVELMQSFFRRIR 149 >gi|268611568|ref|ZP_06145295.1| cytosine/adenosine deaminase [Ruminococcus flavefaciens FD-1] Length = 153 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 62/147 (42%), Positives = 83/147 (56%), Gaps = 3/147 (2%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M ALE A+ A E+PVGAV V +I+ NR K+ AHAEI AI Sbjct: 2 DNYMKRALELAREAFDEGEVPVGAVVVKKTTGEIVGEGRNRRETAKNALAHAEIEAIDQA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 CR L LPE LYVTLEPC MC AI +RI +Y+GA + K G E+ + ++L Sbjct: 62 CRKLGGWRLPECALYVTLEPCPMCCGAIINSRIDNVYFGAYDYKSGSAESVQKMFSLPY- 120 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 ++ PE+ GI E+ I+ +FFKE R Sbjct: 121 NYRPEVMGGIMEEECSAILSEFFKELR 147 >gi|149196365|ref|ZP_01873420.1| Putative cytosine/adenosine deaminase [Lentisphaera araneosa HTCC2155] gi|149140626|gb|EDM29024.1| Putative cytosine/adenosine deaminase [Lentisphaera araneosa HTCC2155] Length = 174 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL +A+ A E+P+GAV V ++I++A N+ LKD TAHAEILA+ Sbjct: 19 SDEHYMRMALRQAEQAFQAGEVPIGAVVVHEGEVIAKAWNQVEMLKDATAHAEILALTQA 78 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L LYVT EPC MCA A+ +RI R+ +G ++ KGGG + Sbjct: 79 SAHLDRWRLHGCTLYVTKEPCPMCAGALVNSRIDRVVFGLADEKGGGCGGSFHIHDHDGL 138 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + E R +IQ FFK RR Sbjct: 139 LHKVKSEGHCCEDECRLLIQSFFKMRR 165 >gi|299067502|emb|CBJ38701.1| tRNA-specific adenosine deaminase [Ralstonia solanacearum CMR15] Length = 183 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL +A+ A E+PVGAV V N+I+ N D +AHAE+ A+R Sbjct: 17 ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LPE +++VTLEPC MCA A+ AR+ R+ YGA +PK G + + Sbjct: 77 AAVRLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I + Q +++ FF ERR Sbjct: 137 LNHQTAIIGSVLAQDCGDMLRAFFAERR 164 >gi|241889023|ref|ZP_04776327.1| tRNA-specific adenosine deaminase [Gemella haemolysans ATCC 10379] gi|241864272|gb|EER68650.1| tRNA-specific adenosine deaminase [Gemella haemolysans ATCC 10379] Length = 165 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K + +M ALEEA+ A + E+P+GAV V+ +K++++A N E + HAEIL I+ Sbjct: 13 KDHSYYMEMALEEARRAYAKGEVPIGAVLVIGDKVVAKAHNTREENQQALNHAEILVIKE 72 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C L LY T+EPC MC+ AI ARI + YGAS+PK G + Sbjct: 73 SCEKQGFWRLDNSYLYTTVEPCVMCSGAIVQARIENVIYGASDPKYGCCGSCIDLVGENK 132 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I G+ E+ ++++FFKE R Sbjct: 133 FNHQAKIISGVLEEECSILMKNFFKELR 160 >gi|120611742|ref|YP_971420.1| CMP/dCMP deaminase [Acidovorax citrulli AAC00-1] gi|120590206|gb|ABM33646.1| CMP/dCMP deaminase, zinc-binding protein [Acidovorax citrulli AAC00-1] Length = 484 Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 54/145 (37%), Positives = 76/145 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M AL+EA AA R EIPVGAV V + ++++R N D TAHAEI+A+R Sbjct: 17 QADEAWMRIALQEAAEAAARGEIPVGAVVVRDGELVARGSNAPIAGHDPTAHAEIVALRA 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L LYVTLEPC MC+ A+ AR+ R+ YGA + K G + + Sbjct: 77 AAGRLGNYRLDGCTLYVTLEPCAMCSGAMLHARLDRVVYGAPDAKTGAAGSVVDLFAQPA 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFK 146 +H I G+ Q ++ FF+ Sbjct: 137 LNHHTRIEGGVLAQECGALLSGFFQ 161 >gi|146342901|ref|YP_001207949.1| putative cytidine and deoxycytidylate deaminase [Bradyrhizobium sp. ORS278] gi|146195707|emb|CAL79734.1| putative cytidine and deoxycytidylate deaminase [Bradyrhizobium sp. ORS278] Length = 148 Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 76/143 (53%), Positives = 104/143 (72%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL+ A++AA+ E+P+G V V + +I+ A NR +D TAHAEILA+R + + Sbjct: 6 FMDLALKAAESAAISGEVPIGCVVVRDGTVIAAAANRTLTDRDPTAHAEILALRQAAQAI 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L + DLYVTLEPCTMCA AIS ARIRRLYYGA++ KGG +E+G +F+ TCHH+P Sbjct: 66 GSERLIDCDLYVTLEPCTMCAGAISFARIRRLYYGAADSKGGAVESGVRFFAAPTCHHAP 125 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y + EQ+S Q++++FFK RR Sbjct: 126 EVYSAVGEQQSAQMLREFFKARR 148 >gi|257082102|ref|ZP_05576463.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis E1Sol] gi|257419759|ref|ZP_05596753.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T11] gi|257422022|ref|ZP_05599012.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis X98] gi|256990132|gb|EEU77434.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis E1Sol] gi|257161587|gb|EEU91547.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T11] gi|257163846|gb|EEU93806.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis X98] gi|315157050|gb|EFU01067.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0043] Length = 173 Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM A+ EA+ A E+P+GAV V +II R N ++ TAHAE+ AI+ Sbjct: 11 EEKEFFMREAIAEAKKAEGLAEVPIGAVIVRKGEIIGRGHNLREARQEATAHAEMYAIQE 70 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 CR + L E L+VTLEPC MC+ A+ LARI +YYGA++PK G Sbjct: 71 ACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDER 130 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R ++ FFK+ R Sbjct: 131 FNHVAYVEAGVLEEECRLLLVQFFKKLR 158 >gi|148826450|ref|YP_001291203.1| preprotein translocase subunit SecA [Haemophilus influenzae PittEE] gi|148716610|gb|ABQ98820.1| preprotein translocase subunit SecA [Haemophilus influenzae PittEE] Length = 161 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 62/147 (42%), Positives = 82/147 (55%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMG 62 M ALE A A EIPVGAV V + + II N + D TAHAEI+A+R G Sbjct: 11 DEKMMRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNG 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L LYVTLEPCTMCA AI +RI+RL +GAS+ K G I + F+ Sbjct: 71 AKNIQNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKM 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ EI G+ + Q + FF++RR Sbjct: 131 NHTLEITSGVLAEECSQKLSTFFQKRR 157 >gi|256844520|ref|ZP_05550006.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus 125-2-CHN] gi|256849091|ref|ZP_05554524.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus MV-1A-US] gi|262047573|ref|ZP_06020528.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus MV-3A-US] gi|312977923|ref|ZP_07789669.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus crispatus CTV-05] gi|256613598|gb|EEU18801.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus 125-2-CHN] gi|256713867|gb|EEU28855.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus MV-1A-US] gi|260572149|gb|EEX28714.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus MV-3A-US] gi|310895230|gb|EFQ44298.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus crispatus CTV-05] Length = 166 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 50/149 (33%), Positives = 85/149 (57%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A+++A+ A + E+P+GAV V + +++ NR +D T HAE++AI+ Sbjct: 5 EDKRKYMQLAIDQAKEAEKQGEVPIGAVVVDPDGRVVGTGYNRRELDEDATQHAEMIAIK 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + +++ Sbjct: 65 EACSKLGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFSVE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P G+ + Q+++DFF+ R Sbjct: 125 KFNHHPHAIRGLYRDQCAQMLKDFFRAIR 153 >gi|71909993|ref|YP_281543.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS5005] gi|60416281|sp|P68999|TADA_STRP1 RecName: Full=tRNA-specific adenosine deaminase gi|71852775|gb|AAZ50798.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS5005] Length = 171 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 5 LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGASN K GG+++ Q T Sbjct: 65 EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGVDSLYQILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ I+Q FF++ R Sbjct: 125 RLNHRVQVERGLLAADCANIMQTFFRQGR 153 >gi|315652559|ref|ZP_07905540.1| cytidine/deoxycytidylate deaminase [Eubacterium saburreum DSM 3986] gi|315485188|gb|EFU75589.1| cytidine/deoxycytidylate deaminase [Eubacterium saburreum DSM 3986] Length = 157 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 51/153 (33%), Positives = 80/153 (52%), Gaps = 5/153 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + + F+ A+++A+ A ++P+G V V +KII+R NR + K +HAEI+AI+ Sbjct: 1 MYRDDYFLKEAVKQAKKALSIGDVPIGCVIVFEDKIIARGYNRRNKDKSTLSHAEIIAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ + L + +Y+TLEPC MCA AI +RI+R GA NPK G + Sbjct: 61 KACKKMGDWRLEDCTMYITLEPCPMCAGAIVQSRIKRAVLGAMNPKAGCAGSVLNILQTD 120 Query: 121 TCHHSPEIYPGI----SEQRSRQIIQDFFKERR 149 +H E+ I + ++ FFK R Sbjct: 121 GFNHKTEVEL-ISCESLKNECSLLLSSFFKSLR 152 >gi|207743199|ref|YP_002259591.1| cytosine/adenosine deaminase protein [Ralstonia solanacearum IPO1609] gi|206594596|emb|CAQ61523.1| cytosine/adenosine deaminase protein [Ralstonia solanacearum IPO1609] Length = 178 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL +A+ A E+PVGAV V N+I+ N D +AHAE+ A+R Sbjct: 12 ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LPE +++VTLEPC MCA A+ AR+ R+ YGA +PK G + + Sbjct: 72 AAVTLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I + Q +++ FF ERR Sbjct: 132 LNHQTAILGSVLAQECGDMLRAFFAERR 159 >gi|89094120|ref|ZP_01167063.1| hypothetical protein MED92_16295 [Oceanospirillum sp. MED92] gi|89081595|gb|EAR60824.1| hypothetical protein MED92_16295 [Oceanospirillum sp. MED92] Length = 168 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 85/148 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +M ALE A A NE+PVGA+ VL+ +++ N D TAHAE++A+R Sbjct: 5 KTDLHWMERALELADRAEQLNEVPVGALVVLDGEVVGEGWNHPISGNDPTAHAEMMALRA 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + L +L+VT+EPCTMC+ AI ARI+R+ YGA+ K G +++ Q ++ Sbjct: 65 AAQKVGNYRLVGAELFVTIEPCTMCSGAIVHARIKRVIYGATEAKSGAVDSNCQLFSQPW 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ +R + I FF+ RR Sbjct: 125 INHDVEITRGVLAERCSKKISAFFQRRR 152 >gi|296314748|ref|ZP_06864689.1| tRNA-specific adenosine deaminase [Neisseria polysaccharea ATCC 43768] gi|296838389|gb|EFH22327.1| tRNA-specific adenosine deaminase [Neisseria polysaccharea ATCC 43768] Length = 239 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 90 EEMEHFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSCHAEINALAQ 149 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L D+Y+TLEPC MCA+A+ ARI+R+ YGA+ PK G + + Sbjct: 150 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIKRVIYGAAEPKTGAAGSIVNLFADKR 209 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + I GI ++ R ++ FF+ +R Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237 >gi|315033440|gb|EFT45372.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0017] Length = 173 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +FM A+ EA+ A E+P+GAV V +II R N ++ TAHAE+ AI+ Sbjct: 11 EEKELFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQE 70 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 CR + L E L+VTLEPC MC+ A+ LARI +YYGA++PK G Sbjct: 71 ACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDER 130 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R ++ FFK+ R Sbjct: 131 FNHVAYVEAGVLEEECRLLLVQFFKKLR 158 >gi|293399195|ref|ZP_06643360.1| cytosine deaminase [Neisseria gonorrhoeae F62] gi|291610609|gb|EFF39719.1| cytosine deaminase [Neisseria gonorrhoeae F62] Length = 239 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 90 EEMGYFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 149 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + Sbjct: 150 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGATEPKTGAAGSIVNLFADKR 209 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + I GI ++ R ++ FF+ +R Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237 >gi|229845957|ref|ZP_04466069.1| hypothetical protein CGSHi7P49H1_03883 [Haemophilus influenzae 7P49H1] gi|229810961|gb|EEP46678.1| hypothetical protein CGSHi7P49H1_03883 [Haemophilus influenzae 7P49H1] Length = 159 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A A EIPVGAV V + + II N + D TAHAEI+A+R G + + Sbjct: 1 MRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPCTMCA AI +RI+RL +GAS+ K G I + F+ +H+ Sbjct: 61 QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ + Q + FF++RR Sbjct: 121 EITSGVLAEECSQKLSTFFQKRR 143 >gi|229552943|ref|ZP_04441668.1| nucleoside deaminase [Lactobacillus rhamnosus LMS2-1] gi|229313687|gb|EEN79660.1| nucleoside deaminase [Lactobacillus rhamnosus LMS2-1] Length = 170 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 61/145 (42%), Positives = 80/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N +M AL EA+ AA E+P+GAV V + +II R N +D T HAEILAI+ CR Sbjct: 9 NQYMIAALVEAKKAAAIGEVPIGAVVVHDQQIIGRGYNLRETTQDATQHAEILAIQAACR 68 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + L+VTLEPC MCA A+ ARI Y+GA++PK G +H Sbjct: 69 QLGTWRLEDCSLFVTLEPCPMCAGAMINARIATCYFGATDPKAGVAGTFYNLLEDTRFNH 128 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + PGI S ++QDFF+ R Sbjct: 129 QVAVVPGIQATASAALLQDFFRAIR 153 >gi|17546170|ref|NP_519572.1| hydrolase [Ralstonia solanacearum GMI1000] gi|17428466|emb|CAD15153.1| putative cytosine/adenosine deaminase protein [Ralstonia solanacearum GMI1000] Length = 183 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL +A+ A E+PVGAV V N+I+ N D +AHAE+ A+R Sbjct: 17 ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LPE +++VTLEPC MCA A+ AR+ R+ YGA +PK G + + Sbjct: 77 AAVRLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I + Q +++ FF ERR Sbjct: 137 LNHQTAIIGSVLAQDCGDMLRAFFAERR 164 >gi|256961376|ref|ZP_05565547.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Merz96] gi|293383665|ref|ZP_06629574.1| tRNA-specific adenosine deaminase [Enterococcus faecalis R712] gi|293387223|ref|ZP_06631781.1| tRNA-specific adenosine deaminase [Enterococcus faecalis S613] gi|312906213|ref|ZP_07765225.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis DAPTO 512] gi|312909559|ref|ZP_07768414.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis DAPTO 516] gi|256951872|gb|EEU68504.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Merz96] gi|291079001|gb|EFE16365.1| tRNA-specific adenosine deaminase [Enterococcus faecalis R712] gi|291083361|gb|EFE20324.1| tRNA-specific adenosine deaminase [Enterococcus faecalis S613] gi|310627859|gb|EFQ11142.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis DAPTO 512] gi|311290232|gb|EFQ68788.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis DAPTO 516] Length = 173 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +FM A+ EA+ A E+P+GAV V +II R N ++ TAHAE+ AI+ Sbjct: 11 EEKEIFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQE 70 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 CR + L E L+VTLEPC MC+ A+ LARI +YYGA++PK G Sbjct: 71 ACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDER 130 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R ++ FFK+ R Sbjct: 131 FNHVAYVEAGVLEEECRLLLVQFFKKLR 158 >gi|209558752|ref|YP_002285224.1| Cytosine deaminase [Streptococcus pyogenes NZ131] gi|209539953|gb|ACI60529.1| Cytosine deaminase [Streptococcus pyogenes NZ131] Length = 171 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 5 LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 65 EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ I+Q FF++ R Sbjct: 125 RLNHRVQVERGLLAADCANIMQTFFRQGR 153 >gi|55823732|ref|YP_142173.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus thermophilus CNRZ1066] gi|55739717|gb|AAV63358.1| cytidine/deoxycytidylate deaminase family protein, putative [Streptococcus thermophilus CNRZ1066] Length = 172 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 85/148 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +FMS AL+EAQ + + EIP+G V V + +I+ R N EL HAE++AI+ Sbjct: 7 EEKEIFMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAEVMAIQE 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + L + L+VT+EPC MC+ AI LARI ++ YGA N K GG + Sbjct: 67 ANRTVGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDER 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E +I+QDFF++ R Sbjct: 127 LNHRVEVETGIMEVDCAKIMQDFFRQSR 154 >gi|332830410|gb|EGK03038.1| hypothetical protein HMPREF9455_01288 [Dysgonomonas gadei ATCC BAA-286] Length = 147 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 81/147 (55%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL EAQ A + E+P+GAV V N+II+RA N L DVTAHAE+ AI Sbjct: 6 TDEHYMRQALNEAQIAFEKKEVPIGAVIVCQNRIIARAHNLTETLNDVTAHAEMQAITAA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L LYVTLEPC MCA + ++I ++ +GA + K G ++ Sbjct: 66 ANFLGGKYLTNCTLYVTLEPCPMCAGGLLWSQIPKVVFGAKDEKKG-----YSLFSPNIL 120 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H+ I GI E+ ++++FF+++R Sbjct: 121 HNKTSIISGILEEECAFLLKEFFRQKR 147 >gi|283131328|dbj|BAI63333.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae subsp. equisimilis] Length = 183 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 13 LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 73 EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 132 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + I+Q FF++ R Sbjct: 133 RLNHRVQVERGLLAEDCANIMQTFFRQGR 161 >gi|58336712|ref|YP_193297.1| cytidine-deoxycytidylate deaminase [Lactobacillus acidophilus NCFM] gi|58254029|gb|AAV42266.1| cytidine-deoxycytidylate deaminase [Lactobacillus acidophilus NCFM] Length = 168 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+++A+ A + E+P+GAV V KII NR +D T HAE++AI+ C+ Sbjct: 10 YMQLAIDKAKEAEKQGEVPIGAVVVDPTGKIIGTGYNRRELDEDSTQHAEMIAIKEACKN 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + + + +H Sbjct: 70 LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFAVERFNHH 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P G+ + Q+++DFF+ R Sbjct: 130 PHAIRGLYRDQCAQMLKDFFRAIR 153 >gi|81427949|ref|YP_394948.1| putative cytidine deaminase [Lactobacillus sakei subsp. sakei 23K] gi|78609590|emb|CAI54636.1| Putative cytidine deaminase [Lactobacillus sakei subsp. sakei 23K] Length = 172 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 52/141 (36%), Positives = 77/141 (54%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + +M A++EA A + E+P+GAV V + +II R N +D T HAEI+AI+ C Sbjct: 9 DQWMQVAIDEANQARIIGEVPIGAVIVKDGQIIGRGHNIREHAQDATLHAEIIAIQEACM 68 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L + ++VTLEPC MCA AI +RI +Y+GAS+PK G T +H Sbjct: 69 VEKSWRLEDTAIFVTLEPCPMCAGAIINSRIPNVYFGASDPKAGVTGTLMNLLTDKRFNH 128 Query: 125 SPEIYPGISEQRSRQIIQDFF 145 + G+ E ++Q FF Sbjct: 129 QATVVAGVREAECAALLQTFF 149 >gi|229545278|ref|ZP_04434003.1| nucleoside deaminase [Enterococcus faecalis TX1322] gi|229309628|gb|EEN75615.1| nucleoside deaminase [Enterococcus faecalis TX1322] Length = 173 Score = 209 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM A+ EA+ A E+P+GAV V +II R N ++ TAHAE+ AI+ Sbjct: 11 EEKEFFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQE 70 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 CR + L E L+VTLEPC MC+ A+ LARI +YYGA++PK G Sbjct: 71 ACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDER 130 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R ++ FFK R Sbjct: 131 FNHVAYVEAGVLEEECRLLLVQFFKRLR 158 >gi|257416518|ref|ZP_05593512.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis AR01/DG] gi|257158346|gb|EEU88306.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ARO1/DG] Length = 173 Score = 209 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM A+ EA+ A E+P+GAV V +II R N ++ T+HAE+ AI+ Sbjct: 11 EEKEFFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATSHAEMYAIQE 70 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 CR + L E L+VTLEPC MC+ A+ LARI +YYGA++PK G Sbjct: 71 ACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDER 130 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R ++ FFK+ R Sbjct: 131 FNHVAYVEAGVLEEECRLLLVQFFKKLR 158 >gi|239930296|ref|ZP_04687249.1| cytidine/deoxycytidine deaminase [Streptomyces ghanaensis ATCC 14672] gi|291438644|ref|ZP_06578034.1| cytidine/deoxycytidine deaminase [Streptomyces ghanaensis ATCC 14672] gi|291341539|gb|EFE68495.1| cytidine/deoxycytidine deaminase [Streptomyces ghanaensis ATCC 14672] Length = 161 Score = 209 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 2/143 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL+EA+ A ++PVGAV + + +++R N D TAHAE+LA+R Sbjct: 19 MRLALDEAERAVRGGDVPVGAVVLAPDGTTVLARGHNEREAAGDPTAHAEVLAVRRAAAE 78 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L Q L L VTLEPCTMCA AI AR+ R+ YGA + K G + +H Sbjct: 79 LGQWRLAGCTLVVTLEPCTMCAGAIQQARVDRVVYGARDEKAGAAGSLWDLLRDRRLNHR 138 Query: 126 PEIYPGISEQRSRQIIQDFFKER 148 PE+ G+ + +++ +FF+ER Sbjct: 139 PEVVEGVLAEECARLLTEFFRER 161 >gi|295692237|ref|YP_003600847.1| tRNA-specific adenosine deaminase [Lactobacillus crispatus ST1] gi|295030343|emb|CBL49822.1| tRNA-specific adenosine deaminase [Lactobacillus crispatus ST1] Length = 166 Score = 209 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 50/149 (33%), Positives = 85/149 (57%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A+++A+ A + E+P+GAV V + +++ NR +D T HAE++AI+ Sbjct: 5 EDKRKYMQLAIDQAKEAEKQGEVPIGAVVVDPDGRVVGTGYNRRELDEDATQHAEMIAIK 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + +++ Sbjct: 65 EACSKLGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFSVE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P G+ + Q+++DFF+ R Sbjct: 125 KFNHHPHAIRGLYRDQCAQMLKDFFRAIR 153 >gi|76799055|ref|ZP_00781248.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae 18RS21] gi|76585592|gb|EAO62157.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae 18RS21] Length = 168 Score = 209 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM+ AL+ A+++ + EIP+G V V + II R N E HAEI+AI Sbjct: 7 EEKEWFMTEALKXAKSSLEKEEIPIGCVIVKDGHIIGRGHNAREEFNKAILHAEIMAINN 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L + L+VT+EPC MC+ AI LARI + YGA N K G + + + Sbjct: 67 ANEKVGNWRLLDTTLFVTVEPCVMCSGAIGLARIPHVIYGAKNTKFGAAGSLYDILSDSR 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E + +I+QDFF++ R Sbjct: 127 LNHRVEVETGILEDQCAKIMQDFFRKGR 154 >gi|145298514|ref|YP_001141355.1| cytosine/adenosine deaminase [Aeromonas salmonicida subsp. salmonicida A449] gi|142851286|gb|ABO89607.1| cytosine/adenosine deaminase [Aeromonas salmonicida subsp. salmonicida A449] Length = 199 Score = 209 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 75/148 (50%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A+ A A EIPVGAV VL ++++ GNR+ D AHAEI+AIR Sbjct: 34 EQDERWMRHAMALAARAEGIGEIPVGAVLVLGDEVVGEGGNRSISEHDACAHAEIMAIRA 93 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 94 AGARLENYRLIDTVLYVTLEPCCMCAGALIHSRVKRVVFGARDLKTGAAGSVFDILQDPR 153 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + FFK RR Sbjct: 154 HNHRVSLTGGVLADACSAQLSAFFKRRR 181 >gi|257899803|ref|ZP_05679456.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com15] gi|293571142|ref|ZP_06682180.1| tRNA-specific adenosine deaminase [Enterococcus faecium E980] gi|257837715|gb|EEV62789.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com15] gi|291608755|gb|EFF38039.1| tRNA-specific adenosine deaminase [Enterococcus faecium E980] Length = 165 Score = 209 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 52/143 (36%), Positives = 76/143 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL EA+ A + +E+P+GAV VL ++I + N +D T HAE+LAI+ Sbjct: 10 DKEKWMRLALAEAKKAEVLHEVPIGAVVVLEGEVIGKGYNLRETTQDATTHAEMLAIKEA 69 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C + L L+VTLEPC MC+ A+ L+R+ +Y+GA +PKGG Sbjct: 70 CEKVGSWRLENASLFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERF 129 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 +H + GI E I+ DFF Sbjct: 130 NHQAYVEGGILEDECGMILTDFF 152 >gi|227552392|ref|ZP_03982441.1| nucleoside deaminase [Enterococcus faecium TX1330] gi|257888367|ref|ZP_05668020.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,141,733] gi|257896743|ref|ZP_05676396.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com12] gi|293378075|ref|ZP_06624251.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium PC4.1] gi|227178480|gb|EEI59452.1| nucleoside deaminase [Enterococcus faecium TX1330] gi|257824421|gb|EEV51353.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,141,733] gi|257833308|gb|EEV59729.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com12] gi|292643330|gb|EFF61464.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecium PC4.1] Length = 171 Score = 209 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 51/143 (35%), Positives = 77/143 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL EA+ A + +E+P+GAV VL ++I + N +D T HAE+LAI+ Sbjct: 10 DKEKWMRLALAEAKKAEVLHEVPIGAVVVLEGEVIGKGYNLRETTQDATTHAEMLAIKEA 69 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C + L L+VTLEPC MC+ A+ L+R+ +Y+GA +PKGG Sbjct: 70 CEKVGSWRLENASLFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERF 129 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 +H + GI E +++ DFF Sbjct: 130 NHQAYVEGGILEDECGRVLTDFF 152 >gi|156973452|ref|YP_001444359.1| hypothetical protein VIBHAR_01142 [Vibrio harveyi ATCC BAA-1116] gi|156525046|gb|ABU70132.1| hypothetical protein VIBHAR_01142 [Vibrio harveyi ATCC BAA-1116] Length = 164 Score = 209 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 55/142 (38%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+E A+ A E+PVGAV V + +II+ NR+ D TAHAEI +R L Sbjct: 1 MRRAMELAEQAEAEGEVPVGAVLVKDGEIIAEGWNRSICAHDATAHAEIQTLRKAGEALG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +R++R+ YGA + K G + +H Sbjct: 61 NYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVYGAPDLKAGAAGTVLNLFESQAAYHYAT 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R +Q FFK RR Sbjct: 121 VENGLLEEECRSQLQAFFKRRR 142 >gi|50913560|ref|YP_059532.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS10394] gi|71902843|ref|YP_279646.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS6180] gi|94987813|ref|YP_595914.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS9429] gi|94989691|ref|YP_597791.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS10270] gi|94991689|ref|YP_599788.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS2096] gi|94993570|ref|YP_601668.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS10750] gi|306828137|ref|ZP_07461400.1| cytidine/deoxycytidylate deaminase [Streptococcus pyogenes ATCC 10782] gi|50902634|gb|AAT86349.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS10394] gi|71801938|gb|AAX71291.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS6180] gi|94541321|gb|ABF31370.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS9429] gi|94543199|gb|ABF33247.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS10270] gi|94545197|gb|ABF35244.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS2096] gi|94547078|gb|ABF37124.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS10750] gi|304429674|gb|EFM32720.1| cytidine/deoxycytidylate deaminase [Streptococcus pyogenes ATCC 10782] Length = 179 Score = 209 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 13 LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 73 EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 132 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ I+Q FF++ R Sbjct: 133 RLNHRVQVERGLLAADCANIMQTFFRQGR 161 >gi|283131371|dbj|BAI63375.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae subsp. equisimilis] gi|283131431|dbj|BAI63432.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae subsp. equisimilis] Length = 183 Score = 209 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 13 LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + ++VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 73 EANAYEGNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDE 132 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + I+Q FF++ R Sbjct: 133 RLNHRVQVERGLLAEDCANIMQTFFRQGR 161 >gi|39995176|ref|NP_951127.1| cytidine/deoxycytidylate deaminase family protein [Geobacter sulfurreducens PCA] gi|39981938|gb|AAR33400.1| cytidine/deoxycytidylate deaminase family protein [Geobacter sulfurreducens PCA] gi|307634647|gb|ADI82903.2| tRNA (adenosine-34) deaminase [Geobacter sulfurreducens KN400] Length = 179 Score = 209 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M A+ EA AA R+E+P+GAV V + +I R N D +AHAE++AIR Sbjct: 9 IRDDAYWMGKAIREAAKAAARDEVPIGAVIVRDGAVIGRGHNLREGSNDPSAHAEMIAIR 68 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L LYVTLEPC MC AI LAR+ R+ +G +PKGG + Sbjct: 69 QAARRSANWRLTGATLYVTLEPCLMCMGAIILARLERVVFGCYDPKGGAAGSLYDLSADP 128 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + PG+ ++ ++ DFF++ R Sbjct: 129 RLNHQVRLSPGVCQEECGTMLSDFFRDLR 157 >gi|158424013|ref|YP_001525305.1| cytidine and deoxycytidylate deaminase family protein [Azorhizobium caulinodans ORS 571] gi|158330902|dbj|BAF88387.1| cytidine and deoxycytidylate deaminase family protein [Azorhizobium caulinodans ORS 571] Length = 147 Score = 209 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 83/145 (57%), Positives = 108/145 (74%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL EA+ AA R E+PVGAV V N+++I+R GNR REL D TAHAE+ +R G + Sbjct: 3 ETFMQTALSEARAAAERGEVPVGAVLVRNSQVIARDGNRTRELSDPTAHAEMQVLRAGAK 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L E L DLYVTLEPC MCA AIS ARIRRLYYGA +PKGG +++G +F+T TCHH Sbjct: 63 ALGAERLLTCDLYVTLEPCAMCAGAISFARIRRLYYGALDPKGGAVDSGPRFFTQPTCHH 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 +P++Y GI+E+ S +I+++FF+ RR Sbjct: 123 APDVYGGIAERHSAEILRNFFQARR 147 >gi|308389629|gb|ADO31949.1| cytidine and deoxycytidylate deaminase family protein [Neisseria meningitidis alpha710] Length = 239 Score = 209 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 90 EEMEHFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSCHAEINALAQ 149 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + Sbjct: 150 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 209 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + I GI ++ R ++ FF+ +R Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237 >gi|209694336|ref|YP_002262264.1| tRNA-specific adenosine deaminase [Aliivibrio salmonicida LFI1238] gi|208008287|emb|CAQ78433.1| tRNA-specific adenosine deaminase [Aliivibrio salmonicida LFI1238] Length = 177 Score = 209 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 57/144 (39%), Positives = 80/144 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +M A+E A A E+PVGAV VLN +II NR+ D TAHAE++AI+ Sbjct: 8 KSATFYMQRAIELASIAEGEGEVPVGAVIVLNGEIIGEGWNRSIGTHDATAHAEMMAIKQ 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + L LYVTLEPC MCA AI +RI+++++GA++ K G + +T AT Sbjct: 68 AGQTVENYRLVNATLYVTLEPCPMCAGAIVQSRIKQVFFGAADLKTGASGSVINLFTAAT 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 H E G+ R+ +Q FF Sbjct: 128 AFHFVECESGLMADECREQLQAFF 151 >gi|125624632|ref|YP_001033115.1| hypothetical protein llmg_1843 [Lactococcus lactis subsp. cremoris MG1363] gi|124493440|emb|CAL98414.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071423|gb|ADJ60823.1| hypothetical protein LLNZ_09485 [Lactococcus lactis subsp. cremoris NZ9000] Length = 155 Score = 209 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 63/148 (42%), Positives = 88/148 (59%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM+ AL+EAQ AA E+P+G V V + +II+R NR T HAE+ AI Sbjct: 6 EEKEFFMTEALKEAQKAAENEEVPIGVVIVKDGEIIARDFNRRELDGRATHHAEVCAIEA 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + L + L+VT+EPC MCA AI LARI ++Y+GA+NPK GG + Q Sbjct: 66 ANQAVGNWRLLDCALFVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQILEDKR 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ GI E S +I+QDFFK RR Sbjct: 126 LNHRVQVESGILEYESAKIMQDFFKNRR 153 >gi|315500440|ref|YP_004089243.1| cmp/dcmp deaminase zinc-binding protein [Asticcacaulis excentricus CB 48] gi|315418452|gb|ADU15092.1| CMP/dCMP deaminase zinc-binding protein [Asticcacaulis excentricus CB 48] Length = 162 Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 67/149 (44%), Positives = 99/149 (66%), Gaps = 2/149 (1%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIR 60 M AL+EA+ AA E+P+GA+ + II+RA N +L D +AHAEILA+R Sbjct: 2 TDKTLMRLALDEAEKAAQAGEVPIGALIYDPSSKTIIARAKNAPIKLNDPSAHAEILALR 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +++ L ++ +YVTLEPC MCA A+S ARI R+ YGAS+PKGG +E+G +F+ Sbjct: 62 AAGQVVGNYRLTDLWIYVTLEPCVMCAGALSHARIGRVIYGASDPKGGAVESGPRFFAQP 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCH +PE+ G+ E + Q+++DFF++RR Sbjct: 122 TCHWAPEVTGGVLEAETGQVLKDFFRQRR 150 >gi|227820996|ref|YP_002824966.1| putative cytidine and deoxycytidylate deaminase [Sinorhizobium fredii NGR234] gi|227339995|gb|ACP24213.1| putative cytidine and deoxycytidylate deaminase [Sinorhizobium fredii NGR234] Length = 150 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 83/149 (55%), Positives = 109/149 (73%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M AL+EA+ AA R E+P+GAV VL+ ++++ AGNR REL+D+TAHAEI AIR Sbjct: 2 MAETTRYMDAALDEARKAAARGEVPIGAVVVLDGEVVAAAGNRTRELRDITAHAEIEAIR 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + E L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG +ENG +FY Sbjct: 62 QAAAAVGDERLSGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVENGVRFYGSP 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCHH P++Y G++E+ + +++ FF RR Sbjct: 122 TCHHVPDVYSGLAEREAADLLRAFFTARR 150 >gi|225016548|ref|ZP_03705740.1| hypothetical protein CLOSTMETH_00455 [Clostridium methylpentosum DSM 5476] gi|224950657|gb|EEG31866.1| hypothetical protein CLOSTMETH_00455 [Clostridium methylpentosum DSM 5476] Length = 254 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 56/138 (40%), Positives = 74/138 (53%), Gaps = 1/138 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALE+A AA E+PVGAV V +++++A NR K+ AHAE+LAI CR L Sbjct: 1 MRLALEQAARAAELGEVPVGAVLVRGGEVVAQAYNRRETDKNALAHAELLAIDQACRALG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L LYVTLEPC MC AI ARI + YGA + K G + +H P+ Sbjct: 61 GWRLFGATLYVTLEPCPMCTGAIINARIDHVVYGAKDQKAGSCGSVIDLTEYPY-NHKPQ 119 Query: 128 IYPGISEQRSRQIIQDFF 145 + G+ EQ ++ FF Sbjct: 120 LTGGVLEQECAGMLSQFF 137 >gi|30248454|ref|NP_840524.1| cytidine and deoxycytidylate deaminase zinc-binding region [Nitrosomonas europaea ATCC 19718] gi|30138340|emb|CAD84348.1| Cytidine and deoxycytidylate deaminase zinc-binding region [Nitrosomonas europaea ATCC 19718] Length = 167 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 73/148 (49%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL+ A+ A E+PVGAV V ++I+ N D TAHAEI A+R Sbjct: 12 TEDEYFMRQALDLARVAGAAGEVPVGAVMVRESRIVGCGHNCPVTTVDPTAHAEIRALRD 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + LP LYVTLEPC MC A+ ARI RL Y A++PK G + Sbjct: 72 AASRVGNYRLPGCTLYVTLEPCVMCIGAMFHARITRLVYAANDPKTGVCGSLLDLPADTR 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + +++ FF +R Sbjct: 132 LNHHLMVSQGVLADEAGTLLKQFFIAKR 159 >gi|90416322|ref|ZP_01224254.1| cytidine/deoxycytidylate deaminase family protein [marine gamma proteobacterium HTCC2207] gi|90332047|gb|EAS47261.1| cytidine/deoxycytidylate deaminase family protein [marine gamma proteobacterium HTCC2207] Length = 160 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM A+E A AA E+PVGA+ V ++I N+ D T HAEI+A+R Sbjct: 1 MSLDEEFMGRAMELAHQAAAVGEVPVGALVVKEGRVIGEGYNQPITSCDPTGHAEIIAMR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L DLYVT+EPCTMC A+ ARI ++ +GA P+ G +E+ + + Sbjct: 61 NAAQTLGNYRLSGCDLYVTIEPCTMCVGAMVHARIGKIVFGAKEPRAGALESQLRLMDES 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +HS E G+ ++ I+ FF+ +R Sbjct: 121 HYNHSIEWQGGVLAEQCGAIMSGFFRAKR 149 >gi|283131444|dbj|BAI63444.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae subsp. equisimilis] Length = 183 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 13 LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + ++VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 73 EANAHEGNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDE 132 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + I+Q FF++ R Sbjct: 133 RLNHRVQVERGLLAEDCANIMQTFFRQGR 161 >gi|255994527|ref|ZP_05427662.1| tRNA-specific adenosine deaminase [Eubacterium saphenum ATCC 49989] gi|255993240|gb|EEU03329.1| tRNA-specific adenosine deaminase [Eubacterium saphenum ATCC 49989] Length = 151 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 64/145 (44%), Positives = 83/145 (57%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM ALEEA+ A + E+PVGAV V N K+IS+A N R+ K+ AHAEILAI C+ Sbjct: 3 EDFMRVALEEAKKAYKQGEVPVGAVIVKNGKVISKAHNETRQKKNAVAHAEILAIDKACK 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L E L + ++YVTLEPC MCA AI ARI + G + K G +H Sbjct: 63 KLENERLVDTEMYVTLEPCAMCAGAIVQARIPEVMIGTRDLKSGAANTILNVLENEKLNH 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ GI E+ +I++ FFKE R Sbjct: 123 RAELRFGIFEEECSEILKTFFKELR 147 >gi|21909689|ref|NP_663957.1| putative cytidine/deoxycytidylate deaminase family protein [Streptococcus pyogenes MGAS315] gi|56807966|ref|ZP_00365780.1| COG0590: Cytosine/adenosine deaminases [Streptococcus pyogenes M49 591] gi|73921034|sp|Q8K8Q9|TADA_STRP3 RecName: Full=tRNA-specific adenosine deaminase gi|73921083|sp|Q5XE14|TADA_STRP6 RecName: Full=tRNA-specific adenosine deaminase gi|21903872|gb|AAM78760.1| putative cytidine/deoxycytidylate deaminase family protein [Streptococcus pyogenes MGAS315] Length = 171 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 5 LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 65 EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ I+Q FF++ R Sbjct: 125 RLNHRVQVERGLLAADCANIMQTFFRQGR 153 >gi|325577729|ref|ZP_08148004.1| tRNA-specific adenosine deaminase [Haemophilus parainfluenzae ATCC 33392] gi|325160474|gb|EGC72600.1| tRNA-specific adenosine deaminase [Haemophilus parainfluenzae ATCC 33392] Length = 172 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL A A EIPVGAV V + I+ N + D TAHAEI+A+R Sbjct: 6 DEKFMQHALMLADRAEALGEIPVGAVLVGDEGNILGEGWNLSIIENDPTAHAEIVALRNA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L LYVTLEPCTMCA AI +RI+RL +GAS+ K G + + F+ Sbjct: 66 AQNIQNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAVGSRFHFFDDYKM 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 +H+ EI G+ ++ Q + DFF Sbjct: 126 NHALEITSGVLAEKCGQKLSDFF 148 >gi|323128130|gb|ADX25427.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 175 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 5 LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + ++VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 65 EANAYEGNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + I+Q FF++ R Sbjct: 125 RLNHRVQVERGLLAEDCANIMQTFFRQGR 153 >gi|255975330|ref|ZP_05425916.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T2] gi|307281893|ref|ZP_07562108.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0860] gi|255968202|gb|EET98824.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T2] gi|306503847|gb|EFM73069.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX0860] Length = 173 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM A+ EA+ A E+P+G+V V +II R N ++ TAHAE+ AI+ Sbjct: 11 EEKEFFMREAIAEAKKAEGLAEVPIGSVIVRQGEIIGRGHNLREARQEATAHAEMYAIQE 70 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 CR + L E L+VTLEPC MC+ A+ LARI +YYGA++PK G Sbjct: 71 ACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDER 130 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R ++ FFK+ R Sbjct: 131 FNHVAYVEAGVLEEECRLLLVQFFKKLR 158 >gi|76789589|ref|YP_328675.1| tRNA-specific adenosine deaminase [Chlamydia trachomatis A/HAR-13] gi|237803276|ref|YP_002888470.1| Cytosine deaminase [Chlamydia trachomatis B/Jali20/OT] gi|237805197|ref|YP_002889351.1| Cytosine deaminase [Chlamydia trachomatis B/TZ1A828/OT] gi|76168119|gb|AAX51127.1| tRNA-specific adenosine deaminase [Chlamydia trachomatis A/HAR-13] gi|231273497|emb|CAX10413.1| Cytosine deaminase [Chlamydia trachomatis B/TZ1A828/OT] gi|231274510|emb|CAX11306.1| Cytosine deaminase [Chlamydia trachomatis B/Jali20/OT] Length = 163 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM AL+EA+ A ++E+PVG + V +KII+R N +LKD TAHAE++ I Sbjct: 3 IEKDLFFMKKALDEARKAYEQDEVPVGCIIVHGDKIIARGHNSVEQLKDSTAHAEMICIS 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L + LY TLEPC MCA AI LARI R+ +GA + + G + + Sbjct: 63 AAAEYLENWRLKDTILYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEK 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E G+ Q S Q++++FF E+R Sbjct: 123 HPFHQVECCSGVCYQESEQLMKNFFLEKR 151 >gi|331270688|ref|YP_004397180.1| CMP/dCMP deaminase, zinc-binding protein [Clostridium botulinum BKT015925] gi|329127238|gb|AEB77183.1| CMP/dCMP deaminase, zinc-binding protein [Clostridium botulinum BKT015925] Length = 147 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 1/145 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL+EA+ A + E+PVGAV V N K+I+ A N LKD TAHAEILAI+ C Sbjct: 3 EEFMKLALKEAEIAKNKEEVPVGAVIVKNGKVIASAHNLRETLKDPTAHAEILAIKKACG 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 IL L E ++YVTLEPC MC AI +RI+++Y G +P G + + Sbjct: 63 ILGNWRLSECEMYVTLEPCPMCTGAIIQSRIKKIYIGTFDPVAGCCGSVVDLAQNRYLNT 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ I ++ +I+ +FFK RR Sbjct: 123 MVDVTW-IYDKECSEILTNFFKNRR 146 >gi|239998824|ref|ZP_04718748.1| putative cytosine deaminase [Neisseria gonorrhoeae 35/02] gi|240014261|ref|ZP_04721174.1| putative cytosine deaminase [Neisseria gonorrhoeae DGI18] gi|240016697|ref|ZP_04723237.1| putative cytosine deaminase [Neisseria gonorrhoeae FA6140] gi|240121824|ref|ZP_04734786.1| putative cytosine deaminase [Neisseria gonorrhoeae PID24-1] gi|260440688|ref|ZP_05794504.1| putative cytosine deaminase [Neisseria gonorrhoeae DGI2] gi|268594667|ref|ZP_06128834.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae 35/02] gi|291043998|ref|ZP_06569714.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae DGI2] gi|268548056|gb|EEZ43474.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae 35/02] gi|291012461|gb|EFE04450.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae DGI2] gi|317164113|gb|ADV07654.1| putative cytosine deaminase [Neisseria gonorrhoeae TCDC-NG08107] Length = 239 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 90 EEMGYFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 149 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + Sbjct: 150 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 209 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + I GI ++ R ++ FF+ +R Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237 >gi|240112750|ref|ZP_04727240.1| putative cytosine deaminase [Neisseria gonorrhoeae MS11] gi|240115501|ref|ZP_04729563.1| putative cytosine deaminase [Neisseria gonorrhoeae PID18] gi|240123350|ref|ZP_04736306.1| putative cytosine deaminase [Neisseria gonorrhoeae PID332] gi|240128054|ref|ZP_04740715.1| putative cytosine deaminase [Neisseria gonorrhoeae SK-93-1035] gi|254493609|ref|ZP_05106780.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae 1291] gi|268598817|ref|ZP_06132984.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae MS11] gi|268601174|ref|ZP_06135341.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae PID18] gi|268681975|ref|ZP_06148837.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae PID332] gi|268686443|ref|ZP_06153305.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae SK-93-1035] gi|226512649|gb|EEH61994.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae 1291] gi|268582948|gb|EEZ47624.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae MS11] gi|268585305|gb|EEZ49981.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae PID18] gi|268622259|gb|EEZ54659.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae PID332] gi|268626727|gb|EEZ59127.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae SK-93-1035] Length = 239 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 90 EEMGYFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 149 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + Sbjct: 150 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 209 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + I GI ++ R ++ FF+ +R Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237 >gi|127512231|ref|YP_001093428.1| CMP/dCMP deaminase, zinc-binding [Shewanella loihica PV-4] gi|126637526|gb|ABO23169.1| tRNA-adenosine deaminase [Shewanella loihica PV-4] Length = 178 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 51/147 (34%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K +M A+ A A LR E+PVGA+ V ++ +I+ N + D +AHAE+ IR Sbjct: 17 KDEAYMRQAMALAAQAELRGEVPVGALLVKDDSVIATGYNLSICRHDASAHAEMECIRAA 76 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +++ L + LYVTLEPC MCA A+ ARI RL +GA++ K G + + Sbjct: 77 GQVMENYRLLDTTLYVTLEPCAMCAGAMVHARIGRLVFGAADLKTGAAGSVVDLVRSSAF 136 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + + + FF+ RR Sbjct: 137 NHQLEVTAGVLAEDCGEQLSAFFRRRR 163 >gi|300691564|ref|YP_003752559.1| tRNA-specific adenosine deaminase [Ralstonia solanacearum PSI07] gi|299078624|emb|CBJ51281.1| tRNA-specific adenosine deaminase [Ralstonia solanacearum PSI07] Length = 169 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL +A+ A E+PVGAV V N+I+ N D +AHAE+ A+R Sbjct: 5 ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LPE +++VTLEPC MCA A+ AR+ R+ YGA +PK G + + Sbjct: 65 AAVRLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I + Q +++ FF ERR Sbjct: 125 LNHQTAIIGSVLAQECGDMLRAFFAERR 152 >gi|300704191|ref|YP_003745793.1| tRNA-specific adenosine deaminase [Ralstonia solanacearum CFBP2957] gi|299071854|emb|CBJ43182.1| tRNA-specific adenosine deaminase [Ralstonia solanacearum CFBP2957] Length = 183 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL +A+ A E+PVGAV V N+I+ N D +AHAE+ A+R Sbjct: 17 ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LPE +++VTLEPC MCA A+ AR+ R+ YGA +PK G + + Sbjct: 77 AAVTLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + + Q +++ FF ERR Sbjct: 137 LNHQTAMLGSVLAQECGDMLRAFFAERR 164 >gi|283131399|dbj|BAI63401.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae subsp. equisimilis] Length = 175 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 5 LDEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 65 EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + I+Q FF++ R Sbjct: 125 RLNHRVQVERGLLAEDCANIMQTFFRQGR 153 >gi|291544028|emb|CBL17137.1| tRNA-adenosine deaminase [Ruminococcus sp. 18P13] Length = 151 Score = 208 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 3/149 (2%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+E A+ AA EIPVGA+ V + +++ R NR D TAHAE+LAIR Sbjct: 2 DDFAYMRQAMELAEQAAALGEIPVGALVVQDATGEVLGRGYNRREVDHDPTAHAEVLAIR 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L LYVTLEPC MC I AR+RR+ +GA + K G ++ + L Sbjct: 62 QAALAIGSWRLSGCTLYVTLEPCPMCCGTIINARVRRVVFGAYDSKAGSADSVINLFALP 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P + G+ E ++ +Q FF R Sbjct: 122 Y-NHKPAVTGGLLEDACKEQLQRFFSGLR 149 >gi|283131386|dbj|BAI63389.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae subsp. equisimilis] Length = 183 Score = 208 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 13 LDEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 73 EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDE 132 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + I+Q FF++ R Sbjct: 133 RLNHRVQVERGLLAEDCANIMQTFFRQGR 161 >gi|46370356|gb|AAS89964.1| deaminase [Agrobacterium vitis] Length = 149 Score = 208 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 86/149 (57%), Positives = 108/149 (72%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM ALEEA+ A R E+P+GAV V + I+++AGN R L+DVTAHAEILAIR Sbjct: 1 MTLTTRFMDVALEEARLAGARGEVPIGAVLVKDGVILAQAGNETRALQDVTAHAEILAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C IL E L DLYVTLEPCTMCAAAIS ARIRRLYYGA + KGGG+++G +FY+ Sbjct: 61 RACTILEDERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAPDEKGGGVDHGARFYSQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCHH+P++Y GI E + +++DFF +R Sbjct: 121 TCHHAPDVYAGIGETEAAALLKDFFTTKR 149 >gi|260102436|ref|ZP_05752673.1| tRNA-specific adenosine deaminase [Lactobacillus helveticus DSM 20075] gi|260083756|gb|EEW67876.1| tRNA-specific adenosine deaminase [Lactobacillus helveticus DSM 20075] Length = 168 Score = 208 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A+++A+ A + E+P+GAV V K+I NR +D T HAE++AI+ Sbjct: 6 DKKKYMELAIDQAKEAEKQGEVPIGAVVVDPEGKVIGTGYNRRELDEDSTQHAEMIAIKE 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + + + Sbjct: 66 ACHNLGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFEVEK 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P G+ + Q+++DFF+ R Sbjct: 126 FNHHPHSISGLYRDQCAQMLKDFFRAIR 153 >gi|291532344|emb|CBL05457.1| tRNA-adenosine deaminase [Megamonas hypermegale ART12/1] Length = 159 Score = 208 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 59/150 (39%), Positives = 83/150 (55%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59 +K M AL EA+ A EIP+GA+ + IISR N + D TAHAEI+AI Sbjct: 6 IKNDIEGMKEALIEAKKAFAIGEIPIGAIICDDKGNIISRGHNLREKTFDATAHAEIVAI 65 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R C L L ++ LYVT+EPC MCA AI +R++RL YGA++ + GG E+ Sbjct: 66 RKACTKLQNWRLSDLTLYVTVEPCPMCAGAIFSSRLKRLVYGATDWRAGGCESVFNIVNN 125 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I G+ E +++ FF+ RR Sbjct: 126 HWLNHQTQIRAGVLEDECSLLVKKFFQTRR 155 >gi|313204491|ref|YP_004043148.1| cmp/dcmp deaminase zinc-binding protein [Paludibacter propionicigenes WB4] gi|312443807|gb|ADQ80163.1| CMP/dCMP deaminase zinc-binding protein [Paludibacter propionicigenes WB4] Length = 158 Score = 208 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 60/146 (41%), Positives = 82/146 (56%), Gaps = 5/146 (3%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL EAQ A R+E+P+GAV V +II+R N L DVTAHAE+ AI Sbjct: 17 DEYFMRQALMEAQRAGERDEVPIGAVIVCQGRIIARGHNLTETLTDVTAHAEMQAITAAA 76 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L + L + LYVT+EPC MCA A+ ++I R+ YGAS+ K G + + H Sbjct: 77 QFLGGKYLIDCSLYVTVEPCVMCAGALGWSQISRVVYGASDEKRGFVR-----FAPNALH 131 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 EI GI E ++++ FFK +R Sbjct: 132 PKTEIVSGILEADCSKLVKKFFKRKR 157 >gi|71907824|ref|YP_285411.1| tRNA-adenosine deaminase [Dechloromonas aromatica RCB] gi|71847445|gb|AAZ46941.1| tRNA-adenosine deaminase [Dechloromonas aromatica RCB] Length = 146 Score = 208 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 56/142 (39%), Positives = 77/142 (54%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ A+ A E+PVGAV VLN +I+ R N D TAHAEI A+R R+L Sbjct: 1 MREAISLARAAECLGEVPVGAVVVLNGEIVGRGFNSPIGESDPTAHAEIAALRDAARVLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 LP +L+VTLEPC MCA AI +RI R+ YGA +PK G + + + +H Sbjct: 61 NYRLPGCELFVTLEPCAMCAGAIMHSRISRVIYGARDPKTGVHGSVVDLFGVERLNHHAT 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ + ++ FF RR Sbjct: 121 VEGGVLAEECSTLLSGFFASRR 142 >gi|222147690|ref|YP_002548647.1| cytidine and deoxycytidylate deaminase [Agrobacterium vitis S4] gi|221734678|gb|ACM35641.1| cytidine and deoxycytidylate deaminase [Agrobacterium vitis S4] Length = 149 Score = 208 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 89/149 (59%), Positives = 108/149 (72%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM ALEEAQ A R E+P+GAV V N I++RAGN R L+DVTAHAEILAIR Sbjct: 1 MTLTIRFMDVALEEAQLAGARGEVPIGAVLVKNGVILARAGNETRALQDVTAHAEILAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C IL E L DLYVTLEPCTMCAAAIS ARIRRLYYGA + KGGG+++G +FY+ Sbjct: 61 RACAILEDERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAPDEKGGGVDHGARFYSQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCHH+P++Y GI E + +++DFF +R Sbjct: 121 TCHHAPDVYAGIGETEAAALLKDFFTAKR 149 >gi|78188173|ref|YP_378511.1| cytosine deaminase, putative [Chlorobium chlorochromatii CaD3] gi|78170372|gb|ABB27468.1| tRNA-adenosine deaminase [Chlorobium chlorochromatii CaD3] Length = 153 Score = 208 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 59/150 (39%), Positives = 82/150 (54%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 M N FMS AL EA A + E+PVGAV + N II R N+ L D TAHAE++A+ Sbjct: 1 MIDFNTFMSAALREAIKAYEQREVPVGAVVLDSNGHIIGRGHNQVETLHDATAHAEMIAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L + L + L VT+EPC MCA AI A++ R+ +GA + K G Sbjct: 61 TAAMATLGNKYLDDCTLAVTMEPCPMCAGAIVNAKVGRVIFGAYDSKMGACGTVLNITGN 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE++ GI E + ++++Q FFK R Sbjct: 121 RVLNHQPEVFGGIMEHKCQELLQSFFKSLR 150 >gi|224824536|ref|ZP_03697643.1| CMP/dCMP deaminase zinc-binding [Lutiella nitroferrum 2002] gi|224603029|gb|EEG09205.1| CMP/dCMP deaminase zinc-binding [Lutiella nitroferrum 2002] Length = 242 Score = 208 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM+ A+ A+ AA E+PVGAV V +II R NR D +AHAE++A+R Sbjct: 92 EEAQRFMAEAIRLAKAAAAEGEVPVGAVVVKEGRIIGRGFNRPVTSHDPSAHAEMVALRE 151 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L DLYVTLEPC MC AI +R+ R+ YGA +PK G + + Sbjct: 152 AAATLGNYRLSGCDLYVTLEPCPMCGGAILHSRLDRVIYGARDPKIGAAGSVLNLFGERA 211 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ GI + +++ +FF++RR Sbjct: 212 LNHQTALFSGIEAEACGRLLSEFFRQRR 239 >gi|172036189|ref|YP_001802690.1| putative cytidine/deoxycytidylate deaminase [Cyanothece sp. ATCC 51142] gi|171697643|gb|ACB50624.1| putative cytidine/deoxycytidylate deaminase [Cyanothece sp. ATCC 51142] Length = 184 Score = 208 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 77/149 (51%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M AL+ A AA ++PVGAV + N II+ N + D T HAEI+AI Sbjct: 33 QTHCHWMRQALQLANKAAELGDVPVGAVIINHQNNIIAEGYNSKEQNHDPTGHAEIMAIH 92 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 IL L E LYVTLEPC MCA AI +R+ L YG +PK G I A Sbjct: 93 RASEILQSWHLEECTLYVTLEPCIMCAGAIIQSRLGLLVYGLDDPKSGSIRTVLNLPDSA 152 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E RQ ++D+F ++R Sbjct: 153 ASNHRLSVLSGILEDECRQQLRDWFTDKR 181 >gi|322515941|ref|ZP_08068882.1| tRNA-specific adenosine deaminase [Streptococcus vestibularis ATCC 49124] gi|322125615|gb|EFX96945.1| tRNA-specific adenosine deaminase [Streptococcus vestibularis ATCC 49124] Length = 172 Score = 208 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 83/148 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FMS AL+EAQ + + EIP+G V V + +I+ R N EL HAE++AI+ Sbjct: 7 EEKEFFMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAEVMAIQE 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + L + L+VT+EPC MC+ AI LARI ++ YGA N K GG + Sbjct: 67 ANRTVGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDER 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ + E +I+QDFF++ R Sbjct: 127 LNHRVEVETSVMEADCAKIMQDFFRQSR 154 >gi|254672230|emb|CBA05187.1| putative hydrolase protein [Neisseria meningitidis alpha275] Length = 197 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 48 EEMEHFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 107 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + Sbjct: 108 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 167 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + I GI ++ R ++ FF+ +R Sbjct: 168 LNTHTAIRGGILQEECRAVLSRFFQNKR 195 >gi|322434989|ref|YP_004217201.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp. MP5ACTX9] gi|321162716|gb|ADW68421.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp. MP5ACTX9] Length = 292 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 65/149 (43%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M F+ A+ EA+ A E+PVGAV VLNN+II+R NR D TAHAEI+A+R Sbjct: 1 MTPDEQFLREAIAEARAAEQAGEVPVGAVLVLNNEIIARGRNRVILDSDPTAHAEIVALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 RIL L DLY TLEPC MCA AI ARIRRL Y A++PK G + Sbjct: 61 EAGRILGNYRLENCDLYTTLEPCAMCAGAILHARIRRLIYAAADPKAGACGSALDVMNHP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + +++ FF+ RR Sbjct: 121 RLNHRMEVAVGLLAEECGEMLTSFFRTRR 149 >gi|315222391|ref|ZP_07864296.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus anginosus F0211] gi|315188552|gb|EFU22262.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus anginosus F0211] Length = 155 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL+EA+ A +EIP+G V V + KII N EL+ HAE++AI Sbjct: 6 EEKEEFMLEALKEAEIALANDEIPIGCVIVKDGKIIGHGHNAREELQRAVMHAEVMAIEE 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L+VT+EPC MC+ AI LARI ++ YGA N K G + T Sbjct: 66 ANAYEKSWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIYGAKNQKFGAAGSLYDILTDER 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E Q++QDFF++RR Sbjct: 126 LNHRVELENGILEAECAQMMQDFFRKRR 153 >gi|297193429|ref|ZP_06910827.1| deaminase [Streptomyces pristinaespiralis ATCC 25486] gi|297151779|gb|EDY67096.2| deaminase [Streptomyces pristinaespiralis ATCC 25486] Length = 176 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 52/142 (36%), Positives = 74/142 (52%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA AA ++PVGAV + I++ N D TAHAE+LAIR +L Sbjct: 31 MRLALGEADRAAQGGDVPVGAVVLSGEGTILAVGHNEREATGDPTAHAEVLAIRRAAAVL 90 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPCTMCA A+ +R+ R+ YGA + K G + +H P Sbjct: 91 GEWRLTGCTLVVTLEPCTMCAGALVQSRVARVVYGARDDKAGAAGSLWDVVRDRRLNHRP 150 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 E+ G+ + + + FF++R Sbjct: 151 EVVSGVLGEECSKQLTAFFRDR 172 >gi|167855119|ref|ZP_02477891.1| hypothetical protein HPS_06809 [Haemophilus parasuis 29755] gi|167853754|gb|EDS24996.1| hypothetical protein HPS_06809 [Haemophilus parasuis 29755] Length = 157 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 63/143 (44%), Positives = 76/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A EIPVGAV V II NR L D TAHAEI AIRM + L Sbjct: 1 MQYALSLADKAEAEGEIPVGAVLVDKTGNIIGEGWNRAIILSDPTAHAEIQAIRMAGQQL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPCTMCA AI +RI RL +GAS+ K G + + + +H Sbjct: 61 QNYRLLDTTLYVTLEPCTMCAGAILHSRIGRLVFGASDYKTGALGSRFHLFEDYKMNHFL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ Q I FF++RR Sbjct: 121 QIRGGVMANECSQKISAFFRKRR 143 >gi|77460805|ref|YP_350312.1| tRNA-adenosine deaminase [Pseudomonas fluorescens Pf0-1] gi|77384808|gb|ABA76321.1| putative deaminase [Pseudomonas fluorescens Pf0-1] Length = 165 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM ALE A A E+PVGAV V + +II R N D +AHAE++AIR Sbjct: 13 SRDRDFMREALELAAQGAALGEVPVGAVLVQDGEIIGRGFNCPISTSDPSAHAEMVAIRA 72 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + LP LYVTLEPC+MCA I +R+ R+ +GA PK G +++ QF+T Sbjct: 73 AAQAVDNYRLPGSTLYVTLEPCSMCAGLIVHSRVSRVVFGALEPKAGIVQSQGQFFTQGF 132 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 133 LNHRVLYEGGVLAEECGAVLTEFFRARR 160 >gi|295398379|ref|ZP_06808419.1| cytidine/deoxycytidylate deaminase [Aerococcus viridans ATCC 11563] gi|294973332|gb|EFG49119.1| cytidine/deoxycytidylate deaminase [Aerococcus viridans ATCC 11563] Length = 175 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 52/128 (40%), Positives = 72/128 (56%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+P+GAV V +II R N +D T HAEILAIR R + L + DLYVTLE Sbjct: 34 GEVPIGAVVVYQGEIIGRGHNLRETSQDATTHAEILAIREANRNRASWRLADADLYVTLE 93 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC+ A+ +RIR +Y+GA + KGG + +H E+ G+ + + ++ Sbjct: 94 PCPMCSGAMIQSRIRHVYFGAYDQKGGTAGTLMNLLDDSRFNHQVEVIGGVMHEECKALL 153 Query: 142 QDFFKERR 149 QDFF E R Sbjct: 154 QDFFIELR 161 >gi|326317008|ref|YP_004234680.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373844|gb|ADX46113.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 484 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 54/143 (37%), Positives = 74/143 (51%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL+EA AA R EIPVGAV V ++++R N D TAHAEI+A+R Sbjct: 19 DEDWMRVALQEAAEAAARGEIPVGAVVVRGGELVARGSNAPIAGHDPTAHAEIVALRAAA 78 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L L LYVTLEPC MC+ A+ AR+ R+ YGA + K G + + + Sbjct: 79 GRLGNYRLDGCTLYVTLEPCAMCSGAMLHARLDRVVYGAPDAKTGAAGSVVDLFAQPALN 138 Query: 124 HSPEIYPGISEQRSRQIIQDFFK 146 H I G+ Q ++ FF+ Sbjct: 139 HHTRIEGGVLAQECGALLSGFFQ 161 >gi|251783385|ref|YP_002997690.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242392017|dbj|BAH82476.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 175 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 5 LDEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + ++VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 65 EANAHEGNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + I+Q FF++ R Sbjct: 125 RLNHRVQVERGLLAEDCANIMQTFFRQGR 153 >gi|269962366|ref|ZP_06176716.1| zinc-binding domain protein [Vibrio harveyi 1DA3] gi|269832862|gb|EEZ86971.1| zinc-binding domain protein [Vibrio harveyi 1DA3] Length = 164 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 54/142 (38%), Positives = 75/142 (52%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+E A+ A E+PVGAV V + +I++ NR+ D TAHAEI +R L Sbjct: 1 MRRAMELAEQAEAEGEVPVGAVLVKDGEIVAEGWNRSICAHDATAHAEIQTLRKAGEALE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +R++R+ YGA + K G + +H Sbjct: 61 NYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVYGAPDLKAGAAGTVLNLFKSQAAYHYAT 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ E R +Q FFK RR Sbjct: 121 VESGLLEDECRSQLQAFFKRRR 142 >gi|85059758|ref|YP_455460.1| tRNA-specific adenosine deaminase [Sodalis glossinidius str. 'morsitans'] gi|84780278|dbj|BAE75055.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 169 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 75/147 (51%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 V+M AL A A E+PVGAV VLN II NR+ D TAHAEI+A+R G Sbjct: 6 SDEVWMRHALMLAGRAEAEGEVPVGAVLVLNGAIIGEGWNRSIGHHDPTAHAEIMALRQG 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L + LYVTLEPC MCA A+ ARI RL +GA + K G + Sbjct: 66 GQQAGNYRLLKATLYVTLEPCVMCAGAMIHARIGRLVFGARDEKTGAAGSLMDVLGHPGM 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ + Q + DFF+ RR Sbjct: 126 NHRIELTGDMLAQACAAQLSDFFRRRR 152 >gi|91776192|ref|YP_545948.1| tRNA-adenosine deaminase [Methylobacillus flagellatus KT] gi|91710179|gb|ABE50107.1| tRNA-adenosine deaminase [Methylobacillus flagellatus KT] Length = 168 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 59/146 (40%), Positives = 72/146 (49%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL+ AQ AAL E+PVGAV V + +I R N D +AHAEI A+R Sbjct: 12 DEDFMRIALQLAQEAALAGEVPVGAVVVKDGVVIGRGSNAPIAYHDPSAHAEIRAMRDAA 71 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L L LYVTLEPC MCA AI ARI RL +GA + K G + + Sbjct: 72 ARLGNYRLTGCALYVTLEPCAMCAGAIQHARIARLVFGAHDYKTGACGSVIDLMAEERLN 131 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ Q + FF ERR Sbjct: 132 HHTLVKSGVLVQECSATLTQFFAERR 157 >gi|159794935|pdb|2NX8|A Chain A, The Crystal Structure Of The Trna-Specific Adenosine Deaminase From Streptococcus Pyogenes Length = 179 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 81/149 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+E++ + + EIP+G V V + +II R N E HAE++AI Sbjct: 13 LEEQTYFMQEALKESEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGASN K GG+++ Q T Sbjct: 73 EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGVDSLYQILTDE 132 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ I+Q FF++ R Sbjct: 133 RLNHRVQVERGLLAADCANIMQTFFRQGR 161 >gi|19745357|ref|NP_606493.1| hypothetical protein spyM18_0196 [Streptococcus pyogenes MGAS8232] gi|73921072|sp|Q8P2R7|Y196_STRP8 RecName: Full=Uncharacterized deaminase spyM18_0196 gi|19747462|gb|AAL96992.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] Length = 159 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 5 LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 65 EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ I+Q FF++ R Sbjct: 125 RLNHRVQVERGLLAADCANIMQTFFRQGR 153 >gi|15605579|ref|NP_220365.1| cytosine deaminase [Chlamydia trachomatis D/UW-3/CX] gi|3329316|gb|AAC68441.1| cytosine deaminase [Chlamydia trachomatis D/UW-3/CX] gi|297748972|gb|ADI51518.1| tRNA-specific adenosine deaminase [Chlamydia trachomatis D-EC] gi|297749852|gb|ADI52530.1| tRNA-specific adenosine deaminase [Chlamydia trachomatis D-LC] Length = 163 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 84/149 (56%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM AL+EA+ A ++E+PVG + V +KII+R N +LKD T HAE++ I Sbjct: 3 IEKDLFFMKKALDEARKAYEQDEVPVGCIIVHGDKIIARGHNSVEQLKDPTVHAEMICIS 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L + LY TLEPC MCA AI LARI R+ +GA + + G + + Sbjct: 63 AAAEYLENWRLKDTILYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEK 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E G+ Q S Q++++FF E+R Sbjct: 123 HPFHQVECCSGVCYQESEQLMKNFFLEKR 151 >gi|218768019|ref|YP_002342531.1| putative cytosine deaminase [Neisseria meningitidis Z2491] gi|121052027|emb|CAM08336.1| putative cytosine deaminase [Neisseria meningitidis Z2491] Length = 239 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 90 EEMEHFMCEALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 149 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + L D+Y+TLEPC MCA+A+ AR++R+ YGA PK G + + Sbjct: 150 AGREMQNYRLDGCDIYITLEPCAMCASALIQARVKRVIYGAGEPKTGAAGSIVNLFADKR 209 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + I GI ++ R ++ FF+ +R Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237 >gi|241760058|ref|ZP_04758156.1| cytidine and deoxycytidylate deaminase family protein [Neisseria flavescens SK114] gi|241319512|gb|EER55942.1| cytidine and deoxycytidylate deaminase family protein [Neisseria flavescens SK114] Length = 240 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM A+E+A+ +A E+PVGAV V + I+ A N +V+ HAEI A+ Sbjct: 90 SDMEAFMRLAIEQARQSAALGEVPVGAVIVYQGEAIAAAHNTCIGDHNVSHHAEINALAT 149 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L + D+Y+TLEPC+MCA+A+ AR+ R+ YGA+ PK GG + + Sbjct: 150 AGKALQNYRLEDCDVYITLEPCSMCASALIQARVGRVIYGAAEPKTGGAGSVVDLFADKR 209 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + I GI + + ++QDFF +R Sbjct: 210 LNKHTAILGGILAEECQSVLQDFFAAKR 237 >gi|261377687|ref|ZP_05982260.1| tRNA-specific adenosine deaminase [Neisseria cinerea ATCC 14685] gi|269145955|gb|EEZ72373.1| tRNA-specific adenosine deaminase [Neisseria cinerea ATCC 14685] Length = 239 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 55/145 (37%), Positives = 79/145 (54%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL +A+ +AL EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 93 EYFMRQALVQAEMSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQASS 152 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L D+Y+TLEPC MCA+A+ ARI+R+ YGA PK G + + + Sbjct: 153 EMQNYRLDGCDIYITLEPCAMCASALIQARIKRVIYGAVEPKTGAAGSIVNLFADKRLNT 212 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 213 HTAIRGGILQEECRSVLSCFFQNKR 237 >gi|255546921|ref|XP_002514518.1| conserved hypothetical protein [Ricinus communis] gi|223546122|gb|EEF47624.1| conserved hypothetical protein [Ricinus communis] Length = 1624 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 63/165 (38%), Positives = 81/165 (49%), Gaps = 17/165 (10%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +FM AL EA+ AA E+PVGAV V + KII+R N EL+D TAHAE++ IR Sbjct: 1098 KIDEMFMREALLEAKKAADTWEVPVGAVLVQHGKIIARGYNLVEELRDSTAHAEMICIRE 1157 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-- 119 L L E LYVTLEPC MCA AI ARI + +GA N G + + + Sbjct: 1158 ASNQLRSWRLAETTLYVTLEPCPMCAGAILQARIDTVVWGAPNKLLGADGSWIRLFPNGG 1217 Query: 120 ---------------ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + +I GI ++Q FF+ RR Sbjct: 1218 GGSGSELVDKPPAPVHPFHPNMKIRRGILAPECADVMQQFFQLRR 1262 >gi|121634737|ref|YP_974982.1| putative cytosine deaminase [Neisseria meningitidis FAM18] gi|120866443|emb|CAM10189.1| putative cytosine deaminase (EC 3.5.4.1) [Neisseria meningitidis FAM18] gi|325132183|gb|EGC54879.1| tRNA-specific adenosine deaminase [Neisseria meningitidis M6190] gi|325136130|gb|EGC58739.1| tRNA-specific adenosine deaminase [Neisseria meningitidis M0579] gi|325198167|gb|ADY93623.1| tRNA-specific adenosine deaminase [Neisseria meningitidis G2136] gi|325202278|gb|ADY97732.1| tRNA-specific adenosine deaminase [Neisseria meningitidis M01-240149] Length = 239 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 57/144 (39%), Positives = 81/144 (56%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALE+A+ +AL EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 94 HFMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSE 153 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 154 MQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTH 213 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 214 TAIRGGILQEECRAVLSRFFQNKR 237 >gi|33152629|ref|NP_873982.1| hypothetical protein HD1591 [Haemophilus ducreyi 35000HP] gi|33148853|gb|AAP96371.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP] Length = 183 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 79/148 (53%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 + M AL A+ A EIPVGAV V + II N+ L D +AHAEILAIR Sbjct: 26 QDIQLMQYALTLAKRAETMGEIPVGAVLVDSKGNIIGEGWNQVIALSDPSAHAEILAIRQ 85 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L + LYVTLEPCTMCA AI +R+ RL +GAS+ K G I + + Sbjct: 86 ASHRLQNYRLLDCTLYVTLEPCTMCAGAILHSRLSRLVFGASDYKTGAIGSRFHLFEDYK 145 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ + I +FF+ RR Sbjct: 146 MNHLLTVQGGVLKEACSKQISEFFQRRR 173 >gi|261367117|ref|ZP_05980000.1| tRNA-specific adenosine deaminase [Subdoligranulum variabile DSM 15176] gi|282571240|gb|EFB76775.1| tRNA-specific adenosine deaminase [Subdoligranulum variabile DSM 15176] Length = 153 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 86/147 (58%), Gaps = 1/147 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 M ALEEA+ AA E+PVGAV + +I++RA N K+ T HAE+LAI Sbjct: 2 TDEQLMQVALEEARIAAALGEVPVGAVIAKDGEIVARAHNLRERGKNATYHAELLAIDAA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C+ L L + +L+VTLEPC MC+ AI +R+RR+ YGA +PK G T + L Sbjct: 62 CKALGGWRLWQCELFVTLEPCPMCSGAIINSRLRRVVYGARDPKAGCCGGLTDLFALP-F 120 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P I G+ ++ ++ ++QDFF R Sbjct: 121 NHHPVIEQGLLQEDAQALLQDFFVMLR 147 >gi|161506947|ref|YP_001576901.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Lactobacillus helveticus DPC 4571] gi|160347936|gb|ABX26610.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lactobacillus helveticus DPC 4571] Length = 168 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A+++A+ A + E+P+GAV V K+I NR +D T HAE++AI+ Sbjct: 6 DKKKYMELAIDQAKEAEKQGEVPIGAVVVDPEGKVIGTGYNRRELDEDSTQHAEMIAIKE 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + + + Sbjct: 66 ACHNLGMWRLIDCSLFVTLEPCPMCAGAIINSRIKNVYFGALDPKAGACGSVVDLFEVEK 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P G+ + Q+++DFF+ R Sbjct: 126 FNHHPHSIRGLYRDQCAQMLKDFFRAIR 153 >gi|332526241|ref|ZP_08402370.1| tRNA-adenosine deaminase [Rubrivivax benzoatilyticus JA2] gi|332110075|gb|EGJ10703.1| tRNA-adenosine deaminase [Rubrivivax benzoatilyticus JA2] Length = 188 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 82/148 (55%), Gaps = 4/148 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN----KIISRAGNRNRELKDVTAHAEIL 57 ++ M+ AL++AQNA L E+PVGAV + ++++ NR D TAHAEI+ Sbjct: 9 ERDLHAMAIALDQAQNAWLVGEVPVGAVIMRPGPEGPQVLATGYNRPITTHDPTAHAEIV 68 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 A+R +L LPE +LYVTLEPC MCA A+ AR +R+ YGA +PK G + + Sbjct: 69 ALRHAATLLGNYRLPECELYVTLEPCAMCAMALMHARFKRIVYGAPDPKTGAAGSVVDLF 128 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 +H +I G+ +++ FF Sbjct: 129 ADRRLNHHTQIVGGVMAAECGDLLRRFF 156 >gi|301154746|emb|CBW14209.1| tRNA-specific adenosine deaminase [Haemophilus parainfluenzae T3T1] Length = 172 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL A A EIPVGAV V + I+ N + D TAHAEI+A+R Sbjct: 6 DEKFMQHALMLADRAEALGEIPVGAVLVDDEGNILGEGWNLSIIEHDPTAHAEIVALRNA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L LYVTLEPCTMCA AI +RI+RL +GAS+ K G + + F+ Sbjct: 66 AQNIQNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAVGSRFHFFDDYKM 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 +H+ EI G+ ++ Q + DFF Sbjct: 126 NHTLEITSGVLVEKCGQKLSDFF 148 >gi|296436400|gb|ADH18574.1| cytosine deaminase [Chlamydia trachomatis G/9768] gi|296438259|gb|ADH20420.1| cytosine deaminase [Chlamydia trachomatis G/11074] gi|297140760|gb|ADH97518.1| cytosine deaminase [Chlamydia trachomatis G/9301] Length = 163 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM AL+EA+ A ++E+PVG + V +KII+R N +LKD TAHAE++ + Sbjct: 3 IEKDLFFMKKALDEARKAYEQDEVPVGCIIVHGDKIIARGHNSVEQLKDPTAHAEMICVS 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L + LY TLEPC MCA AI LARI R+ +GA + + G + + Sbjct: 63 AAAEYLENWRLKDTILYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEK 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E G+ Q S Q++++FF E+R Sbjct: 123 HPFHQVECCSGVCYQESEQLMKNFFLEKR 151 >gi|170723352|ref|YP_001751040.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida W619] gi|169761355|gb|ACA74671.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida W619] Length = 159 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL+ A A E+PVGAV V + ++I + NR D +AHAE++AIR Sbjct: 9 SRDQEFMRMALDLAAQGAALGEVPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRA 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + S LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ Sbjct: 69 AAKSASNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGF 128 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + I+ +FFK RR Sbjct: 129 LNHRVMFEGGVLAEECGAILSEFFKARR 156 >gi|82702354|ref|YP_411920.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Nitrosospira multiformis ATCC 25196] gi|82410419|gb|ABB74528.1| tRNA-adenosine deaminase [Nitrosospira multiformis ATCC 25196] Length = 163 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 75/148 (50%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM ALE + A E+PVGA+ V N I+ R N D TAHAE++A+R Sbjct: 3 SSDAGFMHVALELSAQAEQAGEVPVGAIVVRNGTIVGRGYNCPISTSDPTAHAEVMALRD 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L L + LYVTLEPC MC AI ARI RL YGA++PK G + Sbjct: 63 AGRHLGNYRLGDCTLYVTLEPCAMCMGAIFHARIARLVYGAADPKTGACGSVINLSAELR 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + ++ FF +RR Sbjct: 123 LNHHLQVTRGVLAEEGGYKLKQFFAKRR 150 >gi|121604898|ref|YP_982227.1| CMP/dCMP deaminase [Polaromonas naphthalenivorans CJ2] gi|120593867|gb|ABM37306.1| CMP/dCMP deaminase, zinc-binding protein [Polaromonas naphthalenivorans CJ2] Length = 411 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 61/147 (41%), Positives = 86/147 (58%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL +A+ AA E+PVGAV V K+I+ N E D TAHAEI+A+R Sbjct: 2 SDEAFMEMALVQARVAAAFGEVPVGAVVVRQGKVIATGRNAPVEAHDPTAHAEIMALRAA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L E +L+VTLEPC MC+ A+ AR++R+ +GAS PK G + + A Sbjct: 62 ALALGNYRLDECELFVTLEPCAMCSGAMLNARLKRVVFGASEPKTGAAGSVINLFAQARL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + SR ++QDFF++RR Sbjct: 122 NHQTELQGGVLAESSRALLQDFFRQRR 148 >gi|240949642|ref|ZP_04753977.1| tRNA-adenosine deaminase, cytosine/adenosine deaminases [Actinobacillus minor NM305] gi|240295900|gb|EER46576.1| tRNA-adenosine deaminase, cytosine/adenosine deaminases [Actinobacillus minor NM305] Length = 150 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 65/143 (45%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A EIPVGAV + N KI+ NR+ L D TAHAEI AIRM L Sbjct: 1 MQYALSLADKAEQEGEIPVGAVLIDKNGKILGEGWNRSIILSDSTAHAEIQAIRMAGEQL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPCTMCA AI +RI RL +GAS+ K G I + + +H Sbjct: 61 QNYRLLDTTLYVTLEPCTMCAGAILHSRIGRLVFGASDYKTGAIGSRFHLFEDYKMNHFL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ Q I FFK+RR Sbjct: 121 QIRGGVMRDECSQKISAFFKKRR 143 >gi|56478507|ref|YP_160096.1| cytosine/adenosine deaminase [Aromatoleum aromaticum EbN1] gi|56314550|emb|CAI09195.1| probable cytosine/adenosine deaminases [Aromatoleum aromaticum EbN1] Length = 154 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 52/147 (35%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM ALE+A+ A +E+PVGAV VL+ +I+ R N+ D +AHAE++A+R Sbjct: 2 SDEDFMRAALEQARMAGACDEVPVGAVVVLDGEIVGRGFNQPIRRHDPSAHAEVMALRDA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L P +L+VTLEPC MC+ AI AR+ R+ +GA +P+ G + + Sbjct: 62 GERLGNYRFPGCELFVTLEPCAMCSGAIMHARVARVVFGARDPRTGVAGSIIDLFAERRL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ +++ FF RR Sbjct: 122 NHHAEVAGGVLADECGRLLSGFFAARR 148 >gi|225163582|ref|ZP_03725891.1| CMP/dCMP deaminase zinc-binding [Opitutaceae bacterium TAV2] gi|224801817|gb|EEG20104.1| CMP/dCMP deaminase zinc-binding [Opitutaceae bacterium TAV2] Length = 202 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +MS A +A +A R+E+P+G V + ++I+ A N D TAHAE+LAI Sbjct: 32 RDDVFYMSLAYNQAIDAWRRDEVPIGCVIERSGEVIASAHNGVESANDPTAHAEMLAITQ 91 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L E LYVT EPC MC+ A ++R++R+ Y +PK G + T L Sbjct: 92 AASALGDWRLEECTLYVTKEPCPMCSGATLMSRLKRVCYAVPDPKMGCLGGATDLNALPR 151 Query: 122 CHHSPEIY-PGISEQRSRQIIQDFFKERR 149 +H I G+ E R ++Q FF+++R Sbjct: 152 VNHHLGITAGGVLEDECRVLLQTFFRQKR 180 >gi|313112820|ref|ZP_07798467.1| cytidine and deoxycytidylate deaminase zinc-binding region [Faecalibacterium cf. prausnitzii KLE1255] gi|310624890|gb|EFQ08198.1| cytidine and deoxycytidylate deaminase zinc-binding region [Faecalibacterium cf. prausnitzii KLE1255] Length = 160 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 87/147 (59%), Gaps = 1/147 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + M ALEEA+ AA E+PVGAV N ++++ A N K+ HAE+LAI Sbjct: 2 TDSELMGLALEEARKAAALGEVPVGAVVARNGEVVAAAHNTRETEKNALHHAELLAIDAA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C+ L L E +L+VTLEPC MCA AI +RIRR+ YGA++ K G + T + + Sbjct: 62 CKKLGGWRLWECELFVTLEPCPMCAGAIINSRIRRVVYGAADTKAGCCGSVTDLFAMP-F 120 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P + G+ + +++++Q FFK+ R Sbjct: 121 NHHPVVEQGLRAEEAQELLQAFFKDLR 147 >gi|254463267|ref|ZP_05076683.1| cytosine deaminase [Rhodobacterales bacterium HTCC2083] gi|206679856|gb|EDZ44343.1| cytosine deaminase [Rhodobacteraceae bacterium HTCC2083] Length = 157 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 74/147 (50%), Positives = 91/147 (61%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K FM AL EA+ A E+PVGAV V + II R N R D +AHAEILAIR Sbjct: 10 KFTSFMEAALVEARLAEAAGEVPVGAVVVKDGAIIGRGRNATRTGCDPSAHAEILAIREA 69 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C +L Q+ L + DLYVTLEPC MCA AI+ AR+ RLYYGAS+PK GG+ G + + A Sbjct: 70 CAVLGQDRLVDCDLYVTLEPCAMCAGAIAHARVARLYYGASDPKSGGVTVGARVFDHAQS 129 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 HH PE+Y GI S ++ FF +R Sbjct: 130 HHRPEVYDGIGADESGALLSAFFARKR 156 >gi|67922696|ref|ZP_00516200.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Crocosphaera watsonii WH 8501] gi|67855478|gb|EAM50733.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Crocosphaera watsonii WH 8501] Length = 165 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 81/149 (54%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M AL Q AA ++PVGAV + K+I++ N + D TAHAEI+AIR Sbjct: 10 ETHCYWMKQALNLGQEAAKAGDVPVGAVIIDSQGKLIAQGLNCKEQNHDPTAHAEIIAIR 69 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + LYVTLEPC MCA AI +R+ L YG +PK G I + A Sbjct: 70 QATQKLHSWYLNKCTLYVTLEPCIMCAGAIIHSRLGLLVYGVDDPKSGTIRSVLNLPDSA 129 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E RQ +QD+FK++R Sbjct: 130 ASNHRLSVLSGILEAECRQQLQDWFKQKR 158 >gi|320547592|ref|ZP_08041877.1| tRNA-specific adenosine deaminase [Streptococcus equinus ATCC 9812] gi|320447667|gb|EFW88425.1| tRNA-specific adenosine deaminase [Streptococcus equinus ATCC 9812] Length = 168 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL+EAQ + + EIP+G V V + +II R N E + HAEI+AI Sbjct: 7 EEKEFFMREALKEAQKSLEKEEIPIGCVIVKDGEIIGRGHNAREEQQKAILHAEIMAINE 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L+VT+EPC MC+ AI LARI ++ YGA+N K GG + T Sbjct: 67 ANENEGNWRLLDSMLFVTIEPCVMCSGAIGLARIPQVIYGAANQKFGGAGSLYDILTDIR 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E I+QDFF++ R Sbjct: 127 LNHRVEVETGILEAECAGIMQDFFRKNR 154 >gi|222153804|ref|YP_002562981.1| deaminase [Streptococcus uberis 0140J] gi|222114617|emb|CAR43628.1| putative deaminase [Streptococcus uberis 0140J] Length = 167 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 77/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL+EA+ + + EIP+G V V +II R N E HAEI+AI Sbjct: 6 EEKEFFMREALKEAKKSLDKGEIPIGCVIVKEGRIIGRGHNAREERNQAIMHAEIMAINE 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L + L+VT+EPC MC+ AI LARI ++ +GA N K GG + T Sbjct: 66 ANATVGNWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIFGAHNQKFGGAGSLYAILTDQR 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + I+Q FF+ R Sbjct: 126 LNHRVELETGLLAEECAAIMQTFFRAGR 153 >gi|116493223|ref|YP_804958.1| tRNA-adenosine deaminase [Pediococcus pentosaceus ATCC 25745] gi|116103373|gb|ABJ68516.1| tRNA-adenosine deaminase [Pediococcus pentosaceus ATCC 25745] Length = 161 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 52/145 (35%), Positives = 84/145 (57%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N +M+ A++EAQ A + +E+P+GAV V + KII R N +D T HAE+LAI C Sbjct: 10 NFYMNEAIKEAQFAKMIDEVPIGAVVVHDGKIIGRGHNLREHSQDSTTHAEVLAITEACA 69 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + L+VT+EPC MC+ I +++ ++++GA +PK G + + +H Sbjct: 70 YLKSWRLWDCQLFVTIEPCLMCSGTIINSQLPQVFFGARDPKAGAVRSLYTVLEDTRLNH 129 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ GI R+ +++ FFKE R Sbjct: 130 QVTVHEGIEADRASMLMKTFFKEIR 154 >gi|261252226|ref|ZP_05944799.1| tRNA-specific adenosine-34 deaminase [Vibrio orientalis CIP 102891] gi|260935617|gb|EEX91606.1| tRNA-specific adenosine-34 deaminase [Vibrio orientalis CIP 102891] Length = 178 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 51/143 (35%), Positives = 76/143 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+E A +A + E+PVGAV V + +II+ N + D TAHAE+ IR Sbjct: 9 QDERFMRRAMELAAHAETQGEVPVGAVLVKDGEIIAEGWNESIGQHDATAHAEMQTIRKA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L + LYVTLEPC MCA A+ +R++R+ +GA + K G + Sbjct: 69 GEVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFEHQAA 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 +H ++ G+ E R +Q FF Sbjct: 129 YHYADVEKGLLEDECRVQLQAFF 151 >gi|118602884|ref|YP_904099.1| CMP/dCMP deaminase, zinc-binding [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567823|gb|ABL02628.1| CMP/dCMP deaminase, zinc-binding protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 156 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 82/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ A+E+A+ A NE+PVGA+ + NN++IS A N+ D TAHAEI +R Sbjct: 7 TDAQWMTLAIEQAKQAQKVNEVPVGAILIQNNQLISSAYNQPISNNDPTAHAEIQLLRAA 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L+ L + LYVTLEPCTMC AI AR+ + +GA + K G + Sbjct: 67 GKQLNNYRLYDTTLYVTLEPCTMCLGAIVHARVSYIVFGAYDQKSGVCGSCINLQNSQCF 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +HS I GI + + ++Q FFK RR Sbjct: 127 NHSINIQGGILADQCKDLLQQFFKSRR 153 >gi|15834852|ref|NP_296611.1| cytidine/deoxycytidylate deaminase family protein [Chlamydia muridarum Nigg] gi|301336416|ref|ZP_07224618.1| cytidine/deoxycytidylate deaminase family protein [Chlamydia muridarum MopnTet14] gi|8163170|gb|AAF73539.1| cytidine/deoxycytidylate deaminase family protein [Chlamydia muridarum Nigg] Length = 157 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM AL+EA+ A +E+PVG + V + II+R N LKD TAHAE++ I Sbjct: 3 IEKDLFFMKKALDEARKAYELDEVPVGCIIVQGDAIIARGHNSVERLKDPTAHAEMICIS 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L + LY TLEPC MCA AI LARI R+ +GA + + G + + Sbjct: 63 AAAEYLQNWRLKDTTLYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEK 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E PGI Q S ++++FF E+R Sbjct: 123 HPFHQVECCPGICHQESEWLMKNFFWEKR 151 >gi|15676827|ref|NP_273972.1| cytidine and deoxycytidylate deaminase family protein [Neisseria meningitidis MC58] gi|7226171|gb|AAF41340.1| cytidine and deoxycytidylate deaminase family protein [Neisseria meningitidis MC58] gi|316985330|gb|EFV64279.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Neisseria meningitidis H44/76] gi|325140176|gb|EGC62703.1| tRNA-specific adenosine deaminase [Neisseria meningitidis CU385] gi|325200381|gb|ADY95836.1| tRNA-specific adenosine deaminase [Neisseria meningitidis H44/76] Length = 239 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL +A+ ++ EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 90 EEMEHFMCEALRQAEQSSADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 149 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + Sbjct: 150 AGREIQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 209 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + I GI ++ R ++ FF+ +R Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237 >gi|325204006|gb|ADY99459.1| tRNA-specific adenosine deaminase [Neisseria meningitidis M01-240355] Length = 239 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL +A+ ++ EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 90 EEMEHFMCEALRQAEQSSADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 149 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + Sbjct: 150 AGREIQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 209 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + I GI ++ R ++ FF+ +R Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237 >gi|313668625|ref|YP_004048909.1| cytosine deaminase [Neisseria lactamica ST-640] gi|313006087|emb|CBN87548.1| putative cytosine deaminase (EC 3.5.4.1) [Neisseria lactamica 020-06] Length = 239 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 55/144 (38%), Positives = 80/144 (55%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALE+A+ +AL EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 94 HFMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSK 153 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L D+Y+TLEPC MCA+A+ AR++R+ YGA PK G + + + Sbjct: 154 IQNYRLDGCDIYITLEPCAMCASALIQARVKRVIYGAGEPKTGAAGSIVNLFADKRLNTH 213 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 214 TAIRGGILQEECRAVLSRFFQNKR 237 >gi|283131456|dbj|BAI63455.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae subsp. equisimilis] Length = 183 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 13 LDEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNVREESNQAIMHAEMMAIN 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + ++VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 73 EANAHEGNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDE 132 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + I+Q FF++ R Sbjct: 133 RLNHRVQVERGLLAEDCANIMQTFFRQGR 161 >gi|326798488|ref|YP_004316307.1| CMP/dCMP deaminase zinc-binding protein [Sphingobacterium sp. 21] gi|326549252|gb|ADZ77637.1| CMP/dCMP deaminase zinc-binding protein [Sphingobacterium sp. 21] Length = 156 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL EAQ A +E+P+GAV V + KII+R N L DVTAHAE+ A Sbjct: 14 SDEFFMKEALREAQKAFDADEVPIGAVIVHDGKIIARGHNLTETLNDVTAHAEMQAFTAA 73 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L + LYVT+EPC MCA A ++I+R+ +GA + K G Sbjct: 74 ANYIGGKYLKDCTLYVTIEPCVMCAGASYWSQIKRIVFGARDEKRGYATISKDIV----- 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI E+ R+++Q FF+ +R Sbjct: 129 HPKTTVVSGIMEETCRELMQRFFQLKR 155 >gi|149369606|ref|ZP_01889458.1| putative cytosine/adenosine deaminase [unidentified eubacterium SCB49] gi|149357033|gb|EDM45588.1| putative cytosine/adenosine deaminase [unidentified eubacterium SCB49] Length = 152 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 82/147 (55%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A +EA+ A + EIP+GAV V +NKII+RA N L DVTAHAE+ AI Sbjct: 9 DDTYFMKRAFQEAETAYSQGEIPIGAVIVADNKIIARAHNLTETLNDVTAHAEMQAITAA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L LYVT+EPC MCA A+ ++I + YGA + + G +E GT+ Sbjct: 69 ANYLGGKYLKGCTLYVTIEPCQMCAGALYWSQISNVVYGARDEQRGCLEMGTKL------ 122 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ + +++ FF E+R Sbjct: 123 HPKTKMTGGVLAEECATLLKRFFIEKR 149 >gi|134297898|ref|YP_001111394.1| CMP/dCMP deaminase [Desulfotomaculum reducens MI-1] gi|134050598|gb|ABO48569.1| tRNA-adenosine deaminase [Desulfotomaculum reducens MI-1] Length = 151 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 64/147 (43%), Positives = 87/147 (59%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +FM AL EAQ AA++ E+P+GAV V +++I R + L D +AHAEILA+R Sbjct: 2 SHALFMREALIEAQKAAVKGEVPIGAVVVWKDEVIGRGYDLRESLCDASAHAEILAMRKA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + LYVT+EPC MCA AI RI RL YGA N K G ++ A Sbjct: 62 AKHLGDWRLNDATLYVTVEPCAMCAGAIVQFRINRLVYGAPNAKSGSVDTILNIVQEARF 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E + ++IIQ+FF+E R Sbjct: 122 NHRVEVIAGILEDQCKEIIQNFFRELR 148 >gi|323142068|ref|ZP_08076916.1| cytidine and deoxycytidylate deaminase zinc-binding region [Phascolarctobacterium sp. YIT 12067] gi|322413455|gb|EFY04326.1| cytidine and deoxycytidylate deaminase zinc-binding region [Phascolarctobacterium sp. YIT 12067] Length = 166 Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 81/149 (54%), Gaps = 2/149 (1%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M AL EA+ AA EIP+GAV ++I+ A N D TAHAE++ IR Sbjct: 2 EDKKYMQLALAEARKAAELGEIPIGAVLADMTTGEVIAAAHNMRETWHDATAHAEVIVIR 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C L + L LYVT+EPC MC+ AI R+ R+ YG + K GG E+ T Sbjct: 62 EACERLGRWRLSGCALYVTVEPCPMCSGAIVNGRVDRVVYGCHDVKAGGAESIFNIITNP 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E+ Q+++DFF+ RR Sbjct: 122 NLNHCAEVISGICEEECAQVMRDFFRRRR 150 >gi|224368847|ref|YP_002603009.1| putative riboflavin biosynthesis protein ribD [Desulfobacterium autotrophicum HRM2] gi|223691564|gb|ACN14847.1| putative riboflavin biosynthesis protein ribD [Desulfobacterium autotrophicum HRM2] Length = 150 Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 63/148 (42%), Positives = 87/148 (58%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 +M ALEEA+ AA +E+PVGAV V +I++R N+ L D TAHAE+LA+RM Sbjct: 2 NDLFYMKIALEEAEKAARMDEVPVGAVLVDGTGRILARTHNQPITLCDPTAHAEMLALRM 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G LP LY T+EPC MC AI AR+ R+ YGA +PK G + F A Sbjct: 62 GGEKTGNYRLPGATLYSTIEPCVMCMGAIIHARLSRIVYGACDPKWGAAGSLYNFAFDAR 121 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ EI PG+ + + +II+ FF+ +R Sbjct: 122 LNHTLEIVPGVCKDEATEIIRGFFRNKR 149 >gi|89901064|ref|YP_523535.1| CMP/dCMP deaminase [Rhodoferax ferrireducens T118] gi|89345801|gb|ABD70004.1| CMP/dCMP deaminase, zinc-binding [Rhodoferax ferrireducens T118] Length = 363 Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M M AL +A AAL E+PVGAV + + +I+ N + E +D +AHAEI+A+R Sbjct: 15 MTDDQA-MQLALTQAGLAALAGEVPVGAVVLKDGVLIASGRNASIETQDPSAHAEIVALR 73 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L +L+VTLEPC MC A+ AR++R+ YGA +PK G + + Sbjct: 74 AAALALGNYRLDGCELFVTLEPCAMCVGAMLHARLQRVVYGAPDPKTGAAGSVLDLFANP 133 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ +++Q FF+++R Sbjct: 134 QLNHHTEVQGGVLADACAELLQRFFQQKR 162 >gi|258625208|ref|ZP_05720121.1| zinc-binding domain protein [Vibrio mimicus VM603] gi|258582498|gb|EEW07334.1| zinc-binding domain protein [Vibrio mimicus VM603] Length = 157 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 54/142 (38%), Positives = 77/142 (54%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR ++LS Sbjct: 1 MRRAIMLAAQAEEQGEVPVGAVLVRDGEIIAEGWNCSITHHDATAHAEIEVIRKAGKVLS 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +R++R+ YGA + K G + +H Sbjct: 61 NYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFNSQASYHYAT 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R +Q FF+ RR Sbjct: 121 VEKGLLEEECRAQLQAFFQRRR 142 >gi|59801336|ref|YP_208048.1| putative cytosine deaminase [Neisseria gonorrhoeae FA 1090] gi|194098422|ref|YP_002001481.1| putative cytosine deaminase [Neisseria gonorrhoeae NCCP11945] gi|240080887|ref|ZP_04725430.1| putative cytosine deaminase [Neisseria gonorrhoeae FA19] gi|240117796|ref|ZP_04731858.1| putative cytosine deaminase [Neisseria gonorrhoeae PID1] gi|240125599|ref|ZP_04738485.1| putative cytosine deaminase [Neisseria gonorrhoeae SK-92-679] gi|268597004|ref|ZP_06131171.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae FA19] gi|268603495|ref|ZP_06137662.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae PID1] gi|268684187|ref|ZP_06151049.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae SK-92-679] gi|59718231|gb|AAW89636.1| putative cytosine deaminase [Neisseria gonorrhoeae FA 1090] gi|193933712|gb|ACF29536.1| putative cytosine deaminase [Neisseria gonorrhoeae NCCP11945] gi|268550792|gb|EEZ45811.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae FA19] gi|268587626|gb|EEZ52302.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae PID1] gi|268624471|gb|EEZ56871.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae SK-92-679] Length = 239 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 90 EEMGYFMREALRQAEQSAADGEIPVGAVIVSDGKIITSAHNTCIADCNVSRHAEINALAQ 149 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + Sbjct: 150 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 209 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + I GI ++ R ++ FF+ +R Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237 >gi|322412766|gb|EFY03674.1| putative cytidine/deoxycytidylate deaminase family protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 175 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + FM AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 5 LDEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + ++VT+EPC MC+ AI LARI + YGA+N K GG ++ Q T Sbjct: 65 EANAHEGNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGANNQKFGGTDSLYQILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + I+Q FF++ R Sbjct: 125 RLNHRVQVERGLLAEDCANIMQTFFRQGR 153 >gi|62185341|ref|YP_220126.1| putative cytidine/deoxycytidylate deaminase family protein [Chlamydophila abortus S26/3] gi|62148408|emb|CAH64175.1| putative cytidine/deoxycytidylate deaminase family protein [Chlamydophila abortus S26/3] Length = 157 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 86/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM+ AL+EA+ A +E+PVG V V +NKII+R N +L+D TAHAEIL I Sbjct: 3 IEKDIFFMNQALKEARQAYDEDEVPVGCVIVKDNKIIARGHNTTEKLQDPTAHAEILCIG 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + LY TLEPC MCA AI LARIRR+ + A + + G + + Sbjct: 63 AAAQYLENWRLVDTVLYCTLEPCLMCAGAIQLARIRRIVWAAPDLRLGAGGSWLNVFKEK 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E + GI + Q+++ FF E+R Sbjct: 123 HPFHQVECFFGICCADAEQLMKQFFIEKR 151 >gi|154508436|ref|ZP_02044078.1| hypothetical protein ACTODO_00935 [Actinomyces odontolyticus ATCC 17982] gi|153798070|gb|EDN80490.1| hypothetical protein ACTODO_00935 [Actinomyces odontolyticus ATCC 17982] Length = 435 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 54/143 (37%), Positives = 69/143 (48%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A ++PVGAV V N +II R N D HAEI+A+R R Sbjct: 1 MGKALFLANRARETGDVPVGAVVVDENGRIIGRGWNCREANHDPAGHAEIVALREAGRSR 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA AI +RI R+ +GA +PK G + A H Sbjct: 61 GTWRLTGCTLIVTLEPCTMCAGAILASRIDRVVFGAWDPKAGAAGSLRDVLRDARMPHPT 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ Q + ++ FF R Sbjct: 121 EVIGGVLAQEAAMQLRSFFLSCR 143 >gi|309380104|emb|CBX21515.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 239 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 57/145 (39%), Positives = 81/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM ALE+A+ +AL EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 93 EHFMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGS 152 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 153 EMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNT 212 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 213 HSAIRGGILQEECRAVLSRFFQNKR 237 >gi|325295641|ref|YP_004282155.1| CMP/dCMP deaminase zinc-binding protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066089|gb|ADY74096.1| CMP/dCMP deaminase zinc-binding protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 155 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ ++F+ AL+EA+ A E+P+GA+ V + KIISRA NR L+D TAHAE+LAI+ Sbjct: 1 MELDHLFLLEALKEAKKAFKLGEVPIGAIIVKDRKIISRAFNRKEFLQDPTAHAELLAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R L+ L LY T+EPC MC I +RI RL Y +PK GGIE+ + Sbjct: 61 EASRKLNSWRLNGCTLYSTVEPCIMCCGVIIQSRIDRLVYSVPDPKFGGIESLYTIFKDK 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ I + + +++++FFK R Sbjct: 121 KVNHRLEVKK-IYIKEAEELLKEFFKALR 148 >gi|297737907|emb|CBI27108.3| unnamed protein product [Vitis vinifera] Length = 1151 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 64/166 (38%), Positives = 80/166 (48%), Gaps = 18/166 (10%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +FM AL EA+ AA E+PVGAV V + KII+R NR EL+D TAHAE++ IR Sbjct: 948 KIDEMFMREALLEAKKAANAWEVPVGAVLVQHGKIIARGCNRVEELRDSTAHAEMICIRE 1007 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-- 119 +L L E LYVTLEPC MCA AI ARI L +GA N G + + + Sbjct: 1008 ASNLLRTWRLSETTLYVTLEPCPMCAGAILQARIDTLVWGAPNKLLGADGSWIRLFPNGG 1067 Query: 120 ----------------ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H I G+ +Q FF+ RR Sbjct: 1068 EGGSGSELTDKTQAPAHPFHPKMTIRRGVLASECSDAMQQFFQLRR 1113 >gi|225423812|ref|XP_002277950.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1358 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 64/166 (38%), Positives = 80/166 (48%), Gaps = 18/166 (10%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +FM AL EA+ AA E+PVGAV V + KII+R NR EL+D TAHAE++ IR Sbjct: 1155 KIDEMFMREALLEAKKAANAWEVPVGAVLVQHGKIIARGCNRVEELRDSTAHAEMICIRE 1214 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-- 119 +L L E LYVTLEPC MCA AI ARI L +GA N G + + + Sbjct: 1215 ASNLLRTWRLSETTLYVTLEPCPMCAGAILQARIDTLVWGAPNKLLGADGSWIRLFPNGG 1274 Query: 120 ----------------ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H I G+ +Q FF+ RR Sbjct: 1275 EGGSGSELTDKTQAPAHPFHPKMTIRRGVLASECSDAMQQFFQLRR 1320 >gi|261401120|ref|ZP_05987245.1| tRNA-specific adenosine deaminase [Neisseria lactamica ATCC 23970] gi|269208892|gb|EEZ75347.1| tRNA-specific adenosine deaminase [Neisseria lactamica ATCC 23970] Length = 239 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 57/144 (39%), Positives = 81/144 (56%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALE+A+ +AL EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 94 HFMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSE 153 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 154 MQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTH 213 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 214 TAIRGGILQEECRAVLSRFFQNKR 237 >gi|323465896|gb|ADX69583.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lactobacillus helveticus H10] gi|328462872|gb|EGF34721.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Lactobacillus helveticus MTCC 5463] Length = 168 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A+++A+ A + E+P+GAV V K+I NR +D T HAE++AI+ Sbjct: 6 DKKKYMELAIDQAKEAEKQGEVPIGAVVVDPEGKVIGTGYNRRELDEDSTQHAEMIAIKE 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C L L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + + + Sbjct: 66 ACHNLGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFEVEK 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P G+ + Q+++DFF+ R Sbjct: 126 FNHHPHSIRGLYRDQCAQMLKDFFRAIR 153 >gi|332522875|ref|ZP_08399127.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus porcinus str. Jelinkova 176] gi|332314139|gb|EGJ27124.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus porcinus str. Jelinkova 176] Length = 176 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL+EA+ + ++ EIP+G V V KII R N EL HAEI+AI Sbjct: 6 DEKEFFMREALKEAEKSLVKAEIPIGCVIVKEGKIIGRGHNAREELNQAIMHAEIMAINE 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L E L+VT+EPC MC+ AI LARI + +GA N K GG + Q T Sbjct: 66 ANVHEGNWRLLETSLFVTIEPCVMCSGAIGLARIPHVIFGAPNQKFGGAGSLYQILTDQR 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E QI+QDFF + R Sbjct: 126 LNHRVELESGLLEAECAQIMQDFFHQSR 153 >gi|219870714|ref|YP_002475089.1| tRNA-adenosine deaminase [Haemophilus parasuis SH0165] gi|219690918|gb|ACL32141.1| tRNA-adenosine deaminase, cytosine/adenosine deaminases [Haemophilus parasuis SH0165] Length = 157 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 62/143 (43%), Positives = 76/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A EIPVGAV V II NR L D TAHAEI AIRM + + Sbjct: 1 MQYALSLADKAEAEGEIPVGAVLVDKTGNIIGEGWNRAIILSDPTAHAEIQAIRMAGQQI 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPCTMCA AI +RI RL +GAS+ K G + + + +H Sbjct: 61 QNYRLLDTTLYVTLEPCTMCAGAILHSRIGRLVFGASDYKTGALGSRFHLFEDYKMNHFL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I G+ Q I FF++RR Sbjct: 121 QIRGGVMANECSQKISAFFRKRR 143 >gi|329117262|ref|ZP_08245979.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus parauberis NCFD 2020] gi|326907667|gb|EGE54581.1| cytidine and deoxycytidylate deaminase zinc-binding region [Streptococcus parauberis NCFD 2020] Length = 169 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL EA+ + + EIP+G V V + +II R N EL HAE++AI Sbjct: 5 LEEKENFMREALREAEKSLAKEEIPIGCVIVKDGQIIGRGHNAREELNQAIMHAEMMAIS 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L E ++VT+EPC MC+ AI LARI ++ YGA+N K GG ++ Q T Sbjct: 65 QANAHEGNWRLLETTMFVTIEPCVMCSGAIGLARIPKVIYGAANQKFGGAQSLYQILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E I+Q FF++ R Sbjct: 125 RLNHRVELETGVLEADCAAIMQSFFRQNR 153 >gi|153815558|ref|ZP_01968226.1| hypothetical protein RUMTOR_01794 [Ruminococcus torques ATCC 27756] gi|317502188|ref|ZP_07960362.1| tRNA-specific adenosine deaminase [Lachnospiraceae bacterium 8_1_57FAA] gi|331088753|ref|ZP_08337663.1| hypothetical protein HMPREF1025_01246 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847200|gb|EDK24118.1| hypothetical protein RUMTOR_01794 [Ruminococcus torques ATCC 27756] gi|316896397|gb|EFV18494.1| tRNA-specific adenosine deaminase [Lachnospiraceae bacterium 8_1_57FAA] gi|330407276|gb|EGG86779.1| hypothetical protein HMPREF1025_01246 [Lachnospiraceae bacterium 3_1_46FAA] Length = 162 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 78/149 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +K +M A+++AQ A NE P+G V V KII R NR KD AHAEI AI+ Sbjct: 7 LKLDEKYMRAAIKQAQKAYAINETPIGCVIVYEGKIIGRGYNRRNTDKDPLAHAEIKAIK 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L + +YVTLEPC MCA AI +R+ R+ G NPK G + + Sbjct: 67 KASKKMGDWRLEQCTMYVTLEPCQMCAGAIIQSRLTRVVVGCMNPKAGCAGSVLNLLDIK 126 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ ++ FF+E R Sbjct: 127 QFNHQAELTTGVLEEECSALMTGFFRELR 155 >gi|123441377|ref|YP_001005364.1| tRNA-specific adenosine deaminase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088338|emb|CAL11129.1| putative zinc-binding protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 161 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 57/142 (40%), Positives = 78/142 (54%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A A + E+PVGA+ VL+N++I NR D TAHAEI+A+R G +++ Sbjct: 1 MQRALALALRAQVEGEVPVGAILVLDNQVIGEGWNRPIRDNDPTAHAEIMALRQGGQVVQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + +H E Sbjct: 61 NYRLIDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLVDILRHPGMNHQIE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I G+ + FF+ RR Sbjct: 121 ITAGVMADACAHQLSAFFRLRR 142 >gi|315605309|ref|ZP_07880353.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) [Actinomyces sp. oral taxon 180 str. F0310] gi|315312989|gb|EFU61062.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) [Actinomyces sp. oral taxon 180 str. F0310] Length = 451 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 70/143 (48%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A ++PVGAV V +II R N D T HAE++A+R L Sbjct: 1 MGKALFLANRARETGDVPVGAVVVDAGGRIIGRGWNCREGHHDPTGHAEVVALREAGCAL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA AI +R+ R+ +GA +PK G + A H Sbjct: 61 GTWRLTGCTLVVTLEPCTMCAGAILASRVDRVVFGAWDPKAGAAGSLRDVLRDARMPHPT 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ Q + ++ FF RR Sbjct: 121 EVIGGVLAQEAAMQLRSFFIGRR 143 >gi|23097481|ref|NP_690947.1| hypothetical protein OB0026 [Oceanobacillus iheyensis HTE831] gi|22775704|dbj|BAC11982.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 166 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 84/148 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +FM+ A+ EA+ A + NE+P+GAV V + +I+ + N ++ HAE+LA++ Sbjct: 8 SQDELFMAAAIREARRAWILNEVPIGAVIVHDGEIVGKGFNLRESMQATLTHAELLAMQE 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L + LYVTLEPC MCA AI +R++R+ YGA +PK G Sbjct: 68 ANNEIGSWRLEDCTLYVTLEPCPMCAGAIVQSRMKRVVYGAPDPKAGCAGTIMNLLNEPR 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ EQ+ I+++FFKE R Sbjct: 128 FNHQVEVTSGVLEQQCSTILKEFFKELR 155 >gi|294674558|ref|YP_003575174.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Prevotella ruminicola 23] gi|294472670|gb|ADE82059.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Prevotella ruminicola 23] Length = 150 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 62/148 (41%), Positives = 83/148 (56%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 KK +M AL+EA A EIP+GAV V ++++SRA N L DVTAHAE+ AI Sbjct: 8 KKDERYMQMALDEAHLALEAGEIPIGAVVVCKDRVVSRAHNLTETLCDVTAHAEMQAITA 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L E LYVT+EPCTMCA AI A+I R+ YGA + K G Sbjct: 68 AANTLGGKYLTECTLYVTVEPCTMCAGAIGWAQIPRIVYGAPDDKRG-----YHLLAPHA 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ E R+++Q+FFK +R Sbjct: 123 FHPKAQVTQGVLEDECRELMQNFFKAKR 150 >gi|242095760|ref|XP_002438370.1| hypothetical protein SORBIDRAFT_10g014230 [Sorghum bicolor] gi|241916593|gb|EER89737.1| hypothetical protein SORBIDRAFT_10g014230 [Sorghum bicolor] Length = 1607 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 63/167 (37%), Positives = 81/167 (48%), Gaps = 19/167 (11%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +FM AL EAQ AA E+PVGAV V N +II+R N +L+D TAHAEI+ IR Sbjct: 1407 KVDELFMREALLEAQRAADIWEVPVGAVLVQNGEIIARGCNLVEDLRDSTAHAEIVCIRE 1466 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY---- 117 L L + LYVTLEPC MCA AI ARI + +GA N G + + + Sbjct: 1467 ASNKLKTWRLADTTLYVTLEPCAMCAGAILQARIDTVVWGAPNKLLGADGSWVRLFPGDG 1526 Query: 118 ---------------TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + H I G+ +I+Q FF+ RR Sbjct: 1527 QTNTLDSTNQSKAAGPVHPFHPKITIRRGVLSTECSEIMQQFFQLRR 1573 >gi|315653116|ref|ZP_07906041.1| tRNA-specific adenosine deaminase [Lactobacillus iners ATCC 55195] gi|315489481|gb|EFU79118.1| tRNA-specific adenosine deaminase [Lactobacillus iners ATCC 55195] Length = 158 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ M A EA A + EIP+GAV V +I R NR +D T HAEI+AI+ Sbjct: 5 EEKEKIMKLAFLEADKAEKQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQ 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L+ L + L+VTLEPC MCA AI AR++ +YYGA +PK G + + Sbjct: 65 EACKNLNSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFT 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P+I+ G+ +++ Q +++FFK R Sbjct: 125 KFNHHPQIFGGLYREQAAQQLKNFFKNIR 153 >gi|270291185|ref|ZP_06197408.1| cytidine deaminase [Pediococcus acidilactici 7_4] gi|270280581|gb|EFA26416.1| cytidine deaminase [Pediococcus acidilactici 7_4] Length = 163 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 52/145 (35%), Positives = 81/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL+EAQ A + +E+P+GAV V + KII R N +D T HAE+LAI C Sbjct: 12 QFYMGEALKEAQFAKMIDEVPIGAVVVHDGKIIGRGHNLREHSQDATTHAEVLAITEACA 71 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + L+VT+EPC MC+ I ++I +Y+GA +PK G + + +H Sbjct: 72 YLRSWRLWDCQLFVTIEPCLMCSGTIINSQIPEVYFGARDPKAGAVRSLYTVLEDQRLNH 131 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ G++ ++ +++ FFK R Sbjct: 132 QVEVREGVAADQAAGLMKSFFKAIR 156 >gi|323701686|ref|ZP_08113358.1| CMP/dCMP deaminase zinc-binding protein [Desulfotomaculum nigrificans DSM 574] gi|323533459|gb|EGB23326.1| CMP/dCMP deaminase zinc-binding protein [Desulfotomaculum nigrificans DSM 574] Length = 144 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 62/142 (43%), Positives = 80/142 (56%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ AA + E+P+GAV V I+ R + L D +AHAEILA+R + L Sbjct: 1 MREALVEAQKAAEKGEVPIGAVVVAEGAIVGRGHDLRESLCDASAHAEILAMREAAKQLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L LYVT+EPC MCA AI R+RRL YGA NPK G +++ +H E Sbjct: 61 DWRLNHATLYVTVEPCAMCAGAIVQFRVRRLVYGAPNPKAGSVDSILDIVHQPRFNHRVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + GI E R +IQ+FF+ R Sbjct: 121 VISGIMEDECRAVIQNFFRSLR 142 >gi|257876509|ref|ZP_05656162.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus EC20] gi|257810675|gb|EEV39495.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus EC20] Length = 168 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 56/144 (38%), Positives = 79/144 (54%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A++EA+ A E+P+GAV VL+ KII R N + AHAE+ AI CR Sbjct: 14 FFMEEAIKEARKAEGLAEVPIGAVVVLDGKIIGRGHNLRETQQQAAAHAEMFAIEEACRT 73 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L + L+VTLEPC MC+ A+ LAR+ +Y+GA +PKGG +H Sbjct: 74 VGSWRLEQAQLFVTLEPCPMCSGAMLLARVEEVYFGAYDPKGGTAGTLMNLLEDERFNHW 133 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI E+ Q++ DFF+ R Sbjct: 134 SYVEGGILEEACGQLLTDFFRALR 157 >gi|325144274|gb|EGC66579.1| tRNA-specific adenosine deaminase [Neisseria meningitidis M01-240013] Length = 239 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 90 EEMEHFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSCHAEINALAQ 149 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + Sbjct: 150 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 209 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + I GI ++ R ++ FF+ +R Sbjct: 210 LNTHTAIRGGILQEECRAVLNRFFQNKR 237 >gi|254448832|ref|ZP_05062288.1| zinc-binding domain protein [gamma proteobacterium HTCC5015] gi|198261522|gb|EDY85811.1| zinc-binding domain protein [gamma proteobacterium HTCC5015] Length = 163 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 83/147 (56%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M ALE+A+ AA E+PVGAV V +++I+ A NR D TAHAEI +R Sbjct: 8 RDECYMQLALEQAELAAQVGEVPVGAVLVQGDEVIASAFNRPIAEHDPTAHAEIQVLRQA 67 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L + LYVTLEPC MC AI ARI RL Y A+ PK G +++ Sbjct: 68 GQSQQNYRLCDTTLYVTLEPCVMCVGAILHARIGRLVYAAAEPKMGAVDSAFSLLRDERH 127 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ E SR++IQ FF++RR Sbjct: 128 FHRMQVASGVLEAPSRELIQSFFRQRR 154 >gi|209527530|ref|ZP_03276032.1| CMP/dCMP deaminase zinc-binding [Arthrospira maxima CS-328] gi|209492018|gb|EDZ92371.1| CMP/dCMP deaminase zinc-binding [Arthrospira maxima CS-328] Length = 157 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 77/149 (51%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M AL+ A E+PVGAV V K+I++ NR +D TAHAEI+A+R Sbjct: 6 TTHSHWMRQALKLGAAAGEAGEVPVGAVIVNQQGKLIAQGENRRERDRDPTAHAEIIALR 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L LYVTLEPC MCA AI ARI L YGA +PK G I Sbjct: 66 QASQVLGDWHLDTCTLYVTLEPCPMCAGAIIQARIGLLVYGADDPKTGSIRTVFNLPDSP 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E RQ +Q +F + R Sbjct: 126 ASYHRLPVLGGILESSCRQQLQSWFAQHR 154 >gi|293194557|ref|ZP_06610019.1| tRNA-specific adenosine deaminase [Actinomyces odontolyticus F0309] gi|292819677|gb|EFF78695.1| tRNA-specific adenosine deaminase [Actinomyces odontolyticus F0309] Length = 332 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 54/143 (37%), Positives = 69/143 (48%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A ++PVGAV V N +II R N D HAEI+A+R R Sbjct: 1 MGKALFLANRARETGDVPVGAVIVDENGRIIGRGWNCREANHDPAGHAEIVALREAGRAR 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA AI +RI R+ +GA +PK G + A H Sbjct: 61 GTWRLTGCTLIVTLEPCTMCAGAILASRIDRVVFGAWDPKAGAAGSLRDVLRDARMPHPT 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ Q + ++ FF R Sbjct: 121 EVIGGVLAQEAAMQLRSFFLSCR 143 >gi|302325469|gb|ADL24670.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 155 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 53/142 (37%), Positives = 74/142 (52%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL +AQ A EIP+G V V + +I + N+ +LKD TAHAEI+AI L Sbjct: 1 MRMALRQAQIAFDMKEIPIGCVIVKDGVVIGKGYNQVEQLKDATAHAEIIAIGTAASTLD 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L LYVTLEPC MCA AI +R+ R+ YG+ + + GG T + E Sbjct: 61 NWRLDGCTLYVTLEPCPMCAGAILNSRVSRIVYGSPDSRFGGCGTTIDVITGNALKRAVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + GI +++ FF++ R Sbjct: 121 VTGGILADECLGLLKGFFQQMR 142 >gi|261364637|ref|ZP_05977520.1| tRNA-specific adenosine deaminase [Neisseria mucosa ATCC 25996] gi|288567233|gb|EFC88793.1| tRNA-specific adenosine deaminase [Neisseria mucosa ATCC 25996] Length = 243 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 60/145 (41%), Positives = 82/145 (56%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL +A+ +A EIPVGAV V +N+II+ A N D++ HAEI A+ + Sbjct: 96 ETFMRAALVQAEQSARIGEIPVGAVVVADNQIIAAAHNTCVSDHDISRHAEIRALAVAGA 155 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L E DLY+TLEPC MCA+AI AR+RR+ YGA+ PK G + + + Sbjct: 156 ALQNYRLDECDLYITLEPCAMCASAIIQARVRRVIYGAAEPKTGAAGSVVNLFANPLLNK 215 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 I GI E + ++Q FF+ RR Sbjct: 216 HTAIKGGILEDECKDVLQAFFQTRR 240 >gi|51245291|ref|YP_065175.1| hypothetical protein DP1439 [Desulfotalea psychrophila LSv54] gi|50876328|emb|CAG36168.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54] Length = 166 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 82/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + ++M AL+EA A E+PVGAV V + ++I+ N D +AHAEI+A+R Sbjct: 9 RDALWMGYALDEAARAGANGEVPVGAVLVQDGELIATGLNGMITHNDPSAHAEIVALRQA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++L+ PE LYVTLEPC MC AI ARI+RL + A + K G + Sbjct: 69 GQVLNNYRFPEATLYVTLEPCIMCMGAIIQARIKRLVFAAFDTKTGAAGSLYDIGRDGAL 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + S +++ FF++RR Sbjct: 129 NHRVEIMGGVLAETSAALLKAFFRDRR 155 >gi|332140490|ref|YP_004426228.1| cytidine/deoxycytidylate deaminase family protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327550512|gb|AEA97230.1| cytidine/deoxycytidylate deaminase family protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 223 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 48/149 (32%), Positives = 76/149 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ +M AL A +A E+PVGA VLN ++I N D +AHAE+ A++ Sbjct: 56 LEQHIRWMKHALALADSAESIGEVPVGACVVLNGELIGEGYNTPISDHDPSAHAELRAVK 115 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + LYVTLEPC+MCA + AR++R+ +GA + K G + Sbjct: 116 QAASKVQNYRLIDATLYVTLEPCSMCAGMLVHARVKRVVFGAKDAKTGAAGSVMNLLQHP 175 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I G+ + DFF++RR Sbjct: 176 ALNHQVDIVSGVLASTCANKLSDFFRKRR 204 >gi|319638138|ref|ZP_07992901.1| cytidine and deoxycytidylate deaminase [Neisseria mucosa C102] gi|317400411|gb|EFV81069.1| cytidine and deoxycytidylate deaminase [Neisseria mucosa C102] Length = 240 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM A+E+A+ +A E+PVGAV V K I+ A N +V+ HAEI A+ Sbjct: 90 NDMEAFMRLAIEQARQSAALGEVPVGAVIVYQGKAIAAAHNTCIGDHNVSHHAEINALAA 149 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L + D+Y+TLEPC MCA+A+ AR+ R+ YGA+ PK G + + Sbjct: 150 AGKALQNYRLEDCDVYITLEPCAMCASALIQARVGRVIYGAAEPKTGAAGSVVDLFADKR 209 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + I GI + + ++QDFF +R Sbjct: 210 LNKHTAILGGILVEECQSVLQDFFAAKR 237 >gi|139473043|ref|YP_001127758.1| deaminase [Streptococcus pyogenes str. Manfredo] gi|134271289|emb|CAM29505.1| putative deaminase [Streptococcus pyogenes str. Manfredo] Length = 157 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL+EA+ + + EIP+G V V + +II R N E HAEI+AI Sbjct: 5 LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEIMAIN 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L+VT+EPC MC+ AI LARI + YGASN K GG ++ Q T Sbjct: 65 EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ I+Q FF++ R Sbjct: 125 RLNHRVQVERGLLAADCANIMQTFFRQGR 153 >gi|168210507|ref|ZP_02636132.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens B str. ATCC 3626] gi|170711409|gb|EDT23591.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens B str. ATCC 3626] Length = 143 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 +S ALEEA+ A + E+PVGAV V + +II+RA N LKD TAHAEILAIR C L+ Sbjct: 2 LSLALEEAEKAREKGEVPVGAVIVKDGEIIARAHNLKETLKDPTAHAEILAIREACNKLN 61 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L ++YVTLEPC MCA AI +R+ ++Y G + G + ++ E Sbjct: 62 NWRLNGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFLE 121 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + ++++ +I+ FFK+RR Sbjct: 122 VVWE-NDEKCSKILTKFFKDRR 142 >gi|167771010|ref|ZP_02443063.1| hypothetical protein ANACOL_02364 [Anaerotruncus colihominis DSM 17241] gi|167666680|gb|EDS10810.1| hypothetical protein ANACOL_02364 [Anaerotruncus colihominis DSM 17241] Length = 151 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 65/147 (44%), Positives = 84/147 (57%), Gaps = 1/147 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 N FM AL A AA R E+PVGAV V + +I+ NR K+ AHAE+ AI Sbjct: 2 NDNDFMGEALRLAGCAAERGEVPVGAVVVCDGQIVGTGFNRRETGKNALAHAELEAIDAA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 CR L L +LYVTLEPC MCA AI ARIRRL +GA +PK G + + F LA Sbjct: 62 CRRLGGWRLHRCELYVTLEPCPMCAGAIINARIRRLVFGARDPKSGCFGSVSDFNALA-F 120 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P++ G+ + QI+ FF++ R Sbjct: 121 NHKPQVVCGVRGEECAQILSAFFQKLR 147 >gi|259501366|ref|ZP_05744268.1| tRNA-specific adenosine deaminase [Lactobacillus iners DSM 13335] gi|302190913|ref|ZP_07267167.1| hypothetical protein LineA_02730 [Lactobacillus iners AB-1] gi|309808233|ref|ZP_07702142.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LactinV 01V1-a] gi|312872162|ref|ZP_07732235.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LEAF 2062A-h1] gi|312873556|ref|ZP_07733603.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LEAF 2052A-d] gi|312875738|ref|ZP_07735733.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LEAF 2053A-b] gi|325912947|ref|ZP_08175321.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners UPII 60-B] gi|259167219|gb|EEW51714.1| tRNA-specific adenosine deaminase [Lactobacillus iners DSM 13335] gi|308168521|gb|EFO70630.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LactinV 01V1-a] gi|311088730|gb|EFQ47179.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LEAF 2053A-b] gi|311090809|gb|EFQ49206.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LEAF 2052A-d] gi|311092246|gb|EFQ50617.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LEAF 2062A-h1] gi|325477761|gb|EGC80899.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners UPII 60-B] Length = 158 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ M A EA A + EIP+GAV V +I R NR +D T HAEI+AI+ Sbjct: 5 EEKEKIMKLAFLEADKAEQQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQ 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L+ L + L+VTLEPC MCA AI AR++ +YYGA +PK G + + Sbjct: 65 EACKNLNSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFT 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P+I+ G+ +++ Q +++FFK R Sbjct: 125 KFNHHPQIFGGLYREQAAQQLKNFFKNIR 153 >gi|297587228|ref|ZP_06945873.1| tRNA-specific adenosine deaminase [Finegoldia magna ATCC 53516] gi|297575209|gb|EFH93928.1| tRNA-specific adenosine deaminase [Finegoldia magna ATCC 53516] Length = 155 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 1/148 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM A+E+A+ A +E+PVG V V + +II++A N + K+ T HAE+ AI Sbjct: 3 NNDEKFMMKAIEQAKIAYDMDEVPVGCVIVKDGEIIAQAYNSVEKDKNATMHAELKAINQ 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L + +YVTLEPC MC A+ +RI ++ +GA + K G + Sbjct: 63 ATEFIGNFRLDDCIMYVTLEPCVMCTGALVYSRIPKVVFGAFDKKRGACGSLISLNDYEG 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ I E+ +++Q FF+ R Sbjct: 123 LNHKIEVKS-IMEKECVELMQSFFRRIR 149 >gi|254882842|ref|ZP_05255552.1| cytosine deaminase [Bacteroides sp. 4_3_47FAA] gi|319643397|ref|ZP_07998023.1| cytosine/adenosine deaminase [Bacteroides sp. 3_1_40A] gi|254835635|gb|EET15944.1| cytosine deaminase [Bacteroides sp. 4_3_47FAA] gi|317385026|gb|EFV65979.1| cytosine/adenosine deaminase [Bacteroides sp. 3_1_40A] Length = 144 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 81/149 (54%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL EA AA + E+PVGAV V ++II R N L DVTAHAE+ AI Sbjct: 1 MADDTYYMKQALMEAVKAAEQGEVPVGAVVVCRDRIIGRGHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L E LYVT+EPC MCA AI+ A+ +L +GA +PK G Q Y Sbjct: 61 AAANTLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDPKRG-----YQKYAPD 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI ++++DFFK++R Sbjct: 116 ALHPKTIVVKGILADECVRLMKDFFKKKR 144 >gi|229588606|ref|YP_002870725.1| putative deaminase [Pseudomonas fluorescens SBW25] gi|229360472|emb|CAY47329.1| putative deaminase [Pseudomonas fluorescens SBW25] Length = 166 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL A A E+PVGAV V + +II R N D +AHAE++AIR Sbjct: 14 SRDQDFMREALVLAAQGAALGEVPVGAVLVQDGEIIGRGFNCPISGNDPSAHAEMVAIRA 73 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + +S L LYVTLEPC+MCA I +RI R+ YGA PK G +++ QF+T Sbjct: 74 AAQAISNYRLVGSTLYVTLEPCSMCAGLIVHSRIARVVYGALEPKAGIVQSQGQFFTQGF 133 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ Q ++ +FF+ RR Sbjct: 134 LNHRVVFEGGVLAQECGTVLSEFFRARR 161 >gi|258510122|ref|YP_003183556.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257476848|gb|ACV57167.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 161 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM ALE A+ AA E+PVGAV V N +I+ NR +D TAHAE+LA Sbjct: 2 MEQAADERFMRRALELAEEAARWGEVPVGAVVVENGRIVGEGFNRRETWRDGTAHAEMLA 61 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I R L L LYVTLEPC MCA AI L+R++R+ YGA++ KGG + + + Sbjct: 62 IEEASRRLGGWRLTNCVLYVTLEPCPMCAGAIVLSRVQRVVYGATDAKGGAVASKVRLLE 121 Query: 119 LATCHHSPEIYPGISEQRSRQIIQD 143 +H+P+I GI +++ D Sbjct: 122 PGLWNHAPQITSGILADDCAKLLTD 146 >gi|18309013|ref|NP_560947.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens str. 13] gi|18143688|dbj|BAB79737.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 143 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 +S ALEEA+ A + E+PVGAV V + +II+RA N LKD TAHAEILAIR C L+ Sbjct: 2 LSLALEEAEKAREKGEVPVGAVIVKDGEIIARAHNLKETLKDPTAHAEILAIREACNKLN 61 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L ++YVTLEPC MCA AI +R+ ++Y G + G + ++ E Sbjct: 62 NWRLHGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFLE 121 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + ++++ +I+ FFK+RR Sbjct: 122 VVWQ-NDEKCSKILTKFFKDRR 142 >gi|309805439|ref|ZP_07699486.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LactinV 09V1-c] gi|309810071|ref|ZP_07703917.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners SPIN 2503V10-D] gi|308165257|gb|EFO67493.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LactinV 09V1-c] gi|308169570|gb|EFO71617.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners SPIN 2503V10-D] Length = 158 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 84/149 (56%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ M A EA A + EIP+GAV V +I R NR +D T HAEI+AI+ Sbjct: 5 EEKEKIMKLAFLEADKAEQQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQ 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L+ L + L+VTLEPC MCA AI AR++ +YYGA +PK G + + Sbjct: 65 EACKNLNSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFT 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P+I+ G+ +++ Q ++ FFK R Sbjct: 125 KFNHHPQIFGGLYREQAAQQLKKFFKNIR 153 >gi|253682749|ref|ZP_04863545.1| tRNA-specific adenosine deaminase [Clostridium botulinum D str. 1873] gi|253561071|gb|EES90524.1| tRNA-specific adenosine deaminase [Clostridium botulinum D str. 1873] Length = 147 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 84/149 (56%), Gaps = 3/149 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK FM AL+EA+ A +E+PVGA+ V K+I+ A N +LKD TAHAEILAI+ Sbjct: 1 MK--EEFMKLALKEAKIAKNMDEVPVGAIIVKEGKVIASAHNLREKLKDPTAHAEILAIK 58 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C IL L + ++YVTLEPC MC AI +RI+++Y G +P G + Sbjct: 59 KACEILGDWRLSDCEMYVTLEPCPMCTGAIIQSRIKKIYIGTFDPVAGCCGSVVDLVQNR 118 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + ++ + + +I+ +FFK RR Sbjct: 119 YLNTMIDVIW-LYHKECSEILTNFFKNRR 146 >gi|269129124|ref|YP_003302494.1| CMP/dCMP deaminase zinc-binding protein [Thermomonospora curvata DSM 43183] gi|268314082|gb|ACZ00457.1| CMP/dCMP deaminase zinc-binding protein [Thermomonospora curvata DSM 43183] Length = 168 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL++A+ A ++PVGAV + ++I+ N + D TAHAE++A+R L Sbjct: 24 MRLALDQARLAMESGDVPVGAVILDSGGRVIATGRNEREQTADPTAHAEVVALRSAAARL 83 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA A LAR+ R+ YGA +PK G + + +H P Sbjct: 84 GSWRLEGCTLVVTLEPCTMCAGAAVLARVDRIVYGAVDPKAGAVGSLWDVVRDRRLNHRP 143 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ + ++ +FF RR Sbjct: 144 EVIAEVLADECGAVLTEFFARRR 166 >gi|300024099|ref|YP_003756710.1| CMP/dCMP deaminase zinc-binding protein [Hyphomicrobium denitrificans ATCC 51888] gi|299525920|gb|ADJ24389.1| CMP/dCMP deaminase zinc-binding protein [Hyphomicrobium denitrificans ATCC 51888] Length = 145 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 84/143 (58%), Positives = 106/143 (74%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 MS AL+EA+ AA R E+PVGAV V + ++ AGNR REL D TAHAEILAIR C +L Sbjct: 1 MSLALDEARAAAERGEVPVGAVIVSASGDVLVLAGNRTRELNDPTAHAEILAIRAACSVL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L + DLYVTLEPC MCAAAIS ARIRRLYYGA +PK GG+E+G + ++ TCHH+P Sbjct: 61 ETERLVDCDLYVTLEPCPMCAAAISFARIRRLYYGAGDPKSGGVEHGPRIFSQQTCHHAP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+YPG++E S +++ FF +R Sbjct: 121 EVYPGLAEPESAALLKSFFAAKR 143 >gi|300770195|ref|ZP_07080074.1| tRNA-specific adenosine deaminase [Sphingobacterium spiritivorum ATCC 33861] gi|300762671|gb|EFK59488.1| tRNA-specific adenosine deaminase [Sphingobacterium spiritivorum ATCC 33861] Length = 154 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 6/149 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M AL A+ A +E+P+GAV V KII + N L DVTAHAE+ A Sbjct: 12 IDPDEFYMKAALTLAKKAYEEDEVPIGAVIVSQGKIIGKGYNLTERLNDVTAHAEMQAFT 71 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L + LYVT+EPC MCA A ++ R+ YGA + K G G Sbjct: 72 AASSYLGGKYLKDCTLYVTVEPCVMCAGASYWTQVSRIVYGAPDEKRGASRYG------K 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H EI G+ ++ ++I FF+++R Sbjct: 126 LFHPKTEIISGVLQEECAELITSFFRQKR 154 >gi|168217743|ref|ZP_02643368.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens NCTC 8239] gi|182380212|gb|EDT77691.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens NCTC 8239] Length = 143 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 59/142 (41%), Positives = 84/142 (59%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 +S ALEEA+ A + E+PVGAV V N +II+RA N LKD TAHAEILAIR C L+ Sbjct: 2 LSLALEEAEKAREKGEVPVGAVIVKNGEIIARAHNLKETLKDPTAHAEILAIREACNKLN 61 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L ++YVTLEPC MCA AI +R+ ++Y G + G + ++ E Sbjct: 62 NWRLNGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFLE 121 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + ++++ +I+ FFK+RR Sbjct: 122 VVWE-NDEKCSKILTKFFKDRR 142 >gi|153877830|ref|ZP_02004382.1| cytosine/adenosine deaminase [Beggiatoa sp. PS] gi|152065706|gb|EDN65618.1| cytosine/adenosine deaminase [Beggiatoa sp. PS] Length = 156 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 75/148 (50%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M AL A+ AA + EIPVGAV + I+ N++ D TAHAEI+A+R Sbjct: 6 LNNDKKWMRHALHLAERAAKQGEIPVGAVIIHGESCIAEGWNQSILAHDPTAHAEIVALR 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L + LYVTLEPC MCA AI AR++R+ +GA + K G + Sbjct: 66 KAAHYLKNYRLIDTTLYVTLEPCVMCAGAILQARVKRVVFGAYDEKAGAAGSRFDILRDT 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKER 148 +H E + + + DFF+++ Sbjct: 126 RHNHQVECVSQVLAEECGACLTDFFRQK 153 >gi|218929978|ref|YP_002347853.1| tRNA-specific adenosine deaminase [Yersinia pestis CO92] gi|115348589|emb|CAL21531.1| putative zinc-binding protein [Yersinia pestis CO92] Length = 159 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 59/142 (41%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A A E+PVGAV VL NK+I NR D TAHAEI+A+R G + + Sbjct: 1 MRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQGGQAVQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + +H E Sbjct: 61 NYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGMNHQIE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + GI + FF++RR Sbjct: 121 VSAGILAIACSHQLSAFFRQRR 142 >gi|325566945|ref|ZP_08143723.1| tRNA-specific adenosine deaminase [Enterococcus casseliflavus ATCC 12755] gi|325159117|gb|EGC71262.1| tRNA-specific adenosine deaminase [Enterococcus casseliflavus ATCC 12755] Length = 168 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 56/144 (38%), Positives = 79/144 (54%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A++EA+ A E+P+GAV VL+ KII R N + AHAE+ AI CR Sbjct: 14 FFMEEAIKEARKAEGVAEVPIGAVVVLDGKIIGRGHNLRETQQQAAAHAEMFAIEEACRT 73 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L + L+VTLEPC MC+ A+ LAR+ +Y+GA +PKGG +H Sbjct: 74 VGSWRLEQAQLFVTLEPCPMCSGAMLLARVEEVYFGAYDPKGGTAGTLMNLLEDERFNHW 133 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI E+ Q++ DFF+ R Sbjct: 134 SYVEGGILEEACGQLLTDFFRALR 157 >gi|153006601|ref|YP_001380926.1| CMP/dCMP deaminase [Anaeromyxobacter sp. Fw109-5] gi|152030174|gb|ABS27942.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter sp. Fw109-5] Length = 150 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 60/142 (42%), Positives = 82/142 (57%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ AA R E+PVGAVAV +++ R N D TAHAE+LAI+ R L Sbjct: 1 MQEALALARGAAERGEVPVGAVAVFEGRVVGRGANAREAAHDPTAHAELLAIQDAARALG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L V +YVTLEPC MCA A+ LARI RL Y AS+PK G + + T +H Sbjct: 61 RWRLTGVTVYVTLEPCAMCAGAMVLARIDRLVYAASDPKAGAVGSLVDLSTDPRLNHRFP 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ + + +++ FF+ RR Sbjct: 121 VDKGLLAEEAGDLLRAFFRARR 142 >gi|15964553|ref|NP_384906.1| putative deaminase protein [Sinorhizobium meliloti 1021] gi|307314743|ref|ZP_07594339.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium meliloti BL225C] gi|307320037|ref|ZP_07599458.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium meliloti AK83] gi|15073731|emb|CAC45372.1| Putative tRNA-specific adenosine deaminase [Sinorhizobium meliloti 1021] gi|306894252|gb|EFN25017.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium meliloti AK83] gi|306898967|gb|EFN29613.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium meliloti BL225C] Length = 149 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 86/149 (57%), Positives = 109/149 (73%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM AL+EA+ AA R E+P+GAV VL+ K+I+ AGNR REL D+TAHAEI AIR Sbjct: 1 MAETARFMQAALQEARKAAARGEVPIGAVVVLDGKMIAAAGNRTRELNDITAHAEIEAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + E L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FY Sbjct: 61 HAAAAVGDERLSGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYASP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCHH P++Y G++E+ + I+++FF RR Sbjct: 121 TCHHVPDVYSGLAEREAADILREFFAGRR 149 >gi|329897048|ref|ZP_08271820.1| tRNA-specific adenosine-34 deaminase [gamma proteobacterium IMCC3088] gi|328921488|gb|EGG28874.1| tRNA-specific adenosine-34 deaminase [gamma proteobacterium IMCC3088] Length = 159 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 80/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M AL +A+ A E+PVG V V + +I+ N D +AHAEI+A+R Sbjct: 1 MNEDEYWMRQALLQAEQAYACGEVPVGCVIVRDGSLIASGHNVVISSADPSAHAEIVALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + LYVTLEPC MC A+ AR++RL + A+ PK G + + + Sbjct: 61 HAGSRIGNYRLVDASLYVTLEPCLMCVGAMVHARVQRLIFAATEPKAGAVCSRCEALNFD 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ Q+S +++ FFKERR Sbjct: 121 HLNHRVQWQGGVMGQQSSELLSRFFKERR 149 >gi|282858963|ref|ZP_06268101.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella bivia JCVIHMP010] gi|282588243|gb|EFB93410.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella bivia JCVIHMP010] Length = 150 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 83/148 (56%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 KK +M AL+EA+ A EIP+GA+ V NKII+RA N L DVTAHAE+ AI + Sbjct: 8 KKDIYYMQRALDEAKQAYKEGEIPIGAIVVCKNKIIARAHNLTETLHDVTAHAEMQAITI 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L + LYVT+EPC MCA A+ ++I+R+ +G + K G Y Sbjct: 68 AANELGGKYLEDCTLYVTVEPCIMCAGALGWSQIKRVVFGCLDEKRG-----YHEYAPKA 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ + + ++Q FFKERR Sbjct: 123 LHPKANVIGGVLDSECKALMQRFFKERR 150 >gi|262278921|ref|ZP_06056706.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262259272|gb|EEY78005.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 167 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 80/148 (54%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A E+A+ AA + EIPVGAV V N++I N L D TAHAEI AIR Sbjct: 5 SDEYWMQLAYEQAELAAQQGEIPVGAVVVSQNRVIGSGYNAPISLLDPTAHAEIQAIRAA 64 Query: 63 CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C L LP + LYVTLEPCTMC A+ ARI+ + +G + PK G + + Q Sbjct: 65 CLSLENYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSTRQLLQHGY 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G +++ Q + FFK+RR Sbjct: 125 YNHRFTFEHGCLQEKCAQQLSHFFKQRR 152 >gi|307293957|ref|ZP_07573801.1| CMP/dCMP deaminase zinc-binding [Sphingobium chlorophenolicum L-1] gi|306880108|gb|EFN11325.1| CMP/dCMP deaminase zinc-binding [Sphingobium chlorophenolicum L-1] Length = 152 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 71/142 (50%), Positives = 93/142 (65%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+ A++AA E+P+GAV L+ +I+ NRNR D TAHAEI+AIR L Sbjct: 11 MRRALDLARSAAEAGEVPIGAVVTLDGRIVGEGENRNRRDNDPTAHAEIVAIRAAAAHLG 70 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L DL+VTLEPC MCA AIS ARI RLYY A++PKGG IE G +F+T C H PE Sbjct: 71 DFRLNGCDLWVTLEPCAMCAGAISHARIARLYYAAADPKGGAIEQGPRFFTQPQCLHRPE 130 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G+++ + +++DFF RR Sbjct: 131 VYGGLAQAEASMLLRDFFVARR 152 >gi|110597776|ref|ZP_01386060.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM 13031] gi|110340683|gb|EAT59163.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM 13031] Length = 153 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 58/150 (38%), Positives = 80/150 (53%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 M M A EA A + E+PVGAV V N +I R N+ L D TAHAE++A+ Sbjct: 1 MLDFTWCMELAFREAIKAFEKKEVPVGAVIVDSNGHVIGRGYNQVESLCDATAHAEMIAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + + L + L VT+EPC MCA AI A++ R+ +GA +PK G Sbjct: 61 TSAMATIGNKYLEDCTLAVTMEPCPMCAGAIVNAKVGRVVFGAYDPKMGASGTVMNITGC 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+Y GI E + R ++QDFF+E R Sbjct: 121 QQLNHQPEVYGGIMENKCRTLLQDFFRELR 150 >gi|313896633|ref|ZP_07830182.1| cytidine and deoxycytidylate deaminase zinc-binding region [Selenomonas sp. oral taxon 137 str. F0430] gi|320529093|ref|ZP_08030185.1| cytidine and deoxycytidylate deaminase zinc-binding region [Selenomonas artemidis F0399] gi|312974818|gb|EFR40284.1| cytidine and deoxycytidylate deaminase zinc-binding region [Selenomonas sp. oral taxon 137 str. F0430] gi|320138723|gb|EFW30613.1| cytidine and deoxycytidylate deaminase zinc-binding region [Selenomonas artemidis F0399] Length = 156 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 60/150 (40%), Positives = 81/150 (54%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59 M M AL EA+ A E+P+GAV + I+S N D TAHAE++AI Sbjct: 1 MPDDVKGMRLALAEAERAYALGEVPIGAVVMDGAGNIVSTGHNLRESEHDATAHAELIAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R CR L + L + LYVT+EPC MCA AI ++RI R+ YGA++ K G E+ Sbjct: 61 RRACRALGRWRLTGMTLYVTIEPCPMCAGAIVMSRISRVVYGAADSKAGACESLFNIPGC 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 T +H PE+Y + I++ FF ERR Sbjct: 121 MTLNHRPEVYGQVMADECHAIMRRFFNERR 150 >gi|182416390|ref|YP_001821456.1| CMP/dCMP deaminase zinc-binding [Opitutus terrae PB90-1] gi|177843604|gb|ACB77856.1| CMP/dCMP deaminase zinc-binding [Opitutus terrae PB90-1] Length = 178 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +MS A +A +A +E+P+GAV L ++++ A N E +D TAHAE+LAI Sbjct: 19 RDDTFYMSLAFNQAIDAWRLDEVPIGAVIELGGEVVAAAHNTVEEARDPTAHAEMLAITQ 78 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L +YVT EPC MC+ A+ ++R++R+ Y +PK G + T L Sbjct: 79 AAAKLGDWRLEGATVYVTKEPCPMCSGAMLMSRVKRVCYAVRDPKMGCLGGATNLNDLPR 138 Query: 122 CHHSPEIY-PGISEQRSRQIIQDFFKERR 149 +H E+ G+ E R ++Q FFK +R Sbjct: 139 VNHHVELTAGGVLEDECRALLQAFFKLKR 167 >gi|255534275|ref|YP_003094646.1| tRNA-specific adenosine-34 deaminase [Flavobacteriaceae bacterium 3519-10] gi|255340471|gb|ACU06584.1| tRNA-specific adenosine-34 deaminase [Flavobacteriaceae bacterium 3519-10] Length = 143 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL+EAQ A ++E+P+G + V NN+II++A N L DVTAHAE+ AI Sbjct: 1 MFTDEYYMKIALQEAQQALEKDEVPIGCIIVSNNRIIAKAHNLTEALNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L LYVTLEPC MC A+S ++I ++ GA + + G I Sbjct: 61 SAANYLGGKYLQNCTLYVTLEPCVMCCGALSWSQISKVVIGARDEQRGFINKNLSI---- 116 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H EI G+ E Q+++DFFK +R Sbjct: 117 --HPKTEIVLGVLENECSQLVKDFFKSKR 143 >gi|154247024|ref|YP_001417982.1| CMP/dCMP deaminase zinc-binding [Xanthobacter autotrophicus Py2] gi|154161109|gb|ABS68325.1| CMP/dCMP deaminase zinc-binding [Xanthobacter autotrophicus Py2] Length = 147 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 82/143 (57%), Positives = 108/143 (75%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL EA+ AA R E+PVGAV V ++I+R GNR REL D TAHAE+L +R L Sbjct: 5 YMQMALNEARAAAERGEVPVGAVLVRGAEVIARDGNRTRELNDPTAHAEVLVLRTAGARL 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPC MCAAA+S ARIRRLYYGAS+PKGGG+E+G +F++ TCHH P Sbjct: 65 KSERLVNCDLYVTLEPCAMCAAALSFARIRRLYYGASDPKGGGVEHGPRFFSQPTCHHMP 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GI+E+++ ++++ FF++RR Sbjct: 125 EVYGGIAERQAAEVLRSFFQDRR 147 >gi|303237080|ref|ZP_07323650.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella disiens FB035-09AN] gi|302482467|gb|EFL45492.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella disiens FB035-09AN] Length = 150 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 62/149 (41%), Positives = 84/149 (56%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +KK +M AL A+ A + E+PVGAV V N IISRA N L DVTAHAE+ AI Sbjct: 7 IKKDEYYMGRALAMAEEAFEKGEVPVGAVIVCRNHIISRAHNLTEALTDVTAHAEMQAIT 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M L + L + LYVT+EPC MCA A+ ++I+R+ YG S+ K G + Sbjct: 67 MSANELGGKYLQDCTLYVTVEPCIMCAGALGWSQIKRIVYGCSDDKRG-----FSLHAPK 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E+ + ++Q FFKERR Sbjct: 122 ALHPKTVVTKGVREEECKALMQRFFKERR 150 >gi|298368702|ref|ZP_06980020.1| tRNA-specific adenosine deaminase [Neisseria sp. oral taxon 014 str. F0314] gi|298282705|gb|EFI24192.1| tRNA-specific adenosine deaminase [Neisseria sp. oral taxon 014 str. F0314] Length = 241 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 55/145 (37%), Positives = 81/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +FM ALE+A +A EIPVGA V N +I+ A N + +DV+ HAEI A+ Sbjct: 93 EIFMRIALEQAVQSAAAGEIPVGAAVVKNGSVIAAAHNTCIQSRDVSRHAEISALAQAGA 152 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 +L L D+YVTLEPC MCA+A+ AR+ R+ +GA PK G + + + Sbjct: 153 VLGNYRLDGCDVYVTLEPCAMCASALIQARVARVIFGADEPKTGAAGSIIDLFAAHGINK 212 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + GI ++ R ++Q FF+E+R Sbjct: 213 HTAVTGGILKKECRTLLQQFFREKR 237 >gi|163867550|ref|YP_001608749.1| cytosine/adenosine deaminase [Bartonella tribocorum CIP 105476] gi|161017196|emb|CAK00754.1| Cytosine/adenosine deaminase [Bartonella tribocorum CIP 105476] Length = 148 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 83/142 (58%), Positives = 99/142 (69%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ AA ++E+PVGAV II+RAGN + D T HAEI IRM C L Sbjct: 6 MEIALLEAQWAAKKDEVPVGAVITRGKTIIARAGNFIKTAYDPTGHAEIRVIRMACETLQ 65 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E LP+ DLYVTLEPC MCAAAIS ARIRRLYY ++PKGG IENG +FY TCHH PE Sbjct: 66 SERLPDCDLYVTLEPCAMCAAAISFARIRRLYYATNDPKGGAIENGPRFYQQPTCHHKPE 125 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IY G E+ + Q+++DFF ++R Sbjct: 126 IYSGFKEKEAAQLLKDFFIQKR 147 >gi|257866910|ref|ZP_05646563.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus EC30] gi|257872573|ref|ZP_05652226.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus EC10] gi|257800868|gb|EEV29896.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus EC30] gi|257806737|gb|EEV35559.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus EC10] Length = 168 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 56/144 (38%), Positives = 79/144 (54%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A++EA+ A E+P+GAV VL+ KII R N + AHAE+ AI CR Sbjct: 14 FFMEEAIKEARKAEGLAEVPIGAVVVLDGKIIGRGHNLRETQQQAAAHAEMFAIEEACRT 73 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L + L+VTLEPC MC+ A+ LAR+ +Y+GA +PKGG +H Sbjct: 74 VGSWRLEQAQLFVTLEPCPMCSGAMLLARVEEVYFGAYDPKGGTAGTLMNLLEDERFNHW 133 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI E+ Q++ DFF+ R Sbjct: 134 SYVEGGILEEACGQLLTDFFRVLR 157 >gi|168214007|ref|ZP_02639632.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens CPE str. F4969] gi|170714472|gb|EDT26654.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens CPE str. F4969] Length = 143 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 +S ALEEA+ A + E+PVGAV V N +II+RA N LKD TAHAE+LAIR C L+ Sbjct: 2 LSLALEEAEKAREKGEVPVGAVIVKNGEIIARAHNLKETLKDPTAHAEMLAIREACNKLN 61 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L ++YVTLEPC MCA AI +R+ ++Y G + G + ++ E Sbjct: 62 NWRLHGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFLE 121 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + ++++ +I+ FFK+RR Sbjct: 122 VVWE-NDEKCSKILTKFFKDRR 142 >gi|297539076|ref|YP_003674845.1| CMP/dCMP deaminase zinc-binding protein [Methylotenera sp. 301] gi|297258423|gb|ADI30268.1| CMP/dCMP deaminase zinc-binding protein [Methylotenera sp. 301] Length = 162 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 59/146 (40%), Positives = 78/146 (53%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL AQ AA E+PVGA+ V + +I R GN + D TAHAEI A+R Sbjct: 14 DEHYMQIALALAQEAAAAGEVPVGAIIVKDGVVIGRGGNSPIDTHDPTAHAEIAALRDAA 73 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L L LYVTLEPC MC AI ARI RL YGA++PK G + + Sbjct: 74 KNLGNYRLVGCSLYVTLEPCAMCTGAIQHARIARLVYGANDPKTGACGSVVNLMAEPKLN 133 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E++ G + ++ +FFK+RR Sbjct: 134 HHTEVFSGELAKECGAMLSEFFKQRR 159 >gi|88813490|ref|ZP_01128725.1| zinc-binding domain protein [Nitrococcus mobilis Nb-231] gi|88789280|gb|EAR20412.1| zinc-binding domain protein [Nitrococcus mobilis Nb-231] Length = 181 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM+ ALE A+ A E+PVGAV V +++ NR +D TAHAEI A+R Sbjct: 24 DQDQAFMARALELARRAQAHGEVPVGAVVVQRERVVGEGYNRPIATRDPTAHAEIEALRA 83 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LP LYVTLEPC MC A+ AR+ RL +GA +PK G + + Sbjct: 84 AGQALGAYRLPATTLYVTLEPCAMCVGALIHARVARLVFGAHDPKTGACGGALRLIDYPS 143 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + +I++ FF++RR Sbjct: 144 HNHRIALCGGVLAETCSEILRAFFRDRR 171 >gi|325911630|ref|ZP_08174038.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners UPII 143-D] gi|325476616|gb|EGC79774.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners UPII 143-D] Length = 158 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ M A EA A + EIP+GAV V +I R NR +D T HAEI+AI+ Sbjct: 5 EEKERIMKLAFLEADKAEQQGEIPIGAVIVDAKGNLIGRGYNRRELDEDATRHAEIIAIQ 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L+ L + L+VTLEPC MCA AI AR++ +YYGA +PK G + + Sbjct: 65 EACKNLNSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFT 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P+I+ G+ +++ Q +++FFK R Sbjct: 125 KFNHHPQIFGGLYREQAAQQLKNFFKNIR 153 >gi|256823046|ref|YP_003147009.1| CMP/dCMP deaminase zinc-binding [Kangiella koreensis DSM 16069] gi|256796585|gb|ACV27241.1| CMP/dCMP deaminase zinc-binding [Kangiella koreensis DSM 16069] Length = 159 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 4/153 (2%) Query: 1 MKKGNVF----MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M F M A + A A + E+PVGAV + +I + N+ D TAHAE+ Sbjct: 1 MTDFTDFDQHCMQRAFDLASIAEEKGEVPVGAVLAKDGEIKTEGFNQPIFNHDPTAHAEM 60 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + +R + L L + LYVTLEPC MCA A+ AR+ R+ + ++P+ G + Sbjct: 61 VVLRAAGQKLDNYRLVDTTLYVTLEPCAMCAMAMVHARVSRVVFATTDPRTGAAGSVLNI 120 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +H + G+ ++ + ++ FF+ +R Sbjct: 121 LQNPSFNHQCVVESGLLQEDCSEQLKRFFRNKR 153 >gi|312870914|ref|ZP_07731019.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LEAF 3008A-a] gi|311093604|gb|EFQ51943.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LEAF 3008A-a] Length = 158 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ M A EA A + EIP+GAV V +I R NR +D T HAEI+AI+ Sbjct: 5 EEKERIMKLAFLEADKAEQQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQ 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L+ L + L+VTLEPC MCA AI AR++ +YYGA +PK G + + Sbjct: 65 EACKNLNSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFT 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P+I+ G+ +++ Q +++FFK R Sbjct: 125 KFNHHPQIFGGLYREQAAQQLKNFFKNIR 153 >gi|125597284|gb|EAZ37064.1| hypothetical protein OsJ_21407 [Oryza sativa Japonica Group] Length = 1528 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 63/167 (37%), Positives = 80/167 (47%), Gaps = 19/167 (11%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +FM AL EAQ AA E+PVGAV V N +II+R N +L+D TAHAEI+ IR Sbjct: 1326 KTDELFMREALHEAQRAADLWEVPVGAVLVQNGEIIARGCNLVEDLRDSTAHAEIVCIRE 1385 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY---- 117 L L + LYVTLEPC MCA AI AR+ + +GA N G + + + Sbjct: 1386 ASNKLKTWRLADTTLYVTLEPCAMCAGAILQARVDTVVWGAPNKLLGADGSWVRLFPGDG 1445 Query: 118 ---------------TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + H I GI +I+Q FF RR Sbjct: 1446 QTSSLDSANTNQGAGPVHPFHPKISIRRGILSAECSEIMQQFFHLRR 1492 >gi|125555393|gb|EAZ00999.1| hypothetical protein OsI_23033 [Oryza sativa Indica Group] Length = 1593 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 63/167 (37%), Positives = 80/167 (47%), Gaps = 19/167 (11%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +FM AL EAQ AA E+PVGAV V N +II+R N +L+D TAHAEI+ IR Sbjct: 1390 KTDELFMREALHEAQRAADLWEVPVGAVLVQNGEIIARGCNLVEDLRDSTAHAEIVCIRE 1449 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY---- 117 L L + LYVTLEPC MCA AI AR+ + +GA N G + + + Sbjct: 1450 ASNKLKTWRLADTTLYVTLEPCAMCAGAILQARVDTVVWGAPNKLLGADGSWVRLFPGDG 1509 Query: 118 ---------------TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + H I GI +I+Q FF RR Sbjct: 1510 QTSSLDSANTNQGAGPVHPFHPKISIRRGILSAECSEIMQQFFHLRR 1556 >gi|110798954|ref|YP_694504.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens ATCC 13124] gi|169343373|ref|ZP_02864377.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens C str. JGS1495] gi|182625368|ref|ZP_02953141.1| tRNA-specific adenosine deaminase [Clostridium perfringens D str. JGS1721] gi|110673601|gb|ABG82588.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens ATCC 13124] gi|169298459|gb|EDS80545.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens C str. JGS1495] gi|177909365|gb|EDT71817.1| tRNA-specific adenosine deaminase [Clostridium perfringens D str. JGS1721] Length = 143 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 +S ALEEA+ A + E+PVGAV V + +II+RA N LKD TAHAEILAIR C L+ Sbjct: 2 LSLALEEAEKAREKGEVPVGAVIVKDGEIIARAHNLKETLKDPTAHAEILAIREACNKLN 61 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L ++YVTLEPC MCA AI +R+ ++Y G + G + ++ E Sbjct: 62 NWRLHGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFLE 121 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + ++++ +I+ FFK+RR Sbjct: 122 VVWE-NDEKCSKILTKFFKDRR 142 >gi|115468148|ref|NP_001057673.1| Os06g0489500 [Oryza sativa Japonica Group] gi|51535686|dbj|BAD37705.1| putative cytosine deaminase [Oryza sativa Japonica Group] gi|113595713|dbj|BAF19587.1| Os06g0489500 [Oryza sativa Japonica Group] Length = 1590 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 63/167 (37%), Positives = 80/167 (47%), Gaps = 19/167 (11%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +FM AL EAQ AA E+PVGAV V N +II+R N +L+D TAHAEI+ IR Sbjct: 1388 KTDELFMREALHEAQRAADLWEVPVGAVLVQNGEIIARGCNLVEDLRDSTAHAEIVCIRE 1447 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY---- 117 L L + LYVTLEPC MCA AI AR+ + +GA N G + + + Sbjct: 1448 ASNKLKTWRLADTTLYVTLEPCAMCAGAILQARVDTVVWGAPNKLLGADGSWVRLFPGDG 1507 Query: 118 ---------------TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + H I GI +I+Q FF RR Sbjct: 1508 QTSSLDSANTNQGAGPVHPFHPKISIRRGILSAECSEIMQQFFHLRR 1554 >gi|241764554|ref|ZP_04762572.1| CMP/dCMP deaminase zinc-binding [Acidovorax delafieldii 2AN] gi|241365998|gb|EER60615.1| CMP/dCMP deaminase zinc-binding [Acidovorax delafieldii 2AN] Length = 454 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 45/128 (35%), Positives = 69/128 (53%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V + ++I+ N + D TAHAEI+A+R L L LYVTLE Sbjct: 15 GEVPVGAVVVKDGQVIATGRNAPVQSHDPTAHAEIVALRAAAEQLGNYRLDGCTLYVTLE 74 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC+ A+ AR+ R+ +GA +PK G + + +H ++ G+ ++ Sbjct: 75 PCAMCSGAMLHARVPRVVFGAVDPKTGAAGSVLDLFGYTVLNHHTQVQGGVLAHDCGALL 134 Query: 142 QDFFKERR 149 FF++RR Sbjct: 135 STFFRQRR 142 >gi|258649234|ref|ZP_05736703.1| tRNA-specific adenosine deaminase [Prevotella tannerae ATCC 51259] gi|260850414|gb|EEX70283.1| tRNA-specific adenosine deaminase [Prevotella tannerae ATCC 51259] Length = 143 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 82/147 (55%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL EA+ A E+PVGAV V ++II+RA N L DVTAHAE+ AI Sbjct: 2 TDQEYMQKALIEAKQAFEEGEVPVGAVIVCRDRIIARAHNLTERLTDVTAHAEMQAITAA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L + LYVT+EPC MCA A++ A++ R+ YGAS+PK G + Sbjct: 62 ANALGGKYLTDCTLYVTVEPCVMCAGALAWAQLSRIVYGASDPKRG-----FSVFAPNAL 116 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ + +++DFF+ RR Sbjct: 117 HPRTEVTEGVLAEECANLMKDFFQRRR 143 >gi|332707760|ref|ZP_08427787.1| tRNA-adenosine deaminase [Lyngbya majuscula 3L] gi|332353463|gb|EGJ32976.1| tRNA-adenosine deaminase [Lyngbya majuscula 3L] Length = 163 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 65/147 (44%), Positives = 80/147 (54%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ A+E AQ A E+PVGAV V N K+I+ NR KD TAHAEILA+R Sbjct: 14 HRKWMTVAIEIAQKAGEAGEVPVGAVIVDNEGKLIATGENRRERDKDPTAHAEILALRAA 73 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L LYVTLEPC MCA AI LAR+ L YG +PK G I A Sbjct: 74 GQQLQSWHLNHCTLYVTLEPCPMCAGAIILARLGLLVYGVDDPKTGSIRTVANLPDSACS 133 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E R+ +Q +F ERR Sbjct: 134 NHRLPVLGGIMESVCREQLQSWFAERR 160 >gi|157961143|ref|YP_001501177.1| zinc-binding CMP/dCMP deaminase [Shewanella pealeana ATCC 700345] gi|157846143|gb|ABV86642.1| CMP/dCMP deaminase zinc-binding [Shewanella pealeana ATCC 700345] Length = 163 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 48/138 (34%), Positives = 73/138 (52%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A++ A A + E+PVGAV V + +++S N + L D +AHAE+ +R +I+ Sbjct: 1 MKMAMDMAIKAEEKGEVPVGAVLVKDGEVVSAGFNFSIGLHDPSAHAEMQCLRQAGQIMQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA AI +RI RL +GA + K G + +H + Sbjct: 61 NYRLLDTTLYVTLEPCAMCAGAIVHSRINRLVFGARDEKTGAAGTVIDIVRHSAFNHQVD 120 Query: 128 IYPGISEQRSRQIIQDFF 145 + G+ E + + FF Sbjct: 121 VSSGVLETECSEQLSAFF 138 >gi|327438138|dbj|BAK14503.1| cytosine/adenosine deaminase [Solibacillus silvestris StLB046] Length = 167 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 85/148 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K + +M AL+EA+ AA E+P+GAV V ++II+RA N ++ HAE +AI+ Sbjct: 4 NKDHQYMQEALKEAKKAAALGEVPIGAVIVYKDEIIARAHNLRETTQNALTHAESMAIQE 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C+ + L E LYVTLEPC MCA AI +RI R+ YGA + K G +++ + A Sbjct: 64 ACKKVGSWRLEETTLYVTLEPCPMCAGAILQSRIPRVVYGARDIKAGCVDSLYRLLNDAR 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + QI+ DFFK R Sbjct: 124 FNHECTVTEGVMAEECGQILTDFFKALR 151 >gi|33597610|ref|NP_885253.1| putative zinc-binding hydrolase [Bordetella parapertussis 12822] gi|33602013|ref|NP_889573.1| putative zinc-binding hydrolase [Bordetella bronchiseptica RB50] gi|33574038|emb|CAE38361.1| putative zinc-binding hydrolase [Bordetella parapertussis] gi|33576451|emb|CAE33529.1| putative zinc-binding hydrolase [Bordetella bronchiseptica RB50] Length = 168 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 M+ ALE+AQ AA E+PVGAV V +++ NR +D TAHAEI+A+R Sbjct: 15 DDARLMALALEQAQEAARLGEVPVGAVVVDAQGEVLGAGYNRTIIDRDPTAHAEIVALRA 74 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L LP V LYVTLEPC MC A+ AR+ R+ YGA +PK G + + Sbjct: 75 AARRLDNYRLPGVSLYVTLEPCVMCIGAMLHARLARVVYGARDPKTGACGSVLDVGAVGQ 134 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ + ++++ FF+ RR Sbjct: 135 LNHHTTITGGVLAEPCGELLRGFFRARR 162 >gi|297838639|ref|XP_002887201.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis lyrata subsp. lyrata] gi|297333042|gb|EFH63460.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis lyrata subsp. lyrata] Length = 1135 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 62/162 (38%), Positives = 81/162 (50%), Gaps = 16/162 (9%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +FM AL EA+ AA E+PVGAV V + KII+R N EL+D TAHAE++ IR G Sbjct: 939 DEIFMREALVEAKKAADTWEVPVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREGS 998 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L L + LYVTLEPC MCA AI AR+ L +GA N G + + + + Sbjct: 999 KALRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGAPNKLLGADGSWIRLFPGGEGN 1058 Query: 124 ----------------HSPEIYPGISEQRSRQIIQDFFKERR 149 I G+ E Q +Q FF+ RR Sbjct: 1059 GSEVSEKPPPPVHPFHPKMTIRRGVLESECAQTMQQFFQLRR 1100 >gi|294012909|ref|YP_003546369.1| putative deaminase [Sphingobium japonicum UT26S] gi|292676239|dbj|BAI97757.1| putative deaminase [Sphingobium japonicum UT26S] Length = 156 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 70/142 (49%), Positives = 90/142 (63%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALE A+ A E+P+GAV L+ + I NRNR D TAHAE++AIR L Sbjct: 15 MRRALELARAAGEAGEVPIGAVVTLDGRTIGEGENRNRRDNDPTAHAEMVAIRAAAAHLG 74 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L DL+VTLEPC MCA AIS ARI RLYY A++PKGG IE G +F+T C H PE Sbjct: 75 DFRLAGCDLWVTLEPCAMCAGAISHARIARLYYAAADPKGGAIEQGPRFFTQPQCLHRPE 134 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G+++ + +++DFF RR Sbjct: 135 VYGGLAQAEASTLLRDFFLARR 156 >gi|110803707|ref|YP_697380.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens SM101] gi|110684208|gb|ABG87578.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens SM101] Length = 143 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 59/142 (41%), Positives = 84/142 (59%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 +S ALEEA+ A + E+PVGAV V N +II+RA N LKD TAHAEILAIR C L+ Sbjct: 2 LSLALEEAEKAREKGEVPVGAVIVKNGEIIARAHNLKETLKDPTAHAEILAIREACNKLN 61 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L ++YVTLEPC MCA AI +R+ ++Y G + G + ++ E Sbjct: 62 NWRLHGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFLE 121 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + ++ + +I+ +FFK+RR Sbjct: 122 VVWE-NDDKCSKILTNFFKDRR 142 >gi|15221490|ref|NP_177039.1| TADA (TRNA ARGININE ADENOSINE DEAMINASE); catalytic/ hydrolase/ zinc ion binding [Arabidopsis thaliana] gi|75336834|sp|Q9S7I0|TADA_ARATH RecName: Full=tRNA-specific adenosine deaminase, chloroplastic; Short=TADA; Flags: Precursor gi|5734706|gb|AAD49971.1|AC008075_4 Contains similarity to gi|3329316 cytosine deaminase from Chlamydia trachomatis genome gb|AE001357 and contains a PF|00383 cytidine deaminase zinc-binding region. EST gb|W43306 comes from this gene [Arabidopsis thaliana] gi|12324145|gb|AAG52046.1|AC011914_16 unknown protein; 92941-88668 [Arabidopsis thaliana] gi|332196710|gb|AEE34831.1| tRNA-specific adenosine deaminase [Arabidopsis thaliana] Length = 1307 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 62/162 (38%), Positives = 81/162 (50%), Gaps = 16/162 (9%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +FM AL EA+ AA E+PVGAV V + KII+R N EL+D TAHAE++ IR G Sbjct: 1110 DEIFMREALVEAKKAADTWEVPVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREGS 1169 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L L + LYVTLEPC MCA AI AR+ L +GA N G + + + + Sbjct: 1170 KALRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGAPNKLLGADGSWIRLFPGGEGN 1229 Query: 124 ----------------HSPEIYPGISEQRSRQIIQDFFKERR 149 I G+ E Q +Q FF+ RR Sbjct: 1230 GSEASEKPPPPVHPFHPKMTIRRGVLESECAQTMQQFFQLRR 1271 >gi|26450841|dbj|BAC42528.1| putative deaminase [Arabidopsis thaliana] gi|38564244|gb|AAR23701.1| At1g68720 [Arabidopsis thaliana] Length = 1307 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 62/162 (38%), Positives = 81/162 (50%), Gaps = 16/162 (9%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +FM AL EA+ AA E+PVGAV V + KII+R N EL+D TAHAE++ IR G Sbjct: 1110 DEIFMREALVEAKKAADTWEVPVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREGS 1169 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L L + LYVTLEPC MCA AI AR+ L +GA N G + + + + Sbjct: 1170 KALRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGAPNKLLGADGSWIRLFPGGEGN 1229 Query: 124 ----------------HSPEIYPGISEQRSRQIIQDFFKERR 149 I G+ E Q +Q FF+ RR Sbjct: 1230 GSEASEKPPPPVHPFHPKMTIRRGVLESECAQTMQQFFQLRR 1271 >gi|240849921|ref|YP_002971310.1| cytidine and deoxycytidylate deaminase [Bartonella grahamii as4aup] gi|240267044|gb|ACS50632.1| cytidine and deoxycytidylate deaminase [Bartonella grahamii as4aup] Length = 148 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 83/142 (58%), Positives = 100/142 (70%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ AA ++E+PVGAV II+RAGN + D T HAE+ AIRM C L Sbjct: 6 MEIALLEAQWAAKKDEVPVGAVITRGKAIIARAGNFIKSAYDPTGHAEMRAIRMACETLQ 65 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E LP+ DLYVTLEPC MCAAAIS ARIRRLYY ++PKGG IENG +FY TCHH PE Sbjct: 66 SERLPDCDLYVTLEPCAMCAAAISFARIRRLYYATNDPKGGAIENGPRFYQQPTCHHKPE 125 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IY G E+ + Q+++DFF ++R Sbjct: 126 IYSGFKEKEAAQLLKDFFVQKR 147 >gi|218674406|ref|ZP_03524075.1| CMP/dCMP deaminase zinc-binding protein [Rhizobium etli GR56] Length = 157 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 90/147 (61%), Positives = 112/147 (76%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K N FM ALEEA+ A R E+P+GAV V+++ +SR+GNR REL DVTAHAEI AIR+ Sbjct: 8 KTNRFMEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRELNDVTAHAEIAAIRLA 67 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C L QE L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FY TC Sbjct: 68 CEALGQERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYAQPTC 127 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 HH+PE+Y G +E +S +I++ FF ++R Sbjct: 128 HHAPEVYSGFNEVQSAEILRTFFSQKR 154 >gi|33592773|ref|NP_880417.1| putative zinc-binding hydrolase [Bordetella pertussis Tohama I] gi|33572421|emb|CAE41987.1| putative zinc-binding hydrolase [Bordetella pertussis Tohama I] gi|332382186|gb|AEE67033.1| putative zinc-binding hydrolase [Bordetella pertussis CS] Length = 149 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ ALE+AQ AA E+PVGAV V +++ NR +D TAHAEI+A+R R L Sbjct: 1 MALALEQAQEAARLGEVPVGAVVVDAQGEVLGTGYNRTIIDRDPTAHAEIVALRAAARRL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP V LYVTLEPC MC A+ AR+ R+ YGA +PK G + + +H Sbjct: 61 DNYRLPGVSLYVTLEPCVMCIGAMLHARLARVVYGARDPKTGACGSVLDVGAVGQLNHHT 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I G+ + ++++ FF+ RR Sbjct: 121 TITGGVLAEPCGELLRGFFRARR 143 >gi|295102136|emb|CBK99681.1| tRNA-adenosine deaminase [Faecalibacterium prausnitzii L2-6] Length = 162 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 85/149 (57%), Gaps = 2/149 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + M ALEEA+ AA E+PVGAV + +IIS A N K+ HAE+LAI Sbjct: 1 MTDFEL-MGAALEEARKAAALGEVPVGAVVAKDGEIISAAHNTRETEKNALHHAELLAID 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + +L+VTLEPC MC+ AI +RI+R+ YGA++ K G + T + Sbjct: 60 AACKKLGGWRLWQCELFVTLEPCPMCSGAIINSRIKRVVYGAADVKAGCCGSVTDLFAQP 119 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P I G+ ++Q++Q+FF R Sbjct: 120 -FNHHPVIEKGLRADEAQQLLQEFFVSLR 147 >gi|192359003|ref|YP_001981836.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain-containing protein [Cellvibrio japonicus Ueda107] gi|190685168|gb|ACE82846.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Cellvibrio japonicus Ueda107] Length = 201 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 72/148 (48%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + +M A+ A E+PVGAV V I N+ +D +AHAEI+A+R Sbjct: 8 QDDSYWMRRAIALASQGEALGEVPVGAVIVREGIAIGEGFNQPITSRDPSAHAEIVALRQ 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LP LYVTLEPCTMC A+ ARI RL YG + PK G + + + Sbjct: 68 AAAHLQNYRLPGATLYVTLEPCTMCVGALVHARITRLVYGTAEPKAGAVTSRARLLDADY 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + + FF++RR Sbjct: 128 VNHRVSYEGGLMAAECQHQLSHFFQQRR 155 >gi|302552546|ref|ZP_07304888.1| deaminase [Streptomyces viridochromogenes DSM 40736] gi|302470164|gb|EFL33257.1| deaminase [Streptomyces viridochromogenes DSM 40736] Length = 143 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 2/143 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL+EA A ++PVGAV + + +++ N D TAHAE+LA+R Sbjct: 1 MRLALDEAAGAVRGGDVPVGAVVLAPDGTTVLASGHNEREAGGDPTAHAELLALRRAAAE 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L L VTLEPCTMCA AI +R+ RL YGA + K G + + +H Sbjct: 61 LGTWRLAGCTLVVTLEPCTMCAGAIQQSRVDRLVYGARDEKAGAVGSLWDLVRDRRLNHR 120 Query: 126 PEIYPGISEQRSRQIIQDFFKER 148 PE+ G+ + Q++ +FF+ R Sbjct: 121 PEVIEGVLAEECAQLLTEFFRAR 143 >gi|86134359|ref|ZP_01052941.1| cytidine and deoxycytidylate deaminase [Polaribacter sp. MED152] gi|85821222|gb|EAQ42369.1| cytidine and deoxycytidylate deaminase [Polaribacter sp. MED152] Length = 149 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 64/147 (43%), Positives = 84/147 (57%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A +EA+ A + EIPVGAV VLNN+II+RA N L DVTAHAE+ A Sbjct: 6 DDTYFMKKAYQEAEIAFDKGEIPVGAVIVLNNQIIARAHNLTETLNDVTAHAEMQAFTAA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L + LYVTLEPC MCA A ++I+R+ YGAS PK G + GTQ Sbjct: 66 ANFLGGKYLKDCILYVTLEPCQMCAGASYWSQIQRIVYGASEPKRGFVNLGTQL------ 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ E +++ FF E+R Sbjct: 120 HPKTKVTSGVLENDCSLLLKRFFIEKR 146 >gi|160900241|ref|YP_001565823.1| CMP/dCMP deaminase [Delftia acidovorans SPH-1] gi|160365825|gb|ABX37438.1| CMP/dCMP deaminase zinc-binding [Delftia acidovorans SPH-1] Length = 475 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M ALE A+ AA E+PVGAV V + I+ + N D TAHAE+LA+R Sbjct: 32 DDEAWMRAALELARAAAQAGEVPVGAVIVKDGAIVGQGRNAPVAQGDPTAHAEVLALRDA 91 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L + LYVTLEPCTMC+ A+ AR+ R+ YGA+ P+ G + + L Sbjct: 92 AARLGNYRLDDCTLYVTLEPCTMCSGAMLHARLGRVVYGAAEPRTGAAGSVLDVFALPQI 151 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ ++ DFF+ RR Sbjct: 152 NHHTQVTRGVLAGECAALMSDFFRTRR 178 >gi|293379949|ref|ZP_06626050.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus crispatus 214-1] gi|290923462|gb|EFE00364.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus crispatus 214-1] Length = 156 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 50/143 (34%), Positives = 83/143 (58%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+++A+ A + E+P+GAV V + +++ NR +D T HAE++AI+ C L Sbjct: 1 MQLAIDQAKEAEKQGEVPIGAVVVDPDGRVVGTGYNRRELDEDATQHAEMIAIKEACSKL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L+VTLEPC MCA AI +RI+ +Y+GA +PK G + +++ +H P Sbjct: 61 GMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFSVEKFNHHP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ + Q+++DFF+ R Sbjct: 121 HAIRGLYRDQCAQMLKDFFRAIR 143 >gi|22297721|ref|NP_680968.1| putative cytidine or deoxycytidylate [Thermosynechococcus elongatus BP-1] gi|22293898|dbj|BAC07730.1| tlr0177 [Thermosynechococcus elongatus BP-1] Length = 164 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M A+ A+ A +E+PVGAV V N++I+ NR + D TAHAEI+A+R Sbjct: 13 HDFWMQQAIALAEQAGAADEVPVGAVIVSAENELIATGENRRQRDHDPTAHAEIIALRRA 72 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L LYVTLEPC MCA AI ARI L YG ++PK G I++ Q Sbjct: 73 GQRLGTWYLTGCRLYVTLEPCPMCAGAIVQARIHTLIYGTTDPKSGAIDSVLQLPQSPAV 132 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ RQ +Q +F++ R Sbjct: 133 FHRIQVIRGVQAVACRQQLQRWFRQHR 159 >gi|168206176|ref|ZP_02632181.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens E str. JGS1987] gi|170662306|gb|EDT14989.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens E str. JGS1987] Length = 143 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 59/142 (41%), Positives = 84/142 (59%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 +S ALEEA+ A + E+PVGAV V N +II+RA N LKD TAHAEILAIR C L+ Sbjct: 2 LSLALEEAEKAREKGEVPVGAVIVKNGEIIARAHNLKETLKDPTAHAEILAIREACNKLN 61 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L ++YVTLEPC MCA AI +R+ ++Y G + G + ++ E Sbjct: 62 NWRLHGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFLE 121 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + ++++ +I+ FFK+RR Sbjct: 122 VVWE-NDEKCSKILTKFFKDRR 142 >gi|88799915|ref|ZP_01115487.1| hypothetical protein MED297_15045 [Reinekea sp. MED297] gi|88777346|gb|EAR08549.1| hypothetical protein MED297_15045 [Reinekea sp. MED297] Length = 162 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 79/149 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M AL++A+ A E+P+GAV ++II N+ D +AHAE+LAIR Sbjct: 2 IRSDEDYMRAALQQAEQAYRAGEVPIGAVVTYQDRIIGEGYNQTITQLDPSAHAEMLAIR 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L LYVT+EPCTMC + +RI L +GA PK G I + + + A Sbjct: 62 AAAQAIGNYRLVGCTLYVTIEPCTMCVGLLVHSRIDCLVFGAPEPKAGAIRSASCVHEQA 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + + FF+ERR Sbjct: 122 HFNHEFEIRSGVLAEDCSGTMSRFFRERR 150 >gi|300172664|ref|YP_003771829.1| tRNA-specific adenosine deaminase [Leuconostoc gasicomitatum LMG 18811] gi|299887042|emb|CBL91010.1| tRNA-specific adenosine deaminase [Leuconostoc gasicomitatum LMG 18811] Length = 165 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 62/148 (41%), Positives = 85/148 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ + FM AL EA+ A E+P+GAV V +N II+RA N + TAHAE+LAI Sbjct: 10 EQIDYFMQVALNEAKFAENDGEVPIGAVIVKDNVIIARAHNHREAEQMATAHAELLAIES 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R+LS L + L+VTLEPC MCA AI ARI +YYGA + KGGG + Q Sbjct: 70 ANRLLSSWRLEDTALFVTLEPCIMCAGAIINARIPSVYYGAEDSKGGGTRSLYQLLEDDR 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +++ I ++Q FFK+ R Sbjct: 130 LNHRADVHTNIRGDEGGALLQHFFKKIR 157 >gi|309806673|ref|ZP_07700669.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LactinV 03V1-b] gi|308166978|gb|EFO69161.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LactinV 03V1-b] Length = 148 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 57/143 (39%), Positives = 83/143 (58%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A EA A + EIP+GAV V +I R NR +D T HAEI+AI+ C+ L Sbjct: 1 MKLAFLEADKAEQQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQEACKNL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L+VTLEPC MCA AI AR++ +YYGA +PK G + + +H P Sbjct: 61 NSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFTKFNHHP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I+ G+ +++ Q +++FFK R Sbjct: 121 QIFGGLYREQAAQQLKNFFKNIR 143 >gi|309803507|ref|ZP_07697600.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LactinV 11V1-d] gi|308164391|gb|EFO66645.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners LactinV 11V1-d] Length = 158 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 84/149 (56%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ M A EA A + EIP+GAV V +I R NR +D T HAEI+AI+ Sbjct: 5 EEKEKIMKLAFLEADKAEKQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQ 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L+ L + L+VTLEPC MCA AI AR++ +YYGA +PK G + + Sbjct: 65 EACKNLNSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFT 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P+I+ G+ +++ Q ++ FFK R Sbjct: 125 KFNHHPQIFGGLYREQAAQQLKIFFKNIR 153 >gi|163753582|ref|ZP_02160705.1| putative cytosine/adenosine deaminase [Kordia algicida OT-1] gi|161325796|gb|EDP97122.1| putative cytosine/adenosine deaminase [Kordia algicida OT-1] Length = 151 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 84/147 (57%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 N FM AL+EA+ A + E+PVGAV V++N++I+R N L DVTAHAE+ AI Sbjct: 8 DDNYFMKKALQEAEMAFEKGEVPVGAVIVIDNRVIARGHNLTETLNDVTAHAEMQAITAA 67 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L LYVTLEPC MCA A+ ++I + YGA + + G I+ T+ Sbjct: 68 ANFLGGKYLKRCTLYVTLEPCQMCAGALYWSQISNIVYGARDEERGCIKLNTKL------ 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ + + Q+++ FF ++R Sbjct: 122 HPKTVMKGGVLAEEASQLLKRFFIQKR 148 >gi|257454187|ref|ZP_05619457.1| tRNA-specific adenosine deaminase [Enhydrobacter aerosaccus SK60] gi|257448360|gb|EEV23333.1| tRNA-specific adenosine deaminase [Enhydrobacter aerosaccus SK60] Length = 187 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 62/149 (41%), Positives = 86/149 (57%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL+ A R E+PVGAV V II++ N+ D TAHAEI+AIR Sbjct: 25 DSDDAFMQAALDVAAEGGERGEVPVGAVIVHQGTIIAKGYNQPILSHDATAHAEIVAIRQ 84 Query: 62 GCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ LP + +L+VTLEPCTMC AI AR+ RL + A+ PK G I + F +A Sbjct: 85 ACQYFDNYRLPADCELFVTLEPCTMCLGAIIHARVSRLVFAATEPKAGMIVSQQDFSQVA 144 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++SR ++QDFF+ RR Sbjct: 145 FYNHFLTVKQGVMAEQSRALLQDFFRHRR 173 >gi|300774752|ref|ZP_07084615.1| cytosine deaminase [Chryseobacterium gleum ATCC 35910] gi|300506567|gb|EFK37702.1| cytosine deaminase [Chryseobacterium gleum ATCC 35910] Length = 143 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 82/149 (55%), Gaps = 6/149 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL+EA+ A ++E+P+G V V NN+II+RA N L DVTAHAE+ AI Sbjct: 1 MFTDEYYMKMALQEAEAALEKDEVPIGCVVVSNNRIIARAHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L + LYVT+EPC MC+ A+S ++I ++ GA + + G Sbjct: 61 SAANFLGGKYLKDCTLYVTMEPCVMCSGALSWSQISKVVIGARDEQRGF------INKHL 114 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + H E+ GI E I++ FFK +R Sbjct: 115 SLHPKTEVITGIMEAECSSIVKQFFKSKR 143 >gi|229828779|ref|ZP_04454848.1| hypothetical protein GCWU000342_00853 [Shuttleworthia satelles DSM 14600] gi|229793373|gb|EEP29487.1| hypothetical protein GCWU000342_00853 [Shuttleworthia satelles DSM 14600] Length = 154 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 57/142 (40%), Positives = 73/142 (51%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ +A+ A E+P+G V KII+R NR V HAEI AI+ CR L Sbjct: 1 MKEAIRQARKAEAIEEVPIGCVIEREGKIIARGYNRRNIDHSVLKHAEITAIQKACRKLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA AI ARI R+ GA NPK G + + +H E Sbjct: 61 DWRLEDCTLYVTLEPCQMCAGAIVQARIPRVVIGAMNPKAGSAGSVINLLQMREFNHQAE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I G+ E+ ++ FF E R Sbjct: 121 IEKGVMEEDCSALLSHFFAELR 142 >gi|281421269|ref|ZP_06252268.1| tRNA-specific adenosine deaminase [Prevotella copri DSM 18205] gi|281404804|gb|EFB35484.1| tRNA-specific adenosine deaminase [Prevotella copri DSM 18205] Length = 148 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 65/148 (43%), Positives = 85/148 (57%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 KK +M AL EAQ A +EIPVGA+ V ++IISRA N L DVTAHAE+ AI Sbjct: 6 KKDEAYMRRALMEAQAAFDEDEIPVGAIIVCKDRIISRAHNLTEMLTDVTAHAEMQAITS 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G +L + L + LYVT+EPC MCA A+ A+I R+ YGAS+ K G Y Sbjct: 66 GANMLGGKYLKDCTLYVTVEPCVMCAGALGWAQISRVVYGASDEKRG-----YTKYAPDA 120 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E R ++QDFF+ +R Sbjct: 121 LHPKTTVTSGVLEDECRALMQDFFQRKR 148 >gi|331701735|ref|YP_004398694.1| CMP/dCMP deaminase zinc-binding protein [Lactobacillus buchneri NRRL B-30929] gi|329129078|gb|AEB73631.1| CMP/dCMP deaminase zinc-binding protein [Lactobacillus buchneri NRRL B-30929] Length = 165 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 57/144 (39%), Positives = 80/144 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + FM AL EA A L E+P+GAV V + I+ R N L D TAHAEILAI+ Sbjct: 3 QADSRFMKAALIEANKAYLIGEVPIGAVVVHDGTIVGRGHNLREHLNDGTAHAEILAIQE 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 CR L L + DLYVT+EPC MCA AI +RI + +G+ +PK G + + Sbjct: 63 ACRTLRSWRLIDCDLYVTIEPCLMCAGAIINSRIENVCFGSRDPKAGATRSLYAVLEDSR 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 +H + G+ + +I++DFF Sbjct: 123 LNHQVNVVEGLYADAASRIMKDFF 146 >gi|150004434|ref|YP_001299178.1| putative cytosine/adenosine deaminase [Bacteroides vulgatus ATCC 8482] gi|212695454|ref|ZP_03303582.1| hypothetical protein BACDOR_05008 [Bacteroides dorei DSM 17855] gi|237708840|ref|ZP_04539321.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237724273|ref|ZP_04554754.1| cytosine deaminase [Bacteroides sp. D4] gi|265755901|ref|ZP_06090368.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|294775508|ref|ZP_06741020.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides vulgatus PC510] gi|149932858|gb|ABR39556.1| putative cytosine/adenosine deaminase [Bacteroides vulgatus ATCC 8482] gi|212661991|gb|EEB22565.1| hypothetical protein BACDOR_05008 [Bacteroides dorei DSM 17855] gi|229437461|gb|EEO47538.1| cytosine deaminase [Bacteroides dorei 5_1_36/D4] gi|229457266|gb|EEO62987.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263233979|gb|EEZ19580.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|294450653|gb|EFG19141.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides vulgatus PC510] Length = 144 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 81/149 (54%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL EA AA + E+PVGAV V ++II R N L DVTAHAE+ A+ Sbjct: 1 MADDTYYMKQALMEAVKAAEQGEVPVGAVVVCRDRIIGRGHNLTETLNDVTAHAEMQAVT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L E LYVT+EPC MCA AI+ A+ +L +GA +PK G Q Y Sbjct: 61 AAANTLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDPKRG-----YQKYAPD 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI ++++DFFK++R Sbjct: 116 ALHPKTIVVKGILADECARLMKDFFKKKR 144 >gi|292493710|ref|YP_003529149.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus halophilus Nc4] gi|291582305|gb|ADE16762.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus halophilus Nc4] Length = 142 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 58/142 (40%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A++A R E+PVGAV V ++++ N KD TAHAEI AIR + L Sbjct: 1 MHHALVLARHAEERGEVPVGAVLVQEGEMVAEGWNCPITAKDPTAHAEIQAIRAASQQLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L LYVTLEPC MCA AI ARI+R+ +GA +PKGG + +H + Sbjct: 61 NYRLVGTTLYVTLEPCAMCAGAIIQARIQRVVFGAFDPKGGAAGSVLSILPGDRLNHQVQ 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 GI + I+ FF+ RR Sbjct: 121 CQGGILAEPCGAILSAFFRARR 142 >gi|261392718|emb|CAX50291.1| tRNA-specific adenosine deaminase [Neisseria meningitidis 8013] Length = 239 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL +A+ ++ EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 90 EEMEHFMCEALRQAEQSSADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 149 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + Sbjct: 150 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 209 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + I GI ++ ++ FF+ +R Sbjct: 210 LNTHTAIRGGILQEECCAVLSRFFQNKR 237 >gi|153952715|ref|YP_001393480.1| hypothetical protein CKL_0054 [Clostridium kluyveri DSM 555] gi|219853386|ref|YP_002470508.1| hypothetical protein CKR_0043 [Clostridium kluyveri NBRC 12016] gi|146345596|gb|EDK32132.1| TadA [Clostridium kluyveri DSM 555] gi|219567110|dbj|BAH05094.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 145 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 61/145 (42%), Positives = 80/145 (55%), Gaps = 1/145 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A+++A+ A E+PVGAV V NN IISRA N LKD TAHAEILAIR + Sbjct: 2 DGFMFEAIKQAEMALQLGEVPVGAVVVKNNNIISRAYNLKETLKDSTAHAEILAIRSASK 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 ++ L + +YVTLEPC MCA AI RI RLY G +P G + +H Sbjct: 62 VVKNWRLKDCSMYVTLEPCPMCAGAILQCRISRLYIGTFDPVMGACGSVVNILQNNFLNH 121 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 +I + +++ FFK RR Sbjct: 122 WIDIQW-LYNNECSNMLKKFFKNRR 145 >gi|78101280|pdb|2A8N|A Chain A, Biochemical And Structural Studies Of A-To-I Editing By Trna:a34 Deaminases At The Wobble Position Of Transfer Rna gi|78101281|pdb|2A8N|B Chain B, Biochemical And Structural Studies Of A-To-I Editing By Trna:a34 Deaminases At The Wobble Position Of Transfer Rna Length = 144 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 86/144 (59%), Positives = 111/144 (77%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM AL EA++A R+E+P+GAV VL+ ++I+R+GNR REL DVTAHAEI IR Sbjct: 1 MAERTHFMELALVEARSAGERDEVPIGAVLVLDGRVIARSGNRTRELNDVTAHAEIAVIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M C L QE LP DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG +E+G +F++ Sbjct: 61 MACEALGQERLPGADLYVTLEPCTMCAAAISFARIRRLYYGAQDPKGGAVESGVRFFSQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144 TCHH+P++Y G++E S +I++ F Sbjct: 121 TCHHAPDVYSGLAESESAEILRQF 144 >gi|170017868|ref|YP_001728787.1| cytosine/adenosine deaminase [Leuconostoc citreum KM20] gi|169804725|gb|ACA83343.1| Cytosine/adenosine deaminase [Leuconostoc citreum KM20] Length = 169 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ + FM AL EA A E+P+GAV V NN+II++A N + TAHAE++AI Sbjct: 10 EQIDYFMQVALNEASIAFNEGEVPIGAVIVKNNQIIAKAHNHREAEQLATAHAELMAIEK 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L L+VTLEPC MCA AI +RI +YYGA + KGG + + A Sbjct: 70 ANLKLKSWRLENTALFVTLEPCVMCAGAIINSRIPAVYYGADDVKGGATRSLYRLLEDAR 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ GI + Q+++ FF + R Sbjct: 130 LNHRVAVHHGIRSEDCGQLLKQFFAQIR 157 >gi|119961460|ref|YP_946593.1| cytidine/deoxycytidylate deaminase [Arthrobacter aurescens TC1] gi|119948319|gb|ABM07230.1| putative cytidine/deoxycytidylate deaminase [Arthrobacter aurescens TC1] Length = 177 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 54/159 (33%), Positives = 78/159 (49%), Gaps = 12/159 (7%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL+EA+ A +++P+GAV + + ++ N D TAHAEI+AIR Sbjct: 10 DHLAWMGLALDEARLALKTDDVPIGAVVLGPDGGVLGSGRNEREAHGDPTAHAEIVAIRE 69 Query: 62 GCRILSQ-----------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 L Q L + L VTLEPC MCA AI LARI R+ +GA + K G + Sbjct: 70 AAAALRQLAHDSGASGDGWRLEDCTLVVTLEPCAMCAGAIVLARIPRVVFGAWDEKAGAV 129 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +H E+Y G+ E +++DFF R Sbjct: 130 GSVFDILRERRLNHWVEVYAGVREDECAALLRDFFATHR 168 >gi|262372477|ref|ZP_06065756.1| ComE operon protein 2 [Acinetobacter junii SH205] gi|262312502|gb|EEY93587.1| ComE operon protein 2 [Acinetobacter junii SH205] Length = 167 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 82/149 (55%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +M A E+A AA + EIPVGAV V +KII N +L D TAHAEI A+R Sbjct: 4 NKDEYWMQFAYEQAAIAASQGEIPVGAVIVSQDKIIGSGYNAPIQLSDPTAHAEIQALRS 63 Query: 62 GCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR + LP + LYVTLEPCTMC A+ ARI+++ + + PK G + + Q Sbjct: 64 ACRAIENYRLPDDAVLYVTLEPCTMCVGALIHARIQKVIFATTEPKAGSVVSARQLLDNG 123 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G +Q+ + DFFK+RR Sbjct: 124 YYNHKFVFEQGCLQQQCSAQLSDFFKQRR 152 >gi|312898548|ref|ZP_07757938.1| cytidine and deoxycytidylate deaminase zinc-binding region [Megasphaera micronuciformis F0359] gi|310620467|gb|EFQ04037.1| cytidine and deoxycytidylate deaminase zinc-binding region [Megasphaera micronuciformis F0359] Length = 158 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M A+EEA+ AA EIP+GAV + K I+RA N L TAHAEILAI Sbjct: 1 MTQDEFYMGKAIEEAKKAAAIGEIPIGAVIIYKKKAIARAHNLRETLPSATAHAEILAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR+LS+ L + LYVT EPC MCA A+ +R+ R+ YG +PKGGG + Sbjct: 61 EACRVLSRWRLTDCTLYVTAEPCPMCAGAVVNSRLDRIVYGCPDPKGGGTRSLYTIVEDE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ +++ FF++RR Sbjct: 121 RLNHRAQVTAGVRADECADLLKKFFQKRR 149 >gi|304385470|ref|ZP_07367815.1| tRNA-specific adenosine deaminase [Pediococcus acidilactici DSM 20284] gi|304328677|gb|EFL95898.1| tRNA-specific adenosine deaminase [Pediococcus acidilactici DSM 20284] Length = 161 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 51/145 (35%), Positives = 80/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL+EAQ A + +E+P+GAV V + KII R N +D T HAE+LAI C Sbjct: 10 QFYMGEALKEAQFAKMIDEVPIGAVVVHDGKIIGRGHNLREHSQDATTHAEVLAITEACA 69 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + L+VT+EPC MC+ I ++I +Y+GA + K G + + +H Sbjct: 70 YLRSWRLWDCQLFVTIEPCLMCSGTIINSQIPEVYFGARDSKAGAVRSLYTVLEDQRLNH 129 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ G++ ++ +++ FFK R Sbjct: 130 QVEVREGVAADQAAGLMKSFFKAIR 154 >gi|311742000|ref|ZP_07715810.1| cytidine and deoxycytidylate deaminase [Aeromicrobium marinum DSM 15272] gi|311314493|gb|EFQ84400.1| cytidine and deoxycytidylate deaminase [Aeromicrobium marinum DSM 15272] Length = 149 Score = 203 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 51/143 (35%), Positives = 72/143 (50%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALEEA+ A ++PVGAV + +I R N D HAE++A+R Sbjct: 7 MRLALEEARAALDTGDVPVGAVVLDPAGDVIGRGRNTRERDGDPLGHAEVVALREAAERT 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 Q L L VTLEPCTMCA A+ AR+ RL +GA + K G + + +H P Sbjct: 67 GQWRLEGCTLVVTLEPCTMCAGALVGARVDRLVFGAWDDKAGAVGSLWDVVRDRRLNHRP 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ S ++++FF R Sbjct: 127 EVVSGVLADESATLLREFFASHR 149 >gi|282897517|ref|ZP_06305518.1| Cytidine/deoxycytidylate deaminase, zinc-binding region protein [Raphidiopsis brookii D9] gi|281197612|gb|EFA72507.1| Cytidine/deoxycytidylate deaminase, zinc-binding region protein [Raphidiopsis brookii D9] Length = 185 Score = 203 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 +K +MS AL+ AQ A E+PVG + V +I + NR + +D TAHAEI+AI Sbjct: 14 IKYHQGWMSEALKLAQIAGDAGEVPVGCIIVNSQGDLIGQGENRKQRDQDPTAHAEIVAI 73 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R R L L + LYVTLEPC MCA AI AR++ L Y +PK G I + Sbjct: 74 RSAARTLQNWHLDQCTLYVTLEPCPMCAGAIIHARLQTLVYAVDDPKTGAIRTVINIPSS 133 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I GI E SRQ +Q +F +R Sbjct: 134 PASNHRLRIIGGILESASRQQLQSWFVYQR 163 >gi|328883836|emb|CCA57075.1| tRNA-specific adenosine-34 deaminase [Streptomyces venezuelae ATCC 10712] Length = 190 Score = 203 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA A ++PVGAV + + +++RA N D TAHAE+LA+R Sbjct: 49 MRIALAEADAALPAGDVPVGAVVLGPDGAVLARAHNEREATGDPTAHAEVLALRRAAVAT 108 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPC MCA A+ +R+ R+ +GA + K G + +H P Sbjct: 109 GEWRLTGCTLVVTLEPCVMCAGALVQSRVERVVFGAPDEKAGAAGSLWDLVRDRRLNHRP 168 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 E+ G+ + + FF+ R Sbjct: 169 EVIQGVLGAECAEQLTAFFRTR 190 >gi|218461412|ref|ZP_03501503.1| putative nitrogen fixation symbiosis related protein [Rhizobium etli Kim 5] Length = 157 Score = 203 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 89/147 (60%), Positives = 113/147 (76%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K N FM ALEEA+ A R E+P+GAV V+++ +SR+GNR REL DVTAHAEI AIR+ Sbjct: 8 KTNRFMEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRELNDVTAHAEIAAIRLA 67 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C L QE L DLYVTLEPCTMCAAAIS AR+RRLYYGA +PKGG ++NG +FY TC Sbjct: 68 CEALGQERLAGADLYVTLEPCTMCAAAISFARVRRLYYGAEDPKGGAVDNGVRFYAQPTC 127 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 HH+PE+Y G++E +S +I++ FF ++R Sbjct: 128 HHAPEVYSGLNEVQSAEILRKFFSQKR 154 >gi|91788312|ref|YP_549264.1| CMP/dCMP deaminase [Polaromonas sp. JS666] gi|91697537|gb|ABE44366.1| CMP/dCMP deaminase, zinc-binding protein [Polaromonas sp. JS666] Length = 461 Score = 203 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 84/147 (57%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL +A+ AA E+PVGAV V + ++I+ N + D TAHAEI+A+R Sbjct: 2 DDAFFMQLALAQAREAAAVGEVPVGAVVVRHGEVIATGRNAPVDANDPTAHAEIVALRAA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L E +L+VTLEPC MC+ A+ AR++R+ +GA++PK G + + + Sbjct: 62 AQALGNYRLDECELFVTLEPCAMCSGAMLHARLQRVVFGATDPKTGAAGSVINLFAESRL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + +++Q FF+ RR Sbjct: 122 NHQTGWQGGVLAEECGELLQAFFRRRR 148 >gi|29830723|ref|NP_825357.1| cytidine/deoxycytidine deaminase [Streptomyces avermitilis MA-4680] gi|29607836|dbj|BAC71892.1| putative cytidine/deoxycytidine deaminase [Streptomyces avermitilis MA-4680] Length = 142 Score = 203 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 53/142 (37%), Positives = 75/142 (52%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA AA ++PVGAV + + +I+R N D TAHAE+LA+R L Sbjct: 1 MRLALTEAVRAAESADVPVGAVVLAPDGSVIARGHNEREATGDPTAHAEVLAVRRAAERL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPCTMCA A+ +R+ R+ YGA + K G + +H P Sbjct: 61 GRWRLSGCTLVVTLEPCTMCAGALVQSRVDRVVYGARDEKAGAAGSLWDVVRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 E+ G+ ++ +FF+ER Sbjct: 121 EVIEGVLADECAGLLTEFFRER 142 >gi|15672703|ref|NP_266877.1| hypothetical protein L127182 [Lactococcus lactis subsp. lactis Il1403] gi|281491217|ref|YP_003353197.1| tRNA-specific adenosine deaminase [Lactococcus lactis subsp. lactis KF147] gi|12723633|gb|AAK04819.1|AE006305_11 conserved hypothetical protein [Lactococcus lactis subsp. lactis Il1403] gi|281374958|gb|ADA64476.1| tRNA-specific adenosine deaminase [Lactococcus lactis subsp. lactis KF147] gi|326406265|gb|ADZ63336.1| tRNA-specific adenosine deaminase [Lactococcus lactis subsp. lactis CV56] Length = 155 Score = 203 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 60/139 (43%), Positives = 82/139 (58%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 AL+EAQ AA E+P+G V V + +II+R NR T HAE+ AI + + Sbjct: 15 ALKEAQKAAENEEVPIGVVIVKDGEIIARDFNRRELDGRATHHAEVCAIEAANQAVGNWR 74 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130 L + L+VT+EPC MCA AI LARI ++Y+GA+NPK GG + Q +H ++ Sbjct: 75 LLDCALFVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQILEDKRLNHRVQVES 134 Query: 131 GISEQRSRQIIQDFFKERR 149 GI E +I+QDFFK RR Sbjct: 135 GILEDECAKIMQDFFKNRR 153 >gi|15606234|ref|NP_213612.1| hypothetical protein aq_903 [Aquifex aeolicus VF5] gi|6226405|sp|O67050|TADA_AQUAE RecName: Full=tRNA-specific adenosine deaminase gi|2983443|gb|AAC07025.1| hypothetical protein aq_903 [Aquifex aeolicus VF5] Length = 151 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 1/145 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 F+ AL EA+ A + E+PVGA+ V +IIS+A N ELKD TAHAE+LAI+ CR Sbjct: 4 EYFLKVALREAKRAFEKGEVPVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACR 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L+ + L +LYVTLEPC MC+ A+ L+RI ++ + A + K GG+ + T +H Sbjct: 64 RLNTKYLEGCELYVTLEPCIMCSYALVLSRIEKVIFSALDKKHGGVVSVFNILDEPTLNH 123 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + + + +++ +FFK+ R Sbjct: 124 RVKWEYYPL-EEASELLSEFFKKLR 147 >gi|254467918|ref|ZP_05081324.1| tRNA-specific adenosine deaminase [beta proteobacterium KB13] gi|207086728|gb|EDZ64011.1| tRNA-specific adenosine deaminase [beta proteobacterium KB13] Length = 160 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM AL+EA+ A +EIP+GA+ LNN+II R N + D T HAEI+A+R Sbjct: 12 MTDHTQFMQAALDEAEKARSLDEIPIGAIVTLNNEIIGRGFNSVIKNSDPTCHAEIMALR 71 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 LS LPEV+LYVTLEPC MC AI AR++++Y+GA + K + Q Sbjct: 72 DAAHHLSNYRLPEVNLYVTLEPCIMCLGAIFHARVKQVYFGAYDTKFHSCDPSQQLVNNK 131 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H GI E+ +++++FK +R Sbjct: 132 IINHHTSFEGGILEEECSTLLKNYFKNKR 160 >gi|86607357|ref|YP_476120.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Synechococcus sp. JA-3-3Ab] gi|86555899|gb|ABD00857.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Synechococcus sp. JA-3-3Ab] Length = 174 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 57/150 (38%), Positives = 85/150 (56%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59 ++ +M AL+EA+ A E+PV A+ V + +++ + NR +D TAHAEILA+ Sbjct: 19 WQRHRAWMQLALQEAERAGEAGEVPVAALVVGPGEELLALSSNRRERDRDPTAHAEILAL 78 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + L L LYVTLEPC MCA AIS +R+ ++ YGA +PK G + + Sbjct: 79 RQAGQRLGDWQLQGCRLYVTLEPCPMCAGAISQSRLAQVIYGADDPKAGALRSVLNLPAS 138 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A H PE+ G+ E R+++Q +F RR Sbjct: 139 AASFHCPEVIGGVCEAECRRLLQQWFSRRR 168 >gi|60593936|pdb|1WWR|A Chain A, Crystal Structure Of Trna Adenosine Deaminase Tada From Aquifex Aeolicus gi|60593937|pdb|1WWR|B Chain B, Crystal Structure Of Trna Adenosine Deaminase Tada From Aquifex Aeolicus gi|60593938|pdb|1WWR|C Chain C, Crystal Structure Of Trna Adenosine Deaminase Tada From Aquifex Aeolicus gi|60593939|pdb|1WWR|D Chain D, Crystal Structure Of Trna Adenosine Deaminase Tada From Aquifex Aeolicus Length = 171 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 1/145 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 F+ AL EA+ A + E+PVGA+ V +IIS+A N ELKD TAHAE+LAI+ CR Sbjct: 24 EYFLKVALREAKRAFEKGEVPVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACR 83 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L+ + L +LYVTLEPC MC+ A+ L+RI ++ + A + K GG+ + T +H Sbjct: 84 RLNTKYLEGCELYVTLEPCIMCSYALVLSRIEKVIFSALDKKHGGVVSVFNILDEPTLNH 143 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + + + +++ +FFK+ R Sbjct: 144 RVKWEYYPL-EEASELLSEFFKKLR 167 >gi|50085441|ref|YP_046951.1| putative deaminase [Acinetobacter sp. ADP1] gi|49531417|emb|CAG69129.1| putative deaminase [Acinetobacter sp. ADP1] Length = 174 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 61/148 (41%), Positives = 81/148 (54%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A E+A AA NE+PVGAV V NK+I N L D TAHAEI AIRM Sbjct: 8 NDEYWMQLAYEQAVRAAEHNEVPVGAVIVSQNKVIGSGYNAPITLNDPTAHAEIRAIRMA 67 Query: 63 CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C + LP + LYVTLEPCTMC A+ ARI R+ + + PK G + + Q + Sbjct: 68 CESVKNYRLPEDATLYVTLEPCTMCVGALVHARIHRVVFATTEPKAGSLVSARQLLNMGY 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G + + + + DFF++RR Sbjct: 128 YNHKFLIEHGCMQAQCSKQLSDFFRKRR 155 >gi|330998189|ref|ZP_08322015.1| cytidine and deoxycytidylate deaminase zinc-binding region [Paraprevotella xylaniphila YIT 11841] gi|329568881|gb|EGG50679.1| cytidine and deoxycytidylate deaminase zinc-binding region [Paraprevotella xylaniphila YIT 11841] Length = 144 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 83/149 (55%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M ALEEA+ A +EIPVGAV V ++I++RA N L D TAHAE+ I Sbjct: 1 MADDAFYMKKALEEARRAYDEDEIPVGAVVVCGDRILARAHNLTETLTDATAHAEMQVIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L E LYVTLEPC MCA AI A+++RL YGA++ K G + + Sbjct: 61 AAANALGGKYLNECTLYVTLEPCVMCAGAIGWAQVKRLVYGATDEKRG-----YKMFAPQ 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ + +++DFFK +R Sbjct: 116 AIHPRTEVVSGVMADEAVALLKDFFKGKR 144 >gi|254786582|ref|YP_003074011.1| cytidine and deoxycytidylate deaminase family protein [Teredinibacter turnerae T7901] gi|237687430|gb|ACR14694.1| cytidine and deoxycytidylate deaminase family protein [Teredinibacter turnerae T7901] Length = 164 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ AL A+ AA + E+PVGAV V + II R N D + HAEI A+R Sbjct: 4 NDEHWMTEALVLAREAAAQGEVPVGAVLVQDGAIIGRGSNNPIGSCDASGHAEICALRDA 63 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + LP LYVT+EPCTMC AI ARI R+ +GA PK G +E+ + + Sbjct: 64 GQRQKNYRLPNATLYVTIEPCTMCLGAIVHARIARVVFGAPEPKAGVLESNPELLSAKYF 123 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ Q ++IQ FFK RR Sbjct: 124 NHEFAWSGGVCAQECSELIQQFFKFRR 150 >gi|329921024|ref|ZP_08277552.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners SPIN 1401G] gi|328935300|gb|EGG31780.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus iners SPIN 1401G] Length = 158 Score = 203 bits (518), Expect = 7e-51, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 84/149 (56%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ M A EA A + EIP+GAV V +I R NR +D T HAEI+AI+ Sbjct: 5 EEKERIMKLAFLEADKAEQQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQ 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L+ L + L+VTLEPC MCA AI AR++ +YYGA +PK G + + Sbjct: 65 EACKNLNSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFT 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P+I+ G+ +++ Q ++ FFK R Sbjct: 125 KFNHHPQIFGGLYREQAAQQLKIFFKNIR 153 >gi|307328842|ref|ZP_07608012.1| CMP/dCMP deaminase zinc-binding [Streptomyces violaceusniger Tu 4113] gi|306885507|gb|EFN16523.1| CMP/dCMP deaminase zinc-binding [Streptomyces violaceusniger Tu 4113] Length = 166 Score = 203 bits (518), Expect = 7e-51, Method: Composition-based stats. Identities = 53/141 (37%), Positives = 73/141 (51%), Gaps = 1/141 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALEEA A ++PVGAV + + ++ R N D TAHAE+LA+R L Sbjct: 25 MRLALEEAVRAPETGDVPVGAVVLGPDGSVLGRGRNEREAHGDPTAHAEVLALRAAAHHL 84 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA AI L+R+ RL YGA + K G + + +H P Sbjct: 85 GGWRLTGCTLVVTLEPCTMCAGAIVLSRLNRLVYGAVDEKAGAVGSLWDVVRDRRLNHRP 144 Query: 127 EIYPGISEQRSRQIIQDFFKE 147 E+ G+ + + FF++ Sbjct: 145 EVIAGVLAEACAAPLTAFFRK 165 >gi|319408052|emb|CBI81706.1| Cytosine/adenosine deaminase [Bartonella schoenbuchensis R1] Length = 161 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 80/142 (56%), Positives = 101/142 (71%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ AA ++EIPVGAV + II+R GN + + D T HAEI AIR+ C IL Sbjct: 6 MEIALLEAQLAAKQDEIPVGAVIMRGKTIIARVGNYTKTVCDPTGHAEIRAIRIACEILQ 65 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E +P+ DLYVTLEPC MCAAAIS ARIRRLYY S+PKGG IE+G +FY TCHH PE Sbjct: 66 SERIPDCDLYVTLEPCAMCAAAISFARIRRLYYATSDPKGGAIEHGPRFYQQPTCHHIPE 125 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G E+ + ++++FF ++R Sbjct: 126 VYSGFKEKEASHLLKEFFAQKR 147 >gi|113969580|ref|YP_733373.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. MR-4] gi|113884264|gb|ABI38316.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. MR-4] Length = 252 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 50/146 (34%), Positives = 69/146 (47%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A+ A+ A E+PVGAV V + I+ N + D AHAEI +R Sbjct: 89 DEHWMRVAMAMAEKAEAAGEVPVGAVLVKEGQQIATGYNLSISEHDPCAHAEIQCLRAAG 148 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + + L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 149 QTIENYRLLDTTLYVTLEPCAMCAGAMVHSRIARVVFGAKDEKTGAAGTVLNLLQHPAFN 208 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H EI G+ Q + FFK RR Sbjct: 209 HQVEITSGVLAQDCADQLSRFFKRRR 234 >gi|229525486|ref|ZP_04414891.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae bv. albensis VL426] gi|229339067|gb|EEO04084.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae bv. albensis VL426] Length = 193 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR Sbjct: 27 QDEQFMRRAIALAAQAEAQGEVPVGAVLVRDGEIIAEGWNSSITNHDATAHAEIEVIRKA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++LS L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ Sbjct: 87 GKVLSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAA 146 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R +Q FF+ RR Sbjct: 147 YHYATVEKGLLEEECRAQLQAFFQRRR 173 >gi|227547038|ref|ZP_03977087.1| cytidine and deoxycytidylate deaminase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212455|gb|EEI80344.1| cytidine and deoxycytidylate deaminase [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 177 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 55/150 (36%), Positives = 75/150 (50%), Gaps = 2/150 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59 M+ M ALE A AA ++PVGAV + +I+ R N D AHAEI+A+ Sbjct: 29 MEYDEA-MRRALELAGQAAAAGDVPVGAVVLDAAGQIVGRGYNTREADGDPLAHAEIIAM 87 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + L L + L VTLEPC MCA A I + +GA +PK G + Sbjct: 88 RQAAQALGAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRD 147 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 HSPE++ G+ E + I+ DFF +RR Sbjct: 148 PHIGHSPEVHGGVLEGECQSILTDFFAQRR 177 >gi|325128107|gb|EGC51002.1| tRNA-specific adenosine deaminase [Neisseria meningitidis N1568] Length = 163 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 14 EEMEHFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 73 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + Sbjct: 74 AGREIQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 133 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + I GI ++ R ++ FF+ +R Sbjct: 134 LNTHTAIRGGILQEECRAVLSRFFQNKR 161 >gi|297158628|gb|ADI08340.1| cytidine/deoxycytidine deaminase [Streptomyces bingchenggensis BCW-1] Length = 144 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 74/143 (51%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALEEA A ++PVGAV + + + N D TAHAE+LA+R L Sbjct: 1 MRLALEEAARAPETGDVPVGAVVLGPDGSPLGHGRNEREAHGDPTAHAEVLALRDAAGRL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA AI L+R+ R+ YGA++ K G + + +H P Sbjct: 61 GSWRLTGCTLVVTLEPCTMCAGAIVLSRVDRVVYGATDDKAGAVGSLWDVVRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ PG+ + ++ FF+ R Sbjct: 121 EVVPGVLADQCAALLTAFFRAPR 143 >gi|294630214|ref|ZP_06708774.1| cytidine and deoxycytidylate deaminase [Streptomyces sp. e14] gi|292833547|gb|EFF91896.1| cytidine and deoxycytidylate deaminase [Streptomyces sp. e14] Length = 142 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 50/142 (35%), Positives = 74/142 (52%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA+ A ++PVGAV + + ++ N D TAHAE+LAIR + Sbjct: 1 MRLALAEARRAVEGGDVPVGAVVLSADGAVLGAGHNEREATGDPTAHAEVLAIRRAAERV 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPCTMCA A+ L+R+ R+ YGA + K G + +H P Sbjct: 61 GEWRLSGCTLVVTLEPCTMCAGALVLSRVDRVVYGARDEKAGAAGSLWDVVRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 E+ G+ + ++ +FF+ R Sbjct: 121 EVIEGVLAEDCAALLTEFFRAR 142 >gi|87121678|ref|ZP_01077565.1| cytidine/deoxycytidylate deaminase family protein [Marinomonas sp. MED121] gi|86162929|gb|EAQ64207.1| cytidine/deoxycytidylate deaminase family protein [Marinomonas sp. MED121] Length = 162 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 64/142 (45%), Positives = 85/142 (59%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A AA E+PVGA+ VL+N+II N D TAHAEI AIR C+ ++ Sbjct: 1 MERALVLADKAATEGEVPVGAILVLDNEIIGEGYNSPISTCDPTAHAEIQAIRDACKNVA 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 LP+ LYVTLEPC+MCA AI ARI R+ Y A+ PK G +E+ QF+ +HS + Sbjct: 61 NYRLPKATLYVTLEPCSMCAGAIVHARIARVVYAATEPKSGVVESQNQFFEQDFLNHSVK 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ + Q + DFF+ RR Sbjct: 121 VEAGVLGPFASQKLSDFFQYRR 142 >gi|296111508|ref|YP_003621890.1| hypothetical protein LKI_06910 [Leuconostoc kimchii IMSNU 11154] gi|295833040|gb|ADG40921.1| hypothetical protein LKI_06910 [Leuconostoc kimchii IMSNU 11154] Length = 164 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 61/148 (41%), Positives = 86/148 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ + FM AL EAQ A E+P+GAV V +N+II+RA N + TAHAE++AI Sbjct: 10 EQIDYFMQVALNEAQLADEAGEVPIGAVIVKDNEIIARAHNHREAHQLATAHAELVAIES 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 IL+ L L+VTLEPC MCA AI ARI +Y+GA++ KGGG + Sbjct: 70 ANHILNSWRLENTALFVTLEPCIMCAGAIINARIPTVYFGAADSKGGGTRSLYHLLEDDR 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E++P I +++QDFF + R Sbjct: 130 LNHRVEVHPDIRASEGGRLLQDFFGKIR 157 >gi|56459694|ref|YP_154975.1| cytosine/adenosine deaminase putative [Idiomarina loihiensis L2TR] gi|56178704|gb|AAV81426.1| Cytosine/adenosine deaminase putative [Idiomarina loihiensis L2TR] Length = 150 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 54/142 (38%), Positives = 82/142 (57%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALE A+ A +E+PVGAV V+++KI+ N+ L D +AHAE AIR + + Sbjct: 1 MQRALELAEQAQNADEVPVGAVLVMDDKIVGEGYNQVISLSDPSAHAEAQAIRSAGQAID 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L LYVTLEPC MCA I+ AR++RL +GA++P+ G + A+ +H + Sbjct: 61 NYRLVNATLYVTLEPCAMCAGLITHARVKRLVFGATDPRTGATGTAIEVINHASMNHKVD 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ + I++ FF+ RR Sbjct: 121 VESGVLAEECGDILRRFFRARR 142 >gi|116669211|ref|YP_830144.1| tRNA-adenosine deaminase [Arthrobacter sp. FB24] gi|116609320|gb|ABK02044.1| tRNA-adenosine deaminase [Arthrobacter sp. FB24] Length = 167 Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats. Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 7/154 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M AL EA+ A ++P+GA+ + + I+ N D TAHAE++AIR Sbjct: 7 RHAEWMGLALAEARRALGTGDVPIGAIVIGPDGDILGTGRNEREAHGDPTAHAEMVAIRE 66 Query: 62 GCRILSQ------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 L L E L VTLEPC MCA A+ LARI R+ +GA + K G + Sbjct: 67 AAARLQSLPQGDGWRLAECTLVVTLEPCAMCAGAVVLARIPRVVFGAWDEKAGAAGSVFD 126 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+Y G+ EQ ++++FF R Sbjct: 127 ILRERRLNHWVEVYAGVREQECADLLREFFAGHR 160 >gi|332637118|ref|ZP_08415981.1| tRNA-adenosine deaminase [Weissella cibaria KACC 11862] Length = 181 Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats. Identities = 56/145 (38%), Positives = 84/145 (57%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EA+ A E+P+GAV V + +II R N L+D + HAE+ AI R Sbjct: 10 DYFMGEAIKEAKKAGALGEVPIGAVVVQHGEIIGRGFNLRERLEDASQHAELQAITEANR 69 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 ++ LP+ L+VTLEPC MCA I +RI +YYGA +PK G + + +H Sbjct: 70 LVKSWRLPDAQLFVTLEPCIMCAGIIQQSRISDVYYGAEDPKAGAVHSMYHILEDERLNH 129 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ GI EQ S ++++FF+E R Sbjct: 130 QVHVHQGIREQESGDMLRNFFREIR 154 >gi|307825441|ref|ZP_07655660.1| CMP/dCMP deaminase zinc-binding [Methylobacter tundripaludum SV96] gi|307733616|gb|EFO04474.1| CMP/dCMP deaminase zinc-binding [Methylobacter tundripaludum SV96] Length = 142 Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats. Identities = 55/142 (38%), Positives = 78/142 (54%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ AQ A + E+PVGA+ V +N+ I+ N D TAHAE++A+R + Sbjct: 1 MRHAIRLAQRAEQQGEVPVGAIVVRDNRCIAEGWNIPITSHDPTAHAEVVAMRGAGVHVQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MC A+S ARI+RL +GA +PK G + N +H Sbjct: 61 NYRLNDATLYVTLEPCVMCIGAMSHARIKRLVFGAYDPKRGAVCNALSLTDAPFLNHRIS 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 G+ E ++++DFFK RR Sbjct: 121 WDGGVLETECSEMLRDFFKARR 142 >gi|330443784|ref|YP_004376770.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila pecorum E58] gi|328806894|gb|AEB41067.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila pecorum E58] Length = 156 Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 85/149 (57%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K FM+ AL+EA+ A ++E+PVG V V ++KII+R N +L+D TAHAEIL I Sbjct: 3 IEKNLFFMNEALKEARKAYSQDEVPVGCVLVKDDKIIARGHNSVEKLQDPTAHAEILCIG 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L LY TLEPC MCA AI LARI R+ +GA + + G + + Sbjct: 63 AAAEFVQNWRLVNTTLYCTLEPCLMCAGAIQLARISRVVWGAPDLRLGACGSWINVFAQK 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H+ E I + S ++++ FF E+R Sbjct: 123 HPFHTVEC-SKIYCEESERLMKQFFIEKR 150 >gi|255261482|ref|ZP_05340824.1| tRNA-specific adenosine deaminase [Thalassiobium sp. R2A62] gi|255103817|gb|EET46491.1| tRNA-specific adenosine deaminase [Thalassiobium sp. R2A62] Length = 147 Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats. Identities = 75/143 (52%), Positives = 94/143 (65%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+A+ A R E+PVGAV V + K+++ GNR RE D TAHAE+LAIR C Sbjct: 5 FMDQALEQARLAGARGEVPVGAVVVADGKVVAAQGNRTRERNDPTAHAEVLAIREACAAA 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPC MCA IS ARI RLYYGA +PK GGI G + +T + CHH P Sbjct: 65 GSERLVGHDLYVTLEPCPMCATVISNARIARLYYGAGDPKSGGIVQGPRIFTHSQCHHVP 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GI + + ++++ FF R Sbjct: 125 EVYDGIGAEAASEMLRAFFAGLR 147 >gi|296455106|ref|YP_003662250.1| CMP/dCMP deaminase [Bifidobacterium longum subsp. longum JDM301] gi|296184538|gb|ADH01420.1| CMP/dCMP deaminase, zinc-binding protein [Bifidobacterium longum subsp. longum JDM301] Length = 174 Score = 202 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 55/150 (36%), Positives = 75/150 (50%), Gaps = 2/150 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59 M+ M ALE A AA ++PVGAV + +I+ R N D AHAEI+A+ Sbjct: 26 MEYDEA-MRRALELAGQAAAAGDVPVGAVVLDAAGQIVGRGYNTREADGDPLAHAEIIAM 84 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + L L + L VTLEPC MCA A I + +GA +PK G + Sbjct: 85 RQAAQALGAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRD 144 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 HSPE++ G+ E + I+ DFF +RR Sbjct: 145 PHIGHSPEVHGGVLEGECQSILTDFFAQRR 174 >gi|325298404|ref|YP_004258321.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides salanitronis DSM 18170] gi|324317957|gb|ADY35848.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides salanitronis DSM 18170] Length = 144 Score = 202 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 82/149 (55%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL EA+ A+ R E+PVGAV V +II+RA N L DVTAHAE+ AI Sbjct: 1 MADDTFYMKQALAEAEKASARGEVPVGAVVVCQGRIIARAHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L + LYVT+EPC MCA AI+ A++ +L +GA + K G Y A Sbjct: 61 AAANALGAKYLNDCTLYVTVEPCVMCAGAIAWAQLGKLVFGAGDEKRG-----YMRYAPA 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ + ++ FF++RR Sbjct: 116 ALHPKTEVVSGVLKDECAGLMTAFFRKRR 144 >gi|288802991|ref|ZP_06408427.1| cytidine/deoxycytidylate deaminase family protein [Prevotella melaninogenica D18] gi|302345191|ref|YP_003813544.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella melaninogenica ATCC 25845] gi|288334508|gb|EFC72947.1| cytidine/deoxycytidylate deaminase family protein [Prevotella melaninogenica D18] gi|302149710|gb|ADK95972.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella melaninogenica ATCC 25845] Length = 150 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 63/148 (42%), Positives = 83/148 (56%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 KK FM AL EA+ A EIP+GAV V ++II+RA N L DVTAHAE+ AI M Sbjct: 8 KKDLYFMQRALAEAEAAYKEGEIPIGAVVVCRDRIIARAHNLTETLNDVTAHAEMQAITM 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L + LYVT+EPC MCA AI A+++R+ YG + K G Y Sbjct: 68 AANELGGKYLQDCTLYVTVEPCIMCAGAIGWAQLQRIVYGCPDEKRG-----YHEYAPKA 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E+ R ++Q FF+ERR Sbjct: 123 FHPKANVTYGVMEEECRALMQRFFQERR 150 >gi|311112334|ref|YP_003983556.1| tRNA-adenosine deaminase [Rothia dentocariosa ATCC 17931] gi|310943828|gb|ADP40122.1| tRNA-adenosine deaminase [Rothia dentocariosa ATCC 17931] Length = 176 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 73/148 (49%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M AL+E + AA EIP+GAV V +II N D T HAEI AIR Sbjct: 24 EHERWMRLALDEGKRAACAGEIPIGAVVVNAEGEIIGSGHNSREHDHDPTGHAEIHAIRQ 83 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L E L VT+EPC MCA AI +ARI + GA K G + + Sbjct: 84 AAQHLKTWRLEECTLVVTVEPCLMCAGAILMARIPTVVMGAWEEKTGAVGSQYDVLRDRR 143 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 ++Y G+ + ++++ FF+ RR Sbjct: 144 LGLDVQVYAGVLREECAELMRTFFEVRR 171 >gi|1296969|emb|CAA65178.1| orf150 [Porphyromonas gingivalis] Length = 150 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 62/148 (41%), Positives = 82/148 (55%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M ALEEA+ AA EIP+GAV V +I++RA NR L D TAHAE+LAI M Sbjct: 8 TDDIRYMRIALEEARAAADEGEIPIGAVIVCKGQIVARAHNRVERLNDPTAHAEMLAITM 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + L + LYVT+EPC MCA A+ +I R+ YGAS PK G + +T Sbjct: 68 AVDAIGGKYLRDCTLYVTVEPCLMCAGALRWTQIPRVVYGASEPKVG-----YRLFTDHA 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI S +++ FF ERR Sbjct: 123 LHPKCLVEGGILADESENLMRSFFAERR 150 >gi|329943103|ref|ZP_08291877.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Chlamydophila psittaci Cal10] gi|332287685|ref|YP_004422586.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila psittaci 6BC] gi|325506881|gb|ADZ18519.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila psittaci 6BC] gi|328814650|gb|EGF84640.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Chlamydophila psittaci Cal10] Length = 148 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 57/142 (40%), Positives = 80/142 (56%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M+ AL+EA+ A +E+PVG V V +NKII+R N +L+D TAHAEIL I + L Sbjct: 1 MNQALKEARQAYDEDEVPVGCVIVKDNKIIARGHNTTEKLQDPTAHAEILCIGAAAQYLE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LY TLEPC MCA AI ARIRR+ + A + + G + + H E Sbjct: 61 NWRLVDTVLYCTLEPCLMCAGAIQQARIRRIVWAAPDLRLGAGGSWINVFKEKHPFHQVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 GI + + Q+++ FF +R Sbjct: 121 CCSGICREDAEQLMKQFFIGKR 142 >gi|21673220|ref|NP_661285.1| cytosine deaminase, putative [Chlorobium tepidum TLS] gi|21646303|gb|AAM71627.1| cytosine deaminase, putative [Chlorobium tepidum TLS] Length = 152 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 59/150 (39%), Positives = 80/150 (53%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59 M N M A EA A E+PVGAV + N II R N+ L D TAHAE++A+ Sbjct: 1 MSDLNHCMELAFREAIKAYESKEVPVGAVVLDPNGLIIGRGYNQVETLSDATAHAEMIAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + + L L VTLEPC MCA AI L++I R+ +GA +PK G Sbjct: 61 TSAMATIGSKYLEGCTLAVTLEPCPMCAGAIVLSKISRVVFGAWDPKMGAAGTVLNITAC 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+Y GI E+++ ++QDFF+ R Sbjct: 121 NALNHQPEVYGGIMERKAESLLQDFFRGLR 150 >gi|222053168|ref|YP_002535530.1| CMP/dCMP deaminase zinc-binding [Geobacter sp. FRC-32] gi|221562457|gb|ACM18429.1| CMP/dCMP deaminase zinc-binding [Geobacter sp. FRC-32] Length = 161 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M A+ +A+ AA R E+P+GAV V + KII+R N ++D +AHAE++AIR Sbjct: 5 RDDAFWMGKAIAQAEKAAARGEVPIGAVIVRDGKIIARGHNLREGMQDPSAHAELIAIRR 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G + L LYVTLEPC MC AI LAR+ ++ +G +PKGG + + Sbjct: 65 GAKKNGNWRLLGTTLYVTLEPCLMCMGAILLARVEKVVFGCHDPKGGAAGSLYNLSDDSR 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E ++ DFF R Sbjct: 125 LNHRVTLVSGIREAECAALLSDFFAALR 152 >gi|118444046|ref|YP_879269.1| cytidine/deoxycytidylate deaminase family protein, pytative [Clostridium novyi NT] gi|118134502|gb|ABK61546.1| cytidine/deoxycytidylate deaminase family protein, pytative [Clostridium novyi NT] Length = 147 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 60/146 (41%), Positives = 84/146 (57%), Gaps = 1/146 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL+EA+ AAL++E+PVGAV V N ++I+ A N L D TAHAEILAI+ Sbjct: 2 DKKFMEIALDEAKIAALKDEVPVGAVIVKNGEVIASAHNLRETLNDPTAHAEILAIKKAS 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 IL L E ++YVTLEPC MC+ AI +RIR+LY G +P G + Sbjct: 62 SILKNWRLNECEMYVTLEPCPMCSGAILQSRIRKLYIGTIDPSMGCCGSVVDLVQNRYLK 121 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 + +I ++ R I+ +FF+ +R Sbjct: 122 TALDIKW-FNDDRCSSILTNFFRSKR 146 >gi|157964979|ref|YP_001499803.1| cytosine deaminase [Rickettsia massiliae MTU5] gi|157844755|gb|ABV85256.1| Cytosine deaminase [Rickettsia massiliae MTU5] Length = 190 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 66/148 (44%), Positives = 96/148 (64%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL++A+ A +NE+PVGAV V N KII+ N + HAEI+AI Sbjct: 14 NNFFMEQALKQAKIAFDKNEVPVGAVIVDRLNQKIIASTHNNTEAKNNALYHAEIIAINE 73 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+ +++ + Sbjct: 74 ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSSA 133 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C H PEIY GI + S ++++FFK R Sbjct: 134 CFHRPEIYSGILAEDSGLLMKEFFKRIR 161 >gi|332880818|ref|ZP_08448489.1| cytidine and deoxycytidylate deaminase zinc-binding region [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681201|gb|EGJ54127.1| cytidine and deoxycytidylate deaminase zinc-binding region [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 144 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 62/149 (41%), Positives = 84/149 (56%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M ALEEA+ A +EIPVGAV V ++I++RA N L DVTAHAE+ I Sbjct: 1 MATDAFYMKKALEEARRAYEEDEIPVGAVVVCGDRILARAHNLTETLTDVTAHAEMQVIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L E LYVTLEPC MCA AI A+++RL YGA++ K G + + Sbjct: 61 AAANALGGKYLNECTLYVTLEPCVMCAGAIGWAQVKRLVYGATDEKRG-----YRMFAPQ 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ S +++DFFK +R Sbjct: 116 AIHPRTEVVSGVMADESMALLKDFFKGKR 144 >gi|168705456|ref|ZP_02737733.1| cytidine/deoxycytidylate deaminase family protein [Gemmata obscuriglobus UQM 2246] Length = 167 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 54/143 (37%), Positives = 75/143 (52%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA AA +E+PVGA+ V +I +A N L D TAHAE++AI L Sbjct: 20 MEMALDEAAVAASEDEVPVGALIVHPELGVIGQAHNMRERLNDPTAHAEMIAITQAATAL 79 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I AR+ + YG ++PK G Q + +H Sbjct: 80 KSWRLEKCILYVTLEPCPMCAGGIVQARVPMVVYGCTDPKAGACHTLFQIASDPRLNHRA 139 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ R + DFF+ +R Sbjct: 140 QVVGGVLADRCAAALTDFFRRKR 162 >gi|262370390|ref|ZP_06063716.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262314732|gb|EEY95773.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 166 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +K + +M ALE+A AA + E+PVGAV V NKII N L D TAHAE+ A+R Sbjct: 5 LKIDSEWMQLALEQAAIAASKGEVPVGAVIVSQNKIIGSGFNAPITLNDPTAHAEVQALR 64 Query: 61 MGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 C+ LP + +YVTLEPCTMC A+ AR+ ++ +GA+ PK G + + + + Sbjct: 65 DACQNTQNYRLPDDAVMYVTLEPCTMCVGALVHARVSKVVFGATEPKAGSLISARKLFET 124 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G ++ Q + FFK RR Sbjct: 125 GYYNHQFLVESGCLHEQCSQQLSHFFKMRR 154 >gi|229530028|ref|ZP_04419418.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae 12129(1)] gi|229333802|gb|EEN99288.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae 12129(1)] Length = 193 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR Sbjct: 27 QDEQFMRRAIALAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + LS L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ Sbjct: 87 GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAA 146 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R +Q FF+ RR Sbjct: 147 YHYATVEKGLLEEECRAQLQAFFQRRR 173 >gi|28895070|ref|NP_801420.1| hypothetical protein SPs0158 [Streptococcus pyogenes SSI-1] gi|28810315|dbj|BAC63253.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] Length = 160 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 53/142 (37%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+EA+ + + EIP+G V V + +II R N E HAE++AI Sbjct: 1 MQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEANAHEG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + L+VT+EPC MC+ AI LARI + YGASN K GG ++ Q T +H + Sbjct: 61 NWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDERLNHRVQ 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ I+Q FF++ R Sbjct: 121 VERGLLAADCANIMQTFFRQGR 142 >gi|194335892|ref|YP_002017686.1| CMP/dCMP deaminase zinc-binding [Pelodictyon phaeoclathratiforme BU-1] gi|194308369|gb|ACF43069.1| CMP/dCMP deaminase zinc-binding [Pelodictyon phaeoclathratiforme BU-1] Length = 155 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 59/150 (39%), Positives = 80/150 (53%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 M M A EA A R E+PVGAV + N +I R N+ L D TAHAE++A+ Sbjct: 1 MMDFAYCMELAFREAIKAFERKEVPVGAVVLDSNGHVIGRGYNQVEALCDSTAHAEMIAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L + L + L VTLEPC MCA AI A++ R+ +GA +PK G Sbjct: 61 TSAMATLGSKYLNDCTLAVTLEPCPMCAGAIVNAKVGRVIFGAYDPKMGAAGTVMNVTGS 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE++ GI E + R ++QDFF+E R Sbjct: 121 RQLNHQPEVFGGIMENKCRNLLQDFFRELR 150 >gi|34540529|ref|NP_905008.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas gingivalis W83] gi|188994633|ref|YP_001928885.1| putative cytosine/adenosine deaminase [Porphyromonas gingivalis ATCC 33277] gi|34396842|gb|AAQ65907.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas gingivalis W83] gi|188594313|dbj|BAG33288.1| putative cytosine/adenosine deaminase [Porphyromonas gingivalis ATCC 33277] Length = 150 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 62/148 (41%), Positives = 82/148 (55%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M ALEEA+ AA EIP+GAV V +I++RA NR L D TAHAE+LAI M Sbjct: 8 TDDIRYMRIALEEARAAADEGEIPIGAVIVCKGQIVARAHNRVERLNDPTAHAEMLAITM 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + L + LYVT+EPC MCA A+ +I R+ YGAS PK G + +T Sbjct: 68 AVDAIGGKYLRDCTLYVTVEPCLMCAGALRWTQIPRVVYGASEPKVG-----YRLFTDHA 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI S +++ FF ERR Sbjct: 123 LHPKCHVEGGILADESENLMRSFFAERR 150 >gi|317120920|ref|YP_004100923.1| tRNA-adenosine deaminase [Thermaerobacter marianensis DSM 12885] gi|315590900|gb|ADU50196.1| tRNA-adenosine deaminase [Thermaerobacter marianensis DSM 12885] Length = 207 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 56/128 (43%), Positives = 73/128 (57%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAVAV + +II+R N L D TAHAEIL +R L L V LYVTLE Sbjct: 63 GEVPVGAVAVHDGRIIARGHNLRERLGDPTAHAEILVLREAAARLGGWRLEGVTLYVTLE 122 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI LAR+ RL YGA +PK G + +H E+ G+ + S ++ Sbjct: 123 PCPMCAGAIVLARVPRLVYGAPDPKAGAAGSLMNLVQHDKLNHRVELRAGVLAEASAALL 182 Query: 142 QDFFKERR 149 + FF++ R Sbjct: 183 RGFFRQLR 190 >gi|297581254|ref|ZP_06943178.1| zinc-binding domain-containing protein [Vibrio cholerae RC385] gi|297534570|gb|EFH73407.1| zinc-binding domain-containing protein [Vibrio cholerae RC385] Length = 193 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR Sbjct: 27 QDEQFMRRAIALAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + LS L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ Sbjct: 87 GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAA 146 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R +Q FF+ RR Sbjct: 147 YHYATVEKGLLEEECRAQLQAFFQRRR 173 >gi|193213141|ref|YP_001999094.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327] gi|193086618|gb|ACF11894.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327] Length = 152 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 59/150 (39%), Positives = 80/150 (53%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59 M N M A EA A E+PVGAV + N +I R N+ L D TAHAE++A+ Sbjct: 1 MSDLNRCMELAFREAIKAYESKEVPVGAVVLDPNGLVIGRGYNQVETLSDATAHAEMIAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L + L L VTLEPC MCA AI L++I R+ +GA +PK G Sbjct: 61 TSAMATLDNKYLEGCTLAVTLEPCPMCAGAIVLSKISRVVFGAWDPKMGASGTVLNVTGC 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +H PE+Y GI E ++ ++QDFF+ R Sbjct: 121 SALNHQPEVYGGIMEHKAESLLQDFFRGLR 150 >gi|312796599|ref|YP_004029521.1| tRNA-specific adenosine deaminase [Burkholderia rhizoxinica HKI 454] gi|312168374|emb|CBW75377.1| tRNA-specific adenosine deaminase (EC 3.5.4.-) [Burkholderia rhizoxinica HKI 454] Length = 173 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 80/147 (54%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM+ A A+ A E+PVGAV V +++I++ N+ D +AHAE++A+R Sbjct: 14 RDLHFMALARAAARRAYAIGEVPVGAVVVRGDEVIAQGFNQPISTHDPSAHAEMVALRAA 73 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + LS +P +LYVTLEPC MCA AI ARI R+ +GA +PK G + ++ Sbjct: 74 AQSLSNYRMPGCELYVTLEPCLMCAGAIMHARIARVVFGAHDPKTGACGSVVDVFSQPRL 133 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + FF ERR Sbjct: 134 NHHTSVVGGVLADECSHELSQFFVERR 160 >gi|260654860|ref|ZP_05860348.1| tRNA-specific adenosine deaminase [Jonquetella anthropi E3_33 E1] gi|260630362|gb|EEX48556.1| tRNA-specific adenosine deaminase [Jonquetella anthropi E3_33 E1] Length = 166 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 71/143 (49%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA+ A E+PVGAV V II R N L D TAHAEI+A+R + L Sbjct: 2 MEQALCEARRAFAGGEVPVGAVVVDEKGNIIGRGYNLRAALHDPTAHAEIVALREAAQAL 61 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L+VTLEPC MCA A+ ARI R+ +G + + G + +H Sbjct: 62 GGWNLSGCSLFVTLEPCPMCAGALVQARIARVVFGCRDERAGACGSLYSILRDGRLNHRC 121 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ R ++Q FF R Sbjct: 122 DVAEGLMADECRSLLQSFFLAAR 144 >gi|222110787|ref|YP_002553051.1| cmp/dcmp deaminase zinc-binding [Acidovorax ebreus TPSY] gi|221730231|gb|ACM33051.1| CMP/dCMP deaminase zinc-binding [Acidovorax ebreus TPSY] Length = 361 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 49/146 (33%), Positives = 74/146 (50%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A+ +A A E+PVGAV V + ++I+ N D TAHAE+ A+R Sbjct: 4 SDDAHWMREAIAQAHAAQQAGEVPVGAVLVRDGQVIATGRNAPIAGHDPTAHAEMAALRA 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G LS L LYVTLEPC MC+ A+ AR+ R+ YGA++ K G + + Sbjct: 64 GAAQLSNYRLDGCTLYVTLEPCAMCSGAMLHARLPRVVYGAADAKTGAAGSVVNLFAEPR 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147 +H + G+ ++ DFF++ Sbjct: 124 LNHQTAVQGGVLADECGALLSDFFRD 149 >gi|93006499|ref|YP_580936.1| CMP/dCMP deaminase, zinc-binding [Psychrobacter cryohalolentis K5] gi|92394177|gb|ABE75452.1| tRNA-adenosine deaminase [Psychrobacter cryohalolentis K5] Length = 197 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 86/148 (58%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M+ AL+ A+ A + E+PVGAV V N +II + N D TAHAEI+A+R Sbjct: 39 EDIKWMTEALKLAKQGAEKEEVPVGAVLVHNQQIIGQGFNEPIGRCDATAHAEIVALRDA 98 Query: 63 CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C L+ LP + LYVTLEPCTMC A+ AR+ RL Y A P+ G + + Sbjct: 99 CTRLNNYRLPLKTTLYVTLEPCTMCMGAMIHARVDRLVYAAHEPRAGVLGSQMNLAEQPF 158 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + S Q+++DFF++RR Sbjct: 159 YNHRMQVDAGLCREHSSQMLKDFFRQRR 186 >gi|325856324|ref|ZP_08172040.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella denticola CRIS 18C-A] gi|325483508|gb|EGC86480.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella denticola CRIS 18C-A] Length = 144 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 62/149 (41%), Positives = 83/149 (55%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKK +M AL+EA A EIPVGAV V ++II+RA N L DVTAHAE+ AI Sbjct: 1 MKKDLYYMQRALDEAGAAYREGEIPVGAVVVCRDRIIARAHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M L + L + LYVT+EPC MCA AI A+ RR+ YG + K G Y Sbjct: 61 MAAGELGGKYLQDCTLYVTVEPCVMCAGAIGWAQFRRIVYGCPDEKRG-----YHLYAPK 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ + + +++ FF+ERR Sbjct: 116 ALHPRADVTYGVMGEECKALMRRFFQERR 144 >gi|319943546|ref|ZP_08017828.1| tRNA-specific adenosine deaminase [Lautropia mirabilis ATCC 51599] gi|319743361|gb|EFV95766.1| tRNA-specific adenosine deaminase [Lautropia mirabilis ATCC 51599] Length = 206 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 51/142 (35%), Positives = 71/142 (50%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + M A+++A NA L E+PVGAV V ++I+ N D TAHAEI +RM Sbjct: 21 DHAMMRLAMDQALNAQLHGEVPVGAVLVKAGQVIATGYNHPIGSHDPTAHAEIRTLRMAA 80 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L + E LYVTLEPC MC A+ ARI R+ +GA +PK G + Sbjct: 81 EQLGNYRVGESTLYVTLEPCMMCLGAMLHARISRVVFGAPDPKTGVCGGVLDLPAEGRLN 140 Query: 124 HSPEIYPGISEQRSRQIIQDFF 145 H + G+ +++Q FF Sbjct: 141 HQTVVQGGLLADECGKLLQRFF 162 >gi|229513031|ref|ZP_04402497.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae TMA 21] gi|254285542|ref|ZP_04960506.1| zinc-binding domain protein [Vibrio cholerae AM-19226] gi|150424404|gb|EDN16341.1| zinc-binding domain protein [Vibrio cholerae AM-19226] gi|229349924|gb|EEO14878.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae TMA 21] Length = 193 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR Sbjct: 27 QDEQFMRRAIALAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + LS L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ Sbjct: 87 GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAA 146 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R +Q FF+ RR Sbjct: 147 YHYATVEKGLLEEECRAQLQAFFQRRR 173 >gi|288926032|ref|ZP_06419961.1| cytidine/deoxycytidylate deaminase family protein [Prevotella buccae D17] gi|288337252|gb|EFC75609.1| cytidine/deoxycytidylate deaminase family protein [Prevotella buccae D17] Length = 147 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 62/149 (41%), Positives = 87/149 (58%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M AL+EA+ A + EIP+GAV V +IISRA N L DVTAHAE+ AI Sbjct: 4 LEVDEQYMRKALQEAEAACQKGEIPIGAVVVCKGRIISRAHNLTETLHDVTAHAEMQAIT 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L + L + LYVT+EPCTMCA AI A++ R+ YGA + K G + Y Sbjct: 64 AAADLLGGKYLTDCTLYVTVEPCTMCAGAIGWAQVPRIVYGAPDEKRG-----YRHYAPH 118 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H +I GI E R+++Q FF+++R Sbjct: 119 AMHPKADIVGGILEDECRELMQKFFRDKR 147 >gi|121594624|ref|YP_986520.1| CMP/dCMP deaminase [Acidovorax sp. JS42] gi|120606704|gb|ABM42444.1| CMP/dCMP deaminase, zinc-binding protein [Acidovorax sp. JS42] Length = 361 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 49/146 (33%), Positives = 75/146 (51%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A+ +A+ A E+PVGAV V + ++I+ N D TAHAE+ A+R Sbjct: 4 SDDAHWMREAIAQARAAQQAGEVPVGAVLVRDGQVIATGRNAPIAGHDPTAHAEMAALRA 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G LS L LYVTLEPC MC+ A+ AR+ R+ YGA++ K G + + Sbjct: 64 GAAQLSNYRLDGCTLYVTLEPCAMCSGAMLHARLPRVVYGAADAKTGAAGSVVNLFAEPR 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147 +H + G+ ++ DFF++ Sbjct: 124 LNHQTAVQGGVLADECGALLSDFFRD 149 >gi|94498766|ref|ZP_01305314.1| CMP/dCMP deaminase, zinc-binding protein [Sphingomonas sp. SKA58] gi|94421775|gb|EAT06828.1| CMP/dCMP deaminase, zinc-binding protein [Sphingomonas sp. SKA58] Length = 152 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 70/142 (49%), Positives = 89/142 (62%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALE A+ A NE+P+GAV + II NRNR D TAHAE++A+R L Sbjct: 11 MRRALELARAAQAANEVPIGAVVTRDGVIIGEGENRNRRDCDPTAHAEMVAMRAAAVRLH 70 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L DL+VTLEPC MCA AIS ARI RLYYGA++PKGG IE G + + C H PE Sbjct: 71 DFRLTGCDLWVTLEPCPMCAGAISHARIARLYYGAADPKGGAIEQGPRLFMQPQCLHRPE 130 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G++E + +++DFF RR Sbjct: 131 VYAGLAEAEASALLRDFFAARR 152 >gi|307941692|ref|ZP_07657047.1| CMP/dCMP deaminase zinc-binding [Roseibium sp. TrichSKD4] gi|307775300|gb|EFO34506.1| CMP/dCMP deaminase zinc-binding [Roseibium sp. TrichSKD4] Length = 262 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 75/129 (58%), Positives = 97/129 (75%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 R E+PVGAV V + K++++ GNR EL D TAHAE+L IR C L+ + LPE DLYVTL Sbjct: 131 RGEVPVGAVLVRDGKVLAKDGNRTLELNDPTAHAEVLVIRAACNTLASQRLPECDLYVTL 190 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA AIS ARIRRLYYGA + KGG +ENGT+F+ TCHH+PE+Y G EQ S ++ Sbjct: 191 EPCPMCAGAISFARIRRLYYGAGDTKGGAVENGTRFFCQPTCHHAPEVYSGFQEQASAEL 250 Query: 141 IQDFFKERR 149 ++ FF+++R Sbjct: 251 LKSFFQKKR 259 >gi|194333451|ref|YP_002015311.1| CMP/dCMP deaminase [Prosthecochloris aestuarii DSM 271] gi|194311269|gb|ACF45664.1| CMP/dCMP deaminase zinc-binding [Prosthecochloris aestuarii DSM 271] Length = 154 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 60/145 (41%), Positives = 79/145 (54%), Gaps = 1/145 (0%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A EA A + EIPVGAV N I+ R N+ L D TAHAEI+A+ Sbjct: 5 YFMEQAFREAIKAYEKKEIPVGAVVFDSNGSIVGRGYNQVEALSDATAHAEIIALTSAMA 64 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + L + L VTLEPC MCA AI A++ RL +GA +PK G +H Sbjct: 65 TLGSKYLSDCTLAVTLEPCPMCAGAIVNAKVGRLIFGAYDPKMGACGTVMNITGNRQLNH 124 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 PE+Y GI E +++ ++QDFF+ R Sbjct: 125 QPEVYGGILEHKAQSLLQDFFRGLR 149 >gi|300742404|ref|ZP_07072425.1| cytidine/deoxycytidylate deaminase family protein [Rothia dentocariosa M567] gi|300381589|gb|EFJ78151.1| cytidine/deoxycytidylate deaminase family protein [Rothia dentocariosa M567] Length = 176 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 72/148 (48%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M AL+E + AA EIP+GAV V +II N D T HAEI AIR Sbjct: 24 EHERWMRLALDEGKRAACAGEIPIGAVVVNAEGEIIGSGHNSREHDHDPTGHAEIHAIRQ 83 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L E L VT+EPC MCA AI +ARI + GA K G + + Sbjct: 84 AAQHLKTWRLEECTLVVTVEPCLMCAGAILMARIPTVVMGAWEEKTGAVGSQYDVLRDRR 143 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 ++Y G+ + +++ FF+ RR Sbjct: 144 LGLDVQVYAGVLREECAGLMRTFFEARR 171 >gi|294635160|ref|ZP_06713669.1| tRNA-specific adenosine deaminase [Edwardsiella tarda ATCC 23685] gi|291091465|gb|EFE24026.1| tRNA-specific adenosine deaminase [Edwardsiella tarda ATCC 23685] Length = 182 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 83/147 (56%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL A+ A + E+PVGAV VL++++I NR D TAHAEI+A++ G Sbjct: 15 DDSYWMRRALALAERARAQGEVPVGAVLVLDDQVIGEGWNRPITRHDPTAHAEIMALQQG 74 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L E LYVTLEPC MCA A+ +RIRRL YGAS+ K G + Sbjct: 75 GAVLQNYRLLEATLYVTLEPCVMCAGAMVHSRIRRLVYGASDLKTGAAGSLLDVLGHPGM 134 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + + DFF++RR Sbjct: 135 NHRIEVCGGVLAEACAAQLSDFFRQRR 161 >gi|126735087|ref|ZP_01750833.1| hypothetical protein RCCS2_14459 [Roseobacter sp. CCS2] gi|126715642|gb|EBA12507.1| hypothetical protein RCCS2_14459 [Roseobacter sp. CCS2] Length = 148 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 79/147 (53%), Positives = 102/147 (69%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ AL+EA+ A R E+PVGAV V + ++++AGN+ RE D TAHAE+LAIR Sbjct: 2 DFRTYMNVALDEARVAGARGEVPVGAVIVGPDGVVAQAGNQTRERSDPTAHAEVLAIRAA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C L QE L DLYVTLEPC MCAAAIS ARI RLYYGA++PK GG+ G + ++ A C Sbjct: 62 CAALGQERLIRCDLYVTLEPCPMCAAAISNARIARLYYGAADPKSGGVAQGPRVFSHAQC 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 HH PE+Y GI + S +++DFF RR Sbjct: 122 HHVPEVYDGIGAKASEALLKDFFAGRR 148 >gi|117929225|ref|YP_873776.1| tRNA-adenosine deaminase [Acidothermus cellulolyticus 11B] gi|117649688|gb|ABK53790.1| tRNA-adenosine deaminase [Acidothermus cellulolyticus 11B] Length = 144 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 56/143 (39%), Positives = 77/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA A ++PVGA+ + ++ R N+ D TAHAEI+A+R L Sbjct: 1 MRLALQEAARAEKVADVPVGAIVLGPGGDVLGRGHNQREAAADPTAHAEIVALRAAAWRL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPCTMCA AI LAR+ RL YGA +PK G + + +H P Sbjct: 61 GRWRLDGCTLVVTLEPCTMCAGAIVLARLDRLVYGAVDPKSGAVGSLWDVVRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ Q+++ FF RR Sbjct: 121 EVIAGVLADECGQVLRTFFSGRR 143 >gi|253998683|ref|YP_003050746.1| CMP/dCMP deaminase zinc-binding [Methylovorus sp. SIP3-4] gi|253985362|gb|ACT50219.1| CMP/dCMP deaminase zinc-binding [Methylovorus sp. SIP3-4] Length = 175 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 61/146 (41%), Positives = 76/146 (52%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL+ AQ AA E+PVGA+ VL+ KII R N D TAHAEI A+R Sbjct: 16 DQAFMQQALQLAQAAADAGEVPVGALVVLDGKIIGRGMNAPIGSHDPTAHAEIQAMREAA 75 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L LYVTLEPC MC+ AI ARI RL YGA +PK G + + + Sbjct: 76 AAIGNYRLVGCTLYVTLEPCAMCSGAIQHARIARLVYGARDPKTGSCGSVIDLMAESRLN 135 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI + ++ FF RR Sbjct: 136 HHTEVAGGILAEECGSMLSRFFSARR 161 >gi|327312523|ref|YP_004327960.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella denticola F0289] gi|326945985|gb|AEA21870.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella denticola F0289] Length = 144 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 62/149 (41%), Positives = 83/149 (55%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK+ +M AL+EA A EIPVGAV V ++II+RA N L DVTAHAE+ AI Sbjct: 1 MKRDLYYMQRALDEAGAAYREGEIPVGAVVVCRDRIIARAHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M L + L + LYVT+EPC MCA AI A+ RR+ YG + K G Y Sbjct: 61 MAAGELGGKYLQDCTLYVTVEPCVMCAGAIGWAQFRRIVYGCPDEKRG-----YHLYAPK 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ + + ++Q FF+ERR Sbjct: 116 ALHPRADVTYGVMGEECKALMQRFFQERR 144 >gi|288800754|ref|ZP_06406211.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp. oral taxon 299 str. F0039] gi|288332215|gb|EFC70696.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp. oral taxon 299 str. F0039] Length = 144 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 67/149 (44%), Positives = 87/149 (58%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK FM+ ALE+AQ A EIPVGAV V +KII+R+ N L DVTAHAE+ AI Sbjct: 1 MKGDEWFMTKALEQAQLALEAGEIPVGAVVVAKDKIIARSHNLTEMLCDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 G L + L E LYVTLEPC MCA AI +++ RL YGAS+ K G + Sbjct: 61 SGTNSLGGKYLNECTLYVTLEPCVMCAGAIGWSQLGRLVYGASDDKRG-----FMRFAPN 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ E+ + IIQ+FF+ +R Sbjct: 116 ALHPKTKVTKGVMEEECKTIIQNFFRSKR 144 >gi|226946009|ref|YP_002801082.1| Cytidine/deoxycytidylate deaminase-like protein [Azotobacter vinelandii DJ] gi|226720936|gb|ACO80107.1| Cytidine/deoxycytidylate deaminase-like protein [Azotobacter vinelandii DJ] Length = 158 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 77/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL A A E+PVGAV V +I+ R N +D +AHAE++AIR Sbjct: 10 SQDEHFMREALVLAAEGAGLGEVPVGAVLVRGGEIVGRGFNCPISRRDPSAHAEMVAIRA 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LP LYVTLEPC+MCA I AR+ R+ +GAS P+ G + F+ Sbjct: 70 AAAALDNYRLPGSTLYVTLEPCSMCAGLIVHARVARVVFGASEPRAGVAVSRGDFFAQDF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H I G+ + I++ FF+ RR Sbjct: 130 LNHRVLIEGGLLAEECGAILKAFFRARR 157 >gi|298491580|ref|YP_003721757.1| CMP/dCMP deaminase zinc-binding protein ['Nostoc azollae' 0708] gi|298233498|gb|ADI64634.1| CMP/dCMP deaminase zinc-binding protein ['Nostoc azollae' 0708] Length = 165 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 76/148 (51%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 K +M+ ALE AQ A E+PVGAV V + +I+ NR +D T HAEI+AIR Sbjct: 16 KHQKWMNHALELAQVAGDAGEVPVGAVIVDAADNLIATGENRKERDQDPTGHAEIMAIRA 75 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L + LYVTLEPC MCA AI AR+ L YG + K G I Sbjct: 76 ASQSLQNWRLDKYTLYVTLEPCPMCAGAIVHARLATLVYGVDDTKTGAIRTVINIPNSPA 135 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ GI E R +Q +F +R Sbjct: 136 SNHPLQVVGGILESACRHQLQTWFTTKR 163 >gi|85717177|ref|ZP_01048135.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Nitrobacter sp. Nb-311A] gi|85696010|gb|EAQ33910.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Nitrobacter sp. Nb-311A] Length = 142 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 80/142 (56%), Positives = 100/142 (70%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALE A+ A E+P+G V V + ++I+ AGNR +D TAHAEILA+R + L Sbjct: 1 MDMALEAAKKAGQAGEVPIGCVIVRDGEVIATAGNRTLTDRDPTAHAEILALRAAAQALG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E L DLYVTLEPCTMCAAAIS ARIRRLYYGAS+PKGG +E+G +F TCHH PE Sbjct: 61 SERLTGCDLYVTLEPCTMCAAAISFARIRRLYYGASDPKGGAVESGVRFLAAPTCHHRPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +YP + E R+ +++DFFK RR Sbjct: 121 VYPSVGESRAAALLRDFFKTRR 142 >gi|115522956|ref|YP_779867.1| CMP/dCMP deaminase, zinc-binding [Rhodopseudomonas palustris BisA53] gi|115516903|gb|ABJ04887.1| tRNA-adenosine deaminase [Rhodopseudomonas palustris BisA53] Length = 148 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 72/129 (55%), Positives = 94/129 (72%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+P+G V V + ++I+ A NR +D TAHAEILAIR L E L + DLYVTL Sbjct: 20 AGEVPIGCVIVRDGEVIATAHNRTLSDRDPTAHAEILAIRQAAASLGSERLVDCDLYVTL 79 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA AISLARIRRLYYGAS+PKGG +E+G +F+ TCHH+PE+Y + E+RS + Sbjct: 80 EPCTMCAGAISLARIRRLYYGASDPKGGAVESGARFFAQPTCHHAPEVYSAVGERRSATL 139 Query: 141 IQDFFKERR 149 +++FF+ RR Sbjct: 140 LREFFQARR 148 >gi|325286553|ref|YP_004262343.1| CMP/dCMP deaminase zinc-binding protein [Cellulophaga lytica DSM 7489] gi|324322007|gb|ADY29472.1| CMP/dCMP deaminase zinc-binding protein [Cellulophaga lytica DSM 7489] Length = 149 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 84/147 (57%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM ALEEAQ A + E+PVGAV V+ ++II+RA N +L DVTAHAE+ AI Sbjct: 6 DDTYFMKKALEEAQAAYDKGEVPVGAVIVIKDRIIARAHNLTEQLNDVTAHAEMQAITSA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L LYVTLEPC MCA A+ ++I ++ Y A + K G T T Sbjct: 66 ANFLGGKYLENCTLYVTLEPCQMCAGALYWSQISKIVYAAKDVKRGFTAMST------TL 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H +I G+ E+ + ++++ FF E+R Sbjct: 120 HPKTKISGGLLEKEASELLKRFFIEKR 146 >gi|310816563|ref|YP_003964527.1| cytidine and deoxycytidylate deaminase family protein [Ketogulonicigenium vulgare Y25] gi|308755298|gb|ADO43227.1| cytidine and deoxycytidylate deaminase family protein [Ketogulonicigenium vulgare Y25] Length = 150 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 74/148 (50%), Positives = 101/148 (68%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M ALEEA+ AA+R E+PVGAV + +II+RAGNR REL D TAHAE+LAIR Sbjct: 2 QFRSYMIHALEEAKLAAMRGEVPVGAVVIGPSGQIIARAGNRTRELHDPTAHAEVLAIRA 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C ++ E L + DLYVTLEPC +CA I+ ARIRRLY+GA +PK GG+ +G + + Sbjct: 62 ACAVIGSERLIDHDLYVTLEPCPICAGTIAAARIRRLYFGAEDPKSGGVLHGARVFNHPQ 121 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 CHH PE+Y + + +++DFF +R Sbjct: 122 CHHRPEVYGDLGAPEAETLLRDFFAAKR 149 >gi|89889508|ref|ZP_01201019.1| cytosine/adenosine deaminase [Flavobacteria bacterium BBFL7] gi|89517781|gb|EAS20437.1| cytosine/adenosine deaminase [Flavobacteria bacterium BBFL7] Length = 149 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 64/147 (43%), Positives = 82/147 (55%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL+EAQ A R EIPVGAV V N+II++ N L DVTAHAE+ AI G Sbjct: 6 DHEYFMKKALQEAQTALDRGEIPVGAVIVTQNRIIAKGHNLTETLTDVTAHAEMQAITAG 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L + LYVTLEPC MCA A+ ++I + YGA + G ++ GTQ Sbjct: 66 ASFLGGKYLKDCTLYVTLEPCQMCAGALYWSQISNIVYGARDEHRGYLKMGTQL------ 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ GI E+ II +FF RR Sbjct: 120 HPKTKVVSGILEEECSAIINEFFTRRR 146 >gi|86608124|ref|YP_476886.1| cytidine and deoxycytidylate deaminase family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556666|gb|ABD01623.1| cytidine and deoxycytidylate deaminase family protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 171 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 57/150 (38%), Positives = 84/150 (56%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59 ++ +M AL EA+ A E+PV A+ V + +++ + NR +D TAHAEILA+ Sbjct: 13 WQRHRAWMQLALREAEQAGEAGEVPVAALVVGPGEKLLALSSNRRERDRDPTAHAEILAL 72 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + L L LYVTLEPC MCA AIS +R+ ++ YGA +PK G + + Sbjct: 73 RQAGQRLGDWQLQGCRLYVTLEPCPMCAGAISQSRLAQVIYGADDPKAGALRSVLNLPAS 132 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A H PE+ G+ E R+++Q +F RR Sbjct: 133 AASFHCPEVIGGVCEAECRRLLQQWFCRRR 162 >gi|158334188|ref|YP_001515360.1| cytidine/deoxycytidylate deaminase region [Acaryochloris marina MBIC11017] gi|158304429|gb|ABW26046.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Acaryochloris marina MBIC11017] Length = 165 Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 75/148 (50%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M A+ A A E+PVGAV + + I+ NR D TAHAEI+A+R Sbjct: 8 EHQQWMEKAIALATQAGAAGEVPVGAVIIGPDGDCIAEGENRRERDHDPTAHAEIVALRA 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 +++ L E LYVTLEPC MCA AI AR+ L YGA +PK G I Sbjct: 68 ASQVIQSWRLHECRLYVTLEPCPMCAGAIIQARLGLLVYGAHDPKTGAIRTVLNLPGSPC 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E RQ +Q++F RR Sbjct: 128 SFHKLPVIAGVLEPTCRQQLQEWFARRR 155 >gi|120437789|ref|YP_863475.1| cytidine/deoxycytidylate deaminase family protein [Gramella forsetii KT0803] gi|117579939|emb|CAL68408.1| cytidine/deoxycytidylate deaminase family protein [Gramella forsetii KT0803] Length = 149 Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 83/147 (56%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM ALEEA++A + EIPVG V V+N+KII+R N L DVTAHAE+ AI Sbjct: 6 NDEYFMKKALEEAESAYEKGEIPVGVVVVINDKIIARGHNLTETLNDVTAHAEMQAITAA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L +Y+TLEPC MCA A+ ++I ++ +GA + + G + G Q Sbjct: 66 ANFLGGKYLQNCTMYITLEPCQMCAGALYWSQISKIVFGAEDSQRGYRKFGVQL------ 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI + + I++ FF E+R Sbjct: 120 HPKTEVKSGIMAEEASSILKRFFIEKR 146 >gi|326693434|ref|ZP_08230439.1| hypothetical protein LargK3_06881 [Leuconostoc argentinum KCTC 3773] Length = 169 Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 58/145 (40%), Positives = 80/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL EA+ AA E+P+GAV V +N+I++RA N + TAHAE+LAI Sbjct: 13 DYFMQVALNEAKLAATEGEVPIGAVIVKDNQIVARAHNHREAHQLATAHAELLAIEAAND 72 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L L+VTLEPC MCA AI AR+ +YYGA + KGG + Q +H Sbjct: 73 ALQSWRLENTALFVTLEPCIMCAGAIINARVPVVYYGADDAKGGATRSLYQLLEDERLNH 132 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++P + ++QDFF + R Sbjct: 133 RVVVHPQVRGDEGGALLQDFFGQIR 157 >gi|261380282|ref|ZP_05984855.1| tRNA-specific adenosine deaminase [Neisseria subflava NJ9703] gi|284796794|gb|EFC52141.1| tRNA-specific adenosine deaminase [Neisseria subflava NJ9703] Length = 240 Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM A+E+A+ +A+ E+PVGAV V + I+ N +V+ HAEI A+ Sbjct: 90 SDMETFMRLAIEQAKQSAVLGEVPVGAVIVYQGEAIAATHNTCIGDHNVSHHAEINALAA 149 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L + D+Y+TLEPC+MCA+A+ AR+ R+ YGA+ K G + + Sbjct: 150 AGKTLQNYRLEDCDVYITLEPCSMCASALIQARVGRVIYGAAEAKTGAAGSVVDLFADKR 209 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + I GI + + ++QDFF +R Sbjct: 210 LNKHTAILGGILAEECQSVLQDFFAAKR 237 >gi|315606353|ref|ZP_07881369.1| tRNA-specific adenosine deaminase [Prevotella buccae ATCC 33574] gi|315252044|gb|EFU32017.1| tRNA-specific adenosine deaminase [Prevotella buccae ATCC 33574] Length = 147 Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 62/149 (41%), Positives = 87/149 (58%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M AL+EA+ A + EIP+GAV V +IISRA N L DVTAHAE+ AI Sbjct: 4 LEIDEQYMRKALQEAEAACQKGEIPIGAVVVCKGRIISRAHNLTETLHDVTAHAEMQAIT 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L + L + LYVT+EPCTMCA AI A++ R+ YGA + K G + Y Sbjct: 64 AAADLLGGKYLTDCTLYVTVEPCTMCAGAIGWAQVPRIVYGAPDEKRG-----YRHYAPH 118 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H +I GI E R+++Q FF+++R Sbjct: 119 AMHPRADIVGGILEDECRELMQKFFRDKR 147 >gi|23466072|ref|NP_696675.1| cytidine and deoxycytidylate deaminase [Bifidobacterium longum NCC2705] gi|213693307|ref|YP_002323893.1| CMP/dCMP deaminase, zinc-binding [Bifidobacterium longum subsp. infantis ATCC 15697] gi|23326799|gb|AAN25311.1| possible cytidine and deoxycytidylate deaminase [Bifidobacterium longum NCC2705] gi|213524768|gb|ACJ53515.1| CMP/dCMP deaminase, zinc-binding [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 158 Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 55/150 (36%), Positives = 75/150 (50%), Gaps = 2/150 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59 M+ M ALE A AA ++PVGAV + +I+ R N D AHAEI+A+ Sbjct: 10 MEYDEA-MRRALELAGQAAAAGDVPVGAVVLDAAGQIVGRGYNTREADGDPLAHAEIIAM 68 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + L L + L VTLEPC MCA A I + +GA +PK G + Sbjct: 69 RQAAQALGAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRD 128 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 HSPE++ G+ E + I+ DFF +RR Sbjct: 129 PHIGHSPEVHGGVLEGECQSILTDFFAQRR 158 >gi|46190701|ref|ZP_00121128.2| COG0590: Cytosine/adenosine deaminases [Bifidobacterium longum DJO10A] gi|189440344|ref|YP_001955425.1| cytosine/adenosine deaminase [Bifidobacterium longum DJO10A] gi|239622901|ref|ZP_04665932.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312133678|ref|YP_004001017.1| cumb [Bifidobacterium longum subsp. longum BBMN68] gi|317482318|ref|ZP_07941338.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bifidobacterium sp. 12_1_47BFAA] gi|189428779|gb|ACD98927.1| Cytosine/adenosine deaminase [Bifidobacterium longum DJO10A] gi|239514898|gb|EEQ54765.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291517778|emb|CBK71394.1| tRNA-adenosine deaminase [Bifidobacterium longum subsp. longum F8] gi|311772943|gb|ADQ02431.1| CumB [Bifidobacterium longum subsp. longum BBMN68] gi|316916198|gb|EFV37600.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bifidobacterium sp. 12_1_47BFAA] gi|320459488|dbj|BAJ70109.1| putative cytidine/deoxycytidine deaminase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 149 Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 55/150 (36%), Positives = 75/150 (50%), Gaps = 2/150 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59 M+ M ALE A AA ++PVGAV + +I+ R N D AHAEI+A+ Sbjct: 1 MEYDEA-MRRALELAGQAAAAGDVPVGAVVLDAAGQIVGRGYNTREADGDPLAHAEIIAM 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + L L + L VTLEPC MCA A I + +GA +PK G + Sbjct: 60 RQAAQALGAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRD 119 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 HSPE++ G+ E + I+ DFF +RR Sbjct: 120 PHIGHSPEVHGGVLEGECQSILTDFFAQRR 149 >gi|326796823|ref|YP_004314643.1| CMP/dCMP deaminase zinc-binding protein [Marinomonas mediterranea MMB-1] gi|326547587|gb|ADZ92807.1| CMP/dCMP deaminase zinc-binding protein [Marinomonas mediterranea MMB-1] Length = 159 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 67/146 (45%), Positives = 88/146 (60%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 N +M AL A+ AA +EIPVGA+ V N++II R NR D TAHAEI AIR C Sbjct: 3 DNDWMKAALALAEEAAQESEIPVGAIVVQNDEIIGRGFNRPITTCDPTAHAEIQAIRDAC 62 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 ++ LP LYVTLEPC+MCA AI ARI ++ YGA+ PK G E+ +F+ A + Sbjct: 63 ANVNNYRLPGATLYVTLEPCSMCAGAIVHARIEKVVYGATEPKSGVTESQGRFFEQAFLN 122 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ + + Q + FFK RR Sbjct: 123 HKVEVVGGVLAEEASQQLTAFFKFRR 148 >gi|91206241|ref|YP_538596.1| cytosine deaminase [Rickettsia bellii RML369-C] gi|157827858|ref|YP_001496922.1| cytosine deaminase [Rickettsia bellii OSU 85-389] gi|91069785|gb|ABE05507.1| Cytosine deaminase [Rickettsia bellii RML369-C] gi|157803162|gb|ABV79885.1| Cytosine deaminase [Rickettsia bellii OSU 85-389] Length = 152 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 71/151 (47%), Positives = 100/151 (66%), Gaps = 2/151 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILA 58 M N FM AL++A+ A +NE+PVGAV V N KIIS++ N E + HAEI+A Sbjct: 1 MNFDNFFMREALKQAEIAFSKNEVPVGAVIVDRENQKIISKSYNNTEEKNNALYHAEIIA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I CRI+S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+ +++ Sbjct: 61 INEACRIISSKNLSDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFN 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 C H PEIY GI + S +++ FFK+ R Sbjct: 121 SKACFHRPEIYSGIFAEDSALLMKGFFKKIR 151 >gi|78186386|ref|YP_374429.1| cytosine deaminase, putative [Chlorobium luteolum DSM 273] gi|78166288|gb|ABB23386.1| tRNA-adenosine deaminase [Chlorobium luteolum DSM 273] Length = 153 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 82/148 (55%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM A EA+ A E+PVGAV + ++ ++ R N+ L D TAHAEI+A+ Sbjct: 2 DFTYFMELAFREARKAFEAGEVPVGAVVLDASSHVVGRGYNQVETLSDATAHAEIIALTA 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L + L VTLEPC MCA AI A++ R+ +GA +PK G + Sbjct: 62 AMATLGNKYLNDCTLVVTLEPCPMCAGAIVNAKVGRVVFGAYDPKMGAAGSVLNVTGCRA 121 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE++ GI E R++ ++QDFF E R Sbjct: 122 LNHQPEVFGGIMEARAQGLLQDFFAELR 149 >gi|159028687|emb|CAO88158.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 143 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A R ++PVGAV V +I++ N + D TAHAEILAIR ++L Sbjct: 1 MQLALNLAATAGDRGDVPVGAVIVDKQGHLIAQGANCKEKHHDPTAHAEILAIRAASQVL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA AI AR+ L YGA +PK G I F +H Sbjct: 61 GNWHLNGCTLYVTLEPCPMCAGAIIQARLGLLVYGADDPKTGVIRTVANFMDSPFSNHRL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI + S +++Q +F+++R Sbjct: 121 PVIAGILAKESGELLQTWFEKKR 143 >gi|118595115|ref|ZP_01552462.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Methylophilales bacterium HTCC2181] gi|118440893|gb|EAV47520.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Methylophilales bacterium HTCC2181] Length = 149 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 61/142 (42%), Positives = 81/142 (57%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ A +E+PVGAV V +N II R N + D T HAE+ AIR R + Sbjct: 1 MQEALAMAKIAYANHEVPVGAVIVNDNIIIGRGCNELIQKNDPTGHAEMHAIREAARTIK 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L D+YVTLEPC MC AI +RI+ L++GA + K G E+ + T +H Sbjct: 61 NYRLTNCDIYVTLEPCPMCIGAIFNSRIKNLFFGAYDHKTGVCESVVNLGSFKTLNHHCN 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I+ GI E S+ I+Q FF+ERR Sbjct: 121 IFGGILENESKNILQKFFRERR 142 >gi|325954716|ref|YP_004238376.1| CMP/dCMP deaminase zinc-binding protein [Weeksella virosa DSM 16922] gi|323437334|gb|ADX67798.1| CMP/dCMP deaminase zinc-binding protein [Weeksella virosa DSM 16922] Length = 146 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 62/147 (42%), Positives = 83/147 (56%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL+EAQ A R+EIPVGA+ V NKII++ N L DVTAHAE+ AI Sbjct: 6 SDEYFMRKALQEAQVAFDRDEIPVGALIVSQNKIIAKTHNLTETLTDVTAHAEMQAITSA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L + LYVTLEPC MCA A+ ++I R+ GAS+ K G + Sbjct: 66 ANYLGGKYLKDCTLYVTLEPCVMCAGALYWSQISRIVIGASDEKRGFRSQLVKL------ 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H +I G+ + S ++IQ FFK++R Sbjct: 120 HPKTQITEGVLAKESTELIQKFFKDKR 146 >gi|326560079|gb|EGE10469.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis 46P47B1] gi|326561665|gb|EGE12002.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis 103P14B1] gi|326565806|gb|EGE15968.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis BC1] gi|326570459|gb|EGE20499.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis BC8] gi|326573436|gb|EGE23404.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis 101P30B1] Length = 181 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + M+ ALE A+ A EIPVGAV V +I+ N +D TAHAEI+A+R Sbjct: 24 RDVEMMNRALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRA 83 Query: 63 CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C L+ LP LYVTLEPCTMC A+ ARI R+ +GA PK G + + + Sbjct: 84 CETLNNYRLPKGCILYVTLEPCTMCFGALIHARISRVVFGAFEPKAGVVVSQLKLPEQVF 143 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +Y G+ +S ++ FF++RR Sbjct: 144 YNHHLSVYGGLLADKSSALLSGFFRQRR 171 >gi|104783359|ref|YP_609857.1| cytidine/deoxycytidylate deaminase [Pseudomonas entomophila L48] gi|95112346|emb|CAK17073.1| putative cytidine/deoxycytidylate deaminase [Pseudomonas entomophila L48] Length = 145 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 58/142 (40%), Positives = 80/142 (56%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALE A A E+PVGAV V + ++I + NR D +AHAE++AIR + S Sbjct: 1 MRLALELAAQGAALGEVPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRAAAKSAS 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ +H Sbjct: 61 NYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRVM 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 G+ Q I+ +FFK RR Sbjct: 121 FEGGVLAQECGAILSEFFKARR 142 >gi|304311855|ref|YP_003811453.1| Cytidine/deoxycytidylate deaminase, zinc-binding protein [gamma proteobacterium HdN1] gi|301797588|emb|CBL45809.1| Cytidine/deoxycytidylate deaminase, zinc-binding protein [gamma proteobacterium HdN1] Length = 171 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 54/147 (36%), Positives = 76/147 (51%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL A+ A E+PVGAV V + + I N D TAHAEI A+R Sbjct: 18 EDRRWMERALALARQGAEAGEVPVGAVVVRDGEAIGEGFNCPIGTHDPTAHAEICALRAA 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R + L LYV+LEPC MCA AI ARI R+ Y A PK G + + F+ Sbjct: 78 GRAIENYRLAGATLYVSLEPCAMCAGAIVHARIDRVVYAAMEPKAGAVASTQNFFEQPQL 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 ++ + G+ Q + + ++ FFK+RR Sbjct: 138 NYRVKAEGGLLNQEAGEQLRTFFKDRR 164 >gi|119775487|ref|YP_928227.1| cytidine/deoxycytidylate deaminase family protein [Shewanella amazonensis SB2B] gi|119767987|gb|ABM00558.1| tRNA-adenosine deaminase [Shewanella amazonensis SB2B] Length = 190 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 55/146 (37%), Positives = 77/146 (52%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FMS ALE A+ A R E+PVGAV V +I+ N N L D +AHAE+ +R Sbjct: 27 DKHFMSLALEAAKEAEARGEVPVGAVLVREGLVIATGYNHNIGLNDPSAHAEMQCLREAG 86 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R+L L + LYVTLEPC MCA + +RI RL +GA + K G + + Sbjct: 87 RMLGNYRLLDTTLYVTLEPCAMCAGVMVHSRIERLVFGAKDEKTGAAGSVVDLVRHPAFN 146 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ + ++ DFF+ RR Sbjct: 147 HQIQVEEGVLAEECSGMLSDFFRRRR 172 >gi|119485470|ref|ZP_01619798.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lyngbya sp. PCC 8106] gi|119457226|gb|EAW38352.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lyngbya sp. PCC 8106] Length = 161 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 79/149 (53%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M ALE A++A E+PVGAV + ++++ A NR D TAHAEIL +R Sbjct: 5 TTHCHWMKRALELARSAGEAGEVPVGAVIINPQGQLLAEAENRRERDNDPTAHAEILVLR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + LYVTLEPC MCA AI ARI+ L YG +PK G I A Sbjct: 65 QAGQKLKDWHLNQCTLYVTLEPCPMCAGAIVQARIQLLVYGVDDPKTGTIRTVANIPDSA 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ GI E RQ +Q +F +RR Sbjct: 125 YSFHRLQVLGGILESACRQQLQSWFAQRR 153 >gi|51891149|ref|YP_073840.1| putative Cu-binding protein [Symbiobacterium thermophilum IAM 14863] gi|51854838|dbj|BAD38996.1| putative Cu-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 152 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 83/147 (56%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL EA+ AA E+P+GAV V +++I+ R N D TAHAE+LAIR Sbjct: 2 TDEAFMRAALAEAEKAARLGEVPIGAVIVRDSEILVRTHNLRETTHDATAHAEVLAIREA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R+L L LYVT+EPC MCA A+ +RI R+ +GA +PK + +F Sbjct: 62 GRLLGGWRLTGCTLYVTIEPCPMCAGALLQSRIDRVVFGARDPKAWADRSILEFLQNPGL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + ++I+ FF+ERR Sbjct: 122 NHRVEVRDGVLAEACSEVIRQFFRERR 148 >gi|291614449|ref|YP_003524606.1| CMP/dCMP deaminase zinc-binding protein [Sideroxydans lithotrophicus ES-1] gi|291584561|gb|ADE12219.1| CMP/dCMP deaminase zinc-binding protein [Sideroxydans lithotrophicus ES-1] Length = 148 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 52/142 (36%), Positives = 76/142 (53%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+ A+ AA E+PVGAV V + II N D +AHAEI A+R + + Sbjct: 1 MRAALDLARQAAQAGEVPVGAVVVRDGLIIGHGCNAPISRHDPSAHAEIAALRDAAQHIG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + +L+VTLEPC MC A+ ARI R+ +GA +PK G + + +H Sbjct: 61 NYRLVDCELFVTLEPCVMCVGAMFHARIARVVFGAQDPKTGAAGSVFNLFNETRLNHHAR 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I+ G+ + +++ DFF RR Sbjct: 121 IHGGVLAEECGKVLSDFFAMRR 142 >gi|237756081|ref|ZP_04584658.1| tRNA-specific adenosine deaminase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691753|gb|EEP60784.1| tRNA-specific adenosine deaminase [Sulfurihydrogenibium yellowstonense SS-5] Length = 149 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 85/149 (57%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M F+ A++EA+ A +NE+PVGA+ V + KIIS+A N+ + HAEILAI Sbjct: 1 MNYHKKFIDQAVKEAEKALKKNEVPVGAIIVKDGKIISKAHNQRISKNNALYHAEILAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + LY TLEPC MC A+ ARI+++ + A + KGG + + + Sbjct: 61 KACKKLKTWRLDDAVLYTTLEPCLMCTGAVMQARIKKVVFCAKDEKGGAVLSKYTVFDDK 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + E Y I ++R +++++FFK+ R Sbjct: 121 KLPFNVE-YEYIPDERCSKLLKEFFKKLR 148 >gi|294055423|ref|YP_003549081.1| CMP/dCMP deaminase zinc-binding protein [Coraliomargarita akajimensis DSM 45221] gi|293614756|gb|ADE54911.1| CMP/dCMP deaminase zinc-binding protein [Coraliomargarita akajimensis DSM 45221] Length = 181 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + FM+ A EA A ++E+P+GAV +II+ A N++R D TAHAEILAI Sbjct: 17 RNEDYFMAHAFNEAIEAWKKDEVPIGAVIEYEGRIIASAHNQSRSTNDPTAHAEILAISQ 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L E LYVT EPC MC+ A+ +ARI ++YYG + K G + L Sbjct: 77 AANTLGDWRLNECRLYVTKEPCPMCSGALVIARIGKVYYGLPDEKMGCVGGAVDLGALPR 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E G+ E + I++ FF+++R Sbjct: 137 SNHHFESIGGVMEDANHAILKAFFEKKR 164 >gi|28377565|ref|NP_784457.1| cytosine/adenosine deaminase [Lactobacillus plantarum WCFS1] gi|254555738|ref|YP_003062155.1| cytosine/adenosine deaminase [Lactobacillus plantarum JDM1] gi|300769759|ref|ZP_07079641.1| possible guanine deaminase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|28270397|emb|CAD63300.1| cytosine/adenosine deaminase [Lactobacillus plantarum WCFS1] gi|254044665|gb|ACT61458.1| cytosine/adenosine deaminase [Lactobacillus plantarum JDM1] gi|300492667|gb|EFK27853.1| possible guanine deaminase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 168 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 54/142 (38%), Positives = 80/142 (56%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL EA+ A L E+P+GAV V +II R N +D T HAEI+AI+ C Sbjct: 7 EDWMQEALHEARMAYLIGEVPIGAVIVHQGEIIGRGHNLREHGQDATMHAEIIAIQEACE 66 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + LYVTLEPC MC+ AI AR+ LY+GA +PK G + + Q +H Sbjct: 67 YLHSWRLADCQLYVTLEPCLMCSGAIINARLPELYFGARDPKAGAVRSLYQVMDDTRLNH 126 Query: 125 SPEIYPGISEQRSRQIIQDFFK 146 ++ I + + +++++FF+ Sbjct: 127 QVTVHERILARPAGEMLENFFR 148 >gi|322692072|ref|YP_004221642.1| cytidine/deoxycytidine deaminase [Bifidobacterium longum subsp. longum JCM 1217] gi|320456928|dbj|BAJ67550.1| putative cytidine/deoxycytidine deaminase [Bifidobacterium longum subsp. longum JCM 1217] Length = 149 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 56/150 (37%), Positives = 76/150 (50%), Gaps = 2/150 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59 M+ M CALE A AA ++PVGAV + +I+ R N D AHAEI+A+ Sbjct: 1 MEYDEA-MRCALELAGQAAAAGDVPVGAVVLDAAGQIVGRGYNTREADGDPLAHAEIIAM 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + L L + L VTLEPC MCA A I + +GA +PK G + Sbjct: 60 RQAAQALGAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRD 119 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 HSPE++ G+ E + I+ DFF +RR Sbjct: 120 PHIGHSPEVHGGVLEGECQSILTDFFAQRR 149 >gi|225849713|ref|YP_002729947.1| tRNA-specific adenosine deaminase [Persephonella marina EX-H1] gi|225645628|gb|ACO03814.1| tRNA-specific adenosine deaminase [Persephonella marina EX-H1] Length = 154 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + F+ A EEA A ++E+P+GAV V + +II + N+ E + HAEI+AI Sbjct: 1 MSEDIKFLDIAYEEALKAYEKDEVPIGAVIVKDGEIIGKGHNQRIEKNNALYHAEIVAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR L LYVT+EPC MCA AI +RI+++ +GA + KGG + + + + Sbjct: 61 EACRNTGSWRLDGCTLYVTVEPCVMCAGAIMQSRIKKVVFGALDQKGGAVVSKYRLFDDG 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + Y I+ +++ I++DFF +R Sbjct: 121 KLPFKVD-YSLINYEKASIILKDFFLNKR 148 >gi|167755137|ref|ZP_02427264.1| hypothetical protein CLORAM_00641 [Clostridium ramosum DSM 1402] gi|167705187|gb|EDS19766.1| hypothetical protein CLORAM_00641 [Clostridium ramosum DSM 1402] Length = 177 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 2/149 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM A +EA +E+PVGAV V + KII+ N K TAHAEI+AI Sbjct: 26 MDQDLEFMEIAYQEALKCLDMDEVPVGAVIVKDGKIIACGRNLRETSKRATAHAEIIAIE 85 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR L+ L E LYVTLEPC MC+ AI +RI+R+ +GA + + Q + Sbjct: 86 EACRTLNSWYLDECTLYVTLEPCVMCSGAIINSRIQRVVFGAFESRWLALTTIYQ--SDI 143 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P I G+ + ++I+D+FK +R Sbjct: 144 PVNHQPVIVSGVLGDKCSKVIKDYFKNKR 172 >gi|326564207|gb|EGE14443.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis 12P80B1] Length = 184 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + M+ ALE A+ A EIPVGAV V +I+ N +D TAHAEI+A+R Sbjct: 27 RDVEMMNHALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRA 86 Query: 63 CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C L+ LP LYVTLEPCTMC A+ ARI R+ +GA PK G + + + Sbjct: 87 CETLNNYRLPKGCILYVTLEPCTMCFGALIHARISRVVFGAFEPKAGVVVSQLKLPEQVF 146 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +Y G+ +S ++ FF++RR Sbjct: 147 YNHHLSVYGGLLADKSSALLSGFFRQRR 174 >gi|53802428|ref|YP_112823.1| zinc-binding domain-containing protein [Methylococcus capsulatus str. Bath] gi|53756189|gb|AAU90480.1| zinc-binding domain protein [Methylococcus capsulatus str. Bath] Length = 137 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 51/136 (37%), Positives = 75/136 (55%) Query: 14 EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73 A+ A E+P+GAV V N +I+ N+ D TAHAEI+A+R L L + Sbjct: 2 LARTAETAGEVPIGAVLVKNGEILGEGHNQPISTHDPTAHAEIVALRAAGARLGNYRLVD 61 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGIS 133 LYVTLEPC MC AI AR+ RL +GA++P+ G + + +H E+ G+ Sbjct: 62 TTLYVTLEPCAMCMGAILHARVGRLVFGAADPRRGAAISALRLNEAEFMNHRVELLEGVL 121 Query: 134 EQRSRQIIQDFFKERR 149 + Q+++DFF+ RR Sbjct: 122 AEECSQLLRDFFRNRR 137 >gi|229523332|ref|ZP_04412739.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae TM 11079-80] gi|229339695|gb|EEO04710.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae TM 11079-80] Length = 177 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR Sbjct: 11 QDEQFMRRAIALAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + LS L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ Sbjct: 71 GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAA 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R +Q FF+ RR Sbjct: 131 YHYATVEKGLLEEECRAQLQAFFQRRR 157 >gi|313885505|ref|ZP_07819255.1| cytidine and deoxycytidylate deaminase zinc-binding region [Eremococcus coleocola ACS-139-V-Col8] gi|312619235|gb|EFR30674.1| cytidine and deoxycytidylate deaminase zinc-binding region [Eremococcus coleocola ACS-139-V-Col8] Length = 175 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 73/146 (50%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL+EA A + +E+P+GAV V +I+ R N + HAE++AI Sbjct: 15 HETWMQEALKEADKALVLDEVPIGAVLVYQGQIVGRGHNVRESQERALGHAELMAIETAN 74 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L L E LYVTLEPC MCA A+ RI+ + YGAS+ K G + Sbjct: 75 QQLGHWRLEEASLYVTLEPCPMCAGALMNCRIKEVIYGASDLKAGCAGTLMNLLEEDRFN 134 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ EQ + FFK+ R Sbjct: 135 HRAQVIQGVLEQECSHKLSQFFKDLR 160 >gi|16330356|ref|NP_441084.1| hypothetical protein sll1631 [Synechocystis sp. PCC 6803] gi|1652846|dbj|BAA17764.1| sll1631 [Synechocystis sp. PCC 6803] Length = 164 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 81/148 (54%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A+ A+ A EIPVGAV V ++++ NR + ++ AHAE+LAI+ Sbjct: 7 THEDWMQMAIALAEEAGNVGEIPVGAVVVNAMGEVLATGQNRKQRDQNPIAHAEMLAIQT 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 CR L L E LYVTLEPC MC AI AR+ L YG +PK G I++ A Sbjct: 67 ACRRLGHWRLNECTLYVTLEPCPMCTGAIIQARLGLLVYGTPDPKTGTIDSVFDLAASAA 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ +++ R+ +QD+F + R Sbjct: 127 SNHHLQSLGGVCQEQCREQLQDWFAQHR 154 >gi|319901083|ref|YP_004160811.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides helcogenes P 36-108] gi|319416114|gb|ADV43225.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides helcogenes P 36-108] Length = 159 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 80/147 (54%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL EA+ A R E+PVGAV V ++II+RA N L DVTAHAE+ AI Sbjct: 17 DDSYYMKQALLEARKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAA 76 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L E LYVT+EPC MCA AI+ A++ +L +GA + K G Q Y Sbjct: 77 ASTLGGKYLNECTLYVTVEPCVMCAGAIAWAQMGKLVFGAVDEKRG-----YQRYASQAL 131 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI ++++FF +R Sbjct: 132 HPKTIVVQGILADECAALMKEFFAGKR 158 >gi|239980910|ref|ZP_04703434.1| cytidine/deoxycytidine deaminase [Streptomyces albus J1074] Length = 168 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 52/142 (36%), Positives = 74/142 (52%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EAQ A ++PVGAV + + +++S A N D TAHAEILA+R Sbjct: 27 MRQALAEAQRAGRGGDVPVGAVVLDPDGRLLSAAHNEREADGDPTAHAEILALRRAAARS 86 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L VTLEPCTMCA A +R+ R+ YGA + K G + +H P Sbjct: 87 GRWRLTDCTLVVTLEPCTMCAGAAVQSRVDRVVYGARDEKAGAAGSLWDVVRDRRLNHRP 146 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 E+ G+ ++ +FF+ R Sbjct: 147 EVIEGVLAADCAALLTEFFRAR 168 >gi|327483608|gb|AEA78015.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae LMA3894-4] Length = 175 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR Sbjct: 9 QDEQFMRRAIALAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + LS L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ Sbjct: 69 GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAA 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R +Q FF+ RR Sbjct: 129 YHYATVEKGLLEEECRAQLQAFFQRRR 155 >gi|238750377|ref|ZP_04611878.1| tRNA-specific adenosine deaminase [Yersinia rohdei ATCC 43380] gi|238711308|gb|EEQ03525.1| tRNA-specific adenosine deaminase [Yersinia rohdei ATCC 43380] Length = 195 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A A E+PVGA+ VL+N++I NR D TAHAEI+A+R G Sbjct: 31 SDEYWMQRALALALRAQAEGEVPVGAILVLDNQVIGEGWNRPIRNNDPTAHAEIMALRQG 90 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + Sbjct: 91 GQAVQNYRLIDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLLDILRHPGM 150 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + + FF+ RR Sbjct: 151 NHQIEVCAGVLAESCSHQLSAFFRLRR 177 >gi|153216547|ref|ZP_01950510.1| zinc-binding domain protein [Vibrio cholerae 1587] gi|124114222|gb|EAY33042.1| zinc-binding domain protein [Vibrio cholerae 1587] Length = 193 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A+ A A + E+PVGAV V + +II+ N + D TAHAEI IR Sbjct: 27 QDEQFMRRAIALAAQAEAQGEVPVGAVLVRDGEIIAEGCNGSITNHDATAHAEIEVIRKA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + LS L + LYVTLEPC MCA A+ +R++R+ YGA + K G ++ Sbjct: 87 GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAA 146 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E+ R +Q FF+ RR Sbjct: 147 YHYATVEKGLLEEECRAQLQAFFQRRR 173 >gi|282880121|ref|ZP_06288841.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella timonensis CRIS 5C-B1] gi|281305994|gb|EFA98034.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella timonensis CRIS 5C-B1] Length = 151 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 64/149 (42%), Positives = 84/149 (56%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +K+ FM AL EAQ A EIP+GAV V +IISRA N L DVTAHAE+LAI Sbjct: 7 LKRDEYFMRKALIEAQAAFDEGEIPIGAVVVCKGQIISRAHNLTERLHDVTAHAEMLAIT 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L + LYVT+EPC MCA+A A++ R+ +GAS+ K G + Y Sbjct: 67 AATNQLGGKYLTDCTLYVTIEPCPMCASACGWAQLSRVVFGASDDKRG-----FKRYAPK 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H EI G+ + ++Q FFK+RR Sbjct: 122 VLHPKAEITNGVLREDCMALMQLFFKKRR 150 >gi|237733437|ref|ZP_04563918.1| tRNA-adenosine deaminase [Mollicutes bacterium D7] gi|229383472|gb|EEO33563.1| tRNA-adenosine deaminase [Coprobacillus sp. D7] Length = 152 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 2/149 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM A +EA +E+PVGAV V + KII+ N K TAHAEI+AI Sbjct: 1 MDQDLEFMEIAYQEALKCLDMDEVPVGAVIVKDGKIIACGRNLRETSKRATAHAEIIAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR L+ L E LYVTLEPC MC+ AI +RI+R+ +GA + + Q + Sbjct: 61 EACRTLNSWYLDECTLYVTLEPCVMCSGAIINSRIQRVVFGAFESRWLALTTIYQ--SDI 118 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P I G+ + ++I+D+FK +R Sbjct: 119 PVNHQPVIVSGVLGDKCSKVIKDYFKNKR 147 >gi|333029805|ref|ZP_08457866.1| CMP/dCMP deaminase zinc-binding [Bacteroides coprosuis DSM 18011] gi|332740402|gb|EGJ70884.1| CMP/dCMP deaminase zinc-binding [Bacteroides coprosuis DSM 18011] Length = 145 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 61/147 (41%), Positives = 86/147 (58%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM AL+EA++A EIPVGAV V + ++I+RA N L DVTAHAE+ AI M Sbjct: 4 DDSYFMKMALQEAESAMKMGEIPVGAVVVSHGQVIARAHNMTERLTDVTAHAEMQAITMA 63 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L + L + LYVTLEPC MCA AIS A++ +L GA++ K G + Sbjct: 64 ADLLGGKYLSDCTLYVTLEPCVMCAGAISWAQLGKLVIGANDSKRG-----YKLLAPDVL 118 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ +S +++Q FF+ RR Sbjct: 119 HPKTEVIEGVLADKSTEMLQSFFRARR 145 >gi|302879427|ref|YP_003847991.1| CMP/dCMP deaminase zinc-binding [Gallionella capsiferriformans ES-2] gi|302582216|gb|ADL56227.1| CMP/dCMP deaminase zinc-binding [Gallionella capsiferriformans ES-2] Length = 240 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 52/128 (40%), Positives = 69/128 (53%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V + +II R N L D +AHAE+ A+R + L L +L+VTLE Sbjct: 96 GEVPVGAVVVKDGQIIGRGYNAPISLHDPSAHAEMQALRAAAQYLGNYRLVGCELFVTLE 155 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI ARIRRL YGAS+ K G + + +H E+ G+ + + Sbjct: 156 PCVMCAGAIMHARIRRLVYGASDFKTGVCGSLLDLFAEQRLNHHTEVAGGVLAEACGATL 215 Query: 142 QDFFKERR 149 FF RR Sbjct: 216 SRFFSLRR 223 >gi|291569301|dbj|BAI91573.1| putative cytidine/deoxycytidylate deaminase [Arthrospira platensis NIES-39] Length = 157 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 75/149 (50%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M AL+ A E+PVGA+ V K+I++ NR D TAHAEI+A+R Sbjct: 6 TTHSHWMQQALKLGAAAGEAGEVPVGALIVNQQGKLIAQGENRRERDPDPTAHAEIIALR 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L LYVTLEPC MCA AI ARI L YG +PK G I Sbjct: 66 QASQVLGDWHLNTCTLYVTLEPCPMCAGAILQARIGLLVYGVDDPKTGSIRTVCNLPDSP 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E RQ +Q +F + R Sbjct: 126 ASYHRLPVLGGILESSCRQQLQSWFAQHR 154 >gi|188996445|ref|YP_001930696.1| CMP/dCMP deaminase zinc-binding [Sulfurihydrogenibium sp. YO3AOP1] gi|188931512|gb|ACD66142.1| CMP/dCMP deaminase zinc-binding [Sulfurihydrogenibium sp. YO3AOP1] Length = 149 Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 86/149 (57%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M F+ A++EA+ A +NE+PVGAV V + KIIS+A N+ + HAEILAI Sbjct: 1 MNYHKKFIDQAVKEAEKALKKNEVPVGAVIVKDGKIISKAHNQRISKNNALYHAEILAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + LY TLEPC MCA A+ ARI+++ + A + KGG + + + Sbjct: 61 KSCKKLKTWRLDDAVLYTTLEPCLMCAGAVMQARIKKVVFCAKDEKGGAVLSKYTVFDDK 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + E Y I ++R +++++FFK+ R Sbjct: 121 KLPFNVE-YEYIPDERCSKLLKEFFKKLR 148 >gi|305665590|ref|YP_003861877.1| putative cytosine/adenosine deaminase [Maribacter sp. HTCC2170] gi|88710346|gb|EAR02578.1| putative cytosine/adenosine deaminase [Maribacter sp. HTCC2170] Length = 149 Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 86/147 (58%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL+EA+ A + E+P+GA+ V++++II+RA N +L DVTAHAE+ AI Sbjct: 6 DDTYFMKKALQEAEAAYEKGEVPIGAIIVIDDRIIARAHNLTEQLNDVTAHAEMQAITAA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L +YVTLEPC MCA A+ ++I ++ +GA + + G GT+ Sbjct: 66 ANFLGGKYLQNCTMYVTLEPCQMCAGALYWSQISKIVFGAKDTERGCGAMGTKL------ 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H +I G+ E + ++++ FF ERR Sbjct: 120 HPKTKITGGVMENEASELLKRFFIERR 146 >gi|323344759|ref|ZP_08084983.1| tRNA-specific adenosine deaminase [Prevotella oralis ATCC 33269] gi|323094029|gb|EFZ36606.1| tRNA-specific adenosine deaminase [Prevotella oralis ATCC 33269] Length = 151 Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 66/148 (44%), Positives = 85/148 (57%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +K FM AL EA+ A EIP+GAV V ++II+RA N L DVTAHAE+ AI Sbjct: 9 QKDEQFMQKALIEAKAAFDAGEIPIGAVIVCKDRIIARAHNLTETLHDVTAHAEMQAITA 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + LPE LYVT+EPCTMCA AI A++RR+ YGA++ K G Y Sbjct: 69 AADALGGKYLPECTLYVTIEPCTMCAGAIGWAQLRRIVYGATDEKRG-----FHKYAPEA 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H I GI EQ R++++ FF +R Sbjct: 124 LHPKATITAGILEQECRELMRQFFLSKR 151 >gi|241203269|ref|YP_002974365.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857159|gb|ACS54826.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 145 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 89/142 (62%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA+ A R E+P+GAV V+++ +SR+GNR RELKDVTAHAEI AIR+ C L Sbjct: 1 MEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRELKDVTAHAEIAAIRLACEALG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 QE L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGGG++NG +FY TCHH+PE Sbjct: 61 QERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGGVDNGVRFYGQPTCHHAPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G +E +S +++ FF +RR Sbjct: 121 VYSGFNEVQSANLLRRFFSQRR 142 >gi|77917942|ref|YP_355757.1| putative deaminase [Pelobacter carbinolicus DSM 2380] gi|77544025|gb|ABA87587.1| tRNA-adenosine deaminase [Pelobacter carbinolicus DSM 2380] Length = 159 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 54/142 (38%), Positives = 72/142 (50%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EA AA E+PVGAV V + II R N D T HAE++AIR + Sbjct: 1 MQEALVEASAAARLGEVPVGAVVVKDGMIIGRGHNLRETSNDPTTHAEMIAIRQAAAAID 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L LYVTLEPC MC AI LARI RL +G+ +P+ G + + +H Sbjct: 61 SWRLIGCTLYVTLEPCVMCMGAIILARIPRLVFGSRDPRVGAVGSIFDLSRDERFNHQVA 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ S ++ FF++ R Sbjct: 121 VTEGVLALESSDMLSGFFRQLR 142 >gi|297620926|ref|YP_003709063.1| tRNA-specific adenosine deaminase [Waddlia chondrophila WSU 86-1044] gi|297376227|gb|ADI38057.1| tRNA-specific adenosine deaminase [Waddlia chondrophila WSU 86-1044] Length = 176 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M AL+EA A ++ E+PVGA+ V K+I+R N+ L+D TAHAE+L I + Sbjct: 17 NEDETYMLAALKEAWKAFVKGEVPVGAILVKEGKVIARGHNQVEMLRDATAHAEMLCITV 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LY T+EPC+MCA A+ L+R+ L +GA + + G + + Sbjct: 77 AEAAEDNWRLNGATLYCTIEPCSMCAGAMLLSRVSTLVWGAPDIRHGANGSWVNLFGKPH 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ GI ++QDFFK+RR Sbjct: 137 PTHEIQVRNGILADFCAMLMQDFFKKRR 164 >gi|270285018|ref|ZP_06194412.1| cytidine/deoxycytidylate deaminase family protein [Chlamydia muridarum Nigg] gi|270289043|ref|ZP_06195345.1| cytidine/deoxycytidylate deaminase family protein [Chlamydia muridarum Weiss] Length = 148 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 57/142 (40%), Positives = 78/142 (54%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+EA+ A +E+PVG + V + II+R N LKD TAHAE++ I L Sbjct: 1 MKKALDEARKAYELDEVPVGCIIVQGDAIIARGHNSVERLKDPTAHAEMICISAAAEYLQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LY TLEPC MCA AI LARI R+ +GA + + G + + H E Sbjct: 61 NWRLKDTTLYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEKHPFHQVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 PGI Q S ++++FF E+R Sbjct: 121 CCPGICHQESEWLMKNFFWEKR 142 >gi|227431250|ref|ZP_03913304.1| tRNA-adenosine deaminase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227353012|gb|EEJ43184.1| tRNA-adenosine deaminase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 168 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ + FM AL EA+ A E+P+GAV V N++I+RA N + TAHAE+LAI Sbjct: 10 EQIDYFMQEALNEAKIAQSEGEVPIGAVIVYENQMIARAHNHREADQLATAHAELLAIES 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L L+VTLEPC MCA AI ARI +YYGA++PKGG + Sbjct: 70 ANTKLKSWRLENTALFVTLEPCIMCAGAIINARIPVVYYGANDPKGGATRSLYSLLEDNR 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++Y GI + S ++Q FF R Sbjct: 130 LNHMVKVYEGIRGEESGLLLQRFFSNIR 157 >gi|170078671|ref|YP_001735309.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Synechococcus sp. PCC 7002] gi|169886340|gb|ACB00054.1| Cytidine and deoxycytidylate deaminase zinc-binding protein [Synechococcus sp. PCC 7002] Length = 158 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 54/146 (36%), Positives = 87/146 (59%), Gaps = 1/146 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M A+ A+ A EIPVGAV V N+ ++++GNR + +D TAHAE+L IR Sbjct: 8 RRHYHWMQKAIALAKVAGQSGEIPVGAVIVDGKNQCLAQSGNRKEKTQDPTAHAEMLVIR 67 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L + LYVTLEPC MCA A+ +R++++ YGA +PK G + + F Sbjct: 68 AASQMRQDWHLQDCTLYVTLEPCPMCAGAMIHSRLKQVVYGADDPKTGALRSMANFPDAP 127 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 +HS + GI+ RQ++Q++F+ Sbjct: 128 FSNHSFPVLGGIAAMECRQLLQNWFQ 153 >gi|322690120|ref|YP_004209854.1| cytidine/deoxycytidine deaminase [Bifidobacterium longum subsp. infantis 157F] gi|320461456|dbj|BAJ72076.1| putative cytidine/deoxycytidine deaminase [Bifidobacterium longum subsp. infantis 157F] Length = 149 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 56/150 (37%), Positives = 76/150 (50%), Gaps = 2/150 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59 M+ M CALE A AA ++PVGAV + +I+ R N D AHAEI+A+ Sbjct: 1 MEYDEA-MRCALELAGQAAAAGDVPVGAVVLDAAGQIVGRGYNTREADGDPLAHAEIIAM 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + L L + L VTLEPC MCA A I + +GA +PK G + Sbjct: 60 RQAAQALGAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRD 119 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 HSPE++ G+ E + I+ DFF +RR Sbjct: 120 PHIGHSPEVHGGVLEVECQSILTDFFAQRR 149 >gi|210623915|ref|ZP_03294124.1| hypothetical protein CLOHIR_02076 [Clostridium hiranonis DSM 13275] gi|210153279|gb|EEA84285.1| hypothetical protein CLOHIR_02076 [Clostridium hiranonis DSM 13275] Length = 371 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 74/149 (49%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM AL EA+ A + E P+GAV V + +II R N LKD TAH+EILAI+ Sbjct: 223 MSDDEYFMMEALREAKKAYDKEETPIGAVIVKDGEIIGRGHNLTEHLKDATAHSEILAIK 282 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L +YVT+EPC MC AI +RIR + GA K IE + F Sbjct: 283 NAAKKLKGWRLFGCKMYVTMEPCVMCCGAIVNSRIREVVIGAKRVKNAKIEKQSDFKKEY 342 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 E G+ E+ ++ FFK R Sbjct: 343 FEDSKVEYKYGVLEEECAGMLGSFFKRLR 371 >gi|225076485|ref|ZP_03719684.1| hypothetical protein NEIFLAOT_01531 [Neisseria flavescens NRL30031/H210] gi|224952164|gb|EEG33373.1| hypothetical protein NEIFLAOT_01531 [Neisseria flavescens NRL30031/H210] Length = 240 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM A+E+A+ +A E+PVGAV V K I+ A N +V+ HAEI A+ Sbjct: 90 SDMEAFMRLAIEQARQSATLGEVPVGAVIVYQGKAIAAAHNTCIGDHNVSHHAEINALAA 149 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L + D+Y+TLEPC+MCA+A+ AR+ R+ YGA+ K G + + Sbjct: 150 AGKALQNYRLEDCDVYITLEPCSMCASALIQARVGRVIYGAAEAKTGAAGSVVDLFADKR 209 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + I I + + ++QDFF +R Sbjct: 210 LNKHTAILGSILAEECQSVLQDFFAAKR 237 >gi|189462552|ref|ZP_03011337.1| hypothetical protein BACCOP_03242 [Bacteroides coprocola DSM 17136] gi|189430713|gb|EDU99697.1| hypothetical protein BACCOP_03242 [Bacteroides coprocola DSM 17136] Length = 144 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 62/149 (41%), Positives = 82/149 (55%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL EAQ AA R E+PVGAV V ++II+R+ N L DVTAHAE+ AI Sbjct: 1 MADDVFYMKQALIEAQKAADRGEVPVGAVVVCRDRIIARSHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y Sbjct: 61 AAANTLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEKRG-----YQRYAPD 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI Q+++ FFK++R Sbjct: 116 ALHPKTVVVKGILADDCAQLMKGFFKKKR 144 >gi|167586888|ref|ZP_02379276.1| CMP/dCMP deaminase, zinc-binding protein [Burkholderia ubonensis Bu] Length = 191 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 75/143 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A A A E+PVGAV V +++I+R N D +AHAE+ A+RM Sbjct: 28 RDTHFMRLAQAAADEARAAGEVPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMA 87 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L +P +LYVTLEPC MCA AI ARI R+ YGA++PK G + + Sbjct: 88 AQHLQNYRMPGCELYVTLEPCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQL 147 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 +H E+ G+ ++ FF Sbjct: 148 NHHTEVVGGVLADECGAALKSFF 170 >gi|71066051|ref|YP_264778.1| tRNA-adenosine deaminase [Psychrobacter arcticus 273-4] gi|71039036|gb|AAZ19344.1| tRNA-adenosine deaminase [Psychrobacter arcticus 273-4] Length = 195 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 85/148 (57%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M+ AL+ A+ A R E+PVGAV V N +II + N D TAHAEI+A+R Sbjct: 37 EDIKWMTEALKLAKQGAEREEVPVGAVLVHNQQIIGQGFNEPIGRCDATAHAEIVALREA 96 Query: 63 CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C L LP + LYVTLEPCTMC A+ AR+ RL Y + P+ G + + Sbjct: 97 CAHLKNYRLPLQTTLYVTLEPCTMCIGALIHARVDRLVYSTNEPRAGMVGSQMNLAAQPF 156 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + S Q+++DFF+ERR Sbjct: 157 YNHHMQVDTGLCREHSSQMLKDFFRERR 184 >gi|318606786|emb|CBY28284.1| tRNA-specific adenosine-34 deaminase [Yersinia enterocolitica subsp. palearctica Y11] Length = 183 Score = 200 bits (509), Expect = 8e-50, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A A E+PVGA+ VL+N++I NR D TAHAEI+A+R G Sbjct: 18 SDEYWMQRALALALRAQAEGEVPVGAILVLDNQVIGEGWNRPIRDNDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +++ L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + Sbjct: 78 GQVVQNYRLIDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLVDILRHPGM 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + FF+ RR Sbjct: 138 NHQIEITAGVMADVCAHQLSAFFRVRR 164 >gi|149923193|ref|ZP_01911606.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein [Plesiocystis pacifica SIR-1] gi|149815967|gb|EDM75483.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein [Plesiocystis pacifica SIR-1] Length = 165 Score = 200 bits (509), Expect = 8e-50, Method: Composition-based stats. Identities = 50/138 (36%), Positives = 72/138 (52%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ AA R ++PVGA+ V + KI+ N + D T HAE++A+R CR Sbjct: 1 MRMAMALGAEAATRGDVPVGALVVRDGKILGVGFNTREQDHDPTGHAEVVAMREACRQAR 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L LYVTLEPC MCA + RI RL YGA + K G + + Q +H E Sbjct: 61 RWRLDGATLYVTLEPCPMCAGTLVNTRIARLVYGAHDAKAGAVRSLYQLCEDPRLNHRLE 120 Query: 128 IYPGISEQRSRQIIQDFF 145 + G+ + +++DFF Sbjct: 121 VVGGVLAEECAALLKDFF 138 >gi|326575668|gb|EGE25591.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis CO72] Length = 181 Score = 200 bits (509), Expect = 8e-50, Method: Composition-based stats. Identities = 57/143 (39%), Positives = 79/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M+ ALE A+ A EIPVGAV V +I+ N +D TAHAEI+A+R C L+ Sbjct: 29 MNRALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRACETLN 88 Query: 68 QEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP LYVTLEPCTMC + ARI R+ +GA PK G + + + +H Sbjct: 89 NYRLPKGCILYVTLEPCTMCFGTLIHARISRVVFGAFEPKAGVVVSQLKLPEQVFYNHHL 148 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +Y G+ +S ++ FF++RR Sbjct: 149 SVYGGLLADKSSALLSGFFRQRR 171 >gi|325281446|ref|YP_004253988.1| CMP/dCMP deaminase zinc-binding protein [Odoribacter splanchnicus DSM 20712] gi|324313255|gb|ADY33808.1| CMP/dCMP deaminase zinc-binding protein [Odoribacter splanchnicus DSM 20712] Length = 145 Score = 200 bits (509), Expect = 8e-50, Method: Composition-based stats. Identities = 66/149 (44%), Positives = 82/149 (55%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL+EA+ AA EIPVGAV V KII+RA N +L DVTAHAE+LAI Sbjct: 1 MTTHEYYMHKALQEARQAAEEGEIPVGAVVVCKGKIIARAHNETEKLNDVTAHAEMLAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M L + L E LYVT+EPCTMCA A+S A++ L GA +P G T Sbjct: 61 MATSYLGGKYLNECTLYVTMEPCTMCAGALSWAQLGELVTGAPDPHRG-----YSRLTPP 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H I GI +I++ FFK +R Sbjct: 116 VLHPKTRITSGILTGECSEIVKQFFKAKR 144 >gi|270294540|ref|ZP_06200742.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270276007|gb|EFA21867.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 144 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 80/147 (54%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL EA A R E+PVGAV V ++II+RA N L DVTAHAE+ AI Sbjct: 2 DDSYYMKQALLEAHKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L E LYVT+EPC MCA AI+ A++ RL +GA + K G Q Y Sbjct: 62 AATLGGKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAEDEKRG-----YQRYASQAL 116 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ GI ++++FF +R Sbjct: 117 HPKTQVVKGILADECAALMKEFFAAKR 143 >gi|218682181|ref|ZP_03529782.1| CMP/dCMP deaminase zinc-binding protein [Rhizobium etli CIAT 894] Length = 145 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 88/142 (61%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA+ A R E+P+GAV V+++ +SR+GNR REL DVTAHAEI AIR+ C L Sbjct: 1 MEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRELNDVTAHAEIAAIRLACEALG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 QE L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGGG++NG +FY TCHH+PE Sbjct: 61 QERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGGVDNGVRFYAQPTCHHAPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G +E +S +I++ FF ++R Sbjct: 121 VYSGFNEVQSAEILRRFFSQKR 142 >gi|15836532|ref|NP_301056.1| cytosine deaminase [Chlamydophila pneumoniae J138] gi|33242370|ref|NP_877311.1| putative cytosine deaminase [Chlamydophila pneumoniae TW-183] gi|8979374|dbj|BAA99208.1| cytosine deaminase [Chlamydophila pneumoniae J138] gi|33236881|gb|AAP98968.1| putative cytosine deaminase [Chlamydophila pneumoniae TW-183] Length = 148 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 56/142 (39%), Positives = 81/142 (57%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A +EA+ A ++E+PVG V V ++KII+RA N +LKD TAHAEIL I + L Sbjct: 1 MQQAFKEARKAYDQDEVPVGCVIVKDDKIIARAHNSVEKLKDATAHAEILCIGSAAQDLD 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LY TLEPC MCA AI LARI R+ + A + + G + +T H+ Sbjct: 61 NWRLLDTVLYCTLEPCLMCAGAIQLARIPRIVWAAPDVRLGAGGSWVNIFTEEHPFHTVS 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 G+ + + +++ FF E+R Sbjct: 121 CTGGVCSEEAEHLMKKFFVEKR 142 >gi|320095329|ref|ZP_08027018.1| tRNA-specific adenosine deaminase [Actinomyces sp. oral taxon 178 str. F0338] gi|319977741|gb|EFW09395.1| tRNA-specific adenosine deaminase [Actinomyces sp. oral taxon 178 str. F0338] Length = 443 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A A ++PVGAV + +++ + N + +D HAEI+A+R R L Sbjct: 11 MGKALYLADRARETGDVPVGAVVLDTLGRVVGKGWNCREKDRDPAGHAEIVALRDAARTL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L V+LEPCTMCA AI AR+ R+ +GA +PK G + + +H Sbjct: 71 KRWNLVGCTLVVSLEPCTMCAGAIVSARVDRVVFGAWDPKAGAAGSVRDVLRDSRLNHQV 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + ++ FF +R Sbjct: 131 EVVGGVLGHEAAMQLRSFFAGKR 153 >gi|255067649|ref|ZP_05319504.1| tRNA-specific adenosine deaminase [Neisseria sicca ATCC 29256] gi|255048123|gb|EET43587.1| tRNA-specific adenosine deaminase [Neisseria sicca ATCC 29256] Length = 243 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 60/145 (41%), Positives = 80/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL +A+ +A EIPVGAV V NN+II+ A N D++ HAEI A+ Sbjct: 96 ETFMRAALTQAEQSASIGEIPVGAVVVSNNQIIAAAHNTCVSDHDISRHAEIRALAAAGA 155 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L DLY+TLEPC MCA+AI AR+RR+ YGA+ PK G + + + Sbjct: 156 ALQNYRLDGCDLYITLEPCAMCASAIIQARVRRVIYGAAEPKTGAAGSVVNLFANPLLNK 215 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 I GI E + ++Q FF+ RR Sbjct: 216 HTAIKGGILEDECKAVLQAFFQTRR 240 >gi|255007517|ref|ZP_05279643.1| cytosine deaminase [Bacteroides fragilis 3_1_12] gi|313145211|ref|ZP_07807404.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313133978|gb|EFR51338.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 145 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 80/149 (53%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM AL EA A R E+PVGAV V +II+RA N L DVTAHAE+ AI Sbjct: 1 MLDDSYFMKQALVEAAKAGERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y Sbjct: 61 AAANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEKRG-----YQRYAPK 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + H + GI ++++FF +R Sbjct: 116 SLHPKTVVVKGILADECANLMKNFFASKR 144 >gi|261855229|ref|YP_003262512.1| CMP/dCMP deaminase zinc-binding protein [Halothiobacillus neapolitanus c2] gi|261835698|gb|ACX95465.1| CMP/dCMP deaminase zinc-binding protein [Halothiobacillus neapolitanus c2] Length = 153 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 60/146 (41%), Positives = 81/146 (55%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 F+ AL+EA AA E+PVGAV V K+I+ N L D +AHAEILA+R Sbjct: 8 DRQFIQQALDEANLAAADGEVPVGAVVVRQGKVIATGRNAPIRLNDPSAHAEILALRAAG 67 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L+ L + LYVTLEPC MC AAIS ARI R+ + A +P+ G H Sbjct: 68 MALANYRLDDCTLYVTLEPCPMCMAAISHARIARVVFAAPDPRAGACGGAIDLNRAPWHH 127 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 HS + G EQ + ++++ FF+E+R Sbjct: 128 HSVVVDTGPCEQEAAELLRHFFQEKR 153 >gi|114773341|ref|ZP_01450545.1| hypothetical protein OM2255_12392 [alpha proteobacterium HTCC2255] gi|114546275|gb|EAU49186.1| hypothetical protein OM2255_12392 [alpha proteobacterium HTCC2255] Length = 150 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 83/149 (55%), Positives = 97/149 (65%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM A+ EA+ AA R E+PVGA+ +N +IIS AGNR RELKD TAHAEIL IR Sbjct: 1 MNNFTSFMPIAIIEAKKAASRGEVPVGALIEINGEIISSAGNRTRELKDPTAHAEILVIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C IL E L +LYVTLEPC MCAAAIS RI LY+GA + K GGI G + Sbjct: 61 NACSILGVERLIGANLYVTLEPCPMCAAAISNTRIANLYFGARDIKSGGINQGPCIFNHP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 HH PEIY GISE R+++ DFFK +R Sbjct: 121 QSHHKPEIYDGISELECRKLLLDFFKHKR 149 >gi|325130078|gb|EGC52865.1| tRNA-specific adenosine deaminase [Neisseria meningitidis OX99.30304] gi|325138115|gb|EGC60688.1| tRNA-specific adenosine deaminase [Neisseria meningitidis ES14902] gi|325142208|gb|EGC64629.1| tRNA-specific adenosine deaminase [Neisseria meningitidis 961-5945] Length = 163 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 57/144 (39%), Positives = 81/144 (56%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALE+A+ +AL EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 18 HFMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSE 77 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 78 MQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTH 137 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 138 TAIRGGILQEECRAVLSRFFQNKR 161 >gi|189499637|ref|YP_001959107.1| CMP/dCMP deaminase zinc-binding [Chlorobium phaeobacteroides BS1] gi|189495078|gb|ACE03626.1| CMP/dCMP deaminase zinc-binding [Chlorobium phaeobacteroides BS1] Length = 156 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 56/146 (38%), Positives = 79/146 (54%), Gaps = 1/146 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + FM A EA A + E+PVGAV N II R N+ L D TAHAE++A+ Sbjct: 4 SYFMEPAFREAIKAYEKKEVPVGAVVFDANGHIIGRGYNQVEALTDATAHAEMIALTSAM 63 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L + L + L VTLEPC MCA AI A++ R+ +GA + K G + Sbjct: 64 ATLGSKYLSDCTLAVTLEPCPMCAGAIVNAKVGRVVFGAYDAKMGACGTVMNITASRDLN 123 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H PE+Y GI E +++ ++Q+FF+ R Sbjct: 124 HQPEVYGGILEHKAQSLLQEFFRGLR 149 >gi|260592642|ref|ZP_05858100.1| tRNA-specific adenosine deaminase [Prevotella veroralis F0319] gi|260535412|gb|EEX18029.1| tRNA-specific adenosine deaminase [Prevotella veroralis F0319] Length = 150 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 84/149 (56%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +KK FM A++EA+ A EIP+GAV V ++II+RA N L DVTAHAE+ AI Sbjct: 7 IKKDMYFMQRAIDEAKAAYREGEIPIGAVVVCRDRIIARAHNLTETLNDVTAHAEMQAIT 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + L + LYVT+EPC MCA AI A++ R+ YG + K G Y Sbjct: 67 IAESELGGKYLQDCTLYVTVEPCIMCAGAIGWAQLHRIVYGCPDIKRG-----YHEYAPK 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E+ + ++Q FF+ERR Sbjct: 122 AFHPKANVTSGVLEEECKALMQRFFQERR 150 >gi|317481165|ref|ZP_07940240.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides sp. 4_1_36] gi|316902661|gb|EFV24540.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides sp. 4_1_36] Length = 146 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 80/147 (54%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL EA A R E+PVGAV V ++II+RA N L DVTAHAE+ AI Sbjct: 4 DDSYYMKQALLEAHKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAA 63 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L E LYVT+EPC MCA AI+ A++ RL +GA + K G Q Y Sbjct: 64 AATLGGKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAEDEKRG-----YQRYASQAL 118 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ GI ++++FF +R Sbjct: 119 HPKTQVVKGILADECAALMKEFFAAKR 145 >gi|168187922|ref|ZP_02622557.1| tRNA-specific adenosine deaminase [Clostridium botulinum C str. Eklund] gi|169294234|gb|EDS76367.1| tRNA-specific adenosine deaminase [Clostridium botulinum C str. Eklund] Length = 147 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 86/149 (57%), Gaps = 3/149 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKK FM AL+EA+ A ++E+PVGAV V N +II+ A N L D TAHAE+LAI+ Sbjct: 1 MKK--KFMDIALDEAKLAMEKDEVPVGAVIVRNGEIIASAHNLRETLNDPTAHAEMLAIK 58 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L L E ++YVTLEPC MCA AI +RIR++Y G +P G + Sbjct: 59 KASSVLKNWRLNECEMYVTLEPCPMCAGAIIQSRIRKIYIGTIDPCAGCCGSVLNLTENI 118 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + + ++ R +I+ +FFK +R Sbjct: 119 YLNTALGVKW-FNDNRCSEILINFFKSKR 146 >gi|326577134|gb|EGE27028.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis O35E] Length = 181 Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + M+ ALE A+ A EIPVGAV V +I+ N +D TAHAEI+A+R Sbjct: 24 RDVEMMNRALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRA 83 Query: 63 CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C L+ LP LYVTLEPCTMC A+ ARI + +GA PK G + + + A Sbjct: 84 CETLNNYRLPKGCILYVTLEPCTMCFGALIHARISHVVFGAFEPKAGVVISQLKLPEQAF 143 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +Y G+ +S ++ FF++RR Sbjct: 144 YNHRLSVYGGLLADKSSALLSGFFRQRR 171 >gi|319793607|ref|YP_004155247.1| cmp/dcmp deaminase zinc-binding protein [Variovorax paradoxus EPS] gi|315596070|gb|ADU37136.1| CMP/dCMP deaminase zinc-binding protein [Variovorax paradoxus EPS] Length = 368 Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 45/126 (35%), Positives = 71/126 (56%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V + ++I+ N D +AHAEI A+R G L L +L+VTLEPC Sbjct: 25 VPVGAVLVKDGQVIATGRNTPVAQHDPSAHAEINALRAGASALGNYRLDGCELFVTLEPC 84 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA A+ +R+ R+ +GA++PK G + + +H ++ G+ Q ++Q Sbjct: 85 AMCAGAMLHSRLARVVFGATDPKTGAAGSVLDLFAEPRLNHRTQVQGGVLAQECSAVLQG 144 Query: 144 FFKERR 149 FF++RR Sbjct: 145 FFQQRR 150 >gi|116750214|ref|YP_846901.1| zinc-binding CMP/dCMP deaminase [Syntrophobacter fumaroxidans MPOB] gi|116699278|gb|ABK18466.1| tRNA-adenosine deaminase [Syntrophobacter fumaroxidans MPOB] Length = 158 Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 56/150 (37%), Positives = 78/150 (52%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 + + FM ALEEA +E+PVGAV ++++R NR L D TAHAEIL + Sbjct: 4 LTDHDYFMGIALEEALAGREESEVPVGAVLAGPGGEVLARGHNRPIALCDPTAHAEILVL 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R LP LYVTLEPC MC A+ AR+R L +GA +PK G + + Sbjct: 64 REAAAAAGNYRLPGSVLYVTLEPCAMCVGALLQARVRTLVFGAPDPKSGAAGSVVDLTKV 123 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI ++++ FF +RR Sbjct: 124 DAFNHYVEVIGGIRMAECSELLKKFFLDRR 153 >gi|308235514|ref|ZP_07666251.1| cytidine and deoxycytidylate deaminase zinc-binding region [Gardnerella vaginalis ATCC 14018] gi|311114084|ref|YP_003985305.1| putative cytosine deaminase [Gardnerella vaginalis ATCC 14019] gi|310945578|gb|ADP38282.1| possible cytosine deaminase [Gardnerella vaginalis ATCC 14019] Length = 154 Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 52/143 (36%), Positives = 68/143 (47%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL AQ A+ E+PVGAV V II R N D +HAE+LAI+ Sbjct: 12 MQEALRLAQVASDCGEVPVGAVVVDGSGVIIGRGSNLRERDSDPLSHAEVLAIKQAAESK 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPC MCA AI I+R+ +GA + K G + P Sbjct: 72 KSWNLSDCTLVVTLEPCPMCAGAILQTHIKRVVFGAWDSKLGACGSVWDILRDPHVGSHP 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +++ + E QI+ DFFK R Sbjct: 132 QVFGSVCESECVQILSDFFKNCR 154 >gi|88801642|ref|ZP_01117170.1| putative cytosine/adenosine deaminase [Polaribacter irgensii 23-P] gi|88782300|gb|EAR13477.1| putative cytosine/adenosine deaminase [Polaribacter irgensii 23-P] Length = 149 Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 65/147 (44%), Positives = 83/147 (56%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A +EA+NA + EIPVGAV VL ++II+RA N L DVTAHAE+ A Sbjct: 6 DDIYFMKKAFQEAENAFDKGEIPVGAVIVLKDQIIARAHNLTETLNDVTAHAEMQAFTSA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L E LYVTLEPC MCA A A+I ++ YGAS P+ G +N T Sbjct: 66 ADFLGGKYLKECVLYVTLEPCQMCAGASYWAQIGKIVYGASEPERG-FKNL-----QTTL 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ GI E QI++ FF E+R Sbjct: 120 HPKTKVIGGILENECSQILKRFFIEKR 146 >gi|325921804|ref|ZP_08183621.1| tRNA-adenosine deaminase [Xanthomonas gardneri ATCC 19865] gi|325547681|gb|EGD18718.1| tRNA-adenosine deaminase [Xanthomonas gardneri ATCC 19865] Length = 165 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 77/148 (52%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNA-ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL+ A+ A +EIPVGA+ V + ++ N N D TAHAEI+A+R Sbjct: 11 DQQWMQRALQLAERAERDYDEIPVGALLVDADGNVLGEGWNFNIASHDPTAHAEIMAMRE 70 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L+ L LYVTLEPC MCA A+ ARI R+ + AS+PK G + Sbjct: 71 AGRRLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 130 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + + ++F+ +R Sbjct: 131 HNHRVQVSGGVLAAEASLRLTNYFRAKR 158 >gi|283768643|ref|ZP_06341555.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bulleidia extructa W1219] gi|283105035|gb|EFC06407.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bulleidia extructa W1219] Length = 195 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 84/148 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +MS A+EEA+ A L +E+P+G V V ++ +I+R N + HAE+ AI Sbjct: 43 NREEYYMSLAIEEAKKAELSDEVPIGCVIVCDDMVIARNHNHKESKNNAIYHAEVEAILE 102 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 ++ + L + DLYVTLEPC MC AI +R+R +YYGA + K G ++ + Sbjct: 103 ASKVKNNWNLNDCDLYVTLEPCMMCTGAILNSRLRTIYYGADSFKAGFLKTKINLEAIRG 162 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P I G+ E+ Q++ +F+++R Sbjct: 163 LNHYPVIKKGVLERECAQLLSRYFQKKR 190 >gi|163838825|ref|YP_001623230.1| tRNA-specific adenosine deaminase [Renibacterium salmoninarum ATCC 33209] gi|162952301|gb|ABY21816.1| tRNA-specific adenosine deaminase [Renibacterium salmoninarum ATCC 33209] Length = 161 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 77/149 (51%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 K +M AL EAQ A ++P+GAV + + ++ NR D TAHAE+LA+R Sbjct: 11 DKFRSWMGAALVEAQAALQTEDVPIGAVVLDASGNVVGTGRNRREADGDPTAHAEVLALR 70 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L VTLEPC MCA AI LA++ R+ +GA + K G + + Sbjct: 71 AAAEATGSWRLDGCTLVVTLEPCAMCAGAIVLAKVPRVVFGAWDAKAGAAGSVFEILREP 130 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+YPG+ E S ++++FF R Sbjct: 131 RLNHWVEVYPGVREAESAILLREFFAGHR 159 >gi|209548083|ref|YP_002280000.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533839|gb|ACI53774.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 145 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 88/142 (61%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA+ A R E+P+GAV V+++ +SR+GNR REL DVTAHAEI AIR+ C L Sbjct: 1 MEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRELNDVTAHAEIAAIRLACEGLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 QE L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGGG++NG +FY TCHH+PE Sbjct: 61 QERLVGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGGVDNGVRFYAQPTCHHAPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G +E +S +I++ FF ++R Sbjct: 121 VYSGFNEVQSAEILRTFFSQKR 142 >gi|49473908|ref|YP_031950.1| nitrogen fixation protein [Bartonella quintana str. Toulouse] gi|49239411|emb|CAF25749.1| Nitrogen fixation protein [Bartonella quintana str. Toulouse] Length = 148 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 78/142 (54%), Positives = 97/142 (68%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ A ++E+PVGAV II+R GN + D T HAE+ IRM C Sbjct: 6 MEIALLEAQWAEKKDEVPVGAVITHGQSIIARTGNYIKAAYDPTGHAEMRVIRMACETFQ 65 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E LP+ DLYVTLEPC MCAAAIS ARIRRLYY S+PKGG IE+G +FY +TCHH PE Sbjct: 66 SERLPDCDLYVTLEPCAMCAAAISFARIRRLYYAISDPKGGAIEHGPRFYQQSTCHHRPE 125 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G E+ + Q+++DFF ++R Sbjct: 126 VYSGFKEKEAAQLLKDFFAQKR 147 >gi|189347424|ref|YP_001943953.1| CMP/dCMP deaminase zinc-binding [Chlorobium limicola DSM 245] gi|189341571|gb|ACD90974.1| CMP/dCMP deaminase zinc-binding [Chlorobium limicola DSM 245] Length = 152 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 56/150 (37%), Positives = 77/150 (51%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 M N +M A EA A + E+PVGAV N I R N+ L D TAHAE++A+ Sbjct: 1 MHNLNFYMEQAFREALKAYEKKEVPVGAVVFDSNGNIAGRGHNQVEALSDATAHAEMIAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L + L L VT+EPC MCA AI A++ R+ +GA +PK G Sbjct: 61 TSAMATLGSKYLDACTLAVTMEPCPMCAGAIVNAKVGRVIFGAYDPKMGASGTVLNITGC 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ GI E + ++++DFF E R Sbjct: 121 RELNHQPEVIGGIMENKCSELLRDFFSELR 150 >gi|311897119|dbj|BAJ29527.1| putative deaminase [Kitasatospora setae KM-6054] Length = 179 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 50/143 (34%), Positives = 72/143 (50%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+EEA A ++PVGA V + ++ R N + D T HAE++AIR + Sbjct: 37 MRLAIEEAALATATGDVPVGAFVLGPDGTVLGRGHNVREAVGDPTGHAEVVAIRAAAAEV 96 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPCTMCA AI L+R+ R+ +GA +PK G + +H P Sbjct: 97 GEWRLSGCTLVVTLEPCTMCAGAIVLSRLARVVFGAYDPKAGAAGSLFDVVRDNRLNHRP 156 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + FF +R Sbjct: 157 EVIGGVLADACTAQLLAFFDTQR 179 >gi|313902768|ref|ZP_07836165.1| tRNA-adenosine deaminase [Thermaerobacter subterraneus DSM 13965] gi|313466888|gb|EFR62405.1| tRNA-adenosine deaminase [Thermaerobacter subterraneus DSM 13965] Length = 200 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 56/128 (43%), Positives = 70/128 (54%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAVAV + II+R N L D TAHAEIL +R L L V LYVTLE Sbjct: 46 GEVPVGAVAVYQDAIIARGHNLRERLGDPTAHAEILVLREAAARLGGWRLEGVTLYVTLE 105 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI LAR+ RL YGA +PK G + +H E+ G+ S ++ Sbjct: 106 PCPMCAGAIVLARVPRLVYGARDPKAGAAGSLMNLVQHDRLNHRVELRSGVLADASAALL 165 Query: 142 QDFFKERR 149 + FF+ R Sbjct: 166 RGFFRRLR 173 >gi|254479893|ref|ZP_05093141.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [marine gamma proteobacterium HTCC2148] gi|214039455|gb|EEB80114.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [marine gamma proteobacterium HTCC2148] Length = 153 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 52/147 (35%), Positives = 77/147 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL A A E+P+GAV V + +++ N KD TAHAE++A+R Sbjct: 6 EHEQWMRRALALADRAGNEGEVPIGAVIVKDGQLLGEGWNSVIAFKDPTAHAEVVAMRDA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ LP +YVTLEPCTMCA A+ AR+ L + A PK G + + Sbjct: 66 AQMTGNYRLPGSTVYVTLEPCTMCAGAMIHARVAELVFAAKEPKAGVVCSTCSLLDEPRY 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + SR+ +Q FF+ERR Sbjct: 126 NHRIRWQGGVLAEMSRERLQAFFRERR 152 >gi|126657691|ref|ZP_01728845.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Cyanothece sp. CCY0110] gi|126620908|gb|EAZ91623.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Cyanothece sp. CCY0110] Length = 163 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 72/148 (48%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL+ A+ AA ++PVGAV + I++ N D T HAEI+AIR Sbjct: 12 THRHWMKEALKLAEIAANLGDVPVGAVIINRQGNILAEGYNSKEVNHDPTGHAEIIAIRQ 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L E LYVTLEPC MCA AI +R+ L YG + K G I Sbjct: 72 ASQTLKSWHLEECTLYVTLEPCIMCAGAIIQSRLGLLVYGVDDLKSGSIRTALNLPDSVA 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E RQ ++ +F +R Sbjct: 132 SNHHLSVLSGILEAECRQQLKKWFINKR 159 >gi|332162680|ref|YP_004299257.1| tRNA-specific adenosine deaminase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325666910|gb|ADZ43554.1| tRNA-specific adenosine deaminase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860305|emb|CBX70619.1| tRNA-specific adenosine deaminase [Yersinia enterocolitica W22703] Length = 196 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A A E+PVGA+ VL+N++I NR D TAHAEI+A+R G Sbjct: 31 SDEYWMQRALALALRAQAEGEVPVGAILVLDNQVIGEGWNRPIRDNDPTAHAEIMALRQG 90 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +++ L + LYVTLEPC MCA A+ +RIRRL YGA++ K G + Sbjct: 91 GQVVQNYRLIDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLVDILRHPGM 150 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + FF+ RR Sbjct: 151 NHQIEITAGVMADVCAHQLSAFFRVRR 177 >gi|84495278|ref|ZP_00994397.1| possible cytidine and deoxycytidylate deaminase [Janibacter sp. HTCC2649] gi|84384771|gb|EAQ00651.1| possible cytidine and deoxycytidylate deaminase [Janibacter sp. HTCC2649] Length = 143 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 54/143 (37%), Positives = 71/143 (49%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+ A A ++PVGAV + +I N D TAHAE++A+R R Sbjct: 1 MRHALDLAVRAGSAGDVPVGAVVLDPGGAVIGEGWNLREVDADPTAHAEVVALRAAARHT 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPC MCA A LARI R+ GA +PK G + H Sbjct: 61 GSWRLEDCTLVVTLEPCPMCAGAAMLARISRIVLGAWDPKLGATGSVWDVVRDRRATHRI 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E + Q++ DFF ERR Sbjct: 121 EVVGGVLEAEASQLLLDFFGERR 143 >gi|226952955|ref|ZP_03823419.1| deaminase [Acinetobacter sp. ATCC 27244] gi|294650537|ref|ZP_06727894.1| cytosine deaminase [Acinetobacter haemolyticus ATCC 19194] gi|226836276|gb|EEH68659.1| deaminase [Acinetobacter sp. ATCC 27244] gi|292823534|gb|EFF82380.1| cytosine deaminase [Acinetobacter haemolyticus ATCC 19194] Length = 174 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 79/148 (53%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A E+A AA + EIPVGAV V +KII N L D +AHAEI A+RM Sbjct: 12 DDEYWMQFAYEQAALAAEQGEIPVGAVIVSQSKIIGAGYNAPILLSDPSAHAEIQALRMA 71 Query: 63 CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C+ + LP + LYVTLEPCTMC A+ ARI+R+ + PK G + + Q Sbjct: 72 CQSIQNYRLPEDATLYVTLEPCTMCVGALIHARIQRVVFATPEPKAGSLVSARQLLDSGY 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G + + + DFFK+RR Sbjct: 132 YNHKFVFEHGCMQAKCSAQLSDFFKQRR 159 >gi|238650838|ref|YP_002916693.1| tRNA-specific adenosine deaminase [Rickettsia peacockii str. Rustic] gi|238624936|gb|ACR47642.1| tRNA-specific adenosine deaminase [Rickettsia peacockii str. Rustic] Length = 168 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 67/148 (45%), Positives = 97/148 (65%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL++A+ A +NE+PVGAV V N KII+ N E + HAEI+AI Sbjct: 12 NNFFMEQALKQAKIAFDKNEVPVGAVVVDRLNQKIIASTHNNTEEKNNALYHAEIIAINK 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+ +++ + Sbjct: 72 ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSSA 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C H PEIY GI + S ++++FFK R Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159 >gi|34581121|ref|ZP_00142601.1| cytosine deaminase [Rickettsia sibirica 246] gi|229587195|ref|YP_002845696.1| Cytosine deaminase [Rickettsia africae ESF-5] gi|28262506|gb|EAA26010.1| cytosine deaminase [Rickettsia sibirica 246] gi|228022245|gb|ACP53953.1| Cytosine deaminase [Rickettsia africae ESF-5] Length = 168 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 67/148 (45%), Positives = 97/148 (65%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL++A+ A +NE+PVGAV V N KII+ N E + HAEI+AI Sbjct: 12 NNFFMEQALKQAKIAFDKNEVPVGAVVVDRLNQKIIASTHNNTEEKNNALYHAEIIAINE 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+ +++ + Sbjct: 72 ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSSA 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C H PEIY GI + S ++++FFK R Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159 >gi|157829120|ref|YP_001495362.1| cytosine deaminase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933844|ref|YP_001650633.1| tRNA-specific adenosine deaminase [Rickettsia rickettsii str. Iowa] gi|157801601|gb|ABV76854.1| cytosine deaminase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908931|gb|ABY73227.1| tRNA-specific adenosine deaminase [Rickettsia rickettsii str. Iowa] Length = 168 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 68/148 (45%), Positives = 97/148 (65%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL++A+ A +NE+PVGAV V N KII+ N E + HAEI+AI Sbjct: 12 NNFFMEQALKQAKIAFDKNEVPVGAVVVDRLNQKIIASTHNNTEEKNNALYHAEIIAINE 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G IE+ +++ + Sbjct: 72 ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAIESNLRYFNSSA 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C H PEIY GI + S ++++FFK R Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159 >gi|315223581|ref|ZP_07865436.1| tRNA-specific adenosine deaminase [Capnocytophaga ochracea F0287] gi|314946497|gb|EFS98491.1| tRNA-specific adenosine deaminase [Capnocytophaga ochracea F0287] Length = 158 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM ALEEAQ A +EIPVGA+ ++N+II++A N L DVTAHAE+ AI Sbjct: 15 MNTDEYFMQKALEEAQLAFEEDEIPVGAIITIDNRIIAKAHNLTERLNDVTAHAEMQAIT 74 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M L + L +Y+TLEPC MCA A+ +++ RL Y A + G G Sbjct: 75 MAAHYLGGKYLTGCTMYLTLEPCAMCAGALYWSQLSRLVYAAPDTHRGYSVMG------G 128 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI Q + +++ FF+++R Sbjct: 129 KLHPKTEVVTGILSQEATALLKQFFQQKR 157 >gi|167648591|ref|YP_001686254.1| CMP/dCMP deaminase zinc-binding [Caulobacter sp. K31] gi|167351021|gb|ABZ73756.1| CMP/dCMP deaminase zinc-binding [Caulobacter sp. K31] Length = 146 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 67/144 (46%), Positives = 90/144 (62%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+EA+ AA E PVGAV + +I++RAGN D TAHAEI AIR+ Sbjct: 1 MAVALDEARAAAQAGETPVGAVILDPASGEILARAGNGPIGAHDPTAHAEISAIRLAAAK 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L ++ L VTLEPC MCA AIS ARI R+ +GA +PKGG + +G +F+ TCH Sbjct: 61 LGNYRLTDLTLVVTLEPCAMCAGAISHARIGRVVFGAEDPKGGAVVHGPRFFAQPTCHWR 120 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+ G+ Q S +++ FF+ RR Sbjct: 121 PEVTGGVMAQESADLLRGFFRARR 144 >gi|241895205|ref|ZP_04782501.1| tRNA-adenosine deaminase [Weissella paramesenteroides ATCC 33313] gi|241871511|gb|EER75262.1| tRNA-adenosine deaminase [Weissella paramesenteroides ATCC 33313] Length = 175 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 55/145 (37%), Positives = 83/145 (57%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL EA+ AA+ E+P+GAV V + +++SRA N ++D + HAE AI R Sbjct: 11 DYFMGLALAEARKAAMIGEVPIGAVVVQDGQVVSRAFNLREHMQDGSQHAEYQAIIEANR 70 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L LP+ L+VTLEPC MCA I R+ +YYGA +PK GG+ + + T +H Sbjct: 71 QLHSWRLPDAQLFVTLEPCIMCAGLIQQTRLTDVYYGADDPKAGGVTSMYELLTDERLNH 130 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + +++ FFK R Sbjct: 131 QVNVHAGVRADEASSLLKQFFKAVR 155 >gi|121998459|ref|YP_001003246.1| CMP/dCMP deaminase, zinc-binding [Halorhodospira halophila SL1] gi|121589864|gb|ABM62444.1| CMP/dCMP deaminase, zinc-binding protein [Halorhodospira halophila SL1] Length = 142 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 58/142 (40%), Positives = 82/142 (57%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M+ ALE A+ AA + E+PVGAV V + ++ N+ +D TAHAEI A+R + Sbjct: 1 MARALELARYAADQGEVPVGAVVVRDGVLLGEGRNQPIVSRDPTAHAEINALRAAGQAAG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 LP LYVTLEPC MCA A+ ARI RL YGA++PK G L +H E Sbjct: 61 AYRLPGATLYVTLEPCFMCAGALIHARIERLVYGAADPKTGACGGQFDLLGLPGHNHRVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+S + + ++++FF+ RR Sbjct: 121 VTAGVSGEAAAGLLREFFRARR 142 >gi|319405143|emb|CBI78749.1| Cytosine/adenosine deaminase [Bartonella sp. AR 15-3] Length = 150 Score = 198 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 76/142 (53%), Positives = 100/142 (70%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ+A ++E+PVGAV II+RAGN ++ D T HAE+ IR+ C+I Sbjct: 6 MEIALLEAQSAKKQDEVPVGAVITHGQTIIARAGNYTKKSHDPTGHAEMRVIRIACQIFK 65 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E +PE DLYVTLEPCTMCAAAIS ARIR LYY + KGG IE+G++FY +TCHH P Sbjct: 66 SERIPECDLYVTLEPCTMCAAAISFARIRNLYYATKDSKGGAIEHGSRFYQQSTCHHKPN 125 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G E+ + Q+++DFF ++R Sbjct: 126 VYSGFKEKEASQLLKDFFIQKR 147 >gi|86738996|ref|YP_479396.1| tRNA-adenosine deaminase [Frankia sp. CcI3] gi|86565858|gb|ABD09667.1| tRNA-adenosine deaminase [Frankia sp. CcI3] Length = 176 Score = 198 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 54/143 (37%), Positives = 74/143 (51%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA+ A ++PVGA+ V + ++ N D TAHAE++A+R R Sbjct: 29 MGLALREARLAPDHADVPVGALVVTEDGTVLGLGHNERERGADPTAHAEMIALRAAARRT 88 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP L VTLEPCTMCA A+ LAR+ RL YGA + K G + + +H P Sbjct: 89 GSWRLPGATLVVTLEPCTMCAGALVLARVDRLVYGAVDEKAGAVGSLWDVVRDRRLNHRP 148 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI ++ +FF RR Sbjct: 149 EVVAGIRADECGALLAEFFAARR 171 >gi|284028320|ref|YP_003378251.1| CMP/dCMP deaminase zinc-binding protein [Kribbella flavida DSM 17836] gi|283807613|gb|ADB29452.1| CMP/dCMP deaminase zinc-binding protein [Kribbella flavida DSM 17836] Length = 144 Score = 198 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 54/143 (37%), Positives = 76/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA++A ++P+GAV V ++I R N D TAHAE+LAIR R + Sbjct: 1 MELALAEAEHARGSADVPIGAVVVDAGGEVIGRGHNEREATGDPTAHAEVLAIRAAARHV 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPCTMCA AI L+R+ RL + A + K G + + +H P Sbjct: 61 GEWRLTGCTLVVTLEPCTMCAGAIVLSRLDRLVFAAYDEKAGAVGSLWDVVRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + ++DFF R Sbjct: 121 EVVGGVLADEAGARLRDFFIGHR 143 >gi|283457271|ref|YP_003361841.1| cytosine/adenosine deaminase [Rothia mucilaginosa DY-18] gi|283133256|dbj|BAI64021.1| cytosine/adenosine deaminase [Rothia mucilaginosa DY-18] Length = 175 Score = 198 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 74/149 (49%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 + + +M+ AL E A R EIP+GAV V II AGN + D +AHAE+ AIR Sbjct: 26 SEHSEWMAHALVEGAAAGERGEIPIGAVVVDEQGVIIGSAGNTREQEHDPSAHAEVNAIR 85 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 Q L L VT+EPC MCA I +R+ + +GA K G + Sbjct: 86 QAAACRGQWRLDGCTLVVTVEPCLMCAGTILASRVSTVVFGAWEEKTGAAGSRYDVLRDG 145 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +PE+Y G+ Q++ DFFKERR Sbjct: 146 RVAPAPEVYAGVRADECAQLMVDFFKERR 174 >gi|255527107|ref|ZP_05393995.1| CMP/dCMP deaminase zinc-binding [Clostridium carboxidivorans P7] gi|296187896|ref|ZP_06856289.1| cytidine and deoxycytidylate deaminase zinc-binding region [Clostridium carboxidivorans P7] gi|255509209|gb|EET85561.1| CMP/dCMP deaminase zinc-binding [Clostridium carboxidivorans P7] gi|296047517|gb|EFG86958.1| cytidine and deoxycytidylate deaminase zinc-binding region [Clostridium carboxidivorans P7] Length = 145 Score = 198 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 4/149 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK FM A++EA+ + + E+PVG V V +N II+RA N L+D AHAEILAI+ Sbjct: 1 MKN---FMREAIKEAEKSLVLGEVPVGVVIVKDNIIIARAHNLRETLQDTLAHAEILAIK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L +YVTLEPC MCA AI +RI +Y G P G + Sbjct: 58 EASQYTNNWRLSGCSMYVTLEPCPMCAGAILQSRISNVYIGTFEPNTGACGSVINILQND 117 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +Y +++ I+++FF ++R Sbjct: 118 NLNRWTNVYWNY-DEKCSNILEEFFSKKR 145 >gi|218258211|ref|ZP_03474613.1| hypothetical protein PRABACTJOHN_00267 [Parabacteroides johnsonii DSM 18315] gi|218225660|gb|EEC98310.1| hypothetical protein PRABACTJOHN_00267 [Parabacteroides johnsonii DSM 18315] Length = 147 Score = 198 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 83/147 (56%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL EA+ AA E+PVGAV V NN+II+RA N+ L D TAHAE+LAI Sbjct: 6 NDEYFMKQALIEARAAAKEGEVPVGAVIVCNNRIIARAHNQTERLNDPTAHAEMLAITAA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L + L LYVT+EPC MCA AI +++ ++ YGA++ K G Q Y Sbjct: 66 VGVLGAKYLTGCSLYVTVEPCVMCAGAIGWSQLSKIVYGATDEKRG-----FQQYAPKAL 120 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E + +++FF+ +R Sbjct: 121 HPKSTVKKGVLENECAEEMRNFFQRKR 147 >gi|58698581|ref|ZP_00373480.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58534906|gb|EAL59006.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia endosymbiont of Drosophila ananassae] Length = 148 Score = 198 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 72/144 (50%), Positives = 93/144 (64%), Gaps = 8/144 (5%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+E+A+ A +E+P+GAV V + IIS A N D TAHAE+LAIR Sbjct: 12 QYMELAIEQAKLAQKNDEVPIGAVIVSGDNIISSAHN---ISSDPTAHAEMLAIRQA--- 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 S L + D+YVTLEPC MCA AIS ARI+RLY+GA NPKGGGIENG + + C H Sbjct: 66 FSTSTLCDTDMYVTLEPCPMCAQAISFARIKRLYFGAYNPKGGGIENGAKIFQF--CSHI 123 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+Y GI E +++DFF++ R Sbjct: 124 PEVYGGILETECSFLLKDFFEKLR 147 >gi|329957514|ref|ZP_08297989.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides clarus YIT 12056] gi|328522391|gb|EGF49500.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides clarus YIT 12056] Length = 144 Score = 198 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 78/147 (53%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL EAQ A R E+PVGAV V ++II+RA N L DVTAHAE+ AI Sbjct: 2 TDTDYMKQALLEAQKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L E LYVT+EPC MCA AI+ A+ RL +GA + K G Q Y Sbjct: 62 AATLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGRLVFGAEDEKRG-----YQRYAPQAL 116 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ +++DFF +R Sbjct: 117 HPKTSVVKGVLADECAALMKDFFAAKR 143 >gi|190574881|ref|YP_001972726.1| putative cytidine and deoxycytidylate deaminase [Stenotrophomonas maltophilia K279a] gi|190012803|emb|CAQ46432.1| putative cytidine and deoxycytidylate deaminase [Stenotrophomonas maltophilia K279a] Length = 174 Score = 198 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL A+ A +EIPVGAV V + +++ N N D +AHAEI+A+R Sbjct: 13 DEHWMRHALALAERAQREFDEIPVGAVLVGADGQLLGEGWNLNIASHDPSAHAEIVAMRA 72 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G ++L+ L LYVTLEPC MCA AI AR+ RL YGAS+PK G + A Sbjct: 73 GGKLLANHRLLGSTLYVTLEPCAMCAMAIVHARVSRLVYGASDPKTGACGSVFDLLGDAR 132 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI+ G+ + + + ++F+ +R Sbjct: 133 HNHRVEIHGGVLAKEASTRLTNYFRAKR 160 >gi|114046813|ref|YP_737363.1| tRNA-adenosine deaminase [Shewanella sp. MR-7] gi|113888255|gb|ABI42306.1| tRNA-adenosine deaminase [Shewanella sp. MR-7] Length = 222 Score = 198 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 49/146 (33%), Positives = 69/146 (47%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A+ A+ A E+PVGAV V + I+ N + D AHAEI +R Sbjct: 59 DEHWMRVAMAMAEKAEAAGEVPVGAVLVKEGQQIAAGYNLSISEHDPCAHAEIQCLRAAG 118 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + + L + LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 119 QTIENYRLLDTTLYVTLEPCAMCAGAMVHSRIARVVFGAKDEKTGAAGTVLNLLQHPAFN 178 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ Q + FFK RR Sbjct: 179 HQVEVASGVLAQDCADQLSRFFKRRR 204 >gi|86132518|ref|ZP_01051112.1| cytidine/deoxycytidylate deaminase family protein [Dokdonia donghaensis MED134] gi|85817079|gb|EAQ38263.1| cytidine/deoxycytidylate deaminase family protein [Dokdonia donghaensis MED134] Length = 149 Score = 198 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 63/147 (42%), Positives = 85/147 (57%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL+EAQ A + EIPVGAV V++N II+RA N L DVTAHAE+ AI Sbjct: 6 DDTYFMKKALQEAQAAFDQGEIPVGAVVVIDNMIIARAHNLTERLTDVTAHAEMQAITSA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L + LYVTLEPC MCA A+ ++I R+ YGAS+ + G + GT T Sbjct: 66 SNYIGGKYLQQCTLYVTLEPCQMCAGALYWSQIGRIVYGASDERRGYEKMGT------TL 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ GI QI++ FF ++R Sbjct: 120 HPKTKVERGILAHECEQIMKRFFIDKR 146 >gi|284928847|ref|YP_003421369.1| tRNA-adenosine deaminase [cyanobacterium UCYN-A] gi|284809306|gb|ADB95011.1| tRNA-adenosine deaminase [cyanobacterium UCYN-A] Length = 162 Score = 198 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 78/149 (52%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 K + +M AL AQ A ++PVGAV V N +I++ N + D T HAEI+AIR Sbjct: 6 KIHHQWMKKALSLAQKAENLEDVPVGAVIVDNYGNLIAQGHNCKKRNNDPTGHAEIVAIR 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L + LYVTLEPC MC AI +RI L YG +PK G I Sbjct: 66 QASQKLQSCYLEKCVLYVTLEPCIMCTGAIIHSRIGLLVYGIDDPKTGAIRTVLNLPDSN 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI +Q +Q +Q++FK+ R Sbjct: 126 ASNHRLPVISGILKQDCQQHLQEWFKKIR 154 >gi|312131614|ref|YP_003998954.1| cmp/dcmp deaminase zinc-binding protein [Leadbetterella byssophila DSM 17132] gi|311908160|gb|ADQ18601.1| CMP/dCMP deaminase zinc-binding protein [Leadbetterella byssophila DSM 17132] Length = 153 Score = 198 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 6/148 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRM 61 FM AL A+ A + EIPVGA+ V + K II + N+ +L DVTAHAEILA+ Sbjct: 10 SHEYFMQKALTLAEEAFDQGEIPVGALVVADGKTIIGKGYNQTEKLTDVTAHAEILALSA 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L + L + LYVTLEPC MCA A++ +++ R+ + AS+ K G + + Sbjct: 70 ASQYLGAKYLKDCTLYVTLEPCMMCAGALAWSQVSRIVFAASDEKRG-----FSLWEPSV 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ + +++ FF+ R Sbjct: 125 LHPKTEVIKGVLANEAGALLKAFFRRLR 152 >gi|254521455|ref|ZP_05133510.1| tRNA-specific adenosine deaminase [Stenotrophomonas sp. SKA14] gi|219719046|gb|EED37571.1| tRNA-specific adenosine deaminase [Stenotrophomonas sp. SKA14] Length = 174 Score = 198 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 84/148 (56%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL A+ A +EIPVGAV V + +++ N N D +AHAEI+A+R+ Sbjct: 13 DEHWMRHALALAERAQREFDEIPVGAVLVGADGQLLGEGWNLNIASHDPSAHAEIVAMRV 72 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G ++LS L LYVTLEPC MCA AI AR+ RL YGAS+PK G + A Sbjct: 73 GGKVLSNHRLLGSTLYVTLEPCAMCAMAIVHARVSRLVYGASDPKTGACGSVFDLLGDAR 132 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI+ G+ + + + ++F+ +R Sbjct: 133 HNHRVEIHGGVLAKEASTRLTNYFRAKR 160 >gi|157804219|ref|YP_001492768.1| cytosine deaminase [Rickettsia canadensis str. McKiel] gi|157785482|gb|ABV73983.1| cytosine deaminase [Rickettsia canadensis str. McKiel] Length = 200 Score = 198 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 68/148 (45%), Positives = 98/148 (66%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL++A+ A +NE+PVGAV V N KII+ + N E + HAEI+ I Sbjct: 12 NNFFMQQALKQARIAFDKNEVPVGAVIVDRLNQKIIASSYNNTEEKNNALYHAEIITINE 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C I+S + L + D+YVTLEPC MCAAAIS +R++RL+YG S+PK G +E+ +++ + Sbjct: 72 ACNIISCKNLNDYDIYVTLEPCAMCAAAISHSRLKRLFYGVSDPKHGAVESNLRYFNSSA 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C H PEIY GI + S ++++FFK+ R Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKKIR 159 >gi|290969052|ref|ZP_06560587.1| cytidine and deoxycytidylate deaminase zinc-binding region [Megasphaera genomosp. type_1 str. 28L] gi|290781008|gb|EFD93601.1| cytidine and deoxycytidylate deaminase zinc-binding region [Megasphaera genomosp. type_1 str. 28L] Length = 157 Score = 198 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 56/139 (40%), Positives = 70/139 (50%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M ++M AL EA+ A EIP+GAV V N II+RA N L TAHAE+LAI Sbjct: 1 MTLDELYMGKALAEAETAFAVEEIPIGAVIVHENTIIARAYNLRETLPCATAHAELLAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR L++ L LYVT EPC MCA AI +R+ RL YG +PK G + Sbjct: 61 KACRHLNRWRLSGCTLYVTTEPCPMCAGAIVNSRLDRLVYGCPDPKAGAVHTLFHLTDHP 120 Query: 121 TCHHSPEIYPGISEQRSRQ 139 +H + GI Sbjct: 121 RLNHRVAVTAGIRADECAD 139 >gi|163782336|ref|ZP_02177334.1| hypothetical protein HG1285_06100 [Hydrogenivirga sp. 128-5-R1-1] gi|159882369|gb|EDP75875.1| hypothetical protein HG1285_06100 [Hydrogenivirga sp. 128-5-R1-1] Length = 147 Score = 198 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 57/146 (39%), Positives = 85/146 (58%), Gaps = 3/146 (2%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 VF+ AL+EA+ A E+PVG V V +++RA NR ELKD +AHAE+LA+R + Sbjct: 3 EVFLKEALKEAERAYALGEVPVGCVVVKGGNVLARAHNRTEELKDASAHAELLALREAAK 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 +L L +LYVTLEPC MCA A+ L R+ R+ +G + K GG+ + +H Sbjct: 63 VLGDWRLEGCELYVTLEPCVMCAYALILFRVDRVVFGTPDRKHGGVMSLYSLLDDERFNH 122 Query: 125 SP-EIYPGISEQRSRQIIQDFFKERR 149 +Y + +++++FFKERR Sbjct: 123 RVKWVYEPC--EECGRLLREFFKERR 146 >gi|119356459|ref|YP_911103.1| tRNA-adenosine deaminase [Chlorobium phaeobacteroides DSM 266] gi|119353808|gb|ABL64679.1| tRNA-adenosine deaminase [Chlorobium phaeobacteroides DSM 266] Length = 153 Score = 198 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 56/145 (38%), Positives = 84/145 (57%), Gaps = 1/145 (0%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M+ A +EA A + E+PVGAV N I+ + N+ EL D TAHAE++A+ Sbjct: 5 HYMAIAFKEALKAVEKKEVPVGAVVFDSNGNIVGKGYNQVEELSDATAHAEMIALTSAMA 64 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L+ + L + + VT+EPC MCA A+ A+I RL +GA +PK G +H Sbjct: 65 TLNTKYLDDCTIAVTMEPCPMCAGALVNAKIGRLIFGAYDPKMGAAGTVLNITGCRELNH 124 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 +PE++ GI EQ+ ++QDFF+E R Sbjct: 125 NPEVFGGIMEQQCSGLLQDFFRELR 149 >gi|163786614|ref|ZP_02181062.1| putative cytosine/adenosine deaminase [Flavobacteriales bacterium ALC-1] gi|159878474|gb|EDP72530.1| putative cytosine/adenosine deaminase [Flavobacteriales bacterium ALC-1] Length = 149 Score = 198 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 85/147 (57%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL+EA+ A + EIPVGA+ V+ ++II+R N L DVTAHAE+ AI Sbjct: 6 DDTYFMRKALQEAEVAFEKGEIPVGAIIVVKDRIIARTHNLTELLNDVTAHAEMQAITSA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L + LYVTLEPC MCA A+ ++I ++ YGAS+ + G GT+ Sbjct: 66 ANFLGGKYLIDCTLYVTLEPCQMCAGALYWSQISKIVYGASDEQRGFETMGTKL------ 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ GI + + ++++ FF E+R Sbjct: 120 HPKTKVVSGILAEEASELMKRFFIEKR 146 >gi|301058427|ref|ZP_07199448.1| cytidine and deoxycytidylate deaminase zinc-binding region [delta proteobacterium NaphS2] gi|300447483|gb|EFK11227.1| cytidine and deoxycytidylate deaminase zinc-binding region [delta proteobacterium NaphS2] Length = 159 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 56/143 (39%), Positives = 76/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL EA+ A + E+PVGAV I+SRA N+ L D TAHAEILAIR C I Sbjct: 2 MAQALLEAKKAYSKGEVPVGAVLADAQGYILSRAHNQPISLCDPTAHAEILAIRKACSIC 61 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L T+EPC MC A +R+ + +GA + KGG + +H Sbjct: 62 GNYRLTRCLLVATIEPCIMCMGAAIHSRVSTVIFGAHDVKGGAAGSLYDLSRDYRLNHRM 121 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI G+ E R++++ FF+ RR Sbjct: 122 EIVSGVREDECRELMRAFFRARR 144 >gi|84515288|ref|ZP_01002650.1| hypothetical protein SKA53_01481 [Loktanella vestfoldensis SKA53] gi|84510571|gb|EAQ07026.1| hypothetical protein SKA53_01481 [Loktanella vestfoldensis SKA53] Length = 148 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 81/142 (57%), Positives = 99/142 (69%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EA+ AA R E+PVGAV + II++AGNR REL D TAHAE+LAIR C L Sbjct: 7 MDIALTEARAAAARGEVPVGAVITQDGAIIAQAGNRTRELNDPTAHAEMLAIRAACAALG 66 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 QE L DLYVTLEPC MCAAAIS ARI RLYY A++PK GG+ G + +T CHH P+ Sbjct: 67 QERLTGCDLYVTLEPCPMCAAAISNARIARLYYAAADPKSGGVAQGPRIFTHPQCHHRPD 126 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y GIS + Q+++DFF +R Sbjct: 127 VYDGISATAAEQLLRDFFAAKR 148 >gi|167765018|ref|ZP_02437139.1| hypothetical protein BACSTE_03412 [Bacteroides stercoris ATCC 43183] gi|167697687|gb|EDS14266.1| hypothetical protein BACSTE_03412 [Bacteroides stercoris ATCC 43183] Length = 144 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 79/147 (53%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL EAQ A R E+PVGAV V ++II+RA N L DVTAHAE+ AI Sbjct: 2 TDTDYMKQALLEAQKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L E LYVT+EPC MCA AI+ A++ RL +GA + K G Q Y Sbjct: 62 AATLGGKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAEDEKRG-----YQRYAPKAL 116 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ +++DFF +R Sbjct: 117 HPKTAVVKGVLADECAALMKDFFAAKR 143 >gi|291459912|ref|ZP_06599302.1| cytidine/deoxycytidylate deaminase family protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291417253|gb|EFE90972.1| cytidine/deoxycytidylate deaminase family protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 179 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 54/164 (32%), Positives = 75/164 (45%), Gaps = 19/164 (11%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNN-------------------KIISRAGNRNR 45 M A+ EA+ A ++P+G + V + +II R NR Sbjct: 9 EELMRLAIREAKKAERNGDVPIGCLIVYDGRLPGSRADQRAEEQSIRPGEIIGRGYNRRN 68 Query: 46 ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 K HAEI AI CR L L + + VTLEPC MCA AI ARI RL +GA NP Sbjct: 69 RDKSALKHAEISAISKACRRLGDWRLEDCTMIVTLEPCPMCAGAILQARIPRLLFGAENP 128 Query: 106 KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 K G + L+ +H E+ P + + ++++ DFF R Sbjct: 129 KAGFCGSVLDILQLSALNHRVELLPPVLREDCKRLMTDFFGRLR 172 >gi|282883358|ref|ZP_06291951.1| tRNA-specific adenosine deaminase [Peptoniphilus lacrimalis 315-B] gi|281296769|gb|EFA89272.1| tRNA-specific adenosine deaminase [Peptoniphilus lacrimalis 315-B] Length = 157 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 53/144 (36%), Positives = 81/144 (56%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALE A+ + ++PVG V V + KII + N+ + K+ HAEI AI C+ Sbjct: 10 YFMKKALELAKISYENFDVPVGCVIVKDKKIIGKGYNQKEKNKNPLCHAEINAINSACKN 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L+ L + D+YVTLEPC MC AI ARI+ LY+GA N + G + + + +H Sbjct: 70 LNSYHLEDCDMYVTLEPCLMCVGAIINARIKNLYFGAYNYRFGAVLSHVELLKDGGFNHK 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI ++ S +++ FF++ R Sbjct: 130 TKYQGGILKEESARLLNSFFEKLR 153 >gi|167748009|ref|ZP_02420136.1| hypothetical protein ANACAC_02746 [Anaerostipes caccae DSM 14662] gi|167652586|gb|EDR96715.1| hypothetical protein ANACAC_02746 [Anaerostipes caccae DSM 14662] Length = 152 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM A+++A+ AA ++P+G V VL+ KII+RA N+ + K AHAE+LAI Sbjct: 1 MNENEKFMKEAIKQAKKAAAIGDVPIGCVIVLDGKIIARAYNQRNKRKTTLAHAELLAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L E +Y+TLEPC MCA AI ARI ++ GA NPK G + Sbjct: 61 KASKKTGDWRLEECTMYITLEPCQMCAGAIVQARIPKVVIGAMNPKAGCAGSILNILQRE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + ++ DFF++ R Sbjct: 121 EFNHQAEIESGVLREECSHMMSDFFRQLR 149 >gi|11068000|gb|AAG28837.1| cytosine deaminase [Bifidobacterium longum] Length = 143 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 55/143 (38%), Positives = 74/143 (51%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M CALE A AA ++PVGAV + +I+ R N D AHAEI+A+R + L Sbjct: 1 MRCALELAGQAAAAGDVPVGAVVLDAAGQIVGRGYNTREADGDPLAHAEIIAMRQAAQAL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPC MCA A I + +GA +PK G + HSP Sbjct: 61 GAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRDPHIGHSP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E++ G+ E + I+ DFF +RR Sbjct: 121 EVHGGVLEGECQSILTDFFAQRR 143 >gi|296113086|ref|YP_003627024.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis RH4] gi|295920780|gb|ADG61131.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis RH4] Length = 159 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + M+ ALE A+ A EIPVGAV V +I+ N +D TAHAEI+A+R Sbjct: 2 RDVEMMNRALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRA 61 Query: 63 CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C L+ LP LYVTLEPCTMC A+ ARI R+ +GA PK G + + + Sbjct: 62 CETLNNYRLPKGCILYVTLEPCTMCFGALIHARISRVVFGAFEPKAGVVVSQLKLPEQVF 121 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +Y G+ +S ++ FF++RR Sbjct: 122 YNHHLSVYGGLLADKSSALLSGFFRQRR 149 >gi|313200758|ref|YP_004039416.1| cmp/dcmp deaminase zinc-binding protein [Methylovorus sp. MP688] gi|312440074|gb|ADQ84180.1| CMP/dCMP deaminase zinc-binding protein [Methylovorus sp. MP688] Length = 175 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 61/146 (41%), Positives = 75/146 (51%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL+ AQ AA E+PVGA+ VL+ II R N D TAHAEI A+R Sbjct: 16 DQAFMQQALQLAQAAADAGEVPVGALVVLDGAIIGRGMNAPIGRHDPTAHAEIQAMREAA 75 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L LYVTLEPC MC+ AI ARI RL YGA +PK G + + Sbjct: 76 SAIGNYRLVGCTLYVTLEPCAMCSGAIQHARIARLVYGARDPKTGSCGSVIDLMAEPRLN 135 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI + S ++ FF RR Sbjct: 136 HHTEVAGGILAEESGSMLSRFFSARR 161 >gi|213962212|ref|ZP_03390476.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga sputigena Capno] gi|213955218|gb|EEB66536.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga sputigena Capno] Length = 144 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 85/149 (57%), Gaps = 6/149 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM ALEEAQ A +EIPVGA+ ++N+II++A N LKDVTAHAE+ AI Sbjct: 1 MNTDEYFMQKALEEAQIAFEEDEIPVGAIITIDNRIIAKAHNLTERLKDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M L + L + +Y+TLEPC MCA A+ +++ RL Y A +P G G Sbjct: 61 MAAHYLGGKYLTDCTMYITLEPCAMCAGALYWSQLSRLVYAADDPHRGFKAMG------G 114 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI + + +++ FF+++R Sbjct: 115 KLHPKTEVVMGILSEEATTLLKQFFQQKR 143 >gi|255534103|ref|YP_003094475.1| zinc-binding CMP/dCMP deaminase [Pedobacter heparinus DSM 2366] gi|255347087|gb|ACU06413.1| CMP/dCMP deaminase zinc-binding [Pedobacter heparinus DSM 2366] Length = 157 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 74/147 (50%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM AL+EAQ A EIP+GA+ V KI+ R N +L DVTAHAE+ A Sbjct: 15 EDEHFMRLALQEAQKAYDLKEIPIGAIVVCKGKIVGRGHNLTEQLNDVTAHAEMQAFTAA 74 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L + L + LYVT+EPC MCA A +I +L YGA PK G Q Sbjct: 75 SQTLGGKYLKDCTLYVTIEPCVMCAGASYWTQIGKLVYGAPEPKRGFTTKSNQL-----L 129 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ Q ++ FF ++R Sbjct: 130 HPKTVLKSGVLAQECGALMTKFFADKR 156 >gi|291455623|ref|ZP_06595013.1| cytidine and deoxycytidylate deaminase family protein [Bifidobacterium breve DSM 20213] gi|291382551|gb|EFE90069.1| cytidine and deoxycytidylate deaminase family protein [Bifidobacterium breve DSM 20213] Length = 152 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 54/150 (36%), Positives = 75/150 (50%), Gaps = 2/150 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 M + M ALE A+ AA ++PVGAV V + +II R N D AHAEI+A+ Sbjct: 4 MGYDEM-MHGALELAKRAAAAGDVPVGAVVVDADGQIIGRGYNTREADGDPLAHAEIIAM 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R R L L + L VTLEPC MCA A I + +GA + K G + Sbjct: 63 REAARALGSWNLSDCTLAVTLEPCPMCAGACVQTHIGTIVFGAWDSKLGACGSIWDIPRD 122 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H+PE++ G++E + ++ FF RR Sbjct: 123 PHIGHAPEVHGGVAEADCQTLLSTFFAHRR 152 >gi|317473697|ref|ZP_07932984.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Anaerostipes sp. 3_2_56FAA] gi|316898818|gb|EFV20845.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Anaerostipes sp. 3_2_56FAA] Length = 152 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM A+++A+ AA ++P+G V VL+ KII+RA N+ + K AHAE+LAI Sbjct: 1 MNENEKFMKEAIKQAKKAAAIGDVPIGCVIVLDGKIIARAYNQRNKRKTTLAHAELLAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L E +Y+TLEPC MCA AI ARI ++ GA NPK G + Sbjct: 61 KASKKTGDWRLEECTMYITLEPCQMCAGAIVQARIPKVVIGAMNPKAGCAGSILNILQRE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + ++ DFF+E R Sbjct: 121 EFNHQAEIESGVLREECSHMMSDFFRELR 149 >gi|121602446|ref|YP_989463.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Bartonella bacilliformis KC583] gi|120614623|gb|ABM45224.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Bartonella bacilliformis KC583] Length = 148 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 77/142 (54%), Positives = 96/142 (67%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ AA + E+PVGAV IISRAGN ++ D T HAEI IRM C L Sbjct: 6 MEIALLEAQLAAEKGEVPVGAVITRGKTIISRAGNSIKKPYDPTGHAEIRVIRMACETLK 65 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E LP+ +LYVTLEPC MCAAAIS RI+ LYY AS+ KGG IE+G + Y TCHH P+ Sbjct: 66 SERLPDCNLYVTLEPCAMCAAAISFTRIQHLYYAASDSKGGAIEHGPRLYQQPTCHHRPD 125 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G E+ + Q+++DFF ++R Sbjct: 126 VYSGFKEREAIQLLKDFFAQKR 147 >gi|319787039|ref|YP_004146514.1| CMP/dCMP deaminase zinc-binding protein [Pseudoxanthomonas suwonensis 11-1] gi|317465551|gb|ADV27283.1| CMP/dCMP deaminase zinc-binding protein [Pseudoxanthomonas suwonensis 11-1] Length = 366 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 80/148 (54%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M AL+ A+ A +EIPVGAV V ++I NRN D +AHAEI+A+R Sbjct: 214 DERHMCHALDLAERAEKEFDEIPVGAVVVSAAGEVIGEGWNRNILDHDPSAHAEIMAMRQ 273 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + LS L LYVTLEPC MCA A+ ARI R+ YGA++PK G + Sbjct: 274 AGQALSNHRLVGATLYVTLEPCAMCAMALVHARIARVVYGAADPKTGACGSVFDVIGDPR 333 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + + + + ++F+ +R Sbjct: 334 HNHRVQVQGGVLGEEAGRRLTNYFRAKR 361 >gi|291452772|ref|ZP_06592162.1| deaminase [Streptomyces albus J1074] gi|291355721|gb|EFE82623.1| deaminase [Streptomyces albus J1074] Length = 142 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 52/142 (36%), Positives = 74/142 (52%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EAQ A ++PVGAV + + +++S A N D TAHAEILA+R Sbjct: 1 MRQALAEAQRAGRGGDVPVGAVVLDPDGRLLSAAHNEREADGDPTAHAEILALRRAAARS 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L VTLEPCTMCA A +R+ R+ YGA + K G + +H P Sbjct: 61 GRWRLTDCTLVVTLEPCTMCAGAAVQSRVDRVVYGARDEKAGAAGSLWDVVRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 E+ G+ ++ +FF+ R Sbjct: 121 EVIEGVLAADCAALLTEFFRAR 142 >gi|282863444|ref|ZP_06272503.1| CMP/dCMP deaminase zinc-binding [Streptomyces sp. ACTE] gi|282561779|gb|EFB67322.1| CMP/dCMP deaminase zinc-binding [Streptomyces sp. ACTE] Length = 142 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 52/142 (36%), Positives = 73/142 (51%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA AA ++PVGAV + + ++ N D TAHAE+LA+R +L Sbjct: 1 MRQALHEAAQAASAGDVPVGAVVLGPDGAPLATGHNEREATGDPTAHAEVLALRRAASVL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA A+ +R+ R+ YGA + K G + +H P Sbjct: 61 GGWRLTGCTLVVTLEPCTMCAGALVQSRVARVVYGARDEKAGAAGSLWDVLRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 E+ G+ E+ + FF+ER Sbjct: 121 EVVYGVLEETCAAQLTAFFRER 142 >gi|317475163|ref|ZP_07934430.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides eggerthii 1_2_48FAA] gi|316908616|gb|EFV30303.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides eggerthii 1_2_48FAA] Length = 144 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 79/147 (53%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 N +M AL EAQ A R E+PVGAV V +++I+RA N L DVTAHAE+ AI Sbjct: 2 DDNYYMKQALLEAQKAGDRGEVPVGAVVVCKDRVIARAHNLTETLTDVTAHAEMQAITAA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L E LYVT+EPC MCA AI+ A+ RL +GA + K G Q Y Sbjct: 62 ASTLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGRLVFGAEDEKRG-----YQRYAPHAL 116 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ ++++FF +R Sbjct: 117 HPKTVVVKGVLGDECAALMKNFFAGKR 143 >gi|325207969|gb|ADZ03421.1| putative tRNA-specific adenosine deaminase [Neisseria meningitidis NZ-05/33] Length = 148 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 57/144 (39%), Positives = 81/144 (56%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALE+A+ +AL EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 3 HFMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSE 62 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + + Sbjct: 63 MQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTH 122 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 I GI ++ R ++ FF+ +R Sbjct: 123 TAIRGGILQEECRAVLSRFFQNKR 146 >gi|326571142|gb|EGE21166.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis BC7] Length = 159 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 58/143 (40%), Positives = 80/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M+ ALE A+ A EIPVGAV V +I+ N +D TAHAEI+A+R C L+ Sbjct: 7 MNRALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRACETLN 66 Query: 68 QEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP LYVTLEPCTMC A+ ARI R+ +GA PK G + + + +H Sbjct: 67 NYRLPKGCILYVTLEPCTMCFGALIHARISRVVFGAFEPKAGVVVSQLKLPEQVFYNHHL 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +Y G+ +S ++ FF++RR Sbjct: 127 SVYGGLLADKSSALLSGFFRQRR 149 >gi|328545044|ref|YP_004305153.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [polymorphum gilvum SL003B-26A1] gi|326414788|gb|ADZ71851.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Polymorphum gilvum SL003B-26A1] Length = 176 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 69/128 (53%), Positives = 93/128 (72%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V + ++++ GNR EL D TAHAE+L IR C L + L DLYVTLE Sbjct: 49 GEVPVGAVLVCDGRVVAADGNRTLELNDPTAHAEMLVIRAACAALGSQRLSGCDLYVTLE 108 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AIS ARIRRLYYGA + KGG +++G +F+ TCHH+PE+Y GI E+ + +++ Sbjct: 109 PCPMCAGAISFARIRRLYYGAGDEKGGAVDHGVRFFASPTCHHAPEVYAGIGERPAGELL 168 Query: 142 QDFFKERR 149 +DFF++RR Sbjct: 169 KDFFRDRR 176 >gi|332666401|ref|YP_004449189.1| CMP/dCMP deaminase zinc-binding protein [Haliscomenobacter hydrossis DSM 1100] gi|332335215|gb|AEE52316.1| CMP/dCMP deaminase zinc-binding protein [Haliscomenobacter hydrossis DSM 1100] Length = 148 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 62/146 (42%), Positives = 84/146 (57%), Gaps = 5/146 (3%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL+EAQ A EIPVGAV N+II+R N +L DVTAHAEIL+I Sbjct: 7 DEYFMQEALKEAQLAFEEGEIPVGAVIACENRIIARGHNTTEKLLDVTAHAEILSITAAS 66 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L+ + LP+ LYVTLEPC MCA AI A++ RL YGA + K G + G + H Sbjct: 67 NYLNSKYLPDCTLYVTLEPCNMCAGAIFWAQMGRLVYGAGDEKRGFMRIGKEL-----LH 121 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 + G+ + Q++++FF++ R Sbjct: 122 PKTTLEYGVLHEECSQLLKEFFQKIR 147 >gi|319406589|emb|CBI80231.1| Cytosine/adenosine deaminase [Bartonella sp. 1-1C] Length = 150 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 77/142 (54%), Positives = 96/142 (67%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ A ++EIPVGAV II+RAGN + D T HAE+ IR+ C+I Sbjct: 6 MEIALLEAQLAKKQDEIPVGAVITHGQTIIARAGNYIKTPHDPTGHAEMRVIRIACQIFK 65 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E +PE DLYVTLEPC MCAA IS ARIR LYY S+PKGG IE+G +FY TCHH P Sbjct: 66 SERIPECDLYVTLEPCAMCAATISFARIRNLYYATSDPKGGAIEHGPRFYQQQTCHHRPN 125 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G E+ + Q+++DFF ++R Sbjct: 126 VYSGFKEKEASQLLKDFFIQKR 147 >gi|225847988|ref|YP_002728151.1| tRNA-specific adenosine deaminase [Sulfurihydrogenibium azorense Az-Fu1] gi|225643800|gb|ACN98850.1| tRNA-specific adenosine deaminase [Sulfurihydrogenibium azorense Az-Fu1] Length = 157 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 55/150 (36%), Positives = 86/150 (57%), Gaps = 2/150 (1%) Query: 1 MKK-GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 MK+ F+ A++EA+ A + E+PVGAV V ++K++S+ N K+ HAEI+AI Sbjct: 1 MKEINTKFIELAIKEAEKALKKGEVPVGAVLVKDDKVVSKGYNLRISKKNALYHAEIVAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 C+ L L + LY TLEPC MCA AI ARI+++ + A + KGG + + + Sbjct: 61 ERACKKLKSWRLDDTVLYTTLEPCLMCAGAIMQARIKKVVFLAKDEKGGAVLSNYTVFDD 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 E Y I ++R+ ++++DFFK R Sbjct: 121 KKLPFKVE-YSYIPDERAEKLLKDFFKILR 149 >gi|300813981|ref|ZP_07094274.1| cytidine and deoxycytidylate deaminase zinc-binding region [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511875|gb|EFK39082.1| cytidine and deoxycytidylate deaminase zinc-binding region [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 157 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 53/144 (36%), Positives = 80/144 (55%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALE A+ + ++PVG V V + KII + N+ + K+ HAEI AI C+ Sbjct: 10 YFMKKALELAKISYKNFDVPVGCVIVKDKKIIGQGYNQKEKKKNPLCHAEINAINSACKN 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L+ L + D+YVTLEPC MC AI ARI+ LY+GA N + G + + + +H Sbjct: 70 LNSYHLEDCDMYVTLEPCLMCVGAIINARIKNLYFGAYNYRFGAVLSHVELLKDGGFNHK 129 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 GI ++ S +++ FF++ R Sbjct: 130 TNYQGGILKEESARLLNSFFEKLR 153 >gi|325134098|gb|EGC56751.1| tRNA-specific adenosine deaminase [Neisseria meningitidis M13399] gi|325206234|gb|ADZ01687.1| tRNA-specific adenosine deaminase [Neisseria meningitidis M04-240196] Length = 163 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL +A+ +A EIPVGAV V + KII+ A N +V+ HAEI A+ Sbjct: 14 EEMEHFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSCHAEINALAQ 73 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L D+Y+TLEPC MCA+A+ ARIRR+ YGA+ PK G + + Sbjct: 74 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 133 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + I GI ++ R ++ FF+ +R Sbjct: 134 LNTHTAIRGGILQEECRAVLNRFFQNKR 161 >gi|293608246|ref|ZP_06690549.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828819|gb|EFF87181.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325122022|gb|ADY81545.1| tRNA-specific adenosine deaminase [Acinetobacter calcoaceticus PHEA-2] Length = 167 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 57/144 (39%), Positives = 75/144 (52%), Gaps = 1/144 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A E+A+ AA + EIPVGAV V N++I N L D TAHAEI AIR Sbjct: 5 SDEYWMQLAYEQAELAAQQGEIPVGAVLVSQNRVIGSGYNAPITLLDPTAHAEIQAIRAA 64 Query: 63 CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C L LP + LYVTLEPCTMC A+ ARI+ + +G PK G + + Q Sbjct: 65 CSSLENYRLPEDTTLYVTLEPCTMCVGALVHARIKHVVFGTPEPKAGSLVSARQLLQQGY 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 +H G +++ Q + FF Sbjct: 125 YNHRFTFQNGCLQEKCAQQLSHFF 148 >gi|297200779|ref|ZP_06918176.1| deaminase [Streptomyces sviceus ATCC 29083] gi|297147728|gb|EDY56383.2| deaminase [Streptomyces sviceus ATCC 29083] Length = 162 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 4/143 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL+EA A ++PVGAV + + +++ N + D TAHAE+LAIR Sbjct: 22 MRLALDEAGRAGT--DVPVGAVVLSPDGTTVLAAGHNEREAVGDPTAHAEVLAIRRAAAE 79 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L L VTLEPCTMCA AI +R+ R+ YGA + K G + +H Sbjct: 80 LGEWRLTGCTLVVTLEPCTMCAGAIVQSRVDRVVYGARDEKAGAAGSLWDVVRDRRLNHR 139 Query: 126 PEIYPGISEQRSRQIIQDFFKER 148 PE+ G+ Q++ FF++R Sbjct: 140 PEVVEGVLAAECAQLLTAFFRDR 162 >gi|228472860|ref|ZP_04057617.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga gingivalis ATCC 33624] gi|228275442|gb|EEK14219.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga gingivalis ATCC 33624] Length = 145 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 84/147 (57%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL+EAQ A + E+PVGAV + +II++A N +L DVTAHAE+ AI Sbjct: 4 SDTYFMQKALQEAQIAFEQGEVPVGAVITIGERIIAKAHNLTEKLTDVTAHAEMQAITAA 63 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L + LYVTLEPC MCA A+ ++I ++ YGA++ K G + Sbjct: 64 SEYLGGKYLMDCTLYVTLEPCVMCAGALYWSQIGKVVYGATDSKRG-----YHLFGN-LL 117 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ E+ QI++DFF +RR Sbjct: 118 HPKTQVVQGVLEEPCSQIVKDFFLQRR 144 >gi|86140825|ref|ZP_01059384.1| putative cytosine/adenosine deaminase [Leeuwenhoekiella blandensis MED217] gi|85832767|gb|EAQ51216.1| putative cytosine/adenosine deaminase [Leeuwenhoekiella blandensis MED217] Length = 151 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 63/147 (42%), Positives = 86/147 (58%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM AL+EA+ A EIPVGAV +NN+II+RA N L DVTAHAE+ AI Sbjct: 8 DDHYFMKKALQEAETAFELGEIPVGAVVTVNNRIIARAHNLTERLHDVTAHAEMQAITAA 67 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L + LYVTLEPC MCA A+ ++I R+ +GA++ G + GTQ Sbjct: 68 ANFLGGKYLTDSTLYVTLEPCQMCAGALYWSQISRIVFGAADTTRGYQKMGTQL------ 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ GI E + Q+++ FF ERR Sbjct: 122 HPKTQVTSGIMETEAAQLLKRFFIERR 148 >gi|327191131|gb|EGE58176.1| CMP/dCMP deaminase zinc-binding protein [Rhizobium etli CNPAF512] Length = 145 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 86/142 (60%), Positives = 108/142 (76%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA+ A R E+P+GAV V+++ +SR+GNR RE DVTAHAEI AIR+ C L Sbjct: 1 MEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRERNDVTAHAEIAAIRLACEALG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 QE L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FY TCHH+PE Sbjct: 61 QERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYAQPTCHHAPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G +E +S +I++ FF ++R Sbjct: 121 VYSGFNEVQSAEILRTFFSQKR 142 >gi|317051389|ref|YP_004112505.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum S5] gi|316946473|gb|ADU65949.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum S5] Length = 167 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 71/147 (48%), Positives = 91/147 (61%), Gaps = 1/147 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM+ ALEEA+ AA R E+PVGAV V + +II+RAGNR E +D TAHAE+LAIR Sbjct: 9 DAERFMAVALEEARQAAQRGEVPVGAVIVRHGEIIARAGNRKEEHRDPTAHAEVLAIREA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L +V+LYVTLEPC MC AI ARI R+YY S+ K GGI + Sbjct: 69 AAACANWRLEDVELYVTLEPCVMCCGAIIAARIPRVYYACSDEKYGGI-SLFAMTADQRL 127 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ EQR RQ+++ FF RR Sbjct: 128 NHQVDARRGLLEQRCRQLLEAFFSTRR 154 >gi|220910074|ref|YP_002485385.1| CMP/dCMP deaminase [Cyanothece sp. PCC 7425] gi|219866685|gb|ACL47024.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7425] Length = 174 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 71/149 (47%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M A+ A+ A E+PVGA+ V +++ NR D TAHAEILA+R Sbjct: 8 QQHCEWMEQAIALAEQAGAAGEVPVGAIVVSPQGELLGTGENRRERDGDPTAHAEILALR 67 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L LYV LEPC MCA AI ARI L YGA + K G I Sbjct: 68 AAGQKLQTWYLKNCTLYVNLEPCPMCAGAILQARIGLLVYGADDAKTGAIRTVLNLPDSR 127 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H GI E RQ +Q +F +R Sbjct: 128 CSFHRLTTLGGILETTCRQQLQTWFARKR 156 >gi|167752821|ref|ZP_02424948.1| hypothetical protein ALIPUT_01082 [Alistipes putredinis DSM 17216] gi|167659890|gb|EDS04020.1| hypothetical protein ALIPUT_01082 [Alistipes putredinis DSM 17216] Length = 148 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 8/152 (5%) Query: 1 MKK---GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M++ FM AL EA+ A E+P+GAV V + +I+ R N L D TAHAE+ Sbjct: 1 MEQQQPDEKFMRLALNEAEKALEEQEVPIGAVVVADGRIVGRGHNLVETLADATAHAEMQ 60 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 A+ + + L E LYVT+EPC MCA AI+ +++ R+ YGA +PK G + Y Sbjct: 61 ALTAAASTVGGKYLSECTLYVTVEPCIMCAGAIAWSQVGRVVYGADDPKRG-----YRRY 115 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + G+ + ++++ FF R Sbjct: 116 SEQVFPPRTTVTRGVLAEECERLVRSFFAALR 147 >gi|28209851|ref|NP_780795.1| cytosine deaminase [Clostridium tetani E88] gi|28202286|gb|AAO34732.1| cytosine deaminase [Clostridium tetani E88] Length = 146 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 1/145 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+ EA+ A NE+P+GAV V NKII R N + K+ AHAEI+AIR C+ Sbjct: 3 EYFMKEAVLEARKALNINEVPIGAVIVKENKIIGRGHNLVEKSKNPLAHAEIIAIREACK 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 ++ L +YVTLEPC MCA AI +R+ ++Y G +P G + Sbjct: 63 SINNWRLNGCHMYVTLEPCPMCAGAIIRSRMDKVYIGTFDPNSGACGTIINLTQNKYLNT 122 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + I + ++ S +++ FF RR Sbjct: 123 NININW-LYDEESSTLLKKFFYSRR 146 >gi|256820484|ref|YP_003141763.1| CMP/dCMP deaminase zinc-binding [Capnocytophaga ochracea DSM 7271] gi|256582067|gb|ACU93202.1| CMP/dCMP deaminase zinc-binding [Capnocytophaga ochracea DSM 7271] Length = 144 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM ALEEAQ A +EIPVGA+ ++N+II++A N L DVTAHAE+ AI Sbjct: 1 MNTDEYFMQKALEEAQLAFEEDEIPVGAIITIDNRIIAKAHNLTERLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M L + L +Y+TLEPC MCA A+ +++ RL Y A + G G Sbjct: 61 MAAHYLGGKYLIGCTMYLTLEPCAMCAGALYWSQLSRLVYAAPDTHRGYSVMG------G 114 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI Q + +++ FF+++R Sbjct: 115 KLHPKTEVVTGILSQEATTLLKQFFQQKR 143 >gi|326560462|gb|EGE10844.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis 7169] Length = 159 Score = 197 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + M+ ALE A+ A EIPVGAV V +I+ N +D TAHAEI+A+R Sbjct: 2 RDVEMMNHALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRA 61 Query: 63 CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C L+ LP LYVTLEPCTMC A+ ARI R+ +GA PK G + + + Sbjct: 62 CETLNNYRLPKGCILYVTLEPCTMCFGALIHARISRVVFGAFEPKAGVVVSQLKLPEQVF 121 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +Y G+ +S ++ FF++RR Sbjct: 122 YNHHLSVYGGLLADKSSALLSGFFRQRR 149 >gi|326790135|ref|YP_004307956.1| CMP/dCMP deaminase zinc-binding protein [Clostridium lentocellum DSM 5427] gi|326540899|gb|ADZ82758.1| CMP/dCMP deaminase zinc-binding protein [Clostridium lentocellum DSM 5427] Length = 175 Score = 197 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 85/149 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+K FM AL EA+ A +E P+GAV V ++I R NR K+ AHAE++AI Sbjct: 1 MEKDIEFMKQALIEAEKAFTLDEAPIGAVIVYKEQVIGRGHNRRNTDKNALAHAEVMAIN 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ + L E +Y+TLEPC MC+ AI AR+ R+ +GA +PK G + + Sbjct: 61 EACKHIKDWRLEECTIYITLEPCPMCSGAIVQARLPRVVFGARSPKAGFGGSVLNILQMD 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ + Q+++ +FK+ R Sbjct: 121 ELNHRCEVVEGVCEEEASQLLKSYFKQMR 149 >gi|83309336|ref|YP_419600.1| cytosine/adenosine deaminase [Magnetospirillum magneticum AMB-1] gi|82944177|dbj|BAE49041.1| Cytosine/adenosine deaminase [Magnetospirillum magneticum AMB-1] Length = 148 Score = 197 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 75/129 (58%), Positives = 96/129 (74%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 R E+PVGAV V + ++I++AGNR EL D TAHAE+LA+R L + L + DLYVTL Sbjct: 20 RGEVPVGAVIVKDGQVIAQAGNRVEELGDSTAHAEMLALRAATLFLGDKRLEDCDLYVTL 79 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCAAAISLARIRRLY+GA +PK GG+E+G + + ATCHH PE+Y G+ E+RS + Sbjct: 80 EPCPMCAAAISLARIRRLYFGAYDPKSGGVEHGAKVFDHATCHHRPEVYGGLEERRSASL 139 Query: 141 IQDFFKERR 149 + FF ERR Sbjct: 140 LSRFFAERR 148 >gi|259502690|ref|ZP_05745592.1| tRNA-specific adenosine deaminase [Lactobacillus antri DSM 16041] gi|259169335|gb|EEW53830.1| tRNA-specific adenosine deaminase [Lactobacillus antri DSM 16041] Length = 173 Score = 197 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 64/146 (43%), Positives = 88/146 (60%), Gaps = 1/146 (0%) Query: 1 MKKG-NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 MK+ FM+ A+ EA+ AAL NE+P+GAV V + +II R N +DVT HAE+LAI Sbjct: 10 MKQEQEQFMAAAVAEARQAALLNEVPIGAVVVKDQQIIGRGHNMREHFQDVTYHAEMLAI 69 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 C L L DLYVTLEPC MC+ AI ARI LYYGA++PK G +E+ Sbjct: 70 MEACERLHSWRLEGCDLYVTLEPCIMCSGAIINARIANLYYGAADPKAGAVESLYHLMND 129 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145 +H ++ G+ ++ Q+++DFF Sbjct: 130 PRLNHQVQVASGVMQEECSQMLKDFF 155 >gi|49475071|ref|YP_033112.1| nitrogen fixation protein [Bartonella henselae str. Houston-1] gi|49237876|emb|CAF27072.1| Nitrogen fixation protein [Bartonella henselae str. Houston-1] Length = 148 Score = 197 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 81/142 (57%), Positives = 98/142 (69%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ AA ++E+PVGAV II RAGN + D T HAEI IRM C Sbjct: 6 MEIALLEAQWAAKKDEVPVGAVITRGQSIIVRAGNSIKAAYDPTGHAEIRVIRMACAAFQ 65 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E LP+ DLYVTLEPC MCAAAIS ARIRRLYY S+PKGG IE+G + Y +TCHHSPE Sbjct: 66 SERLPDCDLYVTLEPCAMCAAAISFARIRRLYYATSDPKGGAIEHGPRLYKQSTCHHSPE 125 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G E+ + Q+++DFF ++R Sbjct: 126 VYSGFKEKEAAQLLKDFFAQKR 147 >gi|186684043|ref|YP_001867239.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102] gi|186466495|gb|ACC82296.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102] Length = 161 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 61/147 (41%), Positives = 81/147 (55%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62 +MSCALE A+ A E+PVGAV + + K++++ NR KD TAHAEILA++ Sbjct: 11 HQEWMSCALELAKVAGDAGEVPVGAVIIDSTGKLLAQGENRKERDKDPTAHAEILALKTA 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L E LYVTLEPC MCA AI AR+ +L YG + K G I A Sbjct: 71 ATTLQNWHLNECTLYVTLEPCPMCAGAILQARVGQLVYGVDDTKTGAIRTVINIPDSAAS 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ GI E R+ +Q +F RR Sbjct: 131 NHGLQVIGGILESACREQLQAWFATRR 157 >gi|92112967|ref|YP_572895.1| tRNA-adenosine deaminase [Chromohalobacter salexigens DSM 3043] gi|91796057|gb|ABE58196.1| tRNA-adenosine deaminase [Chromohalobacter salexigens DSM 3043] Length = 151 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M+ +M AL++A A E+PVGAV V + I+ N D +AHAE+ A+ Sbjct: 1 MRSDTFYMHRALDQAHRALEAGEVPVGAVVVARDGDIVGTGFNAPVSSHDPSAHAEVRAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R L L L+VTLEPC MC AI AR+ R+ Y A+ P+ G +E+ + Sbjct: 61 RDAAERLGNYRLEGCTLFVTLEPCLMCTGAIIHARVARVVYAAAEPRSGMVESRANLFAQ 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ R+ +++ FF RR Sbjct: 121 PWFNHRVEVEGGVLASRATHLLKAFFAARR 150 >gi|218440469|ref|YP_002378798.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424] gi|218173197|gb|ACK71930.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424] Length = 162 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 76/148 (51%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 +MS A+ AQ AA ++PVGAV + K+I+ NR +D TAHAEI+ +R Sbjct: 15 DHKRWMSRAITLAQEAAQAGDVPVGAVIIDEKGKLIAEGSNRKERDQDPTAHAEIIVLRR 74 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 ++L L + LYVTLEPC MC AI ARI L YG +PK G I Sbjct: 75 ASQVLQTWHLQQCKLYVTLEPCPMCTGAIIQARIALLIYGVDDPKTGTIRTVANLPDSPC 134 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E R +Q +F ++R Sbjct: 135 SNHRLSVISGIMESACRHQLQTWFAQKR 162 >gi|169351621|ref|ZP_02868559.1| hypothetical protein CLOSPI_02401 [Clostridium spiroforme DSM 1552] gi|169291843|gb|EDS73976.1| hypothetical protein CLOSPI_02401 [Clostridium spiroforme DSM 1552] Length = 148 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 83/149 (55%), Gaps = 2/149 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM A +EA ++E+PVGAV V NN++IS A N TAHAEILAI Sbjct: 1 MNQDIKFMEIAYQEALKCLEKDEVPVGAVIVKNNEVISCAHNLRETTNLATAHAEILAIN 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L E LYVTLEPC MC+ AI +RI+++ +GA + + + Sbjct: 61 EACKKLESWYLDECTLYVTLEPCVMCSGAIINSRIKKVVFGAFENRWLALTSIYN--CNF 118 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PEI GI + +II+++FK +R Sbjct: 119 PVNHRPEIVTGILGDKCSKIIKEYFKIKR 147 >gi|53711997|ref|YP_097989.1| putative cytosine/adenosine deaminase [Bacteroides fragilis YCH46] gi|60680198|ref|YP_210342.1| cytosine deaminase [Bacteroides fragilis NCTC 9343] gi|253563968|ref|ZP_04841425.1| cytosine deaminase [Bacteroides sp. 3_2_5] gi|265765335|ref|ZP_06093610.1| ComE operon protein 2 [Bacteroides sp. 2_1_16] gi|52214862|dbj|BAD47455.1| putative cytosine/adenosine deaminase [Bacteroides fragilis YCH46] gi|60491632|emb|CAH06384.1| possible cytosine deaminase [Bacteroides fragilis NCTC 9343] gi|251947744|gb|EES88026.1| cytosine deaminase [Bacteroides sp. 3_2_5] gi|263254719|gb|EEZ26153.1| ComE operon protein 2 [Bacteroides sp. 2_1_16] gi|301161723|emb|CBW21263.1| possible cytosine deaminase [Bacteroides fragilis 638R] Length = 145 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM AL EA A R E+PVGAV V +II+RA N L DVTAHAE+ AI Sbjct: 1 MLDDSYFMKQALIEAVKAGERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y Sbjct: 61 AAANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDDKRG-----YQRYAPQ 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI +++DFF +R Sbjct: 116 ALHPKTVVVKGILADECAGLMKDFFAAKR 144 >gi|288942407|ref|YP_003444647.1| CMP/dCMP deaminase protein [Allochromatium vinosum DSM 180] gi|288897779|gb|ADC63615.1| CMP/dCMP deaminase zinc-binding protein [Allochromatium vinosum DSM 180] Length = 166 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 1/139 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ALE A+ AA E+PVGAV V +I+ NR D +AHAEI A+R Sbjct: 9 DVHWMRHALELARCAAEEGEVPVGAVLVREGEILGEGWNRPIIRHDPSAHAEIQALRDAG 68 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY-TLATC 122 R + LP LYVTLEPC MCA AI AR+ ++ YGA +PK G + + Sbjct: 69 RRVGNYRLPGSILYVTLEPCVMCAGAIVHARVAQVIYGAPDPKAGACGSVFDLLPSDGRF 128 Query: 123 HHSPEIYPGISEQRSRQII 141 +H E+ G+ + +++ Sbjct: 129 NHRTEVRGGLLAEDCGEVL 147 >gi|332185526|ref|ZP_08387274.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Sphingomonas sp. S17] gi|332014504|gb|EGI56561.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Sphingomonas sp. S17] Length = 142 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 75/142 (52%), Positives = 93/142 (65%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+ A+ A E+PVGAV V + +++S A N R L D TAHAEI AIR L Sbjct: 1 MRLALDAARRAGEEGEVPVGAVIVRHGQVVSVAANAPRRLHDPTAHAEIQAIRAAAEKLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 +E L E DL+VTLEPC MCA AI+ ARI RLYY AS+PKGG +E+G +F+ TCHH PE Sbjct: 61 RERLEECDLWVTLEPCAMCAGAIAHARIARLYYAASDPKGGAVEHGPRFFGQPTCHHRPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IY GI E +++ FF RR Sbjct: 121 IYAGIGEAEGAALLRSFFAARR 142 >gi|229816552|ref|ZP_04446851.1| hypothetical protein COLINT_03609 [Collinsella intestinalis DSM 13280] gi|229807887|gb|EEP43690.1| hypothetical protein COLINT_03609 [Collinsella intestinalis DSM 13280] Length = 632 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL EA+ AA E+P+GAV V II+RA NR +D +AHAE LA+ Sbjct: 15 EDDERFMREALAEARAAAEVGEVPIGAVVVHKGTIIARAHNRRELDEDPSAHAEFLAMMQ 74 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L + L +YVTLEPC MC+ + ARI R YGA++PKGG + Sbjct: 75 AARTLGRWRLSGCTVYVTLEPCLMCSGLMVNARIDRCVYGATDPKGGALGTLYDVSADPR 134 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ + GI E ++ FF+ R Sbjct: 135 LNHAFPVVSGILEDECAAELRSFFRRLR 162 >gi|194366203|ref|YP_002028813.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia R551-3] gi|194349007|gb|ACF52130.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia R551-3] Length = 174 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 2/150 (1%) Query: 2 KKGNVFMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 +M AL A+ A +EIPVGAV V + +++ N N D +AHAEI+A+ Sbjct: 11 DTDEHWMRHALALAERAQREFDEIPVGAVLVSADGQLLGEGWNLNIASHDPSAHAEIVAM 70 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R G ++L+ L LYVTLEPC MCA AI AR+ RL YGAS+PK G + Sbjct: 71 RSGGKLLANHRLLGSTLYVTLEPCAMCAMAIVHARVARLVYGASDPKTGACGSVFDLLGD 130 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI+ G+ + + + ++F+ +R Sbjct: 131 GRHNHRVEIHGGVLAKEASMRLTNYFRTKR 160 >gi|332519171|ref|ZP_08395638.1| CMP/dCMP deaminase, zinc-binding [Lacinutrix algicola 5H-3-7-4] gi|332045019|gb|EGI81212.1| CMP/dCMP deaminase, zinc-binding [Lacinutrix algicola 5H-3-7-4] Length = 149 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 84/147 (57%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 N FM AL+EA+ A + EIPVGAV V+ N+II+RA N L DVTAHAE+ AI Sbjct: 6 DDNYFMKKALQEAEVAFDKGEIPVGAVIVIENRIIARAHNLTELLNDVTAHAEMQAITAA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L LYVTLEPC MCA A+ +++ ++ YGA + + G I T+ Sbjct: 66 ANFLGGKYLKNCTLYVTLEPCQMCAGALYWSQVSKIVYGARDEERGCINLQTKL------ 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ GI + + +++ FF E+R Sbjct: 120 HPKTKLEGGILAKEASSLMKRFFIEKR 146 >gi|319790641|ref|YP_004152274.1| CMP/dCMP deaminase zinc-binding protein [Thermovibrio ammonificans HB-1] gi|317115143|gb|ADU97633.1| CMP/dCMP deaminase zinc-binding protein [Thermovibrio ammonificans HB-1] Length = 148 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 54/147 (36%), Positives = 84/147 (57%), Gaps = 1/147 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 F+ AL EA+ A E+P+GAV V N ++I++A NR L+D TAHAE++AIR Sbjct: 2 NDLYFLRLALREAEKALSFGEVPIGAVVVRNGEVIAKAFNRKEFLQDPTAHAELIAIREA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L+ L + +Y T+EPC MC AI +RI+R+ Y +PK GG+E+ + Sbjct: 62 ARKLNSWRLNDCTIYSTVEPCIMCCGAIIQSRIKRVVYSTPDPKFGGVESLYRLLGDERN 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ + ++++ FF+ R Sbjct: 122 NHRPEVVKLELPES-EELLKAFFRSLR 147 >gi|299143513|ref|ZP_07036593.1| cytidine/deoxycytidylate deaminase family protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517998|gb|EFI41737.1| cytidine/deoxycytidylate deaminase family protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 153 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 86/149 (57%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + + FM+ AL+ A+ + +IP+GA+ V N++II R N+ LKD +AHAE++A++ Sbjct: 1 MNRNDFFMNEALKLAKISYDNGDIPIGAIIVFNDEIIGRGFNKKELLKDASAHAELIAMK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L+ L + +YVTLEPC MCA AI R++++Y GA N + G + Sbjct: 61 EASKFLNSYHLEDCTMYVTLEPCAMCAGAILNFRLKKIYIGAKNERFGCCGSKINLLN-Y 119 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ E GI E + +I +FF E R Sbjct: 120 NFNHTCECEFGILEDDCKNLISNFFIELR 148 >gi|62262991|gb|AAX78118.1| unknown protein [synthetic construct] Length = 188 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 1/148 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A ++A A E+P+GAV V +++II + N+ L D TAHAEIL +R Sbjct: 32 DQDIFFMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLRS 91 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L LYVTLEPC MC + AR+ L Y + + G + + + Sbjct: 92 AALKLGNYRLVNTKLYVTLEPCIMCLGGLIQARVPELVYACDDSRVGAF-SREKLHHNKN 150 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ + G+ ++++DFFK+RR Sbjct: 151 INHNLGVTAGVMADECSKLLKDFFKQRR 178 >gi|190571610|ref|YP_001975968.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357882|emb|CAQ55341.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 141 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 71/144 (49%), Positives = 95/144 (65%), Gaps = 8/144 (5%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M+ A+E+A+ A E+P+GAV V N IIS A N D TAHAE+L IR Sbjct: 5 QYMALAIEQAKLAQKDGEVPIGAVIVNGNNIISSAHN---ISNDPTAHAEMLTIRQA--- 58 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 S L E ++YVTLEPC MCA AIS A+I+RLY+GA NPKGGG+ENGT+ + C+H Sbjct: 59 FSTSTLYEAEMYVTLEPCPMCAQAISFAKIKRLYFGAYNPKGGGVENGTRIFQF--CNHI 116 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+Y GI E + +++DFF++ R Sbjct: 117 PEVYGGILETKCSLLLKDFFEKLR 140 >gi|307152204|ref|YP_003887588.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822] gi|306982432|gb|ADN14313.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822] Length = 162 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 61/148 (41%), Positives = 80/148 (54%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +MS A+ AQ AAL ++PVGAV + ++I+ A NR +D TAHAEIL +R Sbjct: 15 KHQQWMSRAIVLAQQAALAGDVPVGAVILDREGRLIAEASNRKERDQDPTAHAEILVLRR 74 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 +IL L LYVTLEPC MC AI ARI L YG +PK G I + Sbjct: 75 ASQILKTWHLEACYLYVTLEPCPMCTGAIIQARIGLLVYGVDDPKTGTIRTVANLPDSSC 134 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E R+ +Q +F +RR Sbjct: 135 SNHRLSVLSGIMESACREQLQTWFAQRR 162 >gi|118496774|ref|YP_897824.1| zinc-binding protein [Francisella tularensis subsp. novicida U112] gi|118422680|gb|ABK89070.1| zinc-binding protein [Francisella novicida U112] Length = 153 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 1/148 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A ++A A E+P+GAV V + +II++ N+ L D TAHAEIL +R Sbjct: 6 DQDIFFMQKAYQQALLAYQAGEVPIGAVLVRDGQIIAQNFNQTIGLNDPTAHAEILVLRS 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L LYVTLEPC MC + AR+ L Y + + G + + + Sbjct: 66 AALKLDNYRLVNTKLYVTLEPCIMCLGGLIQARVPELVYACDDSRVGAF-SREKLHHNKN 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ + G+ ++++DFFK+RR Sbjct: 125 INHNLGVTAGVMADECGKLLKDFFKQRR 152 >gi|116617403|ref|YP_817774.1| tRNA-adenosine deaminase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096250|gb|ABJ61401.1| tRNA-adenosine deaminase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 168 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ + FM AL EA+ A E+P+GAV V N++I+ A N + TAHAE+LAI Sbjct: 10 EQIDYFMQEALNEAKIAQSEGEVPIGAVIVYENQMIACAHNHREADQLATAHAELLAIES 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L L+VTLEPC MCA AI ARI +YYGA++PKGG + Sbjct: 70 ANTKLKSWRLENTALFVTLEPCIMCAGAIINARIPVVYYGANDPKGGATRSLYSLLEDNR 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++Y GI + S ++Q FF R Sbjct: 130 LNHMVKVYEGIRGEESGLLLQRFFSNIR 157 >gi|86748295|ref|YP_484791.1| CMP/dCMP deaminase, zinc-binding [Rhodopseudomonas palustris HaA2] gi|86571323|gb|ABD05880.1| tRNA-adenosine deaminase [Rhodopseudomonas palustris HaA2] Length = 148 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 70/127 (55%), Positives = 92/127 (72%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+P+G V V +I+ AGNR +D TAHAE+LAIR R L E L + DLYVTLEP Sbjct: 22 EVPIGCVIVRAGAVIASAGNRTLTDRDPTAHAELLAIREAARKLGSERLVDCDLYVTLEP 81 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 CTMCA AIS ARIRRLY+GA +PKGG +E+G +F+ TCHH+PEIY G+ E+ + +++ Sbjct: 82 CTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFFGQPTCHHAPEIYSGVGEREAAALLR 141 Query: 143 DFFKERR 149 +FF+ RR Sbjct: 142 EFFRARR 148 >gi|116333248|ref|YP_794775.1| cytosine/adenosine deaminase [Lactobacillus brevis ATCC 367] gi|116098595|gb|ABJ63744.1| tRNA-adenosine deaminase [Lactobacillus brevis ATCC 367] Length = 183 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 52/140 (37%), Positives = 79/140 (56%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL EA+ AA+ E+P+G+V V + +II R N D T HAEI AI C Sbjct: 12 HYMEEALFEAEQAAVIGEVPIGSVIVHDGQIIGRGHNLREHGHDATLHAEIRAIEEACAT 71 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + LYVT+EPC MC+ AI ARI ++YGA +PK G +++ T + +H+ Sbjct: 72 LQSWRLNDCQLYVTIEPCLMCSGAIINARIPEVFYGARDPKAGAVDSLYATLTDSRLNHT 131 Query: 126 PEIYPGISEQRSRQIIQDFF 145 ++ G+ + + + + FF Sbjct: 132 VAVHEGLLAKDAGERMVAFF 151 >gi|167563146|ref|ZP_02356062.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia oklahomensis EO147] gi|167570332|ref|ZP_02363206.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia oklahomensis C6786] Length = 193 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M ALE A A E+PVGAV V +++I+R N D +AHAE+ A+R Sbjct: 26 ERDRRYMRMALEAADEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 85 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L +P +LYVTLEPC MC+ AI ARI R+ +GA +PK G + + A Sbjct: 86 AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 145 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ FF ERR Sbjct: 146 LNHHTAVEGGVLADECGAALKSFFAERR 173 >gi|319936699|ref|ZP_08011112.1| tRNA-adenosine deaminase [Coprobacillus sp. 29_1] gi|319808256|gb|EFW04821.1| tRNA-adenosine deaminase [Coprobacillus sp. 29_1] Length = 148 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 3/147 (2%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A +EA A +E+P+GA+ V ++ +I+ A N+ +DVTAHAE+LAI+ Sbjct: 2 TDIEYMKLAYQEAIKAKDIDEVPIGAIIVKDDCVIASAYNQKESKRDVTAHAEMLAIQKA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C+IL L LY TLEPC MC+ AI +RI ++ YGAS + GI Q+ T Sbjct: 62 CKILGTWHLDGCTLYSTLEPCMMCSGAIIQSRIAKVVYGASGQRWHGIS---QYLHNHTF 118 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P+I GI E+ Q+I D+FK +R Sbjct: 119 NHYPDITSGILEEDCCQLISDYFKSKR 145 >gi|237748635|ref|ZP_04579115.1| tRNA-specific adenosine deaminase [Oxalobacter formigenes OXCC13] gi|229379997|gb|EEO30088.1| tRNA-specific adenosine deaminase [Oxalobacter formigenes OXCC13] Length = 171 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 82/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +FM AL +A A E+PVGAV VL+ +II+R N+ D TAHAEI+A+R Sbjct: 2 SDEIFMREALAQAALAEEAGEVPVGAVVVLDGQIIARGFNQPITAHDPTAHAEIVALRNA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R LP+ +LYVTLEPC+MC A+ AR++R+ +GA P+ G + + Sbjct: 62 ARFCGNYRLPDCELYVTLEPCSMCVGAMIHARLKRVIFGAKEPRTGACGSIIDLFAQNEL 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ E S +++ FF RR Sbjct: 122 NHHTTVTGGVLENESSVLLKTFFAGRR 148 >gi|212550942|ref|YP_002309259.1| cytosine/adenosine deaminase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549180|dbj|BAG83848.1| putative cytosine/adenosine deaminase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 146 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ +M AL EAQ A + E+P+GAV V + +II+R+ N L D TAHAE+ AI Sbjct: 2 LQEDEYYMKQALLEAQKAFEKAEVPIGAVIVSDKRIIARSHNLTETLNDTTAHAEMQAIT 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L LYVT+EPC MCA A++ A+I+R+ YG + K G T Sbjct: 62 AASIALGGKYLTNCVLYVTVEPCPMCAGALAWAQIKRIVYGIKDEKRG-----YHKITPF 116 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ I + S +++ FFK++R Sbjct: 117 ILHPKTKVTSKILAEESGFLMKKFFKDKR 145 >gi|154494050|ref|ZP_02033370.1| hypothetical protein PARMER_03395 [Parabacteroides merdae ATCC 43184] gi|154086310|gb|EDN85355.1| hypothetical protein PARMER_03395 [Parabacteroides merdae ATCC 43184] Length = 147 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 82/147 (55%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL EA +AA E+PVGAV V NN+II+RA N+ L D TAHAE+LAI Sbjct: 6 NDEYFMKQALVEACSAAEEGEVPVGAVIVCNNQIIARAHNQTERLNDPTAHAEMLAITAA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L + L LYVT+EPC MCA AI +++ ++ YGA++ K G Q Y Sbjct: 66 VGVLGAKYLTGCSLYVTVEPCVMCAGAIGWSQLSKIVYGATDEKRG-----FQQYAPKAL 120 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E + ++ FF+ +R Sbjct: 121 HPKATVKKGVLENECAEEMRKFFQRKR 147 >gi|328954698|ref|YP_004372031.1| tRNA-adenosine deaminase [Coriobacterium glomerans PW2] gi|328455022|gb|AEB06216.1| tRNA-adenosine deaminase [Coriobacterium glomerans PW2] Length = 165 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 48/147 (32%), Positives = 73/147 (49%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL +A+ AA E+P+GA V I+RA NR + +AHAE +A+ Sbjct: 14 DDARFMREALAQARMAAELGEVPIGAAVVYEGDCIARAHNRRELDGNPSAHAEFVAMLKA 73 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L + L +YVT+EPC MCA + ARI R +GAS+PKGG + Sbjct: 74 SAVLGRWRLTGCTVYVTVEPCLMCAGLMVNARIDRCVFGASDPKGGALGTLFDVSRDPRL 133 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ + + + ++ FF + R Sbjct: 134 NHAFGVTRDVEREECSDLLTTFFADLR 160 >gi|307544260|ref|YP_003896739.1| CMP/dCMP deaminase, zinc-binding [Halomonas elongata DSM 2581] gi|307216284|emb|CBV41554.1| CMP/dCMP deaminase, zinc-binding [Halomonas elongata DSM 2581] Length = 155 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M+ +M A+++A+ A E+PVGAV V +I+ N D +AHAEI A+ Sbjct: 1 MRSDEYYMHRAMDQARRAEAAGEVPVGAVVVDRAGEIVGSGFNAPVSDHDPSAHAEIRAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R L L L+VTLEPC MC AI AR+ R+ YGA+ P+ G +E+ + Sbjct: 61 RDAGTRLGNYRLDGCTLFVTLEPCLMCTGAIIHARLARVVYGAAEPRSGMVESRANLFAQ 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ R + ++ FF ERR Sbjct: 121 PWYNHRVEVVGGVLAPRIAKHLKAFFAERR 150 >gi|300865868|ref|ZP_07110611.1| tRNA-adenosine deaminase [Oscillatoria sp. PCC 6506] gi|300336131|emb|CBN55769.1| tRNA-adenosine deaminase [Oscillatoria sp. PCC 6506] Length = 169 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 75/148 (50%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +MS A++ AQ A E+PVGA V K+I++ NR D TAHAEILA+R Sbjct: 17 THCQWMSRAIKLAQEAGEAGEVPVGAAIVDSQGKLIAQGQNRRERDCDPTAHAEILALRG 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L LYVTLEPC MCA AI ARI L YG +PK G I Sbjct: 77 AGIALQNWHLNACTLYVTLEPCPMCAGAIVQARIGLLVYGVDDPKSGTIRTVGNIPDSDC 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E R+ +Q +F +RR Sbjct: 137 SYHRLPVLGGIMESECREQLQSWFAKRR 164 >gi|15893419|ref|NP_346768.1| cytosine deaminase [Clostridium acetobutylicum ATCC 824] gi|15022950|gb|AAK78108.1|AE007525_2 Cytosine deaminase [Clostridium acetobutylicum ATCC 824] gi|325507531|gb|ADZ19167.1| Cytosine deaminase [Clostridium acetobutylicum EA 2018] Length = 147 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 82/149 (55%), Gaps = 3/149 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK N F++ A++EA+ A E+PVGAV V +NKII+ + N LK+ +AHAEI+AI Sbjct: 1 MK--NEFLNEAIKEAKLAKKEGEVPVGAVIVKDNKIIATSHNLKESLKNPSAHAEIIAIE 58 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L+ L ++YVTLEPC MCAA I +RI ++Y G +P G + Sbjct: 59 RAAKYLNNWRLNGCEMYVTLEPCPMCAACICQSRISKVYVGTFDPISGACGSVVNITEND 118 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + E+ + I++ FFK RR Sbjct: 119 YLRYHTEVEW-LYSNECSDILKGFFKARR 146 >gi|225630106|ref|YP_002726897.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia sp. wRi] gi|225592087|gb|ACN95106.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia sp. wRi] Length = 135 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 72/142 (50%), Positives = 92/142 (64%), Gaps = 8/142 (5%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+E+A+ A +E+P+GAV V + IIS A N D TAHAE+LAIR S Sbjct: 1 MELAIEQAKLAQKNDEVPIGAVIVSGDNIISSAHN---ISSDPTAHAEMLAIRQA---FS 54 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + D+YVTLEPC MCA AIS ARI+RLY+GA NPKGGGIENG + + C H PE Sbjct: 55 TSTLCDTDMYVTLEPCPMCAQAISFARIKRLYFGAYNPKGGGIENGAKIFQF--CSHIPE 112 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y GI E +++DFF++ R Sbjct: 113 VYGGILETECSFLLKDFFEKLR 134 >gi|254425304|ref|ZP_05039022.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Synechococcus sp. PCC 7335] gi|196192793|gb|EDX87757.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Synechococcus sp. PCC 7335] Length = 162 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 56/137 (40%), Positives = 79/137 (57%), Gaps = 1/137 (0%) Query: 14 EAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72 AQ A E+PV A+ V +N++++ A NR +D TAHAE+LAIR + L L Sbjct: 7 LAQEAGTAGEVPVAAIIVGPDNQLVASAANRKERDQDPTAHAEVLAIRAAAKHLGDWHLN 66 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132 + LYVTLEPC MCA AI AR+ L YG S+PK G I + + +H + G+ Sbjct: 67 QCTLYVTLEPCPMCAGAIIHARLGLLVYGTSDPKTGAIRSVLNLPDGPSSNHKLVVIGGV 126 Query: 133 SEQRSRQIIQDFFKERR 149 E +Q +QD+FK++R Sbjct: 127 LETVCKQQLQDWFKQKR 143 >gi|149375103|ref|ZP_01892875.1| cytidine/deoxycytidylate deaminase family protein [Marinobacter algicola DG893] gi|149360467|gb|EDM48919.1| cytidine/deoxycytidylate deaminase family protein [Marinobacter algicola DG893] Length = 166 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 57/144 (39%), Positives = 74/144 (51%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +MS AL+ A A E+PVGAV VL+ K I N D TAHAEI A+R Sbjct: 5 EEDEAWMSRALQLAGQAGAAGEVPVGAVVVLDGKEIGTGFNAPISGCDPTAHAEIRALRD 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + LP LYVTLEPCTMC AI +RI RL YGA+ PK G + + Q Sbjct: 65 AAARVGNYRLPGATLYVTLEPCTMCVGAIVHSRISRLVYGAAEPKAGAVASARQTLNEPH 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 + E G+ + +I +FF Sbjct: 125 LNWRVESVGGVLADQCSHVISEFF 148 >gi|254412813|ref|ZP_05026586.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Microcoleus chthonoplastes PCC 7420] gi|196180548|gb|EDX75539.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Microcoleus chthonoplastes PCC 7420] Length = 186 Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 84/149 (56%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 +K +M+ +L AQ+A E+PVGAV + N + +I+ NR +D TAHAEILA+R Sbjct: 11 QKHRHWMNRSLAIAQSAGEAGEVPVGAVIIDNQDNLIATGENRRERDRDPTAHAEILALR 70 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L+ L LYVTLEPC MC+ AI LAR+ L YGA +PK G I A Sbjct: 71 AAGQALNTWHLNTCTLYVTLEPCAMCSGAIILARLGLLVYGADDPKTGTIRTVANSPDSA 130 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E R+ ++ +F +RR Sbjct: 131 YSNHRLPVLAGIMETECREYLKSWFAQRR 159 >gi|328676234|gb|AEB27104.1| tRNA-specific adenosine-34 deaminase [Francisella cf. novicida Fx1] Length = 153 Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 1/148 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A ++A A E+P+GAV V +++II++ N+ L D TAHAEIL +R Sbjct: 6 DQDIFFMQKAYQQALLAYQAGEVPIGAVLVRDDQIIAQNFNQTIGLNDPTAHAEILVLRS 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L LYVTLEPC MC + AR+ L Y + + G + + + Sbjct: 66 AALKLDNYRLVNTKLYVTLEPCIMCLGGLIQARVPELVYACDDSRVGAF-SREKLHHNKN 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ + G+ ++++DFFK+RR Sbjct: 125 INHNLGVTAGVMADECGKLLKDFFKQRR 152 >gi|313812411|gb|EFS50125.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL025PA1] gi|327334354|gb|EGE76065.1| tRNA-specific adenosine deaminase [Propionibacterium acnes HL097PA1] Length = 149 Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL+ A+ AA ++P+GAV + N +++S AGN D TAHAE+LAIR Sbjct: 1 MTQALDVARRAATWGDVPIGAVILGANGEVLSEAGNERERTGDPTAHAEVLAIRRAAEAR 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPCTMCA I ARI R+ +GA +PK G + + H P Sbjct: 61 DGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDPKAGAVSSLFDVMRDPRLPHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + S ++++FF R Sbjct: 121 KVVTGVMAEESSALLREFFDGHR 143 >gi|39934239|ref|NP_946515.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris CGA009] gi|192289765|ref|YP_001990370.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris TIE-1] gi|39648087|emb|CAE26607.1| possible cytidine and deoxycytidylate deaminase [Rhodopseudomonas palustris CGA009] gi|192283514|gb|ACE99894.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris TIE-1] Length = 148 Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 69/128 (53%), Positives = 92/128 (71%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+P+G V V + +I++AGNR +D TAHAE+LAIR L E L + DLYVTLE Sbjct: 21 GEVPIGCVIVRDGVVIAKAGNRTLTDRDPTAHAELLAIREAAAKLGSERLVDCDLYVTLE 80 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PCTMCA AIS ARIRRLY+GA +PKGG +E+G +FY TCHH+PE+Y + E+ + ++ Sbjct: 81 PCTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFYGQPTCHHAPEVYSAVGEREAATML 140 Query: 142 QDFFKERR 149 ++FFK RR Sbjct: 141 REFFKARR 148 >gi|329889978|ref|ZP_08268321.1| tRNA-specific adenosine deaminase [Brevundimonas diminuta ATCC 11568] gi|328845279|gb|EGF94843.1| tRNA-specific adenosine deaminase [Brevundimonas diminuta ATCC 11568] Length = 154 Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 60/142 (42%), Positives = 84/142 (59%), Gaps = 2/142 (1%) Query: 10 CALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 AL+ AQ AA E+PVGAV V +++ R N D +AHAEI+A+R L Sbjct: 1 MALDLAQAAAEAGEVPVGAVIVDENTGEVLGRGQNGPITAHDPSAHAEIVALRDAAAKLQ 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L ++ LYVTLEPC MCA AIS ARI R+ +GA +PKGG + +G +F+ TCH P Sbjct: 61 NYRLTDLTLYVTLEPCAMCAGAISHARIGRVVWGADDPKGGAVLHGGRFFDQPTCHWRPR 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 G+ + ++++ FF+ RR Sbjct: 121 TESGVMADPAAEMLRSFFRSRR 142 >gi|295132290|ref|YP_003582966.1| cytidine/deoxycytidylate deaminase family protein [Zunongwangia profunda SM-A87] gi|294980305|gb|ADF50770.1| cytidine/deoxycytidylate deaminase family protein [Zunongwangia profunda SM-A87] Length = 149 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 77/147 (52%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A EEAQ A + EIPVG V V+ N+II+R N L DVTAHAE+ +I Sbjct: 6 DDTYFMKKAFEEAQIAFEKGEIPVGVVVVIKNRIIARGHNLTETLNDVTAHAEMQSITAA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L +YVTLEPC MCA A+ +++ RL + A + G + G Q Sbjct: 66 ASFLGGKYLKGCTMYVTLEPCQMCAGALYWSQLSRLVFAAKDDHRGYQKFGVQL------ 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI Q+++ FF ++R Sbjct: 120 HPKTEVSQGIMANECSQLLKKFFIQKR 146 >gi|327481727|gb|AEA85037.1| cytidine/deoxycytidylate deaminase [Pseudomonas stutzeri DSM 4166] Length = 160 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A+ A A E+PVGAV V +I+ R N D +AHAE++AIR Sbjct: 10 SQDERFMREAMALAAQGAALGEVPVGAVLVHEGQIVGRGFNCPISRHDPSAHAEMVAIRA 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LP LYVTLEPC+MCA I +R++R+ YGA+ PK G + + QF+ Sbjct: 70 AAQALQNYRLPGSTLYVTLEPCSMCAGLIVHSRVQRVVYGATEPKAGVVVSRGQFFDQGF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + ++ +FF++RR Sbjct: 130 LNHRVLVEGGVLAEECGAVLSEFFRQRR 157 >gi|224538014|ref|ZP_03678553.1| hypothetical protein BACCELL_02903 [Bacteroides cellulosilyticus DSM 14838] gi|224520361|gb|EEF89466.1| hypothetical protein BACCELL_02903 [Bacteroides cellulosilyticus DSM 14838] Length = 144 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 82/147 (55%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 N +M AL EA+ A+ R E+PVGAV V ++II+RA N L DVTAHAE+ AI Sbjct: 2 DDNYYMKQALIEARKASERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L E LYVT+EPC MCA AI+ A++ RL +GA + K G Q Y Sbjct: 62 ASTLGGKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAGDEKRG-----YQRYASQAL 116 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ + +++DFF +R Sbjct: 117 HPKTAVSQGVLGEECAVLMKDFFAAKR 143 >gi|217967615|ref|YP_002353121.1| CMP/dCMP deaminase zinc-binding [Dictyoglomus turgidum DSM 6724] gi|217336714|gb|ACK42507.1| CMP/dCMP deaminase zinc-binding [Dictyoglomus turgidum DSM 6724] Length = 156 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 53/146 (36%), Positives = 74/146 (50%), Gaps = 2/146 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM A++EA+ A + E+PVGAV V N +I+ R N K+ +HAE++AI Sbjct: 9 DEYFMHEAIKEAKKALRKGEVPVGAVIVYNGQIVGRGYNLRESKKNPISHAEMIAIEKAA 68 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L L LYVTLEPC MC AI +RI RL YG N + G + Sbjct: 69 KKLKGWRLCNCTLYVTLEPCIMCFGAILNSRISRLVYGTENREEGFTQFVN--IRDYKKW 126 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 EI GI + ++++FFK+ R Sbjct: 127 KDIEIISGIKKDVCESLLKEFFKDMR 152 >gi|56707349|ref|YP_169245.1| zinc-binding domain-containing protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110669819|ref|YP_666376.1| zinc-binding domain-containing protein [Francisella tularensis subsp. tularensis FSC198] gi|56603841|emb|CAG44817.1| Zinc-binding domain protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320152|emb|CAL08200.1| Zinc-binding domain protein [Francisella tularensis subsp. tularensis FSC198] gi|282158481|gb|ADA77872.1| Zinc-binding domain protein [Francisella tularensis subsp. tularensis NE061598] Length = 153 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 1/148 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A ++A A E+P+GAV V +++II + N+ L D TAHAEIL +R Sbjct: 6 DQDIFFMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLRS 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L LYVTLEPC MC + AR+ L Y + + G + + + Sbjct: 66 AALKLGNYRLVNTKLYVTLEPCIMCLGGLIQARVPELVYACDDSRVGAF-SREKLHHNKN 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ + G+ ++++DFFK+RR Sbjct: 125 INHNLGVTAGVMADECSKLLKDFFKQRR 152 >gi|164686927|ref|ZP_02210955.1| hypothetical protein CLOBAR_00529 [Clostridium bartlettii DSM 16795] gi|164604030|gb|EDQ97495.1| hypothetical protein CLOBAR_00529 [Clostridium bartlettii DSM 16795] Length = 150 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 56/144 (38%), Positives = 77/144 (53%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ A+ EA+ A + E P+GAV V +++II R N L+D TAHAE+LAI+ Sbjct: 5 FFMNEAINEAKKAYDKGETPIGAVIVKDSEIIGRGHNLTETLRDSTAHAEMLAIKDASET 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + DLYVT+EPC MC+ AI +RI+ + G + K IE F Sbjct: 65 LGGWRLTDCDLYVTMEPCIMCSGAIVNSRIKNIIIGTKHIKNANIEKQHTFKMEYFKDSR 124 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI E I+Q FFK+ R Sbjct: 125 VNVEFGIMEDECSIILQRFFKDLR 148 >gi|145219369|ref|YP_001130078.1| tRNA-adenosine deaminase [Prosthecochloris vibrioformis DSM 265] gi|145205533|gb|ABP36576.1| tRNA-adenosine deaminase [Chlorobium phaeovibrioides DSM 265] Length = 153 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 54/150 (36%), Positives = 79/150 (52%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59 M + M A EA A E+PVGAV + ++ + N+ L D TAHAE++A+ Sbjct: 1 MMDFSYCMELAFREALKAFESREVPVGAVVLDGGGHVVGKGYNQVEALCDATAHAEMIAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L + L + L VT+EPC MCA AI A++ R+ +GA + K G + Sbjct: 61 TSAMATLGTKYLQDCTLAVTMEPCPMCAGAIVNAKVGRVVFGAYDAKMGASGSVLNVTGC 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE++ GI E R + ++QDFFKE R Sbjct: 121 RPLNHQPEVFGGIMEGRCQGLLQDFFKELR 150 >gi|225352824|ref|ZP_03743847.1| hypothetical protein BIFPSEUDO_04457 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156335|gb|EEG69904.1| hypothetical protein BIFPSEUDO_04457 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 149 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+E A+ AA E+PVGAV + +I N D AHAE+ A+ R L Sbjct: 7 MELAIELAREAAAEGEVPVGAVVLDAGGAVIGSGRNLREAHADPLAHAEVKAMTQAARSL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPC MCA A + R+ +GA + K G + H P Sbjct: 67 GTWNLADCTLIVTLEPCPMCAGACLQTHVGRIVFGAWDAKLGACGSIWDIPRDPHVGHVP 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E +++ DFF +R Sbjct: 127 EVIGGVRESECARLMTDFFAGKR 149 >gi|319953292|ref|YP_004164559.1| cmp/dcmp deaminase zinc-binding protein [Cellulophaga algicola DSM 14237] gi|319421952|gb|ADV49061.1| CMP/dCMP deaminase zinc-binding protein [Cellulophaga algicola DSM 14237] Length = 149 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL+EA A + E+PVGA+ V+ ++II+RA N +L DVTAHAE+ AI Sbjct: 6 DDTYYMKKALQEAAMAFEKGEVPVGAIIVIQDRIIARAHNLTEQLNDVTAHAEMQAITAA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L + LYVTLEPC MCA A+ ++I ++ Y A + + G GT T Sbjct: 66 ANFLGGKYLKDCTLYVTLEPCQMCAGALYWSQISKIVYAAKDVERGCGAMGT------TL 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H +I G+ + +++ FF ++R Sbjct: 120 HPKTKIVGGVLAAEASAMLKRFFSQKR 146 >gi|255693703|ref|ZP_05417378.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides finegoldii DSM 17565] gi|260620520|gb|EEX43391.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides finegoldii DSM 17565] Length = 145 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 81/149 (54%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM AL EA AA R E+PVGAV V +II+RA N L DVTAHAE+ AI Sbjct: 1 MLDDTYFMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y ++ Sbjct: 61 AAANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEKRG-----YQKYAVS 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ ++++FF +R Sbjct: 116 ALHPKTVVVKGLLADECAALMKNFFAAKR 144 >gi|257789865|ref|YP_003180471.1| CMP/dCMP deaminase zinc-binding [Eggerthella lenta DSM 2243] gi|317489321|ref|ZP_07947835.1| cytidine and deoxycytidylate deaminase zinc-binding region [Eggerthella sp. 1_3_56FAA] gi|325829718|ref|ZP_08163181.1| cytidine and deoxycytidylate deaminase zinc-binding region [Eggerthella sp. HGA1] gi|257473762|gb|ACV54082.1| CMP/dCMP deaminase zinc-binding [Eggerthella lenta DSM 2243] gi|316911566|gb|EFV33161.1| cytidine and deoxycytidylate deaminase zinc-binding region [Eggerthella sp. 1_3_56FAA] gi|325488213|gb|EGC90645.1| cytidine and deoxycytidylate deaminase zinc-binding region [Eggerthella sp. HGA1] Length = 167 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 12/159 (7%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL----NN--------KIISRAGNRNRELKDV 50 +M A+EEA+ A +E+P+GAV V ++I+RA N +D Sbjct: 2 TDEDYMRMAIEEARRAEELDEVPIGAVVVYEPIDPGTRRPLAEPQVIARACNLRETTQDP 61 Query: 51 TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 HAE +A++ L L +YVTLEPC MCA + AR+ R YGA++PK G + Sbjct: 62 AGHAEFIALKQAAERLGVWRLTGCTVYVTLEPCVMCAGLMHQARVDRCVYGAADPKAGAL 121 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ E G+ ++++ FF +R Sbjct: 122 GTLYAVNADERLNHTFEAVSGVLGDECAELLRSFFARKR 160 >gi|329961864|ref|ZP_08299878.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides fluxus YIT 12057] gi|328531304|gb|EGF58148.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides fluxus YIT 12057] Length = 144 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 79/147 (53%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL EAQ A R E+PVGAV V ++II+RA N L DVTAHAE+ AI Sbjct: 2 DDSYYMKQALLEAQKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y Sbjct: 62 ASTLGGKYLNECALYVTVEPCVMCAGAIAWAQTGKLVFGAEDEKRG-----YQRYAPQAL 116 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ ++++FF +R Sbjct: 117 HPKTMVVKGVLADECAALMKNFFAAKR 143 >gi|294625308|ref|ZP_06703945.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665062|ref|ZP_06730368.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600377|gb|EFF44477.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605180|gb|EFF48525.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 169 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 76/148 (51%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNA-ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL+ A+ A +EIPVGAV V ++ N N D +AHAEI+A+R Sbjct: 15 DVHWMQHALQLAERAERDYDEIPVGAVLVDAQGNVLGEGWNFNIASHDPSAHAEIVAMRE 74 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L+ L LYVTLEPC MCA A+ ARI R+ + AS+PK G + Sbjct: 75 AGRRLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 134 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + + ++F+ +R Sbjct: 135 HNHRVQVSGGVLAAEASLRLTNYFRAKR 162 >gi|206603205|gb|EDZ39685.1| Putative zinc-binding cytidine/deoxycytidylate deaminase [Leptospirillum sp. Group II '5-way CG'] Length = 162 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ AL EA+ A +NEIP+GA+ V N ++ R N+ D TAHAEI+A+R Sbjct: 12 DERWMTEALSEAKTAMKKNEIPIGALLVDGNGTVLGRGHNQRIGSMDPTAHAEIVALRSS 71 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + LP LYVT+EPC MC A+ AR+ + +G P+ G + Sbjct: 72 GLHVKNYRLPGTTLYVTVEPCLMCFGALLEARVETVVFGIREPRWGVTGSLYDLQNDPRF 131 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ + +++ FF+ RR Sbjct: 132 PHRIRVREGVLSHACQDLLRSFFQSRR 158 >gi|24374802|ref|NP_718845.1| cytidine/deoxycytidylate deaminase family protein [Shewanella oneidensis MR-1] gi|24349479|gb|AAN56289.1|AE015766_5 cytidine/deoxycytidylate deaminase family protein [Shewanella oneidensis MR-1] Length = 194 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 71/148 (47%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +M A+ A+ A E+PVGAV V + I+ N + D AHAEIL +R Sbjct: 32 KVDEHWMRVAMAMAEKAEAEGEVPVGAVLVKDGLQIATGYNLSISQHDPCAHAEILCLRA 91 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + L + LYVTLEPC MCA A+ +RI R+ +GA + K G Sbjct: 92 AGQTVENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVLNLLQHPA 151 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ Q + FFK RR Sbjct: 152 FNHQVEVTSGVLAQDCADQLSRFFKRRR 179 >gi|319941641|ref|ZP_08015965.1| cytosine deaminase [Sutterella wadsworthensis 3_1_45B] gi|319804871|gb|EFW01725.1| cytosine deaminase [Sutterella wadsworthensis 3_1_45B] Length = 328 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 63/148 (42%), Positives = 86/148 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM ALEEAQ A + EIPVGAV V + K+I+R GN D TAHAEI+A+R Sbjct: 161 EADRSFMRMALEEAQEAGMAGEIPVGAVVVADGKVIARGGNETLRSGDPTAHAEIVALRA 220 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L+ L LYVTLEPC MCA AI+ AR RR+ YGA + + G +E + + + Sbjct: 221 AAAALANHRLTNTTLYVTLEPCPMCAGAIAEARCRRIVYGAGDSRRGALEGAFRLFDIPG 280 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P + G+ +++ DFF +RR Sbjct: 281 VNHRPLVTGGVLALEGEKLLTDFFAKRR 308 >gi|325928669|ref|ZP_08189845.1| tRNA-adenosine deaminase [Xanthomonas perforans 91-118] gi|325540965|gb|EGD12531.1| tRNA-adenosine deaminase [Xanthomonas perforans 91-118] Length = 171 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNA-ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL+ A+ A +EIPVGA+ V ++ N N D +AHAEI+A+R Sbjct: 17 DEHWMRHALQLAERAERDYDEIPVGALLVDAQGNVLGEGWNFNIASHDPSAHAEIVAMRE 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L+ L LYVTLEPC MCA A+ ARI R+ + AS+PK G + Sbjct: 77 AGRRLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + + ++F+ +R Sbjct: 137 HNHRVQVCGGVLAAEASLRLTNYFRAKR 164 >gi|291279752|ref|YP_003496587.1| CMP/dCMP deaminase zinc-binding protein [Deferribacter desulfuricans SSM1] gi|290754454|dbj|BAI80831.1| CMP/dCMP deaminase, zinc-binding protein [Deferribacter desulfuricans SSM1] Length = 151 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 50/146 (34%), Positives = 80/146 (54%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM A+ EA + E+PVGAV V ++++IS N + K+ HAE++AI Sbjct: 6 DKYFMKLAIAEAYKSFEEGEVPVGAVVVRDDEVISYGRNIKGKNKNALLHAEMVAIHKSV 65 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 ++L L E LYVT EPC MCA AI RI+++ +GA PK GG+ + + + + Sbjct: 66 KMLDDWRLNECTLYVTCEPCVMCAGAILHCRIKKVIFGAFEPKFGGVVSNLRVFDTPFFN 125 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H G+ + +++++FFK+ R Sbjct: 126 HKVRYEFGLFSEEISKMMKNFFKQFR 151 >gi|253572102|ref|ZP_04849506.1| cytosine deaminase [Bacteroides sp. 1_1_6] gi|298383486|ref|ZP_06993047.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 1_1_14] gi|251838282|gb|EES66369.1| cytosine deaminase [Bacteroides sp. 1_1_6] gi|298263090|gb|EFI05953.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 1_1_14] Length = 146 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 61/147 (41%), Positives = 78/147 (53%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL EA AA R E+PVGAV V +II+RA N L DVTAHAE+ AI Sbjct: 4 DDTYFMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAITAA 63 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y Sbjct: 64 ANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDDKRG-----YQRYAAQAL 118 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI +++DFF +R Sbjct: 119 HPKTVVVKGILADECATLMKDFFASKR 145 >gi|182437330|ref|YP_001825049.1| putative deaminase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326777951|ref|ZP_08237216.1| CMP/dCMP deaminase zinc-binding [Streptomyces cf. griseus XylebKG-1] gi|178465846|dbj|BAG20366.1| putative deaminase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326658284|gb|EGE43130.1| CMP/dCMP deaminase zinc-binding [Streptomyces cf. griseus XylebKG-1] Length = 142 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 52/140 (37%), Positives = 72/140 (51%), Gaps = 1/140 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA AA ++PVGAV + + ++ A N D TAHAEILA+R Sbjct: 1 MRRALAEAGRAASAGDVPVGAVVLGPDGTGLATAHNEREATGDPTAHAEILALRRAAEAH 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPCTMCA A+ +RI R+ YGA + K G + +H P Sbjct: 61 GEWRLTGCTLVVTLEPCTMCAGALVQSRIARVVYGARDEKAGAAGSLWDVVRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFK 146 E+ G+ E+ + + FF+ Sbjct: 121 EVIAGVLERECAEQLTAFFR 140 >gi|46203751|ref|ZP_00051027.2| COG0590: Cytosine/adenosine deaminases [Magnetospirillum magnetotacticum MS-1] Length = 152 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 72/128 (56%), Positives = 88/128 (68%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V + ++ AGNR R L D TAHAEILAIR C L E L DLYVTLE Sbjct: 19 GEVPVGAVVVRDGVVLGVAGNRPRALSDPTAHAEILAIRAACTALQDERLTGCDLYVTLE 78 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AIS ARIRRLYY AS+PKGGG+E+G + + TCHH+PE+Y G + ++ Sbjct: 79 PCPMCAGAISFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFRAGEAAGLL 138 Query: 142 QDFFKERR 149 ++FF RR Sbjct: 139 REFFAGRR 146 >gi|15893208|ref|NP_360922.1| cytosine deaminase [Rickettsia conorii str. Malish 7] gi|15620423|gb|AAL03823.1| cytosine deaminase [Rickettsia conorii str. Malish 7] Length = 168 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 66/148 (44%), Positives = 97/148 (65%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL++A+ A +NE+PVGAV V + KII+ N E + HAEI+AI Sbjct: 12 NNFFMEQALKQAKIAFDKNEVPVGAVVVDRLHQKIIASTHNNTEEKNNALYHAEIIAINE 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+ +++ + Sbjct: 72 ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGVVESNLRYFNSSA 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C H PEIY GI + S ++++FFK R Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159 >gi|282891324|ref|ZP_06299826.1| hypothetical protein pah_c050o112 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498821|gb|EFB41138.1| hypothetical protein pah_c050o112 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 176 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL++A A E+PVGA+ V KII+R N+ L+D TAHAE+L I Sbjct: 12 DEDEKFMLEALKQAWKAFQAKEVPVGAILVHEGKIIARGYNQVELLRDATAHAEVLCITA 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G LS L + LY T+EPC MCA A+ L+R+ L +GA + + G + + Sbjct: 72 GEAALSNWRLSQCKLYCTIEPCAMCAGAMLLSRVEELIWGAPDIRHGANGSWVNLLNIPH 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ GI + +++ FF+ RR Sbjct: 132 PTHQIKVKSGILKDPCALLMKQFFQIRR 159 >gi|153808687|ref|ZP_01961355.1| hypothetical protein BACCAC_02986 [Bacteroides caccae ATCC 43185] gi|149128513|gb|EDM19731.1| hypothetical protein BACCAC_02986 [Bacteroides caccae ATCC 43185] Length = 145 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM AL EA AA R E+PVGAV V +II+RA N L DVTAHAE+ AI Sbjct: 1 MLDDTYFMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y Sbjct: 61 AAANVLGGKYLSECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEKRG-----YQRYAAD 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI ++++FF +R Sbjct: 116 ALHPKTVVVKGILADECAALMREFFAAKR 144 >gi|313826960|gb|EFS64674.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL063PA1] Length = 149 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 55/143 (38%), Positives = 80/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL+ A+ AA R ++P+GAV + N +++S AGN D TAHAE+LAIR Sbjct: 1 MTQALDVARRAATRGDVPIGAVILGANGEVLSEAGNERERTGDPTAHAEVLAIRRAAEAR 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPCTMCA I ARI R+ +GA +PK G + + H P Sbjct: 61 DGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDPKAGAVSSLFDAMRDPRLPHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + S ++++FF R Sbjct: 121 KVVTGVMAEESSALLREFFDGHR 143 >gi|319403672|emb|CBI77257.1| Cytosine/adenosine deaminase [Bartonella rochalimae ATCC BAA-1498] Length = 150 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 76/142 (53%), Positives = 97/142 (68%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ+A ++EIPVGAV II+RAGN + D T HAE+ IR+ C+I Sbjct: 6 MEIALLEAQSAKKQDEIPVGAVITHGQTIIARAGNYIKNPHDPTGHAEMRVIRIACQIFK 65 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E +PE D+YVTLEPC MCAAAIS ARIR LYY S+ KGG IE+G +FY TCHH P Sbjct: 66 SERIPECDIYVTLEPCAMCAAAISFARIRNLYYATSDSKGGAIEHGPRFYQQPTCHHRPN 125 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G E+ + Q+++DFF ++R Sbjct: 126 VYSGFKEKEASQLLKDFFIQKR 147 >gi|29347644|ref|NP_811147.1| putative cytosine/adenosine deaminase [Bacteroides thetaiotaomicron VPI-5482] gi|29339545|gb|AAO77341.1| putative cytosine/adenosine deaminase [Bacteroides thetaiotaomicron VPI-5482] Length = 147 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 61/147 (41%), Positives = 78/147 (53%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL EA AA R E+PVGAV V +II+RA N L DVTAHAE+ AI Sbjct: 5 DDTYFMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAITAA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y Sbjct: 65 ANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDDKRG-----YQRYAAQAL 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI +++DFF +R Sbjct: 120 HPKTVVVKGILADECATLMKDFFASKR 146 >gi|307565958|ref|ZP_07628417.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella amnii CRIS 21A-A] gi|307345386|gb|EFN90764.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella amnii CRIS 21A-A] Length = 156 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 83/149 (55%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +KK +M ALEEA+ A EIP+GA+ V ++II+RA N L DVTAHAE+ AI Sbjct: 13 IKKDLYYMQFALEEAKQAYKEKEIPIGAIIVCKDRIIARAHNLTERLHDVTAHAEMQAIT 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + L LYVT+EPC MCA A+ ++++R+ +G + K G Y Sbjct: 73 IAANELGGKYLEGCTLYVTVEPCIMCAGALGWSQMKRIVFGCIDDKRG-----YHTYAPK 127 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H I GI E ++++ FFKERR Sbjct: 128 ALHPKANIIGGIMENECKELMLRFFKERR 156 >gi|297623312|ref|YP_003704746.1| tRNA(Ile)-lysidine synthetase [Truepera radiovictrix DSM 17093] gi|297164492|gb|ADI14203.1| tRNA(Ile)-lysidine synthetase [Truepera radiovictrix DSM 17093] Length = 556 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 73/148 (49%), Gaps = 1/148 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M AL EA+ AA R E+PVGAV V ++ R N RE D +AHAE+ AIR Sbjct: 401 DEDARWMRLALNEARRAAERGELPVGAVVVRGGAVLGRGHNTTRESGDPSAHAELHAIRQ 460 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L L+VTLEPC MC A+ A + R+ YGA+N + G + Sbjct: 461 AAAALGDWRLAGCTLFVTLEPCPMCFGALLSAHLPRVVYGATNAREGALGGVADLQQHPW 520 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + G+ + ++ FF+ RR Sbjct: 521 -KRTVAVRGGVLAAEAGALLTAFFRARR 547 >gi|270159636|ref|ZP_06188292.1| tRNA-specific adenosine deaminase [Legionella longbeachae D-4968] gi|289165578|ref|YP_003455716.1| tRNA-specific adenosine deaminase [Legionella longbeachae NSW150] gi|269987975|gb|EEZ94230.1| tRNA-specific adenosine deaminase [Legionella longbeachae D-4968] gi|288858751|emb|CBJ12656.1| tRNA-specific adenosine deaminase [Legionella longbeachae NSW150] Length = 149 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A E+A A E+PVGA+ V N N+++ N ++ D ++HAEI AIR Sbjct: 2 NDQYWMRQAYEQALLAQTEGEVPVGAILVSNENQLLGAGRNLIQKSHDPSSHAEIQAIRQ 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L + LYVTLEPC MCA + ARI RL + + K G + Sbjct: 62 ASQRLQNHRLLDTTLYVTLEPCAMCAGLMVHARISRLVFATRDFKSGAAGSVYNLLQGYP 121 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I GI + + ++ +FFK R Sbjct: 122 LNHKVQIDEGIMQAQCASLLSEFFKACR 149 >gi|91215472|ref|ZP_01252443.1| putative cytosine/adenosine deaminase [Psychroflexus torquis ATCC 700755] gi|91186424|gb|EAS72796.1| putative cytosine/adenosine deaminase [Psychroflexus torquis ATCC 700755] Length = 149 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 84/147 (57%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM AL+EAQ A + EIPVGAV NN+II+++ N +L DVTAHAE+ AI Sbjct: 6 DDHYFMKKALQEAQQAFDKGEIPVGAVVTHNNQIIAKSHNLTEQLTDVTAHAEMQAITAA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L LYVTLEPC MCA A+ +++ RL + A + G GTQ Sbjct: 66 ANHIGGKYLRGCTLYVTLEPCQMCAGALYWSQLSRLVFAAPDEGRGYRTLGTQL------ 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ GI E+ + ++++ FF ++R Sbjct: 120 HPKTKVDHGILEEEASRLLKAFFIQKR 146 >gi|332973009|gb|EGK10948.1| cytidine/deoxycytidylate deaminase [Psychrobacter sp. 1501(2011)] Length = 207 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 58/143 (40%), Positives = 77/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALE AQ A + E+PVGAV V II N+ D TAHAEI+A+R C L Sbjct: 57 MQAALELAQQGASKEEVPVGAVLVQEGNIIGEGFNQPILTCDPTAHAEIVALRSACSALE 116 Query: 68 QEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP LYVTLEPCTMC A+ AR+ RL + P+ G + + + +H Sbjct: 117 NYRLPANTTLYVTLEPCTMCLGALIHARLSRLVFATQEPRAGMVGSQLNLVEMDFYNHKI 176 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + S+QI++ FFK RR Sbjct: 177 AVNYGLLQADSQQILKSFFKARR 199 >gi|309812017|ref|ZP_07705783.1| cytidine and deoxycytidylate deaminase zinc-binding region [Dermacoccus sp. Ellin185] gi|308434075|gb|EFP57941.1| cytidine and deoxycytidylate deaminase zinc-binding region [Dermacoccus sp. Ellin185] Length = 159 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 1/146 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + +M ALE A+ ++PVGA+ V + ++I N D T HAEI+A+R Sbjct: 14 DAWMGRALELAREVGAAGDVPVGALVVDPDGEVIGVGANLREVDGDPTGHAEIVAMRRAA 73 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L L VTLEPC MCA A AR+ R+ GA + K G + Sbjct: 74 ASRGGWRLDGCTLVVTLEPCLMCAGAAVQARLPRIVLGAWDRKAGACGGLWDVVRDSRST 133 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI E ++++FF RR Sbjct: 134 HRIEVVGGIREDECSAVLKEFFATRR 159 >gi|124516363|gb|EAY57871.1| putative zinc-binding cytidine/deoxycytidylate deaminase [Leptospirillum rubarum] Length = 164 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ AL EA+ A +NEIP+GA+ V N ++ R N+ D TAHAEI+A+R Sbjct: 12 DERWMTEALSEAKTAMEKNEIPIGAILVDANGTVLGRGHNQRVGSTDPTAHAEIVALRTS 71 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + LP LYVT+EPC MC A+ AR+ + +G P+ G + Sbjct: 72 GLHVKNYRLPGTTLYVTVEPCLMCFGALLEARVETVVFGIREPRWGVTGSLYDLQNDPRF 131 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ ++Q FF+ RR Sbjct: 132 PHRIRVREGVLSHACLDLLQSFFQSRR 158 >gi|119386848|ref|YP_917903.1| CMP/dCMP deaminase, zinc-binding [Paracoccus denitrificans PD1222] gi|119377443|gb|ABL72207.1| CMP/dCMP deaminase, zinc-binding protein [Paracoccus denitrificans PD1222] Length = 149 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 81/143 (56%), Positives = 103/143 (72%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA+ AA R E+PVGAV V + +++RAGNR RE++D TAHAEILAIR C L Sbjct: 7 MPTALDEARAAARRGEVPVGAVLVGADGAVLARAGNRTREMRDPTAHAEILAIRAACAHL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E LP L+VTLEPC MCAAAIS ARI LYYGA +P+ GG+ +G + + CHH P Sbjct: 67 GSERLPGARLWVTLEPCPMCAAAISAARIEMLYYGAEDPRMGGVRHGARVFDHPQCHHRP 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EI GIS + SR+++Q+FF+ERR Sbjct: 127 EIIDGISAEESRRLLQEFFRERR 149 >gi|220926362|ref|YP_002501664.1| CMP/dCMP deaminase [Methylobacterium nodulans ORS 2060] gi|219950969|gb|ACL61361.1| CMP/dCMP deaminase zinc-binding [Methylobacterium nodulans ORS 2060] Length = 158 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 71/128 (55%), Positives = 94/128 (73%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV + +++ AGNR R L+D TAHAEILAIR C+ + E L DLYVTLE Sbjct: 30 GEVPVGAVVMRGGTVLAVAGNRPRALRDPTAHAEILAIRAACQAIGDERLAGCDLYVTLE 89 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AIS ARIRRLY+ A++PKGG +ENG + ++ TCHH+PE+Y G+ E + ++ Sbjct: 90 PCAMCAGAISFARIRRLYFAAADPKGGAVENGPRLFSQPTCHHAPEVYGGLREAEAAALL 149 Query: 142 QDFFKERR 149 +DFF+ERR Sbjct: 150 RDFFRERR 157 >gi|75908361|ref|YP_322657.1| tRNA-adenosine deaminase [Anabaena variabilis ATCC 29413] gi|75702086|gb|ABA21762.1| tRNA-adenosine deaminase [Anabaena variabilis ATCC 29413] Length = 147 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 63/143 (44%), Positives = 79/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 MS ALE A+ A EIPVGAV + +I+ NR +D TAHAEI+A+R RIL Sbjct: 1 MSHALELAKVAGDAGEIPVGAVITDASGNLIAEGENRKERDQDPTAHAEIVALRAATRIL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LYVTLEPC MCA AI AR+ +L YG + K G I A +H Sbjct: 61 QTWRLHECTLYVTLEPCPMCAGAIIQARLGKLVYGVDDTKTGAIRTVLNIPDSAASNHRL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI E RQ +Q++F RR Sbjct: 121 QVIGGILESACRQHLQNWFINRR 143 >gi|188583522|ref|YP_001926967.1| CMP/dCMP deaminase zinc-binding [Methylobacterium populi BJ001] gi|179347020|gb|ACB82432.1| CMP/dCMP deaminase zinc-binding [Methylobacterium populi BJ001] Length = 147 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 72/128 (56%), Positives = 90/128 (70%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V + +++ A NR R L D TAHAEILAIR C L E L DLYVTLE Sbjct: 19 GEVPVGAVVVRDGAVLAVASNRPRALSDPTAHAEILAIRAACAALRDERLTGCDLYVTLE 78 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI+ ARIRRLYY AS+PKGGG+E+G + + TCHH+PE+Y G E + ++ Sbjct: 79 PCPMCAGAIAFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFREGEAAGLL 138 Query: 142 QDFFKERR 149 +DFF +RR Sbjct: 139 RDFFSQRR 146 >gi|312113039|ref|YP_004010635.1| CMP/dCMP deaminase zinc-binding protein [Rhodomicrobium vannielii ATCC 17100] gi|311218168|gb|ADP69536.1| CMP/dCMP deaminase zinc-binding protein [Rhodomicrobium vannielii ATCC 17100] Length = 157 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 77/143 (53%), Positives = 97/143 (67%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA+ AA E PVGAV V + I R N ++D HAE+ AIR C + Sbjct: 1 MQEALIEAERAAALGETPVGAVVVAPDGSIAGRGHNLVISVRDPFGHAEMRAIRQACEAV 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E LP DLYVTLEPCTMCAAAIS ARIRRLY+GA + KGG +ENG +F++ ATCHH+P Sbjct: 61 QSERLPGYDLYVTLEPCTMCAAAISFARIRRLYFGAWDEKGGAVENGVRFFSAATCHHAP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EIY GI++ + +++ FF+ERR Sbjct: 121 EIYGGIAQAEAAALLRAFFQERR 143 >gi|302185724|ref|ZP_07262397.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. syringae 642] Length = 169 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM AL A AL E+PVGAV V N +II R N D +AHAE++AIR Sbjct: 10 SKDQYFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRQ 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ A Sbjct: 70 AAKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 130 LNHRVLFEGGVLGEECGTMLSEFFRMRR 157 >gi|313206574|ref|YP_004045751.1| cmp/dcmp deaminase zinc-binding protein [Riemerella anatipestifer DSM 15868] gi|312445890|gb|ADQ82245.1| CMP/dCMP deaminase zinc-binding protein [Riemerella anatipestifer DSM 15868] gi|315023430|gb|EFT36438.1| tRNA-specific adenosine-34 deaminase [Riemerella anatipestifer RA-YM] gi|325335978|gb|ADZ12252.1| Cytosine/adenosine deaminase [Riemerella anatipestifer RA-GD] Length = 143 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 6/149 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM A +EA A ++E+PVG V V N ++I+R N L DVTAHAE+ +I Sbjct: 1 MFTDEYFMRMAFQEALIAFEKDEVPVGCVIVHNERVIARGYNLTETLNDVTAHAEMQSIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L + +YVTLEPCTMCA A+ ++I R+ GA + G ++ Sbjct: 61 SAANALGGKYLKDCTMYVTLEPCTMCAGALFWSQISRVVIGARDEHRGFLKQNIN----- 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H +I GI E R ++++FFK +R Sbjct: 116 -LHPKTQISIGIMEDDCRNLVKEFFKSKR 143 >gi|289426038|ref|ZP_06427785.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes SK187] gi|289427970|ref|ZP_06429674.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes J165] gi|295131701|ref|YP_003582364.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes SK137] gi|289153581|gb|EFD02295.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes SK187] gi|289158853|gb|EFD07053.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes J165] gi|291375889|gb|ADD99743.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes SK137] Length = 160 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL+ A+ AA ++P+GAV + N +++S AGN D TAHAE+LAIR Sbjct: 12 MTQALDVARRAATWGDVPIGAVILGANGEVLSEAGNERERTGDPTAHAEVLAIRRAAEAR 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPCTMCA I ARI R+ +GA +PK G + + H P Sbjct: 72 DGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDPKAGAVSSLFDAMRDPRLPHRP 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + S ++++FF R Sbjct: 132 KVVTGVMAEESSALLREFFDGHR 154 >gi|89257159|ref|YP_514521.1| zinc-binding domain-containing protein [Francisella tularensis subsp. holarctica LVS] gi|115315498|ref|YP_764221.1| cytosine/adenosine deaminase [Francisella tularensis subsp. holarctica OSU18] gi|134302708|ref|YP_001122676.1| cytidine and deoxycytidylate deaminase zinc-binding domain-containing protein [Francisella tularensis subsp. tularensis WY96-3418] gi|156503384|ref|YP_001429449.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|187932249|ref|YP_001892234.1| zinc-binding protein [Francisella tularensis subsp. mediasiatica FSC147] gi|290953357|ref|ZP_06557978.1| zinc-binding protein [Francisella tularensis subsp. holarctica URFT1] gi|295313404|ref|ZP_06804011.1| zinc-binding protein [Francisella tularensis subsp. holarctica URFT1] gi|89144990|emb|CAJ80350.1| Zinc-binding domain protein [Francisella tularensis subsp. holarctica LVS] gi|115130397|gb|ABI83584.1| probable cytosine/adenosine deaminase [Francisella tularensis subsp. holarctica OSU18] gi|134050485|gb|ABO47556.1| Cytidine and deoxycytidylate deaminase Zinc-binding domain protein [Francisella tularensis subsp. tularensis WY96-3418] gi|156253987|gb|ABU62493.1| cytidine/deoxycytidylate deaminase, zinc-binding domain protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|187713158|gb|ACD31455.1| zinc-binding protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 153 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 1/148 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A ++A A E+P+GAV V +++II + N+ L D TAHAEIL +R Sbjct: 6 DQDIFFMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLRS 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L LYVTLEPC MC + AR+ L Y + + G + + + Sbjct: 66 AALKLGNYRLVNTKLYVTLEPCIMCLGGLIQARVPELVYACDDSRVGAF-SREKLHHNKN 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ + G+ ++++DFFK+RR Sbjct: 125 INHNLGVTAGVMADECGKLLKDFFKQRR 152 >gi|282854964|ref|ZP_06264298.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes J139] gi|282582110|gb|EFB87493.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes J139] gi|314922049|gb|EFS85880.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL001PA1] gi|314965899|gb|EFT09998.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL082PA2] gi|314980659|gb|EFT24753.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL110PA3] gi|315090999|gb|EFT62975.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL110PA4] gi|315095126|gb|EFT67102.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL060PA1] gi|315105358|gb|EFT77334.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL050PA2] gi|327328755|gb|EGE70515.1| tRNA-specific adenosine deaminase [Propionibacterium acnes HL103PA1] Length = 156 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 52/143 (36%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL+ A+ AA ++P+GAV + + +++S AGN D TAHAE+LAIR Sbjct: 8 MTQALDVARRAATWGDVPIGAVILGADGEVLSEAGNERERTGDPTAHAEVLAIRRAAEAR 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPCTMCA I ARI R+ +GA + K G + + H P Sbjct: 68 DGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDSKAGAVSSLFDVMRDPRLPHRP 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + S ++++FF R Sbjct: 128 KVVTGVMAEESSALLREFFDGHR 150 >gi|260061052|ref|YP_003194132.1| putative cytosine/adenosine deaminase [Robiginitalea biformata HTCC2501] gi|88785184|gb|EAR16353.1| putative cytosine/adenosine deaminase [Robiginitalea biformata HTCC2501] Length = 149 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 82/147 (55%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL+EA+ A E+PVGAV + +++I+RA N +L DVTAHAE+ AI Sbjct: 6 DDAFFMRKALQEAEAAFDLGEVPVGAVITVRDRVIARAHNLTEKLNDVTAHAEMQAITAA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L + LYVTLEPC MCA A+ +++ R+ YGA +P+ G G Sbjct: 66 ANFLGGKYLTDCTLYVTLEPCQMCAGALYWSQVSRVVYGAPDPQRGFTAMG------GKL 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + PGI E + +++ FF ERR Sbjct: 120 HPRTLVTPGILEAEAAALLKRFFIERR 146 >gi|160885114|ref|ZP_02066117.1| hypothetical protein BACOVA_03112 [Bacteroides ovatus ATCC 8483] gi|237718265|ref|ZP_04548746.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|260174220|ref|ZP_05760632.1| putative cytosine/adenosine deaminase [Bacteroides sp. D2] gi|293368778|ref|ZP_06615382.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides ovatus SD CMC 3f] gi|299147814|ref|ZP_07040877.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 3_1_23] gi|315922489|ref|ZP_07918729.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156109464|gb|EDO11209.1| hypothetical protein BACOVA_03112 [Bacteroides ovatus ATCC 8483] gi|229452449|gb|EEO58240.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|292636083|gb|EFF54571.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides ovatus SD CMC 3f] gi|298513997|gb|EFI37883.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 3_1_23] gi|313696364|gb|EFS33199.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 145 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 80/149 (53%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM AL EA AA R E+PVGAV V +II+RA N L DVTAHAE+ AI Sbjct: 1 MLDDIYFMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y + Sbjct: 61 AAANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEKRG-----YQKYAGS 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ ++++FF +R Sbjct: 116 ALHPKTVVVKGVMADECATLMKEFFAAKR 144 >gi|291287100|ref|YP_003503916.1| CMP/dCMP deaminase zinc-binding protein [Denitrovibrio acetiphilus DSM 12809] gi|290884260|gb|ADD67960.1| CMP/dCMP deaminase zinc-binding protein [Denitrovibrio acetiphilus DSM 12809] Length = 158 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM+ A++EA+ AA + E+P+GAV V +I R N+ K HAEI+AI Sbjct: 6 EQDIFFMNEAVKEAEGAAAKGEVPIGAVVVSEGAVIGRGSNKKNSGKSALNHAEIIAIED 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L E LYVTLEPC MCA AI ARIR + +G + PK GG+ + + + + Sbjct: 66 ASSKIGDWRLDECTLYVTLEPCLMCAGAIIHARIRNVIFGTTEPKFGGVISLARTFDIDG 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ +++ FFKE R Sbjct: 126 LNHKVSYKGGLHSDEISAMMKQFFKEVR 153 >gi|325981113|ref|YP_004293515.1| CMP/dCMP deaminase zinc-binding protein [Nitrosomonas sp. AL212] gi|325530632|gb|ADZ25353.1| CMP/dCMP deaminase zinc-binding protein [Nitrosomonas sp. AL212] Length = 152 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 55/142 (38%), Positives = 75/142 (52%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALE A A E+PVGAV V + I+ R NR D +AHAEI+A+R ++ Sbjct: 1 MQAALELALQAQECGEVPVGAVVVQHGVIVGRGYNRPISTADPSAHAEIMAMRDAGGHMA 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MC AI ARI+RL Y A++PK G + +H Sbjct: 61 NYRLLDCVLYVTLEPCVMCIGAIFHARIQRLVYAAADPKTGACGSVLDLPAETRLNHHLL 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + GI + +++ FF +RR Sbjct: 121 VDAGIMAPEAGTLLRQFFAQRR 142 >gi|78047755|ref|YP_363930.1| putative cytidine / deoxycytidylate deaminase family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036185|emb|CAJ23876.1| putative cytidine / deoxycytidylate deaminase family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 169 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNA-ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL+ A+ A +EIPVGA+ V ++ N N D +AHAEI+A+R Sbjct: 15 DEHWMRHALQLAERAERDYDEIPVGALLVDAQGNVLGEGWNFNIASHDPSAHAEIVAMRE 74 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L+ L LYVTLEPC MCA A+ ARI R+ + AS+PK G + Sbjct: 75 AGRRLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 134 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + + ++F+ +R Sbjct: 135 HNHRVQVCGGVLAAEASLRLTNYFRAKR 162 >gi|212716206|ref|ZP_03324334.1| hypothetical protein BIFCAT_01122 [Bifidobacterium catenulatum DSM 16992] gi|212660866|gb|EEB21441.1| hypothetical protein BIFCAT_01122 [Bifidobacterium catenulatum DSM 16992] Length = 149 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 49/143 (34%), Positives = 68/143 (47%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+E A+ AA E+PVGAV + +I R N D AHAE+ A+ R L Sbjct: 7 MGLAIELAREAAAEGEVPVGAVVLDAGGAVIGRGRNLREAHADPLAHAEVKAMTQAARSL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPC MCA A + R+ +GA + K G + H P Sbjct: 67 GTWNLADCTLIVTLEPCPMCAGACLQTHVGRIVFGAWDAKLGACGSIWDIPRDPHVGHVP 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E +++ DFF +R Sbjct: 127 EVVGGVCEMECARLMTDFFAGKR 149 >gi|240140677|ref|YP_002965157.1| tRNA-specific adenosine deaminase [Methylobacterium extorquens AM1] gi|240010654|gb|ACS41880.1| tRNA-specific adenosine deaminase [Methylobacterium extorquens AM1] Length = 147 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 72/128 (56%), Positives = 90/128 (70%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGA V + +++ AGNR R L D TAHAEILAIR C L E L DLYVTLE Sbjct: 19 GEVPVGAAVVRDGTVLAVAGNRPRTLCDPTAHAEILAIRAACAALRDERLTGCDLYVTLE 78 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI+ ARIRRLYY AS+PKGGG+E+G + + TCHH+PE+Y G E + ++ Sbjct: 79 PCPMCAGAIAFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFRESEAAGLL 138 Query: 142 QDFFKERR 149 ++FF ERR Sbjct: 139 REFFAERR 146 >gi|146299285|ref|YP_001193876.1| CMP/dCMP deaminase, zinc-binding [Flavobacterium johnsoniae UW101] gi|146153703|gb|ABQ04557.1| CMP/dCMP deaminase, zinc-binding [Flavobacterium johnsoniae UW101] Length = 147 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL+EA+ A + EIPVGA+ V+ +K+I+R+ N L DVTAHAE+ +I Sbjct: 6 TDEYFMKKALQEAEIAYEKGEIPVGAIIVVADKVIARSHNLTELLNDVTAHAEMQSITAA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L + LYVTLEPC MCA A+ ++I ++ +GA + + G I GT+ Sbjct: 66 ANFLGGKYLKDCTLYVTLEPCQMCAGALYWSQISKIVFGARDEQRGFINMGTKL------ 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ + +++ FF ERR Sbjct: 120 HPKTTVVSGVMANEAADLMKRFFLERR 146 >gi|169335874|ref|ZP_02863067.1| hypothetical protein ANASTE_02307 [Anaerofustis stercorihominis DSM 17244] gi|169258612|gb|EDS72578.1| hypothetical protein ANASTE_02307 [Anaerofustis stercorihominis DSM 17244] Length = 145 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 3/145 (2%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N +M A++EA + ++PVGA+ V ++KIIS+A N + D TAHAEILAIR C Sbjct: 2 NTYMLLAVQEALKSGK--DVPVGALIVKDDKIISKAHNEVIKNNDPTAHAEILAIREACS 59 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 IL L +YVTLEPC MCA AI A+I ++ YGA + G + Sbjct: 60 ILDSYNLSGCSIYVTLEPCPMCAGAIINAKIDKVVYGAMDMDYGACGSKYNLLEDNRA-K 118 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 S E+Y GI E + I++DFF++ R Sbjct: 119 SIEVYAGIEEDKCSVILKDFFEQIR 143 >gi|304315578|ref|YP_003850723.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777080|gb|ADL67639.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 143 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 56/142 (39%), Positives = 76/142 (53%), Gaps = 5/142 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M CA++EA + E+PVGAV V + II + N KD T HAEI AI+ C+ + Sbjct: 1 MKCAIDEAVLSLKLGEMPVGAVVVKDGIIIGKGHNLKETEKDATQHAEINAIKDACKNIG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + LYVTLEPC MCA AI +RI+R+Y GA + G F + + Sbjct: 61 DWRLNDASLYVTLEPCPMCAGAIIESRIKRVYIGAESHDSGAAGTVYDF-----LNKKVD 115 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y GI E +++I DFF R Sbjct: 116 VYFGIMEDDCKKLISDFFSRLR 137 >gi|46446282|ref|YP_007647.1| hypothetical protein pc0648 [Candidatus Protochlamydia amoebophila UWE25] gi|46399923|emb|CAF23372.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 166 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL+EA A +E+PVGAV V + II+R N+ LKD TAHAE+L + Sbjct: 11 NDDERFMLEALKEAWKAFKADEVPVGAVLVKDKHIIARGFNQVEMLKDATAHAEMLCLTA 70 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G L L E LY T+EPC+MCA A+ L RI+ L +GA + + G + + Sbjct: 71 GESALDNWRLSETTLYCTVEPCSMCAGAMFLTRIKTLVWGAPDLRHGANGSWVNLFDEIH 130 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H+ EI + + QI++DFF+ +R Sbjct: 131 PTHAIEIRKHVLQNPCAQILKDFFQLQR 158 >gi|86356480|ref|YP_468372.1| cytosine deaminase protein [Rhizobium etli CFN 42] gi|86280582|gb|ABC89645.1| cytosine deaminase protein [Rhizobium etli CFN 42] Length = 143 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 84/140 (60%), Positives = 106/140 (75%) Query: 10 CALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 ALEEA+ A R E+P+GAV V++ +SR+GNR RE DVTAHAEI AIR+ C L QE Sbjct: 1 MALEEARAAGERGEVPIGAVVVIDGIAVSRSGNRTRERNDVTAHAEIAAIRLACEALGQE 60 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 L DLYVTLEPCTMC+AAIS ARIRRLYYGA +PKGG ++NG +FY TCHH+PE+Y Sbjct: 61 RLAGADLYVTLEPCTMCSAAISFARIRRLYYGAEDPKGGAVDNGVRFYAQPTCHHAPEVY 120 Query: 130 PGISEQRSRQIIQDFFKERR 149 G +E +S +I++ FF ++R Sbjct: 121 SGFNEVQSAEILRTFFSQKR 140 >gi|330968078|gb|EGH68338.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. actinidiae str. M302091] Length = 169 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL A ALR E+PVGAV V N +II R N D +AHAE++AIR Sbjct: 10 SNDQHFMREALALAAQGALRGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRD 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ Sbjct: 70 AARALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 130 LNHRVLFEGGVLGEECGAMLSEFFRMRR 157 >gi|71275637|ref|ZP_00651922.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella fastidiosa Dixon] gi|71897819|ref|ZP_00680045.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella fastidiosa Ann-1] gi|71163528|gb|EAO13245.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella fastidiosa Dixon] gi|71732374|gb|EAO34428.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella fastidiosa Ann-1] Length = 203 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 2/149 (1%) Query: 3 KGNVFMSCALEEAQNAALR-NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 + +M AL A AA +EIPVGAV + ++ N N D +AHAEI+A+R Sbjct: 48 EHTHWMRHALTLAHRAATEFDEIPVGAVLISPEGTLLGEGCNYNITSHDPSAHAEIMALR 107 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L +P LYVTLEPC MCA AI ARI L Y A++PK G + Sbjct: 108 AAGHQLRNHRMPGCTLYVTLEPCLMCAMAIIHARIAHLIYAAADPKTGACGSTFDILNDP 167 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +Y G+ + + + + ++F+ +R Sbjct: 168 RHNHHVHVYGGLLAEEASRRLTNYFRTKR 196 >gi|241667466|ref|ZP_04755044.1| zinc-binding protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876013|ref|ZP_05248723.1| zinc-binding domain-containing protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842034|gb|EET20448.1| zinc-binding domain-containing protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 153 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 1/148 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A E+A A E+P+GAV V +N+I+ + N+ L D TAHAEIL +R Sbjct: 6 QDDIFFMQKAYEQALLAYKAGEVPIGAVLVKDNQIVVQDFNKTIMLNDPTAHAEILVLRQ 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L LYVTLEPC MC + AR+ L Y + + G I + + + Sbjct: 66 AAKELENYRLVNTKLYVTLEPCIMCLGGLIQARVSELIYACDDTRVG-IFSREKLHRNKN 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ ++ G+ + ++++DFFK RR Sbjct: 125 INHNLKVTSGVMTEECSKLLRDFFKLRR 152 >gi|325273807|ref|ZP_08139995.1| CMP/dCMP deaminase zinc-binding protein [Pseudomonas sp. TJI-51] gi|324101066|gb|EGB98724.1| CMP/dCMP deaminase zinc-binding protein [Pseudomonas sp. TJI-51] Length = 159 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M AL A A E+PVGAV V + ++I + NR D +AHAE++AIR Sbjct: 9 SRDQEYMRLALSLAAEGAALGEVPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRA 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + S LP LYVTLEPC+MCA I +R+ R+ +GA PK G +++ QF+ Sbjct: 69 AAKAASNYRLPGSTLYVTLEPCSMCAGLIVHSRVMRVVFGALEPKAGIVQSQGQFFGQGF 128 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ Q QI+ DFFK RR Sbjct: 129 LNHRVMVEGGVLAQECGQILSDFFKARR 156 >gi|319779703|ref|YP_004130616.1| tRNA-specific adenosine-34 deaminase [Taylorella equigenitalis MCE9] gi|317109727|gb|ADU92473.1| tRNA-specific adenosine-34 deaminase [Taylorella equigenitalis MCE9] Length = 162 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 51/151 (33%), Positives = 78/151 (51%), Gaps = 3/151 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59 + FM AL+ A+ A E+PVGAV V N+ I+ + N+ D TAHAEI+A+ Sbjct: 5 IADNKKFMQLALQNAEKAYKSGEVPVGAVLVGPNQDILGQGYNQVIGTSDSTAHAEIVAL 64 Query: 60 RMGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 R + LP ++VTLEPC MC A+ AR+ L G+ +PK G + Sbjct: 65 REANLSIQNYRLPSGCTMFVTLEPCIMCLGALIHARLEHLVIGSRDPKTGACGGRLSIHA 124 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +H G+ + +I++DFF+E+R Sbjct: 125 -SDLNHHMHTTVGVLSEECSKILKDFFREKR 154 >gi|50843619|ref|YP_056846.1| putative cytidine and deoxycytidylate deaminase [Propionibacterium acnes KPA171202] gi|50841221|gb|AAT83888.1| putative cytidine and deoxycytidylate deaminase [Propionibacterium acnes KPA171202] gi|313765224|gb|EFS36588.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL013PA1] gi|313771619|gb|EFS37585.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL074PA1] gi|313794199|gb|EFS42219.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL110PA1] gi|313803320|gb|EFS44516.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL110PA2] gi|313808654|gb|EFS47114.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL087PA2] gi|313810633|gb|EFS48347.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL083PA1] gi|313817055|gb|EFS54769.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL059PA1] gi|313819106|gb|EFS56820.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL046PA2] gi|313821181|gb|EFS58895.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL036PA1] gi|313823858|gb|EFS61572.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL036PA2] gi|313829225|gb|EFS66939.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL063PA2] gi|313831470|gb|EFS69184.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL007PA1] gi|313834120|gb|EFS71834.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL056PA1] gi|313839149|gb|EFS76863.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL086PA1] gi|314916774|gb|EFS80605.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL005PA4] gi|314919085|gb|EFS82916.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL050PA1] gi|314921113|gb|EFS84944.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL050PA3] gi|314926198|gb|EFS90029.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL036PA3] gi|314931378|gb|EFS95209.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL067PA1] gi|314956234|gb|EFT00606.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL027PA1] gi|314958729|gb|EFT02831.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL002PA1] gi|314961035|gb|EFT05136.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL002PA2] gi|314963855|gb|EFT07955.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL082PA1] gi|314968860|gb|EFT12958.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL037PA1] gi|314974836|gb|EFT18931.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL053PA1] gi|314977837|gb|EFT21931.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL045PA1] gi|314979008|gb|EFT23102.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL072PA2] gi|314984517|gb|EFT28609.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL005PA1] gi|314985912|gb|EFT30004.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL005PA2] gi|314989321|gb|EFT33412.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL005PA3] gi|315078338|gb|EFT50377.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL053PA2] gi|315081352|gb|EFT53328.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL078PA1] gi|315085008|gb|EFT56984.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL027PA2] gi|315087538|gb|EFT59514.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL002PA3] gi|315089555|gb|EFT61531.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL072PA1] gi|315095685|gb|EFT67661.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL038PA1] gi|315099989|gb|EFT71965.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL059PA2] gi|315102851|gb|EFT74827.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL046PA1] gi|315106621|gb|EFT78597.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL030PA1] gi|315110552|gb|EFT82528.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL030PA2] gi|327325845|gb|EGE67636.1| tRNA-specific adenosine deaminase [Propionibacterium acnes HL096PA3] gi|327332941|gb|EGE74673.1| tRNA-specific adenosine deaminase [Propionibacterium acnes HL096PA2] gi|327448646|gb|EGE95300.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL043PA1] gi|327450305|gb|EGE96959.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL013PA2] gi|327451128|gb|EGE97782.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL043PA2] gi|327455462|gb|EGF02117.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL087PA3] gi|327455948|gb|EGF02603.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL092PA1] gi|327457603|gb|EGF04258.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL083PA2] gi|328756878|gb|EGF70494.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL087PA1] gi|328757762|gb|EGF71378.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL020PA1] gi|328759467|gb|EGF73083.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL025PA2] gi|328761913|gb|EGF75422.1| tRNA-specific adenosine deaminase [Propionibacterium acnes HL099PA1] gi|332676565|gb|AEE73381.1| tRNA-specific adenosine deaminase [Propionibacterium acnes 266] Length = 149 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL+ A+ AA ++P+GAV + N +++S AGN D TAHAE+LAIR Sbjct: 1 MTQALDVARRAATWGDVPIGAVILGANGEVLSEAGNERERTGDPTAHAEVLAIRRAAEAR 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPCTMCA I ARI R+ +GA +PK G + + H P Sbjct: 61 DGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDPKAGAVSSLFDAMRDPRLPHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + S ++++FF R Sbjct: 121 KVVTGVMAEESSALLREFFDGHR 143 >gi|150009165|ref|YP_001303908.1| putative cytosine/adenosine deaminase [Parabacteroides distasonis ATCC 8503] gi|255015772|ref|ZP_05287898.1| putative cytosine/adenosine deaminase [Bacteroides sp. 2_1_7] gi|256841721|ref|ZP_05547227.1| cytosine/adenosine deaminase [Parabacteroides sp. D13] gi|298377094|ref|ZP_06987048.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 3_1_19] gi|149937589|gb|ABR44286.1| putative cytosine/adenosine deaminase [Parabacteroides distasonis ATCC 8503] gi|256736615|gb|EEU49943.1| cytosine/adenosine deaminase [Parabacteroides sp. D13] gi|298266078|gb|EFI07737.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 3_1_19] Length = 146 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 65/147 (44%), Positives = 83/147 (56%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL EA+ AA E+PVGAV V NN+II+RA N+ L DVTAHAE+LAI Sbjct: 5 NDEYFMKQALVEARAAASEGEVPVGAVIVCNNQIIARAHNQTECLNDVTAHAEMLAITAA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L + L LYVT+EPC MCA AI A++ + YGAS+ K G + Sbjct: 65 AGVLGAKYLTNCSLYVTVEPCIMCAGAIGWAQLSTIVYGASDDKRG-----FSKFAPQAF 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H I GI E+ + +Q FFK+RR Sbjct: 120 HPKAIIKKGILEKECAEEMQRFFKQRR 146 >gi|213019012|ref|ZP_03334819.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995121|gb|EEB55762.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 135 Score = 193 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 71/142 (50%), Positives = 94/142 (66%), Gaps = 8/142 (5%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M+ A+E+A+ A E+P+GAV V N IIS A N D TAHAE+L IR S Sbjct: 1 MALAIEQAKLAQKDGEVPIGAVIVNGNNIISSAHN---ISNDPTAHAEMLTIRQA---FS 54 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L E ++YVTLEPC MCA AIS A+I+RLY+GA NPKGGG+ENGT+ + C+H PE Sbjct: 55 TSTLYEAEMYVTLEPCPMCAQAISFAKIKRLYFGAYNPKGGGVENGTRIFQF--CNHIPE 112 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y GI E + +++DFF++ R Sbjct: 113 VYGGILETKCSLLLKDFFEKLR 134 >gi|313836522|gb|EFS74236.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL037PA2] gi|314928976|gb|EFS92807.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL044PA1] gi|314971034|gb|EFT15132.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium acnes HL037PA3] Length = 156 Score = 193 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL+ A+ AA ++P+GAV + + ++S AGN D TAHAE+LAIR Sbjct: 8 MTQALDVARRAAAWGDVPIGAVVLGSDGDVLSEAGNERELTGDPTAHAEVLAIRRAAEAR 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPCTMCA AI ARI R+ +GA +PK G + + H Sbjct: 68 DGWRLGDCTLIVTLEPCTMCAGAIVAARIPRVVFGAFDPKAGAVSSLFDVMRDPRLPHRT 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + S ++++FF R Sbjct: 128 EVVTGVMVEESSALLREFFDGHR 150 >gi|237714907|ref|ZP_04545388.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262406825|ref|ZP_06083374.1| ComE operon protein 2 [Bacteroides sp. 2_1_22] gi|298483658|ref|ZP_07001833.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. D22] gi|229445232|gb|EEO51023.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355528|gb|EEZ04619.1| ComE operon protein 2 [Bacteroides sp. 2_1_22] gi|295084706|emb|CBK66229.1| Cytosine/adenosine deaminases [Bacteroides xylanisolvens XB1A] gi|298270228|gb|EFI11814.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. D22] Length = 145 Score = 193 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 80/149 (53%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM AL EA AA R E+PVGAV V +II+RA N L DVTAHAE+ AI Sbjct: 1 MLDDIYFMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y + Sbjct: 61 AAANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEKRG-----YQKYAGS 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI ++++FF +R Sbjct: 116 ALHPKTVVVKGIMADECAALMKEFFAAKR 144 >gi|328906579|gb|EGG26354.1| cytidine and deoxycytidylate deaminase zinc-binding region [Propionibacterium sp. P08] Length = 160 Score = 193 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL+ A+ AA ++P+GAV + + ++S AGN D TAHAE+LAIR Sbjct: 12 MTQALDVARRAAAWGDVPIGAVVLGSDGDVLSEAGNERELTGDPTAHAEVLAIRRAAEAR 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPCTMCA AI ARI R+ +GA +PK G + + H Sbjct: 72 DGWRLGDCTLIVTLEPCTMCAGAIVAARIPRVVFGAFDPKAGAVSSLFDVMRDPRLPHRT 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + S ++++FF R Sbjct: 132 EVVTGVMVEESSALLREFFDGHR 154 >gi|326328640|ref|ZP_08194980.1| cytidine and deoxycytidylate deaminase family protein [Nocardioidaceae bacterium Broad-1] gi|325953601|gb|EGD45601.1| cytidine and deoxycytidylate deaminase family protein [Nocardioidaceae bacterium Broad-1] Length = 165 Score = 193 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 + M ALEE + A ++P+GAV V +I R N D T HAE++A+R Sbjct: 5 NRWEAPMRAALEEGRAALATGDVPIGAVVVDPSGAVIGRGRNVREAEADPTGHAEVVALR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L L VTLEPCTMCA A LAR+ R+ +GA + K G + + Sbjct: 65 EAAKARGEWRLEGCTLVVTLEPCTMCAGAAVLARVERIVFGAFDDKAGAVGSLWDVVRDR 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ + R +++DFF +R Sbjct: 125 RLNHRPEVVAGLLAEEQRALLEDFFGAQR 153 >gi|56961816|ref|YP_173538.1| cytosine/adenosine deaminase [Bacillus clausii KSM-K16] gi|56908050|dbj|BAD62577.1| cytosine/adenosine deaminase [Bacillus clausii KSM-K16] Length = 165 Score = 193 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 52/147 (35%), Positives = 72/147 (48%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ ALEEA A E+P+GAV + K+I+ A N AHAE+LAI Sbjct: 5 THEKWMNVALEEAAKAEEIGEVPIGAVIIKEGKLIASAYNLREANHSALAHAELLAIEQA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L LYVTLEPC MCA AI +RI + YGA + K G Sbjct: 65 NKKLGAWRLEGCTLYVTLEPCPMCAGAIVQSRIPTVVYGAQDQKAGCAGTLMNLLQEQRF 124 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ E+ + + FF++ R Sbjct: 125 NHRCEVISGVLEEGCGEKLSAFFRKLR 151 >gi|282856349|ref|ZP_06265628.1| cytidine and deoxycytidylate deaminase family protein [Pyramidobacter piscolens W5455] gi|282585720|gb|EFB91009.1| cytidine and deoxycytidylate deaminase family protein [Pyramidobacter piscolens W5455] Length = 166 Score = 193 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 62/150 (41%), Positives = 81/150 (54%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59 + +M+ ALE AA +IPVGA+ V +II R NR R D TAHAE++A+ Sbjct: 2 LTSDQEYMNLALELGLQAAREGDIPVGALVVDPCGEIIGRGRNRRRIEHDPTAHAEVVAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R R L L LYVTLEPC MCA A+ AR+ RL YG ++PK G Sbjct: 62 REAARNLGVWNLNGCSLYVTLEPCPMCAGALVQARVSRLVYGCTDPKAGACGTLYDLTRD 121 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ PG+ EQ R ++QDFF+E R Sbjct: 122 TRLFHRLQVVPGVMEQECRALLQDFFRECR 151 >gi|71902073|ref|ZP_00684112.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella fastidiosa Ann-1] gi|71728165|gb|EAO30357.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella fastidiosa Ann-1] Length = 203 Score = 193 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 2/149 (1%) Query: 3 KGNVFMSCALEEAQNAALR-NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 + +M AL A AA +EIPVGAV + ++ N N D +AHAEI+A+R Sbjct: 48 EHTHWMRHALTLAHRAATEFDEIPVGAVLISPEGTLLGEGCNYNITSHDPSAHAEIMALR 107 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L +P LYVTLEPC MCA AI ARI L Y A++PK G + Sbjct: 108 AAGHQLRNHRMPGCTLYVTLEPCLMCAMAIIHARIAHLIYAATDPKTGACGSTFDILNDP 167 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +Y G+ + + + + ++F+ +R Sbjct: 168 RHNHHVHVYGGLLAEEASRRLTNYFRTKR 196 >gi|126697581|ref|YP_001086478.1| putative cytosine/adenosine deaminase [Clostridium difficile 630] gi|254973665|ref|ZP_05270137.1| putative cytosine/adenosine deaminase [Clostridium difficile QCD-66c26] gi|255091056|ref|ZP_05320534.1| putative cytosine/adenosine deaminase [Clostridium difficile CIP 107932] gi|255099172|ref|ZP_05328149.1| putative cytosine/adenosine deaminase [Clostridium difficile QCD-63q42] gi|255312710|ref|ZP_05354293.1| putative cytosine/adenosine deaminase [Clostridium difficile QCD-76w55] gi|255515470|ref|ZP_05383146.1| putative cytosine/adenosine deaminase [Clostridium difficile QCD-97b34] gi|255648562|ref|ZP_05395464.1| putative cytosine/adenosine deaminase [Clostridium difficile QCD-37x79] gi|255654097|ref|ZP_05399506.1| putative cytosine/adenosine deaminase [Clostridium difficile QCD-23m63] gi|260681784|ref|YP_003213069.1| putative cytosine/adenosine deaminase [Clostridium difficile CD196] gi|260685381|ref|YP_003216514.1| putative cytosine/adenosine deaminase [Clostridium difficile R20291] gi|296452478|ref|ZP_06894177.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP08] gi|296878246|ref|ZP_06902256.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP07] gi|306518691|ref|ZP_07405038.1| putative cytosine/adenosine deaminase [Clostridium difficile QCD-32g58] gi|115249018|emb|CAJ66829.1| transfer RNA specific adenosine deaminase [Clostridium difficile] gi|260207947|emb|CBA60067.1| putative cytosine/adenosine deaminase [Clostridium difficile CD196] gi|260211397|emb|CBE01470.1| putative cytosine/adenosine deaminase [Clostridium difficile R20291] gi|296258684|gb|EFH05580.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP08] gi|296430754|gb|EFH16591.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP07] Length = 151 Score = 193 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 87/149 (58%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ + +M AL+EA A + E P+GA+ V +N+II+RA N LKD TAHAEILAI+ Sbjct: 1 MES-SFYMKEALKEAYKAYNKKETPIGAIIVKDNQIIARAHNLTETLKDSTAHAEILAIK 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L + DLYVT+EPC MC+ AI +RI++L G + K IE +F Sbjct: 60 QASEKLGGWRLTDCDLYVTMEPCIMCSGAIVNSRIKKLIIGTRHVKNSYIEKQHEFKLDY 119 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +++ ++ + ++ I+Q+FFK R Sbjct: 120 FNNNNVKVAFDVLQEECSIILQEFFKALR 148 >gi|218532085|ref|YP_002422901.1| CMP/dCMP deaminase zinc-binding [Methylobacterium chloromethanicum CM4] gi|218524388|gb|ACK84973.1| CMP/dCMP deaminase zinc-binding [Methylobacterium chloromethanicum CM4] Length = 147 Score = 193 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 74/128 (57%), Positives = 91/128 (71%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGA V + +++ AGNR R L D TAHAEILAIR C LS E L DLYVTLE Sbjct: 19 GEVPVGAAVVRDGAVLAVAGNRPRTLCDPTAHAEILAIRAACAALSDERLTGCDLYVTLE 78 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI+ ARIRRLYY AS+PKGGG+E+G + + TCHH+PE+Y G E + ++ Sbjct: 79 PCPMCAGAIAFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFREGEAAGLL 138 Query: 142 QDFFKERR 149 +DFF ERR Sbjct: 139 RDFFAERR 146 >gi|311106622|ref|YP_003979475.1| tRNA-specific adenosine deaminase [Achromobacter xylosoxidans A8] gi|310761311|gb|ADP16760.1| tRNA-specific adenosine deaminase [Achromobacter xylosoxidans A8] Length = 163 Score = 193 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 1/137 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL+EAQ A E+PVGA+ V I+ R NR D TAHAEI+A+R Sbjct: 10 QDASFMELALQEAQAAYDIGEVPVGALVVSAQGDILGRGYNRTIIDHDPTAHAEIVALRG 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L LP + +YVTLEPC MC A+ AR+ R+ +GA +PK G + ++ Sbjct: 70 AARALENYRLPGITVYVTLEPCVMCIGAMLHARLARVVFGAYDPKTGACGSVLDVGSVPK 129 Query: 122 CHHSPEIYPGISEQRSR 138 +H + G+ + Sbjct: 130 LNHHTSVTGGVLAEPCG 146 >gi|332879982|ref|ZP_08447666.1| cytidine and deoxycytidylate deaminase zinc-binding region [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681978|gb|EGJ54891.1| cytidine and deoxycytidylate deaminase zinc-binding region [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 145 Score = 193 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 86/149 (57%), Gaps = 6/149 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM ALEEA+ A +EIPVGA+ ++N+II+RA N L DVTAHAE+ AI Sbjct: 1 MTEDEYFMQKALEEAEVAFEEDEIPVGAIITIDNRIIARAHNMTERLNDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M L + L + +Y+TLEPC MCA A+ +++ RL Y A++ G G Sbjct: 61 MAANYLGGKYLKDCTMYLTLEPCAMCAGALYWSQLSRLVYAAADTHRGYTVMG------G 114 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 T H EI G+ + ++++ FF+++R Sbjct: 115 TLHPKTEITTGVLAAPATELLKQFFQQKR 143 >gi|255304952|ref|ZP_05349126.1| putative cytosine/adenosine deaminase [Clostridium difficile ATCC 43255] Length = 151 Score = 193 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 87/149 (58%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ + +M AL+EA A + E P+GA+ V +N+II+RA N LKD TAHAEILAI+ Sbjct: 1 MES-SFYMKEALKEAYKAYNKKETPIGAIIVKDNQIIARAHNLTETLKDSTAHAEILAIK 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L + DLYVT+EPC MC+ AI +RI++L G + K IE +F Sbjct: 60 QASEKLGGWRLTDCDLYVTMEPCIMCSGAIVNSRIKKLIIGTRHVKNSYIEKQHEFKLDY 119 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +++ ++ + ++ ++Q+FFK R Sbjct: 120 FNNNNVKVAFDVLQEECSIMLQEFFKALR 148 >gi|241563436|ref|XP_002401703.1| conserved hypothetical protein [Ixodes scapularis] gi|215501895|gb|EEC11389.1| conserved hypothetical protein [Ixodes scapularis] Length = 159 Score = 193 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 64/148 (43%), Positives = 94/148 (63%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL++A+ A +NE+PVGAV V N KII+ N E + HAEI+AI Sbjct: 12 NNFFMEQALKQARIAFDKNEVPVGAVIVDRLNQKIIASTHNNTEEKNNALCHAEIIAINE 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C ++ + L + D+YVTLE C MCAAAI+ +R++RL+YGA + K G +E+ +++ + Sbjct: 72 ACNLIYSKNLNDYDIYVTLESCAMCAAAIAHSRLKRLFYGAFDSKHGAVESNLRYFNSSA 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C H PEIY GI + S ++++FFK R Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159 >gi|198283023|ref|YP_002219344.1| CMP/dCMP deaminase zinc-binding [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665839|ref|YP_002425229.1| cytidine and deoxycytidylate deaminase family protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247544|gb|ACH83137.1| CMP/dCMP deaminase zinc-binding [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518052|gb|ACK78638.1| cytidine and deoxycytidylate deaminase family protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 177 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 77/149 (51%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ A AA + E+PVGAV V +++ A N D +AHAE+ +R Sbjct: 9 SRDAAWMALALDYAARAAGQGEVPVGAVLVDVGGHLLAAAHNTPVRDHDPSAHAEMRVLR 68 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R L L LYVTLEPC MC A+ AR+ RL YGA +PK G +E+ Sbjct: 69 QAARSLQNYRLTGTTLYVTLEPCVMCVGALLHARVARLVYGAPDPKAGAVESLYHLLEDD 128 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ S +++DFF+ RR Sbjct: 129 RFNHRVMAQGGLLAGPSATLLRDFFQARR 157 >gi|170702297|ref|ZP_02893195.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria IOP40-10] gi|170132806|gb|EDT01236.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria IOP40-10] Length = 193 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A A+ A E+PVGAV V +++I+R N D +AHAE+ A+RM Sbjct: 30 RDLHFMRLAQAAAEEARAAGEVPVGAVLVCGDEVIARGFNHPIGGHDPSAHAEMAALRMA 89 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L +P +LYVTLEPC MCA AI ARI R+ YGA++PK G + + Sbjct: 90 AQHLQNYRMPGCELYVTLEPCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQL 149 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++ FF ERR Sbjct: 150 NHHTEVTGGVLADECGAALKSFFAERR 176 >gi|288929641|ref|ZP_06423485.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp. oral taxon 317 str. F0108] gi|288329146|gb|EFC67733.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp. oral taxon 317 str. F0108] Length = 144 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ M AL+EA+ A + E+P+GAV ++++RA N L DVTAHAE+ AI Sbjct: 1 MQVDEQMMRKALDEARQALAQGEVPIGAVIACKGRVVARAHNLTETLCDVTAHAEMQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L + LPE LYVT+EPC MCA A A++ R+ YG + K G + + Sbjct: 61 AAANMLGGKYLPECTLYVTVEPCPMCAGACGWAQLGRIVYGTRDEKRG-----YERFAPN 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E+ R++++ FF R Sbjct: 116 VLHAKATVTAGVLEEECRELMKSFFSGLR 144 >gi|260550109|ref|ZP_05824323.1| cytosine/adenosine deaminase [Acinetobacter sp. RUH2624] gi|260406864|gb|EEX00343.1| cytosine/adenosine deaminase [Acinetobacter sp. RUH2624] Length = 167 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 78/148 (52%), Gaps = 3/148 (2%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K +M A E+A+ AA + EIPVGAV V NK+I N L D TAHAEI A Sbjct: 1 MSKFSDEYWMQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQA 60 Query: 59 IRMGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 IR C++L LP + LYVTLEPCTMC A+ ARI+ + +G PK G + + Q Sbjct: 61 IRSACQLLKNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTVEPKAGSLVSTRQLL 120 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 +H G ++ Q + FF Sbjct: 121 ENGYYNHKFTFEQGCLHEKCAQQLSLFF 148 >gi|302870406|ref|YP_003839043.1| CMP/dCMP deaminase [Micromonospora aurantiaca ATCC 27029] gi|302573265|gb|ADL49467.1| CMP/dCMP deaminase zinc-binding [Micromonospora aurantiaca ATCC 27029] Length = 210 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 8/153 (5%) Query: 2 KKGNVFMSCALEEAQNA-------ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAH 53 ++ ++M ALE A +++PVGAV + ++ N D TAH Sbjct: 58 QRHELWMRRALEVAVTGPDGPAADRDADDVPVGAVLYGPDGTELAIGRNERELTGDPTAH 117 Query: 54 AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 AE+LA+R + L + L + L VTLEPCTMCA AI+LAR+ + +GA PK G + + Sbjct: 118 AEVLALRRAAQRLGRWRLDDCTLVVTLEPCTMCAGAIALARVSTVVFGAWEPKTGAVGSL 177 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 H PE+Y G+ E+ S +++ FF+ Sbjct: 178 WDVLRDRRVTHRPEVYGGVLERESATLLRAFFR 210 >gi|239948393|ref|ZP_04700146.1| cytosine/adenosine deaminase [Rickettsia endosymbiont of Ixodes scapularis] gi|239922669|gb|EER22693.1| cytosine/adenosine deaminase [Rickettsia endosymbiont of Ixodes scapularis] Length = 159 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 64/148 (43%), Positives = 94/148 (63%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL++A+ A +NE+PVGAV V N KII+ N E + HAEI+AI Sbjct: 12 NNFFMEQALKQARIAFDKNEVPVGAVIVDRLNQKIIASTHNNTEEKNNALCHAEIIAINE 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C ++ + L + D+YVTLE C MCAAAI+ +R++RL+YGA + K G +E+ +++ + Sbjct: 72 ACNLIYSKNLNDYDIYVTLESCAMCAAAIAHSRLKRLFYGAFDSKHGAVESNLRYFNSSA 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C H PEIY GI + S ++++FFK R Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159 >gi|163853270|ref|YP_001641313.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1] gi|163664875|gb|ABY32242.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1] Length = 147 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 72/128 (56%), Positives = 90/128 (70%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGA V + +++ AGNR R L D TAHAEILAIR C L E L DLYVTLE Sbjct: 19 GEVPVGAAVVRDGTVLAVAGNRPRTLSDPTAHAEILAIRAACAALRDERLTGCDLYVTLE 78 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI+ ARIRRLYY AS+PKGGG+E+G + + TCHH+PE+Y G E + ++ Sbjct: 79 PCPMCAGAIAFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFREGEAAGLL 138 Query: 142 QDFFKERR 149 ++FF ERR Sbjct: 139 REFFAERR 146 >gi|58584428|ref|YP_198001.1| cytosine/adenosine deaminase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418744|gb|AAW70759.1| Cytosine/adenosine deaminase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 143 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 72/142 (50%), Positives = 93/142 (65%), Gaps = 5/142 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+E+A+ A +EIP+GAV V + IIS A N D TAHAE+L IR C +LS Sbjct: 1 MEFAVEQAKLAKKNDEIPIGAVIVSGDNIISFAHN---ISNDPTAHAEMLVIRQACELLS 57 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 +L D+YVTLEPC MCA AIS ARI+RLY+GA N KGGGIENG + + C H PE Sbjct: 58 TSVLCNADMYVTLEPCPMCAQAISFARIKRLYFGAYNSKGGGIENGAKIFQF--CSHVPE 115 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G+ E +++DFF++ R Sbjct: 116 VYGGVLETECSFLLKDFFEKLR 137 >gi|332292166|ref|YP_004430775.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus 4H-3-7-5] gi|332170252|gb|AEE19507.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus 4H-3-7-5] Length = 149 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 82/147 (55%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL+EAQ A + EIPVGAV V++N II+RA N L DVTAHAE+ AI Sbjct: 6 DDAYFMKKALQEAQAAFDQGEIPVGAVVVIDNMIIARAHNLTERLTDVTAHAEMQAITSA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L + LYVTLEPC MCA A+ ++I R+ YGA + + G GT Sbjct: 66 SNFIGGKYLQQCTLYVTLEPCQMCAGALYWSQIGRIVYGAKDLRRGYDVMGTIL------ 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ Q I++ FF ++R Sbjct: 120 HPKTKVESGVLAQECESIMKRFFVDKR 146 >gi|189501687|ref|YP_001957404.1| hypothetical protein Aasi_0231 [Candidatus Amoebophilus asiaticus 5a2] gi|189497128|gb|ACE05675.1| hypothetical protein Aasi_0231 [Candidatus Amoebophilus asiaticus 5a2] Length = 155 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 63/147 (42%), Positives = 88/147 (59%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL+EA A NEIPVGAV V NN+II++A N+ +LKD TAHAE+LA+ Sbjct: 13 DDEYFMRIALQEAMKAYEVNEIPVGAVVVSNNRIIAKAHNQVEKLKDATAHAEMLALSSA 72 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + LP+ LYVTLEPC MCA+A +++ R+ + AS+ + G GT Sbjct: 73 FSYIGGKYLPDCTLYVTLEPCLMCASATFWSKLSRIVFSASDIRLGYRTFGTNV-----L 127 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H +I GI EQ S++++Q FF + R Sbjct: 128 HPKTKIDAGILEQESQKVLQSFFAKLR 154 >gi|255037951|ref|YP_003088572.1| CMP/dCMP deaminase zinc-binding [Dyadobacter fermentans DSM 18053] gi|254950707|gb|ACT95407.1| CMP/dCMP deaminase zinc-binding [Dyadobacter fermentans DSM 18053] Length = 150 Score = 193 bits (492), Expect = 7e-48, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 76/147 (51%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM AL A A EIPVGA+ V ++II R N+ L DVTAHAE++AI Sbjct: 8 TDHFFMEEALALAHKAYEEGEIPVGALVVAKDRIIGRGYNQTERLNDVTAHAEMIAITAA 67 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L + LYVTLEPC MCA A+ +++R+ GA + K G Sbjct: 68 ADHLGSKYLTDCTLYVTLEPCVMCAGALYWTQVKRVVVGAMDEKRG-----FSRVGQPLL 122 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ GI S++++ FF++ R Sbjct: 123 HPKTKLVTGIMATESQELLLKFFRQLR 149 >gi|220918865|ref|YP_002494169.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter dehalogenans 2CP-1] gi|219956719|gb|ACL67103.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter dehalogenans 2CP-1] Length = 154 Score = 193 bits (492), Expect = 7e-48, Method: Composition-based stats. Identities = 57/138 (41%), Positives = 79/138 (57%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ AA R E+PVGAVA+ +++ R N +D TAHAE+LAI+ R L Sbjct: 1 MQEALGLAREAAARGEVPVGAVALFEGRVVGRGANAREAARDPTAHAELLAIQEAARTLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L V + VTLEPC MCA A+ LARI RL YGAS+PK G + +H Sbjct: 61 RWRLTGVTVVVTLEPCAMCAGAMVLARIDRLVYGASDPKAGCTGSLQDLSADPRLNHRFP 120 Query: 128 IYPGISEQRSRQIIQDFF 145 + G+ + S ++++ FF Sbjct: 121 VERGVLAEESGELLRAFF 138 >gi|84501544|ref|ZP_00999716.1| hypothetical protein OB2597_15120 [Oceanicola batsensis HTCC2597] gi|84390165|gb|EAQ02724.1| hypothetical protein OB2597_15120 [Oceanicola batsensis HTCC2597] Length = 154 Score = 193 bits (492), Expect = 7e-48, Method: Composition-based stats. Identities = 75/144 (52%), Positives = 97/144 (67%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL+EA+ AA R E+PVGAV V ++++R GNR RE D +AHAE+L IR C Sbjct: 9 FMHLALDEARAAAARGEVPVGAVLVSPGGEVVARDGNRTREKADPSAHAEMLVIRAACAA 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 E LP DLYVTLEPC MCAA I ARI RLYYGA++PK GG+ G + +T CHH Sbjct: 69 AGSERLPGHDLYVTLEPCPMCAAVIGAARIARLYYGAADPKSGGLGQGPRIFTHPQCHHV 128 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+Y GI + + +++ FF++RR Sbjct: 129 PEVYDGIGAREAEDLLKGFFRDRR 152 >gi|42520340|ref|NP_966255.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410078|gb|AAS14189.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 135 Score = 193 bits (492), Expect = 7e-48, Method: Composition-based stats. Identities = 72/142 (50%), Positives = 92/142 (64%), Gaps = 8/142 (5%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+E+A+ A +E+P+GAV V + IIS A N D TAHAE+LAIR S Sbjct: 1 MELAIEQAKLAQKNDEVPIGAVIVSGDNIISSAHN---ISSDPTAHAEMLAIRQA---FS 54 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + D+YVTLEPC MCA AIS ARI+RLY+GA NPKGGGIENG + + C H PE Sbjct: 55 TPTLCDADMYVTLEPCPMCAQAISFARIKRLYFGAYNPKGGGIENGAKIFQF--CSHIPE 112 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y GI E +++DFF++ R Sbjct: 113 VYGGILEIECSFLLKDFFEKLR 134 >gi|307243435|ref|ZP_07525591.1| putative thiamine-phosphate pyrophosphorylase [Peptostreptococcus stomatis DSM 17678] gi|306493159|gb|EFM65156.1| putative thiamine-phosphate pyrophosphorylase [Peptostreptococcus stomatis DSM 17678] Length = 391 Score = 193 bits (492), Expect = 7e-48, Method: Composition-based stats. Identities = 57/144 (39%), Positives = 81/144 (56%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FMS AL+EA+ A E P+GAV V + +I+ R N+ D T HAE++AI+ + Sbjct: 243 YFMSEALKEARKAYAMKETPIGAVVVYDGQIVGRGFNQVELTGDPTQHAEMVAIQEAAKA 302 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L + +YVT+EPC MCA AI +RI+ LY GAS+ K + F Sbjct: 303 LGRWRLYDCQMYVTMEPCLMCAGAIENSRIKSLYIGASHKKNHLVGKHNDFKLEVYKDRK 362 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI E+ + +I+ DFFKERR Sbjct: 363 IDYEFGILEKEASKILTDFFKERR 386 >gi|311234063|gb|ADP86917.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio vulgaris RCH1] Length = 214 Score = 193 bits (492), Expect = 7e-48, Method: Composition-based stats. Identities = 56/146 (38%), Positives = 76/146 (52%), Gaps = 1/146 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M AL EA+ A E+PVGAV V +II R NR D +AHAE++A+RM Sbjct: 67 ERLMDEALAEARLAQAEGEVPVGAVVVDKAGRIIGRGHNRCLRDNDPSAHAEMVALRMAA 126 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L L VTLEPC MCA AI AR+ + YGA +PK G + + + + + Sbjct: 127 TTTANYRLGGTFLVVTLEPCLMCAGAIVHARVEGVVYGAEDPKAGAVTSCLEAFEQPFLN 186 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H P G+ + I++DFF RR Sbjct: 187 HRPWHMGGLRRRACTAILKDFFNGRR 212 >gi|316932708|ref|YP_004107690.1| CMP/dCMP deaminase zinc-binding protein [Rhodopseudomonas palustris DX-1] gi|315600422|gb|ADU42957.1| CMP/dCMP deaminase zinc-binding protein [Rhodopseudomonas palustris DX-1] Length = 148 Score = 193 bits (492), Expect = 7e-48, Method: Composition-based stats. Identities = 68/126 (53%), Positives = 91/126 (72%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +P+G V V + +I++AGNR +D TAHAE+LAIR L E L + DLYVTLEPC Sbjct: 23 VPIGCVIVRDGVVIAKAGNRTLTDRDPTAHAELLAIRQASAKLGSERLVDCDLYVTLEPC 82 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 TMCA AIS ARIRRLY+GA +PKGG +E+G +FY TCHH+PE+Y + E+ + ++++ Sbjct: 83 TMCAGAISFARIRRLYFGAFDPKGGAVESGVRFYGQPTCHHAPEVYSAVGEREAAAMLRE 142 Query: 144 FFKERR 149 FFK RR Sbjct: 143 FFKARR 148 >gi|85709873|ref|ZP_01040938.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Erythrobacter sp. NAP1] gi|85688583|gb|EAQ28587.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Erythrobacter sp. NAP1] Length = 149 Score = 193 bits (492), Expect = 7e-48, Method: Composition-based stats. Identities = 71/149 (47%), Positives = 96/149 (64%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ FMS AL A+ A+ E+P+GAV V + KII+ N R+ D TAHAEI+AIR Sbjct: 1 MRFPASFMSSALSLARAASELGEVPIGAVVVKDGKIIAEGHNETRDQNDPTAHAEIVAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L DL+VTLEPC MCA AI+ ARI RLYY AS+PKGG +E+G + + Sbjct: 61 RAAAALGDDRLTGCDLWVTLEPCAMCAGAIAHARIARLYYAASDPKGGAVEHGARVFEQE 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 C H PE+Y G+ E+ + +++ FF+ERR Sbjct: 121 QCLHRPEVYSGLGEEEAADMLRGFFRERR 149 >gi|330950762|gb|EGH51022.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae Cit 7] Length = 167 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM AL A AL E+PVGAV V N +II R N D +AHAE++AIR Sbjct: 10 SKDQYFMREALALAAQGALLGEVPVGAVLVQNGEIIGRGYNCPISGSDPSAHAEMVAIRD 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ A Sbjct: 70 AAKTLDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 130 LNHRVLFEGGVLGEECGTMLSEFFRMRR 157 >gi|320106996|ref|YP_004182586.1| CMP/dCMP deaminase zinc-binding protein [Terriglobus saanensis SP1PR4] gi|319925517|gb|ADV82592.1| CMP/dCMP deaminase zinc-binding protein [Terriglobus saanensis SP1PR4] Length = 171 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 50/129 (38%), Positives = 67/129 (51%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGA+ V +I+SR NR D + HAE++A+R L L LYVTL Sbjct: 24 GEVPVGAIVVSPTGEILSRGQNRVIRDHDPSGHAEMVALRAAGVALENYRLTGCSLYVTL 83 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA AI ARI RL Y A +PK G + + +H E+ G+ + Sbjct: 84 EPCAMCAGAILHARIARLVYAAPDPKAGACGSALEVMNHPRLNHRCEVVAGVLADECSTL 143 Query: 141 IQDFFKERR 149 +Q FF+ RR Sbjct: 144 LQTFFRSRR 152 >gi|254563191|ref|YP_003070286.1| tRNA-specific adenosine deaminase [Methylobacterium extorquens DM4] gi|254270469|emb|CAX26469.1| tRNA-specific adenosine deaminase [Methylobacterium extorquens DM4] Length = 147 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 72/128 (56%), Positives = 90/128 (70%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGA V + +++ AGNR R L D TAHAEILAIR C L E L DLYVTLE Sbjct: 19 GEVPVGAAVVRDGTVLAVAGNRPRTLCDPTAHAEILAIRAACAALRDERLTGCDLYVTLE 78 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI+ ARIRRLYY AS+PKGGG+E+G + + TCHH+PE+Y G E + ++ Sbjct: 79 PCPMCAGAIAFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFREGEAAGLL 138 Query: 142 QDFFKERR 149 ++FF ERR Sbjct: 139 REFFAERR 146 >gi|229819017|ref|YP_002880543.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333] gi|229564930|gb|ACQ78781.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333] Length = 158 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 53/140 (37%), Positives = 73/140 (52%), Gaps = 1/140 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + ALE A+ A +++PVGAV + + ++I R NR D TAHAE++AIR Sbjct: 2 DHEEAIGLALELARGALETDDVPVGAVVLGPDGEVIGRGANRREADDDPTAHAEMIAIRE 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L Q L L VTLEPCTMCA A LAR+ RL +GA +PK G + T Sbjct: 62 AAAALGQWRLEGCTLAVTLEPCTMCAGATVLARLPRLVFGAYDPKAGAAGSVTDVVRDPR 121 Query: 122 CHHSPEIYPGISEQRSRQII 141 +H E+ G+ E + + Sbjct: 122 LNHRVEVTGGVREAECGEEL 141 >gi|282899006|ref|ZP_06306988.1| Cytidine/deoxycytidylate deaminase, zinc-binding region protein [Cylindrospermopsis raciborskii CS-505] gi|281196146|gb|EFA71061.1| Cytidine/deoxycytidylate deaminase, zinc-binding region protein [Cylindrospermopsis raciborskii CS-505] Length = 154 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 58/143 (40%), Positives = 77/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 MS AL+ AQ A E+PVG V V +I + NR + +D TAHAEI+AIR R L Sbjct: 1 MSEALKLAQIAGDAGEVPVGCVIVNPQGNLIGQGENRKQRDQDPTAHAEIIAIRSAARTL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI AR++ L Y +PK G I +H Sbjct: 61 QNWHLDQCTLYVTLEPCPMCAGAIIHARLQTLVYAVDDPKTGAIRTVINIPGSPASNHRL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E SR+ +Q +F +R Sbjct: 121 QVIGGMLESASREKLQSWFVGQR 143 >gi|329851126|ref|ZP_08265883.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Asticcacaulis biprosthecum C19] gi|328839972|gb|EGF89544.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Asticcacaulis biprosthecum C19] Length = 154 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 63/150 (42%), Positives = 88/150 (58%), Gaps = 2/150 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAI 59 + M AL+ A AA E+P+GA+ + +++ A N L D AHAEILA+ Sbjct: 3 SEDETLMLAALDLAHEAARSGEVPIGALIFDPSSKTVVATARNSPILLNDPCAHAEILAL 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + + L + LYVTLEPC MCA AIS ARI R+ YGA +PKGG + +G +F+ Sbjct: 63 RAAGQAIGNYRLGGLWLYVTLEPCAMCAGAISHARIARVIYGAPDPKGGAVAHGPKFFAQ 122 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCH PE+ G+ + S +++ FFKERR Sbjct: 123 PTCHWRPEVTDGVLGEDSSALLKGFFKERR 152 >gi|21242782|ref|NP_642364.1| hypothetical protein XAC2038 [Xanthomonas axonopodis pv. citri str. 306] gi|21108264|gb|AAM36900.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 169 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 77/148 (52%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNA-ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL+ A+ A +EIPVGAV V ++ N N D +AHAEI+A+R Sbjct: 15 DVHWMQHALQLAERAERDYDEIPVGAVLVDAQGNVLGEGWNFNIASHDPSAHAEIVAMRE 74 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L+ L LYVTLEPC MCA A+ ARI R+ + AS+PK G + Sbjct: 75 AGRRLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 134 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ ++ + ++F+ +R Sbjct: 135 HNHRVQVCGGVLAAQASLRLTNYFRAKR 162 >gi|298207416|ref|YP_003715595.1| putative cytosine/adenosine deaminase [Croceibacter atlanticus HTCC2559] gi|83850052|gb|EAP87920.1| putative cytosine/adenosine deaminase [Croceibacter atlanticus HTCC2559] Length = 149 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 81/147 (55%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL EA+ A + EIPVGA+ V NN II+R+ N L DVTAHAE+ I Sbjct: 6 DDTYFMKKALLEAEEAYEKGEIPVGAIVVANNTIIARSHNLTELLNDVTAHAEMQVITSA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L + LYVTLEPC MCA A+ ++I ++ +GA + + G GT+ Sbjct: 66 ANHIGGKYLTDCTLYVTLEPCQMCAGALYWSQISKIVFGAEDTQRGYRVMGTKL------ 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ + + +++ FF ERR Sbjct: 120 HPKTKVVSGVLAEDASLLLKRFFIERR 146 >gi|317403100|gb|EFV83631.1| zinc-binding hydrolase [Achromobacter xylosoxidans C54] Length = 163 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 50/137 (36%), Positives = 73/137 (53%), Gaps = 1/137 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM+ AL+EA+ A E+PVGA+ V I+ R NR D TAHAEI+A+R Sbjct: 10 QDADFMTLALDEARAAYDIGEVPVGALVVSAQGDILGRGYNRTIIDHDPTAHAEIVALRG 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L LP + +YVTLEPC MC A+ AR+ R+ +GA +PK G + ++ Sbjct: 70 AARALENYRLPGITVYVTLEPCVMCIGAMLHARLARVVFGAYDPKTGACGSVLDVGSVPR 129 Query: 122 CHHSPEIYPGISEQRSR 138 +H + G+ + Sbjct: 130 LNHHTSVTGGVLAEPCG 146 >gi|67459711|ref|YP_247335.1| cytosine deaminase [Rickettsia felis URRWXCal2] gi|67005244|gb|AAY62170.1| Cytosine deaminase [Rickettsia felis URRWXCal2] Length = 159 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 67/148 (45%), Positives = 97/148 (65%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL++A A +NE+PVGAV V N KII + N E + HAEI+AI Sbjct: 12 NNFFMEQALKQAGIAFDKNEVPVGAVIVDRLNQKIIVSSHNNTEEKNNALYHAEIIAINE 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+ +++ + Sbjct: 72 ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSSV 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C + PEIY GI + SR ++++FFK R Sbjct: 132 CFYRPEIYSGILAEDSRLLMKEFFKRIR 159 >gi|163856878|ref|YP_001631176.1| putative zinc-binding hydrolase [Bordetella petrii DSM 12804] gi|163260606|emb|CAP42908.1| putative zinc-binding hydrolase [Bordetella petrii] Length = 164 Score = 193 bits (491), Expect = 9e-48, Method: Composition-based stats. Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 1/132 (0%) Query: 19 ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLY 77 E+PVGAV V +++ NR D TAHAEI+A+R R L LP V LY Sbjct: 27 WQAGEVPVGAVVVDAQGQVLGAGYNRTITDSDPTAHAEIVALRAAARRLGNYRLPGVSLY 86 Query: 78 VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 VTLEPC MC A+ AR+ R+ YGA++PK G + + +H I G+ + Sbjct: 87 VTLEPCVMCIGAMLHARLARVVYGAADPKTGACGSVLDVGAVVRLNHQTTITGGVLAEPC 146 Query: 138 RQIIQDFFKERR 149 +++ FF+ RR Sbjct: 147 GNLLRQFFRARR 158 >gi|296128347|ref|YP_003635597.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas flavigena DSM 20109] gi|296020162|gb|ADG73398.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas flavigena DSM 20109] Length = 176 Score = 193 bits (491), Expect = 9e-48, Method: Composition-based stats. Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 M AL EA+ A ++PVGAV + + ++ R N + D T HAE++A+R Sbjct: 30 DEAAMDLALVEARAALDSGDVPVGAVVLGPDGAVVGRGRNVREAVADPTGHAEVVAMREA 89 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L L VTLEPC MCA A+ AR+ RL GA + K G + Sbjct: 90 AATLGRWRLDGCTLVVTLEPCLMCAGAVLQARVPRLVLGAWDEKAGACGSQWDVVRDRRA 149 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ PG+ + S +++DFF R Sbjct: 150 LHRVEVVPGVRAEESATLLRDFFHPHR 176 >gi|312959178|ref|ZP_07773697.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas fluorescens WH6] gi|311286948|gb|EFQ65510.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas fluorescens WH6] Length = 165 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL A A+ E+PVGAV V + +II R N D +AHAE++AIR Sbjct: 13 SRDQHFMREALALAAQGAVLGEVPVGAVLVQDGEIIGRGFNCPISGNDPSAHAEMVAIRA 72 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R +S L LYVTLEPC+MCA I +RI R+ YGA PK G +++ QF+T Sbjct: 73 AARAISNYRLVGSTLYVTLEPCSMCAGLIVHSRIARVVYGALEPKAGIVQSQGQFFTQGF 132 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FFK RR Sbjct: 133 LNHRVLFEGGVLAEECGTVLSEFFKARR 160 >gi|300853298|ref|YP_003778282.1| tRNA-specific adenosine deaminase [Clostridium ljungdahlii DSM 13528] gi|300433413|gb|ADK13180.1| tRNA-specific adenosine deaminase [Clostridium ljungdahlii DSM 13528] Length = 145 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 78/149 (52%), Gaps = 4/149 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK FM A+ +A+ E+PVGAV V +N+IIS N + VTAHAE+LAI+ Sbjct: 1 MKD---FMLEAIRQAKKGLKLGEVPVGAVIVKDNEIISSCHNLKETVGIVTAHAEMLAIQ 57 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ILS L +YVTLEPC MCA AI RI +LY G +P G + Sbjct: 58 NASEILSNWRLTGCSMYVTLEPCPMCAGAILQCRINKLYIGTFDPTMGACGSVVNILQNR 117 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +I + ++ ++++ FFK RR Sbjct: 118 RLNRWVDIQW-MYNEQCSEMLEKFFKSRR 145 >gi|328675327|gb|AEB28002.1| tRNA-specific adenosine-34 deaminase [Francisella cf. novicida 3523] Length = 153 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 1/148 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A E+A A E+P+GAV V +++II+ N+ L D TAHAEIL +R Sbjct: 6 NEDIFFMQKAYEQALLAHQAGEVPIGAVLVRDSQIIAENFNQTITLNDPTAHAEILVLRS 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LYVTLEPC MC + AR+ L Y + + G + + + Sbjct: 66 AALEVGNYRLINTKLYVTLEPCIMCLGGLIQARVSELVYACDDSRVGAF-SREKLHQNKN 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ + G+ ++++DFFK+RR Sbjct: 125 INHNLGVTAGVMADECAKLLKDFFKQRR 152 >gi|251772814|gb|EES53374.1| putative zinc-binding cytidine/deoxycytidylate deaminase [Leptospirillum ferrodiazotrophum] Length = 158 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 83/148 (56%), Gaps = 1/148 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM+ AL A+N +++PVGA+ V+ +I+ N+ R D TAHAEI+A+R Sbjct: 10 QADVYFMNKALNLARNGI-VDDVPVGAIVVVGGEIVGEGVNQGRASHDPTAHAEIIALRR 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LP LYVTLEPC MC A+ RI RL +GA +PK G + + Sbjct: 69 AAARLENYRLPLSTLYVTLEPCLMCLGAMMEGRIHRLVFGARDPKRGVAGSLYDLHNDPR 128 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ E+ SR++++ FF+++R Sbjct: 129 FTHRIKVESGLCEEESRELLRQFFEKKR 156 >gi|227529514|ref|ZP_03959563.1| tRNA-adenosine deaminase [Lactobacillus vaginalis ATCC 49540] gi|227350599|gb|EEJ40890.1| tRNA-adenosine deaminase [Lactobacillus vaginalis ATCC 49540] Length = 173 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 59/142 (41%), Positives = 85/142 (59%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A+ EA+ AAL +E+P+GAV KII R N + +DVT HAE+LAI C Sbjct: 14 KFMRAAIAEAKKAALLDEVPIGAVVTYQGKIIGRGHNMREKFQDVTYHAEMLAIMEACSY 73 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L + DLYVTLEPC MC+ AI ARIR ++YGA++PK G +++ +H Sbjct: 74 LHSWRLEDCDLYVTLEPCMMCSGAIVNARIRNVFYGATDPKAGTVDSLYHLLGDDRLNHQ 133 Query: 126 PEIYPGISEQRSRQIIQDFFKE 147 + G+ ++ Q+++DFF+ Sbjct: 134 AYVTAGVLGEQCSQMLKDFFRA 155 >gi|312891108|ref|ZP_07750631.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM 18603] gi|311296416|gb|EFQ73562.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM 18603] Length = 159 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + FM AL+EA+ A +EIP+GA+ V +II R N L DV+AHAE+ A+ Sbjct: 13 ISPDDFFMKEALKEARLALAEDEIPIGALVVCKGQIIGRGHNLTERLNDVSAHAEMQALT 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + LP+ LYVT+EPC MCA A ++ ++ +GA + + G Sbjct: 73 AATNYTGGKYLPDCTLYVTMEPCVMCAGASYWFQVGKIVFGAYDTRLG-----FGRLNQK 127 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H I GI E +++++FF+++R Sbjct: 128 ITHPKTLITGGIMENECSELVREFFRKKR 156 >gi|150024385|ref|YP_001295211.1| cytosine/adenosine deaminase [Flavobacterium psychrophilum JIP02/86] gi|149770926|emb|CAL42391.1| Probable cytosine/adenosine deaminase [Flavobacterium psychrophilum JIP02/86] Length = 146 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 87/147 (59%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL+EA A + EIPVGA+ V+NN+II+++ N L DVTAHAE+ AI Sbjct: 6 TDEYFMRKALQEAYVAFDKEEIPVGAIVVINNRIIAKSHNLTELLNDVTAHAEMQAITAS 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L LYVTLEPC MCA A+ ++I ++ +GAS+P+ G + GTQ Sbjct: 66 ANFLGGKYLTNCILYVTLEPCQMCAGALYWSQISKIVFGASDPQRGFTKMGTQL------ 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI E +++++FF+++R Sbjct: 120 HPKTIVVNGILESECGELMKEFFRKKR 146 >gi|311694940|gb|ADP97813.1| cytidine/deoxycytidylate deaminase family protein [marine bacterium HP15] Length = 167 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 58/143 (40%), Positives = 75/143 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M+ AL+ A AA + E+PVGAV VL+ K I N D TAHAEI A+R Sbjct: 7 EDERWMNRALQLAGEAAAKGEVPVGAVVVLDGKEIGAGFNAPISGCDPTAHAEIRALRDA 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + LP+ LYVTLEPCTMC AI RI RL YGA PK G IE+ + Sbjct: 67 AARVGNYRLPDATLYVTLEPCTMCVGAIVHGRISRLVYGAREPKAGAIESARRTLEEPHL 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 + G+ + Q+I +FF Sbjct: 127 NWDVTAVGGVLSDQCSQVISEFF 149 >gi|184157936|ref|YP_001846275.1| cytosine/adenosine deaminase [Acinetobacter baumannii ACICU] gi|332872773|ref|ZP_08440739.1| cytidine and deoxycytidylate deaminase zinc-binding region [Acinetobacter baumannii 6014059] gi|183209530|gb|ACC56928.1| Cytosine/adenosine deaminase [Acinetobacter baumannii ACICU] gi|322508255|gb|ADX03709.1| Putative deaminase [Acinetobacter baumannii 1656-2] gi|323517881|gb|ADX92262.1| cytosine/adenosine deaminase [Acinetobacter baumannii TCDC-AB0715] gi|332739070|gb|EGJ69931.1| cytidine and deoxycytidylate deaminase zinc-binding region [Acinetobacter baumannii 6014059] Length = 167 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 77/148 (52%), Gaps = 3/148 (2%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K +M A E+A+ AA + EIPVGAV V NK+I N L D TAHAEI A Sbjct: 1 MSKFSDEYWMQLAYEQAELAAKQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQA 60 Query: 59 IRMGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 IR C L LP + LYVTLEPCTMC A+ ARI+ + +G + PK G + + Q Sbjct: 61 IRAACESLKNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLL 120 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 +H G ++ Q + FF Sbjct: 121 ENGYYNHKFTFEHGYLHEKCAQQLSLFF 148 >gi|86160056|ref|YP_466841.1| tRNA-adenosine deaminase [Anaeromyxobacter dehalogenans 2CP-C] gi|85776567|gb|ABC83404.1| tRNA-adenosine deaminase [Anaeromyxobacter dehalogenans 2CP-C] Length = 160 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 58/138 (42%), Positives = 79/138 (57%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ AA R E+PVGAVA+ +++ R N +D TAHAE+LAI+ R L Sbjct: 7 MQEALGLAREAAARGEVPVGAVALFEGRVVGRGANAREAARDPTAHAELLAIQEAARTLG 66 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L V L VTLEPC MCA A+ LARI RL YGAS+PK G + +H Sbjct: 67 RWRLTGVTLVVTLEPCAMCAGAMVLARIDRLVYGASDPKAGCTGSLQDLSADPRLNHRFP 126 Query: 128 IYPGISEQRSRQIIQDFF 145 + G+ + S ++++ FF Sbjct: 127 VERGLLAEESGELLRAFF 144 >gi|120554632|ref|YP_958983.1| CMP/dCMP deaminase, zinc-binding [Marinobacter aquaeolei VT8] gi|120324481|gb|ABM18796.1| tRNA-adenosine deaminase [Marinobacter aquaeolei VT8] Length = 167 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 57/144 (39%), Positives = 73/144 (50%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +M+ AL A+ AA E+PVGA+ V + K + N D TAHAEI A+R Sbjct: 6 KNDQYWMARALMLAERAASIGEVPVGAIVVRDGKELGVGYNAPITGCDPTAHAEIRALRD 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LYVTLEPCTMC AI +RI RL YGA PK G +E+ + A Sbjct: 66 ASARVGNYRLTGATLYVTLEPCTMCVGAIVHSRISRLVYGAREPKAGAVESARRTLDEAH 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 + E + E Q+I DFF Sbjct: 126 LNWQVEAEGSVLEGECGQVISDFF 149 >gi|119509443|ref|ZP_01628591.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nodularia spumigena CCY9414] gi|119465849|gb|EAW46738.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nodularia spumigena CCY9414] Length = 150 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 59/143 (41%), Positives = 77/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 MS AL+ AQ A E+PVGAV + +I+ NR +D TAHAEI+A+R L Sbjct: 1 MSRALDLAQIAGDAGEVPVGAVIIDAGGNMIAEGENRKERDQDPTAHAEIIALRAAANSL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA AI AR+++L YG + K G I T A +H Sbjct: 61 HNWRLNQCTLYVTLEPCPMCAGAIVQARLQQLVYGVDDTKTGAIRTVTNIPDGAASNHRL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E RQ +Q +F RR Sbjct: 121 RVMGGVLESTCRQQLQTWFANRR 143 >gi|256827679|ref|YP_003151638.1| tRNA-adenosine deaminase [Cryptobacterium curtum DSM 15641] gi|256583822|gb|ACU94956.1| tRNA-adenosine deaminase [Cryptobacterium curtum DSM 15641] Length = 206 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 54/155 (34%), Positives = 78/155 (50%), Gaps = 12/155 (7%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNN------------KIISRAGNRNRELKDV 50 + + +M AL EA++A EIP+GAV V ++I+RAGNR D Sbjct: 13 RDSEYMQMALNEARHAQGLGEIPIGAVVVYEPIDPATRRPLACPQVIARAGNRRETDADP 72 Query: 51 TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 HAE LA+R R L L +YVTLEPC MCA + ARI +GA +PK G + Sbjct: 73 AGHAEFLALREAARRLGVWRLTGCTVYVTLEPCIMCAGLMHQARIDCCVFGAFDPKAGAL 132 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + + + +HS + G+ S Q+++ FF Sbjct: 133 GSLYRIHEDERLNHSFAVRSGVCADESAQLLRSFF 167 >gi|218961251|ref|YP_001741026.1| Cytosine/adenosine deaminase [Candidatus Cloacamonas acidaminovorans] gi|167729908|emb|CAO80820.1| Cytosine/adenosine deaminase [Candidatus Cloacamonas acidaminovorans] Length = 155 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 82/148 (55%), Gaps = 1/148 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +FM A+ EA+ A +EIPVGA+ V NN II + NR+R+L + AH E L I Sbjct: 7 QNHYLFMQEAIAEAKKAFTEDEIPVGALLVKNNTIILKEHNRSRQLANPLAHCEKLLIDK 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + LYVTLEPC MCA I L++I + YGA +PK G + + + Sbjct: 67 ILTSEPGF-LYDYTLYVTLEPCLMCAGMIILSKIGTVVYGAKDPKAGVVGSLYNVLNDKS 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P + GI EQ ++++FF ++R Sbjct: 126 FNHHPVVIGGILEQECAFLLEEFFHKKR 153 >gi|152997998|ref|YP_001342833.1| zinc-binding CMP/dCMP deaminase [Marinomonas sp. MWYL1] gi|150838922|gb|ABR72898.1| CMP/dCMP deaminase zinc-binding [Marinomonas sp. MWYL1] Length = 162 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M A+ A AA NEIPVGA+ VL+ +II N L D TAHAEI AIR Sbjct: 1 MTDHE-WMERAIALAAKAASENEIPVGAIVVLDGEIIGEGYNAPISLCDPTAHAEIQAIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M C+ ++ LP LYVTLEPC+MCA A+ ARI R+ Y A+ PK G +E+ F+ Sbjct: 60 MACKTINNYRLPGATLYVTLEPCSMCAGAMVHARIDRVVYAATEPKSGIVESQGHFFEAP 119 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + + + FF+ RR Sbjct: 120 FLNHKVKVESGVLAEMASLQLTQFFQYRR 148 >gi|307729964|ref|YP_003907188.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1003] gi|307584499|gb|ADN57897.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1003] Length = 350 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 45/122 (36%), Positives = 69/122 (56%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I++ N D +AHAE++A+R +++ LP +LYVTLEPC Sbjct: 201 VPVGAVLVRGDEVIAKGFNHPISAHDPSAHAEMVALRAAAQVVENYRLPGCELYVTLEPC 260 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARI R+ +GA +PK G + + +H E+ G+ E ++ Sbjct: 261 LMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQLNHHTEVTGGVLENECGAALKS 320 Query: 144 FF 145 FF Sbjct: 321 FF 322 >gi|17232364|ref|NP_488912.1| hypothetical protein all4872 [Nostoc sp. PCC 7120] gi|17134009|dbj|BAB76571.1| all4872 [Nostoc sp. PCC 7120] Length = 147 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 61/143 (42%), Positives = 79/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 MS ALE A+ A EIPVGAV + +I+ NR +D TAHAEI+A+R +IL Sbjct: 1 MSHALELAKVAGEAGEIPVGAVITDASGHLIAEGENRKERDQDPTAHAEIVALRAATKIL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L E LYVTLEPC MCA AI +R+ +L YG + K G I A +H Sbjct: 61 QTWRLHECTLYVTLEPCPMCAGAIIHSRLGKLVYGVDDTKTGAIRTVLNIPDSAASNHRL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI E RQ +Q++F RR Sbjct: 121 QVIGGILESACRQHLQNWFVNRR 143 >gi|300811153|ref|ZP_07091665.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497857|gb|EFK32867.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 171 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 51/130 (39%), Positives = 83/130 (63%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 ++E+P+GAV V + +II + NR +D TAHAEILAI+ C+ L L + L+VT Sbjct: 24 QDEVPIGAVVVGPDGQIIGQGYNRRELDEDGTAHAEILAIKEACQKLDSWRLIDCSLFVT 83 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA AI +RI+ +Y+ A +PK G + +++ +H P++ G+ +++ Q Sbjct: 84 LEPCAMCAGAIINSRIKEVYFAAMDPKAGAAGSVVDLFSVEKFNHHPKVIRGLYKEQGAQ 143 Query: 140 IIQDFFKERR 149 +++DFF+E R Sbjct: 144 LLKDFFREIR 153 >gi|296160206|ref|ZP_06843025.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. Ch1-1] gi|295889680|gb|EFG69479.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. Ch1-1] Length = 238 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 50/144 (34%), Positives = 77/144 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM+ A A+ A E+PVGAV V +++I++ N D +AHAE++A+R Sbjct: 67 ERDRRFMALAQAAAEEARAVGEVPVGAVLVRGDEVIAKGFNHPIGAHDPSAHAEMVALRA 126 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + LP +LYVTLEPC MCA AI ARI R+ +GA +PK G + + Sbjct: 127 AAQAVENYRLPGCELYVTLEPCLMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQ 186 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 +H + G+ E ++ FF Sbjct: 187 LNHHTSVTGGVLESECGAALKSFF 210 >gi|37520622|ref|NP_923999.1| putative cytidine and deoxycytidylate deaminase [Gloeobacter violaceus PCC 7421] gi|35211616|dbj|BAC88994.1| gll1053 [Gloeobacter violaceus PCC 7421] Length = 150 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 58/150 (38%), Positives = 82/150 (54%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 MK + +M ALE A+ A E+PVGA+ V + +++ NR D TAHAEI+A+ Sbjct: 1 MKSHSEWMGMALELAREAGRVGEVPVGALVVDASGVLLATGANRRERDYDPTAHAEIVAM 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R C L L + LYVTLEPC MCA AI +R+ L YGA +PK G + + Sbjct: 61 RAACAKLRDWRLTDCTLYVTLEPCAMCAGAILQSRLGLLVYGADDPKAGAVGSVLNLPAS 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A H + GI E+ R ++ +F+E+R Sbjct: 121 AVSFHRLPVVAGIEERACRDLLCRWFEEQR 150 >gi|157826299|ref|YP_001494019.1| cytosine deaminase [Rickettsia akari str. Hartford] gi|157800257|gb|ABV75511.1| cytosine deaminase [Rickettsia akari str. Hartford] Length = 159 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 67/151 (44%), Positives = 99/151 (65%), Gaps = 2/151 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILA 58 M N FM AL++A+ A +NE+PVGAV V LN KI+ + N E + HAEI+A Sbjct: 9 MSFNNFFMEQALKQARLAFDKNEVPVGAVMVERLNQKIVINSHNNTEEKNNALYHAEIIA 68 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+ +++ Sbjct: 69 INEVCNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFN 128 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + C H PEIY GI + S ++++FF+ R Sbjct: 129 SSACFHRPEIYSGILAEDSGLLMKEFFRRIR 159 >gi|170744112|ref|YP_001772767.1| CMP/dCMP deaminase zinc-binding [Methylobacterium sp. 4-46] gi|168198386|gb|ACA20333.1| CMP/dCMP deaminase zinc-binding [Methylobacterium sp. 4-46] Length = 158 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 71/128 (55%), Positives = 95/128 (74%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGA V + +++ AGNR R L+D TAHAEILAIR CR + E L DLYVTLE Sbjct: 30 GEVPVGAAIVRDGTVLAVAGNRPRTLRDPTAHAEILAIRAACRAIGDERLIGCDLYVTLE 89 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCAAAISLAR+RRLY+ A++PKGG +E+G +F+ TCHH+PE+Y G+ E + ++ Sbjct: 90 PCGMCAAAISLARLRRLYFAAADPKGGAVEHGPRFFAQPTCHHAPEVYGGLRESEAASLL 149 Query: 142 QDFFKERR 149 ++FF+ RR Sbjct: 150 REFFRARR 157 >gi|134096850|ref|YP_001102511.1| CMP/dCMP deaminase, zinc-binding [Saccharopolyspora erythraea NRRL 2338] gi|291005105|ref|ZP_06563078.1| CMP/dCMP deaminase, zinc-binding protein [Saccharopolyspora erythraea NRRL 2338] gi|133909473|emb|CAL99585.1| CMP/dCMP deaminase, zinc-binding [Saccharopolyspora erythraea NRRL 2338] Length = 155 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 2/149 (1%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + ALE A A ++P+GAV + ++++R NR L D TAHAEILA+R Sbjct: 7 RDTELVRAALEVAPGALSTGDVPIGAVVAGPDGRVLARDHNRREALHDPTAHAEILALRA 66 Query: 62 GCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L L L VT+EPCTMCA A+ LAR+ R+ +G P+ G + + Sbjct: 67 AAGVLGDGWRLEGCTLAVTVEPCTMCAGALVLARVERVVFGCWEPRTGAVGSLWDVVRDR 126 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ E +++ FF +R Sbjct: 127 RLNHRPEVVGGVLEAECSALLEAFFHGQR 155 >gi|162446945|ref|YP_001620077.1| Zn dependent nucleoside deaminase [Acholeplasma laidlawii PG-8A] gi|161985052|gb|ABX80701.1| probable Zn dependent nucleoside deaminase [Acholeplasma laidlawii PG-8A] Length = 146 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 56/136 (41%), Positives = 78/136 (57%), Gaps = 1/136 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM+ AL+EA+ A ++E+PVGAV VL+ KII+RA N + + AHAE LAI + Sbjct: 7 EYFMNEALKEAKKANDKDEVPVGAVVVLDGKIIARAHNLRESRQSIHAHAEFLAIEKAAK 66 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L D+YVTLEPC MCA A+ ARI+ LYYGA +PK G +E+ + +H Sbjct: 67 KIGSWRLENADVYVTLEPCPMCAGAMIQARIKNLYYGAKDPKTGAVESVIKLLDNP-FNH 125 Query: 125 SPEIYPGISEQRSRQI 140 G+ + I Sbjct: 126 KIYYEGGLLMDKCSNI 141 >gi|281423636|ref|ZP_06254549.1| tRNA-specific adenosine deaminase [Prevotella oris F0302] gi|281402188|gb|EFB33019.1| tRNA-specific adenosine deaminase [Prevotella oris F0302] Length = 154 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 66/148 (44%), Positives = 87/148 (58%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +M AL EA+ AA EIP+GAV V ++IISRA N +L DVTAHAE+ AI Sbjct: 12 NKDEQYMRKALYEAERAAEEGEIPIGAVIVCKDRIISRAHNLTEKLHDVTAHAEMQAITS 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 +L + L + LYVT+EPC MCA AI A+I R+ YGAS+ K G Q Y Sbjct: 72 AADLLGGKYLSDCTLYVTVEPCVMCAGAIGWAQIGRIVYGASDEKRG-----YQLYAPRA 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E RQ++Q+FFK++R Sbjct: 127 FHPKATVTRGVLEAECRQLMQEFFKQKR 154 >gi|289665842|ref|ZP_06487423.1| hypothetical protein XcampvN_22891 [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 174 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNA-ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL A+ A +EIPVGA+ V ++ N N D +AHAEI+A+R Sbjct: 20 DLHWMQHALHLAERAERDYDEIPVGALVVDAEGNVLGEGWNFNIASHDPSAHAEIVAMRE 79 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L+ L LYVTLEPC MCA A+ ARI R+ + AS+PK G + Sbjct: 80 AGRRLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 139 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + + ++F+ +R Sbjct: 140 HNHHVRVSGGVLAAEASLRLTNYFRAKR 167 >gi|294647204|ref|ZP_06724803.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides ovatus SD CC 2a] gi|294809184|ref|ZP_06767900.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides xylanisolvens SD CC 1b] gi|292637491|gb|EFF55910.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides ovatus SD CC 2a] gi|294443578|gb|EFG12329.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides xylanisolvens SD CC 1b] Length = 145 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 79/149 (53%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM AL EA AA R E+PVGAV V +II+RA N L DVTAHAE+ I Sbjct: 1 MLDDIYFMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQVIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +L + L E LYVT+EPC MCA AI+ A+ +L +GA + K G Q Y + Sbjct: 61 AAANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEKRG-----YQKYAGS 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + GI ++++FF +R Sbjct: 116 ALHPKTVVVKGIMADECAALMKEFFAAKR 144 >gi|325106234|ref|YP_004275888.1| CMP/dCMP deaminase zinc-binding protein [Pedobacter saltans DSM 12145] gi|324975082|gb|ADY54066.1| CMP/dCMP deaminase zinc-binding protein [Pedobacter saltans DSM 12145] Length = 157 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 5/146 (3%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM A +EA A ++E+P+GA+ V N K++ R N L DVTAHAE+ A Sbjct: 15 DEFFMKEAYKEALLAFDKDEVPIGAIIVANGKVVGRGHNLTERLNDVTAHAEMQAFTSAS 74 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + + L LYVT+EPC MCA A +I R+ +GA + K G H Sbjct: 75 NTIGAKYLHNCTLYVTVEPCVMCAGASYWTQISRIVFGALDEKRG-----YSRLNPQIIH 129 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 EI G+ + ++++FF ++R Sbjct: 130 PKTEIVGGVMSEECAALMRNFFLKKR 155 >gi|299141289|ref|ZP_07034426.1| cytidine/deoxycytidylate deaminase family protein [Prevotella oris C735] gi|298577249|gb|EFI49118.1| cytidine/deoxycytidylate deaminase family protein [Prevotella oris C735] Length = 148 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 66/148 (44%), Positives = 87/148 (58%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +M AL EA+ AA EIP+GAV V ++IISRA N +L DVTAHAE+ AI Sbjct: 6 NKDEQYMRKALYEAERAAEEGEIPIGAVIVCKDRIISRAHNLTEKLHDVTAHAEMQAITS 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 +L + L + LYVT+EPC MCA AI A+I R+ YGAS+ K G Q Y Sbjct: 66 AADLLGGKYLSDCTLYVTVEPCVMCAGAIGWAQIGRIVYGASDEKRG-----YQLYAPRA 120 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E RQ++Q+FFK++R Sbjct: 121 FHPKATVTRGVLEAECRQLMQEFFKQKR 148 >gi|291521262|emb|CBK79555.1| Cytosine/adenosine deaminases [Coprococcus catus GD/7] Length = 160 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 49/145 (33%), Positives = 74/145 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM AL +A+ AA +E+P+G V V KII+R N+ + K+ +HAE+ AIR Sbjct: 1 MTEDEKFMKAALAQAKKAAAIDEVPIGCVIVYEGKIIARGYNKRNKEKNTLSHAEMNAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L +Y+TLEPC MCA AI AR+ R+ G+ N K G + Sbjct: 61 KASKYLGDWRLEGCTMYITLEPCPMCAGAIVQARVDRVVIGSMNAKAGCAGSVLNVLQER 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +H E+ + + ++ FF Sbjct: 121 RFNHQVELTKDVLHEECSSMLSGFF 145 >gi|302872965|ref|YP_003841598.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B] gi|307686520|ref|ZP_07628966.1| CMP/dCMP deaminase zinc-binding protein [Clostridium cellulovorans 743B] gi|302575822|gb|ADL49834.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B] Length = 147 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 57/146 (39%), Positives = 82/146 (56%), Gaps = 1/146 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 N F+ A+EEA+ A E+PVGAV + ++K+I+ A N K+VTAHAE+LAI+M Sbjct: 2 NNNFLKIAIEEAKKARELGEVPVGAVIIKDDKVIAAAHNLKETKKEVTAHAELLAIKMAS 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 IL L + ++YVTLEPC MCA+AI +RI+++Y G P G + + Sbjct: 62 EILDNWRLNDCEIYVTLEPCAMCASAIVQSRIKKIYIGTFEPTTGACGSVINLVQNEALN 121 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 + + II +FFKERR Sbjct: 122 SFVHVEW-LYSDECSDIITEFFKERR 146 >gi|160891295|ref|ZP_02072298.1| hypothetical protein BACUNI_03744 [Bacteroides uniformis ATCC 8492] gi|156859516|gb|EDO52947.1| hypothetical protein BACUNI_03744 [Bacteroides uniformis ATCC 8492] Length = 138 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 59/142 (41%), Positives = 78/142 (54%), Gaps = 5/142 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EA A R E+PVGAV V ++II+RA N L DVTAHAE+ AI L Sbjct: 1 MKQALLEAHKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAAAATLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L E LYVT+EPC MCA AI+ A++ RL +GA + K G Q Y H + Sbjct: 61 GKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAEDEKRG-----YQRYASQALHPKTQ 115 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + GI ++++FF +R Sbjct: 116 VVKGILADECAALMKEFFAAKR 137 >gi|262384051|ref|ZP_06077187.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|301310955|ref|ZP_07216884.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 20_3] gi|262294949|gb|EEY82881.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|300831018|gb|EFK61659.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 20_3] Length = 146 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 64/147 (43%), Positives = 83/147 (56%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL EA+ AA E+PVGAV + NN+II+RA N+ L DVTAHAE+LAI Sbjct: 5 NDEYFMKQALVEARAAASEGEVPVGAVIICNNQIIARAHNQTECLNDVTAHAEMLAITAA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L + L LYVT+EPC MCA AI A++ + YGAS+ K G + Sbjct: 65 AGVLGAKYLTNCSLYVTVEPCIMCAGAIGWAQLSTIVYGASDDKRG-----FSKFAPQAF 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H I GI E+ + +Q FFK+RR Sbjct: 120 HPKAIIKKGILEKECAEEMQRFFKQRR 146 >gi|54294609|ref|YP_127024.1| hypothetical protein lpl1685 [Legionella pneumophila str. Lens] gi|53754441|emb|CAH15925.1| hypothetical protein lpl1685 [Legionella pneumophila str. Lens] Length = 149 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 3/147 (2%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A E+A A E+PVGAV V +N+++ N + D + HAEI AIR Sbjct: 5 DKFWMQLAYEQAVIARNEGEVPVGAVLVSKDNQLLGVGRNVIEKSHDPSDHAEIRAIRQA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L+ L + LYVTLEPC MCA + ARI+RL + + K G + Sbjct: 65 SRKLNNHRLLDTTLYVTLEPCVMCAGLMVHARIKRLVFATRDFKAGAAGSIFNVL--HAL 122 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +HS I GI + Q++ DFF++ R Sbjct: 123 NHSVLIDEGIMQAECSQLLSDFFRKLR 149 >gi|170695254|ref|ZP_02886401.1| CMP/dCMP deaminase zinc-binding [Burkholderia graminis C4D1M] gi|170139874|gb|EDT08055.1| CMP/dCMP deaminase zinc-binding [Burkholderia graminis C4D1M] Length = 166 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 46/124 (37%), Positives = 68/124 (54%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I+ N D +AHAE++A+R ++ LP +LYVTLE Sbjct: 15 GEVPVGAVLVRGDEVIATGFNHPIGAHDPSAHAEMVALRAAAQVAQNYRLPGCELYVTLE 74 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI ARI R+ +GA +PK G + + +H E+ G+ E + Sbjct: 75 PCLMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQLNHHTEVTGGVLESECGAAL 134 Query: 142 QDFF 145 + FF Sbjct: 135 KSFF 138 >gi|146329465|ref|YP_001209489.1| adenosine deaminase [Dichelobacter nodosus VCS1703A] gi|146232935|gb|ABQ13913.1| adenosine deaminase [Dichelobacter nodosus VCS1703A] Length = 157 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 82/148 (55%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM ALE+AQ AA EIP+GAV V ++I+ NR D +AH+EIL +R G Sbjct: 2 NDVDFMRLALEQAQLAAEIGEIPIGAVLVYQQQVIAANFNRTISACDPSAHSEILVLREG 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L E+ LYVT+EPC MC A+ ARI +L +GA N +GG + A Sbjct: 62 AQRIKNYRLTEMALYVTVEPCVMCVGALIHARIEKLVFGAYNARGGACGSSFDLTRHAQL 121 Query: 123 HHSP-EIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + ++Q FF++RR Sbjct: 122 NHHINEVKGGVLAAECQLLLQQFFQKRR 149 >gi|301510605|ref|ZP_07235842.1| putative deaminase [Acinetobacter baumannii AB058] Length = 167 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 77/148 (52%), Gaps = 3/148 (2%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K +M A E+A+ AA + EIPVGAV V NK+I N L D TAHAEI A Sbjct: 1 MSKLSDEYWMQLAYEQAELAAKQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQA 60 Query: 59 IRMGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 IR C L LP + LYVTLEPCTMC A+ ARI+ + +G + PK G + + Q Sbjct: 61 IRAACESLKNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLL 120 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 +H G ++ Q + FF Sbjct: 121 ENGYYNHKFTFEHGCLHEKCAQQLSLFF 148 >gi|325685703|gb|EGD27782.1| cytidine/deoxycytidylate deaminase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 169 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 52/130 (40%), Positives = 83/130 (63%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 ++E+P+GAV V + +II R NR +D TAHAEILAI+ C+ L L + L+VT Sbjct: 24 QDEVPIGAVVVGPDGQIIGRGYNRRELDEDGTAHAEILAIKEACQKLDSWRLIDCSLFVT 83 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA AI +RI+ +Y+ A +PK G + +++ +H P++ G+ +++ Q Sbjct: 84 LEPCAMCAGAIINSRIKEVYFAAMDPKAGAAGSVVDLFSVEKFNHHPKVIRGLYKEQGAQ 143 Query: 140 IIQDFFKERR 149 +++DFF+E R Sbjct: 144 LLKDFFREIR 153 >gi|307610417|emb|CBW99987.1| hypothetical protein LPW_17441 [Legionella pneumophila 130b] Length = 147 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 3/147 (2%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A E+A A E+PVGAV V +N+++ N + D + HAEI AIR Sbjct: 3 DKFWMQLAYEQAVIARNEGEVPVGAVLVSKDNQLLGVGRNVIEKSHDPSDHAEIRAIRQA 62 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L+ L + LYVTLEPC MCA + ARI+RL + + K G + Sbjct: 63 SRKLNNHRLLDTTLYVTLEPCVMCAGLMVHARIKRLVFATRDFKAGAAGSMFNVL--HAL 120 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +HS I GI + Q++ DFF++ R Sbjct: 121 NHSVLIDEGIMQAECSQLLSDFFRKLR 147 >gi|212695506|ref|ZP_03303634.1| hypothetical protein ANHYDRO_00023 [Anaerococcus hydrogenalis DSM 7454] gi|212677506|gb|EEB37113.1| hypothetical protein ANHYDRO_00023 [Anaerococcus hydrogenalis DSM 7454] Length = 180 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 79/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A+ EA+ A L E+P+G V V N KII+R+ N + K HAEILAI Sbjct: 22 DDYFYMREAINEAKLARLEEEVPIGCVIVKNGKIIARSHNYTYKGKSALKHAEILAIDKA 81 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L + +YVT+EPC+MCA AI +RI RL ++ K G + T + Sbjct: 82 SKYVGDFRLEDCTMYVTMEPCSMCAGAIINSRIDRLVIALADVKRGACGSNTNITGDRSQ 141 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ + +S +I+Q FFK+ R Sbjct: 142 LHFLDAEFGLMKDQSLEILQSFFKKLR 168 >gi|28493718|ref|NP_787879.1| hypothetical protein TWT751 [Tropheryma whipplei str. Twist] gi|28572904|ref|NP_789684.1| hypothetical protein TW763 [Tropheryma whipplei TW08/27] gi|28411037|emb|CAD67422.1| conserved hypothetical protein (putative deaminase) [Tropheryma whipplei TW08/27] gi|28476760|gb|AAO44848.1| unknown [Tropheryma whipplei str. Twist] Length = 170 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 54/147 (36%), Positives = 75/147 (51%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 M AL A A + EIPVGAV N K I+ N+ E KD T HAEI+AIR Sbjct: 24 DEKIMRKALCLAHAAGEKGEIPVGAVIADVNGKTIAEGFNKREESKDPTDHAEIIAIRKA 83 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++L L + L+VT+EPCTMCA AI +RI R+ +GA N K G + + Sbjct: 84 SQMLKDWRLSGLTLFVTMEPCTMCAGAIVTSRISRVVFGAFNNKTGSVGSRIDILRDEIL 143 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 + + E+ G+ ++ FF + R Sbjct: 144 NTNIEVVSGVLISECEGVLAKFFADLR 170 >gi|323705214|ref|ZP_08116790.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacterium xylanolyticum LX-11] gi|323535640|gb|EGB25415.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacterium xylanolyticum LX-11] Length = 137 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 56/142 (39%), Positives = 73/142 (51%), Gaps = 5/142 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A++EA + E+PVGAV V + II R N KD T HAEI AI+ C+ + Sbjct: 1 MKAAIDEAIISFKLGEMPVGAVVVKDGIIIGRGYNLKETEKDATQHAEINAIKDACKSIG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L LYVTLEPC MCA AI +RI+R+Y GA + G + E Sbjct: 61 DWRLNGASLYVTLEPCPMCAGAIIESRIKRVYVGAESRDNGAAGTVYDL-----LNKKAE 115 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y GI E +++I DFF R Sbjct: 116 VYFGIMEDECKKLINDFFSRLR 137 >gi|312869691|ref|ZP_07729838.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus oris PB013-T2-3] gi|311094740|gb|EFQ53037.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lactobacillus oris PB013-T2-3] Length = 164 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 54/124 (43%), Positives = 75/124 (60%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 NE+P+GAV V +N+II R N +DVT HAE+LAI C L L + DLYVTLE Sbjct: 23 NEVPIGAVVVKDNQIIGRGHNMREHFQDVTYHAEMLAIMEACERLHSWRLEDCDLYVTLE 82 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC+ AI ARI LYYGA++PK G +++ + +H + GI + Q++ Sbjct: 83 PCIMCSGAIINARIANLYYGAADPKAGAVDSLYHLLADSRLNHQVRVESGIMQAECSQVL 142 Query: 142 QDFF 145 ++FF Sbjct: 143 KEFF 146 >gi|58039265|ref|YP_191229.1| cytosine deaminase [Gluconobacter oxydans 621H] gi|58001679|gb|AAW60573.1| Cytosine deaminase [Gluconobacter oxydans 621H] Length = 168 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 58/143 (40%), Positives = 89/143 (62%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+ A+ AA E+PVGAV + + +++ A N D +AHAE+LA+R L Sbjct: 16 MQIALQAAREAASCGEVPVGAVVLAPDGNVLAVARNHVEGAHDASAHAELLAMREAATRL 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPC+MCAAAI RI R+ +GA +PKGGG+E+G + + +C H P Sbjct: 76 KSPRLTDCTLVVTLEPCSMCAAAIVHFRIGRVVFGAYDPKGGGVEHGPRIFERPSCLHRP 135 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ + ++++ FF++ R Sbjct: 136 EVIGGVCEREASEMLKAFFRKLR 158 >gi|301165417|emb|CBW24988.1| putative nucleotide deaminase [Bacteriovorax marinus SJ] Length = 158 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 MS A++EA A +E+P+GA V I+S+ N D HAEI+AIR C+ Sbjct: 11 MSVAMDEAYKAYSIDEVPIGAAIVDESGNILSQCHNEKEHCNDPCGHAEIIAIREACKKR 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +YVTLEPC MC +A+ AR+ +L + A +PKGG I Y +H+ Sbjct: 71 GDWRLSGCTIYVTLEPCPMCLSAMIQARVDKLVFAAYDPKGGAISLNYNLYKDKRLNHNF 130 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI S +++ FF+E+R Sbjct: 131 SVVGGIGHFESSKVLSRFFREKR 153 >gi|330807694|ref|YP_004352156.1| deaminase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375802|gb|AEA67152.1| putative deaminase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 165 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL A A E+PVGAV V + +II R N D +AHAE++AIR Sbjct: 13 SRDQDFMREALALAAQGAALGEVPVGAVLVQDGEIIGRGFNCPISGHDPSAHAEMVAIRA 72 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + +S LP LYVTLEPC+MCA I +RI R+ YGA PK G +++ QF++ Sbjct: 73 AAQAVSNYRLPGSTLYVTLEPCSMCAGLIVHSRIARVVYGALEPKAGIVQSQGQFFSQGF 132 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FFK RR Sbjct: 133 LNHRVMYEGGVLAEECSTVLSEFFKARR 160 >gi|169796135|ref|YP_001713928.1| putative deaminase [Acinetobacter baumannii AYE] gi|301597400|ref|ZP_07242408.1| putative deaminase [Acinetobacter baumannii AB059] gi|169149062|emb|CAM86939.1| putative deaminase [Acinetobacter baumannii AYE] Length = 167 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 77/148 (52%), Gaps = 3/148 (2%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K +M A E+A+ AA + EIPVGAV V NK+I N L D TAHAEI A Sbjct: 1 MSKFSDEYWMQLAYEQAELAAKQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQA 60 Query: 59 IRMGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 IR C L LP + LYVTLEPCTMC A+ ARI+ + +G + PK G + + Q Sbjct: 61 IRAACESLKNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLL 120 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 +H G ++ Q + FF Sbjct: 121 ENGYYNHKFTFEHGCLHEKCAQQLSLFF 148 >gi|258645306|ref|ZP_05732775.1| zinc-binding domain protein [Dialister invisus DSM 15470] gi|260402655|gb|EEW96202.1| zinc-binding domain protein [Dialister invisus DSM 15470] Length = 151 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 84/147 (57%), Gaps = 1/147 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +MS A++EA+ A EIP+GA+ VL++ +I+ A N+ D TAHAEILAI+ Sbjct: 2 NHYDYMSLAMQEAKKALTSREIPIGAIIVLHDSVIAAAHNQCENRSDPTAHAEILAIKKA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 IL L LYVT+EPC MCA A A + + YGA NP GGI++ + Sbjct: 62 SAILGNWRLTGCSLYVTIEPCPMCAGAAVNAHLSSIIYGAPNPWYGGIDSKFRIVQNP-F 120 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ + G+ + +Q++ +FF ++R Sbjct: 121 NHAVSVIRGVCQSECQQLMDEFFDDKR 147 >gi|332851789|ref|ZP_08433714.1| cytidine and deoxycytidylate deaminase zinc-binding region [Acinetobacter baumannii 6013150] gi|332865831|ref|ZP_08436615.1| cytidine and deoxycytidylate deaminase zinc-binding region [Acinetobacter baumannii 6013113] gi|332729796|gb|EGJ61131.1| cytidine and deoxycytidylate deaminase zinc-binding region [Acinetobacter baumannii 6013150] gi|332735043|gb|EGJ66128.1| cytidine and deoxycytidylate deaminase zinc-binding region [Acinetobacter baumannii 6013113] Length = 170 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 77/148 (52%), Gaps = 3/148 (2%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K +M A E+A+ AA + EIPVGAV V NK+I N L D TAHAEI A Sbjct: 1 MSKFSDEYWMQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQA 60 Query: 59 IRMGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 IR C L LP + LYVTLEPCTMC A+ ARI+ + +G + PK G + + Q Sbjct: 61 IRAACESLKNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLL 120 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 +H G ++ Q + FF Sbjct: 121 ENGYYNHKFTFEHGCLHEKCAQQLSLFF 148 >gi|260555185|ref|ZP_05827406.1| cytosine/adenosine deaminase [Acinetobacter baumannii ATCC 19606] gi|260411727|gb|EEX05024.1| cytosine/adenosine deaminase [Acinetobacter baumannii ATCC 19606] Length = 167 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 77/148 (52%), Gaps = 3/148 (2%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K +M A E+A+ AA + EIPVGAV V NK+I N L D TAHAEI A Sbjct: 1 MSKFSDEYWMQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQA 60 Query: 59 IRMGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 IR C L LP + LYVTLEPCTMC A+ ARI+ + +G + PK G + + Q Sbjct: 61 IRAACESLKNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLL 120 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 +H G ++ Q + FF Sbjct: 121 ENGYYNHKFTFEHGCLHEKCAQQLSLFF 148 >gi|88607031|ref|YP_504931.1| cytidine and deoxycytidylate deaminase family protein [Anaplasma phagocytophilum HZ] gi|88598094|gb|ABD43564.1| cytidine and deoxycytidylate deaminase family protein [Anaplasma phagocytophilum HZ] Length = 147 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 76/145 (52%), Positives = 97/145 (66%), Gaps = 4/145 (2%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + +M A+EEA ++ EIPVGA+ V N II++A N + D TAHAEI+AIRM C+ Sbjct: 4 SAYMKIAMEEANSS--SGEIPVGALVVRNGVIIAKAHNLTIQNTDPTAHAEIVAIRMACK 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 LS IL D+YVTLEPC MC AISLARIRR+Y+GA N K GGIENG Q C H Sbjct: 62 ALSTHILDGCDIYVTLEPCAMCTQAISLARIRRIYFGACNEKLGGIENGAQVL--KYCLH 119 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 PE+Y G EQ + ++++ FFK+ R Sbjct: 120 VPEVYGGFLEQENAELLKAFFKKMR 144 >gi|107103282|ref|ZP_01367200.1| hypothetical protein PaerPA_01004351 [Pseudomonas aeruginosa PACS2] Length = 182 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 61/148 (41%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL EA+ AA E+PVGAV V +II R NR D +AHAE+LAIRM Sbjct: 26 SRDPHFMREALAEAEKAAALGEVPVGAVLVREGEIIGRGFNRPISSHDPSAHAEMLAIRM 85 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 LP LYVTLEPC+MC+ + ARI+RL YG PK G +E+ +F+ Sbjct: 86 AAAEAGNYRLPGSTLYVTLEPCSMCSGLLVHARIQRLVYGTVEPKSGAVESRGRFFEQEH 145 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + Q++ FF+ RR Sbjct: 146 LNHRVMVEGGVLAEECSQVLSAFFRARR 173 >gi|289669069|ref|ZP_06490144.1| hypothetical protein XcampmN_11383 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 174 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNA-ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL A+ A +EIPVGA+ V ++ N N D +AHAEI+A+R Sbjct: 20 DLHWMQHALHLAERAERDYDEIPVGALVVDAEGNVLGEGWNFNIASHDPSAHAEIVAMRE 79 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L+ L LYVTLEPC MCA A+ ARI R+ + AS+PK G + Sbjct: 80 AGRRLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 139 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + + ++F+ +R Sbjct: 140 HNHHVRVSGGVLAAEASLRLTNYFRAKR 167 >gi|66044515|ref|YP_234356.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. syringae B728a] gi|63255222|gb|AAY36318.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. syringae B728a] Length = 169 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM AL A AL E+PVGAV V N +II R N D +AHAE++AIR Sbjct: 10 SKDQDFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRD 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ A Sbjct: 70 AAKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 130 LNHRVLFEGGVLGEECGTMLSEFFRMRR 157 >gi|197124086|ref|YP_002136037.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter sp. K] gi|196173935|gb|ACG74908.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter sp. K] Length = 183 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 57/138 (41%), Positives = 79/138 (57%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ AA R E+PVGAVA+ +++ R N +D TAHAE+LAI+ R L Sbjct: 30 MQEALGLAREAAARGEVPVGAVALFEGRVVGRGANAREAARDPTAHAELLAIQEAARTLG 89 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L V + VTLEPC MCA A+ LARI RL YGAS+PK G + +H Sbjct: 90 RWRLTGVTVVVTLEPCAMCAGAMVLARIDRLVYGASDPKAGCTGSLQDLSADPRLNHRFP 149 Query: 128 IYPGISEQRSRQIIQDFF 145 + G+ + S ++++ FF Sbjct: 150 VERGLLAEESGELLRAFF 167 >gi|294669183|ref|ZP_06734263.1| tRNA-specific adenosine deaminase [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308815|gb|EFE50058.1| tRNA-specific adenosine deaminase [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 246 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 82/143 (57%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL +A+ AA E+PVGAV V N +++S A NR D+ +HAE+ A+ R Sbjct: 95 FMQLALHQAEAAAAAGEVPVGAVVVRNGEVLSTAHNRCVADCDIGSHAELRALAEAGRQT 154 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L D+Y+TLEPC MCA+A+ AR+ R+ YGA+ PK G + ++ + Sbjct: 155 GSYRLDGCDVYITLEPCAMCASALIQARVARVVYGAAEPKSGAAGSVVDLFSDGRLNKHT 214 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ GI + + ++Q FF++RR Sbjct: 215 AVFGGILAEDCQAVLQHFFRQRR 237 >gi|193215821|ref|YP_001997020.1| CMP/dCMP deaminase [Chloroherpeton thalassium ATCC 35110] gi|193089298|gb|ACF14573.1| CMP/dCMP deaminase zinc-binding [Chloroherpeton thalassium ATCC 35110] Length = 161 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A EA+ A +NE+PVGAV N I+ R N+ L D TAHAE++A+ L Sbjct: 12 MEMAFREAEKAFEKNEVPVGAVVFDSNGAIVGRGFNQVEMLCDTTAHAEMIALTSAMNTL 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L VT+EPC MCA A+ A++ RL +G+ + K G T +H Sbjct: 72 GDKYLTDCTLAVTMEPCPMCAGAMVNAKLGRLIFGSYDAKMGAAGTVFNLTTSKFLNHQM 131 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ GI E+++ +I++ FF ++R Sbjct: 132 EVIGGILEEKTTEILKSFFAQKR 154 >gi|289677917|ref|ZP_06498807.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. syringae FF5] gi|330895911|gb|EGH28196.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. japonica str. M301072PT] Length = 170 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL A AL E+PVGAV V N +II R N D +AHAE++AIR Sbjct: 11 SNDQYFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRD 70 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ A Sbjct: 71 AAKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAF 130 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 131 LNHRVLFEGGVLGEECGTMLSEFFRMRR 158 >gi|71736711|ref|YP_273597.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|289625949|ref|ZP_06458903.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647891|ref|ZP_06479234.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. aesculi str. 2250] gi|71557264|gb|AAZ36475.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320323193|gb|EFW79282.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. glycinea str. B076] gi|320329536|gb|EFW85525.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330867510|gb|EGH02219.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330874802|gb|EGH08951.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 169 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM AL A AL E+PVGAV V N +II R N D +AHAE++AIR Sbjct: 10 SKDQDFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISASDPSAHAEMVAIRD 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ Sbjct: 70 AARALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 130 LNHRVLFEGGVLSEECGAMLSEFFRMRR 157 >gi|298373649|ref|ZP_06983638.1| tRNA-specific adenosine deaminase [Bacteroidetes oral taxon 274 str. F0058] gi|298274701|gb|EFI16253.1| tRNA-specific adenosine deaminase [Bacteroidetes oral taxon 274 str. F0058] Length = 143 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 76/147 (51%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL EA A E+P+GAV V II++A N L DVTAHAE+ A+ M Sbjct: 2 TDVYFMQQALREAAYAFDEGEVPIGAVVVCAGNIIAKAHNLTERLNDVTAHAEMQAVTMA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L + LYVTLEPC MCA A++ A I R+ +GA + K G + Sbjct: 62 ANYLGGKYLNDCTLYVTLEPCVMCAGALAWAHIGRVVFGAYDDKRG-----FGRFAPKAL 116 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ Q +I+Q FF +R Sbjct: 117 HTKTELVGGVMAQECGEILQRFFSTKR 143 >gi|219684000|ref|YP_002470383.1| cytidine and deoxycytidylate deaminase [Bifidobacterium animalis subsp. lactis AD011] gi|219621650|gb|ACL29807.1| possible cytidine and deoxycytidylate deaminase [Bifidobacterium animalis subsp. lactis AD011] Length = 152 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 50/150 (33%), Positives = 73/150 (48%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 M + M AL +A+ A ++PVGAV + + ++I R N D AHAEI+A+ Sbjct: 1 MTQYAEAMGEALAQARMARSAGDVPVGAVVLDAHGEVIGRGRNLRERDADPLAHAEIVAM 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + L + L VTLEPC MCA A RI R+ +G + K G + Sbjct: 61 REAAAVRGNWNLADCTLVVTLEPCPMCAGACLQTRIGRIVFGGWDAKLGACGSVWDIPRD 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H PE+Y G+ E+ ++ +FF RR Sbjct: 121 PHVGHEPEVYGGVCERECTALLAEFFHSRR 150 >gi|104774442|ref|YP_619422.1| cytosine/adenosine deaminase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514541|ref|YP_813447.1| cytosine/adenosine deaminase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103423523|emb|CAI98425.1| Cytosine/adenosine deaminase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093856|gb|ABJ59009.1| tRNA-adenosine deaminase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126252|gb|ADY85582.1| Cytidine-deoxycytidylate deaminase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 169 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 52/130 (40%), Positives = 84/130 (64%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 ++E+P+GAV V + +II R NR +D TAHAEILAI+ C+ L L + +L+VT Sbjct: 24 QDEVPIGAVVVGPDGQIIGRGYNRRELDEDGTAHAEILAIKEACQKLDSWRLIDCNLFVT 83 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA AI +RI+ +Y+ A +PK G + +++ +H P++ G+ +++ Q Sbjct: 84 LEPCAMCAGAIINSRIKEVYFAAMDPKAGAAGSVVDLFSVEKFNHHPKVIRGLYKEQGAQ 143 Query: 140 IIQDFFKERR 149 +++DFF+E R Sbjct: 144 LLKDFFREIR 153 >gi|152112361|sp|Q1RGK7|Y1426_RICBR RecName: Full=Uncharacterized deaminase RBE_1426 Length = 145 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 68/144 (47%), Positives = 97/144 (67%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL++A+ A +NE+PVGAV V N KIIS++ N E + HAEI+AI CRI Sbjct: 1 MREALKQAEIAFSKNEVPVGAVIVDRENQKIISKSYNNTEEKNNALYHAEIIAINEACRI 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 +S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+ +++ C H Sbjct: 61 ISSKNLSDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSKACFHR 120 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PEIY GI + S +++ FFK+ R Sbjct: 121 PEIYSGIFAEDSALLMKGFFKKIR 144 >gi|159035903|ref|YP_001535156.1| CMP/dCMP deaminase zinc-binding [Salinispora arenicola CNS-205] gi|157914738|gb|ABV96165.1| CMP/dCMP deaminase zinc-binding [Salinispora arenicola CNS-205] Length = 165 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 51/151 (33%), Positives = 77/151 (50%), Gaps = 6/151 (3%) Query: 2 KKGNVFMSCALEEAQNAAL-----RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAE 55 ++ ++M ALE A A ++IPVGAV + + ++ N D TAHAE Sbjct: 15 QRHELWMRRALEVAVTGADPTVTVVDDIPVGAVLLGPDGTELATGRNERELTGDPTAHAE 74 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +LA+R L + L L VTLEPCTMCA A+ LAR+ + +GA PK G + Sbjct: 75 VLALRRAAGRLGRWRLDGCTLVVTLEPCTMCAGALVLARVSTVVFGAWEPKTGAAGSLWD 134 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 +H PE+Y G+ + +++ FF+ Sbjct: 135 VLRDRRLNHRPEVYGGVLATETAAVLRAFFR 165 >gi|148359260|ref|YP_001250467.1| deaminase [Legionella pneumophila str. Corby] gi|296107307|ref|YP_003619007.1| Cytosine/adenosine deaminase [Legionella pneumophila 2300/99 Alcoy] gi|148281033|gb|ABQ55121.1| deaminase [Legionella pneumophila str. Corby] gi|295649208|gb|ADG25055.1| Cytosine/adenosine deaminase [Legionella pneumophila 2300/99 Alcoy] Length = 147 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 74/147 (50%), Gaps = 3/147 (2%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A E+A A E+PVGAV V +N+++ N + D + HAEI AIR Sbjct: 3 DKFWMQLAYEQAVIARNEGEVPVGAVLVSKDNQLLGVGRNVIEKSHDPSDHAEIRAIRQA 62 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L+ L + LYVTLEPC MCA + ARI+RL + + K G + Sbjct: 63 SRKLNNHRLLDTTLYVTLEPCVMCAGLMVHARIKRLVFATRDFKAGAAGSMFNVL--HAL 120 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +HS I GI + Q++ DFF+ R Sbjct: 121 NHSVLIDEGIMQAECSQLLSDFFRNLR 147 >gi|295676796|ref|YP_003605320.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1002] gi|295436639|gb|ADG15809.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1002] Length = 249 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 45/122 (36%), Positives = 66/122 (54%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I+ N D +AHAE++A+R + L LP +LYVTLEPC Sbjct: 79 VPVGAVLVRGDEVIATGFNHPIGAHDPSAHAEMVALRAAAQSLENYRLPGCELYVTLEPC 138 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARI R+ +GA +PK G + + +H + G+ E ++ Sbjct: 139 LMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPRLNHHTTVSGGVLEAECGAALRS 198 Query: 144 FF 145 FF Sbjct: 199 FF 200 >gi|330975928|gb|EGH75994.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 169 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL A AL E+PVGAV V N +II R N D +AHAE++AIR Sbjct: 10 SNDRYFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRD 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ A Sbjct: 70 AAKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 130 LNHRVVFEGGVLGEECGTMLSEFFRMRR 157 >gi|199599026|ref|ZP_03212433.1| Cytosine/adenosine deaminase [Lactobacillus rhamnosus HN001] gi|199590062|gb|EDY98161.1| Cytosine/adenosine deaminase [Lactobacillus rhamnosus HN001] Length = 170 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 61/145 (42%), Positives = 81/145 (55%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N +MS AL EA+ AA E+P+GAV V + +II R N +D T HAEILAI+ CR Sbjct: 9 NQYMSAALAEAKKAAAIGEVPIGAVVVHDQQIIGRGYNLRETTQDATQHAEILAIQAACR 68 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L + L+VTLEPC MCA A+ ARI Y+GA++PK G +H Sbjct: 69 QLGTWRLEDCSLFVTLEPCPMCAGAMINARIATCYFGATDPKAGVAGTFYNLLEDTRFNH 128 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + PGI S ++Q+FF+ R Sbjct: 129 QVAVVPGIQATASAALLQEFFRAIR 153 >gi|270284659|ref|ZP_05966459.2| cytidine/deoxycytidylate deaminase family protein [Bifidobacterium gallicum DSM 20093] gi|270276606|gb|EFA22460.1| cytidine/deoxycytidylate deaminase family protein [Bifidobacterium gallicum DSM 20093] Length = 170 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 46/142 (32%), Positives = 64/142 (45%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+ +A A ++P+G V ++I R N D AHAEI A+R L Sbjct: 28 MESAIAQALQAKQHGDVPIGACVLDAGGRVIGRGHNMRERNLDPLAHAEIEAMREAAATL 87 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPC MCA A + R+ +GA + K G + P Sbjct: 88 GSWNLEDCTLVVTLEPCPMCAGACLQTHVGRIVFGAWDAKLGACGSVWDLPRDPHIGAHP 147 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 E+Y GI E Q++ FF+ R Sbjct: 148 EVYGGIRESECAQLLTAFFRLR 169 >gi|254502430|ref|ZP_05114581.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Labrenzia alexandrii DFL-11] gi|222438501|gb|EEE45180.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Labrenzia alexandrii DFL-11] Length = 155 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 74/129 (57%), Positives = 94/129 (72%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 R E+PVGAV V N +I++R GNR EL D TAHAE+L IR C L + LP+ DLYVTL Sbjct: 27 RGEVPVGAVLVRNGEIVARDGNRTLELNDPTAHAEVLVIRAACAALQSQRLPKCDLYVTL 86 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA AIS ARIRRLYYGA + KGG +++GT+F+ CHH+PE Y GI E++S + Sbjct: 87 EPCAMCAGAISFARIRRLYYGAGDEKGGAVDHGTRFFHQPICHHAPETYAGIGERQSAAL 146 Query: 141 IQDFFKERR 149 ++ FF+ RR Sbjct: 147 LKAFFQGRR 155 >gi|325917446|ref|ZP_08179655.1| tRNA-adenosine deaminase [Xanthomonas vesicatoria ATCC 35937] gi|325536320|gb|EGD08107.1| tRNA-adenosine deaminase [Xanthomonas vesicatoria ATCC 35937] Length = 171 Score = 190 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 77/148 (52%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNA-ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL+ A+ A +EIPVGAV + +++ N N D +AHAEI+A+R Sbjct: 17 DTHWMQHALQLAERAERDYDEIPVGAVLIDAEGQVLGEGWNYNIASHDPSAHAEIMAMRE 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G R L+ L LYVTLEPC MCA A+ ARI R+ + AS+PK G + Sbjct: 77 GGRRLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + + ++F+ +R Sbjct: 137 HNHRVHVAGGVLAAEASLRLTNYFRAKR 164 >gi|158522041|ref|YP_001529911.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3] gi|158510867|gb|ABW67834.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3] Length = 146 Score = 190 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 58/143 (40%), Positives = 79/143 (55%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA A +E+PVGAV V + K++S NR D +AHAE+L IR R Sbjct: 1 MELALVEAGKARDMDEVPVGAVLVSPDGKVLSADHNRPIAECDPSAHAEMLVIRRAARQA 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + LP LYVT+EPC MC A+ ARI + +G +PK G + F + +HSP Sbjct: 61 ANYRLPNTTLYVTVEPCVMCMGAVIHARIGTVVFGVHDPKWGAAGSLYDFTKHSALNHSP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E R I+Q FF++RR Sbjct: 121 AVVAGVCEDACRSILQAFFEQRR 143 >gi|313124289|ref|YP_004034548.1| nucleoside deaminase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280852|gb|ADQ61571.1| Nucleoside deaminase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 169 Score = 190 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 52/130 (40%), Positives = 82/130 (63%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 ++E+P+GAV V + +II R NR +D TAHAEILAI+ C+ L L + L+VT Sbjct: 24 QDEVPIGAVVVGPDGQIIGRGYNRRELDEDGTAHAEILAIKEACQKLDSWRLIDCSLFVT 83 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA AI +RI+ +Y+ A +PK G + +++ +H PE+ G+ +++ Sbjct: 84 LEPCAMCAGAIINSRIKEVYFAAMDPKAGAAGSVVDLFSVEKFNHHPEVIRGLYKEQGAL 143 Query: 140 IIQDFFKERR 149 +++DFF+E R Sbjct: 144 LLKDFFREIR 153 >gi|311745177|ref|ZP_07718962.1| cytidine/deoxycytidylate deaminase family protein [Algoriphagus sp. PR1] gi|311302345|gb|EAZ81919.2| cytidine/deoxycytidylate deaminase family protein [Algoriphagus sp. PR1] Length = 147 Score = 190 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 60/145 (41%), Positives = 88/145 (60%), Gaps = 5/145 (3%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M+ AL++A+ A EIPVGAV VL N+II+RA N+ +L DVTAHAE+LAI Sbjct: 7 EYYMNEALKQAKIAFEEGEIPVGAVIVLKNRIIARAYNQTEKLNDVTAHAEMLAITSAAN 66 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + L + LYVTLEPCTMCA A+ ++I ++Y A + K G ++ + H Sbjct: 67 YMGAKYLNDCKLYVTLEPCTMCAGALFWSQIGEVHYAAQDEKRGYRKSNPEI-----LHP 121 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 +++ G + S Q+I DFFK+ R Sbjct: 122 KTKVFQGPFREESEQLILDFFKKLR 146 >gi|54297635|ref|YP_124004.1| hypothetical protein lpp1686 [Legionella pneumophila str. Paris] gi|53751420|emb|CAH12838.1| hypothetical protein lpp1686 [Legionella pneumophila str. Paris] Length = 149 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 74/147 (50%), Gaps = 3/147 (2%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A E+A A E+PVGAV V +N+++ N + D + HAEI AIR Sbjct: 5 DKFWMQLAYEQAVIARNEGEVPVGAVLVSKDNQLLGVGRNVIEKSHDPSDHAEIRAIRQA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L+ L + LYVTLEPC MCA + ARI+RL + + K G + Sbjct: 65 SRKLNNHRLLDTTLYVTLEPCVMCAGLMVHARIKRLVFATRDFKAGAAGSMFNVL--HAL 122 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +HS I GI + Q++ DFF+ R Sbjct: 123 NHSVLIDEGIMQAECSQLLSDFFRNLR 149 >gi|149200864|ref|ZP_01877839.1| hypothetical protein RTM1035_14602 [Roseovarius sp. TM1035] gi|149145197|gb|EDM33223.1| hypothetical protein RTM1035_14602 [Roseovarius sp. TM1035] Length = 153 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 80/144 (55%), Positives = 100/144 (69%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL+EA+ AA R E+PVGAV V I +RAGNR REL D TAHAEILAIR C Sbjct: 6 YMDIALDEARAAAARGEVPVGAVIVTPSGAIAARAGNRTRELSDPTAHAEILAIRAACAA 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L E LP DLYVTLEPC MCA+AI+ RI RLYYGA++PK GG+ G + ++ CHH Sbjct: 66 LGSERLPGHDLYVTLEPCAMCASAIAATRIARLYYGAADPKSGGVAMGARVFSHPQCHHV 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PEIY GI+ + +++ FF++RR Sbjct: 126 PEIYDGIAATEAETLLKTFFRDRR 149 >gi|183602639|ref|ZP_02964003.1| possible cytidine and deoxycytidylate deaminase [Bifidobacterium animalis subsp. lactis HN019] gi|241191605|ref|YP_002968999.1| Cytosine/adenosine deaminase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241197010|ref|YP_002970565.1| Cytosine/adenosine deaminase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218057|gb|EDT88704.1| possible cytidine and deoxycytidylate deaminase [Bifidobacterium animalis subsp. lactis HN019] gi|240249997|gb|ACS46937.1| Cytosine/adenosine deaminase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251564|gb|ACS48503.1| Cytosine/adenosine deaminase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295794597|gb|ADG34132.1| Cytosine/adenosine deaminase [Bifidobacterium animalis subsp. lactis V9] Length = 169 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 50/150 (33%), Positives = 73/150 (48%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 M + M AL +A+ A ++PVGAV + + ++I R N D AHAEI+A+ Sbjct: 18 MTQYAEAMGEALAQARMARSAGDVPVGAVVLDAHGEVIGRGRNLRERDADPLAHAEIVAM 77 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + L + L VTLEPC MCA A RI R+ +G + K G + Sbjct: 78 REAAAVRGNWNLADCTLVVTLEPCPMCAGACLQTRIGRIVFGGWDAKLGACGSVWDIPRD 137 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H PE+Y G+ E+ ++ +FF RR Sbjct: 138 PHVGHEPEVYGGVCERECTALLAEFFHSRR 167 >gi|149278271|ref|ZP_01884409.1| putative cytosine/adenosine deaminase [Pedobacter sp. BAL39] gi|149231037|gb|EDM36418.1| putative cytosine/adenosine deaminase [Pedobacter sp. BAL39] Length = 157 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M ALEEA A + E+P+GA+ V +I+ R N +L DVTAHAE+ A Sbjct: 15 EDEHYMRLALEEANKAYVAEEVPIGAIVVCKGRIVGRGYNLTEQLNDVTAHAEMQAFTAA 74 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L + L + +YVT+EPC MCA A ++ RL YGA+ PK G G + Sbjct: 75 AQTLGGKYLKDCTIYVTVEPCVMCAGASYWMQVGRLVYGATEPKRGFTSRGAKL-----L 129 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ + ++ FF +R Sbjct: 130 HPKTILKAGVLAEECGALMTRFFANKR 156 >gi|330969043|gb|EGH69109.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. aceris str. M302273PT] Length = 169 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM AL A AL E+PVGAV V N +I+ R N D +AHAE++AIR Sbjct: 10 SKDQYFMHEALALAAQGALLGEVPVGAVVVQNGEIVGRGYNCPISGSDPSAHAEMVAIRD 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ A Sbjct: 70 AAKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVTRVVYGALEPKAGIVQSQGQFFSQAF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 130 LNHRVLFEGGVLGEECGTMLSEFFRMRR 157 >gi|325292072|ref|YP_004277936.1| cytidine and deoxycytidylate deaminase [Agrobacterium sp. H13-3] gi|325059925|gb|ADY63616.1| cytidine and deoxycytidylate deaminase [Agrobacterium sp. H13-3] Length = 152 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 87/149 (58%), Positives = 113/149 (75%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM AL EA+ A R E+P+GAV V++ ++I+R+GNR REL DVTAHAEI IR Sbjct: 1 MAERTHFMELALAEARAAGERQEVPIGAVLVMDGRVIARSGNRTRELNDVTAHAEIAVIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M C L QE LP DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG + +G +F++ Sbjct: 61 MACEALEQERLPGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVHSGVRFFSQP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 TCHH+P++Y G++E S +I++ FF+E+R Sbjct: 121 TCHHAPDVYSGLAESESAEILRKFFREKR 149 >gi|291542828|emb|CBL15938.1| tRNA-adenosine deaminase [Ruminococcus bromii L2-63] Length = 152 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 84/149 (56%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K +M A+E+A+ AA NE+PVGAV V N++I++ NR + K+ HAE AI Sbjct: 1 MDKTLYYMQKAIEQAEIAAAENEVPVGAVIVRNDEIVATGRNRREQGKNALLHAETDAIY 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L ++YVTLEPC MCA AI A I ++Y+GA + K G T + + Sbjct: 61 NACQKLGGWRLWNCEIYVTLEPCPMCAGAIINAHIPKVYFGAYDLKNGACGTITNLFQMP 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + PE GI ++ +++ DFFK R Sbjct: 121 -FNFKPESVGGIMQEECSKLLTDFFKNLR 148 >gi|296271485|ref|YP_003654117.1| CMP/dCMP deaminase zinc-binding protein [Thermobispora bispora DSM 43833] gi|296094272|gb|ADG90224.1| CMP/dCMP deaminase zinc-binding protein [Thermobispora bispora DSM 43833] Length = 152 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 58/151 (38%), Positives = 79/151 (52%), Gaps = 2/151 (1%) Query: 1 MKKG-NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58 M + M AL EA A R E+PVGAV + + +++ AGN D TAHAE+LA Sbjct: 1 MTQDYEPAMRLALAEAVRAGERGEVPVGAVVLGPDGTVLAAAGNDREASGDPTAHAEVLA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +R R L L L VTLEPCTMCA A LAR+ R+ YGA++ K G + Sbjct: 61 LRAAARALGTWRLSGCTLVVTLEPCTMCAGAAVLARVDRVVYGAADEKAGAAGSLWDVLR 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ + +++ FF RR Sbjct: 121 DRRLNHRPEVVLGVLAEECGAVLRSFFAGRR 151 >gi|320102361|ref|YP_004177952.1| tRNA-adenosine deaminase [Isosphaera pallida ATCC 43644] gi|319749643|gb|ADV61403.1| tRNA-adenosine deaminase [Isosphaera pallida ATCC 43644] Length = 185 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 2/139 (1%) Query: 5 NVF-MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62 + + M+ AL+ A+ A E+PVGAV + +++++A N L+D TAHAE L + Sbjct: 20 DYWAMTRALDLARAAVDLGEVPVGAVVLDPLGRLLAQAHNLRETLEDPTAHAERLVLTWA 79 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L L LYVTLEPC MCA AI LAR+ R+ Y ++PK G + + + Sbjct: 80 ARGLGTWRLEGCTLYVTLEPCVMCAGAIVLARVARVVYATNDPKAGACSSLYRILDDSRL 139 Query: 123 HHSPEIYPGISEQRSRQII 141 +H P++ G+ + + ++ Sbjct: 140 NHRPQVEYGLFAREAGDLL 158 >gi|169633380|ref|YP_001707116.1| putative deaminase [Acinetobacter baumannii SDF] gi|169152172|emb|CAP01075.1| putative deaminase [Acinetobacter baumannii] Length = 166 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 77/148 (52%), Gaps = 3/148 (2%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K +M A E+A+ AA + EIPVGAV V NK+I N L D TAHAEI A Sbjct: 1 MSKFSDEYWMQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQA 60 Query: 59 IRMGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 IR C L LP + LYVTLEPCTMC A+ ARI+ + +G + PK G + + Q Sbjct: 61 IRAACESLKNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLL 120 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 +H G ++ Q + FF Sbjct: 121 ENGYYNHKFTFEHGCLHEKCAQQLSLFF 148 >gi|281358294|ref|ZP_06244776.1| CMP/dCMP deaminase zinc-binding [Victivallis vadensis ATCC BAA-548] gi|281315121|gb|EFA99152.1| CMP/dCMP deaminase zinc-binding [Victivallis vadensis ATCC BAA-548] Length = 434 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 1/150 (0%) Query: 1 MKK-GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M FM AL+EA+NAA E+PVGAVAV + ++++ A NR E +HAEI + Sbjct: 1 MNDSDPAFMRLALDEARNAAAAGEVPVGAVAVRDGRVLATARNRVEERHSAVSHAEIELL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + + E+ Y+T EPC MCA A+ AR R+ +G ++P+ GG + Sbjct: 61 HAVEAVTGDWRMDEITFYITKEPCPMCAGALVNARAGRIVFGLADPRMGGCGSALDITGH 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 PE+ G+ + +++II++FF+ R Sbjct: 121 PGVLWHPEVEGGVLAEEAQRIIREFFRNSR 150 >gi|297572271|ref|YP_003698045.1| CMP/dCMP deaminase zinc-binding protein [Arcanobacterium haemolyticum DSM 20595] gi|296932618|gb|ADH93426.1| CMP/dCMP deaminase zinc-binding protein [Arcanobacterium haemolyticum DSM 20595] Length = 143 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+E A+ A ++PVGAV + + +I R N D HAE+ A+R R L Sbjct: 1 MHEAMEIARRAGADGDVPVGAVILGPDGGVIGRGWNTREADADPCGHAEVNALREAARAL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPCTMCA AI +R+ R+ +GA + K G + A +H Sbjct: 61 GRWNLSGCTLVVTLEPCTMCAGAIVNSRVSRVVFGAWDAKAGAAGSVRDVLRDARLNHVV 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E + I+QD+F+ RR Sbjct: 121 EVIGGLCEAENVAILQDWFEARR 143 >gi|293605714|ref|ZP_06688091.1| cytidine/deoxycytidylate deaminase [Achromobacter piechaudii ATCC 43553] gi|292815893|gb|EFF74997.1| cytidine/deoxycytidylate deaminase [Achromobacter piechaudii ATCC 43553] Length = 169 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 49/138 (35%), Positives = 73/138 (52%), Gaps = 1/138 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + ++ AL+EAQ A E+PVGA+ V +I+ R NR D TAHAEI+A+R Sbjct: 16 EDARYIELALQEAQAAYEIGEVPVGALVVSAQGEILGRGYNRTIIDHDPTAHAEIVALRN 75 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L LP + +YVTLEPC MC A+ AR+ R+ +GA +PK G + ++ Sbjct: 76 AARRLENYRLPGITVYVTLEPCVMCIGAMLHARLARVVFGAYDPKTGACGSVLDVGSVPK 135 Query: 122 CHHSPEIYPGISEQRSRQ 139 +H + G+ + Sbjct: 136 LNHHTSVTGGVLAEPCGD 153 >gi|298488260|ref|ZP_07006293.1| tRNA-specific adenosine-34 deaminase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157199|gb|EFH98286.1| tRNA-specific adenosine-34 deaminase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 169 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM AL A AL E+PVGAV V N +II R N D +AHAE++AIR Sbjct: 10 SKDQDFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISASDPSAHAEMVAIRD 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L L LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ Sbjct: 70 AARALDNYRLSGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 130 LNHRVLFEGGVLGEECGAMLSEFFRMRR 157 >gi|294813865|ref|ZP_06772508.1| cytidine/deoxycytidine deaminase [Streptomyces clavuligerus ATCC 27064] gi|326442283|ref|ZP_08217017.1| deaminase [Streptomyces clavuligerus ATCC 27064] gi|294326464|gb|EFG08107.1| cytidine/deoxycytidine deaminase [Streptomyces clavuligerus ATCC 27064] Length = 199 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 1/128 (0%) Query: 22 NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PVGAV + + ++ N D TAHAE+LAIR R + L + L VTL Sbjct: 72 GDVPVGAVVLAADGTRLATGHNERELTGDPTAHAEVLAIRRAARRIGGWRLSDCTLVVTL 131 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA AI+ +R+ R+ YGA + K G + + +H PE+ G+ E ++ Sbjct: 132 EPCTMCAGAITQSRVGRVVYGARDEKAGAVGSLWDVVRDRRLNHRPEVIIGVLEPECARL 191 Query: 141 IQDFFKER 148 + DFF+ R Sbjct: 192 MTDFFRHR 199 >gi|134295996|ref|YP_001119731.1| tRNA-adenosine deaminase [Burkholderia vietnamiensis G4] gi|134139153|gb|ABO54896.1| tRNA-adenosine deaminase [Burkholderia vietnamiensis G4] Length = 197 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 76/143 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A A+ A E+PVGAV V +++I+R N D +AHAE+ A+RM Sbjct: 34 RDLHFMRLAQAAAEEARAAGEVPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMA 93 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L +P +LYVTLEPC MCA AI ARI R+ YGA++PK G + + Sbjct: 94 AQHLQNYRMPGCELYVTLEPCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQL 153 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 +H E+ G+ ++ FF Sbjct: 154 NHHTEVTGGVLADECGAALKSFF 176 >gi|146283335|ref|YP_001173488.1| cytidine/deoxycytidylate deaminase [Pseudomonas stutzeri A1501] gi|145571540|gb|ABP80646.1| cytidine/deoxycytidylate deaminase [Pseudomonas stutzeri A1501] Length = 145 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 49/127 (38%), Positives = 74/127 (58%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V +I+ R N D +AHAE++AIR + L LP LYVTLEP Sbjct: 16 EVPVGAVLVHEGQIVGRGFNCPISRHDPSAHAEMVAIRAAAQALQNYRLPGSTLYVTLEP 75 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C+MCA I +R++R+ YGA+ PK G + + QF+ +H + G+ + ++ Sbjct: 76 CSMCAGLIVHSRVQRVVYGATEPKAGVVVSRGQFFDQGFLNHRVLVEGGVLAEECGAVLS 135 Query: 143 DFFKERR 149 +FF++RR Sbjct: 136 EFFRQRR 142 >gi|256827973|ref|YP_003156701.1| CMP/dCMP deaminase zinc-binding [Desulfomicrobium baculatum DSM 4028] gi|256577149|gb|ACU88285.1| CMP/dCMP deaminase zinc-binding [Desulfomicrobium baculatum DSM 4028] Length = 190 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 55/146 (37%), Positives = 74/146 (50%), Gaps = 1/146 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL+ A A R ++PVGAV V N +I+ R NR D TAHAEILA+R Sbjct: 33 EPFMCEALQLAGLAEGRGDVPVGAVVVDGNGRILGRGENRTIFENDPTAHAEILALRQAG 92 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L + L VTLEPC MC A+ AR+ + Y A +PK G + + L + Sbjct: 93 AKVGNHRLTDAVLVVTLEPCIMCLGAVIQARLAGVVYAAKDPKAGCLVSRMSGTELPWSN 152 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H G+ EQ + FF++RR Sbjct: 153 HHFWSLGGVLEQECSAKLSGFFQKRR 178 >gi|21231608|ref|NP_637525.1| hypothetical protein XCC2169 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768270|ref|YP_243032.1| hypothetical protein XC_1949 [Xanthomonas campestris pv. campestris str. 8004] gi|188991407|ref|YP_001903417.1| Putative cytidine / deoxycytidylate deaminase family protein [Xanthomonas campestris pv. campestris str. B100] gi|21113299|gb|AAM41449.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573602|gb|AAY49012.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] gi|167733167|emb|CAP51365.1| Putative cytidine / deoxycytidylate deaminase family protein [Xanthomonas campestris pv. campestris] Length = 171 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNA-ALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ AL A+ A +EIPVGAV V ++ N N D +AHAEI+A+R Sbjct: 17 DQQWMTHALRLAERAERDYDEIPVGAVLVDPTGALLGEGWNFNIASHDPSAHAEIMAMRE 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G R L+ L LYVTLEPC MCA A+ ARI R+ + AS+PK G + Sbjct: 77 GGRRLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + + ++F+ +R Sbjct: 137 HNHRVQVSGGVLAAEAGLRLTNYFRAKR 164 >gi|110636535|ref|YP_676742.1| cytosine/adenosine deaminase [Cytophaga hutchinsonii ATCC 33406] gi|110279216|gb|ABG57402.1| cytosine/adenosine deaminase [Cytophaga hutchinsonii ATCC 33406] Length = 148 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 83/149 (55%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM AL+EAQ A + EIPVGAV V NN+IISRA N+ L DVTAHAE+LAI Sbjct: 4 IHSDEHFMREALKEAQKAFEKGEIPVGAVVVSNNQIISRAYNQTELLSDVTAHAEMLAIT 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L + L+VTLEPC MCA A++ ++I + Y A + + G + Sbjct: 64 AAANHLGGKYLSDCTLFVTLEPCVMCAGALTWSQIGNVVYAAKDIRRG-----YSTISGL 118 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G + S +++ DFF++ R Sbjct: 119 KMHPKTRVCQGPFSEESEKLLLDFFRKLR 147 >gi|237800069|ref|ZP_04588530.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806398|ref|ZP_04593102.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022924|gb|EGI02981.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027511|gb|EGI07566.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. oryzae str. 1_6] Length = 168 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL A AL E+PVGAV V N +II R N D +AHAE++AIR Sbjct: 10 SNDQYFMREALALAAQGALLGEVPVGAVVVHNGEIIGRGYNCPISGSDPSAHAEMVAIRE 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ A Sbjct: 70 SAKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 130 LNHRVLFEGGVLGEECGAMLSEFFRMRR 157 >gi|320353809|ref|YP_004195148.1| tRNA-adenosine deaminase [Desulfobulbus propionicus DSM 2032] gi|320122311|gb|ADW17857.1| tRNA-adenosine deaminase [Desulfobulbus propionicus DSM 2032] Length = 146 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 54/143 (37%), Positives = 82/143 (57%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL +A+ AA E+PVGAV I++ AGN D + HAE++ +R +++ Sbjct: 4 MRRALVQARQAAEAGEVPVGAVAIDAQGAILAEAGNNCIGASDPSGHAEMVVLRRAAQVV 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP + LYVTLEPC MCAA + ARI RL +GA++PKGG I + + + +H Sbjct: 64 GNYRLPGLTLYVTLEPCPMCAALMVHARIARLVFGATDPKGGAIVSKYRIGSDGLLNHGF 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ + +++DFF+ RR Sbjct: 124 SVTGGVCAEECGNLLRDFFRGRR 146 >gi|227495664|ref|ZP_03925980.1| deaminase [Actinomyces coleocanis DSM 15436] gi|226830896|gb|EEH63279.1| deaminase [Actinomyces coleocanis DSM 15436] Length = 191 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 1/145 (0%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCR 64 VFM A+ A A ++PVGA+ V ++I+ N D HAE+ +R Sbjct: 47 VFMRQAMNLAAEAERAGDVPVGALLVSEGGEVIATGFNTREAACDPCGHAEVNVLRAAAA 106 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L P L VTLEPC MCA AI AR+ R+ +GA + G + +H Sbjct: 107 KLGTWRFPSYTLVVTLEPCVMCAGAIVSARVGRVVFGAWDRAAGACGSLRDVVRDPRVNH 166 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E++ G+ E+ + +FF+ +R Sbjct: 167 QVEVFSGVLEKECETQLLEFFQAKR 191 >gi|91783891|ref|YP_559097.1| tRNA-adenosine deaminase [Burkholderia xenovorans LB400] gi|91687845|gb|ABE31045.1| tRNA-adenosine deaminase [Burkholderia xenovorans LB400] Length = 196 Score = 190 bits (483), Expect = 8e-47, Method: Composition-based stats. Identities = 50/145 (34%), Positives = 78/145 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM+ A A+ A E+PVGAV V +++I++ N D +AHAE++A+R Sbjct: 20 LERDRRFMALAQAAAEEARAIGEVPVGAVLVRGDEVIAKGFNHPIGAHDPSAHAEMVALR 79 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + LP +LYVTLEPC MCA AI ARI R+ +GA +PK G + + Sbjct: 80 AAAQAVENYRLPGCELYVTLEPCLMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANP 139 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +H + G+ E ++ FF Sbjct: 140 QLNHHTTVTGGVLESECGAALKAFF 164 >gi|285018425|ref|YP_003376136.1| cytidine / deoxycytidylate deaminase [Xanthomonas albilineans GPE PC73] gi|283473643|emb|CBA16146.1| putative cytidine / deoxycytidylate deaminase protein [Xanthomonas albilineans] Length = 165 Score = 190 bits (483), Expect = 8e-47, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 2/149 (1%) Query: 3 KGNVFMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M AL A+ A +EIPVGAV V + ++ N N D +AHAEI+A+R Sbjct: 10 RDERWMRHALALAERAEREFDEIPVGAVLVSAEDAVLGEGWNLNIAEHDPSAHAEIVALR 69 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R L LP LYVTLEPC MCA A+ AR+ L Y A++PK G + Sbjct: 70 QAGRRLGNHRLPGSTLYVTLEPCAMCAMALVHARVAELVYAAADPKTGACGSVFDLLGDP 129 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + + ++F+ +R Sbjct: 130 RHNHRVQVRGGVLAAAASVRLTNYFRAKR 158 >gi|206560408|ref|YP_002231172.1| putative deaminase [Burkholderia cenocepacia J2315] gi|198036449|emb|CAR52345.1| putative deaminase [Burkholderia cenocepacia J2315] Length = 198 Score = 190 bits (483), Expect = 8e-47, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 76/143 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A A+ A E+PVGAV V +++I+R N D +AHAE+ A+RM Sbjct: 35 RDLHFMRLAQAAAEEARAAGEVPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMA 94 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L +P +LYVTLEPC MCA AI ARI R+ YGA++PK G + + Sbjct: 95 AQQLQNYRMPGCELYVTLEPCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQL 154 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 +H E+ G+ ++ FF Sbjct: 155 NHHTEVTGGVLADECGAALKSFF 177 >gi|330872834|gb|EGH06983.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 169 Score = 189 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL A AL E+PVGAV V N +II R N D +AHAE++AIR Sbjct: 10 SNDQHFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRD 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ Sbjct: 70 AAKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 130 LNHRVLFEGGVLGEECGAMLSEFFRMRR 157 >gi|220911573|ref|YP_002486882.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6] gi|219858451|gb|ACL38793.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6] Length = 168 Score = 189 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 58/160 (36%), Positives = 84/160 (52%), Gaps = 12/160 (7%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 K + +M AL EA+ A ++P+GAV + + +++ NR EL D TAHAE++AIR Sbjct: 6 NKHDRWMGLALAEARAALATGDVPIGAVVLGPDGEVLGAGRNRREELGDPTAHAEVVAIR 65 Query: 61 MGCRIL-----------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 L L + L VTLEPC MCA AI LARI R+ +GA + K G Sbjct: 66 QAAEQLRERARVGRGLDDGWRLSDCTLVVTLEPCAMCAGAIVLARIPRVVFGAWDEKAGA 125 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +H E+YPG+ E+ S +++DFF + R Sbjct: 126 AGSVFDILRERRLNHWVEVYPGVREEESAVLLRDFFADHR 165 >gi|120602647|ref|YP_967047.1| CMP/dCMP deaminase, zinc-binding [Desulfovibrio vulgaris DP4] gi|120562876|gb|ABM28620.1| tRNA-adenosine deaminase [Desulfovibrio vulgaris DP4] Length = 161 Score = 189 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 56/146 (38%), Positives = 76/146 (52%), Gaps = 1/146 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M AL EA+ A E+PVGAV V +II R NR D +AHAE++A+RM Sbjct: 14 ERLMDEALAEARLAQAEGEVPVGAVVVDKAGRIIGRGHNRCLRDNDPSAHAEMVALRMAA 73 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L L VTLEPC MCA AI AR+ + YGA +PK G + + + + + Sbjct: 74 TTTANYRLGGTFLVVTLEPCLMCAGAIVHARVEGVVYGAEDPKAGAVTSCLEAFEQPFLN 133 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H P G+ + I++DFF RR Sbjct: 134 HRPWHMGGVRRRACTAILKDFFNGRR 159 >gi|116625482|ref|YP_827638.1| tRNA-adenosine deaminase [Candidatus Solibacter usitatus Ellin6076] gi|116228644|gb|ABJ87353.1| tRNA-adenosine deaminase [Candidatus Solibacter usitatus Ellin6076] Length = 142 Score = 189 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 56/142 (39%), Positives = 77/142 (54%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A++ A E+PVGAV L ++I R N D TAHAEILAIR ++ Sbjct: 1 MYQALALARSGAALGEVPVGAVIALAGEVIGRGSNAPVAQMDPTAHAEILAIREAASRIA 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L LY TLEPC MCA A+ ARI R+ +GA + + GG+ + Q +H E Sbjct: 61 NYRLTGATLYCTLEPCVMCAGALVAARIERVVFGARDLRFGGVRSKFQLADSDLLNHRVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I G+ Q++++FF+ RR Sbjct: 121 IVEGVLAVECVQLLREFFENRR 142 >gi|310288270|ref|YP_003939529.1| tRNA-specific adenosine deaminase [Bifidobacterium bifidum S17] gi|309252207|gb|ADO53955.1| tRNA-specific adenosine deaminase [Bifidobacterium bifidum S17] Length = 150 Score = 189 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+ + A + ++PVGAV + +I R NR D AHAEI A+R + Sbjct: 8 MCEAIALGERAGKQGDVPVGAVVLDERGTVIGRGRNRREAGHDPLAHAEIEAMREAAQAR 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPC MCA A RI R+ +GA + K G + H P Sbjct: 68 GDWNLADCTLVVTLEPCPMCAGACIQTRIGRIVFGAWDAKLGACGSIWDIPRDPHVGHVP 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E +++ FF RR Sbjct: 128 QVVGGVREAACARLLTGFFASRR 150 >gi|49081784|gb|AAT50292.1| PA3767 [synthetic construct] Length = 183 Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 61/148 (41%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL EA+ AA E+PVGAV V +II R NR D +AHAE+LAIRM Sbjct: 26 SRDPHFMREALAEAEKAAALGEVPVGAVLVREGEIIGRGFNRPISSHDPSAHAEMLAIRM 85 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 LP LYVTLEPC+MC+ + ARI+RL YG PK G +E+ +F+ Sbjct: 86 AAAEAGNYRLPGSTLYVTLEPCSMCSGLLVHARIQRLVYGTVEPKSGAVESRGRFFEQEH 145 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + Q + FF+ RR Sbjct: 146 LNHRVMVEGGVLAEECSQALSAFFRARR 173 >gi|15598962|ref|NP_252456.1| hypothetical protein PA3767 [Pseudomonas aeruginosa PAO1] gi|116051766|ref|YP_789395.1| hypothetical protein PA14_15680 [Pseudomonas aeruginosa UCBPP-PA14] gi|218889954|ref|YP_002438818.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa LESB58] gi|254236673|ref|ZP_04929996.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|254242457|ref|ZP_04935779.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|296387724|ref|ZP_06877199.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa PAb1] gi|313109181|ref|ZP_07795150.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa 39016] gi|9949937|gb|AAG07154.1|AE004795_6 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|115586987|gb|ABJ13002.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa UCBPP-PA14] gi|126168604|gb|EAZ54115.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126195835|gb|EAZ59898.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|218770177|emb|CAW25939.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa LESB58] gi|310881652|gb|EFQ40246.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa 39016] Length = 182 Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 61/148 (41%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL EA+ AA E+PVGAV V +II R NR D +AHAE+LAIRM Sbjct: 26 SRDPHFMREALAEAEKAAALGEVPVGAVLVREGEIIGRGFNRPISSHDPSAHAEMLAIRM 85 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 LP LYVTLEPC+MC+ + ARI+RL YG PK G +E+ +F+ Sbjct: 86 AAAEAGNYRLPGSTLYVTLEPCSMCSGLLVHARIQRLVYGTVEPKSGAVESRGRFFEQEH 145 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + Q + FF+ RR Sbjct: 146 LNHRVMVEGGVLAEECSQALSAFFRARR 173 >gi|160931212|ref|ZP_02078614.1| hypothetical protein CLOLEP_00049 [Clostridium leptum DSM 753] gi|156869767|gb|EDO63139.1| hypothetical protein CLOLEP_00049 [Clostridium leptum DSM 753] Length = 163 Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 80/147 (54%), Gaps = 1/147 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL+ A AA E+PVGAV V + +IS NR K+ HAE+ AI Sbjct: 10 EDKAWMREALKLADLAAAEGEVPVGAVIVKDGVLISAGRNRRELGKNALYHAELEAIDGA 69 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C+ L L + DLYVTLEPC MC AI ARIRRL YGA +PK G + + L Sbjct: 70 CKALGGWRLWQCDLYVTLEPCPMCTGAIINARIRRLCYGAKDPKAGSCGSVVNLFELPY- 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P++ G+ E+ + + FF+ R Sbjct: 129 NHKPQVISGVLEEACAERLSGFFRSLR 155 >gi|113952793|ref|YP_730770.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. CC9311] gi|113880144|gb|ABI45102.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. CC9311] Length = 203 Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 46/149 (30%), Positives = 80/149 (53%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 +K +M +E A+ R E+PV AV + + + I N+ D HAE++A+R Sbjct: 37 QKMQAWMGILIERARRFGERGEVPVSAVVLDHHGRCIGHGINQRELHHDPLGHAELMAVR 96 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR+ L + L VTLEPC MCA A+ AR+ ++ + A++PK G + + T Sbjct: 97 QACRLRGDWRLNDCTLLVTLEPCPMCAGALVQARVGQVIFAATDPKRGAMGSTINLATHI 156 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + HH + G+ + +++++ +FK+RR Sbjct: 157 SAHHRMTVIGGVLGEEAKEMLSSWFKQRR 185 >gi|150019816|ref|YP_001312070.1| CMP/dCMP deaminase, zinc-binding [Clostridium beijerinckii NCIMB 8052] gi|149906281|gb|ABR37114.1| CMP/dCMP deaminase, zinc-binding [Clostridium beijerinckii NCIMB 8052] Length = 149 Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 56/143 (39%), Positives = 77/143 (53%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A EEA+ A + EIPVGAV VL++KII RA N L D TAHAEILAI+ + + Sbjct: 4 FLKIAKEEAKMAMKKGEIPVGAVIVLDDKIIGRAHNLKETLNDSTAHAEILAIKEASKFI 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L ++YVTLEPC MCA AI +RI ++Y G N G + + Sbjct: 64 GDWRLNRAEMYVTLEPCPMCAGAIIQSRISKVYIGTFNKDMGACGSVIDVTDNKWLNSFV 123 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + ++ I+ +FF +RR Sbjct: 124 S-TKWLYDKECSDIMLEFFCQRR 145 >gi|330959126|gb|EGH59386.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas syringae pv. maculicola str. ES4326] Length = 169 Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM AL A AL E+PVGAV V + +II R N D +AHAE++AIR Sbjct: 10 SKDQHFMREALALAAQGALLGEVPVGAVLVQHGEIIGRGYNCPISGSDPSAHAEMMAIRD 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LP LYVTLEPC+MCA I +R+ R+ YGA PK G +E+ QF++ Sbjct: 70 AAKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVESQGQFFSQGF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 130 LNHRVLFEGGVLGEECGAMLSEFFRMRR 157 >gi|83859467|ref|ZP_00952988.1| cytidine and deoxycytidylate deaminase family protein [Oceanicaulis alexandrii HTCC2633] gi|83852914|gb|EAP90767.1| cytidine and deoxycytidylate deaminase family protein [Oceanicaulis alexandrii HTCC2633] Length = 164 Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 68/145 (46%), Positives = 90/145 (62%), Gaps = 2/145 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL AQ AA E PVGAV V + II+ AGN D T HAEI A+R+ + Sbjct: 16 FMRRALGLAQAAAAAGETPVGAVIVDPQTDNIIAEAGNAPISDCDPTGHAEIRALRLAAQ 75 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L ++LYVTLEPC MCA AIS ARI ++ YGAS+PKGG +++G QF+ TCH Sbjct: 76 KLGNYRLTGLELYVTLEPCAMCAGAISHARIGKVIYGASDPKGGAVDHGPQFFAQPTCHW 135 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 PE+ G+ + ++++ FF+ RR Sbjct: 136 RPEVQGGVLADEASEMLKAFFRARR 160 >gi|304413544|ref|ZP_07395017.1| CMP/dCMP deaminase [Candidatus Regiella insecticola LSR1] gi|304284387|gb|EFL92780.1| CMP/dCMP deaminase [Candidatus Regiella insecticola LSR1] Length = 181 Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 57/143 (39%), Positives = 76/143 (53%), Gaps = 1/143 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ AL+ A A E+PVGAV VL NKII N+ D +AHAEI+A+R Sbjct: 27 NDEHWMAAALKLAARAQAAGEVPVGAVLVLQNKIIGEGWNQPIIHHDPSAHAEIMALRQA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + LP+ LYVTLEPC MCA A+ +RI RL YGA++ K G + T Sbjct: 87 GQQQKNYRLPDATLYVTLEPCVMCAGAMIHSRISRLVYGANDNKIGAVGALT-LLNHPAM 145 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 +H EI G+ Q++ FF Sbjct: 146 NHQVEITAGVLVDACSQMLSTFF 168 >gi|288958823|ref|YP_003449164.1| CMP/dCMP deaminase [Azospirillum sp. B510] gi|288911131|dbj|BAI72620.1| CMP/dCMP deaminase [Azospirillum sp. B510] Length = 150 Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 75/131 (57%), Positives = 97/131 (74%), Gaps = 2/131 (1%) Query: 21 RNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78 R E+PVGAV V +++ AGNR EL D +AHAE+LAIR C Q LP DLYV Sbjct: 20 RGEVPVGAVIVDAATGTVLASAGNRTEELCDPSAHAELLAIRAACAERRQPRLPGCDLYV 79 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 TLEPC +CAAAIS ARIRR+YYGA +PKGG +++G +F+T ATCHH+PE+Y GI E R+ Sbjct: 80 TLEPCALCAAAISFARIRRVYYGAYDPKGGAVDHGPRFFTQATCHHAPEVYSGIGETRAS 139 Query: 139 QIIQDFFKERR 149 +++DFF++RR Sbjct: 140 LLLRDFFRKRR 150 >gi|42521861|ref|NP_967241.1| cytosine deaminase [Bdellovibrio bacteriovorus HD100] gi|39574391|emb|CAE77895.1| Cytosine deaminase [Bdellovibrio bacteriovorus HD100] Length = 313 Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 56/146 (38%), Positives = 76/146 (52%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL A+ AA R E+PV A+ V +IS A N + HAE+LA+ Sbjct: 7 DEKWMRKALALARKAAEREEVPVAAIVVGPEGMISYAINTRERQQSPLGHAELLALHKAS 66 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L + LYVTLEPC MCA AI +RI R+ YGA + K G +E+ + Sbjct: 67 QKRGSWRLSDCTLYVTLEPCVMCAGAIQQSRIARVVYGAKDVKAGAVESLYHILKDPRLN 126 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI E +++QDFFK RR Sbjct: 127 HQVEVSSGILEDDCSELLQDFFKGRR 152 >gi|152112358|sp|Q92G39|Y1285_RICCN RecName: Full=Uncharacterized deaminase RC1285 Length = 153 Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 64/144 (44%), Positives = 95/144 (65%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL++A+ A +NE+PVGAV V + KII+ N E + HAEI+AI C + Sbjct: 1 MEQALKQAKIAFDKNEVPVGAVVVDRLHQKIIASTHNNTEEKNNALYHAEIIAINEACNL 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 +S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+ +++ + C H Sbjct: 61 ISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGVVESNLRYFNSSACFHR 120 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PEIY GI + S ++++FFK R Sbjct: 121 PEIYSGILAEDSGLLMKEFFKRIR 144 >gi|330985033|gb|EGH83136.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 169 Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM AL A AL E+PVGAV V N +II R N D +AHAE++AIR Sbjct: 10 SKDQDFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISASDPSAHAEMVAIRD 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ Sbjct: 70 AASALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 130 LNHRVLFEGGVLSEECGAMLSEFFRMRR 157 >gi|221198274|ref|ZP_03571320.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD2M] gi|221208213|ref|ZP_03581217.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD2] gi|221171861|gb|EEE04304.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD2] gi|221182206|gb|EEE14607.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD2M] Length = 187 Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 53/146 (36%), Positives = 78/146 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL A+ A E+PVGAV V +++++R N D +AHAE+ A+RM Sbjct: 23 SRDVHFMRLALAAAEEARAAGEVPVGAVLVRGDEVLARGFNHPIGGHDPSAHAEMAALRM 82 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L +P +LYVTLEPC MCA AI ARI R+ +GA++PK G + + Sbjct: 83 AAQHLQNYRMPGCELYVTLEPCLMCAGAIMHARIARVVFGAADPKTGVCGSVMDAFANPQ 142 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147 +H E+ G+ ++ FF E Sbjct: 143 LNHHTEVVGGVLANECGAALKSFFAE 168 >gi|167626885|ref|YP_001677385.1| zinc-binding protein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596886|gb|ABZ86884.1| zinc-binding protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 142 Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 50/142 (35%), Positives = 79/142 (55%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A E+A A E+P+GAV V +N+I+++ N+ L D TAHAEIL +R + L Sbjct: 1 MQKAYEQALLAYKAGEVPIGAVLVKDNQIVAQDFNKTIMLNDPTAHAEILVLRQAAKELE 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L LYVTLEPC MC + AR+ L Y + + G I + + + + +H+ + Sbjct: 61 NYRLVNTKLYVTLEPCIMCLGGLIQARVSELVYACDDTRVG-IFSREKLHQSKSINHNLK 119 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ + ++++DFFK RR Sbjct: 120 VTSGVMIEECSKLLRDFFKLRR 141 >gi|144897625|emb|CAM74489.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Magnetospirillum gryphiswaldense MSR-1] Length = 146 Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 72/129 (55%), Positives = 91/129 (70%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 R E+PVGAV V ++I+ GNR EL D TAHAE+ IR L Q L E DLYVTL Sbjct: 18 RGEVPVGAVLVRAGQVIAADGNRVEELHDPTAHAEMQVIRAAATRLGQTRLEECDLYVTL 77 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCAAAI+ AR+RRLYYGA +PKGGG+E+G + + +TCHH PEI G+ E + + Sbjct: 78 EPCPMCAAAIAHARLRRLYYGAYDPKGGGVEHGARVFERSTCHHRPEIVGGLREAENAAL 137 Query: 141 IQDFFKERR 149 +QDFF++RR Sbjct: 138 LQDFFRQRR 146 >gi|113477509|ref|YP_723570.1| tRNA-adenosine deaminase [Trichodesmium erythraeum IMS101] gi|110168557|gb|ABG53097.1| tRNA-adenosine deaminase [Trichodesmium erythraeum IMS101] Length = 156 Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 75/147 (51%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +MS LE A+ A E+PV A V + K+++ A NR D T HAEILA+R Sbjct: 10 HKKWMSRVLELAKTAGDAGEVPVAAAVVNSDGKLVTEAQNRRERDFDPTGHAEILALRQA 69 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++L L + LYV LEPC MC AI ARI L YGA +PK G + F Sbjct: 70 GQVLQNWHLNQCTLYVNLEPCPMCTGAILQARIGLLVYGADDPKTGTVRTVANFPDSVFS 129 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + GI E RQ +Q +F + R Sbjct: 130 NHRLSVLGGIMEGACRQQLQSWFAKFR 156 >gi|126668408|ref|ZP_01739365.1| hypothetical protein MELB17_14743 [Marinobacter sp. ELB17] gi|126627117|gb|EAZ97757.1| hypothetical protein MELB17_14743 [Marinobacter sp. ELB17] Length = 167 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 78/147 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ AL A AA E+PVGAV V++ + + N+ D TAHAEI A+R Sbjct: 11 NDEYWMNRALALAAQAAALGEVPVGAVVVIDGQEVGAGFNKPISSCDPTAHAEICALRQA 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L+ L LYVTLEPCTMC AI +RI R+ YGA+ PK G +E+ + + Sbjct: 71 ATYLNNYRLSGATLYVTLEPCTMCVGAIVHSRISRVVYGATEPKAGAVESARRTFDEPHL 130 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 + E G+ + +II DFF RR Sbjct: 131 NWRVETRGGLLAEPCSRIISDFFSRRR 157 >gi|119179553|ref|XP_001241350.1| hypothetical protein CIMG_08513 [Coccidioides immitis RS] Length = 230 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 47/144 (32%), Positives = 69/144 (47%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL+ A+ A E PVG V V + K+I R N + T HAE LAI Sbjct: 51 HEQFMREALQMAEQALAIGETPVGCVLVHDGKVIGRGMNDTNRSLNGTRHAEFLAIEEAL 110 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R + I DLYVT+EPC MCA+ + IRR+++G N + GG ++ Sbjct: 111 RSYPRSIFRTTDLYVTVEPCIMCASLLRQNYIRRVFFGCVNDRFGGTGGVLNLHSDRAID 170 Query: 124 HSPEIYPGISEQRSRQIIQDFFKE 147 +Y GI + +++ F+ + Sbjct: 171 PPYTVYGGIFRNEAIMLLRRFYIQ 194 >gi|238897621|ref|YP_002923300.1| CMP/dCMP deaminase; zinc-binding [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465378|gb|ACQ67152.1| CMP/dCMP deaminase; zinc-binding [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 168 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 80/147 (54%), Gaps = 2/147 (1%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL A+ A E+P+GAV V+NN+ I N++ D TAHAEI+A+R Sbjct: 14 DHHYWMRHALSLAEQAQASGEVPIGAVVVVNNQSIGEGWNQSVMCHDPTAHAEIIALRQA 73 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L LYVTLEPC MC AI +RIR L YGA +PK GG+ T+ + Sbjct: 74 GRHQKNYRLVNATLYVTLEPCMMCVGAIMHSRIRGLVYGAPDPKKGGVAFLTRMMNIQV- 132 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +I + Q +++ DFF++RR Sbjct: 133 -KRIDIKTDVLSQTCSRMLVDFFQQRR 158 >gi|254510248|ref|ZP_05122315.1| cytosine deaminase [Rhodobacteraceae bacterium KLH11] gi|221533959|gb|EEE36947.1| cytosine deaminase [Rhodobacteraceae bacterium KLH11] Length = 144 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 74/143 (51%), Positives = 101/143 (70%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE+A+ AA R E+PVGAV V + ++++ GNR REL D TAHAEILA+R C + Sbjct: 1 MKLALEQARAAADRGEVPVGAVIVAPDGQVVAADGNRTRELNDPTAHAEILALRAACAQV 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E LP+ DLYVTLEPC MCAAA++ ARIRR+YYGAS+PK GG+ +G + ++ HH P Sbjct: 61 KSERLPDHDLYVTLEPCAMCAAALAAARIRRVYYGASDPKSGGVAHGARVFSHPQTHHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GI+ + +++ FF +R Sbjct: 121 EVYDGIAADEAAALLKQFFAAQR 143 >gi|70732252|ref|YP_262008.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas fluorescens Pf-5] gi|68346551|gb|AAY94157.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas fluorescens Pf-5] Length = 162 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL A A E+PVGAV VL+ ++I R N D +AHAE++AIR Sbjct: 13 SRDQDFMREALALAAQGAALGEVPVGAVLVLDGQVIGRGYNCPISGSDPSAHAEMVAIRE 72 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + +S LP LYVTLEPC+MCA I +RI R+ YGA PK G +++ QF+T Sbjct: 73 AAQAVSNYRLPGSTLYVTLEPCSMCAGLIVHSRIARVVYGALEPKAGIVQSQGQFFTQGF 132 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FFK RR Sbjct: 133 LNHRVLYEGGVLAEECGTVLSEFFKARR 160 >gi|296446445|ref|ZP_06888389.1| CMP/dCMP deaminase zinc-binding [Methylosinus trichosporium OB3b] gi|296256080|gb|EFH03163.1| CMP/dCMP deaminase zinc-binding [Methylosinus trichosporium OB3b] Length = 183 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 72/127 (56%), Positives = 94/127 (74%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGA V N II+ AGNR +D TAHAE+LAIR C L E L + DLYVTLEP Sbjct: 57 EVPVGATIVRNGAIIAVAGNRTLRDRDPTAHAEMLAIRAACATLRTERLTDCDLYVTLEP 116 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCAAAIS ARIRRLY+GA +PKGGG+E+G + ++ TCHH+PE+Y G+ E+ + ++++ Sbjct: 117 CAMCAAAISFARIRRLYFGAEDPKGGGVEHGARVFSQKTCHHAPEVYGGLREREAAELLR 176 Query: 143 DFFKERR 149 FF+ RR Sbjct: 177 AFFQARR 183 >gi|28868664|ref|NP_791283.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213972056|ref|ZP_03400150.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. tomato T1] gi|301385879|ref|ZP_07234297.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. tomato Max13] gi|302063770|ref|ZP_07255311.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. tomato K40] gi|302132520|ref|ZP_07258510.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851903|gb|AAO54978.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213923189|gb|EEB56790.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. tomato T1] Length = 169 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL A AL E+PVGAV V N +II R N D +AHAE++AIR Sbjct: 10 SNDQHFMREALALAAQGALLGEVPVGAVVVHNGEIIGRGYNCPISGSDPSAHAEMVAIRD 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ Sbjct: 70 AARALGNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 130 LNHRVLFEGGVLGEECGAMLSEFFRLRR 157 >gi|289450534|ref|YP_003475019.1| cytidine and deoxycytidylate deaminase zinc-binding region [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185081|gb|ADC91506.1| cytidine and deoxycytidylate deaminase zinc-binding region [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 149 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 55/142 (38%), Positives = 75/142 (52%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL +A + + E P+GAV V +I++ N + +T HAEI AI R L Sbjct: 1 MRRALHQAALSERKGEAPIGAVIVYQGRIVAHGRNSRQNSNLITGHAEISAILQAERKLK 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 LPE D+YVTLEPC MCA AI ARIR +Y+GAS+PKGG + + + L +H Sbjct: 61 SWRLPECDIYVTLEPCIMCAGAIQQARIRHVYFGASDPKGGAVVSCGNIFDLPGLNHHVG 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 I + +FF+ R Sbjct: 121 YTGAILADECSTALSNFFRNLR 142 >gi|23016531|ref|ZP_00056286.1| COG0590: Cytosine/adenosine deaminases [Magnetospirillum magnetotacticum MS-1] Length = 145 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 76/126 (60%), Positives = 98/126 (77%), Gaps = 1/126 (0%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V + +II+RAGNR EL D TAHAE+LAIR +L + L + DLYVTLEPC Sbjct: 21 VPVGAVVVQDGRIIARAGNRVEELGDPTAHAEMLAIR-AATVLGDKRLEDCDLYVTLEPC 79 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCAAAISLARIRRLY+GA +PK GG+E+G++ + ATCHH PE+Y G+ E+RS ++++ Sbjct: 80 PMCAAAISLARIRRLYFGAYDPKSGGVEHGSKVFDHATCHHRPEVYGGLEERRSAELLRV 139 Query: 144 FFKERR 149 FF ERR Sbjct: 140 FFAERR 145 >gi|218129188|ref|ZP_03457992.1| hypothetical protein BACEGG_00763 [Bacteroides eggerthii DSM 20697] gi|217988566|gb|EEC54886.1| hypothetical protein BACEGG_00763 [Bacteroides eggerthii DSM 20697] Length = 138 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 58/142 (40%), Positives = 77/142 (54%), Gaps = 5/142 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ A R E+PVGAV V +++I+RA N L DVTAHAE+ AI L Sbjct: 1 MKQALLEAQKAGDRGEVPVGAVVVCKDRVIARAHNLTETLTDVTAHAEMQAITAAASTLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L E LYVT+EPC MCA AI+ A+ RL +GA + K G Q Y H Sbjct: 61 GKYLNECTLYVTVEPCVMCAGAIAWAQTGRLVFGAEDEKRG-----YQRYAPHALHPKTV 115 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ ++++FF +R Sbjct: 116 VVKGVLGDECAALMKNFFAGKR 137 >gi|325680619|ref|ZP_08160161.1| cytidine and deoxycytidylate deaminase zinc-binding region [Ruminococcus albus 8] gi|324107689|gb|EGC01963.1| cytidine and deoxycytidylate deaminase zinc-binding region [Ruminococcus albus 8] Length = 156 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 54/151 (35%), Positives = 79/151 (52%), Gaps = 3/151 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILA 58 M + ++M ALE A AA +E+PVGAV V +I+ R NR + HAEI+A Sbjct: 1 MTRDEMYMRKALELAALAAEEDEVPVGAVVVKKSTGEIVGRGFNRREYGRSPLTHAEIVA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I R L L + +L+VTLEPC MCA A+ +R+ R+ +GA + K G + + Sbjct: 61 IEQASRKLGGWRLIDCELFVTLEPCPMCAGAVINSRVERVVFGAYDKKAGSCGSVVDLFG 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 L +H PE G+ E+ + FF+ R Sbjct: 121 LPY-NHKPECVGGVLEEECAAALSVFFRGLR 150 >gi|326385790|ref|ZP_08207419.1| tRNA-adenosine deaminase [Novosphingobium nitrogenifigens DSM 19370] gi|326209769|gb|EGD60557.1| tRNA-adenosine deaminase [Novosphingobium nitrogenifigens DSM 19370] Length = 142 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 67/142 (47%), Positives = 94/142 (66%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ EA+NAA +P+GAV + ++I+ A N R+ D TAHAEILAIR + L Sbjct: 1 MRLAMVEARNAAQVGAVPIGAVVMRGGEVIATAHNGPRDCHDPTAHAEILAIRAAAKALG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L + DL+VTLEPC MCA AI+ ARI R+YY A +PKGG +E+G + + +T H PE Sbjct: 61 ADRLDDCDLWVTLEPCAMCAGAIAHARIARVYYAAPDPKGGAVEHGPRLFEQSTVLHRPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IY G+ E S +++++FF RR Sbjct: 121 IYSGLGELESARLLREFFAARR 142 >gi|110632788|ref|YP_672996.1| CMP/dCMP deaminase, zinc-binding [Mesorhizobium sp. BNC1] gi|110283772|gb|ABG61831.1| CMP/dCMP deaminase, zinc-binding protein [Chelativorans sp. BNC1] Length = 171 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 72/127 (56%), Positives = 95/127 (74%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+PVGAV V + ++++ AGNR REL D TAHAE+LAIR C E L DLYVTLEP Sbjct: 44 EVPVGAVVVRDGRLLASAGNRTRELNDPTAHAEMLAIRAACEAEGAERLIGADLYVTLEP 103 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCA AIS ARIRRLY+GAS+PKGGG+ +G +F+T TCHH+PE+Y G+ E+ + +++ Sbjct: 104 CAMCAGAISFARIRRLYFGASDPKGGGVIHGGRFFTQPTCHHAPEVYEGLGEREAATLLK 163 Query: 143 DFFKERR 149 +FF +R Sbjct: 164 NFFAGKR 170 >gi|289177738|gb|ADC84984.1| tRNA-specific adenosine deaminase [Bifidobacterium animalis subsp. lactis BB-12] Length = 204 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 50/150 (33%), Positives = 73/150 (48%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 M + M AL +A+ A ++PVGAV + + ++I R N D AHAEI+A+ Sbjct: 53 MTQYAEAMGEALAQARMARSAGDVPVGAVVLDAHGEVIGRGRNLRERDADPLAHAEIVAM 112 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + L + L VTLEPC MCA A RI R+ +G + K G + Sbjct: 113 REAAAVRGNWNLADCTLVVTLEPCPMCAGACLQTRIGRIVFGGWDAKLGACGSVWDIPRD 172 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H PE+Y G+ E+ ++ +FF RR Sbjct: 173 PHVGHEPEVYGGVCERECTALLAEFFHSRR 202 >gi|258509262|ref|YP_003172013.1| CMP/dCMP deaminase [Lactobacillus rhamnosus GG] gi|257149189|emb|CAR88162.1| CMP/dCMP deaminase, zinc-binding [Lactobacillus rhamnosus GG] Length = 168 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 52/128 (40%), Positives = 69/128 (53%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+P+GAV V + +II R N +D T HAEILAI+ CR L L + L+VTLE Sbjct: 24 GEVPIGAVVVHDQQIIGRGYNLRETTQDATQHAEILAIQAACRQLGTWRLEDCSLFVTLE 83 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA + ARI Y+GA++PK G +H + PGI S ++ Sbjct: 84 PCPMCAGTMINARIATCYFGATDPKAGVAGTFYNLLEDTRFNHQVAVVPGIQAIASAALL 143 Query: 142 QDFFKERR 149 QDFF+ R Sbjct: 144 QDFFRAIR 151 >gi|163784431|ref|ZP_02179312.1| Cytosine/adenosine deaminase [Hydrogenivirga sp. 128-5-R1-1] gi|159880298|gb|EDP73921.1| Cytosine/adenosine deaminase [Hydrogenivirga sp. 128-5-R1-1] Length = 146 Score = 188 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 86/149 (57%), Gaps = 3/149 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+K V +EEA+ A ++E+PVGA+ V N +IIS+ N+ + HAEI+AI Sbjct: 1 MQKNIV--KKLIEEAKKAYKKDEVPVGALIVRNGEIISKGHNQRITKNNALYHAEIVAIE 58 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L + +++V+LEPC MCA AI +RI+++Y+ A + KGG + + + + Sbjct: 59 KACKKLKSWRLDDCEIWVSLEPCVMCAGAIMQSRIKKVYFLAQDEKGGAVISKYRLFDDN 118 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + Y I + + I++ FFKE+R Sbjct: 119 KLPFKVD-YEYIPVKEASDILKRFFKEKR 146 >gi|115352007|ref|YP_773846.1| CMP/dCMP deaminase [Burkholderia ambifaria AMMD] gi|115281995|gb|ABI87512.1| tRNA-adenosine deaminase [Burkholderia ambifaria AMMD] Length = 193 Score = 188 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 76/143 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A A+ A E+PVGAV V +++I+R N D +AHAE+ A+RM Sbjct: 30 RDLHFMRLAQAAAEEARAAGEVPVGAVLVCGDEVIARGFNHPIGGHDPSAHAEMAALRMA 89 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L +P +LYVTLEPC MCA AI ARI R+ YGA++PK G + + Sbjct: 90 AQHLQNYRMPGCELYVTLEPCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQL 149 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 +H E+ G+ ++ FF Sbjct: 150 NHHTEVTGGVLADECGAALKSFF 172 >gi|172060929|ref|YP_001808581.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria MC40-6] gi|171993446|gb|ACB64365.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria MC40-6] Length = 159 Score = 188 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 48/124 (38%), Positives = 69/124 (55%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I+R N D +AHAE+ A+RM + L +P +LYVTLE Sbjct: 15 GEVPVGAVLVCGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLE 74 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI ARI R+ YGA++PK G + + +H E+ G+ + Sbjct: 75 PCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAAL 134 Query: 142 QDFF 145 + FF Sbjct: 135 KSFF 138 >gi|171320346|ref|ZP_02909387.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria MEX-5] gi|171094424|gb|EDT39487.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria MEX-5] Length = 159 Score = 188 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 48/124 (38%), Positives = 69/124 (55%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I+R N D +AHAE+ A+RM + L +P +LYVTLE Sbjct: 15 GEVPVGAVLVCGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLE 74 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI ARI R+ YGA++PK G + + +H E+ G+ + Sbjct: 75 PCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAAL 134 Query: 142 QDFF 145 + FF Sbjct: 135 KSFF 138 >gi|325519416|gb|EGC98819.1| tRNA-adenosine deaminase [Burkholderia sp. TJI49] Length = 193 Score = 188 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 76/143 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A A+ A E+PVGAV V +++I+R N D +AHAE+ A+RM Sbjct: 29 RDVHFMRLAQAAAEEARAAGEVPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMA 88 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L +P +LYVTLEPC MCA AI ARI R+ YGA++PK G + + Sbjct: 89 AQHLQNYRMPGCELYVTLEPCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQL 148 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 +H E+ G+ ++ FF Sbjct: 149 NHHTEVTGGVLADECGAALKSFF 171 >gi|331019747|gb|EGH99803.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 169 Score = 188 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL A AL E+PVGAV V N +II R N D +AHAE++AIR Sbjct: 10 SNDQHFMREALALAAQGALLGEVPVGAVVVHNGEIIGRGYNCPISGSDPSAHAEMVAIRD 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ Sbjct: 70 AARALGNYRLPGSTLYVTLEPCSMCAGLIVHSRLARVVYGALEPKAGIVQSQGQFFSQGF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 130 LNHRVLFEGGVLGEECGAMLSEFFRLRR 157 >gi|254429334|ref|ZP_05043041.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Alcanivorax sp. DG881] gi|196195503|gb|EDX90462.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Alcanivorax sp. DG881] Length = 150 Score = 188 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 83/147 (56%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ AA E+PVGA+ V +N+++ + N+ D +AHAEI+A+R Sbjct: 2 DDQYWMQQALALARQAADNGEVPVGALVVRDNRLLGKGYNQPIIASDPSAHAEIVAMRSA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L LYVTLEPCTMC A+ ARI RL YGAS P+ G E+ Q ++ Sbjct: 62 AQAERNYRLSGSTLYVTLEPCTMCFGAMVHARIGRLVYGASEPRAGVCESQLQLPSVDFY 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + S +++ FF ERR Sbjct: 122 NHRMDVEGGVLAEESALLLKGFFAERR 148 >gi|28198227|ref|NP_778541.1| cytosine deaminase [Xylella fastidiosa Temecula1] gi|170729545|ref|YP_001774978.1| cytosine deaminase [Xylella fastidiosa M12] gi|182680863|ref|YP_001829023.1| CMP/dCMP deaminase zinc-binding [Xylella fastidiosa M23] gi|28056297|gb|AAO28190.1| cytosine deaminase [Xylella fastidiosa Temecula1] gi|167964338|gb|ACA11348.1| cytosine deaminase [Xylella fastidiosa M12] gi|182630973|gb|ACB91749.1| CMP/dCMP deaminase zinc-binding [Xylella fastidiosa M23] Length = 165 Score = 188 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 2/149 (1%) Query: 3 KGNVFMSCALEEAQNAALR-NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 + +M AL A AA +EIPVGAV + ++ N N D +AHAEI+A+R Sbjct: 10 EHTHWMRHALTLAHRAATEFDEIPVGAVLISPEGTLLGEGCNYNITSHDPSAHAEIMALR 69 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L +P LYVTLEPC MCA AI ARI L Y A++PK G + Sbjct: 70 AAGHQLRNHRMPGCTLYVTLEPCLMCAMAIIHARIAHLIYAAADPKTGACGSTFDILNDP 129 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +Y G+ + + + + ++F+ +R Sbjct: 130 RHNHHVHVYGGLLAEEASRRLTNYFRTKR 158 >gi|182678875|ref|YP_001833021.1| CMP/dCMP deaminase zinc-binding [Beijerinckia indica subsp. indica ATCC 9039] gi|182634758|gb|ACB95532.1| CMP/dCMP deaminase zinc-binding [Beijerinckia indica subsp. indica ATCC 9039] Length = 151 Score = 188 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 77/140 (55%), Positives = 97/140 (69%) Query: 10 CALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A EEA AA R E+PVGAV + I++RAGN+ KD TAHAE+LAIR C +L E Sbjct: 12 LAFEEAHKAAARGEVPVGAVIMREGIILARAGNQVLADKDPTAHAEMLAIRQACAVLGSE 71 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 L DLYVTLEPC MCAAAI+ AR+RRLY+ AS+PKGGG+E+G + + TCHH EIY Sbjct: 72 RLIGCDLYVTLEPCAMCAAAIAHARLRRLYFSASDPKGGGVEHGARIFAQPTCHHVTEIY 131 Query: 130 PGISEQRSRQIIQDFFKERR 149 G+ E + +++ FF ERR Sbjct: 132 GGLRESEAAALLRAFFLERR 151 >gi|269217562|ref|ZP_06161416.1| tRNA-specific adenosine deaminase [Actinomyces sp. oral taxon 848 str. F0332] gi|269212497|gb|EEZ78837.1| tRNA-specific adenosine deaminase [Actinomyces sp. oral taxon 848 str. F0332] Length = 166 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 49/139 (35%), Positives = 73/139 (52%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 ++ A+E A AAL ++PVGA+ V + ++ N D HAEI A+R + + Sbjct: 26 WIGRAMELADRAALAGDVPVGALVVRGSAVLGVGWNTREARNDPAGHAEIAALREAAQAV 85 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L DLYVTLEPCTMCA AI +R+ R+ +GA +PK G + A +H Sbjct: 86 GDWRLEGCDLYVTLEPCTMCAGAIVASRVARVVFGAWDPKAGAAGSVRDVLRDARLNHRV 145 Query: 127 EIYPGISEQRSRQIIQDFF 145 E+ G+ E + ++ FF Sbjct: 146 EVVGGVREDECSRQLRAFF 164 >gi|311065133|ref|YP_003971859.1| cytosine/adenosine deaminase [Bifidobacterium bifidum PRL2010] gi|310867453|gb|ADP36822.1| Cytosine/adenosine deaminase [Bifidobacterium bifidum PRL2010] Length = 150 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+ + A + ++PVGAV + +I R NR E D AHAEI A+R + Sbjct: 8 MCEAIALGERAGKQGDVPVGAVVLDERGTVIGRGRNRREEGHDPLAHAEIEAMREAAQAR 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPC MCA A I R+ +GA + K G + H P Sbjct: 68 GDWNLADCTLVVTLEPCPMCAGACIQTHIGRIVFGAWDAKLGACGSIWDIPRDPHVGHVP 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E +++ FF RR Sbjct: 128 QVVGGVREAACARLLTGFFASRR 150 >gi|46579939|ref|YP_010747.1| cytidine/deoxycytidylate deaminase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|46449355|gb|AAS96006.1| cytidine/deoxycytidylate deaminase family protein [Desulfovibrio vulgaris str. Hildenborough] Length = 161 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 56/146 (38%), Positives = 76/146 (52%), Gaps = 1/146 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M AL EA+ A E+PVGAV V +II R NR D +AHAE++A+RM Sbjct: 14 ERLMDEALAEARLAQAEGEVPVGAVVVDKAGRIIGRGHNRCLRDNDPSAHAEMVALRMAA 73 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L L VTLEPC MCA AI AR+ + YGA +PK G + + + + + Sbjct: 74 TTTANYRLGGTFLVVTLEPCLMCAGAIVHARVEGVVYGAEDPKAGAVTSCLEAFEQPFLN 133 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H P G+ + I++DFF RR Sbjct: 134 HRPWHMGGLRRRACTAILKDFFNGRR 159 >gi|297243273|ref|ZP_06927208.1| cytidine and deoxycytidylate deaminase [Gardnerella vaginalis AMD] gi|296888807|gb|EFH27544.1| cytidine and deoxycytidylate deaminase [Gardnerella vaginalis AMD] Length = 153 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 2/151 (1%) Query: 1 MKKGNVF-MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILA 58 M+ VF M+ AL A+ +A E+PVGAV + II + N + D AHAE+LA Sbjct: 3 MRDEIVFAMNQALNLARESASAGEVPVGAVVLDGGGNIIGKGANMREQSADPLAHAEVLA 62 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 ++ L + L VTLEPC MCA A+ R++R+ +GA + K G + Sbjct: 63 MKDAAISRKSWNLSDCTLVVTLEPCPMCAGAVLQTRLKRVIFGAWDAKLGACGSVWDILR 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 PE+ + E +++++FF +R Sbjct: 123 DPHVGSRPEVIGSVCESECARLLRNFFAHQR 153 >gi|290959146|ref|YP_003490328.1| deaminase [Streptomyces scabiei 87.22] gi|260648672|emb|CBG71785.1| putative deaminase [Streptomyces scabiei 87.22] Length = 183 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 19/160 (11%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEI--------- 56 M AL EA AA ++PVGAV + + +++ N D TAHAE+ Sbjct: 24 MRLALAEAGRAAEGGDVPVGAVVLSPDGTTVLATGHNEREATGDPTAHAEVLALRRAAAA 83 Query: 57 --------LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 + G R + L + L VTLEPCTMCA A+ +RI R+ YGA + K G Sbjct: 84 LRATGARGSSAEEGGRRTGEWRLTDCTLVVTLEPCTMCAGALVQSRIDRVVYGARDEKAG 143 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + +H PE+ G+ +++ +FF+ R Sbjct: 144 ATGSLWDVVRDRRLNHRPEVVEGVLADDCARLLTEFFRTR 183 >gi|209518682|ref|ZP_03267499.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. H160] gi|209500881|gb|EEA00920.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. H160] Length = 230 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 76/146 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM+ A A+ E+PVGAV V +++I+ N D +AHAE++A+R Sbjct: 57 ERDLRFMALAQAAAEEGRAAGEVPVGAVLVRGDEVIATGFNHPIGAHDPSAHAEMVALRA 116 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LP +LYVTLEPC MCA AI ARI R+ +GA +PK G + + Sbjct: 117 AAQSLENYRLPGCELYVTLEPCLMCAGAIMHARISRVVFGARDPKTGACGSVVDAFANPQ 176 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147 +H + G+ E ++ FF E Sbjct: 177 LNHHTTVSGGVLEAECSAALRSFFAE 202 >gi|224541628|ref|ZP_03682167.1| hypothetical protein CATMIT_00799 [Catenibacterium mitsuokai DSM 15897] gi|224525466|gb|EEF94571.1| hypothetical protein CATMIT_00799 [Catenibacterium mitsuokai DSM 15897] Length = 147 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 3/147 (2%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ AL+EA+ A +E+P+G + V +II+R N+ LK T HAEILAI Sbjct: 2 SDEEYMAEALKEAEIAMSEDEVPIGCIIVYEGQIIARTHNQKETLKKATGHAEILAINQA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L +YVTLEPC MC AI +R+ RL GA+ K G + Sbjct: 62 SEYLDLWHLDGCTMYVTLEPCMMCTGAIIQSRMSRLVIGANVSKWPGF---IELIENNPV 118 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P++ GI +++ I+ +FFK +R Sbjct: 119 NHHPDVQQGILKEQCATIVSEFFKRKR 145 >gi|148242392|ref|YP_001227549.1| tRNA-specific adenosine deaminase [Synechococcus sp. RCC307] gi|147850702|emb|CAK28196.1| tRNA-specific adenosine deaminase [Synechococcus sp. RCC307] Length = 183 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M L A A R E+PV AV + + I NR +D HAE++A+R + Sbjct: 27 WMDRLLRLAAKAGQRGEVPVAAVVIDPLGRAIGWGSNRREAAQDPLGHAELVALRQASSL 86 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L VTLEPC MCA A+ AR+ R+ +GAS+PK G + T A+ HH Sbjct: 87 RRDWRFNQHTLLVTLEPCPMCAGALVQARMGRVVFGASDPKRGALGGCLNLSTDASAHHH 146 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + R+ +Q +F+++R Sbjct: 147 MEVIGGVRGEACREQLQAWFRQQR 170 >gi|330892455|gb|EGH25116.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. mori str. 301020] gi|330894515|gb|EGH27176.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. mori str. 301020] Length = 169 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM AL A AL E+PVGAV V N +II R N D +AHAE++A+R Sbjct: 10 SKDQDFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISASDPSAHAEMVAVRD 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ Sbjct: 70 AARALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 130 LNHRVLFEGGVLSEECGAMLSEFFRMRR 157 >gi|124008183|ref|ZP_01692880.1| cytosine deaminase [Microscilla marina ATCC 23134] gi|123986282|gb|EAY26104.1| cytosine deaminase [Microscilla marina ATCC 23134] Length = 154 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 86/151 (56%), Gaps = 5/151 (3%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A +EA A + EIPVGAV V+ +KII+RA N+ +L DVTAHAEILA+ Sbjct: 3 DEFYMQQAYKEAVIAYNKGEIPVGAVVVVQDKIIARAHNQTEQLLDVTAHAEILAVTGAA 62 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG--IEN---GTQFYT 118 L + L + +YVTLEPC MCA AI+ +++ RL +GA + K G IE+ GT Sbjct: 63 NYLGAKYLNQCTMYVTLEPCVMCAGAIAWSQLGRLVFGAYDVKRGFSRIESATEGTNNKV 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H G+ E +++Q FF++ R Sbjct: 123 TKLLHPKTLQVGGVLENECAELLQRFFQKLR 153 >gi|254252116|ref|ZP_04945434.1| Cytidine/deoxycytidylate deaminase [Burkholderia dolosa AUO158] gi|124894725|gb|EAY68605.1| Cytidine/deoxycytidylate deaminase [Burkholderia dolosa AUO158] Length = 206 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 75/143 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A A+ A E+PVGAV V +++I+R N D +AHAE+ A+RM Sbjct: 43 RDAHFMRLAQAAAEEARAAGEVPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMA 102 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L +P +LYVTLEPC MCA AI ARI R+ YGA +PK G + + Sbjct: 103 AQRLQNYRMPGCELYVTLEPCLMCAGAIMHARIARVVYGAPDPKTGACGSVIDAFANTQL 162 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 +H E+ G+ ++ FF Sbjct: 163 NHHAEVIGGVLADECGAALKSFF 185 >gi|257487178|ref|ZP_05641219.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331009206|gb|EGH89262.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 169 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 81/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM AL A AL E+PVGAV V N +II R N D +AHAE++A+R Sbjct: 10 SKDQDFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISASDPSAHAEMVAVRD 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L LP LYVTLEPC+MCA I +R+ R+ YGA PK G +++ QF++ Sbjct: 70 AARALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGF 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + ++ +FF+ RR Sbjct: 130 LNHRVLFEGGVLSEECGAMLSEFFRMRR 157 >gi|152989527|ref|YP_001346733.1| hypothetical protein PSPA7_1349 [Pseudomonas aeruginosa PA7] gi|150964685|gb|ABR86710.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 182 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL EA+ AA E+PVGAV V +II R N+ D +AHAE++AIRM Sbjct: 26 SRDPHFMREALAEAEKAAALGEVPVGAVLVREGEIIGRGFNQPISSHDPSAHAEMVAIRM 85 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 LP LYVTLEPC MC+ + ARI+RL YG PK G +E+ +F+ Sbjct: 86 AAAEAGNYRLPGSTLYVTLEPCGMCSGLLVHARIQRLVYGTLEPKSGAVESRGRFFEQEH 145 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + Q + FF+ RR Sbjct: 146 LNHRVMVEGGVLAEECSQALSAFFRARR 173 >gi|298252974|ref|ZP_06976766.1| cytidine and deoxycytidylate deaminase [Gardnerella vaginalis 5-1] gi|297532369|gb|EFH71255.1| cytidine and deoxycytidylate deaminase [Gardnerella vaginalis 5-1] Length = 153 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 2/151 (1%) Query: 1 MKKGNVF-MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILA 58 M+ VF M+ AL A+ +A E+PVGAV + II + N + D AHAE+LA Sbjct: 3 MRDEIVFAMNQALNLARESASAGEVPVGAVVLDGGGNIIGKGANMREQSADPLAHAEVLA 62 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 ++ L + L VTLEPC MCA A+ R++R+ +GA + K G + Sbjct: 63 MKDAAASRKSWNLSDCTLVVTLEPCPMCAGAVLQTRLKRVIFGAWDAKLGACGSVWDILR 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 PE+ + E Q +++FF +R Sbjct: 123 DPHVGSRPEVIGSVCESECAQPLRNFFAHQR 153 >gi|259650544|dbj|BAI42706.1| putative cytosine/adenosine deaminase [Lactobacillus rhamnosus GG] Length = 170 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 52/128 (40%), Positives = 69/128 (53%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+P+GAV V + +II R N +D T HAEILAI+ CR L L + L+VTLE Sbjct: 26 GEVPIGAVVVHDQQIIGRGYNLRETTQDATQHAEILAIQAACRQLGTWRLEDCSLFVTLE 85 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA + ARI Y+GA++PK G +H + PGI S ++ Sbjct: 86 PCPMCAGTMINARIATCYFGATDPKAGVAGTFYNLLEDTRFNHQVAVVPGIQAIASAALL 145 Query: 142 QDFFKERR 149 QDFF+ R Sbjct: 146 QDFFRAIR 153 >gi|298714567|emb|CBJ27558.1| conserved unknown protein [Ectocarpus siliculosus] Length = 504 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 8/156 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV------LNNK--IISRAGNRNRELKDVTAH 53 + + FM AL A A + E+P+GA+ + + ++S N +D +AH Sbjct: 333 EDDDRFMRMALRLAGRARMEGEVPIGAILAETVPTRRDGRRRVLSTGRNEVEGRRDASAH 392 Query: 54 AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 AE+L ++ + S L LYVT+EPC MC +A L R+ R+ +GA NP G Sbjct: 393 AEMLCLQAAAKARSNWRLAGTTLYVTVEPCAMCLSAAQLFRVDRVVFGAPNPNLGACGGW 452 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + H E+ G+ + ++ FF+ RR Sbjct: 453 VDLSSQRHAFHELEVKGGVLAEECALPLRGFFRSRR 488 >gi|319898379|ref|YP_004158472.1| Cytosine/adenosine deaminase [Bartonella clarridgeiae 73] gi|319402343|emb|CBI75882.1| Cytosine/adenosine deaminase [Bartonella clarridgeiae 73] Length = 150 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 75/142 (52%), Positives = 94/142 (66%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EAQ+A + EIPVGAV II+RAGN + D T HAE+ IR+ C+I Sbjct: 6 MEIALLEAQSAKKQAEIPVGAVITHGKTIIARAGNYIKTPYDPTGHAEMRVIRIACQIFK 65 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E +PE DLYVTLEPC MCAAAIS ARIR LYY + KGG IE+G +FY TCHH P Sbjct: 66 SERIPECDLYVTLEPCAMCAAAISFARIRNLYYATQDSKGGAIEHGPRFYQQPTCHHRPN 125 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G E+ + +++DFF ++R Sbjct: 126 VYSGFKEREATLLLKDFFSQKR 147 >gi|303320905|ref|XP_003070447.1| Cytidine and deoxycytidylate deaminase zinc-binding domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240110143|gb|EER28302.1| Cytidine and deoxycytidylate deaminase zinc-binding domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|320033053|gb|EFW15002.1| tRNA-specific adenosine deaminase subunit TAD2 [Coccidioides posadasii str. Silveira] Length = 207 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 47/144 (32%), Positives = 69/144 (47%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL+ A+ A E PVG V V + K+I R N + T HAE LAI Sbjct: 28 HEQFMREALQMAEQALAIGETPVGCVLVHDGKVIGRGMNDTNRSLNGTRHAEFLAIEEAL 87 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R + I DLYVT+EPC MCA+ + IRR+++G N + GG ++ Sbjct: 88 RSYPRSIFRTTDLYVTVEPCIMCASLLRQNYIRRVFFGCVNDRFGGTGGVLNLHSDRAID 147 Query: 124 HSPEIYPGISEQRSRQIIQDFFKE 147 +Y GI + +++ F+ + Sbjct: 148 PPYTVYGGIFRNEAIMLLRRFYIQ 171 >gi|217979352|ref|YP_002363499.1| CMP/dCMP deaminase zinc-binding [Methylocella silvestris BL2] gi|217504728|gb|ACK52137.1| CMP/dCMP deaminase zinc-binding [Methylocella silvestris BL2] Length = 146 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 70/129 (54%), Positives = 90/129 (69%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 R E+PVGAV V + I++RAGNR D TAHAE+L IR R L + L DLYVTL Sbjct: 18 RGEVPVGAVIVRDGAILARAGNRTLADDDPTAHAEMLTIRAAARALGSQRLAGCDLYVTL 77 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCAAAIS AR+RRLY+ A +PKGG +E+G +F+ TCHH+PE+Y G+ +S + Sbjct: 78 EPCAMCAAAISFARVRRLYFAALDPKGGAVEHGPRFFAQPTCHHAPEVYEGLRASQSADL 137 Query: 141 IQDFFKERR 149 ++ FF ERR Sbjct: 138 LRRFFAERR 146 >gi|294790273|ref|ZP_06755431.1| tRNA-specific adenosine deaminase [Scardovia inopinata F0304] gi|294458170|gb|EFG26523.1| tRNA-specific adenosine deaminase [Scardovia inopinata F0304] Length = 185 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 M+ AL+ A AA ++PVGAV + N ++IS+ N+ + D +HAEI A+R Sbjct: 34 SDEQAMALALKNAVRAAQAGDVPVGAVLLDNRGRLISQGYNQRQARADPLSHAEIEALRA 93 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 ++ L L VT+EPC MCA A + R+ +G +PK G + Sbjct: 94 AGQVKGDWNLAGCSLIVTMEPCPMCAGAAVSVHLGRIVFGTWDPKMGACGSVWDIPRDPH 153 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 PE+ GI Q +++ FF++ R Sbjct: 154 VGSQPEVVGGILRQDCSRLLSHFFQKTR 181 >gi|15837614|ref|NP_298302.1| hypothetical protein XF1012 [Xylella fastidiosa 9a5c] gi|9105950|gb|AAF83822.1|AE003939_1 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 167 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 2/149 (1%) Query: 3 KGNVFMSCALEEAQNAALR-NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 + +M AL A AA +EIPVGAV + ++ N N D +AHAEI+A+R Sbjct: 12 EHIHWMRHALTLAHRAATEFDEIPVGAVLISPEGTLLGEGWNYNITSHDPSAHAEIMALR 71 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L +P LYVTLEPC MCA AI ARI L Y A++PK G + Sbjct: 72 AAGHQLRNHRMPGCTLYVTLEPCLMCAMAIIHARIAHLIYAAADPKTGACGSTFDILNDP 131 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +Y G+ + + + + ++F+ +R Sbjct: 132 RHNHHVHVYGGLLAEEASRRLTNYFRTKR 160 >gi|256545480|ref|ZP_05472842.1| tRNA-specific adenosine deaminase [Anaerococcus vaginalis ATCC 51170] gi|256398876|gb|EEU12491.1| tRNA-specific adenosine deaminase [Anaerococcus vaginalis ATCC 51170] Length = 157 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 50/143 (34%), Positives = 80/143 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A+ EA+ A L +E+P+G V V + KII+R+ N + K HAEILAI Sbjct: 2 DDIFYMKEAINEAKLARLEDEVPIGCVIVKDEKIIARSHNYTYKGKSALKHAEILAIDKA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L + +YVT+EPC+MCA AI +RI+RL G ++ K G + T + Sbjct: 62 SKYVGDFRLEDCTMYVTMEPCSMCAGAIINSRIKRLVIGLADVKRGACGSNTNITGDRSQ 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 H + G+ ++ S +++Q+FF Sbjct: 122 LHYLDAEFGLMKEESLELLQNFF 144 >gi|312879894|ref|ZP_07739694.1| tRNA-adenosine deaminase [Aminomonas paucivorans DSM 12260] gi|310783185|gb|EFQ23583.1| tRNA-adenosine deaminase [Aminomonas paucivorans DSM 12260] Length = 152 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 56/142 (39%), Positives = 75/142 (52%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EA+ A EIPVGAVAV + +I+ R NR + + AHAE+ A+R C L Sbjct: 1 MGEALAEARLALEEGEIPVGAVAVDHGRIVGRGRNRRKLQEAPFAHAEMEALRDACASLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L V LYVTLEPC MCA AI R+ RL +GA +P+ G + H Sbjct: 61 TWRLDGVTLYVTLEPCPMCAGAILQTRVGRLVFGARDPRAGACGSLVDLLRDPRQTHRCR 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ + + ++ DFF RR Sbjct: 121 VREGVGREEAACLLGDFFLLRR 142 >gi|317055943|ref|YP_004104410.1| CMP/dCMP deaminase zinc-binding protein [Ruminococcus albus 7] gi|315448212|gb|ADU21776.1| CMP/dCMP deaminase zinc-binding protein [Ruminococcus albus 7] Length = 158 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 55/151 (36%), Positives = 81/151 (53%), Gaps = 3/151 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILA 58 M + ++M ALE A AA +E+PVGAV V +I+ R NR + HAEI+A Sbjct: 1 MTRDEMYMRKALELAALAADEDEVPVGAVVVKKSTGEIVGRGFNRREYGRSPLTHAEIVA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I R L L + +L+VTLEPC MCA A+ +R+ R+ +GA + K G + + Sbjct: 61 IDEASRKLGGWRLIDCELFVTLEPCPMCAGAVINSRVERVVFGAYDKKAGSCGSVVDLFG 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 L +H PE G+ E+ ++ +FFK R Sbjct: 121 LPY-NHKPECIGGVLEEECAAVLTEFFKGLR 150 >gi|256831602|ref|YP_003160329.1| CMP/dCMP deaminase zinc-binding [Jonesia denitrificans DSM 20603] gi|256685133|gb|ACV08026.1| CMP/dCMP deaminase zinc-binding [Jonesia denitrificans DSM 20603] Length = 154 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 58/146 (39%), Positives = 75/146 (51%), Gaps = 4/146 (2%) Query: 8 MSCALEEAQNAA-LRN--EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M AL EA+ A L ++P+GAV + + I+ A N +D TAHAEILAIR Sbjct: 1 MDDALTEARRALRLHGPPDVPIGAVIIDAHGHTIAAAHNERELTQDPTAHAEILAIRKAA 60 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L L + L VTLEPC MCA AI LARI R+ GA +PK G + + Sbjct: 61 THLGTWRLDQCTLVVTLEPCAMCAGAIVLARIPRIVIGAWDPKAGATGSVFDIVRAPQLN 120 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ PGI S ++ +FF R Sbjct: 121 HFVEVIPGIRAADSATLLTEFFATHR 146 >gi|139439263|ref|ZP_01772705.1| Hypothetical protein COLAER_01720 [Collinsella aerofaciens ATCC 25986] gi|133775287|gb|EBA39107.1| Hypothetical protein COLAER_01720 [Collinsella aerofaciens ATCC 25986] Length = 593 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 78/146 (53%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FMS AL EA+ AA E+P+GAV V +I++RA NR +D +AHAE A+ Sbjct: 7 DEKFMSEALAEARAAAAVGEVPIGAVVVRAGEIVARAHNRRELDQDPSAHAEFSALCAAA 66 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L + L + +YVTLEPC MCA + AR+ R YGA++ K G + + + + Sbjct: 67 QSLGRWRLSDCTVYVTLEPCCMCAGLMVNARVGRCVYGAADAKAGALGSLYDLNADSRLN 126 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ R+++ +F R Sbjct: 127 HRFNVRAGVLADECREVLSSYFSGLR 152 >gi|320009620|gb|ADW04470.1| CMP/dCMP deaminase zinc-binding protein [Streptomyces flavogriseus ATCC 33331] Length = 142 Score = 187 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 52/142 (36%), Positives = 74/142 (52%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA AA ++PVGAV + + +++ N D TAHAE+LA+R L Sbjct: 1 MRQALDEAAQAASAGDVPVGAVVLGPDGALLATGHNEREASHDPTAHAEVLALRRAAAAL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA A+ +R+ R+ YGA + K G + +H P Sbjct: 61 GSWRLTGCTLVVTLEPCTMCAGALVQSRVARVVYGARDEKAGAAGSLWDVVRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 E+ G+ E ++ FF+ER Sbjct: 121 EVIHGVLEDLCADLLTAFFRER 142 >gi|291295391|ref|YP_003506789.1| tRNA(Ile)-lysidine synthetase [Meiothermus ruber DSM 1279] gi|290470350|gb|ADD27769.1| tRNA(Ile)-lysidine synthetase [Meiothermus ruber DSM 1279] Length = 521 Score = 187 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 81/148 (54%), Gaps = 7/148 (4%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M ALE+A+ A E+P+GAV V + ++++ A N+ + D TAHAE+LA++ Sbjct: 378 SEDLEHMRSALEQARLAQQAGEVPIGAVVVWDGEVLAEAHNQVEQQCDATAHAELLALQQ 437 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 ++LP +YVTLEPC MC A+ A++RR+ Y N K G + T+ Sbjct: 438 ALHKRHSKVLPGATVYVTLEPCPMCFGALMEAQVRRVVYAVENLKAGAV-------TVHR 490 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 E G E+ S ++++DFF ++R Sbjct: 491 MKPPFEWEGGWLERESAKLLRDFFSQKR 518 >gi|254384103|ref|ZP_04999448.1| cytidine/deoxycytidine deaminase [Streptomyces sp. Mg1] gi|194342993|gb|EDX23959.1| cytidine/deoxycytidine deaminase [Streptomyces sp. Mg1] Length = 142 Score = 187 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 50/142 (35%), Positives = 74/142 (52%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA A ++PVGAV + + ++++ N D TAHAE+LA+R L Sbjct: 1 MRLALREAARAVPAGDVPVGAVVLGPDGELLATGYNEREATGDPTAHAEVLALRRAAAAL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + LP L VTLEPC MCA A+ AR+ R+ YGA + K G + +H P Sbjct: 61 GEWRLPGCTLVVTLEPCVMCAGALVQARVARVVYGAGDEKAGAAGSLWDLVRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 E+ G+ + + + DFF++ Sbjct: 121 EVIRGVLAEECARQLTDFFRDL 142 >gi|161524475|ref|YP_001579487.1| CMP/dCMP deaminase zinc-binding [Burkholderia multivorans ATCC 17616] gi|221215505|ref|ZP_03588469.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD1] gi|160341904|gb|ABX14990.1| CMP/dCMP deaminase zinc-binding [Burkholderia multivorans ATCC 17616] gi|221164689|gb|EED97171.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD1] Length = 187 Score = 187 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 53/145 (36%), Positives = 78/145 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM AL A+ A E+PVGAV V +++++R N D +AHAE+ A+RM Sbjct: 24 RDVHFMRLALAAAEEARAAGEVPVGAVLVRGDEVLARGFNHPIGGHDPSAHAEMAALRMA 83 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L +P +LYVTLEPC MCA AI ARI R+ +GA++PK G + + Sbjct: 84 AQHLQNYRMPGCELYVTLEPCLMCAGAIMHARIARVVFGAADPKTGVCGSVMDAFANPQL 143 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKE 147 +H E+ G+ ++ FF E Sbjct: 144 NHHTEVVGGVLAHECGAALKSFFAE 168 >gi|224283917|ref|ZP_03647239.1| Cytosine/adenosine deaminase [Bifidobacterium bifidum NCIMB 41171] gi|313141068|ref|ZP_07803261.1| cytosine/adenosine deaminase [Bifidobacterium bifidum NCIMB 41171] gi|313133578|gb|EFR51195.1| cytosine/adenosine deaminase [Bifidobacterium bifidum NCIMB 41171] Length = 150 Score = 187 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+ + A + ++PVGAV + +I R NR D AHAEI A+R + Sbjct: 8 MCEAIALGERAGKQGDVPVGAVVLDERGTVIGRGRNRREAGHDPLAHAEIEAMREAAQAR 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPC MCA A I R+ +GA + K G + H P Sbjct: 68 GDWNLADCTLVVTLEPCPMCAGACIQTHIGRIVFGAWDAKLGACGSIWDIPRDPHVGHVP 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E +++ FF RR Sbjct: 128 QVVGGVREAACARLLTGFFASRR 150 >gi|283783769|ref|YP_003374523.1| cytidine and deoxycytidylate deaminase zinc-binding region [Gardnerella vaginalis 409-05] gi|283442021|gb|ADB14487.1| cytidine and deoxycytidylate deaminase zinc-binding region [Gardnerella vaginalis 409-05] Length = 153 Score = 187 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 2/151 (1%) Query: 1 MKKGNVF-MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILA 58 M+ VF M+ AL A+ +A E+PVGAV + II + N + D AHAE+LA Sbjct: 3 MRDEIVFAMNQALNLARESASAGEVPVGAVVLDGSGNIIGKGANMREQSADPLAHAEVLA 62 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 ++ L + L VTLEPC MCA A+ R++R+ +GA + K G + Sbjct: 63 MKDAATSRKSWNLSDCTLVVTLEPCPMCAGAVLQTRLKRVIFGAWDAKLGACGSVWDILR 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 PE+ + E Q ++ FF +R Sbjct: 123 DPHVGSRPEVIGSVCEPECAQPLRTFFAHQR 153 >gi|254293360|ref|YP_003059383.1| CMP/dCMP deaminase zinc-binding [Hirschia baltica ATCC 49814] gi|254041891|gb|ACT58686.1| CMP/dCMP deaminase zinc-binding [Hirschia baltica ATCC 49814] Length = 154 Score = 187 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 64/154 (41%), Positives = 92/154 (59%), Gaps = 5/154 (3%) Query: 1 MKKGNV--FMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEI 56 MK+ +M+ A++ A+ AAL E+PVGAV V I+ N D TAHAEI Sbjct: 1 MKEAEQMPYMARAMQLAEEAALAGEVPVGAVIVDPSTGNIVGEGRNGPIGAHDPTAHAEI 60 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 +AIR C + LP+++LYVTLEPC MCA AIS ARI ++ + A +PKGG I++G +F Sbjct: 61 VAIRNACASVDNYRLPDLELYVTLEPCAMCAGAISFARIGKVVFAADDPKGGAIKHGPKF 120 Query: 117 YTLATCHHSPEIYPGIS-EQRSRQIIQDFFKERR 149 + +TCH + I + ++++ FFK RR Sbjct: 121 FEQSTCHWRSQWEQDIRFASEAGEMLRAFFKSRR 154 >gi|254390387|ref|ZP_05005604.1| deaminase [Streptomyces clavuligerus ATCC 27064] gi|197704091|gb|EDY49903.1| deaminase [Streptomyces clavuligerus ATCC 27064] Length = 142 Score = 187 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 1/128 (0%) Query: 22 NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PVGAV + + ++ N D TAHAE+LAIR R + L + L VTL Sbjct: 15 GDVPVGAVVLAADGTRLATGHNERELTGDPTAHAEVLAIRRAARRIGGWRLSDCTLVVTL 74 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA AI+ +R+ R+ YGA + K G + + +H PE+ G+ E ++ Sbjct: 75 EPCTMCAGAITQSRVGRVVYGARDEKAGAVGSLWDVVRDRRLNHRPEVIIGVLEPECARL 134 Query: 141 IQDFFKER 148 + DFF+ R Sbjct: 135 MTDFFRHR 142 >gi|56551192|ref|YP_162031.1| CMP/dCMP deaminase zinc-binding protein [Zymomonas mobilis subsp. mobilis ZM4] gi|260753167|ref|YP_003226060.1| CMP/dCMP deaminase zinc-binding [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|9931341|gb|AAG02151.1|AF212041_7 nitrogen fixation protein [Zymomonas mobilis subsp. mobilis ZM4] gi|56542766|gb|AAV88920.1| CMP/dCMP deaminase zinc-binding protein [Zymomonas mobilis subsp. mobilis ZM4] gi|258552530|gb|ACV75476.1| CMP/dCMP deaminase zinc-binding protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 160 Score = 187 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 66/143 (46%), Positives = 95/143 (66%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRIL 66 M AL +A++AA + E+PVGAV KII+ AGN + D T HAE+ A+R +L Sbjct: 17 MRQALLQAESAAHQGEVPVGAVVTFKGKIIAVAGNAMQPPFIDPTGHAEVRALRQAASVL 76 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + DL+VTLEPC MCA AI+ ARIRRLYYGA +PKGG + +G + + +CHH P Sbjct: 77 GSSRLDQCDLWVTLEPCAMCAGAIATARIRRLYYGADDPKGGAVLSGVRLFFQPSCHHQP 136 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EIY + +++ ++++ FFK++R Sbjct: 137 EIYNDLGSRKASELLRQFFKQKR 159 >gi|262375359|ref|ZP_06068592.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] gi|262309613|gb|EEY90743.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] Length = 171 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 81/148 (54%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A E+A AA + EIPVGA+ V N+II + N L D TAHAEI+A+R Sbjct: 7 TDEYWMQRAYEQAALAAAQGEIPVGAIIVSQNQIIGQGFNAPISLNDPTAHAEIVALRDA 66 Query: 63 CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C+ + LP + LYVTLEPCTMC A+ +R+ R+ +GA K G + + Q + Sbjct: 67 CQNIQNYRLPDDAVLYVTLEPCTMCVGALVHSRVSRVVFGAFEAKAGSLVSARQLFETGY 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G +Q+ + + FFK RR Sbjct: 127 YNHVFPFQAGCMQQQCSEQLSAFFKLRR 154 >gi|114320177|ref|YP_741860.1| tRNA-adenosine deaminase [Alkalilimnicola ehrlichii MLHE-1] gi|114226571|gb|ABI56370.1| tRNA-adenosine deaminase [Alkalilimnicola ehrlichii MLHE-1] Length = 164 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 49/137 (35%), Positives = 73/137 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL A A E+PVGAV VL+++ ++ N+ +D TAHAE++A+R Sbjct: 14 EDIRWMRRALALADQAEAAGEVPVGAVLVLDDREVAVGSNQPITARDPTAHAEVVALRRA 73 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L L LYVTLEPCTMC AI AR++R+ + AS+PK G + Sbjct: 74 GEVLGAYRLSGTTLYVTLEPCTMCIGAIIHARVKRVVFAASDPKTGACGSVFALADAPEH 133 Query: 123 HHSPEIYPGISEQRSRQ 139 +H PE+ G+ + Sbjct: 134 NHHPEVVGGLLATEAGD 150 >gi|83647619|ref|YP_436054.1| cytosine/adenosine deaminases [Hahella chejuensis KCTC 2396] gi|83635662|gb|ABC31629.1| Cytosine/adenosine deaminases [Hahella chejuensis KCTC 2396] Length = 156 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 47/128 (36%), Positives = 68/128 (53%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 +E+PVGA+ V + +++ N+ D TAHAEI AIR + LP LYVTLE Sbjct: 15 DEVPVGAILVRDGQVLGEGWNQPIRSHDPTAHAEISAIRKASAVAGNYRLPGSTLYVTLE 74 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC A+ AR+ RL +GA K G + + ++ + E G+ EQ Q++ Sbjct: 75 PCVMCLGALVHARVSRLVFGAYEHKAGAVCSSSRLLDEHNFNWKLEWSGGVLEQPCSQLL 134 Query: 142 QDFFKERR 149 FF+ RR Sbjct: 135 SGFFQRRR 142 >gi|315503317|ref|YP_004082204.1| cmp/dcmp deaminase zinc-binding protein [Micromonospora sp. L5] gi|315409936|gb|ADU08053.1| CMP/dCMP deaminase zinc-binding protein [Micromonospora sp. L5] Length = 208 Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 6/151 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNE-----IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAE 55 ++ ++M ALE A +PVGAV + ++ N D TAHAE Sbjct: 58 QRHELWMRRALEVAVTGPDDATPDADDVPVGAVLYGPDGAELAIGRNERELTGDPTAHAE 117 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +LA+R + L + L + L VTLEPCTMCA AI+LAR+ + +GA PK G + + Sbjct: 118 VLALRRAAQRLGRWRLDDCTLVVTLEPCTMCAGAIALARVSTVVFGAWEPKTGAVGSLWD 177 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 H PE+Y G+ E+ S +++ FF+ Sbjct: 178 VLRDRRVTHRPEVYGGVLERESATLLRAFFR 208 >gi|254499275|ref|ZP_05111951.1| deaminase [Legionella drancourtii LLAP12] gi|254351519|gb|EET10378.1| deaminase [Legionella drancourtii LLAP12] Length = 143 Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 49/143 (34%), Positives = 70/143 (48%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A E+A A E+PVGAV V N +++ + N + D + HAE+ IR + L Sbjct: 1 MQQAYEQAFLAQNEGEVPVGAVLVSNEGELLGASRNAVQNSHDPSDHAEVRVIRQAAQQL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + LYVTLEPC MCA I ARI+R+ + + K G + +H Sbjct: 61 KNHRLLDTTLYVTLEPCPMCAGLIVHARIKRVVFATRDFKAGAAGSVYNLLQGYPLNHKV 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 +I GI + ++ DFFK R Sbjct: 121 QIDEGIMQSECALLLSDFFKACR 143 >gi|332654745|ref|ZP_08420487.1| cytidine/deoxycytidylate deaminase family protein [Ruminococcaceae bacterium D16] gi|332516088|gb|EGJ45696.1| cytidine/deoxycytidylate deaminase family protein [Ruminococcaceae bacterium D16] Length = 152 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 53/129 (41%), Positives = 69/129 (53%), Gaps = 1/129 (0%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PVG V V + KI+ NR E D TAHAE+ AIR C L L LYVTL Sbjct: 20 HGDVPVGCVIVKDGKIVGEGRNRREEHGDATAHAELEAIRDACARLGSWRLHGCTLYVTL 79 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA I +RI + YGA + K G + + +H P IY G E + ++I Sbjct: 80 EPCPMCAGGIINSRIETVRYGARDEKAGCCSSVLNLFEE-RFNHHPRIYRGPLEPQCQKI 138 Query: 141 IQDFFKERR 149 +QDFF + R Sbjct: 139 LQDFFLDLR 147 >gi|189468213|ref|ZP_03016998.1| hypothetical protein BACINT_04609 [Bacteroides intestinalis DSM 17393] gi|189436477|gb|EDV05462.1| hypothetical protein BACINT_04609 [Bacteroides intestinalis DSM 17393] Length = 139 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 60/142 (42%), Positives = 78/142 (54%), Gaps = 5/142 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL EA+ AA R E+PVGA+ V +II+RA N L DVTAHAE+ AI L Sbjct: 1 MKQALVEARKAAERGEVPVGAIVVCKERIIARAHNLTETLTDVTAHAEMQAITAAASTLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L E LYVT+EPC MCA AI+ A++ RL +GA + K G Q Y H Sbjct: 61 GKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAEDEKRG-----YQRYAPQALHPKTV 115 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + GI +++DFF +R Sbjct: 116 VVKGILADDCAALMKDFFAAKR 137 >gi|292572491|gb|ADE30406.1| Cytosine deaminase [Rickettsia prowazekii Rp22] Length = 163 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 67/148 (45%), Positives = 98/148 (66%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL++A+ A +NE+PVG V V N KII + N E K+ HAEI+AI Sbjct: 12 NNFFMEQALKQARLAFDKNEVPVGVVIVCRLNQKIIVSSHNNIEEKKNPLCHAEIIAINT 71 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C ++S + L + D+YVTLEPC MCA+AIS +R++RL+YGAS+ K G +E+ +++ + Sbjct: 72 ACNLISSKNLNDYDIYVTLEPCAMCASAISHSRLKRLFYGASDSKHGAVESNLRYFNSNS 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 C + PEIY GI + SR ++Q+FF+ R Sbjct: 132 CFYRPEIYSGILSEHSRFLMQEFFQRIR 159 >gi|299770395|ref|YP_003732421.1| putative deaminase [Acinetobacter sp. DR1] gi|298700483|gb|ADI91048.1| putative deaminase [Acinetobacter sp. DR1] Length = 158 Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats. Identities = 56/139 (40%), Positives = 76/139 (54%), Gaps = 1/139 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A E+A+ AA + EIPVGA+ V N++I N L D TAHAEI AIR C L+ Sbjct: 1 MQLAYEQAELAAQQGEIPVGAIVVSQNRVIGSGYNAPISLLDPTAHAEIQAIRAACLSLN 60 Query: 68 QEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP + LYVTLEPCTMC A+ ARI+ + +G + PK G + + Q +H Sbjct: 61 NYRLPDDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLQDGYYNHRF 120 Query: 127 EIYPGISEQRSRQIIQDFF 145 G +++ Q + FF Sbjct: 121 TFQQGCLQEKCAQQLSHFF 139 >gi|81300665|ref|YP_400873.1| tRNA-adenosine deaminase [Synechococcus elongatus PCC 7942] gi|81169546|gb|ABB57886.1| tRNA-adenosine deaminase [Synechococcus elongatus PCC 7942] Length = 168 Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + +M+ A E+A A EIP+GAV V +++ NR +D HAEI+AIR Sbjct: 15 ETHHRWMTIAYEQAVIAGTAGEIPIGAVIVHQGHLLATGQNRRERDRDPCGHAEIIAIRA 74 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L + LYVTLEPC MCA AI AR+ +L Y A +PK G I + Sbjct: 75 AAARIGDWRLSDCQLYVTLEPCPMCAGAIIQARLGQLIYAADDPKAGAIRSLLNLPDSPV 134 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 HH + GI + Q+++D+F++RR Sbjct: 135 SHHHLSVLAGILAEPCGQLLRDWFQQRR 162 >gi|68172021|ref|ZP_00545314.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Ehrlichia chaffeensis str. Sapulpa] gi|88658306|ref|YP_507267.1| cytidine and deoxycytidylate deaminase family protein [Ehrlichia chaffeensis str. Arkansas] gi|67998558|gb|EAM85318.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Ehrlichia chaffeensis str. Sapulpa] gi|88599763|gb|ABD45232.1| cytidine and deoxycytidylate deaminase family protein [Ehrlichia chaffeensis str. Arkansas] Length = 140 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 78/142 (54%), Positives = 96/142 (67%), Gaps = 4/142 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ +AQ E+PVGAV V NN++IS A N N D TAHAEILAIR C+ILS Sbjct: 1 MKLAISKAQE--DLLEVPVGAVIVHNNEVISSANNSNIHDIDPTAHAEILAIRNACKILS 58 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 IL + D+YVTLEPC MCA AIS ++IRRLY+GA N K G IENG + + CHH PE Sbjct: 59 THILNQCDIYVTLEPCAMCAQAISFSKIRRLYFGAYNKKYGAIENGARIFQF--CHHVPE 116 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y GI E + ++I DFFK+ R Sbjct: 117 VYGGILEAENTKLITDFFKKLR 138 >gi|197294746|ref|YP_001799287.1| Cytidine/deoxycytidylate deaminase family protein [Candidatus Phytoplasma australiense] gi|171854073|emb|CAM12046.1| Cytidine/deoxycytidylate deaminase family protein [Candidatus Phytoplasma australiense] Length = 166 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 82/148 (55%), Gaps = 1/148 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM A +EA A L+ E+PVGAV VLNN+II+RA N ++ HAE LA+ Sbjct: 5 DKNLFFMKAAFQEAYKAYLKKEVPVGAVVVLNNQIIARAHNNRKQKNLFFGHAEFLALIK 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L +YVTLEPC MCA A+ A ++ +YYGA++ K G I++ + L Sbjct: 65 ANKKLKNRRLTNSSVYVTLEPCLMCAGALIQAGVKHVYYGAADSKTGCIKSLLTSFELP- 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G Q S +++ FF++ R Sbjct: 124 LPHKVIAHSGFLAQESSDLLKTFFQQLR 151 >gi|154251101|ref|YP_001411925.1| zinc-binding CMP/dCMP deaminase [Parvibaculum lavamentivorans DS-1] gi|154155051|gb|ABS62268.1| CMP/dCMP deaminase zinc-binding [Parvibaculum lavamentivorans DS-1] Length = 164 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 75/130 (57%), Positives = 96/130 (73%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+PVGAV V ++++RAGNR ELKD TAHAE+LAIR C + E L DLYVT Sbjct: 34 RGEVPVGAVVVDGEGRVLARAGNRTLELKDPTAHAELLAIRAACAEIGSERLIGCDLYVT 93 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA AIS ARIRRLYYGA++ KGGG+++G + +T TCHH P++Y GI E+RS + Sbjct: 94 LEPCAMCATAISFARIRRLYYGAADEKGGGVDHGPRIFTQPTCHHRPDVYGGIGERRSAE 153 Query: 140 IIQDFFKERR 149 +++ FF RR Sbjct: 154 LLRSFFALRR 163 >gi|78066752|ref|YP_369521.1| tRNA-adenosine deaminase [Burkholderia sp. 383] gi|107028852|ref|YP_625947.1| CMP/dCMP deaminase, zinc-binding [Burkholderia cenocepacia AU 1054] gi|116689989|ref|YP_835612.1| CMP/dCMP deaminase, zinc-binding [Burkholderia cenocepacia HI2424] gi|170733328|ref|YP_001765275.1| CMP/dCMP deaminase zinc-binding [Burkholderia cenocepacia MC0-3] gi|77967497|gb|ABB08877.1| tRNA-adenosine deaminase [Burkholderia sp. 383] gi|105898016|gb|ABF80974.1| tRNA-adenosine deaminase [Burkholderia cenocepacia AU 1054] gi|116648078|gb|ABK08719.1| tRNA-adenosine deaminase [Burkholderia cenocepacia HI2424] gi|169816570|gb|ACA91153.1| CMP/dCMP deaminase zinc-binding [Burkholderia cenocepacia MC0-3] Length = 159 Score = 186 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 47/122 (38%), Positives = 68/122 (55%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I+R N D +AHAE+ A+RM + L +P +LYVTLEPC Sbjct: 17 VPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLEPC 76 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARI R+ YGA++PK G + + +H E+ G+ ++ Sbjct: 77 LMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAALKS 136 Query: 144 FF 145 FF Sbjct: 137 FF 138 >gi|290978118|ref|XP_002671783.1| predicted protein [Naegleria gruberi] gi|284085355|gb|EFC39039.1| predicted protein [Naegleria gruberi] Length = 214 Score = 186 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 23/169 (13%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ ++M AL AQ A E+PVG V V +NKI+ R N+ + K+ T HAE+ A Sbjct: 16 EQDEIYMREALNMAQKALEELEVPVGCVIVHDNKIVGRGYNKTNQKKNATRHAELEAFDE 75 Query: 62 GCRILSQE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 S+E E LYVT+EPC MCA+A+ L +I R+ G N + GG + Sbjct: 76 ITENYSEELNNNVNFFKECTLYVTVEPCVMCASALILLKIGRVVCGCMNERFGGCGSVLN 135 Query: 116 FY-----------------TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + + E G+ E+ +I+Q F+++ Sbjct: 136 IHQSCYNSLNHNHHHDQHGNNNQLNWKYECVHGLFEKECIEILQRFYEQ 184 >gi|182418731|ref|ZP_02950004.1| tRNA-specific adenosine deaminase [Clostridium butyricum 5521] gi|237669698|ref|ZP_04529675.1| tRNA-specific adenosine deaminase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377425|gb|EDT74981.1| tRNA-specific adenosine deaminase [Clostridium butyricum 5521] gi|237654772|gb|EEP52335.1| tRNA-specific adenosine deaminase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 149 Score = 186 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 73/143 (51%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A EA A + EIPVGAV V + II R N L DVTAHAEILAI+ L Sbjct: 3 FIDEAKAEAIKAYDKGEIPVGAVIVKDGVIIGRGHNLKETLNDVTAHAEILAIKEASNNL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L ++YVTLEPC MCA+AI +RI ++Y G N G + + Sbjct: 63 GDWRLDGAEMYVTLEPCPMCASAIVQSRISKVYIGTFNKDMGACGSVISLLDSRRLNSFV 122 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ + ++ + + FF+E R Sbjct: 123 DVKW-LYDKECSEFLVKFFEENR 144 >gi|302544137|ref|ZP_07296479.1| cytidine and deoxycytidylate deaminase [Streptomyces hygroscopicus ATCC 53653] gi|302461755|gb|EFL24848.1| cytidine and deoxycytidylate deaminase [Streptomyces himastatinicus ATCC 53653] Length = 166 Score = 186 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 51/140 (36%), Positives = 70/140 (50%), Gaps = 1/140 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALEEA A ++PVGAV + + ++ R N D TAHAE+LA+R R L Sbjct: 25 MRLALEEAVRAPETGDVPVGAVVLGPDGTVLGRGRNEREAHGDPTAHAEVLALRAAARRL 84 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPC MCA AI L+R+ R+ YGA + K G + + +H P Sbjct: 85 GGWRLTGCTLVVTLEPCAMCAGAIVLSRLDRVVYGAIDEKAGAVGSLWDIVRDRRLNHRP 144 Query: 127 EIYPGISEQRSRQIIQDFFK 146 E+ + + FF+ Sbjct: 145 EVIHDVLPDECAAPLTAFFR 164 >gi|260432946|ref|ZP_05786917.1| tRNA-specific adenosine deaminase [Silicibacter lacuscaerulensis ITI-1157] gi|260416774|gb|EEX10033.1| tRNA-specific adenosine deaminase [Silicibacter lacuscaerulensis ITI-1157] Length = 156 Score = 186 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 75/143 (52%), Positives = 100/143 (69%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE+A+ A R E+PVGAV V + +II+ GNR REL D TAHAEILA+R CR + Sbjct: 7 MDKALEQARAAGDRGEVPVGAVIVSPDGRIIAADGNRTRELHDPTAHAEILALRAACRAV 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPC MCAAA++ ARIRR+YYGA++PK GG+ +G + ++ HH P Sbjct: 67 GSERLTGHDLYVTLEPCAMCAAALAAARIRRIYYGAADPKSGGVAHGARVFSHPQAHHRP 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GI+ + +++DFF +R Sbjct: 127 EVYDGIAAEDCAWLLRDFFAAQR 149 >gi|289547972|ref|YP_003472960.1| CMP/dCMP deaminase zinc-binding protein [Thermocrinis albus DSM 14484] gi|289181589|gb|ADC88833.1| CMP/dCMP deaminase zinc-binding protein [Thermocrinis albus DSM 14484] Length = 156 Score = 186 bits (474), Expect = 9e-46, Method: Composition-based stats. Identities = 59/150 (39%), Positives = 81/150 (54%), Gaps = 2/150 (1%) Query: 1 MKK-GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 MK F+ L EA A + EIPVG V V +II+RA NR LKD TAHAEILAI Sbjct: 1 MKDSHEPFVKACLLEAHRAFRKGEIPVGCVVVKEGRIIARAHNRTIALKDPTAHAEILAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + L + L LYVTLEPC MCA A+ LAR+ ++ + A + K G + + Sbjct: 61 RKALKKLGESFLYGCTLYVTLEPCAMCAYALVLARVDKVIFLAQDEKLGAVMSLYNLLDE 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + + + ++++DFFK R Sbjct: 121 TAFNHRVRWEF-LPVEEAGRLLRDFFKNLR 149 >gi|298530999|ref|ZP_07018400.1| CMP/dCMP deaminase zinc-binding [Desulfonatronospira thiodismutans ASO3-1] gi|298509022|gb|EFI32927.1| CMP/dCMP deaminase zinc-binding [Desulfonatronospira thiodismutans ASO3-1] Length = 171 Score = 186 bits (474), Expect = 9e-46, Method: Composition-based stats. Identities = 56/150 (37%), Positives = 78/150 (52%), Gaps = 2/150 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAI 59 ++ V M AL+EA A R E+PVGAV +I++ NR EL D TAHAEI+A+ Sbjct: 20 EQWRVLMQEALKEAGKARSRGEVPVGAVLADAGTGEILAGGSNRCIELNDPTAHAEIIAL 79 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + LP L VTLEPC MC AI+ ARI L YG +P G + + Sbjct: 80 RRAGQARGNYRLPGTVLAVTLEPCLMCLGAIAQARIDGLVYGPRDPGAGALFSRPDILDF 139 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H I I + +++Q+FF+++R Sbjct: 140 VWLSHKFWIVENILKDECLELLQNFFRDKR 169 >gi|299138415|ref|ZP_07031594.1| CMP/dCMP deaminase zinc-binding [Acidobacterium sp. MP5ACTX8] gi|298599661|gb|EFI55820.1| CMP/dCMP deaminase zinc-binding [Acidobacterium sp. MP5ACTX8] Length = 182 Score = 186 bits (474), Expect = 9e-46, Method: Composition-based stats. Identities = 55/152 (36%), Positives = 74/152 (48%), Gaps = 5/152 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 FM A+ EA+ A E+PVGA+ V +I+SR N+ D TAHAEI+A+R Sbjct: 8 DDEAFMRLAIAEARAAEAAGEVPVGAIIVSPTGEIVSRGNNQVLRTNDPTAHAEIVALRA 67 Query: 62 GCRILSQEIL----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 L L LY TLEPC MCA AI ARI RL + A +PK G + Sbjct: 68 AGLALDNYRLLTPEGGCTLYCTLEPCAMCAGAILHARIARLVFAARDPKAGACGSVLSVM 127 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ I + ++ +FF+ RR Sbjct: 128 NHPALNHRVEVVESILTEECSAMLTNFFRARR 159 >gi|302535698|ref|ZP_07288040.1| cytidine/deoxycytidine deaminase [Streptomyces sp. C] gi|302444593|gb|EFL16409.1| cytidine/deoxycytidine deaminase [Streptomyces sp. C] Length = 163 Score = 186 bits (474), Expect = 9e-46, Method: Composition-based stats. Identities = 52/142 (36%), Positives = 73/142 (51%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALEEA A ++PVGAV + +++S N D TAHAE+LA+R L Sbjct: 22 MRLALEEAALAVPAGDVPVGAVVLGPGGELLSTGHNEREAAGDPTAHAELLALRRAAARL 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPC MCA A+ +R+ R+ YGA + K G + +H P Sbjct: 82 GEWRLTGCTLVVTLEPCVMCAGALVQSRVARVVYGAGDEKAGAAGSLWDLVRDRRLNHRP 141 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 E+ G+ EQ + + DFF+ Sbjct: 142 EVIRGVLEQECARQLTDFFRAL 163 >gi|284040230|ref|YP_003390160.1| CMP/dCMP deaminase zinc-binding protein [Spirosoma linguale DSM 74] gi|283819523|gb|ADB41361.1| CMP/dCMP deaminase zinc-binding protein [Spirosoma linguale DSM 74] Length = 144 Score = 186 bits (474), Expect = 9e-46, Method: Composition-based stats. Identities = 57/146 (39%), Positives = 82/146 (56%), Gaps = 5/146 (3%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + FM AL A+ AA EIPVGA+ V N+II++A N+ +LKDVTAHAEI+AI Sbjct: 3 DDYFMEIALTLAEEAADNGEIPVGAIVVCRNRIIAKARNQTEQLKDVTAHAEIMAITSAT 62 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L + LP+ +YVTLEPC MCA A+ A++ RL GA++ + G H Sbjct: 63 QYLGSKYLPDCTMYVTLEPCVMCAGALFWAQLGRLVIGAADARRG-----YSRVETNLLH 117 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 + G+ + S+ ++ FF R Sbjct: 118 PKTRVETGVLAEESQALLAKFFTRLR 143 >gi|114569170|ref|YP_755850.1| tRNA-adenosine deaminase [Maricaulis maris MCS10] gi|114339632|gb|ABI64912.1| tRNA-adenosine deaminase [Maricaulis maris MCS10] Length = 174 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 62/127 (48%), Positives = 81/127 (63%), Gaps = 2/127 (1%) Query: 25 PVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 P+GA+ V + I+++A NR D TAHAEILA+R L L ++LYVTLEP Sbjct: 35 PIGAIIVDPATDSIVAQAHNRPIADHDPTAHAEILALREAAAKLGNYRLTGLELYVTLEP 94 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCA AIS ARI RL +GAS+ KGG + +GT+F+ TCH PEI PGI +++ Sbjct: 95 CAMCAGAISHARIGRLVFGASDEKGGAVVSGTRFFEQPTCHWRPEIVPGILADEGAAMLK 154 Query: 143 DFFKERR 149 DFF+ RR Sbjct: 155 DFFRARR 161 >gi|241760863|ref|ZP_04758952.1| CMP/dCMP deaminase zinc-binding [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374482|gb|EER63943.1| CMP/dCMP deaminase zinc-binding [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 160 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 66/143 (46%), Positives = 95/143 (66%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRIL 66 M AL +A++AA + E+PVGAV KII+ AGN + D T HAE+ A+R +L Sbjct: 17 MRHALLQAESAAHQGEVPVGAVVTFKGKIIAVAGNAMQPPFIDPTGHAEVRALRQAASVL 76 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + DL+VTLEPC MCA AI+ ARIRRLYYGA +PKGG + +G + + +CHH P Sbjct: 77 GSSRLDQCDLWVTLEPCAMCAGAIATARIRRLYYGADDPKGGAVLSGVRLFFQPSCHHQP 136 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EIY + +++ ++++ FFK++R Sbjct: 137 EIYNDLGSRKASELLRQFFKQKR 159 >gi|225873364|ref|YP_002754823.1| cytidine and deoxycytidylate deaminase zinc-binding region [Acidobacterium capsulatum ATCC 51196] gi|225793789|gb|ACO33879.1| cytidine and deoxycytidylate deaminase zinc-binding region [Acidobacterium capsulatum ATCC 51196] Length = 164 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 57/147 (38%), Positives = 82/147 (55%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + ++M AL EA+ A E+PVGAVAV+ I++R NR D TAHAE++ +R Sbjct: 18 QTELWMQAALAEARAAEAAGEVPVGAVAVVEGSILARGQNRVLRDVDPTAHAEMVVLRAA 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L +LYVTLEPC MCA A+ AR+ RL YGAS+PK G + Sbjct: 78 AEAIGNYRLTGCELYVTLEPCAMCAGAMVHARLARLVYGASDPKAGAAGSVLAVVNHPQL 137 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ + ++++FF+ RR Sbjct: 138 NHQMEITGGVLAEECGTLLREFFRARR 164 >gi|256420111|ref|YP_003120764.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588] gi|256035019|gb|ACU58563.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588] Length = 146 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 56/153 (36%), Positives = 81/153 (52%), Gaps = 15/153 (9%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL EA+ A E+PVGA+ VL++KII + N+ L D TAHAE+LA+ Sbjct: 2 DDKYYMQQALREARKAFDAGEVPVGAIVVLSDKIIGKGSNQVEMLNDCTAHAEMLALTAA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK------GGGIENGTQF 116 L + L E LYVTLEPC MCA A+ ++I R+ Y A + K G Sbjct: 62 FNYLGSKYLMEATLYVTLEPCLMCAGALYWSKIGRIVYAAKDEKNSYRRVAGAT------ 115 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + H ++ G E+ S Q+++ FF++RR Sbjct: 116 ---SPFHPKTKVEQGPCEEESLQLVKTFFEQRR 145 >gi|254247929|ref|ZP_04941250.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Burkholderia cenocepacia PC184] gi|124872705|gb|EAY64421.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Burkholderia cenocepacia PC184] Length = 162 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 53/140 (37%), Positives = 75/140 (53%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A A+ A E+PVGAV V +++I+R N D +AHAE+ A+RM + Sbjct: 2 HFMRLAQAAAEEARAAGEVPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQH 61 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L +P +LYVTLEPC MCA AI ARI R+ YGA++PK G + + +H Sbjct: 62 LQNYRMPGCELYVTLEPCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHH 121 Query: 126 PEIYPGISEQRSRQIIQDFF 145 E+ G+ ++ FF Sbjct: 122 TEVTGGVLADECGAALKSFF 141 >gi|298293867|ref|YP_003695806.1| CMP/dCMP deaminase zinc-binding protein [Starkeya novella DSM 506] gi|296930378|gb|ADH91187.1| CMP/dCMP deaminase zinc-binding protein [Starkeya novella DSM 506] Length = 172 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 73/129 (56%), Positives = 94/129 (72%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 R E+PVGAV V ++ GNR REL D TAHAE++ IR +L + L E DLYVTL Sbjct: 39 RGEVPVGAVLVRGGTALAAEGNRMRELADPTAHAEMMVIRAAASVLGSDRLAECDLYVTL 98 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA AIS AR+RR+YYGA +PKGG +ENG +F++ ATCHH PE Y G+ E+ S ++ Sbjct: 99 EPCTMCAGAISFARLRRIYYGAPDPKGGAVENGVRFFSQATCHHRPEAYGGLGERESAEL 158 Query: 141 IQDFFKERR 149 +++FF ERR Sbjct: 159 LREFFAERR 167 >gi|302342017|ref|YP_003806546.1| CMP/dCMP deaminase zinc-binding protein [Desulfarculus baarsii DSM 2075] gi|301638630|gb|ADK83952.1| CMP/dCMP deaminase zinc-binding protein [Desulfarculus baarsii DSM 2075] Length = 171 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E P+GAV V ++++ GNR D TAHAE+L +R + L LYV+L Sbjct: 31 GETPIGAVLVDAAGRVLAAHGNRAISHTDPTAHAEMLVLRQAAAAMGNYRLVGSTLYVSL 90 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA AI AR+RR+ YGA++PK G + + +H P + G+ + S + Sbjct: 91 EPCPMCAGAIVWARVRRVVYGAADPKAGALGSALDLSRQPGLNHRPIVEGGLLAEESAAL 150 Query: 141 IQDFFKERR 149 +++FF+ RR Sbjct: 151 LREFFQSRR 159 >gi|262200019|ref|YP_003271228.1| CMP/dCMP deaminase zinc-binding protein [Haliangium ochraceum DSM 14365] gi|262083366|gb|ACY19335.1| CMP/dCMP deaminase zinc-binding protein [Haliangium ochraceum DSM 14365] Length = 147 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 52/131 (39%), Positives = 73/131 (55%), Gaps = 1/131 (0%) Query: 19 ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78 ++PVGAV V + +II+R NR + KD TAHAE+ A+R R L + LYV Sbjct: 12 GDAGDVPVGAVIVCDGEIIARGRNRRQLDKDPTAHAEVEALRSASRSLGNWRVEG-TLYV 70 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 T EPC MCA A+ AR++RL YG NPK G + + + A +H E+ G+S Q Sbjct: 71 TQEPCPMCAGALVNARVQRLVYGCPNPKAGSVHTLYRLVSDARLNHRIEVRGGVSAQACT 130 Query: 139 QIIQDFFKERR 149 +++ FF R Sbjct: 131 GLLKSFFAALR 141 >gi|313677068|ref|YP_004055064.1| cmp/dcmp deaminase zinc-binding protein [Marivirga tractuosa DSM 4126] gi|312943766|gb|ADR22956.1| CMP/dCMP deaminase zinc-binding protein [Marivirga tractuosa DSM 4126] Length = 152 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 79/148 (53%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL +A+ A EIPVGAV V KII++A N+ L DVTAHAE+LAI Sbjct: 6 NSDEHFMREALRQAEIAYEEGEIPVGAVVVCQKKIIAKAYNQTERLNDVTAHAEMLAITS 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L + LYV+LEPC MCA A++ ++I + Y ++ K G + Sbjct: 66 AANHLGGKYLTDCTLYVSLEPCGMCAGALNWSQISEIVYALADEKRGFTK-----INPNM 120 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ S+++I DFF + R Sbjct: 121 IHPKTKVKSGLMAAESKKLIDDFFAKMR 148 >gi|58581831|ref|YP_200847.1| hypothetical protein XOO2208 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623733|ref|YP_451105.1| hypothetical protein XOO_2076 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188576614|ref|YP_001913543.1| tRNA-specific adenosine deaminase [Xanthomonas oryzae pv. oryzae PXO99A] gi|58426425|gb|AAW75462.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367673|dbj|BAE68831.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188521066|gb|ACD59011.1| tRNA-specific adenosine deaminase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 170 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 74/148 (50%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNA-ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL A+ A +EIPVGA+ V ++ N N D +AHAEI+A+R Sbjct: 16 DVHWMQHALHLAECAERDHDEIPVGALIVGAEGNVLGEGWNFNIASHDPSAHAEIVAMRD 75 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R LS L LYVTLEPC MCA A+ ARI R+ + AS+PK G + Sbjct: 76 AGRRLSNHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 135 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + + ++F+ +R Sbjct: 136 HNHRVRVCGGVLAAEASLRLTNYFRAKR 163 >gi|259508111|ref|ZP_05751011.1| tRNA-specific adenosine deaminase [Corynebacterium efficiens YS-314] gi|259164334|gb|EEW48888.1| tRNA-specific adenosine deaminase [Corynebacterium efficiens YS-314] Length = 159 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 3/149 (2%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M ALE A+ ++PVGAV + +I++ A NR +D TAHAEI+A+R Sbjct: 12 QDERRMRHALEIARQ-TPPGDVPVGAVIYAPDGQILATATNRRETDRDPTAHAEIIALRC 70 Query: 62 GCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L VTLEPC+MCA A+ AR+ RL +GA P+ G + Sbjct: 71 AARRFTDGWRLTDCTLVVTLEPCSMCAGALVGARVGRLVFGAFEPRTGACGSVFDVVRDP 130 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ E+ +++ DFF +R Sbjct: 131 AVLHRAEVTGGVLEEDCAKLMTDFFSGQR 159 >gi|260773318|ref|ZP_05882234.1| tRNA-specific adenosine-34 deaminase [Vibrio metschnikovii CIP 69.14] gi|260612457|gb|EEX37660.1| tRNA-specific adenosine-34 deaminase [Vibrio metschnikovii CIP 69.14] Length = 165 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 49/126 (38%), Positives = 69/126 (54%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V + ++I+ NR+ D TAHAEI +R + L L + LYVTLEPC Sbjct: 17 VPVGAVLVKDGQVIAEGWNRSIGGHDATAHAEIQVLRQAGQALQNYRLLDTTLYVTLEPC 76 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA A+ +R+ R+ YGA + K G + +H I G+ E++ R +Q Sbjct: 77 PMCAGALLHSRVARIVYGAPDLKAGAAGTVLNLFASQAAYHYAVIEKGLLEEQCRTQLQA 136 Query: 144 FFKERR 149 FFK RR Sbjct: 137 FFKRRR 142 >gi|126727514|ref|ZP_01743348.1| cytidine and deoxycytidylate deaminase family protein [Rhodobacterales bacterium HTCC2150] gi|126703294|gb|EBA02393.1| cytidine and deoxycytidylate deaminase family protein [Rhodobacterales bacterium HTCC2150] Length = 143 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 74/143 (51%), Positives = 96/143 (67%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA+ A R E+PVGAV + + ++I++AGN R D AHAEILAIR C L Sbjct: 1 MDIALDEARAAGQRGEVPVGAVILSRDGQVIAQAGNETRAQNDPIAHAEILAIRAACSAL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 +E L DLYVTLEPC MCAAAI+ ARI R+YYGAS+PK GG+ G + + A HH P Sbjct: 61 GRERLQGFDLYVTLEPCAMCAAAIAAARIGRVYYGASDPKSGGVAQGARVFDHAQSHHKP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GIS + +++DFF +R Sbjct: 121 EVYDGISAKECENLLKDFFAAKR 143 >gi|56752247|ref|YP_172948.1| putative cytidine and deoxycytidylate deaminase [Synechococcus elongatus PCC 6301] gi|56687206|dbj|BAD80428.1| putative cytidine and deoxycytidylate deaminase [Synechococcus elongatus PCC 6301] Length = 168 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + +M+ A E+A A EIP+GAV V +++ NR +D HAEI+AIR Sbjct: 15 ETHHRWMTIAYEQAVIAGTAGEIPIGAVIVHQGHLLATGQNRRERDRDPCGHAEIIAIRA 74 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L + LYVTLEPC MCA AI AR+ +L Y A +PK G I + Sbjct: 75 AAARIGDWRLSDCHLYVTLEPCPMCAGAIIQARLGQLIYAADDPKAGAIRSLLNLPDSPV 134 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 HH + GI + Q+++D+F++RR Sbjct: 135 SHHHLSVLAGILAEPCGQLLRDWFQQRR 162 >gi|254430861|ref|ZP_05044564.1| tRNA-specific adenosine deaminase [Cyanobium sp. PCC 7001] gi|197625314|gb|EDY37873.1| tRNA-specific adenosine deaminase [Cyanobium sp. PCC 7001] Length = 206 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 48/144 (33%), Positives = 75/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M L AQ EIPV A V + + I NR +D HAE++A+R ++ Sbjct: 53 WMERLLRCAQRVGEDGEIPVAAAVLDQHGRCIGWGCNRRERQQDPLGHAELVALRQASQL 112 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L L VTLEPC MCA A+ ARI L YGA +PK G + + + HH Sbjct: 113 LGDWRLNSCTLLVTLEPCPMCAGALVQARIGTLVYGAPDPKRGAVGSCLDLVRHPSAHHH 172 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G++ +++ ++++ +F++RR Sbjct: 173 MRVVGGLAGEQAGELLKAWFRQRR 196 >gi|319763286|ref|YP_004127223.1| cmp/dcmp deaminase zinc-binding protein [Alicycliphilus denitrificans BC] gi|317117847|gb|ADV00336.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus denitrificans BC] Length = 358 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 50/144 (34%), Positives = 72/144 (50%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M AL +A+ A E+PVGAV V ++I+ N D TAHAEI A+R Sbjct: 5 EDDATWMREALAQARAALQDGEVPVGAVLVRGGEVIATGRNAPIAGHDPTAHAEIAALRA 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L LYVTLEPC MCA A+ AR+ R+ YGA++PK G + + Sbjct: 65 AAARLGNYRLDGCTLYVTLEPCAMCAGAMLHARLPRVVYGAADPKTGAAGSVVDLFAEPR 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 +H + G+ + ++ FF Sbjct: 125 LNHQTRVAGGVLAEECGALLSGFF 148 >gi|25026753|ref|NP_736807.1| hypothetical protein CE0197 [Corynebacterium efficiens YS-314] gi|23492032|dbj|BAC17007.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 160 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 3/149 (2%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M ALE A+ ++PVGAV + +I++ A NR +D TAHAEI+A+R Sbjct: 13 QDERRMRHALEIARQ-TPPGDVPVGAVIYAPDGQILATATNRRETDRDPTAHAEIIALRC 71 Query: 62 GCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + L + L VTLEPC+MCA A+ AR+ RL +GA P+ G + Sbjct: 72 AARRFTDGWRLTDCTLVVTLEPCSMCAGALVGARVGRLVFGAFEPRTGACGSVFDVVRDP 131 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ E+ +++ DFF +R Sbjct: 132 AVLHRAEVTGGVLEEDCAKLMTDFFSGQR 160 >gi|152112359|sp|Q4UJW9|Y1319_RICFE RecName: Full=Uncharacterized deaminase RF_1319 Length = 144 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 65/144 (45%), Positives = 95/144 (65%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL++A A +NE+PVGAV V N KII + N E + HAEI+AI C + Sbjct: 1 MEQALKQAGIAFDKNEVPVGAVIVDRLNQKIIVSSHNNTEEKNNALYHAEIIAINEACNL 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 +S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+ +++ + C + Sbjct: 61 ISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSSVCFYR 120 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PEIY GI + SR ++++FFK R Sbjct: 121 PEIYSGILAEDSRLLMKEFFKRIR 144 >gi|330825481|ref|YP_004388784.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus denitrificans K601] gi|329310853|gb|AEB85268.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus denitrificans K601] Length = 358 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 50/144 (34%), Positives = 72/144 (50%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M AL +A+ A E+PVGAV V ++I+ N D TAHAEI A+R Sbjct: 5 EDDATWMRAALAQARAALQDGEVPVGAVLVRGGEVIATGRNAPIAGHDPTAHAEIAALRA 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L LYVTLEPC MCA A+ AR+ R+ YGA++PK G + + Sbjct: 65 AAARLGNYRLDGCTLYVTLEPCAMCAGAMLHARLPRVVYGAADPKTGAAGSVVDLFAEPR 124 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 +H + G+ + ++ FF Sbjct: 125 LNHQTRVAGGVLAEECGALLSGFF 148 >gi|329570031|gb|EGG51786.1| cytidine and deoxycytidylate deaminase zinc-binding region [Enterococcus faecalis TX1467] Length = 144 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 50/127 (39%), Positives = 71/127 (55%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 E+P+GAV V +II R N ++ TAHAE+ AI+ CR + L E L+VTLEP Sbjct: 3 EVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACRGIENWRLEETQLFVTLEP 62 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MC+ A+ LARI +YYGA++PK G +H + G+ E+ R ++ Sbjct: 63 CPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVAYVEAGVLEEECRLLLV 122 Query: 143 DFFKERR 149 FFK+ R Sbjct: 123 QFFKKLR 129 >gi|227486589|ref|ZP_03916905.1| nucleoside deaminase [Anaerococcus lactolyticus ATCC 51172] gi|227235407|gb|EEI85422.1| nucleoside deaminase [Anaerococcus lactolyticus ATCC 51172] Length = 158 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 1/148 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM+ A+ EA+ A +E+P+GAV V ++I+ R N + K HAEI A++ Sbjct: 7 KADKFFMTEAINEAKLAKSIDEVPIGAVVVCGDRIVGRGHNFTYKGKSALNHAEIYALKE 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + L E +YVTLEPC MCA AI +R++RL +PK GG Sbjct: 67 AGKNIGDFRLEECTMYVTLEPCLMCAGAIMHSRVKRLVIACKDPKRGGFSTSFIDKDSPH 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + PEI G+ E+ S + +Q FF+ R Sbjct: 127 LN-VPEISYGLMEEESLKELQSFFRALR 153 >gi|323525792|ref|YP_004227945.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1001] gi|323382794|gb|ADX54885.1| CMP/dCMP deaminase zinc-binding protein protein [Burkholderia sp. CCGE1001] Length = 227 Score = 185 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 46/122 (37%), Positives = 69/122 (56%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I++ N D +AHAE++A+R +I+ LP +LYVTLEPC Sbjct: 72 VPVGAVLVRGDEVIAKGFNHPIGAHDPSAHAEMIALRTAAQIVENYRLPGCELYVTLEPC 131 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARI R+ +GA +PK G + + +H E+ G+ E ++ Sbjct: 132 LMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQLNHHTEVVGGVLESECGAALKS 191 Query: 144 FF 145 FF Sbjct: 192 FF 193 >gi|325846128|ref|ZP_08169222.1| cytidine and deoxycytidylate deaminase zinc-binding region [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481721|gb|EGC84756.1| cytidine and deoxycytidylate deaminase zinc-binding region [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 185 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 51/143 (35%), Positives = 76/143 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A+ EA+ A L E+P+G V V N KII+R+ N + K HAEILAI Sbjct: 2 DDYFYMKEAINEAKLARLEEEVPIGCVIVKNGKIIARSHNYTYKGKSALKHAEILAIDKA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + L + +YVT+EPC+MCA AI +RI RL ++ K G + T + Sbjct: 62 SKYVGDFRLEDCTMYVTMEPCSMCAGAIINSRIDRLVIALADVKRGACGSNTNITGDRSQ 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 H + G+ + +S +I+Q FF Sbjct: 122 LHFLDAEFGLMKDQSLEILQSFF 144 >gi|119714544|ref|YP_921509.1| tRNA-adenosine deaminase [Nocardioides sp. JS614] gi|119535205|gb|ABL79822.1| tRNA-adenosine deaminase [Nocardioides sp. JS614] Length = 143 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA+ A ++P+GAV + + ++R N D T HAE++A+R R Sbjct: 1 MRTALDEARAALASGDVPIGAVVLDPDGTPVARGRNVREADHDPTGHAEVVALRAAARAR 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPCTMCA A L+R+ R+ +GA +PK G + + +H P Sbjct: 61 GEWRLEGHTLVVTLEPCTMCAGAAVLSRVERIVFGAWDPKAGAVGSLWDVVRDRRLNHRP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ + S +++DFF +R Sbjct: 121 EVISGVLAEESAGLLEDFFLTQR 143 >gi|315924779|ref|ZP_07920996.1| tRNA-specific adenosine deaminase [Pseudoramibacter alactolyticus ATCC 23263] gi|315621678|gb|EFV01642.1| tRNA-specific adenosine deaminase [Pseudoramibacter alactolyticus ATCC 23263] Length = 164 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 52/142 (36%), Positives = 76/142 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL+E + A E PVGAV V ++++ NR L+D TAHAE+L IR + L Sbjct: 19 WMRLALDEGRQALAAGEFPVGAVVVCGGQVVAADHNRKETLQDPTAHAELLVIRAAAQRL 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVT EPC MC A+ AR+ +L YGA+ + G +E ++ Sbjct: 79 GRWRLDDCTLYVTAEPCPMCMGAVIQARLAKLVYGAAEKRFGAVETTADLGRHPMLANAM 138 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 EIY GI E ++++ F R Sbjct: 139 EIYAGICENDCIELMKQCFYNR 160 >gi|189350770|ref|YP_001946398.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia multivorans ATCC 17616] gi|189334792|dbj|BAG43862.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia multivorans ATCC 17616] Length = 159 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 47/126 (37%), Positives = 70/126 (55%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++++R N D +AHAE+ A+RM + L +P +LYVTLE Sbjct: 15 GEVPVGAVLVRGDEVLARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLE 74 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI ARI R+ +GA++PK G + + +H E+ G+ + Sbjct: 75 PCLMCAGAIMHARIARVVFGAADPKTGVCGSVMDAFANPQLNHHTEVVGGVLAHECGAAL 134 Query: 142 QDFFKE 147 + FF E Sbjct: 135 KSFFAE 140 >gi|187776528|ref|ZP_02993001.1| hypothetical protein CLOSPO_00031 [Clostridium sporogenes ATCC 15579] gi|187775187|gb|EDU38989.1| hypothetical protein CLOSPO_00031 [Clostridium sporogenes ATCC 15579] Length = 148 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 58/145 (40%), Positives = 81/145 (55%), Gaps = 1/145 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N ++ A+ EA+ A E+PVGAV V NKII+++ N ELKD TAHAE+LAI+ C+ Sbjct: 2 NSYIEYAIIEAKKALAIGEVPVGAVIVKENKIIAKSHNLKEELKDPTAHAEVLAIKKACK 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 IL L +YVTLEPC MCA+AI +RI L+ G +P GG + + Sbjct: 62 ILGNWRLKGCKMYVTLEPCAMCASAIIQSRISELHIGTFDPVGGACGSVVNITNNSYLKS 121 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + I + +II +FF+ R Sbjct: 122 NLTIKW-LYNDECSKIITNFFQNIR 145 >gi|269792349|ref|YP_003317253.1| CMP/dCMP deaminase zinc-binding protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099984|gb|ACZ18971.1| CMP/dCMP deaminase zinc-binding protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 153 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 50/143 (34%), Positives = 70/143 (48%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL EA+ A ++PVGAV V+N ++ R N D HAE++AIR C L Sbjct: 3 FMREALREAELAMEAGDVPVGAVVVMNGLVVGRGRNVRELTGDPLGHAEMVAIRDACSAL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVTLEPC MCA AI RI +++ +PK G + + Sbjct: 63 GTWRLDGASLYVTLEPCVMCAGAILQCRISEVHFALRDPKAGAVGSLYDVLRDPRQPFRC 122 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G RS +++ FF+ R Sbjct: 123 RVHQGEMRDRSAALLRGFFEGLR 145 >gi|313891940|ref|ZP_07825541.1| cytidine and deoxycytidylate deaminase zinc-binding region [Dialister microaerophilus UPII 345-E] gi|313119583|gb|EFR42774.1| cytidine and deoxycytidylate deaminase zinc-binding region [Dialister microaerophilus UPII 345-E] Length = 149 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 88/147 (59%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ A++EA+ A + NE+P+GA+ + II+ + N + K++ HAEILAI+ Sbjct: 2 NDKDYMTLAIQEAKKAYMNNEMPIGAIITYKDIIIANSYNECEKNKNIFDHAEILAIKKA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++L+ L LYVT+EPC MCA AI +RI RL +GA N GGI + + ++ Sbjct: 62 SKLLNTSRLTGCTLYVTIEPCPMCAGAIMHSRIDRLVFGAFNNLYGGIISKYKIGKDSSM 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ + GI E +Q++ DFFK +R Sbjct: 122 NHTLSVVSGIEENTCKQLVCDFFKNKR 148 >gi|297627118|ref|YP_003688881.1| CMP/dCMP deaminase, zinc-binding [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922883|emb|CBL57463.1| CMP/dCMP deaminase, zinc-binding [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 159 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 54/128 (42%), Positives = 72/128 (56%), Gaps = 1/128 (0%) Query: 23 EIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 ++PVGAV + N ++ GNR + D TAHAE+LAIR C L + L VTLE Sbjct: 32 DVPVGAVVLDGNGVLLGEGGNRREQDGDATAHAEVLAIRAACARRGAWRLDDCTLVVTLE 91 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PCTMCA A+ ARIRRL +GA +PK G I + +H E+ GI ++++ Sbjct: 92 PCTMCAGALVNARIRRLVFGAFDPKAGAIASLWDVVRDPRLNHRVEVVGGIMADDCQRVL 151 Query: 142 QDFFKERR 149 DFF RR Sbjct: 152 TDFFATRR 159 >gi|313887628|ref|ZP_07821310.1| cytidine and deoxycytidylate deaminase zinc-binding region [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846237|gb|EFR33616.1| cytidine and deoxycytidylate deaminase zinc-binding region [Peptoniphilus harei ACS-146-V-Sch2b] Length = 150 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 60/144 (41%), Positives = 82/144 (56%), Gaps = 1/144 (0%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL + + L +++P+G V V NNKII N+ +LK+ TAHAEI+AI M R Sbjct: 4 KFMKEALRYGRRSLLSDDVPIGCVVVKNNKIIGYGYNKKEDLKNPTAHAEIMAISMAARH 63 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L+ L D+YVTLEPC MC AI ARI+ LY+GA N + G + + + L T +H Sbjct: 64 LNSYHLEGCDIYVTLEPCLMCVGAILNARIKNLYFGARNKRFGAVVSHQKIEKLIT-NHR 122 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 GI E+ +I FF + R Sbjct: 123 INYEYGILERECASLITGFFSDLR 146 >gi|325479006|gb|EGC82107.1| cytidine and deoxycytidylate deaminase zinc-binding region [Anaerococcus prevotii ACS-065-V-Col13] Length = 169 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 75/148 (50%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM A+ EA+ A E+PVGAV V +II R N + K HAEI+AI+ Sbjct: 14 KMDMFFMQEAISEARLARFVEEVPVGAVIVYKGEIIGRGHNYTYKGKSALKHAEIMAIKE 73 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L E +YVT+EPC+MCA AI +RI RL G +PK G + T + Sbjct: 74 ASEYMDDFRLEECTMYVTMEPCSMCAGAIINSRIDRLVIGIRDPKRGACGSNTNVTGDRS 133 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+SE+ IQ FF+ R Sbjct: 134 QLHYLDAEFGLSEEECLYEIQTFFRYLR 161 >gi|238026935|ref|YP_002911166.1| CMP/dCMP deaminase, zinc-binding [Burkholderia glumae BGR1] gi|237876129|gb|ACR28462.1| CMP/dCMP deaminase, zinc-binding [Burkholderia glumae BGR1] Length = 202 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 50/140 (35%), Positives = 71/140 (50%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL A A E+PVGAV V +++I+R N D +AHAE+ A+R Sbjct: 30 ERDRRFMRLALAAADAARAAGEVPVGAVLVRGDQVIARGFNHPISGHDPSAHAEMAALRE 89 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L LP +LYVTLEPC MC+ AI ARI R+ YGA++PK G + + Sbjct: 90 AAHTLGNYRLPGCELYVTLEPCLMCSGAIMHARIARVVYGAADPKTGACGSVVDAFANPQ 149 Query: 122 CHHSPEIYPGISEQRSRQII 141 +H + G+ + Sbjct: 150 LNHHTSVTGGVLADECGHTL 169 >gi|116250665|ref|YP_766503.1| nitrogen fixation symbiosis related protein [Rhizobium leguminosarum bv. viciae 3841] gi|115255313|emb|CAK06388.1| putative nitrogen fixation symbiosis related protein [Rhizobium leguminosarum bv. viciae 3841] Length = 151 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 91/147 (61%), Positives = 112/147 (76%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K N FM ALEEA+ A R E+P+GAV V+++ +SR+GNR RELKDVTAHAEI AIR+ Sbjct: 2 KTNRFMEMALEEARAAGERGEVPIGAVVVVDDIAVSRSGNRTRELKDVTAHAEIAAIRLA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C L QE L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FY TC Sbjct: 62 CEALGQERLVGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYGQPTC 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 HH+PE+Y G +E +S +++ FF +RR Sbjct: 122 HHAPEVYSGFNEVQSADLLRKFFSQRR 148 >gi|52841949|ref|YP_095748.1| deaminase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629060|gb|AAU27801.1| deaminase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 141 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 73/143 (51%), Gaps = 3/143 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A E+A A E+PVGAV V +N+++ N + D + HAEI AIR R L Sbjct: 1 MQLAYEQAVIARNEGEVPVGAVLVSKDNQLLGVGRNVIEKSHDPSDHAEIRAIRQASRKL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + LYVTLEPC MCA + ARI+RL + + K G + +HS Sbjct: 61 NNHRLLDTTLYVTLEPCVMCAGLMVHARIKRLVFATRDFKTGAAGSMFNVL--HALNHSV 118 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI + Q++ DFF+ R Sbjct: 119 LIDEGIMQAECSQLLSDFFRNLR 141 >gi|13476818|ref|NP_108387.1| nitrogen fixation protein gene [Mesorhizobium loti MAFF303099] gi|14027579|dbj|BAB53848.1| nitrogen fixation protein gene [Mesorhizobium loti MAFF303099] Length = 149 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 74/129 (57%), Positives = 94/129 (72%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 R E+PVGAV + ++++AGNR REL D TAHAE+L IR C LS E L DLYVTL Sbjct: 20 RGEVPVGAVIANGSTVVAKAGNRTRELADPTAHAEMLVIREACGKLSSERLTGHDLYVTL 79 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA AIS AR+RRLY+GA + KGG + NG +F+ TCHH+P+IYPG+ E + + Sbjct: 80 EPCAMCAGAISFARLRRLYFGAPDEKGGAVVNGVRFFASPTCHHTPDIYPGMGETEAALL 139 Query: 141 IQDFFKERR 149 ++DFFKERR Sbjct: 140 LKDFFKERR 148 >gi|303232398|ref|ZP_07319090.1| cytidine and deoxycytidylate deaminase zinc-binding region [Atopobium vaginae PB189-T1-4] gi|302481482|gb|EFL44550.1| cytidine and deoxycytidylate deaminase zinc-binding region [Atopobium vaginae PB189-T1-4] Length = 164 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL EA+ AA NE+P+GAV V N II+RA N E + HAE LA++ Sbjct: 16 EADEAFMRAALAEARAAAAENEVPIGAVVVYNGAIIARAHNTREESTNPAGHAEFLAMQH 75 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L +YVTLEPC MCA + ARI R Y AS+PK G + Sbjct: 76 AAETLQRWRLFGCTVYVTLEPCLMCAGLMLNARIDRCVYAASDPKAGAVGTLYNVSNDFR 135 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + + +++QDFF+ RR Sbjct: 136 LNHKFMVTTGVLQGEAVELLQDFFRHRR 163 >gi|121714253|ref|XP_001274737.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein [Aspergillus clavatus NRRL 1] gi|119402891|gb|EAW13311.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein [Aspergillus clavatus NRRL 1] Length = 191 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 43/145 (29%), Positives = 73/145 (50%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL + A E PVG V V + ++I N + + T HAE +AI Sbjct: 17 THAYFMKQALLMGEKALEIGETPVGCVLVRDGQLIGSGMNDTNKSMNGTRHAEFIAIEEM 76 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R + +L DLYVT+EPC MCA+A+ +IR +Y+G +N + GG + ++ T Sbjct: 77 LRSHPRSLLRSTDLYVTVEPCVMCASALRQYQIRSVYFGCANERFGGTGSILSLHSDPTL 136 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKE 147 ++ G+ + + +++ F+ + Sbjct: 137 DPPYPVHGGLFREEAIMLLRRFYIQ 161 >gi|239989276|ref|ZP_04709940.1| putative deaminase [Streptomyces roseosporus NRRL 11379] Length = 174 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PVGAV + + ++ N D TAHAEILA+R + + L + L VTL Sbjct: 47 GDVPVGAVVLGPDGTELATGHNEREATGDPTAHAEILALRRAAEAVGEWRLTDCTLVVTL 106 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ +R+ R+ YGA + K G + +H PE+ G+ E+ + Sbjct: 107 EPCTMCAGALVQSRVARVVYGARDEKAGAAGSLWDVIRDRRLNHRPEVIAGVLERECAEQ 166 Query: 141 IQDFFK 146 + FF+ Sbjct: 167 LTAFFR 172 >gi|330470612|ref|YP_004408355.1| CMP/dCMP deaminase [Verrucosispora maris AB-18-032] gi|328813583|gb|AEB47755.1| CMP/dCMP deaminase [Verrucosispora maris AB-18-032] Length = 200 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 8/153 (5%) Query: 2 KKGNVFMSCALEEAQNA-------ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAH 53 ++ ++M ALE A +++PVGAV + ++ N D TAH Sbjct: 48 QRHELWMRRALEVAVTGPAVADPSGQADDVPVGAVLYGPDGDELAIGRNERELTGDPTAH 107 Query: 54 AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 AE+LA+R G L + L L VTLEPCTMCA A+ L+R+ + +GA PK G + Sbjct: 108 AEVLALRRGAERLGRWRLDGCILVVTLEPCTMCAGALVLSRVSTVVFGAWEPKTGAAGSL 167 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 +H PE+Y G+ + +++ FF+ Sbjct: 168 WDVLRDRRLNHRPEVYGGVLATETGTVMRAFFR 200 >gi|296819611|ref|XP_002849875.1| tRNA specific adenosine deaminase [Arthroderma otae CBS 113480] gi|238840328|gb|EEQ29990.1| tRNA specific adenosine deaminase [Arthroderma otae CBS 113480] Length = 190 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 50/144 (34%), Positives = 74/144 (51%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K VFM AL+ A+ A E PVG V V ++I N + + T HAE LAI Sbjct: 9 SKHEVFMKMALKMAETALAAGETPVGCVLVNKGRVIGSGMNDTNKSLNGTRHAEFLAIEE 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + I E DLYVT+EPC MCA+A+ RIR +Y+G +N + GG ++ + Sbjct: 69 ALRSHPRSIFRETDLYVTVEPCIMCASALRQYRIRSVYFGCANERFGGTGGVLTLHSDSA 128 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 +Y GI + + +++ F+ Sbjct: 129 IDPPYPVYGGIFRKEAIMLLRQFY 152 >gi|229496208|ref|ZP_04389928.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas endodontalis ATCC 35406] gi|229316786|gb|EEN82699.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas endodontalis ATCC 35406] Length = 151 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 74/148 (50%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M AL+EA A E+P+GAV V +I+ R NR +L+D TAHAEILAI Sbjct: 9 TEDERAMRAALDEAYLAKEAGEVPIGAVVVYQGRIVGRGRNRVEQLQDPTAHAEILAITA 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L + LYV+LEPC MC A+ A++ R+ Y S+PK G Sbjct: 69 ATENLGAKYLTDCTLYVSLEPCVMCMGALRWAQVSRIVYATSDPKAG-----YHVLAPKA 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H I G + +++ FF ERR Sbjct: 124 PHPRAVIEVGPFGDEAAGLLRSFFSERR 151 >gi|206901944|ref|YP_002250953.1| tRNA-specific adenosine deaminase [Dictyoglomus thermophilum H-6-12] gi|206741047|gb|ACI20105.1| tRNA-specific adenosine deaminase [Dictyoglomus thermophilum H-6-12] Length = 156 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 75/147 (51%), Gaps = 4/147 (2%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + FM A++EA+ A + E+PVGAV V N KII R N K HAEI+AI Sbjct: 9 DSFFMHEAIKEAEKALKKGEVPVGAVVVFNEKIIGRGYNLRETKKSPILHAEIIAIEKAV 68 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG-TQFYTLATC 122 + ++ L LYVTLEPC MC AI +RI RL YG N + G + Y Sbjct: 69 KKINDWRLYNCTLYVTLEPCIMCFGAILNSRIDRLVYGTENLEEGFTKFLNVDNYRKWQL 128 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 EI G+ + + ++++FFK R Sbjct: 129 R---EIISGVEKDKCEALLKEFFKNVR 152 >gi|90021123|ref|YP_526950.1| tRNA-adenosine deaminase [Saccharophagus degradans 2-40] gi|89950723|gb|ABD80738.1| tRNA-adenosine deaminase [Saccharophagus degradans 2-40] Length = 176 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 60/146 (41%), Positives = 81/146 (55%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL+ A+ AA +E+PVGAV V +NKI+ N D TAHAEI A+R Sbjct: 8 DEHWMREALKLAELAAAEHEVPVGAVVVRDNKILGSGFNTPISGCDPTAHAEITALRQAA 67 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + LP+ LYVT+EPCTMC AI AR+ R+ YGA+ PK G I + + + Sbjct: 68 KNEHNYRLPDATLYVTIEPCTMCLGAIMHARVARVVYGATEPKAGVIYSNPVWQQGGFFN 127 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E G+ + +IQ FFK+RR Sbjct: 128 HQVEWCGGVLANEATALIQQFFKQRR 153 >gi|317132506|ref|YP_004091820.1| CMP/dCMP deaminase zinc-binding protein [Ethanoligenens harbinense YUAN-3] gi|315470485|gb|ADU27089.1| CMP/dCMP deaminase zinc-binding protein [Ethanoligenens harbinense YUAN-3] Length = 160 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 54/146 (36%), Positives = 77/146 (52%), Gaps = 1/146 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ALE+A+ A E+P+GAV V + ++ NR + AHAE AIR C Sbjct: 9 HETWMRLALEQAERAGREGEVPIGAVIVKDGAALAVGRNRRETDHNALAHAEAEAIRAAC 68 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L L LYVTLEPC MCA AI AR+ + +GA +PK G + ++ + Sbjct: 69 AALGSWRLSGCTLYVTLEPCPMCAGAIINARVDTVVFGAYDPKAGASGSVIDLFSCP-FN 127 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H P + G+ E+ R+++QDFF R Sbjct: 128 HHPAVMGGVLEEDCRRLLQDFFAGLR 153 >gi|154496071|ref|ZP_02034767.1| hypothetical protein BACCAP_00355 [Bacteroides capillosus ATCC 29799] gi|150274626|gb|EDN01690.1| hypothetical protein BACCAP_00355 [Bacteroides capillosus ATCC 29799] Length = 256 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 1/147 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL+ A+ A E+PVG V V +++ R NR E KD AHAE++AI Sbjct: 2 DHEGYMRQALDLAREAMEAGEVPVGCVVVWEGRVVGRGRNRREENKDALAHAELMAIHEA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + DLYVTLEPC MCA I ARI R++YGA + + G + ++ Sbjct: 62 NQTLGGWRLHKADLYVTLEPCAMCAGGIVNARIPRVWYGAEDTRFGACGSALDVFSAP-L 120 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P++ GI + S ++Q FF+ R Sbjct: 121 NHRPQVTGGILAEESLALMQQFFQRLR 147 >gi|297568295|ref|YP_003689639.1| CMP/dCMP deaminase zinc-binding protein [Desulfurivibrio alkaliphilus AHT2] gi|296924210|gb|ADH85020.1| CMP/dCMP deaminase zinc-binding protein [Desulfurivibrio alkaliphilus AHT2] Length = 161 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K M ALE A+ AA R E+PVGA+ + +I++ GNR D + HAEI+ +R Sbjct: 13 KDTSLMHQALEAARAAAARGEVPVGALLIDRQGEILAVDGNRTIGDHDPSGHAEIVVLRR 72 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LYVTLEPC MC + ARI RL +GA++PK G + + + Sbjct: 73 AAARIGNHRLTGTTLYVTLEPCLMCVGVMIQARIERLVFGANDPKAGAVVSLYRLAADPR 132 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + + Q+++DFF+ RR Sbjct: 133 LNHRLQVTAGVLARDAGQLLRDFFRARR 160 >gi|21222441|ref|NP_628220.1| deaminase [Streptomyces coelicolor A3(2)] gi|289770376|ref|ZP_06529754.1| deaminase [Streptomyces lividans TK24] gi|13122131|emb|CAC32309.1| putative deaminase [Streptomyces coelicolor A3(2)] gi|289700575|gb|EFD68004.1| deaminase [Streptomyces lividans TK24] Length = 143 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 2/128 (1%) Query: 23 EIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PVGAV + + ++S N D TAHAE+LAIR L + L L VTL Sbjct: 16 DVPVGAVVLAPDGRTVLSAGHNEREATGDPTAHAEVLAIRRAAGELGEWRLSGCTLVVTL 75 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ +R+ R+ YGA + K G + +H PE+ G+ ++ Sbjct: 76 EPCTMCAGALVQSRVDRVVYGARDDKAGAAGSLWDVVRDRRLNHRPEVIEGVLADDCARL 135 Query: 141 IQDFFKER 148 + DFF++R Sbjct: 136 LTDFFRDR 143 >gi|198274233|ref|ZP_03206765.1| hypothetical protein BACPLE_00373 [Bacteroides plebeius DSM 17135] gi|198272908|gb|EDY97177.1| hypothetical protein BACPLE_00373 [Bacteroides plebeius DSM 17135] Length = 144 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 5/149 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M AL EA AA R E+PVGAV V ++I++RA N L DVTAHAE+ A+ Sbjct: 1 MADDSFYMKQALAEAARAAERGEVPVGAVVVCRDRILARAHNLTETLHDVTAHAEMQALT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L + LYVT+EPC MCA AI+ +++ RL +GA + K G Q Y Sbjct: 61 AAANSLGAKYLTDCTLYVTVEPCVMCAGAIAWSQVGRLVFGAEDEKRG-----YQRYAPQ 115 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ +++DFF++RR Sbjct: 116 ALHPKTVVVKGVLADECAGLMKDFFRKRR 144 >gi|331005351|ref|ZP_08328736.1| tRNA-specific adenosine-34 deaminase [gamma proteobacterium IMCC1989] gi|330420848|gb|EGG95129.1| tRNA-specific adenosine-34 deaminase [gamma proteobacterium IMCC1989] Length = 158 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 66/148 (44%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +M AL AQ AA +EIPVGAV V +N+II N+ L D TAHAEI A+R Sbjct: 4 KDDCYWMQQALLLAQQAAGMDEIPVGAVVVKDNEIIGSGFNQPISLCDPTAHAEIQALRN 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LYVTLEPC MCA AI +RI RL YGA+ PK G I + TQ A Sbjct: 64 AANHIGNYRLNSATLYVTLEPCGMCAGAIVHSRIARLVYGATEPKAGVIVSQTQQLDKAY 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H G+ + +II FF RR Sbjct: 124 LNHKVLYQGGVCAEECSEIISVFFSRRR 151 >gi|281202068|gb|EFA76273.1| adenosine deaminase [Polysphondylium pallidum PN500] Length = 213 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 8/153 (5%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++K + FM AL EA+ A E+PVG V V N+ +I+ N+ K+ T HAEI A+ Sbjct: 25 IEKHSKFMKLALNEAKKALDEGEVPVGCVIVHNDIVIAAGSNKTNIKKNATRHAEIEALD 84 Query: 61 ------MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + ++L + LYVT+EPC MCAA + LA+I +Y+G N K GG + Sbjct: 85 SIYLSENASKFGGDKLLSDCKLYVTVEPCIMCAAVLQLAKINIVYFGCYNDKFGGNGSIL 144 Query: 115 QFYTLATC--HHSPEIYPGISEQRSRQIIQDFF 145 +++ H G+ + ++ ++Q F+ Sbjct: 145 PVHSIDCFERGHPYNCVSGVMKDQAIHLLQKFY 177 >gi|85705168|ref|ZP_01036268.1| hypothetical protein ROS217_04635 [Roseovarius sp. 217] gi|85670490|gb|EAQ25351.1| hypothetical protein ROS217_04635 [Roseovarius sp. 217] Length = 147 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 81/143 (56%), Positives = 102/143 (71%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA+ AALR E+PVGAV V + + ++RAGNR REL D TAHAEILAIR C L Sbjct: 1 METALDEARAAALRGEVPVGAVIVAPSGVLVARAGNRTRELSDPTAHAEILAIRAACAAL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPC MCA+AI+ ARI RLYYGA++PK GG+ G + ++ CHH P Sbjct: 61 GSERLTGHDLYVTLEPCAMCASAIASARIARLYYGAADPKSGGVAMGARVFSHPQCHHVP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EIY GI+ S +++ FF++RR Sbjct: 121 EIYDGIAATESETLLKTFFRDRR 143 >gi|51473999|ref|YP_067756.1| cytosine aminohydrolase [Rickettsia typhi str. Wilmington] gi|81610850|sp|Q68Y02|Y819_RICTY RecName: Full=Uncharacterized deaminase RT0819 gi|51460311|gb|AAU04274.1| Cytosine aminohydrolase [Rickettsia typhi str. Wilmington] Length = 148 Score = 183 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 64/144 (44%), Positives = 96/144 (66%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL++A+ A +NE+PVG V V N KII + N E + HAEI+AI C + Sbjct: 1 MEQALKQARLAFDKNEVPVGVVIVYRLNQKIIVSSHNNIEEKNNALCHAEIIAINEACNL 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 +S + L + D+YVTLEPC MCA+AIS +R++RL+YGAS+ K G +E+ +++ + C H Sbjct: 61 ISSKNLNDYDIYVTLEPCAMCASAISHSRLKRLFYGASDSKQGAVESNLRYFNSSACFHR 120 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PEIY GI + SR ++++FF++ R Sbjct: 121 PEIYSGILSEHSRFLMKEFFQKMR 144 >gi|169599362|ref|XP_001793104.1| hypothetical protein SNOG_02499 [Phaeosphaeria nodorum SN15] gi|111069591|gb|EAT90711.1| hypothetical protein SNOG_02499 [Phaeosphaeria nodorum SN15] Length = 265 Score = 183 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 45/142 (31%), Positives = 69/142 (48%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM A+ A+ A +E PVG V V + +II R N + T HAE +AI Sbjct: 70 HERFMREAIAMAELALKSDETPVGCVFVKDGEIIGRGMNETNRTLNGTRHAEFVAIAGIL 129 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 +IL E DLYVT+EPC MCA+ + IR +Y+G N + GG ++ + Sbjct: 130 SKSPVKILNETDLYVTVEPCVMCASMLRQYGIRAVYFGCWNERFGGTGGVLNIHSDPSID 189 Query: 124 HSPEIYPGISEQRSRQIIQDFF 145 + GI + + +++ F+ Sbjct: 190 KPYPVTGGIFREEAIMLLRKFY 211 >gi|228470550|ref|ZP_04055407.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas uenonis 60-3] gi|228307677|gb|EEK16653.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas uenonis 60-3] Length = 155 Score = 183 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 5/146 (3%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M AL++A A +E+P+GAV + +I++++ N+ L D TAHAE+LAI Sbjct: 12 DERMMQLALQQALVAYEADEVPIGAVIAVGTRILAKSHNQVELLNDPTAHAEMLAITQAT 71 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + + LP+ LYVT+EPC MC A+ +I R+ YGA++PKGG Y+ H Sbjct: 72 AAIGGKYLPQCTLYVTVEPCPMCMGALRWTQIGRIVYGAADPKGG-----YMRYSSTLPH 126 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ R+++ +F+ +R Sbjct: 127 PKSVVMGGVCEEECRELMVSYFQRKR 152 >gi|166712352|ref|ZP_02243559.1| hypothetical protein Xoryp_13070 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 170 Score = 183 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNA-ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL A+ A +EIPVGA+ + ++ N N D +AHAEI+A+R Sbjct: 16 DVHWMQHALHLAECAERDHDEIPVGALILGAEGNVLGEGWNFNIASHDPSAHAEIVAMRD 75 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R LS L LYVTLEPC MCA A+ ARI R+ + AS+PK G + Sbjct: 76 AGRRLSNHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 135 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + + ++F+ +R Sbjct: 136 HNHRVRVCGGVLAAEASLRLTNYFRAKR 163 >gi|294787884|ref|ZP_06753128.1| tRNA-specific adenosine deaminase [Simonsiella muelleri ATCC 29453] gi|294484177|gb|EFG31860.1| tRNA-specific adenosine deaminase [Simonsiella muelleri ATCC 29453] Length = 240 Score = 183 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 53/128 (41%), Positives = 68/128 (53%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 EIPVGA+ + KII++A N V HAEI I +IL L E DLYVTLE Sbjct: 112 GEIPVGAILLHQGKIIAQAHNLCVAGHSVCQHAEIQVIEQAGKILQNYRLDECDLYVTLE 171 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI ARIRRL + A PK G + + + + GI S+ I+ Sbjct: 172 PCAMCAGAIVQARIRRLIFAAPEPKMGAAGSVLNIFANKRLNSHTAVKSGILADESKAIL 231 Query: 142 QDFFKERR 149 Q FF+++R Sbjct: 232 QQFFQQKR 239 >gi|189204912|ref|XP_001938791.1| tRNA-specific adenosine deaminase subunit TAD2 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187985890|gb|EDU51378.1| tRNA-specific adenosine deaminase subunit TAD2 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 234 Score = 183 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 45/142 (31%), Positives = 68/142 (47%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM A+ A+ A +E PVG V V + +II R N + T HAE +AI Sbjct: 9 HEGFMREAIAMAELALKSDETPVGCVFVKDGEIIGRGMNETNRTLNGTRHAEFVAIAGIL 68 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 IL E DLYVT+EPC MCA+ + IR +Y+G N + GG ++ + Sbjct: 69 SKHPISILNETDLYVTVEPCVMCASMLRQYGIRAVYFGCWNERFGGTGGVLNIHSDPSVD 128 Query: 124 HSPEIYPGISEQRSRQIIQDFF 145 + GI + + +++ F+ Sbjct: 129 KPYPVTGGIFREEAIMLLRKFY 150 >gi|317485386|ref|ZP_07944265.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bilophila wadsworthia 3_1_6] gi|316923345|gb|EFV44552.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bilophila wadsworthia 3_1_6] Length = 189 Score = 183 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+ +A+ A + E+PVGA+ V I++ N+ L D +AHAEI+A+R +L Sbjct: 47 MLQAIAKARQAPQQGEVPVGALIVDPAGTILAAEHNQPITLSDPSAHAEIMAMRSAGAVL 106 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPC MC AI AR+ + YGA++ K G +E+ L +H Sbjct: 107 GNYRLEGCILVVTLEPCLMCTGAIVHARLAGVVYGAADNKAGAVESCFNGLDLPFHNHRV 166 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 GI+ ++Q+FF++ R Sbjct: 167 WHMGGIAAPECASLLQNFFQKSR 189 >gi|218515307|ref|ZP_03512147.1| cytosine deaminase protein [Rhizobium etli 8C-3] Length = 170 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 90/147 (61%), Positives = 112/147 (76%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K N FM ALEEA+ A R E+P+GAV V+++ +SR+GNR REL DVTAHAEI AIR+ Sbjct: 5 KTNRFMEMALEEARAAGERGEVPIGAVVVVDDIAVSRSGNRTRELNDVTAHAEIAAIRLA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C L QE L DLYVTLEPCTMCAAAIS ARI RLYYGA +PKGG ++NG +FYT TC Sbjct: 65 CEALGQERLAGADLYVTLEPCTMCAAAISFARIHRLYYGAEDPKGGAVDNGVRFYTQPTC 124 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 HH+PE+Y G +E +S +I++ FF ++R Sbjct: 125 HHAPEVYSGFNEVQSAEILRTFFLQKR 151 >gi|304439146|ref|ZP_07399064.1| tRNA-specific adenosine deaminase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372278|gb|EFM25866.1| tRNA-specific adenosine deaminase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 147 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 51/142 (35%), Positives = 71/142 (50%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ + R EIPVGAV VL+ K++ N L D T HAE+ A++M + L Sbjct: 1 MKFALHLAKKSYRRGEIPVGAVVVLHGKVVGYGYNLKETLNDATEHAELRALKMAAKTLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L +Y TLEPC MCA A+ L RI +L GA +P+ G + +H + Sbjct: 61 TYHLEGTKMYTTLEPCAMCAGAMILFRIDKLIIGAKSPRMGAAGSNLNILDREGFNHKVK 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + I ++I FFK R Sbjct: 121 VEYSIYGDECSKLISKFFKNVR 142 >gi|329121024|ref|ZP_08249655.1| tRNA-specific adenosine deaminase [Dialister micraerophilus DSM 19965] gi|327471186|gb|EGF16640.1| tRNA-specific adenosine deaminase [Dialister micraerophilus DSM 19965] Length = 149 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 54/146 (36%), Positives = 87/146 (59%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ A++EA+ A + NE+P+GA+ + II+ + N + K++ HAEILAI+ Sbjct: 2 NDKDYMTLAIQEAKKAYMNNEMPIGAIITYKDIIIANSYNECEKNKNIFDHAEILAIKKA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++L+ L LYVT+EPC MCA AI +RI RL +GA N GGI + + ++ Sbjct: 62 SKLLNTSRLTGCTLYVTIEPCPMCAGAIMHSRIDRLVFGAFNDLYGGIISKYKIGKDSSM 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKER 148 +H+ + GI E +Q++ DFFK + Sbjct: 122 NHTLSVVSGIEENTCKQLVCDFFKNK 147 >gi|313886388|ref|ZP_07820111.1| cytidine and deoxycytidylate deaminase zinc-binding region [Porphyromonas asaccharolytica PR426713P-I] gi|332300169|ref|YP_004442090.1| CMP/dCMP deaminase zinc-binding protein [Porphyromonas asaccharolytica DSM 20707] gi|312924164|gb|EFR34950.1| cytidine and deoxycytidylate deaminase zinc-binding region [Porphyromonas asaccharolytica PR426713P-I] gi|332177232|gb|AEE12922.1| CMP/dCMP deaminase zinc-binding protein [Porphyromonas asaccharolytica DSM 20707] Length = 153 Score = 183 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 5/146 (3%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M AL++A A +E+P+GAV + +I++++ N+ L D TAHAE+LAI Sbjct: 12 DERMMQLALQQALVAYEADEVPIGAVIAVGTRILAKSHNQVELLNDPTAHAEMLAITQAT 71 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + + LP+ LYVT+EPC MC A+ +I R+ YG ++PKGG Y+ A H Sbjct: 72 AAIGGKYLPQCTLYVTVEPCPMCMGALRWTQIGRIVYGTADPKGG-----YMHYSDALPH 126 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 I G+ E+ R+++ +F+ +R Sbjct: 127 PKSIIVGGVCEEECRELMVSYFRRKR 152 >gi|260463254|ref|ZP_05811455.1| CMP/dCMP deaminase zinc-binding [Mesorhizobium opportunistum WSM2075] gi|259030844|gb|EEW32119.1| CMP/dCMP deaminase zinc-binding [Mesorhizobium opportunistum WSM2075] Length = 149 Score = 183 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 72/129 (55%), Positives = 94/129 (72%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 R E+PVGAV +++ AGNR REL D TAHAE+LAIR C L+ E L DLYVTL Sbjct: 20 RGEVPVGAVIASGGTVVASAGNRTRELADPTAHAEMLAIREACGKLATERLTGHDLYVTL 79 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA AIS AR+RRLY+GA++ KGG + NG +F+ TCHH+P+IYPG++E + + Sbjct: 80 EPCAMCAGAISFARLRRLYFGAADEKGGAVVNGVRFFASPTCHHAPDIYPGMAETEAGLL 139 Query: 141 IQDFFKERR 149 ++ FF+ERR Sbjct: 140 LKGFFRERR 148 >gi|258545205|ref|ZP_05705439.1| tRNA-specific adenosine deaminase [Cardiobacterium hominis ATCC 15826] gi|258519557|gb|EEV88416.1| tRNA-specific adenosine deaminase [Cardiobacterium hominis ATCC 15826] Length = 151 Score = 183 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 53/129 (41%), Positives = 74/129 (57%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+P+GA+ V N +II+ A NR D TAHAEILA+R G + L + V LYVTLE Sbjct: 21 GEVPIGAILVANGEIIASAHNRTVSDHDPTAHAEILALRAGGQALGNHRMRGVSLYVTLE 80 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP-EIYPGISEQRSRQI 140 PC MC A+ ARI RL +GA + + G + +H EI G+ E+ R+ Sbjct: 81 PCIMCTGALIQARIDRLVFGAYDSRIGACGSAFDLARHRRLNHHIHEIKGGVLEEACREQ 140 Query: 141 IQDFFKERR 149 +Q FF+++R Sbjct: 141 LQRFFQQKR 149 >gi|329113789|ref|ZP_08242560.1| Putative deaminase [Acetobacter pomorum DM001] gi|326696799|gb|EGE48469.1| Putative deaminase [Acetobacter pomorum DM001] Length = 151 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 57/143 (39%), Positives = 89/143 (62%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL +A AA E+PVGAV + + ++++AGNR EL D +AHAE+L +R + Sbjct: 7 MELALWQAHLAAANGEVPVGAVLLDSAGNVLAQAGNRVEELHDPSAHAEMLVMREAVQQR 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + L+V+LEPC MCAAA++ R+ R+ +GA +PKGGG+E+G + H Sbjct: 67 QGQKLADCTLFVSLEPCPMCAAAMAHFRLGRVVFGAYDPKGGGVEHGARLPHRPETLHRM 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ EQ S ++++ FF+ R Sbjct: 127 EVIGGVREQESAEMLKTFFQTLR 149 >gi|256786485|ref|ZP_05524916.1| deaminase [Streptomyces lividans TK24] Length = 151 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 2/128 (1%) Query: 23 EIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PVGAV + + ++S N D TAHAE+LAIR L + L L VTL Sbjct: 24 DVPVGAVVLAPDGRTVLSAGHNEREATGDPTAHAEVLAIRRAAGELGEWRLSGCTLVVTL 83 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ +R+ R+ YGA + K G + +H PE+ G+ ++ Sbjct: 84 EPCTMCAGALVQSRVDRVVYGARDDKAGAAGSLWDVVRDRRLNHRPEVIEGVLADDCARL 143 Query: 141 IQDFFKER 148 + DFF++R Sbjct: 144 LTDFFRDR 151 >gi|328943526|ref|ZP_08240991.1| tRNA-specific adenosine deaminase [Atopobium vaginae DSM 15829] gi|327491495|gb|EGF23269.1| tRNA-specific adenosine deaminase [Atopobium vaginae DSM 15829] Length = 237 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 55/146 (37%), Positives = 77/146 (52%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M CAL +AQ AAL E+P+GAV V NN I+S A N + + + HAE +A+ Sbjct: 89 DTYYMHCALAQAQKAALEQEVPIGAVVVCNNTILSAAHNLRQHSHNPSDHAEFIAMLQAA 148 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L L +YVTLEPC MCA + ARI R +GA + K G + + Sbjct: 149 KKLDSWHLERCCVYVTLEPCLMCAGLMLNARIARCVFGAYDQKAGACGSLYNVSNDFRLN 208 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 HS E+ G+ S ++Q FFK +R Sbjct: 209 HSFELKGGVLADESANLLQQFFKHKR 234 >gi|167903219|ref|ZP_02490424.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei NCTC 13177] gi|254179364|ref|ZP_04885963.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 1655] gi|184209904|gb|EDU06947.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 1655] Length = 198 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL A+ A E+PVGAV V +++I+R N D +AHAE+ A+R Sbjct: 31 ERDRRYMRLALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 90 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L +P +LYVTLEPC MC+ AI ARI R+ +GA +PK G + + A Sbjct: 91 AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIGRVVFGAPDPKTGACGSVVDAFADAR 150 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ +++ FF +RR Sbjct: 151 LNHHTTVEGGVLADECGAVLKSFFAQRR 178 >gi|284989070|ref|YP_003407624.1| CMP/dCMP deaminase protein [Geodermatophilus obscurus DSM 43160] gi|284062315|gb|ADB73253.1| CMP/dCMP deaminase zinc-binding protein [Geodermatophilus obscurus DSM 43160] Length = 154 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 2/130 (1%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVT 79 + P+GAV + + +++ A N + D TAHAE+LA+R R+ L L VT Sbjct: 23 GDTPIGAVVLGPDGTVLAEAANEREKQGDPTAHAEVLALRAAARVHGDGWRLTGTTLVVT 82 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPCTMCA A LAR+ R+ YGA +PK G + +H P++ G+ + S Sbjct: 83 LEPCTMCAGASVLARVDRIVYGADDPKAGAAGSLWDVVRDRRLNHRPQVTGGVRAEESAT 142 Query: 140 IIQDFFKERR 149 +++ FF+ +R Sbjct: 143 LLRAFFRRQR 152 >gi|326470308|gb|EGD94317.1| tRNA-specific adenosine deaminase subunit Tad2p/ADAT2 [Trichophyton tonsurans CBS 112818] gi|326481147|gb|EGE05157.1| cytidine and deoxycytidylate deaminase [Trichophyton equinum CBS 127.97] Length = 189 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 49/145 (33%), Positives = 75/145 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + K VFM AL+ A+ A E PVG V V +++I N + + T HAE LAI Sbjct: 7 LSKHEVFMKMALKMAETALAVGETPVGCVLVNKDRVIGSGMNDTNKSLNGTRHAEFLAIE 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + I E DLYVT+EPC MCA+A+ +IR +Y+G +N + GG ++ Sbjct: 67 EALRSYPRSIFRETDLYVTVEPCIMCASALRQYQIRSVYFGCANERFGGTGGVLTLHSDP 126 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +Y GI + + +++ F+ Sbjct: 127 AIDQPYPVYGGIYRKEAIMLLRKFY 151 >gi|254441373|ref|ZP_05054866.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Octadecabacter antarcticus 307] gi|198251451|gb|EDY75766.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Octadecabacter antarcticus 307] Length = 151 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 71/130 (54%), Positives = 89/130 (68%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+P+GAV V +I+ AGNR REL D TAHAEILAIR C L QE L D+YVT Sbjct: 20 RGEVPIGAVIVSPTGLVIAAAGNRTRELNDPTAHAEILAIRAACAELGQERLTGHDIYVT 79 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCAAAIS AR+ RLYYGAS+PK GG+ + ++ CHH+PE+Y G+S S Sbjct: 80 LEPCPMCAAAISNARLARLYYGASDPKSGGVAQAPRVFSHPQCHHAPEVYDGLSADTSET 139 Query: 140 IIQDFFKERR 149 +++ FF +R Sbjct: 140 LLKSFFAAKR 149 >gi|19551479|ref|NP_599481.1| cytosine/adenosine deaminase [Corynebacterium glutamicum ATCC 13032] gi|145294347|ref|YP_001137168.1| hypothetical protein cgR_0302 [Corynebacterium glutamicum R] gi|140844267|dbj|BAF53266.1| hypothetical protein [Corynebacterium glutamicum R] Length = 159 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 52/151 (34%), Positives = 75/151 (49%), Gaps = 3/151 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59 +K M AL+ A+ ++PVGAV +I++ A NR +D TAHAEI+A+ Sbjct: 10 IKDDERRMRHALDIARQ-TPEGDVPVGAVIYAPTGEILATATNRREADRDPTAHAEIIAL 68 Query: 60 RMGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 R R S L + VTLEPC+MCA A+ ARI R+ +GA P+ G + Sbjct: 69 RRAARRFSDGWRLSDCTAVVTLEPCSMCAGALVGARIGRIVFGAFEPRTGACGSVFDVVR 128 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI E ++ +FF+ R Sbjct: 129 DPAVLHKVEVSGGILEPECAALMTEFFELHR 159 >gi|330933338|ref|XP_003304140.1| hypothetical protein PTT_16586 [Pyrenophora teres f. teres 0-1] gi|311319472|gb|EFQ87774.1| hypothetical protein PTT_16586 [Pyrenophora teres f. teres 0-1] Length = 293 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 45/142 (31%), Positives = 67/142 (47%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM A+ A+ A +E PVG V V + II R N + T HAE +AI Sbjct: 68 HEGFMREAIAMAELALKSDETPVGCVFVKDGHIIGRGMNETNRTLNGTRHAEFVAIAGIL 127 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 IL E DLYVT+EPC MCA+ + IR +Y+G N + GG ++ + Sbjct: 128 SKHPISILNETDLYVTVEPCVMCASMLRQYGIRAVYFGCWNERFGGTGGVLNIHSDPSVD 187 Query: 124 HSPEIYPGISEQRSRQIIQDFF 145 + GI + + +++ F+ Sbjct: 188 KPYPVTGGIFREEAIMLLRKFY 209 >gi|256397666|ref|YP_003119230.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM 44928] gi|256363892|gb|ACU77389.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM 44928] Length = 157 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 13/141 (9%) Query: 22 NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ------------ 68 ++P+GAV + +I++ N D T HAEI+AIR L Sbjct: 15 GDVPIGAVILDPTGTVIAQGRNTREAEGDPTGHAEIVAIRSAAHTLHTKAAQTDPKAPPT 74 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 L + L VTLEPC MCA AI L+R+ R+ +GA +PK G + +H+PE+ Sbjct: 75 WRLTDCTLVVTLEPCPMCAGAIVLSRLTRVVFGAWDPKAGAAGSLYDILRDPRLNHTPEV 134 Query: 129 YPGISEQRSRQIIQDFFKERR 149 PG+ E + + FF+ R Sbjct: 135 IPGVLEPQCHAALNRFFEHHR 155 >gi|271970484|ref|YP_003344680.1| CMP/dCMP deaminase zinc-binding protein [Streptosporangium roseum DSM 43021] gi|270513659|gb|ACZ91937.1| CMP/dCMP deaminase zinc-binding protein [Streptosporangium roseum DSM 43021] Length = 154 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 1/128 (0%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV + + +++RAGN L D TAHAE+LA+R R + L L VTLE Sbjct: 23 EVPVGAVVLGPDGSVLARAGNDRESLNDPTAHAEVLALREAARARGEWRLTGCTLVVTLE 82 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PCTMCA A LAR+ R+ YGA++ KGG + +H PE+ G+ + ++ Sbjct: 83 PCTMCAGASVLARVDRIVYGATDAKGGAAGSLWDVVRDRRLNHRPEVVMGVLAEECAGVL 142 Query: 142 QDFFKERR 149 +FF RR Sbjct: 143 TEFFTVRR 150 >gi|239942817|ref|ZP_04694754.1| putative deaminase [Streptomyces roseosporus NRRL 15998] gi|291446287|ref|ZP_06585677.1| deaminase [Streptomyces roseosporus NRRL 15998] gi|291349234|gb|EFE76138.1| deaminase [Streptomyces roseosporus NRRL 15998] Length = 142 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PVGAV + + ++ N D TAHAEILA+R + + L + L VTL Sbjct: 15 GDVPVGAVVLGPDGTELATGHNEREATGDPTAHAEILALRRAAEAVGEWRLTDCTLVVTL 74 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ +R+ R+ YGA + K G + +H PE+ G+ E+ + Sbjct: 75 EPCTMCAGALVQSRVARVVYGARDEKAGAAGSLWDVIRDRRLNHRPEVIAGVLERECAEQ 134 Query: 141 IQDFFK 146 + FF+ Sbjct: 135 LTAFFR 140 >gi|289208495|ref|YP_003460561.1| CMP/dCMP deaminase zinc-binding protein [Thioalkalivibrio sp. K90mix] gi|288944126|gb|ADC71825.1| CMP/dCMP deaminase zinc-binding protein [Thioalkalivibrio sp. K90mix] Length = 175 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL +A+ AA E+PVGAV V ++ A N D TAHAEI +R Sbjct: 27 HAYWMDVALAQAERAAEVGEVPVGAVLVDAEGYCLAVAHNAPIGEHDATAHAEIRVLRRA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + S L LYVTLEPC+MCA A+ AR+ RL + AS+P+ G Sbjct: 87 GKRCSNYRLTGTTLYVTLEPCSMCAGAMIHARVERLVFAASDPRTGAAGGAIDLLHHPAH 146 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E G++ +RS +++++FF+ RR Sbjct: 147 NHRLECIEGVAAKRSAELLRNFFRLRR 173 >gi|327292493|ref|XP_003230945.1| tRNA-specific adenosine deaminase subunit TAD2 [Trichophyton rubrum CBS 118892] gi|326466882|gb|EGD92335.1| tRNA-specific adenosine deaminase subunit TAD2 [Trichophyton rubrum CBS 118892] Length = 189 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 49/145 (33%), Positives = 75/145 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + K VFM AL+ A+ A E PVG V V +++I N + + T HAE LAI Sbjct: 7 LSKHEVFMKMALKMAETALAVGETPVGCVLVNKDRVIGSGMNDTNKSLNGTRHAEFLAIE 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + I E DLYVT+EPC MCA+A+ +IR +Y+G +N + GG ++ Sbjct: 67 EALRSHPRSIFRETDLYVTVEPCIMCASALRQYQIRSVYFGCANERFGGTGGVLTLHSDP 126 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +Y GI + + +++ F+ Sbjct: 127 AIDQPYPVYGGIYRKEAIMLLRKFY 151 >gi|308234244|ref|ZP_07664981.1| CMP/dCMP deaminase zinc-binding protein [Atopobium vaginae DSM 15829] Length = 216 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 55/146 (37%), Positives = 77/146 (52%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M CAL +AQ AAL E+P+GAV V NN I+S A N + + + HAE +A+ Sbjct: 68 DTYYMHCALAQAQKAALEQEVPIGAVVVCNNTILSAAHNLRQHSHNPSDHAEFIAMLQAA 127 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L L +YVTLEPC MCA + ARI R +GA + K G + + Sbjct: 128 KKLDSWHLERCCVYVTLEPCLMCAGLMLNARIARCVFGAYDQKAGACGSLYNVSNDFRLN 187 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 HS E+ G+ S ++Q FFK +R Sbjct: 188 HSFELKGGVLADESANLLQQFFKHKR 213 >gi|254297249|ref|ZP_04964702.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 406e] gi|157807925|gb|EDO85095.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 406e] Length = 198 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL A+ A E+PVGAV V +++I+R N D +AHAE+ A+R Sbjct: 31 ERDRRYMRLALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 90 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L +P +LYVTLEPC MC+ AI ARI R+ +GA +PK G + + A Sbjct: 91 AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 150 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ +++ FF +RR Sbjct: 151 LNHHTTVEGGVLADECGAVLKSFFAQRR 178 >gi|126739257|ref|ZP_01754951.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter sp. SK209-2-6] gi|126719874|gb|EBA16582.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter sp. SK209-2-6] Length = 154 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 75/144 (52%), Positives = 105/144 (72%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M+ AL+EA+ AA R E+PVGAV + +++RAGNR REL D TAHAEIL +R GC+ Sbjct: 11 YMNLALDEARAAARRGEVPVGAVLINSKGDVVARAGNRTRELNDPTAHAEILVLREGCKA 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + E L DLYVTLEPC MCAAA++ ARI R+YYGAS+PK GG+ +G ++ HH Sbjct: 71 IGSERLMGYDLYVTLEPCAMCAAALAAARISRIYYGASDPKSGGVAHGACVFSHPQAHHV 130 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+Y GISE+ + ++++ FF+++R Sbjct: 131 PEVYEGISEREAAELLKVFFEQKR 154 >gi|254198049|ref|ZP_04904471.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei S13] gi|169654790|gb|EDS87483.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei S13] Length = 198 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL A+ A E+PVGAV V +++I+R N D +AHAE+ A+R Sbjct: 31 ERDRRYMRLALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 90 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L +P +LYVTLEPC MC+ AI ARI R+ +GA +PK G + + A Sbjct: 91 AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 150 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ +++ FF +RR Sbjct: 151 LNHHTTVEGGVLADECGAVLKSFFAQRR 178 >gi|149185197|ref|ZP_01863514.1| CMP/dCMP deaminase, zinc-binding protein [Erythrobacter sp. SD-21] gi|148831308|gb|EDL49742.1| CMP/dCMP deaminase, zinc-binding protein [Erythrobacter sp. SD-21] Length = 142 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 65/128 (50%), Positives = 87/128 (67%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV + II+ A N RE D TAHAEILAIR L QE L +L+VTLE Sbjct: 15 GEVPVGAVITRDGAIIAEAHNTPRETCDPTAHAEILAIRRAAEALGQERLTTCELWVTLE 74 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI AR+ ++YYGAS+PKGG +E+G + + C H PE+Y G+ E+R+ +++ Sbjct: 75 PCAMCAGAIVHARLAKVYYGASDPKGGAVEHGARVFEQEQCLHKPEVYAGLGEERAAEML 134 Query: 142 QDFFKERR 149 +DFF+ RR Sbjct: 135 RDFFRGRR 142 >gi|225681358|gb|EEH19642.1| tRNA-specific adenosine deaminase subunit TAD2 [Paracoccidioides brasiliensis Pb03] Length = 197 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 48/145 (33%), Positives = 73/145 (50%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K FM AL+ + A E PVG V V N +II N + + T HAE LA+ Sbjct: 16 KHEYFMRKALDMGEEALASGETPVGCVLVHNEEIIGSGMNDTNKSMNGTRHAEFLAVEEV 75 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R + I E DLYVT+EPC MCA+A+ RIR +Y+G +N + GG ++ Sbjct: 76 LRSHPRSIFHETDLYVTVEPCIMCASALRQYRIRHVYFGCANERFGGTGGVLNLHSDPGI 135 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKE 147 E+ G+ + + +++ F+ + Sbjct: 136 DPPYELTGGLFRKEAIMLLRRFYIQ 160 >gi|168184980|ref|ZP_02619644.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum Bf] gi|237793341|ref|YP_002860893.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum Ba4 str. 657] gi|182671972|gb|EDT83933.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum Bf] gi|229261589|gb|ACQ52622.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum Ba4 str. 657] Length = 148 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 56/145 (38%), Positives = 79/145 (54%), Gaps = 1/145 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N ++ A+ EA+ A E+PVGA+ V NKII+++ N LKD TAHAEILAI+ C Sbjct: 2 NDYIEYAIIEAKKALAIGEVPVGAIIVKENKIIAKSHNLKESLKDPTAHAEILAIKEACN 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L +YVTLEPC MCA+AI +RI L+ G +P GG + + Sbjct: 62 TIHNWRLKGCKMYVTLEPCAMCASAIIQSRISELHIGTFDPVGGACGSVVNITNNSYLKS 121 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + I + + +II +FFK R Sbjct: 122 NLSIKW-LYDDECSKIITNFFKNIR 145 >gi|167824713|ref|ZP_02456184.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 9] gi|226200116|ref|ZP_03795662.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei Pakistan 9] gi|225927800|gb|EEH23841.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei Pakistan 9] Length = 198 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL A+ A E+PVGAV V +++I+R N D +AHAE+ A+R Sbjct: 31 ERDRRYMRLALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 90 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L +P +LYVTLEPC MC+ AI ARI R+ +GA +PK G + + A Sbjct: 91 AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 150 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ +++ FF +RR Sbjct: 151 LNHHTTVEGGVLADECGAVLKSFFAQRR 178 >gi|167919469|ref|ZP_02506560.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei BCC215] Length = 198 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL A+ A E+PVGAV V +++I+R N D +AHAE+ A+R Sbjct: 31 ERDRRYMRLALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 90 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L +P +LYVTLEPC MC+ AI ARI R+ +GA +PK G + + A Sbjct: 91 AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 150 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ +++ FF +RR Sbjct: 151 LNHHTTVEGGVLADECGAVLKSFFAQRR 178 >gi|76811739|ref|YP_333930.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 1710b] gi|121599544|ref|YP_993329.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei SAVP1] gi|124383998|ref|YP_001029233.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei NCTC 10229] gi|126450143|ref|YP_001080836.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei NCTC 10247] gi|167000596|ref|ZP_02266407.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei PRL-20] gi|238562434|ref|ZP_04610071.1| tRNA-specific adenosine deaminase [Burkholderia mallei GB8 horse 4] gi|254177488|ref|ZP_04884143.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei ATCC 10399] gi|254189248|ref|ZP_04895759.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei Pasteur 52237] gi|254200108|ref|ZP_04906474.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei FMH] gi|254206447|ref|ZP_04912799.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei JHU] gi|254259652|ref|ZP_04950706.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 1710a] gi|254358144|ref|ZP_04974417.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei 2002721280] gi|76581192|gb|ABA50667.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 1710b] gi|121228354|gb|ABM50872.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei SAVP1] gi|124292018|gb|ABN01287.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei NCTC 10229] gi|126243013|gb|ABO06106.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei NCTC 10247] gi|147749704|gb|EDK56778.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei FMH] gi|147753890|gb|EDK60955.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei JHU] gi|148027271|gb|EDK85292.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei 2002721280] gi|157936927|gb|EDO92597.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei Pasteur 52237] gi|160698527|gb|EDP88497.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei ATCC 10399] gi|238522629|gb|EEP86072.1| tRNA-specific adenosine deaminase [Burkholderia mallei GB8 horse 4] gi|243063523|gb|EES45709.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei PRL-20] gi|254218341|gb|EET07725.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 1710a] Length = 198 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL A+ A E+PVGAV V +++I+R N D +AHAE+ A+R Sbjct: 31 ERDRRYMRLALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 90 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L +P +LYVTLEPC MC+ AI ARI R+ +GA +PK G + + A Sbjct: 91 AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 150 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ +++ FF +RR Sbjct: 151 LNHHTTVEGGVLADECGAVLKSFFAQRR 178 >gi|315040523|ref|XP_003169639.1| tRNA-specific adenosine deaminase subunit TAD2 [Arthroderma gypseum CBS 118893] gi|311346329|gb|EFR05532.1| tRNA-specific adenosine deaminase subunit TAD2 [Arthroderma gypseum CBS 118893] Length = 189 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 51/145 (35%), Positives = 75/145 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + K VFM AL A+ A E PVG V V +K+I N + + T HAE LAI Sbjct: 7 LSKHEVFMKMALRMAETALAVGETPVGCVLVNKDKVIGSGMNDTNKSLNGTRHAEFLAIE 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + IL E DLYVT+EPC MCA+A+ R+R +Y+G +N + GG ++ Sbjct: 67 EALRSHPRSILHETDLYVTVEPCIMCASALRQYRVRSVYFGCANERFGGTGGVLSLHSDP 126 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145 +Y GI + + +++ F+ Sbjct: 127 AIELPYPVYGGIFRKEAIMLLRKFY 151 >gi|148555238|ref|YP_001262820.1| tRNA-adenosine deaminase [Sphingomonas wittichii RW1] gi|148500428|gb|ABQ68682.1| tRNA-adenosine deaminase [Sphingomonas wittichii RW1] Length = 150 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 67/128 (52%), Positives = 85/128 (66%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++++ A N D TAHAEI AIR L + L + DLYVTLE Sbjct: 23 GEVPVGAVIVRGDEVVAAAANAMCGGTDPTAHAEIEAIRAASARLGAQRLDDCDLYVTLE 82 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI+ AR+RRLYYGA +PKGG + NG +F+T TCHH PE Y GI E + ++ Sbjct: 83 PCAMCAGAIAHARLRRLYYGADDPKGGAVANGPRFFTQPTCHHRPETYGGIGEGEAAALL 142 Query: 142 QDFFKERR 149 +DFF RR Sbjct: 143 RDFFAARR 150 >gi|126441141|ref|YP_001059426.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 668] gi|126454685|ref|YP_001066697.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 1106a] gi|134277676|ref|ZP_01764391.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 305] gi|167739120|ref|ZP_02411894.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 14] gi|217421765|ref|ZP_03453269.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 576] gi|237812753|ref|YP_002897204.1| tRNA-specific adenosine deaminase [Burkholderia pseudomallei MSHR346] gi|242317933|ref|ZP_04816949.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 1106b] gi|126220634|gb|ABN84140.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 668] gi|126228327|gb|ABN91867.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 1106a] gi|134251326|gb|EBA51405.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 305] gi|217395507|gb|EEC35525.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 576] gi|237506312|gb|ACQ98630.1| tRNA-specific adenosine deaminase [Burkholderia pseudomallei MSHR346] gi|242141172|gb|EES27574.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 1106b] Length = 198 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL A+ A E+PVGAV V +++I+R N D +AHAE+ A+R Sbjct: 31 ERDRRYMRLALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 90 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L +P +LYVTLEPC MC+ AI ARI R+ +GA +PK G + + A Sbjct: 91 AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 150 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ +++ FF +RR Sbjct: 151 LNHHTTVEGGVLADECGAVLKSFFAQRR 178 >gi|307700388|ref|ZP_07637427.1| cytidine and deoxycytidylate deaminase zinc-binding region [Mobiluncus mulieris FB024-16] gi|307614373|gb|EFN93603.1| cytidine and deoxycytidylate deaminase zinc-binding region [Mobiluncus mulieris FB024-16] Length = 174 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 55/144 (38%), Positives = 77/144 (53%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNR-ELKDVTAHAEILAIRMGCRI 65 + A + A AA+ ++PVGAV + I+ N+ D TAHAEI+A+R Sbjct: 14 LDTAFDLAARAAVSGDVPVGAVLLTAQGIVTGLGLNQREIPPHDPTAHAEIVAMREAAGR 73 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L L VTLEPCTMCA AI ARI RL +GA + K G + + +H Sbjct: 74 LRTWNLAGCTLVVTLEPCTMCAGAIVTARISRLIFGAWDSKAGACGSIRDVVRDSRLNHQ 133 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G++E+R ++QDFF +RR Sbjct: 134 VEVIGGVAEKRGVALLQDFFGKRR 157 >gi|308176278|ref|YP_003915684.1| cytosine deaminase [Arthrobacter arilaitensis Re117] gi|307743741|emb|CBT74713.1| putative cytosine deaminase [Arthrobacter arilaitensis Re117] Length = 158 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 7/154 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M AL EA+ A +++P+GAV + ++++ N D TAHAE++AIR Sbjct: 4 EFETWMDLALAEARAALATDDVPIGAVILSPAGEVLATGRNEREAGNDPTAHAEVVAIRN 63 Query: 62 GCRIL------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + L L + L VTLEPC MCA AI L+RI +L +GA + K G + Sbjct: 64 AVKALEAKGEDDGWRLSDCTLVVTLEPCAMCAGAIVLSRIPKLVFGAWDEKAGACGSVFD 123 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+Y + E+ +++++FF+ +R Sbjct: 124 IVREPRLNHWVEVYSRVKEEECAELLREFFRGKR 157 >gi|148653387|ref|YP_001280480.1| CMP/dCMP deaminase, zinc-binding [Psychrobacter sp. PRwf-1] gi|148572471|gb|ABQ94530.1| CMP/dCMP deaminase, zinc-binding [Psychrobacter sp. PRwf-1] Length = 190 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 58/144 (40%), Positives = 82/144 (56%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM AL AQ A + E+PVGAV V +NKII N+ D TAHAE++A+R C+ L Sbjct: 37 FMRRALALAQQGASQEEVPVGAVLVCDNKIIGEGFNQPITTSDPTAHAEVVALRCACQTL 96 Query: 67 SQEIL-PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L P LYVTLEPCTMC A+ AR+ RL + P+ G + + + +H Sbjct: 97 QNYRLPPNTTLYVTLEPCTMCLGALIHARLARLVFATFEPRAGMVGSQLNLTEMDFYNHK 156 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + Y G+ +Q+S+ ++ FF+ RR Sbjct: 157 MQAYSGLLQQQSQTQLRSFFRARR 180 >gi|295671881|ref|XP_002796487.1| tRNA-specific adenosine deaminase [Paracoccidioides brasiliensis Pb01] gi|226283467|gb|EEH39033.1| tRNA-specific adenosine deaminase [Paracoccidioides brasiliensis Pb01] Length = 197 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 47/145 (32%), Positives = 73/145 (50%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K FM AL+ + A E PVG V V N +II N + + T HAE LA+ Sbjct: 16 KHEYFMRKALDMGEEALASGETPVGCVLVHNEEIIGSGMNDTNKSMNGTRHAEFLAVEEV 75 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R + I E DLYVT+EPC MCA+A+ RIR +++G +N + GG ++ Sbjct: 76 LRSYPRSIFHETDLYVTVEPCIMCASALRQYRIRHVFFGCANERFGGTGGVLNLHSDPGI 135 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKE 147 E+ G+ + + +++ F+ + Sbjct: 136 DPPYELTGGLFRKEAIMLLRRFYIQ 160 >gi|332284214|ref|YP_004416125.1| putative zinc-binding hydrolase [Pusillimonas sp. T7-7] gi|330428167|gb|AEC19501.1| putative zinc-binding hydrolase [Pusillimonas sp. T7-7] Length = 152 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 48/132 (36%), Positives = 68/132 (51%), Gaps = 1/132 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE+A+ A E+PVGAV + ++I NR D T HAEI+A+R + Sbjct: 1 MRLALEQAELAYAAGEVPVGAVVLDAQGQLIGAGSNRTIGAHDPTGHAEIVALRAAAAHV 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP LYVTLEPC MC A+ AR+ R+ YGA +PK G + +T+ +H Sbjct: 61 RNYRLPGASLYVTLEPCAMCMGAMLHARLARVVYGAVDPKTGACGSVLSVHTVPQLNHQT 120 Query: 127 EIYPGISEQRSR 138 + G+ + Sbjct: 121 AVEGGVLAEECG 132 >gi|261880583|ref|ZP_06007010.1| tRNA-specific adenosine deaminase [Prevotella bergensis DSM 17361] gi|270332702|gb|EFA43488.1| tRNA-specific adenosine deaminase [Prevotella bergensis DSM 17361] Length = 151 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 83/148 (56%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +K +M A++EA+ A EIP+GA+ V ++IISRA N+ L DVTAHAE+LAI Sbjct: 9 QKDERYMRMAIQEAEAAFEEGEIPIGAIVVCRDRIISRAHNQTETLNDVTAHAEMLAITA 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + LP+ LYVT+EPC MCA AI ++I R+ YG K G + Y Sbjct: 69 AANTMGGKYLPDCTLYVTVEPCVMCAGAIGWSQIGRIVYGVGEEKRG-----YKRYAPDA 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ ++ + ++ FFK +R Sbjct: 124 LHPKTTVTSGVLQEECKALMISFFKNKR 151 >gi|258405729|ref|YP_003198471.1| CMP/dCMP deaminase zinc-binding [Desulfohalobium retbaense DSM 5692] gi|257797956|gb|ACV68893.1| CMP/dCMP deaminase zinc-binding protein [Desulfohalobium retbaense DSM 5692] Length = 165 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 56/144 (38%), Positives = 81/144 (56%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA+ A E+P+GAV V +K +++R GNR D TAHAEI+A+R C+ + Sbjct: 19 MELALDEARAAQTHGEVPIGAVLVDPDKRVLARGGNRTITDSDPTAHAEIVALRRACQSV 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP L VTLEPC MC A+ AR+ + + A +PK G I + + L +H Sbjct: 79 GNYRLPGAILAVTLEPCLMCLGALIQARLAGVVFAARDPKAGAIVSQLEGPHLPWLNHRF 138 Query: 127 EIYPGI-SEQRSRQIIQDFFKERR 149 + SR ++QDFF++RR Sbjct: 139 WVRETTAHAATSRALLQDFFRQRR 162 >gi|227876439|ref|ZP_03994551.1| nucleoside deaminase [Mobiluncus mulieris ATCC 35243] gi|227842980|gb|EEJ53177.1| nucleoside deaminase [Mobiluncus mulieris ATCC 35243] Length = 174 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 55/144 (38%), Positives = 78/144 (54%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISR-AGNRNR-ELKDVTAHAEILAIRMGCRI 65 + A + A AA+ ++PVGAV + I++ N+ D TAHAEI+A+R Sbjct: 14 LDTAFDLAARAAVSGDVPVGAVLLTAQGIVAGLGLNQREIPPHDPTAHAEIVAMREAAGR 73 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L L VTLEPCTMCA AI ARI RL +GA + K G + + +H Sbjct: 74 LRTWNLAGCTLVVTLEPCTMCAGAIVTARISRLIFGAWDSKAGACGSIRDVVRDSRLNHQ 133 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G++E+R ++QDFF +RR Sbjct: 134 VEVIGGVAEKRGVALLQDFFGKRR 157 >gi|168010085|ref|XP_001757735.1| predicted protein [Physcomitrella patens subsp. patens] gi|162691011|gb|EDQ77375.1| predicted protein [Physcomitrella patens subsp. patens] Length = 413 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 60/162 (37%), Positives = 79/162 (48%), Gaps = 14/162 (8%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL+EA+ AA E+PVGAV V NKII+R N D TAHAE+L IR Sbjct: 209 EEDLGFMQEALKEAKKAAKLGEVPVGAVLVHKNKIIARFHNEVETTGDPTAHAEMLCIRC 268 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY---- 117 L L +V LYVTLEPC MCA AI R+ + +GA N G + + + Sbjct: 269 AAAQLGGWRLTDVTLYVTLEPCPMCAGAILQGRVSEVVWGARNSLLGADGSWIKLFPVSS 328 Query: 118 ----------TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 L H + + G+ + I+Q FF RR Sbjct: 329 SGEQEPKCKDYLHPFHRTITVRRGVLGEECGDIMQTFFAMRR 370 >gi|303245260|ref|ZP_07331544.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio fructosovorans JJ] gi|302493109|gb|EFL52971.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio fructosovorans JJ] Length = 152 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 57/143 (39%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ ALE+A+ AA + E PVGAV + +++ AGN D TAHAEILA+R + Sbjct: 1 MALALEKARGAAAQGEAPVGAVVLSAAGELLGAAGNAPITRHDPTAHAEILALRQAAAHV 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP + VTLEPC MC A+ AR+ L YGAS+P+ G I + L +H Sbjct: 61 GNYRLPGSIMAVTLEPCVMCLGAMIHARVGLLVYGASDPRTGAIASMLPGPDLPFFNHRF 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 ++ G+ E +++DFF+ERR Sbjct: 121 DVLSGVLEATCGGLLRDFFRERR 143 >gi|229817012|ref|ZP_04447294.1| hypothetical protein BIFANG_02267 [Bifidobacterium angulatum DSM 20098] gi|229785757|gb|EEP21871.1| hypothetical protein BIFANG_02267 [Bifidobacterium angulatum DSM 20098] Length = 147 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 51/150 (34%), Positives = 67/150 (44%), Gaps = 4/150 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M M CALE A AA ++PVGA V + I N D AHAE+ A+ Sbjct: 1 MNDDKA-MRCALELAHRAAEHGDVPVGALVLDAHGHIAGEGWNTREVDGDPLAHAEVAAM 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R L + L VTLEPC MCA A I R+ +GA + K G + Sbjct: 60 REAAEH--GWNLADCTLVVTLEPCPMCAGACIQTHIGRIVFGAWDAKLGACGSVWDIPRD 117 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 PE+Y G+ E+ Q++ +FF RR Sbjct: 118 PHVGSVPEVYGGVMERECAQVLSEFFAARR 147 >gi|238021048|ref|ZP_04601474.1| hypothetical protein GCWU000324_00945 [Kingella oralis ATCC 51147] gi|237868028|gb|EEP69034.1| hypothetical protein GCWU000324_00945 [Kingella oralis ATCC 51147] Length = 238 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 51/145 (35%), Positives = 79/145 (54%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL +A AA E+PVGAV V +II++A NR ++ HAEI A+ + Sbjct: 94 ERWMRAALFQAAEAAKLGEVPVGAVVVHRGEIIAQAHNRCVADCSISHHAEIQALAAAGQ 153 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 +L L E D+YV+LEPC MCA+A+ AR+ R+ + A PK G + ++ + Sbjct: 154 VLGNYRLNECDVYVSLEPCAMCASAMIQARVARVVFAAHEPKTGAAGSVLNLFSNNQLNQ 213 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + G+ ++Q +Q FF+ RR Sbjct: 214 HTAMLGGLLADEAKQQLQAFFRLRR 238 >gi|148378037|ref|YP_001252578.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum A str. ATCC 3502] gi|153931005|ref|YP_001382436.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum A str. ATCC 19397] gi|153937691|ref|YP_001385989.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum A str. Hall] gi|153941479|ref|YP_001389392.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum F str. Langeland] gi|168181142|ref|ZP_02615806.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum NCTC 2916] gi|226947243|ref|YP_002802334.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum A2 str. Kyoto] gi|148287521|emb|CAL81583.1| putative cytosine deaminase [Clostridium botulinum A str. ATCC 3502] gi|152927049|gb|ABS32549.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum A str. ATCC 19397] gi|152933605|gb|ABS39104.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum A str. Hall] gi|152937375|gb|ABS42873.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum F str. Langeland] gi|182668031|gb|EDT80010.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum NCTC 2916] gi|226841341|gb|ACO84007.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum A2 str. Kyoto] gi|295317500|gb|ADF97877.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum F str. 230613] gi|322804299|emb|CBZ01849.1| tRNA-specific adenosine-34 deaminase [Clostridium botulinum H04402 065] Length = 145 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 56/145 (38%), Positives = 80/145 (55%), Gaps = 1/145 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N ++ A+ EA+ A E+PVGA+ V NKII+++ N LKD TAHAEILAI+ C Sbjct: 2 NDYIEYAIIEAKKALAIGEVPVGAIIVKENKIIAKSHNLKESLKDPTAHAEILAIKEACN 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L +YVTLEPC MCA+AI +RI L+ G +P GG + + + Sbjct: 62 TIHNWRLKGCKMYVTLEPCAMCASAIIQSRISELHIGTFDPVGGACGSVVNITNNSYLKN 121 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + I + + +II +FFK R Sbjct: 122 NLNIKW-LYDDECSRIITNFFKNIR 145 >gi|269976007|ref|ZP_06183011.1| tRNA-specific adenosine deaminase [Mobiluncus mulieris 28-1] gi|306817398|ref|ZP_07451143.1| tRNA-specific adenosine deaminase [Mobiluncus mulieris ATCC 35239] gi|269935835|gb|EEZ92365.1| tRNA-specific adenosine deaminase [Mobiluncus mulieris 28-1] gi|304649839|gb|EFM47119.1| tRNA-specific adenosine deaminase [Mobiluncus mulieris ATCC 35239] Length = 174 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 55/144 (38%), Positives = 78/144 (54%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISR-AGNRNR-ELKDVTAHAEILAIRMGCRI 65 + A + A AA+ ++PVGAV + I++ N+ D TAHAEI+A+R Sbjct: 14 LDTAFDLAARAAVSGDVPVGAVLLTAQGIVAGLGLNQREIPPHDPTAHAEIVAMREAAGR 73 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L L VTLEPCTMCA AI ARI RL +GA + K G + + +H Sbjct: 74 LRTWNLAGCTLVVTLEPCTMCAGAIVTARISRLIFGAWDSKAGACGSIRDVVRDSRLNHQ 133 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G++E+R ++QDFF +RR Sbjct: 134 VEVIGGVAEKRGVALLQDFFGKRR 157 >gi|167911457|ref|ZP_02498548.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei 112] Length = 185 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL A+ A E+PVGAV V +++I+R N D +AHAE+ A+R Sbjct: 31 ERDRRYMRLALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 90 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L +P +LYVTLEPC MC+ AI ARI R+ +GA +PK G + + A Sbjct: 91 AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 150 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ +++ FF +RR Sbjct: 151 LNHHTTVEGGVLADECGAVLKSFFAQRR 178 >gi|307579329|gb|ADN63298.1| CMP/dCMP deaminase zinc-binding protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 151 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 52/144 (36%), Positives = 74/144 (51%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALR-NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A AA +EIPVGAV + ++ N N D +AHAEI+A+R Sbjct: 1 MRHALTLAHRAATEFDEIPVGAVLISPEGTLLGEGCNYNITSHDPSAHAEIMALRAAGHQ 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L +P LYVTLEPC MCA AI ARI L Y A++PK G + +H Sbjct: 61 LRNHRMPGCTLYVTLEPCLMCAMAIIHARIAHLIYAAADPKTGACGSTFDILNDPRHNHH 120 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 +Y G+ + + + + ++F+ +R Sbjct: 121 VHVYGGLLAEEASRRLTNYFRTKR 144 >gi|324998977|ref|ZP_08120089.1| cytidine/deoxycytidylate deaminase [Pseudonocardia sp. P1] Length = 157 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 52/143 (36%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + + ALE A+ AA +++P+GAV + + ++ A N L D TAHAE+LA+R Sbjct: 6 DDRALGRALEVARGAAASDDVPIGAVVLDADGTELAAACNAREALGDPTAHAEVLALRAA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R++ L L VT+EPCTMCA AI LAR+ R+ +GA PK G + Sbjct: 66 ARVVGSWRLTGTTLAVTVEPCTMCAGAIGLARVERVVFGAWEPKTGAAGSLWDVLRDRRL 125 Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145 H PE+ G+ + ++Q+FF Sbjct: 126 SHRPEVVGGVRAGEAAALLQEFF 148 >gi|312219914|emb|CBX99856.1| hypothetical protein [Leptosphaeria maculans] Length = 259 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 44/142 (30%), Positives = 67/142 (47%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM A+ A+ A +E PVG V V + +II R N + T HAE +AI Sbjct: 59 HEGFMREAIAMAELALKSDETPVGCVFVKDGEIIGRGMNETNRTLNGTRHAEFVAIASIL 118 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 IL E DLYVT+EPC MCA+ + I+ +Y+G N + GG + + Sbjct: 119 SKHPISILNETDLYVTVEPCVMCASMLRQYGIKAVYFGCWNERFGGTGGVLNVHCDPSVD 178 Query: 124 HSPEIYPGISEQRSRQIIQDFF 145 + GI + + +++ F+ Sbjct: 179 KPYPVTGGIFREEAIMLLRKFY 200 >gi|84686242|ref|ZP_01014137.1| cytidine and deoxycytidylate deaminase family protein [Maritimibacter alkaliphilus HTCC2654] gi|84665769|gb|EAQ12244.1| cytidine and deoxycytidylate deaminase family protein [Rhodobacterales bacterium HTCC2654] Length = 150 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 70/130 (53%), Positives = 91/130 (70%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+PVGAV V + I+++AGNR REL D TAHAE L IR C E LP+ DLYVT Sbjct: 21 RGEVPVGAVLVGPDGTIVAQAGNRTRELSDPTAHAETLVIRAACAAAGSERLPDHDLYVT 80 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCAA IS ARIRRLYYGAS+PK GG +G + ++ CHH+P++Y GI+ + Sbjct: 81 LEPCPMCAAVISFARIRRLYYGASDPKSGGTAHGARVFSHPQCHHAPDVYDGIAAAEAET 140 Query: 140 IIQDFFKERR 149 +++ FF ++R Sbjct: 141 LLKTFFGKKR 150 >gi|300933920|ref|ZP_07149176.1| putative cytosine/adenosine deaminase [Corynebacterium resistens DSM 45100] Length = 173 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 4/149 (2%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M ALE A A R ++PVGAV + + ++ N+ + D HAEI AIR Sbjct: 27 QHEAWMRRALEVA-GATPRGDVPVGAVVYGPDGRELAVGFNQREKDSDPLGHAEIAAIRA 85 Query: 62 GCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L + L VTLEPC MCA A AR++R+ YGA PK G + A Sbjct: 86 AVAELGDAWRLEDCTLVVTLEPCAMCAGAALGARVKRIVYGAREPKTGACGSVWDLPREA 145 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E++ G+ ++++FF++ R Sbjct: 146 PL-HKAEVFGGVLRDECEALVKEFFEQLR 173 >gi|291303426|ref|YP_003514704.1| CMP/dCMP deaminase zinc-binding protein [Stackebrandtia nassauensis DSM 44728] gi|290572646|gb|ADD45611.1| CMP/dCMP deaminase zinc-binding protein [Stackebrandtia nassauensis DSM 44728] Length = 144 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 4/140 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A + ++P+GAV + I ++ A N D TAHAE++A+R + Sbjct: 1 MRRALAVAAESGS--DVPIGAVVYSPDGIELAAAHNLREATGDPTAHAELVALRRAAEVH 58 Query: 67 SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L VT+EPCTMCA AI+L+RI + +GA PK G + + H Sbjct: 59 GDGWRLSDCVLVVTVEPCTMCAGAITLSRIGTVVFGAWEPKTGAVGSLWDVVRDRRLAHR 118 Query: 126 PEIYPGISEQRSRQIIQDFF 145 P++Y G+ E +++ FF Sbjct: 119 PQVYSGVLEAECAALLRGFF 138 >gi|332704280|ref|ZP_08424368.1| CMP/dCMP deaminase, zinc-binding protein [Desulfovibrio africanus str. Walvis Bay] gi|332554429|gb|EGJ51473.1| CMP/dCMP deaminase, zinc-binding protein [Desulfovibrio africanus str. Walvis Bay] Length = 174 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 51/143 (35%), Positives = 71/143 (49%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL +A A E+PVGA + ++++A N L D TAHAE+L +R G L Sbjct: 23 MDVALRQAHEAGSMGEVPVGAALLSAEGSLLAQAHNAPLSLNDPTAHAEMLCLRQGASTL 82 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPC MC A+ ARI L GA +PK G + + + L +H Sbjct: 83 GNYRLTGCILAVTLEPCIMCLGALVHARIAGLVIGARDPKAGAVLSRLKGLRLPFLNHQF 142 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + GI + +++ FF RR Sbjct: 143 WVLEGIMAEDCGKLLSSFFLRRR 165 >gi|188588285|ref|YP_001922596.1| tRNA-specific adenosine deaminase [Clostridium botulinum E3 str. Alaska E43] gi|188498566|gb|ACD51702.1| tRNA-specific adenosine deaminase [Clostridium botulinum E3 str. Alaska E43] Length = 157 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 54/150 (36%), Positives = 81/150 (54%), Gaps = 2/150 (1%) Query: 1 MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M++ ++ F+ A EEA+ A + E+P+GAV V +N +IS+A N LKD TAHAEILAI Sbjct: 1 MEEKSMDFLDIAKEEAKKAMSKGEVPIGAVIVKDNIVISKAHNLKETLKDATAHAEILAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + L L ++YVTLEPCTMC +AI +RI +L+ G N G + Sbjct: 61 REASKFLDDWRLNGTEMYVTLEPCTMCTSAIIQSRISKLHIGTFNKDMGACGSIINLIDD 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + ++ ++ FF +R Sbjct: 121 RMLESFLNVNW-LYDEECSNLLMKFFNLKR 149 >gi|213157131|ref|YP_002319176.1| tRNA-specific adenosine deaminase [Acinetobacter baumannii AB0057] gi|215483589|ref|YP_002325810.1| tRNA-specific adenosine deaminase [Acinetobacter baumannii AB307-0294] gi|239502187|ref|ZP_04661497.1| putative deaminase [Acinetobacter baumannii AB900] gi|301345934|ref|ZP_07226675.1| putative deaminase [Acinetobacter baumannii AB056] gi|213056291|gb|ACJ41193.1| tRNA-specific adenosine deaminase [Acinetobacter baumannii AB0057] gi|213987060|gb|ACJ57359.1| tRNA-specific adenosine deaminase [Acinetobacter baumannii AB307-0294] Length = 158 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 58/139 (41%), Positives = 74/139 (53%), Gaps = 1/139 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A E+A+ AA + EIPVGAV V NK+I N L D TAHAEI AIR C L Sbjct: 1 MQLAYEQAELAAKQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESLK 60 Query: 68 QEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP + LYVTLEPCTMC A+ ARI+ + +G + PK G + + Q +H Sbjct: 61 NYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGYYNHKF 120 Query: 127 EIYPGISEQRSRQIIQDFF 145 G ++ Q + FF Sbjct: 121 TFEHGCLHEKCAQQLSLFF 139 >gi|170759519|ref|YP_001785356.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169406508|gb|ACA54919.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 145 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 57/145 (39%), Positives = 78/145 (53%), Gaps = 1/145 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N ++ A+ EA+ + E+PVGA+ V NKII+++ N LKD AHAEIL+I+ C Sbjct: 2 NDYIEYAIIEAKKSLAIGEVPVGAIIVKENKIIAKSHNLKETLKDPIAHAEILSIKKACN 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 IL L +YVTLEPC MCA+AI +RI LY G +P GG + A Sbjct: 62 ILGDWRLKGCKMYVTLEPCPMCASAIIQSRISELYIGTFDPVGGACGSAVNITNNAHLKS 121 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + I + +II +FFK R Sbjct: 122 NLNIKW-LYNDECSRIITNFFKNIR 145 >gi|193077204|gb|ABO11996.2| putative deaminase [Acinetobacter baumannii ATCC 17978] Length = 158 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 58/139 (41%), Positives = 74/139 (53%), Gaps = 1/139 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A E+A+ AA + EIPVGAV V NK+I N L D TAHAEI AIR C L Sbjct: 1 MQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESLK 60 Query: 68 QEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP + LYVTLEPCTMC A+ ARI+ + +G + PK G + + Q +H Sbjct: 61 NYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGYYNHKF 120 Query: 127 EIYPGISEQRSRQIIQDFF 145 G ++ Q + FF Sbjct: 121 TFEHGCLHEKCAQQLSLFF 139 >gi|116070709|ref|ZP_01467978.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. BL107] gi|116066114|gb|EAU71871.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. BL107] Length = 157 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + +M L+ AQ L E+PV AV + + + I NR +D HAE++A+R Sbjct: 5 DRFHEWMKVLLQRAQVNGLSGEVPVAAVVLGPDGRAIGHGRNRRETEQDPLGHAELVALR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 IL + L VTLEPC MCA A+ AR+ + +GA + K GG+ T Sbjct: 65 QAALILGDWRFNQCCLIVTLEPCPMCAGALVQARMGTVVFGAHDRKRGGLGGTMNLSTHP 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + HH + G+ E + ++ +FK+RR Sbjct: 125 SAHHKMTVIGGVMEAEASTQLEQWFKQRR 153 >gi|187934949|ref|YP_001887626.1| tRNA-specific adenosine deaminase [Clostridium botulinum B str. Eklund 17B] gi|187723102|gb|ACD24323.1| tRNA-specific adenosine deaminase [Clostridium botulinum B str. Eklund 17B] Length = 152 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 52/143 (36%), Positives = 77/143 (53%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A EEA+ A + E+P+GAV V ++ +IS+A N LKD TAHAEILAIR + L Sbjct: 3 FLDIAKEEARIAMSKGEVPIGAVIVKDDIVISKAHNLKETLKDATAHAEILAIRKAAKFL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L ++YVTLEPC+MCA+AI +RI +L+ G N G + Sbjct: 63 GDWRLKGTEMYVTLEPCSMCASAIIQSRISKLHIGTFNKDMGACGSVINLIDDRQLESFL 122 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + + ++ ++ FF +R Sbjct: 123 NVNW-LYDEECSNLLMKFFSLKR 144 >gi|212703407|ref|ZP_03311535.1| hypothetical protein DESPIG_01450 [Desulfovibrio piger ATCC 29098] gi|212673152|gb|EEB33635.1| hypothetical protein DESPIG_01450 [Desulfovibrio piger ATCC 29098] Length = 144 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA+ AA +E+PVGAV V + ++++RA NR L D TAHAEILA+R Sbjct: 1 MRLALDEARQAAREDEVPVGAVLVAADGRLLARAHNRPVALHDPTAHAEILALRAAGAAS 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPC MCAAA+ AR+ + YGA++ G + + T+ +H Sbjct: 61 GNYRLGGGVLVVTLEPCAMCAAALVHARLAGVVYGAADRLAGAVTSCTETLDQPFFNHRV 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ + S ++QDFF RR Sbjct: 121 WHMGGVLARESVDLLQDFFAGRR 143 >gi|325092201|gb|EGC45511.1| tRNA specific adenosine deaminase [Ajellomyces capsulatus H88] Length = 197 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 46/146 (31%), Positives = 74/146 (50%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +K FM AL+ + A E PVG V V N+++I N + + T HAE LAI Sbjct: 15 QKHEYFMKKALDMGEEALASGETPVGCVLVHNDEVIGSGMNDTNKSMNGTRHAEFLAIEE 74 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + I E DLYVT+EPC MCA+A+ +IR +Y+G +N + GG ++ Sbjct: 75 VLRNYPRSIFRETDLYVTVEPCIMCASALRQYQIRHVYFGCANERFGGTGGVLNLHSDPG 134 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147 + G+ + + +++ F+ + Sbjct: 135 IDPPYGLTGGLFRREAIMLLRRFYIQ 160 >gi|258650784|ref|YP_003199940.1| CMP/dCMP deaminase zinc-binding [Nakamurella multipartita DSM 44233] gi|258554009|gb|ACV76951.1| CMP/dCMP deaminase zinc-binding [Nakamurella multipartita DSM 44233] Length = 159 Score = 180 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 51/142 (35%), Positives = 70/142 (49%), Gaps = 1/142 (0%) Query: 9 SCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 AL A+ A ++P+GA V + +I R N D TAHAEILA+R Sbjct: 14 RQALNLARRAPDTGDLPIGALVLDPDGVVIGRGRNAREATGDPTAHAEILALRQAAAARG 73 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 Q L L VT+EPCTMCA A+ LARI + +G PK G + H + Sbjct: 74 QWNLTGCTLAVTVEPCTMCAGAVVLARIETVVFGCWEPKTGAAGSLWDVLRDRRLTHRVQ 133 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ EQ S Q+++ FF + R Sbjct: 134 VRGGVLEQESAQLLRTFFADHR 155 >gi|170755371|ref|YP_001779653.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum B1 str. Okra] gi|169120583|gb|ACA44419.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum B1 str. Okra] Length = 145 Score = 180 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 56/145 (38%), Positives = 80/145 (55%), Gaps = 1/145 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N ++ A+ EA+ A E+PVGA+ V NKII+++ N LKD TAHAEILAI+ C Sbjct: 2 NDYIEYAIIEAEKALAIGEVPVGAIIVKENKIIAKSHNLKESLKDPTAHAEILAIKEACN 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + L +YVTLEPC MCA+AI +RI L+ G +P GG + + + Sbjct: 62 TIHNWRLKGCKMYVTLEPCAMCASAIIQSRISELHIGTFDPVGGACGSVVNITNNSYLKN 121 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + I + + +II +FFK R Sbjct: 122 NLNIKW-LYDDECSRIITNFFKNIR 145 >gi|257066772|ref|YP_003153028.1| CMP/dCMP deaminase zinc-binding [Anaerococcus prevotii DSM 20548] gi|256798652|gb|ACV29307.1| CMP/dCMP deaminase zinc-binding [Anaerococcus prevotii DSM 20548] Length = 180 Score = 180 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 77/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K+ FM+ A+ EA+ A E+PVGAV V + KII R N + K HAE++AI+ Sbjct: 24 KEDYFFMAEAINEARVARFIEEVPVGAVVVYDGKIIGRGHNLTYKGKSALKHAELMAIKE 83 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L E +YVT+EPC+MCA AI +RI RL G + K G + T + Sbjct: 84 ASSWMDDFRLEECTMYVTMEPCSMCAGAIINSRIDRLVVGIRDHKRGACGSNTNVCGDRS 143 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E+ + IQ FF+ R Sbjct: 144 QLHFVDAEFGLMEEEALFEIQTFFRYLR 171 >gi|238061540|ref|ZP_04606249.1| CMP/dCMP deaminase [Micromonospora sp. ATCC 39149] gi|237883351|gb|EEP72179.1| CMP/dCMP deaminase [Micromonospora sp. ATCC 39149] Length = 172 Score = 180 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 47/127 (37%), Positives = 68/127 (53%), Gaps = 1/127 (0%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 +++PVGAV + ++ N D TAHAE+LA+R L + L + L VT Sbjct: 46 ADDVPVGAVIYGPDGTELASGRNERELTGDPTAHAEVLALRRAAERLGRWRLDDCTLVVT 105 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPCTMCA AI LARI + +GA PK G + +H PE+Y G+ E + Sbjct: 106 LEPCTMCAGAIVLARIATVVFGAWEPKTGAAGSLWDVLRDRRLNHRPEVYGGLLEAENSA 165 Query: 140 IIQDFFK 146 +++ FF+ Sbjct: 166 VLRAFFR 172 >gi|325266384|ref|ZP_08133062.1| tRNA-specific adenosine deaminase [Kingella denitrificans ATCC 33394] gi|324982177|gb|EGC17811.1| tRNA-specific adenosine deaminase [Kingella denitrificans ATCC 33394] Length = 241 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 82/149 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ FM AL +A AA E+PVGAV V I+++A NR +V+ HAEILA+ Sbjct: 91 LEEQQKFMQAALVQAALAAEAGEVPVGAVVVHRGNIVAQAYNRCVADCNVSHHAEILALA 150 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++L L E D+YV+LEPC MCA A+ AR+ R+ + AS PK G + + Sbjct: 151 QAGQVLGSYRLNECDVYVSLEPCAMCAGALMQARVARVIFAASEPKTGAAGSVVNLFANK 210 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + G+ ++ I+Q FF+ +R Sbjct: 211 ALNAHTAVSGGVLADEAQAILQQFFQNKR 239 >gi|189220193|ref|YP_001940833.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4] gi|189187051|gb|ACD84236.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4] Length = 173 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 79/149 (53%), Gaps = 3/149 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + FM ALE+A+ A E+PVGAV V +I+ NR +DVTAHAE+ AIR Sbjct: 14 LSRDYYFMGLALEKAKEAFDNGEVPVGAVIVRGEEILGFGRNRVERHRDVTAHAEMEAIR 73 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L LYVT EPC MC A+ L+RI R+ +G S+PK F+T Sbjct: 74 QSQQRVGDWRLDSTTLYVTKEPCLMCWGAVFLSRIERVVFGISDPKQADFCCIKDFFTAR 133 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 PEI PG+ Q S +++ FF R Sbjct: 134 K---KPEILPGVRSQESLELMHQFFFILR 159 >gi|310657417|ref|YP_003935138.1| yaaj [Clostridium sticklandii DSM 519] gi|308824195|emb|CBH20233.1| YaaJ [Clostridium sticklandii] Length = 157 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 56/151 (37%), Positives = 77/151 (50%), Gaps = 6/151 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM AL+EA + NE+P+G V V + +II+RA N + KD HAE++AI+ Sbjct: 1 MMNKEFFMREALKEALKSYSINEVPIGCVIVKDGEIIARAHNNREQNKDPLGHAELIAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L D+YVTLEPC MC+ AI +RI LY GA + K G + + Sbjct: 61 NAAKHLGGWRLVGCDMYVTLEPCIMCSGAIMDSRIENLYIGAIDDKRGCVASYLPILKDR 120 Query: 121 TCHHSP--EIYPGISEQRSRQIIQDFFKERR 149 H+ E I S II+ FF+ R Sbjct: 121 MIPHNVNYEYIQTI----SPYIIKRFFRHLR 147 >gi|160871633|ref|ZP_02061765.1| tRNA-specific adenosine deaminase [Rickettsiella grylli] gi|159120432|gb|EDP45770.1| tRNA-specific adenosine deaminase [Rickettsiella grylli] Length = 160 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 86/148 (58%), Gaps = 2/148 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL +A +A +E+P+GA+ V N+ +I+ A N+ D TAHAEI+ ++ Sbjct: 10 QRDTAYMQLALNQAAHAKRSHEVPIGAILVWNDHVIATAYNQTLTRCDPTAHAEIVVLQE 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L + LYVTLEPC MC A+ ARI+RL +GA + + G I + Q + L Sbjct: 70 TAKQLKNHRLLDATLYVTLEPCLMCVGAMIQARIKRLVFGAYDARLGTIMH--QLHRLKG 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +HS E+ G+ + + ++ FFK +R Sbjct: 128 LNHSFEVAEGVLSEACSKELKQFFKYKR 155 >gi|227824625|ref|ZP_03989457.1| CMP/dCMP deaminase [Acidaminococcus sp. D21] gi|226905124|gb|EEH91042.1| CMP/dCMP deaminase [Acidaminococcus sp. D21] Length = 153 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 56/128 (43%), Positives = 75/128 (58%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 EIPVGA+ V + ++I+R NR D TAHAEIL IR C L + L + LYVT+E Sbjct: 26 GEIPVGAILVQDGRVIARNHNRRERAHDATAHAEILVIREACEKLRRWRLADSTLYVTME 85 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI ARI R+ +GAS+ G + Q + H + I GI +R ++I+ Sbjct: 86 PCPMCAGAIYNARIGRVVFGASDSVAGACGSLFQIPLHPSLHANTIIKAGIEAERCKKIL 145 Query: 142 QDFFKERR 149 Q+FF RR Sbjct: 146 QEFFTRRR 153 >gi|254822445|ref|ZP_05227446.1| hypothetical protein MintA_21101 [Mycobacterium intracellulare ATCC 13950] Length = 152 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 55/151 (36%), Positives = 77/151 (50%), Gaps = 3/151 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M + AL A A R ++P+GAV + + ++RA N L D TAHAEILA+ Sbjct: 1 MIPDEQLIRSALSVAATAGPR-DVPIGAVVISADGTELARAVNAREALGDPTAHAEILAL 59 Query: 60 RMGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 R +L L L VT+EPCTMCA A+ L+RI RL +GA PK G + + Sbjct: 60 RAAAEVLGDGWRLEGATLAVTVEPCTMCAGALVLSRIGRLVFGAWEPKTGAVGSLWDVVR 119 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ Q ++ FF +R Sbjct: 120 DRRLNHRPEVRGGVLAQECAAPLEAFFARQR 150 >gi|116074668|ref|ZP_01471929.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. RS9916] gi|116067890|gb|EAU73643.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. RS9916] Length = 167 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 + +M L+ A+ + E+PV A+ + + I GN +D HAE++AIR Sbjct: 5 DQQRFWMGLLLQRAEAIGRQGEVPVSALVLDGKGRCIGFGGNTRERDQDPLGHAELVAIR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + L VTLEPC MCA A+ AR+ ++ YGA +PK G + Sbjct: 65 QATVLRGDWRLNDCTLLVTLEPCPMCAGALVQARMGQVIYGARDPKRGAMGGTIDLSQHP 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + HH ++ G+ E+ + ++ +F+ RR Sbjct: 125 SAHHHMKVIGGVLEEEASTMLAQWFRLRR 153 >gi|288818013|ref|YP_003432360.1| tRNA-specific adenosine deaminase [Hydrogenobacter thermophilus TK-6] gi|288787412|dbj|BAI69159.1| tRNA-specific adenosine deaminase [Hydrogenobacter thermophilus TK-6] gi|308751614|gb|ADO45097.1| CMP/dCMP deaminase zinc-binding protein [Hydrogenobacter thermophilus TK-6] Length = 149 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 51/145 (35%), Positives = 80/145 (55%), Gaps = 1/145 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 F+ L A+ A R E PVG V V + K+I++A NR ELKD TAHAE+LA+R Sbjct: 2 EKFIELCLNLARRAYERGETPVGCVVVKDGKVIAKAHNRVEELKDPTAHAEMLALREASE 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + L ++YV+LEPC MC A+ L R+ RL + A + + GG+ + HH Sbjct: 62 SMGGKYLYGCEIYVSLEPCVMCTYAMILKRVERLIFLAQDYRHGGVMSMYSLLDDMRFHH 121 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + + ++++++DFF+ R Sbjct: 122 RVRWEY-MPVEEAQKLLRDFFRNLR 145 >gi|251781204|ref|ZP_04824120.1| tRNA-specific adenosine deaminase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243081651|gb|EES47712.1| tRNA-specific adenosine deaminase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 152 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 76/143 (53%), Gaps = 1/143 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ A EEA+ A + E+P+GAV V +N +IS+A N LKD TAHAEILAIR + L Sbjct: 3 FLDIAKEEAKKAMSKGEVPIGAVIVKDNIVISKAHNLKETLKDATAHAEILAIREASKFL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L ++YVTLEPCTMC +AI +RI +L+ G N G + Sbjct: 63 EDWRLNGTEMYVTLEPCTMCTSAIIQSRISKLHIGTFNKDMGACGSIINLIDDRMLESFL 122 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + + ++ ++ FF +R Sbjct: 123 NVNW-LYDEECSNLLMKFFNLKR 144 >gi|254513988|ref|ZP_05126049.1| tRNA-specific adenosine deaminase [gamma proteobacterium NOR5-3] gi|219676231|gb|EED32596.1| tRNA-specific adenosine deaminase [gamma proteobacterium NOR5-3] Length = 150 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M ++FM AL+ AQ AA R E+PVGAV V ++I+ N D TAHAEI A+R Sbjct: 1 MSAHDLFMLRALDLAQEAASRGEVPVGAVVVEGDRILGEGRNAQIASMDPTAHAEINALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ +P LYVTLEPC+MC A+ ARI + + A P+ G + + Sbjct: 61 AASALVKNYRIPGATLYVTLEPCSMCCGALVHARISTVVFAAREPRAGAVVSTRSLLDET 120 Query: 121 TCHHSPEIYPGI-SEQRSRQIIQDFFKERR 149 +H + S +++ FF+ERR Sbjct: 121 AFNHRVAWLEAVEHAPASATLLRSFFRERR 150 >gi|294791140|ref|ZP_06756297.1| tRNA(Ile)-lysidine synthase [Scardovia inopinata F0304] gi|294457611|gb|EFG25965.1| tRNA(Ile)-lysidine synthase [Scardovia inopinata F0304] Length = 152 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A+ +A +EIPVGAV + +++ N E D +HAEI +R R+ Sbjct: 9 MGVALENARKSADFDEIPVGAVVLNSEGAVLAAERNHREEKADPFSHAEIEVMREAARVR 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L VT+EPC MCA AI A + R+ +GA + K G + + P Sbjct: 69 ESWNFEDCTLVVTMEPCPMCAGAIVSAHMGRVVFGAWDEKMGALGSVWDIARDPHVGFRP 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E++ G+ +I+++FF+E+R Sbjct: 129 EVFGGVRADECAEILREFFEEKR 151 >gi|15604662|ref|NP_221180.1| hypothetical protein RP831 [Rickettsia prowazekii str. Madrid E] gi|6226400|sp|Q9ZCC6|Y831_RICPR RecName: Full=Uncharacterized deaminase RP831 gi|3861357|emb|CAA15256.1| unknown [Rickettsia prowazekii] Length = 148 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 65/144 (45%), Positives = 96/144 (66%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL++A+ A +NE+PVG V V N KII + N E K+ HAEI+AI C + Sbjct: 1 MEQALKQARLAFDKNEVPVGVVIVCRLNQKIIVSSHNNIEEKKNPLCHAEIIAINTACNL 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 +S + L + D+YVTLEPC MCA+AIS +R++RL+YGAS+ K G +E+ +++ +C + Sbjct: 61 ISSKNLNDYDIYVTLEPCAMCASAISHSRLKRLFYGASDSKHGAVESNLRYFNSNSCFYR 120 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PEIY GI + SR ++Q+FF+ R Sbjct: 121 PEIYSGILSEHSRFLMQEFFQRIR 144 >gi|313673213|ref|YP_004051324.1| cmp/dcmp deaminase zinc-binding protein [Calditerrivibrio nitroreducens DSM 19672] gi|312939969|gb|ADR19161.1| CMP/dCMP deaminase zinc-binding protein [Calditerrivibrio nitroreducens DSM 19672] Length = 154 Score = 179 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 52/150 (34%), Positives = 85/150 (56%), Gaps = 1/150 (0%) Query: 1 MKK-GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M +FM ++ A+ A +++P+GA+ V++ KII+ NR + K+ HAEI+A+ Sbjct: 1 MDDIDLLFMKKTIQVAKRALKYDDVPIGAIVVMDGKIIASGYNRKKTTKNPLDHAEIIAM 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + R + L LY TLEPC MCA AI RI+R+ +G PK GG+ + + + + Sbjct: 61 KKAARKIGDWRLNNCVLYSTLEPCIMCAGAILHYRIKRVVFGTLEPKFGGVVSNDRIFDI 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 T +H E G E+ + +++DFFK+ R Sbjct: 121 KTLNHRVEYEFGFFEEEIKGMMRDFFKKVR 150 >gi|53719734|ref|YP_108720.1| putative deaminase [Burkholderia pseudomallei K96243] gi|52210148|emb|CAH36126.1| putative deaminase [Burkholderia pseudomallei K96243] Length = 174 Score = 179 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 80/148 (54%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL A+ A E+PVGAV V +++I+R N D +AHAE+ A+R Sbjct: 7 ERDRRYMRLALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L +P +LYVTLEPC MC+ AI ARI R+ +GA +PK G + + A Sbjct: 67 AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 126 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ +++ FF +RR Sbjct: 127 LNHHTTVEGGVLADECGAVLKSFFAQRR 154 >gi|325962140|ref|YP_004240046.1| tRNA-adenosine deaminase [Arthrobacter phenanthrenivorans Sphe3] gi|323468227|gb|ADX71912.1| tRNA-adenosine deaminase [Arthrobacter phenanthrenivorans Sphe3] Length = 157 Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 12/139 (8%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-----------EI 70 ++P+GAV + + ++ N+ EL D TAHAE++AIR L Q Sbjct: 16 DVPIGAVVIGPDGAVLGSGRNQREELGDPTAHAEVVAIREAAERLRQLSLNGGGRGDGWR 75 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130 L + L VTLEPC MCA AI LARI R+ +GA + K G + +H E+YP Sbjct: 76 LSDCTLIVTLEPCAMCAGAIVLARIPRVVFGAWDEKAGAAGSVFDVLRERRLNHWVEVYP 135 Query: 131 GISEQRSRQIIQDFFKERR 149 G+ E ++++FF R Sbjct: 136 GVREAECAALLREFFAGHR 154 >gi|58617315|ref|YP_196514.1| hypothetical protein ERGA_CDS_05880 [Ehrlichia ruminantium str. Gardel] gi|58416927|emb|CAI28040.1| Conserved hypothetical protein (putative cytidine deaminase) [Ehrlichia ruminantium str. Gardel] Length = 145 Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 76/143 (53%), Positives = 95/143 (66%), Gaps = 4/143 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ +AQ E+PVGAV V N K+IS N N + D TAHAEIL+IR C +L Sbjct: 6 YMRLAIGKAQE--DCLEVPVGAVIVYNGKVISCQSNSNIKNCDPTAHAEILSIRHACIVL 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S IL + D+YVTLEPC MCA AIS ARIRRLY+GA N K GGIENG + + CH P Sbjct: 64 STHILNQCDMYVTLEPCAMCAQAISFARIRRLYFGAYNKKYGGIENGARVF--HFCHSVP 121 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GI E+ + +++ DFFK R Sbjct: 122 EVYGGILEEENIRLMTDFFKRLR 144 >gi|198443277|pdb|3DH1|A Chain A, Crystal Structure Of Human Trna-Specific Adenosine-34 Deaminase Subunit Adat2 gi|198443278|pdb|3DH1|B Chain B, Crystal Structure Of Human Trna-Specific Adenosine-34 Deaminase Subunit Adat2 gi|198443279|pdb|3DH1|C Chain C, Crystal Structure Of Human Trna-Specific Adenosine-34 Deaminase Subunit Adat2 gi|198443280|pdb|3DH1|D Chain D, Crystal Structure Of Human Trna-Specific Adenosine-34 Deaminase Subunit Adat2 Length = 189 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 8/155 (5%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 23 MEETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAID 82 Query: 61 MGCRIL------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E+ LYVT+EPC MCAAA+ L +I + YG N + GG + Sbjct: 83 QVLDWCRQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVL 142 Query: 115 QF--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 143 NIASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 177 >gi|255326091|ref|ZP_05367178.1| tRNA-specific adenosine deaminase [Rothia mucilaginosa ATCC 25296] gi|255296802|gb|EET76132.1| tRNA-specific adenosine deaminase [Rothia mucilaginosa ATCC 25296] Length = 158 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 55/148 (37%), Positives = 72/148 (48%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 + + +M AL E A R EIP+GAV V II AGN D +AHAE+ AIR Sbjct: 10 EHSEWMVRALAEGAAAGERGEIPIGAVVVDEQGAIIGSAGNTREREHDPSAHAEVNAIRQ 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 Q L L VT+EPC MCA I +R+ + +GA K G + Sbjct: 70 AAAHRGQWRLDGCTLVVTVEPCLMCAGTILASRVSTVVFGAWEEKTGAAGSRYDVLRDGR 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +PE+Y G+ Q++ DFFKERR Sbjct: 130 VAPAPEVYAGVRADECAQLMVDFFKERR 157 >gi|229492640|ref|ZP_04386443.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis SK121] gi|229320626|gb|EEN86444.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis SK121] Length = 153 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 3/149 (2%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRM 61 + A+ A++A+ ++PVGAV + + ++RA N D TAHAEILA+R Sbjct: 5 DDQRMIRAAIVAARSASDA-DVPVGAVVFDADGVEVARASNAREASSDPTAHAEILALRA 63 Query: 62 GCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L VTLEPCTMCA A+ LAR+ R+ +GA PK G + + Sbjct: 64 AAKTYGDGWRLEGATLAVTLEPCTMCAGALVLARVSRVVFGAWEPKTGAVGSLWDVVRDK 123 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + P++ G+ E +++DFF+E+R Sbjct: 124 RLTYRPQVRGGVLEDECAGLLEDFFREQR 152 >gi|304390572|ref|ZP_07372525.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326328|gb|EFL93573.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 180 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 54/144 (37%), Positives = 75/144 (52%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISR-AGNRN-RELKDVTAHAEILAIRMGCRI 65 + A AQ A +IPVGAV + I++ N+ D +AHAEI+A+R Sbjct: 37 LDTAYRLAQKAGRAGDIPVGAVVLTPEGIVAGLGLNQRENPPYDPSAHAEIVALREAAGR 96 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L L TLEPCTMCA AI ARI RL +GA +PK G + + +H Sbjct: 97 LERWNLKGCTLVATLEPCTMCAGAIVNARISRLIFGAWDPKAGACGSIRDVVRDSRLNHQ 156 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E R + +++ FF ERR Sbjct: 157 VEVKGGVDEPRIKALLKAFFGERR 180 >gi|326335838|ref|ZP_08202017.1| zinc-binding domain protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691982|gb|EGD33942.1| zinc-binding domain protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 145 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 6/149 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM AL+EA+ A + E+PVGA+ +N II++ N L DVTAHAEI AI Sbjct: 1 MLSDTYFMQKALQEAEIAFEQGEVPVGAIITINEIIIAKTHNLTERLGDVTAHAEIQAIT 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L LYVTLEPC MCA A+ ++I ++ Y +++ + G Y Sbjct: 61 SASEYMGGKYLTNCTLYVTLEPCVMCAGALYWSQIGKIVYASTDERRG-----YHLYGN- 114 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI E+ S Q+++ FF+++R Sbjct: 115 LLHPKTEVIHGILEKESSQLLKKFFQQKR 143 >gi|212535962|ref|XP_002148137.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Penicillium marneffei ATCC 18224] gi|210070536|gb|EEA24626.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Penicillium marneffei ATCC 18224] Length = 190 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 46/146 (31%), Positives = 71/146 (48%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL + A E PVG V VL KII N + T HAE LAI Sbjct: 21 EDQEKFMKEALSMGEKALEAGETPVGCVLVLQGKIIGSGMNDTNRSMNGTRHAEFLAIEE 80 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + I VDLYVT+EPC MCA+ + IRR+++G +N + GG + ++ Sbjct: 81 ALQTYPRSIFKHVDLYVTVEPCVMCASLLRQYNIRRVFFGCANERFGGTGSVLSLHSDPC 140 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147 ++ GI + + +++ F+ + Sbjct: 141 IDPRYPVHSGIFKNDAILLLRRFYIQ 166 >gi|257057632|ref|YP_003135464.1| tRNA-adenosine deaminase [Saccharomonospora viridis DSM 43017] gi|256587504|gb|ACU98637.1| tRNA-adenosine deaminase [Saccharomonospora viridis DSM 43017] Length = 147 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%) Query: 9 SCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 AL A+ A ++P+GA V + ++++ A N L D TAHAE+LA+R R+ Sbjct: 5 RVALGFAERAVGTADVPIGAAVFSPDGRLLAGAHNARERLGDPTAHAEVLALREAARVHG 64 Query: 68 Q-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VT+EPCTMCA A+ LAR+ R+ +GA P+ G + + +H P Sbjct: 65 DGWRLEGCTLAVTVEPCTMCAGALVLARVARVVFGAWEPRTGAVCSLWDVVRDRRLNHRP 124 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E ++ DFF ++R Sbjct: 125 EVVGGVLESECAALLNDFFADQR 147 >gi|190890543|ref|YP_001977085.1| cytosine deaminase [Rhizobium etli CIAT 652] gi|190695822|gb|ACE89907.1| cytosine deaminase protein [Rhizobium etli CIAT 652] Length = 145 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 88/142 (61%), Positives = 110/142 (77%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA+ A R E+P+GAV V+++ +SR+GNR REL DVTAHAEI AIR+ C L Sbjct: 1 MEMALEEARAAGERGEVPIGAVVVVDDIAVSRSGNRTRELNDVTAHAEIAAIRLACEALG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 QE L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FYT TCHH+PE Sbjct: 61 QERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYTQPTCHHAPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G +E +S +I++ FF ++R Sbjct: 121 VYSGFNEVQSAEILRTFFLQKR 142 >gi|167894828|ref|ZP_02482230.1| putative deaminase [Burkholderia pseudomallei 7894] Length = 150 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 48/130 (36%), Positives = 71/130 (54%) Query: 20 LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 E+PVGAV V +++I+R N D +AHAE+ A+R R L +P +LYVT Sbjct: 1 AAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVT 60 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MC+ AI ARI R+ +GA +PK G + + A +H + G+ Sbjct: 61 LEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGA 120 Query: 140 IIQDFFKERR 149 +++ FF +RR Sbjct: 121 VLKSFFAQRR 130 >gi|53723703|ref|YP_103157.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei ATCC 23344] gi|52427126|gb|AAU47719.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia mallei ATCC 23344] Length = 162 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 48/128 (37%), Positives = 71/128 (55%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV V +++I+R N D +AHAE+ A+R R L +P +LYVTLE Sbjct: 15 GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 74 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC+ AI ARI R+ +GA +PK G + + A +H + G+ ++ Sbjct: 75 PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 134 Query: 142 QDFFKERR 149 + FF +RR Sbjct: 135 KSFFAQRR 142 >gi|302205290|gb|ADL09632.1| Cytosine/adenosine deaminase [Corynebacterium pseudotuberculosis C231] Length = 182 Score = 178 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 52/144 (36%), Positives = 72/144 (50%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG-CRI 65 M A+ +AQ A +IPVGAV + +++ R NR +D HAEI+AIR Sbjct: 40 MRQAIIQAQ-ATPPGDIPVGAVIFGPDGEVLGRGVNRREADRDPLGHAEIMAIREAVANH 98 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L VTLEPCTMCA A+ ARI R+++GA PK G + H Sbjct: 99 DDGWRLTDCTLAVTLEPCTMCAGALVGARIGRIFFGAYEPKTGACGSAFDVVRDPAVLHV 158 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+ GI + ++ FF+ R Sbjct: 159 PEVRGGILQDECAALVTHFFEGLR 182 >gi|302329844|gb|ADL20038.1| Cytosine/adenosine deaminase [Corynebacterium pseudotuberculosis 1002] Length = 151 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 52/144 (36%), Positives = 72/144 (50%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG-CRI 65 M A+ +AQ A +IPVGAV + +++ R NR +D HAEI+AIR Sbjct: 9 MRQAIIQAQ-ATPPGDIPVGAVIFGPDGEVLGRGVNRREADRDPLGHAEIMAIREAVANH 67 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L VTLEPCTMCA A+ ARI R+++GA PK G + H Sbjct: 68 DDGWRLTDCTLAVTLEPCTMCAGALVGARIGRIFFGAYEPKTGACGSAFDVVRDPAVLHV 127 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+ GI + ++ FF+ R Sbjct: 128 PEVRGGILQDECAALVTHFFEGLR 151 >gi|257438151|ref|ZP_05613906.1| tRNA-specific adenosine deaminase [Faecalibacterium prausnitzii A2-165] gi|257199482|gb|EEU97766.1| tRNA-specific adenosine deaminase [Faecalibacterium prausnitzii A2-165] Length = 162 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 1/126 (0%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV N +II+ A N K+ HAE+LAI C+ L L + +L+VTLEPC Sbjct: 23 VPVGAVVARNGEIIAAAHNTRETEKNALHHAELLAIDAACKKLGGWRLWQCELFVTLEPC 82 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MC+ I +RIRR+ YGA++ K G + T + L +H P + G+ + ++ ++Q Sbjct: 83 PMCSGGIINSRIRRVVYGAADTKAGCCGSVTDLFALP-FNHHPVVERGLRAEEAQALLQA 141 Query: 144 FFKERR 149 FF R Sbjct: 142 FFLRLR 147 >gi|254488088|ref|ZP_05101293.1| tRNA-specific adenosine deaminase [Roseobacter sp. GAI101] gi|214044957|gb|EEB85595.1| tRNA-specific adenosine deaminase [Roseobacter sp. GAI101] Length = 151 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 75/144 (52%), Positives = 99/144 (68%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ ALEEA++AA R E+PVGA V ++++R+GNR REL D TAHAE+LAIR C Sbjct: 6 FMNIALEEARDAAERGEVPVGAAVVSPQGQVVARSGNRTRELNDPTAHAEVLAIRAACAA 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 E L LYVTLEPC MCA AIS AR+ LYYGAS+PK GG+ G + ++ CHH Sbjct: 66 AGSERLGGYALYVTLEPCAMCAGAISAARVATLYYGASDPKSGGVAQGARVFSHPQCHHV 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+Y GI+ ++ +++DFF +R Sbjct: 126 PEVYDGIATAQAEVLLKDFFGGKR 149 >gi|62389126|ref|YP_224528.1| cytosine deaminase [Corynebacterium glutamicum ATCC 13032] gi|41324459|emb|CAF18799.1| PUTATIVE CYTOSINE DEAMINASE [Corynebacterium glutamicum ATCC 13032] Length = 143 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 51/144 (35%), Positives = 73/144 (50%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+ A+ ++PVGAV +I++ A NR +D TAHAEI+A+R R Sbjct: 1 MRHALDIARQ-TPEGDVPVGAVIYAPTGEILATATNRREADRDPTAHAEIIALRRAARRF 59 Query: 67 SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 S L + VTLEPC+MCA A+ ARI R+ +GA P+ G + H Sbjct: 60 SDGWRLSDCTAVVTLEPCSMCAGALVGARIGRIVFGAFEPRTGACGSVFDVVRDPAVLHK 119 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ GI E ++ +FF+ R Sbjct: 120 VEVSGGILEPECAALMTEFFELHR 143 >gi|74317234|ref|YP_314974.1| tRNA-adenosine deaminase [Thiobacillus denitrificans ATCC 25259] gi|74056729|gb|AAZ97169.1| probable cytosine/adenosine deaminases [Thiobacillus denitrificans ATCC 25259] Length = 151 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 47/126 (37%), Positives = 62/126 (49%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGA+ V +I+ R NR D TAHAE++A+R L L LYVT+EPC Sbjct: 17 VPVGALVVCGGEIVGRGYNRPISSFDPTAHAEVMALRDAAARLGNYRLVGCTLYVTMEPC 76 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARI R+ YGA K G + + + E+ G+ I Sbjct: 77 VMCAGAILHARIARVVYGAREYKTGAHGSIVDVFAEPRLNFHCEVEGGVLADECAATISG 136 Query: 144 FFKERR 149 FF+ RR Sbjct: 137 FFEARR 142 >gi|148284933|ref|YP_001249023.1| cytosine deaminase [Orientia tsutsugamushi str. Boryong] gi|146740372|emb|CAM80811.1| cytosine deaminase [Orientia tsutsugamushi str. Boryong] Length = 155 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 63/145 (43%), Positives = 90/145 (62%), Gaps = 2/145 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+E+A A E+PVG V V +++RA N+ + T HAEI+AI C Sbjct: 2 FMLQAIEQASQAFNLGEVPVGVVIVNRATKTVLTRAYNKVETTLNPTFHAEIIAINKACS 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 +LS + L D+YV+LEPC MCAAA+S RI R+++GA + K G IENG + + T ++ Sbjct: 62 LLSCKYLHGYDIYVSLEPCAMCAAALSHVRIDRIFFGAYDEKFGAIENGVRLFYNTTVYY 121 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 PEIY GI E +S++++Q FF R Sbjct: 122 KPEIYGGIMELQSKELLQKFFSNLR 146 >gi|323358758|ref|YP_004225154.1| cytosine/adenosine deaminase [Microbacterium testaceum StLB037] gi|323275129|dbj|BAJ75274.1| cytosine/adenosine deaminase [Microbacterium testaceum StLB037] Length = 183 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 ++PVGAV V + + N D TAHAE++A+R L L L VT Sbjct: 51 EGDVPVGAVVVDASGTVRGEGRNLREATHDPTAHAEVVALRRAAESLGTWHLAGCTLVVT 110 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA A+ AR+ R+ +GA + K G + H E+ G++E + Sbjct: 111 LEPCVMCAGAVLQARVPRVVFGAWDAKAGAAGSMYDVLRDRRLPHRVEVVGGVAEGEAST 170 Query: 140 IIQDFFKERR 149 ++ FF RR Sbjct: 171 RLRAFFDVRR 180 >gi|315657779|ref|ZP_07910659.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491576|gb|EFU81187.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 180 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 54/144 (37%), Positives = 75/144 (52%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISR-AGNRN-RELKDVTAHAEILAIRMGCRI 65 + A AQ A +IPVGAV + I++ N+ D +AHAEI+A+R Sbjct: 37 LDTAYRLAQKAGRAGDIPVGAVVLTPEGIVAGLGLNQRENPPYDPSAHAEIVALREAAGR 96 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L L TLEPCTMCA AI ARI RL +GA +PK G + + +H Sbjct: 97 LERWNLKGCTLVATLEPCTMCAGAIVNARISRLIFGAWDPKAGACGSIRDVVRDSRLNHQ 156 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E R + +++ FF ERR Sbjct: 157 VEVKGGVDEPRVKALLKAFFGERR 180 >gi|296533928|ref|ZP_06896452.1| cytosine deaminase [Roseomonas cervicalis ATCC 49957] gi|296265745|gb|EFH11846.1| cytosine deaminase [Roseomonas cervicalis ATCC 49957] Length = 147 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 65/142 (45%), Positives = 90/142 (63%), Gaps = 1/142 (0%) Query: 9 SCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 AL+EA++AA R E+PVGAV +++ RAGNR + D +AHAE+LA+R L Sbjct: 5 EIALQEARDAAARGEVPVGAVVTDAAGRVLGRAGNRVEQDHDASAHAEMLALRQAAAALG 64 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 LP L VTLEPC MCA A S RIRR+ +GA +PKGGG+E+G + Y +CHH+PE Sbjct: 65 SPRLPGCTLTVTLEPCPMCAQAASFFRIRRVVFGAYDPKGGGVEHGARIYAAPSCHHAPE 124 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + G+ E ++++FF R Sbjct: 125 VVGGVREGECATLLREFFAALR 146 >gi|312200616|ref|YP_004020677.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c] gi|311231952|gb|ADP84807.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c] Length = 198 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++P+GAV + + ++ R N D T HAEI+A+R + + L L VTL Sbjct: 60 GDVPIGAVVIGADGTVLGRGHNIREVAADPTGHAEIVALRAAATAVGEWRLTGATLVVTL 119 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ LAR+ RL YGA + K G + + +H PE+ G++ + Sbjct: 120 EPCTMCAGALVLARVDRLVYGAIDEKAGAVGSLWDVVRDRRLNHRPEVITGVAAPDCTAL 179 Query: 141 IQDFFKERR 149 + FF RR Sbjct: 180 LDTFFASRR 188 >gi|121609574|ref|YP_997381.1| CMP/dCMP deaminase [Verminephrobacter eiseniae EF01-2] gi|121554214|gb|ABM58363.1| CMP/dCMP deaminase, zinc-binding [Verminephrobacter eiseniae EF01-2] Length = 482 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 50/132 (37%), Positives = 72/132 (54%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL +A++AA E+PVGAV V + ++I+ N D +AHAEILA+R Sbjct: 30 DAHWMRQALAQAEDAARAGEVPVGAVVVKDGQLIATGRNAPLARHDPSAHAEILALRAAA 89 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R L L LYVTLEPC MC+ A+ AR+ RL YGA++P+ G + + A + Sbjct: 90 RRLGNYRLDGCSLYVTLEPCAMCSGALLQARLARLVYGAADPRTGAAGSVLDLFGDARLN 149 Query: 124 HSPEIYPGISEQ 135 H + G+ Sbjct: 150 HQTRVQGGVLAD 161 >gi|72160431|ref|YP_288088.1| tRNA-adenosine deaminase [Thermobifida fusca YX] gi|71914163|gb|AAZ54065.1| tRNA-adenosine deaminase [Thermobifida fusca YX] Length = 150 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 74/148 (50%), Gaps = 6/148 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALEEA+ + ++PVGAV + + +I N D TAHAE+LA+R R L Sbjct: 1 MRRALEEAEKTSSSGDVPVGAVVLDPDGVVIGAGHNEREATGDPTAHAEVLALRAAARRL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA AI LARI RL YGA + + G + + +H P Sbjct: 61 GSWRLSGCTLAVTLEPCTMCAGAIVLARIERLIYGARDERAGAVGSLWDVVRDRRLNHRP 120 Query: 127 EIYPGISEQ-----RSRQIIQDFFKERR 149 E+ P +++ DFF R Sbjct: 121 EVIPPDLVDPELSAACSRLLTDFFARHR 148 >gi|154487580|ref|ZP_02028987.1| hypothetical protein BIFADO_01437 [Bifidobacterium adolescentis L2-32] gi|154083709|gb|EDN82754.1| hypothetical protein BIFADO_01437 [Bifidobacterium adolescentis L2-32] Length = 149 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV + + + I R N D AHAE+ A+R L L + L VTL Sbjct: 21 GEVPVGAVVLDADGRAIGRGRNLRETHADPLAHAEVQAMREAAASLGTWNLADCTLVVTL 80 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A + R+ +GA + K G + PE+ G+ E ++ Sbjct: 81 EPCPMCAGACLQTHVGRIVFGAWDAKLGACGSVWDIPRDPHVGPVPEVVGGVCEAECGRL 140 Query: 141 IQDFFKERR 149 + DFF +RR Sbjct: 141 MTDFFADRR 149 >gi|77736501|ref|NP_001029952.1| tRNA-specific adenosine deaminase 2 [Bos taurus] gi|75057795|sp|Q5E9J7|ADAT2_BOVIN RecName: Full=tRNA-specific adenosine deaminase 2; AltName: Full=Deaminase domain-containing protein 1; AltName: Full=tRNA-specific adenosine-34 deaminase subunit ADAT2 gi|59858211|gb|AAX08940.1| deaminase domain containing 1 [Bos taurus] gi|296483948|gb|DAA26063.1| tRNA-specific adenosine deaminase 2 [Bos taurus] Length = 191 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 8/154 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A++ A++A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 20 EETEKWMEQAMQMAKDALDNTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 79 Query: 62 GCRIL------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E+ LYVT+EPC MCAAA+ L RI + YG N + GG + Sbjct: 80 ALDWCRRRGRSPSEVFEHTVLYVTVEPCIMCAAALRLMRIPLVVYGCQNERFGGCGSVLD 139 Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + + PG + + ++++ F+K+ Sbjct: 140 IASADLPSTGKPFQCTPGYRAEEAVEMLKTFYKQ 173 >gi|325191115|emb|CCA25601.1| SUMO ligase putative [Albugo laibachii Nc14] Length = 1298 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 3/149 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM ALEEA+ A +R E+PVG VAV N+IIS A NR EL + T HAE++AI Sbjct: 1111 NKDVGFMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY 1170 Query: 62 GCRILSQEI--LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + E YVT EPC MCAAA+ ++ R+ +G N + GG + + Sbjct: 1171 IVSNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEP 1230 Query: 120 -ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + +PGI + +++Q F+++ Sbjct: 1231 TANIPRTFSCHPGILRIEAIELLQRFYEQ 1259 >gi|325191114|emb|CCA25600.1| SUMO ligase putative [Albugo laibachii Nc14] Length = 1287 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 3/149 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM ALEEA+ A +R E+PVG VAV N+IIS A NR EL + T HAE++AI Sbjct: 1100 NKDVGFMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY 1159 Query: 62 GCRILSQEI--LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + E YVT EPC MCAAA+ ++ R+ +G N + GG + + Sbjct: 1160 IVSNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEP 1219 Query: 120 -ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + +PGI + +++Q F+++ Sbjct: 1220 TANIPRTFSCHPGILRIEAIELLQRFYEQ 1248 >gi|325191111|emb|CCA25597.1| SUMO ligase putative [Albugo laibachii Nc14] Length = 1290 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 3/149 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM ALEEA+ A +R E+PVG VAV N+IIS A NR EL + T HAE++AI Sbjct: 1103 NKDVGFMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY 1162 Query: 62 GCRILSQEI--LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + E YVT EPC MCAAA+ ++ R+ +G N + GG + + Sbjct: 1163 IVSNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEP 1222 Query: 120 -ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + +PGI + +++Q F+++ Sbjct: 1223 TANIPRTFSCHPGILRIEAIELLQRFYEQ 1251 >gi|325191110|emb|CCA25596.1| SUMO ligase putative [Albugo laibachii Nc14] Length = 1279 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 3/149 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM ALEEA+ A +R E+PVG VAV N+IIS A NR EL + T HAE++AI Sbjct: 1092 NKDVGFMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY 1151 Query: 62 GCRILSQEI--LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + E YVT EPC MCAAA+ ++ R+ +G N + GG + + Sbjct: 1152 IVSNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEP 1211 Query: 120 -ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + +PGI + +++Q F+++ Sbjct: 1212 TANIPRTFSCHPGILRIEAIELLQRFYEQ 1240 >gi|325191109|emb|CCA25595.1| SUMO ligase putative [Albugo laibachii Nc14] Length = 1295 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 3/149 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM ALEEA+ A +R E+PVG VAV N+IIS A NR EL + T HAE++AI Sbjct: 1108 NKDVGFMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY 1167 Query: 62 GCRILSQEI--LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + E YVT EPC MCAAA+ ++ R+ +G N + GG + + Sbjct: 1168 IVSNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEP 1227 Query: 120 -ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + +PGI + +++Q F+++ Sbjct: 1228 TANIPRTFSCHPGILRIEAIELLQRFYEQ 1256 >gi|218885276|ref|YP_002434597.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756230|gb|ACL07129.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 175 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 + E+PVGAV V +II N D +AHAE++A+R CR L L VT Sbjct: 46 QGEVPVGAVVVDRQGRIIGTGHNTPVASHDPSAHAEMVALREACRNTGNYRLDGAVLVVT 105 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA A+ AR+ + YGA + K G + + +H + Sbjct: 106 LEPCLMCAGAMVHARVAGVVYGAPDLKAGAVTSCLDALDQPFHNHRVWHMGHVRAAECGA 165 Query: 140 IIQDFFKERR 149 ++Q+FF+ERR Sbjct: 166 LLQEFFRERR 175 >gi|94986787|ref|YP_594720.1| cytosine/adenosine deaminases [Lawsonia intracellularis PHE/MN1-00] gi|94731036|emb|CAJ54399.1| Cytosine/adenosine deaminases [Lawsonia intracellularis PHE/MN1-00] Length = 162 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 55/143 (38%), Positives = 73/143 (51%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA +NE+PVGA+ V N KII + N D TAHAEILA+R + Sbjct: 19 MDEALIEANQCTKKNEVPVGAIIVHKNGKIIGKGHNAPITTSDPTAHAEILALRTAGAVQ 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L + L VTLEPC MC AI ARI + YGA+ G I + + L ++ P Sbjct: 79 QNYRLQDCFLIVTLEPCLMCVGAIIQARIDGIVYGAAELNTGSITSCIAGFDLPFNNYKP 138 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 GI + Q++ +FF + R Sbjct: 139 WHMGGIKATQCSQLLHNFFYKLR 161 >gi|296392969|ref|YP_003657853.1| CMP/dCMP deaminase zinc-binding protein [Segniliparus rotundus DSM 44985] gi|296180116|gb|ADG97022.1| CMP/dCMP deaminase zinc-binding protein [Segniliparus rotundus DSM 44985] Length = 180 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 51/129 (39%), Positives = 70/129 (54%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80 ++PVGAV + K ++RA N D TAHAEILA+R IL L L VTL Sbjct: 37 DVPVGAVVFGPDGKELARAANAREAFGDPTAHAEILALRQAAAILGDGWRLIGCTLAVTL 96 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A ARI R+ +GA PK G + + T +H P++ G+ E ++ Sbjct: 97 EPCTMCAGAAVNARIARIVFGAREPKTGAVGSLWDVVTDPRLNHRPQVRSGVLEAECAEL 156 Query: 141 IQDFFKERR 149 + FF++ R Sbjct: 157 TRSFFRKLR 165 >gi|15616866|ref|NP_240079.1| hypothetical protein BU255 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219682178|ref|YP_002468562.1| tRNA-specific adenosine deaminase monomer (YfhC) [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|14286004|sp|P57343|Y255_BUCAI RecName: Full=Uncharacterized protein BU255 gi|25303863|pir||E84959 hypothetical protein yfhC [imported] - Buchnera sp. (strain APS) gi|10038930|dbj|BAB12965.1| hypothetical protein yfhC [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219621911|gb|ACL30067.1| tRNA-specific adenosine deaminase monomer (YfhC) [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086568|gb|ADP66649.1| tRNA-specific adenosine deaminase monomer (YfhC) [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087149|gb|ADP67229.1| tRNA-specific adenosine deaminase monomer (YfhC) [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087683|gb|ADP67762.1| tRNA-specific adenosine deaminase monomer (YfhC) [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 161 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 8/152 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +K +M AL+ A A + EIP+GA+ V +II N + D TAHAEI+A+R Sbjct: 4 EKDKNWMKIALKYAYYAKEKGEIPIGAILVFKERIIGIGWNSSISKNDPTAHAEIIALRG 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA----SNPKGGGIENGTQFY 117 + + L LYVTL+PC MC AI +RI+RL +GA S+ + + + Sbjct: 64 AGKKIKNYRLLNTTLYVTLQPCIMCCGAIIQSRIKRLVFGANCNSSDHRF----SLKNLF 119 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +I + ++ I+ +FF+++R Sbjct: 120 CDPQKDYKLDIKKNVMQRECSDILINFFQKKR 151 >gi|146321900|ref|YP_001201611.1| cytosine/adenosine deaminase [Streptococcus suis 98HAH33] gi|145692706|gb|ABP93211.1| Cytosine/adenosine deaminase [Streptococcus suis 98HAH33] Length = 141 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 45/120 (37%), Positives = 65/120 (54%) Query: 30 AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAA 89 V + +II R N EL HAE++AI+ + L + L+VT+EPC MC+ A Sbjct: 2 IVKDGQIIGRGHNAREELNQAIMHAEVMAIQEANNVEGNWRLLDSTLFVTIEPCVMCSGA 61 Query: 90 ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 I LARI ++ YGA+N K G + T +H ++ GI E I+QDFF++RR Sbjct: 62 IGLARIPQVIYGATNKKFGAAGSLYDILTDERLNHRVKVETGILEAECANIMQDFFRQRR 121 >gi|170746522|ref|YP_001752782.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM 2831] gi|170653044|gb|ACB22099.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM 2831] Length = 162 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 68/115 (59%), Positives = 82/115 (71%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGA V + +++ A NR REL D TAHAEILAIR C L E L DLYVTLE Sbjct: 34 GEVPVGAAVVRDGTVLAVAHNRPRELHDPTAHAEILAIRAACATLGTERLVGCDLYVTLE 93 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136 PC MCA AIS ARIRRLYYGA++PKGGG+E+G + + TCHH+PE+Y G E+ Sbjct: 94 PCPMCAGAISFARIRRLYYGAADPKGGGVEHGPRVFDQPTCHHAPEVYGGFRERE 148 >gi|162450858|ref|YP_001613225.1| putative zinc-binding hydrolase [Sorangium cellulosum 'So ce 56'] gi|161161440|emb|CAN92745.1| putative zinc-binding hydrolase [Sorangium cellulosum 'So ce 56'] Length = 177 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 50/147 (34%), Positives = 73/147 (49%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL EA+ AA ++PVGA+ V +++R NR +D T HAE+ A+R Sbjct: 25 DARWMREALAEAEAAAGAGDVPVGALVVDAAGTVLARGRNRREIDQDPTGHAEVDALRAA 84 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L L +Y TLEPC MCA A+ ARI RL YG +PK G ++ Sbjct: 85 ARRLGHWRLEGATVYATLEPCPMCAGALVNARIARLVYGCPDPKAGAVDTLFAIGRDNRL 144 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ +++ FF + R Sbjct: 145 NHRFAVTSGVLADECAGVLRAFFAKLR 171 >gi|319784273|ref|YP_004143749.1| CMP/dCMP deaminase zinc-binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170161|gb|ADV13699.1| CMP/dCMP deaminase zinc-binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 149 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 73/129 (56%), Positives = 93/129 (72%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 R E+PVGAV +++ AGNR REL D TAHAE+L IR CR LS E L DLYVTL Sbjct: 20 RGEVPVGAVIANGAGVVASAGNRTRELADPTAHAEMLVIREACRKLSAERLTGHDLYVTL 79 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA AIS AR+RRLY+GA++ KGG + NG +F+ TCHH+P+IYPG+ E + + Sbjct: 80 EPCAMCAGAISFARLRRLYFGAADDKGGAVVNGVRFFASPTCHHAPDIYPGMGETEAGLL 139 Query: 141 IQDFFKERR 149 ++ FF+ERR Sbjct: 140 LKGFFRERR 148 >gi|172041612|ref|YP_001801326.1| putative cytosine/adenosine deaminase [Corynebacterium urealyticum DSM 7109] gi|171852916|emb|CAQ05892.1| putative cytosine/adenosine deaminase [Corynebacterium urealyticum DSM 7109] Length = 198 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 4/148 (2%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 M A++ A + ++PVGA+ V + +++ A NR + D AHAE+LA+R Sbjct: 53 DEELMRQAIDVA-CSTPPGDVPVGALVVDADGTVLATATNRREQDADPLAHAEVLALRQA 111 Query: 63 CRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L L L VTLEPC MCA A AR+ R+ +GA P+ G + A Sbjct: 112 VRALGDSWRLERCTLVVTLEPCAMCAGAALGARVGRIVFGAYEPRTGACGSVWDLPREAL 171 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ + Q+++ FF++ R Sbjct: 172 L-HKAEVRGGVLQPECEQLLRGFFEKLR 198 >gi|145592768|ref|YP_001157065.1| CMP/dCMP deaminase, zinc-binding [Salinispora tropica CNB-440] gi|145302105|gb|ABP52687.1| tRNA-adenosine deaminase [Salinispora tropica CNB-440] Length = 153 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 51/153 (33%), Positives = 74/153 (48%), Gaps = 14/153 (9%) Query: 8 MSCALEEAQNAAL-------------RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAH 53 M ALE A A ++IPVGA+ + + ++ N D TAH Sbjct: 1 MRRALEVAVTGAETTITAADDIPVPAADDIPVGALLLGPDGAELATGRNERELTGDPTAH 60 Query: 54 AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 AE+LA+R L + L L VTLEPCTMCA A+ LAR+ + +GA PK G + Sbjct: 61 AEVLALRRAAGRLGRWRLDGCTLVVTLEPCTMCAGALVLARVSTVVFGAWEPKTGAAGSL 120 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 +H PE+Y G+ E + +++ FF+ Sbjct: 121 WDVLRDRRLNHRPEVYGGVLETETAAVLRAFFR 153 >gi|298345726|ref|YP_003718413.1| nucleoside deaminase [Mobiluncus curtisii ATCC 43063] gi|298235787|gb|ADI66919.1| nucleoside deaminase [Mobiluncus curtisii ATCC 43063] Length = 180 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 54/144 (37%), Positives = 75/144 (52%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISR-AGNRN-RELKDVTAHAEILAIRMGCRI 65 + A AQ A +IPVGAV + I++ N+ D +AHAEI+A+R Sbjct: 37 LDTAYGLAQKAGRAGDIPVGAVVLTPEGIVAGLGLNQRENPPYDPSAHAEIVALREAAGR 96 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L L TLEPCTMCA AI ARI RL +GA +PK G + + +H Sbjct: 97 LERWNLKGCTLVATLEPCTMCAGAIVNARISRLIFGAWDPKAGACGSIRDVVRDSRLNHQ 156 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E R + +++ FF ERR Sbjct: 157 VEVKGGVDEPRIKALLKAFFGERR 180 >gi|21672527|ref|NP_660594.1| hypothetical protein BUsg246 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25091621|sp|Q8K9R4|Y246_BUCAP RecName: Full=Uncharacterized protein BUsg_246 gi|21623150|gb|AAM67805.1| hypothetical 20.0 kDa protein [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 151 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 72/148 (48%), Gaps = 1/148 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + +M AL+ A A E+P+GA+ V KII N D TAHAEI+A+R Sbjct: 4 NRDSYWMKIALKYAYYAEENGEVPIGAILVFQEKIIGTGWNSVISQNDSTAHAEIIALRE 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + L LYVTL+PC MC AI +RI+RL +GAS + + Sbjct: 64 AGRNIKNYRLVNTTLYVTLQPCMMCCGAIINSRIKRLVFGASYKDLKKNPFLKKIFINLE 123 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +I I +I+ +FFK +R Sbjct: 124 KN-KLKIKKHIMRNECAKILSNFFKNKR 150 >gi|300790762|ref|YP_003771053.1| cytidine and deoxycytidylate deaminase family protein [Amycolatopsis mediterranei U32] gi|299800276|gb|ADJ50651.1| cytidine and deoxycytidylate deaminase family protein [Amycolatopsis mediterranei U32] Length = 142 Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 54/144 (37%), Positives = 78/144 (54%), Gaps = 4/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A+ ++P+GAV + + ++ A N EL D TAHAEILA+R +++ Sbjct: 1 MEAALEAARAPGA--DVPIGAVVFGPDGVPLAAARNARIELGDPTAHAEILALRAAAQVV 58 Query: 67 SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L VTLEPCTMCA A+ LARI RL +GA PK G + + +H Sbjct: 59 GDGWRLEGCTLAVTLEPCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVRDRRLNHR 118 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE++ G+ +++ +F RR Sbjct: 119 PEVHGGVLLDECAGLLETYFAMRR 142 >gi|318062198|ref|ZP_07980919.1| cytidine/deoxycytidine deaminase [Streptomyces sp. SA3_actG] gi|318079391|ref|ZP_07986723.1| cytidine/deoxycytidine deaminase [Streptomyces sp. SA3_actF] Length = 163 Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 46/129 (35%), Positives = 66/129 (51%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 EIPVGAV + + ++RA N D TAHAE+LA+R + + L L VTL Sbjct: 35 GEIPVGAVVLDASGTELARARNEREATHDPTAHAEVLALRRAAAVRGEWRLTGCTLVVTL 94 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A++ +R+ R+ YGA +PK G + +H E+ G+ S + Sbjct: 95 EPCPMCAGALTQSRVERVVYGARDPKAGAAGSQWDLLRDRRLNHRAEVVEGVLAPESTAL 154 Query: 141 IQDFFKERR 149 + FF R Sbjct: 155 LDAFFTATR 163 >gi|332982859|ref|YP_004464300.1| tRNA-adenosine deaminase [Mahella australiensis 50-1 BON] gi|332700537|gb|AEE97478.1| tRNA-adenosine deaminase [Mahella australiensis 50-1 BON] Length = 156 Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 50/126 (39%), Positives = 68/126 (53%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +P+GAV ++II R N+ L D TAHAE+LAIR ++ L +LY TLEPC Sbjct: 28 VPIGAVVAKGDEIIGRGHNQVEGLHDATAHAEMLAIRQAMAAINDWRLDGCELYTTLEPC 87 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MC A+ L RI +L YGA + K G + EI GI EQR ++++ Sbjct: 88 AMCTGAMMLCRIEQLIYGAPDLKWGCAGTLYNLPRDRRFDRNIEIIAGIGEQRCEEMLKK 147 Query: 144 FFKERR 149 FF+ RR Sbjct: 148 FFENRR 153 >gi|300857552|ref|YP_003782535.1| hypothetical protein cpfrc_00135 [Corynebacterium pseudotuberculosis FRC41] gi|300685006|gb|ADK27928.1| hypothetical protein cpfrc_00135 [Corynebacterium pseudotuberculosis FRC41] gi|308275531|gb|ADO25430.1| Cytosine/adenosine deaminase [Corynebacterium pseudotuberculosis I19] Length = 167 Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 52/144 (36%), Positives = 72/144 (50%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG-CRI 65 M A+ +AQ A +IPVGAV + +++ R NR +D HAEI+AIR Sbjct: 25 MRQAIIQAQ-ATPPGDIPVGAVIFGPDGEVLGRGVNRREADRDPLGHAEIMAIREAVANH 83 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L VTLEPCTMCA A+ ARI R+++GA PK G + H Sbjct: 84 DDGWRLTDCTLAVTLEPCTMCAGALVGARIGRIFFGAYEPKTGACGSAFDVVRDPAVLHV 143 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+ GI + ++ FF+ R Sbjct: 144 PEVRGGILQDECAALVTHFFEGLR 167 >gi|257138794|ref|ZP_05587056.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia thailandensis E264] Length = 187 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL A+ A E+PVGAV V +++I+R N D +AHAE+ A+R Sbjct: 20 ERDRRYMRIALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 79 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L +P +LYVTLEPC MC+ AI ARI R+ +GA +PK G + + A Sbjct: 80 AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 139 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ FF ERR Sbjct: 140 LNHHTTVEGGVLADECGAALKSFFAERR 167 >gi|83719984|ref|YP_442586.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia thailandensis E264] gi|83653809|gb|ABC37872.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia thailandensis E264] Length = 194 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL A+ A E+PVGAV V +++I+R N D +AHAE+ A+R Sbjct: 27 ERDRRYMRIALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 86 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L +P +LYVTLEPC MC+ AI ARI R+ +GA +PK G + + A Sbjct: 87 AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 146 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ FF ERR Sbjct: 147 LNHHTTVEGGVLADECGAALKSFFAERR 174 >gi|242794450|ref|XP_002482376.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500] gi|218718964|gb|EED18384.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500] Length = 186 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 48/146 (32%), Positives = 73/146 (50%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL + A E PVG V VLN KII N + T HAE LAI Sbjct: 17 QDQERFMKEALLMGEKALAVGETPVGCVLVLNGKIIGSGMNDTNRSMNGTRHAEFLAIEE 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + I EVDLYVT+EPC MCA+ + I R+++G +N + GG + ++ + Sbjct: 77 ALQTYPRSIFREVDLYVTVEPCVMCASLLRQYNICRVFFGCANERFGGTGSVLSLHSDPS 136 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147 +Y GI + + +++ F+ + Sbjct: 137 IDPPYPVYGGIFKNDAIMLLRRFYIQ 162 >gi|167619629|ref|ZP_02388260.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia thailandensis Bt4] Length = 194 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL A+ A E+PVGAV V +++I+R N D +AHAE+ A+R Sbjct: 27 ERDRRYMRIALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 86 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L +P +LYVTLEPC MC+ AI ARI R+ +GA +PK G + + A Sbjct: 87 AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 146 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ FF ERR Sbjct: 147 LNHHTTVEGGVLADECGAALKSFFAERR 174 >gi|115727549|ref|XP_789050.2| PREDICTED: similar to deaminase domain containing 1 [Strongylocentrotus purpuratus] gi|115955250|ref|XP_001190121.1| PREDICTED: similar to deaminase domain containing 1 [Strongylocentrotus purpuratus] Length = 201 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 8/151 (5%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M+ A+ A+ A R E+PVG + V ++II GN E K+ T HAEILA+ Sbjct: 9 DEKWMTEAVNMAKQALGRGEVPVGCLLVYEDQIIGTGGNAVNETKNATRHAEILALEEAM 68 Query: 64 RILSQEIL------PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 R + L L+VT+EPC MCA A+ + I+++ YG N + GG + Sbjct: 69 RWCDDKQLEREEVFSRTKLFVTVEPCIMCAGALRIMGIKKVVYGCRNERFGGCGSILSVN 128 Query: 118 TL--ATCHHSPEIYPGISEQRSRQIIQDFFK 146 + + E G+ + Q++Q+F+K Sbjct: 129 SDELPSIGEPFECKAGLYADTAVQLLQEFYK 159 >gi|332671974|ref|YP_004454982.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas fimi ATCC 484] gi|332341012|gb|AEE47595.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas fimi ATCC 484] Length = 171 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 15/150 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL--------NNKIISRAGNRNRELKDVTAHAEILAI 59 M AL+EA+ A ++ + ++++R N L D T HAE++A+ Sbjct: 20 MGLALDEARRAVQSGDV-------PVGAVVVGPSGEVVARGHNVREALDDPTGHAEVVAL 72 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R L + L + L VTLEPC MCA AI LAR+ RL GA +PK G + Sbjct: 73 RAAADRLGRWRLDDCTLVVTLEPCLMCAGAIVLARVPRLVLGAWDPKAGACGSQWDVVRD 132 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ ++Q FF+ +R Sbjct: 133 RRLNHRVEVVGGVRADECGLLLQHFFEAQR 162 >gi|219681621|ref|YP_002468007.1| hypothetical protein YfhC [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471309|ref|ZP_05635308.1| hypothetical protein BaphL_01255 [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|219624464|gb|ACL30619.1| hypothetical protein YfhC [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 161 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 8/152 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +K +M AL+ A A + EIP+GA+ V +II N + D TAHAEI+A+R Sbjct: 4 EKDKNWMKIALKYAYYAKEKGEIPIGAILVFKERIIGIGWNSSISKNDPTAHAEIIALRG 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA----SNPKGGGIENGTQFY 117 + + L LYVTL+PC MC AI +RI+RL +GA S+ + + + Sbjct: 64 AGKKIKNYRLLNTTLYVTLQPCIMCCGAIIQSRIKRLVFGANCNSSDHRF----SLKNLF 119 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +I + ++ I+ +FF+++R Sbjct: 120 CNPQKDYKLDIKKNVMQRECSDILINFFQKKR 151 >gi|296141715|ref|YP_003648958.1| CMP/dCMP deaminase zinc-binding protein [Tsukamurella paurometabola DSM 20162] gi|296029849|gb|ADG80619.1| CMP/dCMP deaminase zinc-binding protein [Tsukamurella paurometabola DSM 20162] Length = 144 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 56/144 (38%), Positives = 73/144 (50%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC-RI 65 M ALE A + +++PVGAV + + +++RAGNR L D TAHAE+LAIR R Sbjct: 1 MGLALEAAGLSG-PDDVPVGAVILDPDGVVLARAGNRREALADPTAHAEVLAIREAATRF 59 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L VTLEPC MCA A+ ARI RL +GA PK G + + H Sbjct: 60 GDGWRLGGCTLAVTLEPCAMCAGALVSARIERLVFGAYEPKTGAVGSVWDVVRDPRVTHR 119 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + GI ++ DFF R Sbjct: 120 VSVRGGIRAGECGALLTDFFAPHR 143 >gi|297205021|ref|ZP_06922417.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii JV-V16] gi|297149599|gb|EFH29896.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii JV-V16] Length = 174 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 50/149 (33%), Positives = 83/149 (55%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M A EA+ A ++E+P+GA+ V ++I R NR T HAEILAI Sbjct: 5 EEKKHYMELAFAEAKKAEAQDEVPIGAIVVDPKGQVIGRGYNRRELDNVATHHAEILAIN 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L+ L + L+VTLEPC MCA AI AR++ ++YGA + K G + + + Sbjct: 65 EACKTLNSWRLIDCSLFVTLEPCAMCAGAIINARLKEVFYGAPDHKAGASGSVVDLFAVE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P++ G+ ++ ++ +FF+ R Sbjct: 125 KFNHHPQVIRGLYRDKASSMLTNFFRTIR 153 >gi|226363496|ref|YP_002781278.1| tRNA-specific adenosine deaminase [Rhodococcus opacus B4] gi|226241985|dbj|BAH52333.1| putative tRNA-specific adenosine deaminase [Rhodococcus opacus B4] Length = 152 Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 53/129 (41%), Positives = 73/129 (56%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80 ++PVGAV + + +SRA N + D TAHAEI+A+R R+ L L VTL Sbjct: 24 DVPVGAVVFDADGVEVSRAVNSREAMADPTAHAEIIALRAAARVYGDGWRLEGATLAVTL 83 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ LARI R+ +GA PK G + + H P++ G+ E I Sbjct: 84 EPCTMCAGALVLARISRVVFGAWEPKTGAVGSLWDVVRDRRLTHRPQVRGGVLEDECAGI 143 Query: 141 IQDFFKERR 149 ++DFF+ERR Sbjct: 144 LEDFFRERR 152 >gi|317123562|ref|YP_004097674.1| tRNA-adenosine deaminase [Intrasporangium calvum DSM 43043] gi|315587650|gb|ADU46947.1| tRNA-adenosine deaminase [Intrasporangium calvum DSM 43043] Length = 190 Score = 176 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 +++PVGAV + + +I R N EL D T HAE++A+R + L L VTL Sbjct: 37 DDVPVGAVVIGSDGLVIGRGRNVREELGDPTGHAEVIALRSAAAAVGTWRLDGATLAVTL 96 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A AR+ R+ +GA +PK G + H ++ G+ + + + Sbjct: 97 EPCVMCAGAAIAARVERIVFGAWDPKAGACGSVWDLTRDPLATHRADVVGGVRAEEAATL 156 Query: 141 IQDFFKERR 149 + DFF+ RR Sbjct: 157 LVDFFERRR 165 >gi|315654318|ref|ZP_07907226.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii ATCC 51333] gi|315491353|gb|EFU80970.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii ATCC 51333] Length = 180 Score = 176 bits (448), Expect = 9e-43, Method: Composition-based stats. Identities = 54/144 (37%), Positives = 75/144 (52%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISR-AGNRN-RELKDVTAHAEILAIRMGCRI 65 + A AQ A +IPVGAV + I++ N+ D +AHAEI+A+R Sbjct: 37 LETAYGLAQKAGRAGDIPVGAVVLTPEGIVAGLGLNQRENPPYDPSAHAEIVALREAAGR 96 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L L TLEPCTMCA AI ARI RL +GA +PK G + + +H Sbjct: 97 LERWNLKGCTLVATLEPCTMCAGAIVNARISRLIFGAWDPKAGACGSIRDVVRDSRLNHQ 156 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E R + +++ FF ERR Sbjct: 157 VEVKGGVDEPRVKALLKAFFGERR 180 >gi|294678027|ref|YP_003578642.1| tRNA-specific adenosine deaminase [Rhodobacter capsulatus SB 1003] gi|294476847|gb|ADE86235.1| tRNA-specific adenosine deaminase [Rhodobacter capsulatus SB 1003] Length = 149 Score = 176 bits (448), Expect = 9e-43, Method: Composition-based stats. Identities = 72/130 (55%), Positives = 92/130 (70%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+PVGAV V + ++I+RAGNR REL D TAHAEILAIR C L E L DLYVT Sbjct: 20 RGEVPVGAVIVAPDGRVIARAGNRTRELNDPTAHAEILAIRAACAALGSERLAGHDLYVT 79 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCAAA++ ARI RLYYGA +PK GG+ G + + CHH PE+Y GI+ + + + Sbjct: 80 LEPCPMCAAALANARIARLYYGAGDPKSGGVAQGPRIFAHPQCHHVPEVYDGIAAEPAEK 139 Query: 140 IIQDFFKERR 149 ++++FF RR Sbjct: 140 LLKEFFAARR 149 >gi|239815773|ref|YP_002944683.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110] gi|239802350|gb|ACS19417.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110] Length = 369 Score = 176 bits (448), Expect = 9e-43, Method: Composition-based stats. Identities = 45/126 (35%), Positives = 68/126 (53%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V N + ++ N D +AHAEI A+R G L L +L+VTLEPC Sbjct: 32 VPVGAVLVRNGQFVASGRNTPVAQHDPSAHAEINALRAGAAALGNYRLDGCELFVTLEPC 91 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA A+ AR+ R+ +GA++PK G + + +H ++ G+ ++Q Sbjct: 92 AMCAGAMLHARLARVVFGAADPKTGAAGSVLDLFAEPRLNHRTQVQGGVLAAECSALLQG 151 Query: 144 FFKERR 149 FF+ RR Sbjct: 152 FFQLRR 157 >gi|94266763|ref|ZP_01290431.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta proteobacterium MLMS-1] gi|94270234|ref|ZP_01291686.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta proteobacterium MLMS-1] gi|93450891|gb|EAT01904.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta proteobacterium MLMS-1] gi|93452585|gb|EAT03162.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta proteobacterium MLMS-1] Length = 156 Score = 176 bits (448), Expect = 9e-43, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ AL EA AA R E+PVGA+ V + ++ GNR E D AHAEI+ +R Sbjct: 7 DQQYMALALAEAARAAERGEVPVGALLVAADATVLVADGNRTIEYCDPAAHAEIVVLRRA 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +L+ LP LYVTLEPC MCA A+ ARI RL YGA++PK G I++ Q + Sbjct: 67 AALLANHRLPGATLYVTLEPCVMCAGALIQARIERLVYGAADPKAGAIDSLFQLAADSRL 126 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + +++DFF+++R Sbjct: 127 NHRFEVDSGVLAEECGLLLRDFFRQKR 153 >gi|124025482|ref|YP_001014598.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. NATL1A] gi|123960550|gb|ABM75333.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. NATL1A] Length = 155 Score = 176 bits (448), Expect = 9e-43, Method: Composition-based stats. Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ L +A+ R E+P+ AV + + I GNR +KD HAE++A+R I Sbjct: 1 MTRLLTKARLVGERGEVPIAAVILDKKGRCIGYGGNRRESMKDPLGHAELVALRQASWIK 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + + L V LEPC MCA A+ AR+ ++ YG+ +PK G + + HH Sbjct: 61 NDWRFNDCTLIVNLEPCPMCAGALIQARMGKIIYGSEDPKRGALGGTINLAEHKSAHHRL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI E+ S++II D+FK++R Sbjct: 121 LIEKGIMEEESKKIIVDWFKDKR 143 >gi|169627373|ref|YP_001701022.1| cytidine/deoxycytidylate deaminase family protein [Mycobacterium abscessus ATCC 19977] gi|169239340|emb|CAM60368.1| Cytidine/deoxycytidylate deaminase family protein [Mycobacterium abscessus] Length = 152 Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats. Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 3/149 (2%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 + AL A+ A + ++P+GAV + ++RA N L D TAHAE+LA+R Sbjct: 5 DDEALIRAALVAAREAGSQ-DVPIGAVIYAADGTELARAANARERLGDPTAHAEVLALRA 63 Query: 62 GCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L VT+EPCTMCA A+ LAR+ R+ +GA PK G + + Sbjct: 64 AAAKHGDGWRLEGATLAVTVEPCTMCAGALVLARVGRVVFGAWEPKTGAVGSLWDVVRDR 123 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H PE+ G+ E +++ FF +R Sbjct: 124 RQAHRPEVRGGVLEHECAALLERFFAAKR 152 >gi|331694222|ref|YP_004330461.1| CMP/dCMP deaminase zinc-binding protein [Pseudonocardia dioxanivorans CB1190] gi|326948911|gb|AEA22608.1| CMP/dCMP deaminase zinc-binding protein [Pseudonocardia dioxanivorans CB1190] Length = 153 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 77/148 (52%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 + A++ A+ A ++P+GAV V + ++ A N L D TAHAEILA+R Sbjct: 6 DDERLVRRAIDVARGALGTGDVPIGAVVVDASGAEVATACNAREALGDPTAHAEILALRA 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 +L + L L VTLEPCTMCA AI LAR+ R+ +GA P+ G + Sbjct: 66 AAAVLGEWRLTGCTLVVTLEPCTMCAGAIWLARVPRVVFGAWEPRTGAAGSLWDVLRDRR 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ +++DFF E R Sbjct: 126 LNHRPEVVGGVLADECAALLEDFFGELR 153 >gi|88703683|ref|ZP_01101399.1| Cytidine and deoxycytidylate deaminase [Congregibacter litoralis KT71] gi|88702397|gb|EAQ99500.1| Cytidine and deoxycytidylate deaminase [Congregibacter litoralis KT71] Length = 167 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 51/144 (35%), Positives = 74/144 (51%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM+ AL+ A+ AA E+PVGA+ V + +I+ N D TAHAEI A+R L Sbjct: 24 FMARALQLAKEAAEAGEVPVGALVVQDGRILGEGRNAQIGATDPTAHAEINALRAAASAL 83 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 +P LYVTLEPC+MC A+ ARI L + A P+ G + + + +H Sbjct: 84 DNYRMPGATLYVTLEPCSMCCGALVHARIGSLVFAAREPRAGAVVSTRNLLNESAFNHRV 143 Query: 127 EIYPGI-SEQRSRQIIQDFFKERR 149 + S +++ FF+ERR Sbjct: 144 SWREDAENAPASAALLRAFFRERR 167 >gi|238508831|ref|XP_002385598.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357] gi|317157687|ref|XP_001826520.2| cytidine and deoxycytidylate deaminase zinc-binding domain protein [Aspergillus oryzae RIB40] gi|220688490|gb|EED44843.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357] Length = 174 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 3/150 (2%) Query: 1 MKKGN---VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M++ + FM AL + A E PVG V V +N+I+S N + T HAE + Sbjct: 1 MEEDSRHAYFMKQALLMGEKALETGETPVGCVLVYDNQIVSSGMNDTNRSMNGTRHAEFI 60 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 A+ R + +L LYVT+EPC MCA+A+ RI+ +Y+G SN + GG + + Sbjct: 61 ALERMLRNYPKSLLRSTKLYVTVEPCVMCASALRQYRIQAVYFGCSNERFGGTGSILSLH 120 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 T + +Y G+ + + +++ F+ + Sbjct: 121 TDFSIDPPYPVYGGLFSKEAVMLLRRFYIQ 150 >gi|167836996|ref|ZP_02463879.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia thailandensis MSMB43] Length = 194 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 79/148 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL A+ A E+PVGAV V +++I+R N D +AHAE+ A+R Sbjct: 27 ERDRRYMRIALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 86 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L +P +LYVTLEPC MC+ AI ARI R+ +GA +PK G + + A Sbjct: 87 AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 146 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ FF ERR Sbjct: 147 LNHHTTVEGGVLADECGAALKSFFAERR 174 >gi|27904732|ref|NP_777858.1| putative deaminase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|38372581|sp|Q89AM8|Y236_BUCBP RecName: Full=Uncharacterized protein bbp_236 gi|27904129|gb|AAO26963.1| putative deaminase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 162 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 70/148 (47%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM CA+ A+ + + E+PVGAV V NN II + N + D TAHAEI A+R Sbjct: 3 DSDKYFMKCAIFLAKISEMIGEVPVGAVLVFNNTIIGKGLNSSILNHDPTAHAEIKALRN 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G + L L LYVTLEPC MC AI +RI RL +GA + + Sbjct: 63 GAKFLKNYRLLHTTLYVTLEPCIMCYGAIIHSRISRLVFGAKYKNLQKYICCKNHFFINK 122 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 I + E ++ FFK +R Sbjct: 123 NFRKISITQEVLESECSNLLSSFFKRKR 150 >gi|209544158|ref|YP_002276387.1| CMP/dCMP deaminase [Gluconacetobacter diazotrophicus PAl 5] gi|209531835|gb|ACI51772.1| CMP/dCMP deaminase zinc-binding [Gluconacetobacter diazotrophicus PAl 5] Length = 178 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV + + I++RAGN+ D AHAE+L +R RIL L L VTL Sbjct: 29 GEVPVGAVLLGPDGTILARAGNQVEAGHDAAAHAEMLVMRAAARILGSPRLTGCTLVVTL 88 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCAAA R+ R+ +GA +PKGGG+E+G + C H PE G+ E+ + + Sbjct: 89 EPCPMCAAASVHFRVGRIVFGAYDPKGGGVEHGPRLLARPDCLHRPEWVGGVREREAAAL 148 Query: 141 IQDFFKERR 149 ++DFF R Sbjct: 149 LRDFFAALR 157 >gi|227549638|ref|ZP_03979687.1| nucleoside deaminase [Corynebacterium lipophiloflavum DSM 44291] gi|227078294|gb|EEI16257.1| nucleoside deaminase [Corynebacterium lipophiloflavum DSM 44291] Length = 177 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 52/143 (36%), Positives = 71/143 (49%), Gaps = 2/143 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ ALE A+ ++PVGAV + + NR D TAHAE+ A+R R L Sbjct: 9 MARALEVART-TPPGDVPVGAVIYDALGREVGHGVNRREASGDPTAHAEVEALRAAARTL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +L VTLEPCTMCA AI AR+R L +GA PK G + + H Sbjct: 68 GAWRLDGCELVVTLEPCTMCAGAILGARVRSLVFGAFEPKTGAVGSLFDALRDPRHLHIV 127 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E ++ +FF + R Sbjct: 128 EVRAGVREAECAALLTEFFADLR 150 >gi|189184848|ref|YP_001938633.1| cytosine deaminase [Orientia tsutsugamushi str. Ikeda] gi|189181619|dbj|BAG41399.1| cytosine deaminase [Orientia tsutsugamushi str. Ikeda] Length = 155 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 64/145 (44%), Positives = 90/145 (62%), Gaps = 2/145 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+E+A A E+PVG V V I++RA N+ + T HAEI+AI C Sbjct: 2 FMLQAIEQASQAFNLGEVPVGVVMVNRATRTILTRAYNKVETTLNPTFHAEIIAINKACS 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 +LS + L D+YV+LEPC MCAAA+S RI R+++GA + K G IENG + + T ++ Sbjct: 62 LLSCKYLHGYDIYVSLEPCAMCAAALSHVRIDRIFFGAYDEKFGAIENGVRLFYNTTVYY 121 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 PEIY GI E +S++++Q FF R Sbjct: 122 KPEIYGGIMELQSKELLQKFFSNLR 146 >gi|167581517|ref|ZP_02374391.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia thailandensis TXDOH] Length = 194 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 78/148 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL A+ A E+PVGAV V +++I+R N D +AHAE+ A+R Sbjct: 27 ERDRRYMRIALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 86 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L +P +LYVTLEPC MC+ AI ARI R+ +GA +PK G + + Sbjct: 87 AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADVR 146 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ ++ FF ERR Sbjct: 147 LNHHTTVEGGVLADECGAALKSFFAERR 174 >gi|72381983|ref|YP_291338.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. NATL2A] gi|72001833|gb|AAZ57635.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. NATL2A] Length = 155 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 51/143 (35%), Positives = 77/143 (53%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ L +A+ R E+P+ AV + + I GNR +KD HAE++A+R I Sbjct: 1 MTRLLTKARLVGERGEVPIAAVILDKKGRCIGYGGNRRESMKDPLGHAELVALRQASWIK 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + + L V LEPC MCA A+ AR+ ++ YG+ +PK G + + HH Sbjct: 61 NDWRFNDCTLIVNLEPCPMCAGALIQARMGKIIYGSEDPKRGALGGTINLAEHKSAHHRM 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 I GI E+ SR+II D+FK++R Sbjct: 121 LIERGIMEEESRKIIVDWFKDKR 143 >gi|317507917|ref|ZP_07965613.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Segniliparus rugosus ATCC BAA-974] gi|316253782|gb|EFV13156.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Segniliparus rugosus ATCC BAA-974] Length = 166 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 51/129 (39%), Positives = 70/129 (54%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80 ++PVGAV + ++RA N L D TAHAEILA+R +L L L VTL Sbjct: 28 DVPVGAVVFGPDGAELARAANAREALGDPTAHAEILALRQAAAVLGDGWRLVGCTLAVTL 87 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A ARI R+ +GA PK G + + T +H P + PG+ E ++ Sbjct: 88 EPCTMCAGAAVNARIGRIVFGAREPKTGAVGSLWDVVTDPRLNHRPLVRPGVLEPECAEL 147 Query: 141 IQDFFKERR 149 + FF++ R Sbjct: 148 TRSFFRKLR 156 >gi|329938756|ref|ZP_08288152.1| putative deaminase [Streptomyces griseoaurantiacus M045] gi|329302247|gb|EGG46139.1| putative deaminase [Streptomyces griseoaurantiacus M045] Length = 157 Score = 175 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 1/126 (0%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PVGAV + + ++ N D TAHAE+LA+R + L L VTL Sbjct: 15 GDVPVGAVVLSADGTPLATGHNEREATGDPTAHAEVLALRRAAAATGEWRLSGCTLVVTL 74 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ +R+ R+ YGA + K G + +H PE+ G+ + ++ Sbjct: 75 EPCTMCAGALQQSRVDRVVYGARDDKAGAAGSLWDLLRDRRLNHRPEVIEGVLAEDCARL 134 Query: 141 IQDFFK 146 + DFF+ Sbjct: 135 LTDFFR 140 >gi|260906121|ref|ZP_05914443.1| cytidine/deoxycytidine deaminase [Brevibacterium linens BL2] Length = 148 Score = 175 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 46/131 (35%), Positives = 71/131 (54%), Gaps = 1/131 (0%) Query: 20 LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78 +++PVGAV + N +I R NR +D HAE++A+R + + L + L V Sbjct: 13 EHDDVPVGAVVIDGNGAVIGRGHNRREVDQDPLGHAELMAMRNAAEVTGRWRLDDATLVV 72 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 TLEPC MCA A+ +RI R+ YGA + K G + H PE+Y G++ R R Sbjct: 73 TLEPCAMCAGAVVGSRIARVVYGAFDEKAGAAGSVWDLLRDRAALHHPEVYSGVAASRCR 132 Query: 139 QIIQDFFKERR 149 +++ +FF +R Sbjct: 133 ELLSEFFAAKR 143 >gi|57239296|ref|YP_180432.1| putative deaminase [Ehrlichia ruminantium str. Welgevonden] gi|58579261|ref|YP_197473.1| hypothetical protein ERWE_CDS_05970 [Ehrlichia ruminantium str. Welgevonden] gi|57161375|emb|CAH58299.1| putative deaminase [Ehrlichia ruminantium str. Welgevonden] gi|58417887|emb|CAI27091.1| Conserved hypothetical protein (putative cytidine deaminase) [Ehrlichia ruminantium str. Welgevonden] Length = 145 Score = 175 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 73/143 (51%), Positives = 95/143 (66%), Gaps = 4/143 (2%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ +AQ E+PVGAV V N K+IS N N + D TAHAEIL+IR C +L Sbjct: 6 YMRLAIGKAQE--DCLEVPVGAVIVYNGKVISCQNNSNVKNCDPTAHAEILSIRHACIVL 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S IL + D+YVTLEPC MCA AIS ARIRRLY+GA N K GG+ENG + + CH P Sbjct: 64 STHILNQCDMYVTLEPCAMCAQAISFARIRRLYFGAYNKKYGGVENGARVF--HFCHSVP 121 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GI E+ + +++ +FF+ R Sbjct: 122 EVYGGILEEENIRLMTNFFRRLR 144 >gi|256852104|ref|ZP_05557491.1| tRNA-adenosine deaminase [Lactobacillus jensenii 27-2-CHN] gi|260661326|ref|ZP_05862239.1| tRNA-adenosine deaminase [Lactobacillus jensenii 115-3-CHN] gi|282934787|ref|ZP_06340025.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1] gi|256615516|gb|EEU20706.1| tRNA-adenosine deaminase [Lactobacillus jensenii 27-2-CHN] gi|260547781|gb|EEX23758.1| tRNA-adenosine deaminase [Lactobacillus jensenii 115-3-CHN] gi|281301150|gb|EFA93456.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1] Length = 174 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 50/149 (33%), Positives = 82/149 (55%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M A EA+ A ++E+P+GA+ V ++I R NR T HAEILAI Sbjct: 5 EEKKHYMELAFAEAKKAEAQDEVPIGAIVVDPKGQVIGRGYNRRELDNVATHHAEILAIN 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L+ L L+VTLEPC MCA AI AR++ ++YGA + K G + + + Sbjct: 65 EACKTLNSWRLINCSLFVTLEPCAMCAGAIINARLKEVFYGAPDHKAGASGSVVDLFAVE 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P++ G+ ++ ++ +FF+ R Sbjct: 125 KFNHHPQVIRGLYRDKASSMLTNFFRTIR 153 >gi|194033488|ref|XP_001924271.1| PREDICTED: tRNA-specific adenosine deaminase 2 isoform 1 [Sus scrofa] Length = 191 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 8/154 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A++ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 20 EETEKWMEQAMQMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 79 Query: 62 GCRILS------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E+ LYVT+EPC MCAAA+ L +I + YG N + GG + Sbjct: 80 VLDWCHRGGKSPSEVFERTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLD 139 Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 140 IASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173 >gi|86741404|ref|YP_481804.1| tRNA-adenosine deaminase [Frankia sp. CcI3] gi|86568266|gb|ABD12075.1| tRNA-adenosine deaminase [Frankia sp. CcI3] Length = 196 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 3/145 (2%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M AL+ A + PVGAV + I+ A + D TA+AEILA+ Sbjct: 42 QYEPWMRRALKLATTLPDPGADDPPVGAVIYGPDGTEIAAAHHDRERTADPTAYAEILAL 101 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + L L + L TLEP TM A AI LARI RL G + G + + Sbjct: 102 RQAAQALGTWRLTDCTLVTTLEPGTMSAGAIVLARIPRLIIGTWDKYNGAVCSLWDVVRD 161 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 +H E+ P + + ++ + Sbjct: 162 RRLNHFVEVIPDVLKDECDALLDSY 186 >gi|326488167|dbj|BAJ89922.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 218 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 19/161 (11%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL++A+ A E+PVG V V N K+I+ NR ++ T HAE+ AI + + Sbjct: 41 AFMELALDQAKFALDNLEVPVGCVIVENGKVIASGSNRTNATRNATRHAEMEAIDVLLQE 100 Query: 66 LSQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 E DLYVT EPC MCA+A+S+ IR +Y+G N K GG + Sbjct: 101 WQSIGLDQTLVAEKFAGCDLYVTCEPCIMCASALSILGIREVYFGCPNDKFGGCGSVMSL 160 Query: 117 YT----------LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + T + GI + + + ++F+++ Sbjct: 161 HESLLSDDLTGSQDTRSRGFKCTGGIMAEEAVALFRNFYEQ 201 >gi|220905293|ref|YP_002480605.1| CMP/dCMP deaminase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869592|gb|ACL49927.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 195 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 1/146 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M AL+ A++AA E+PVGAV V + ++++ GN L D TAHAEILA+R Sbjct: 42 ECLMDRALDRARHAAALGEVPVGAVLVAPDGRVLAEEGNAPVALSDPTAHAEILALRRAG 101 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 ++L L L VTLEPC MCAAA AR+ L YGA++ G + + +++ + + Sbjct: 102 QMLGNYRLGGCVLVVTLEPCAMCAAACIHARLAGLVYGAADDLAGAVVSRAEYFDAQSAN 161 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 HS G+ + +++DFF RR Sbjct: 162 HSLWHMGGVRGEECATLLRDFFAVRR 187 >gi|162147097|ref|YP_001601558.1| cytidine deaminase protein [Gluconacetobacter diazotrophicus PAl 5] gi|161785674|emb|CAP55245.1| putative cytidine deaminase protein [Gluconacetobacter diazotrophicus PAl 5] Length = 193 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV + + I++RAGN+ D AHAE+L +R RIL L L VTL Sbjct: 44 GEVPVGAVLLGPDGTILARAGNQVEAGHDAAAHAEMLVMRAAARILGSPRLTGCTLVVTL 103 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCAAA R+ R+ +GA +PKGGG+E+G + C H PE G+ E+ + + Sbjct: 104 EPCPMCAAASVHFRVGRIVFGAYDPKGGGVEHGPRLLARPDCLHRPEWVGGVREREAAAL 163 Query: 141 IQDFFKERR 149 ++DFF R Sbjct: 164 LRDFFAALR 172 >gi|61098160|ref|NP_080024.3| tRNA-specific adenosine deaminase 2 [Mus musculus] gi|81885246|sp|Q6P6J0|ADAT2_MOUSE RecName: Full=tRNA-specific adenosine deaminase 2; AltName: Full=Deaminase domain-containing protein 1; AltName: Full=tRNA-specific adenosine-34 deaminase subunit ADAT2 gi|38328211|gb|AAH62195.1| Adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae) [Mus musculus] gi|148671551|gb|EDL03498.1| deaminase domain containing 1 [Mus musculus] Length = 191 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 8/154 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 20 QETEKWMEEAMRMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 79 Query: 62 GCRILSQE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 Q + LYVT+EPC MCAAA+ L +I + YG N + GG + Sbjct: 80 VLDWCHQHGQSPSTVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 139 Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 140 IASADLPNTGRPFQCIPGYRAEEAVELLKTFYKQ 173 >gi|262183239|ref|ZP_06042660.1| hypothetical protein CaurA7_04544 [Corynebacterium aurimucosum ATCC 700975] Length = 147 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 51/144 (35%), Positives = 72/144 (50%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A+ +IPVGAV + ++ NR +L D TAHAE+ AIR R+ Sbjct: 1 MRRALEVART-TPVGDIPVGAVLYDASGNELATGVNRREQLNDPTAHAEVEAIRQAVRVH 59 Query: 67 SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L +L VTLEPC MCA AI +R+ + +GA PK G + + H Sbjct: 60 GDGWRLEGCELVVTLEPCAMCAGAIQASRVSSVVFGAFEPKTGACGSLVEVLRAPGALHV 119 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+ G+ E+ +++ FF R Sbjct: 120 PEVRSGVLEEECAELLTGFFGGLR 143 >gi|329119731|ref|ZP_08248411.1| tRNA-specific adenosine deaminase [Neisseria bacilliformis ATCC BAA-1200] gi|327464180|gb|EGF10485.1| tRNA-specific adenosine deaminase [Neisseria bacilliformis ATCC BAA-1200] Length = 151 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 54/142 (38%), Positives = 82/142 (57%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M+ AL++A+ AA NE+PVGA+ V + +I++ A N V AHAEILA+ + L Sbjct: 10 MAAALDKARQAAAENEVPVGALIVRDGQILAAAHNACAAQNSVAAHAEILALTAAGQSLG 69 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L D Y+TLEPC MCA+A+ ARI+R+ + A+ PK G + + + Sbjct: 70 TPRLDSCDAYITLEPCPMCASALMQARIKRVIFAAAEPKSGAAGSVCNLFADTRLNAHTA 129 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 ++ GI + SR ++Q FF+ RR Sbjct: 130 VFGGIMAEESRTLLQAFFRSRR 151 >gi|295103971|emb|CBL01515.1| tRNA-adenosine deaminase [Faecalibacterium prausnitzii SL3/3] Length = 166 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 1/126 (0%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV + ++I+ A N K+ HAE+LAI C+ L L E +L+VTLEPC Sbjct: 23 VPVGAVVARHGEVIATAHNTRETEKNALHHAELLAIDAACKALGGWRLWECELFVTLEPC 82 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA I +R+RR+ YGA++ K G + T + L +H P + G+ E ++Q++Q Sbjct: 83 PMCAGGIINSRLRRVVYGAADTKAGCCGSVTDLFALP-FNHHPVVEKGLREAEAQQLLQA 141 Query: 144 FFKERR 149 FF R Sbjct: 142 FFVSLR 147 >gi|118468323|ref|YP_890544.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium smegmatis str. MC2 155] gi|118169610|gb|ABK70506.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium smegmatis str. MC2 155] Length = 149 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 50/143 (34%), Positives = 75/143 (52%), Gaps = 3/143 (2%) Query: 9 SCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 ALE A+ A R ++P+GAV + ++RA N D HAEI+A+R ++L Sbjct: 8 RAALEAARTAGPR-DVPIGAVVYAADGTELARAVNVREAYGDPAGHAEIVAMRAAAKVLG 66 Query: 68 Q-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VT+EPCTMCA A+ LAR+ RL +GA PK G + + +H P Sbjct: 67 DGWRLEGATLAVTVEPCTMCAGALVLARVSRLVFGAWEPKTGAVGSLWDVVRDRRLNHRP 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ ++++FF +R Sbjct: 127 EVIGGVLADECAALLEEFFARQR 149 >gi|317034863|ref|XP_001400634.2| cytidine and deoxycytidylate deaminase zinc-binding domain protein [Aspergillus niger CBS 513.88] Length = 190 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 43/146 (29%), Positives = 71/146 (48%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL + A E PVG V V + KI+ N + + T HAE +AI Sbjct: 14 SEHAYFMKQALLMGEKALETGETPVGCVLVYDKKIVGFGMNDTNKSMNGTRHAEFIAIEE 73 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L DLYVT+EPC MCA+A+ +IR++Y+G N + GG + + + Sbjct: 74 MLETYPRSALRSTDLYVTVEPCVMCASALRQYQIRKVYFGCGNDRFGGTGSILSLHADRS 133 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147 S + G+ + + +++ F+ + Sbjct: 134 IDPSYPVQGGLFHKEAIMLLRRFYIQ 159 >gi|297566040|ref|YP_003685012.1| tRNA(Ile)-lysidine synthetase [Meiothermus silvanus DSM 9946] gi|296850489|gb|ADH63504.1| tRNA(Ile)-lysidine synthetase [Meiothermus silvanus DSM 9946] Length = 524 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 58/146 (39%), Positives = 80/146 (54%), Gaps = 7/146 (4%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL EA +A R E+P+GAV V K+I++AGN+ E +D TAHAE+LAIR Sbjct: 380 DERFMRLALAEAHSAGGRGEVPIGAVLVRGEKVIAKAGNQVEEFQDATAHAELLAIRAAL 439 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L +++LP LYVTLEPC MC A+ A++ RL YG N K G +T+ Sbjct: 440 EALGEKVLPGSTLYVTLEPCPMCYGAMLEAQVSRLVYGMENLKAGA-------FTVYGLQ 492 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 + G E ++++ FF R Sbjct: 493 PRIGVDAGRLEGPCAKLLKAFFVRMR 518 >gi|54022202|ref|YP_116444.1| putative cytidine/deoxycytidylate deaminase [Nocardia farcinica IFM 10152] gi|54013710|dbj|BAD55080.1| putative cytidine/deoxycytidylate deaminase [Nocardia farcinica IFM 10152] Length = 159 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 3/148 (2%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + A+E AA ++PVGAV + ++RA N D TAHAEILA+R Sbjct: 13 DEAMIRVAIEA-AAAADPRDVPVGAVVFDAQGRELARAANAREASGDPTAHAEILALRRA 71 Query: 63 CRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 ++ L L VTLEPCTMCA A+ LAR+ RL +GA PK G + + Sbjct: 72 AQVHGDGWRLAGATLAVTLEPCTMCAGALVLARVDRLVFGAWEPKTGAVGSLWDVVRDRR 131 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ E ++ FF+ R Sbjct: 132 LNHRPEVRGGVLETECAALLDTFFRTHR 159 >gi|239916882|ref|YP_002956440.1| tRNA-adenosine deaminase [Micrococcus luteus NCTC 2665] gi|281414664|ref|ZP_06246406.1| tRNA-adenosine deaminase [Micrococcus luteus NCTC 2665] gi|239838089|gb|ACS29886.1| tRNA-adenosine deaminase [Micrococcus luteus NCTC 2665] Length = 168 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 7/155 (4%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ + +M AL A+ A ++P+GA V + +++ GN + D TAHAE+LA+R Sbjct: 13 EQEHAWMGLALRAARAAGAAGDVPIGAALVAGDGTVLAVVGNEREQHHDPTAHAEVLALR 72 Query: 61 ------MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 L + L VTLEPC MCA A+ LARI R+ +GA +PK G + Sbjct: 73 RGAELRAAAGAHDGWRLTDCTLVVTLEPCPMCAGALLLARIPRVVFGAWDPKAGACGSVL 132 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + S +++ FF +R Sbjct: 133 DVVRDPRFNHRVQVRAGVRSEESAALLRGFFAAQR 167 >gi|227499915|ref|ZP_03930008.1| nucleoside deaminase [Anaerococcus tetradius ATCC 35098] gi|227218024|gb|EEI83297.1| nucleoside deaminase [Anaerococcus tetradius ATCC 35098] Length = 169 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 76/148 (51%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM A+ EA+ A E+PVGAV VL+ KII R N + K HAEI+AI+ Sbjct: 14 EEDYFFMGEAINEARLARFIEEVPVGAVIVLDGKIIGRGHNYTFKGKSALKHAEIMAIKE 73 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L +YVT+EPC+MCA AI +RI RL G + K G + T + Sbjct: 74 ASAYIDDFRLERATMYVTMEPCSMCAGAIINSRIDRLVIGIRDHKRGACGSNTNITGDRS 133 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ ++ + IQ FF+ R Sbjct: 134 QLHYLDAEFGLRDEEALYEIQTFFRYLR 161 >gi|332213485|ref|XP_003255854.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Nomascus leucogenys] Length = 191 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 8/154 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 20 EETEKWMEEAVRMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 79 Query: 62 GCRIL------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E+ LYVT+EPC MCAAA+ L +I + YG N + GG + Sbjct: 80 VLDWCRQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 139 Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 140 IASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173 >gi|255324366|ref|ZP_05365485.1| tRNA-specific adenosine deaminase [Corynebacterium tuberculostearicum SK141] gi|255298585|gb|EET77883.1| tRNA-specific adenosine deaminase [Corynebacterium tuberculostearicum SK141] Length = 143 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 49/144 (34%), Positives = 73/144 (50%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+ A+ ++PVGAV ++ NR EL D TAHAE+ AIR R+ Sbjct: 1 MRRALDVAKRTPA-GDVPVGAVLYDAAGTELATGVNRREELADPTAHAEVEAIRQAVRVH 59 Query: 67 SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L +L VTLEPC MCA A+ AR+ + +GA PK G + T + Sbjct: 60 GDGWRLSGCELVVTLEPCAMCAGALQAARVGSVVFGAFEPKTGACGSLIDVLRAPTAPFT 119 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P++ G+ E+ ++++FF + R Sbjct: 120 PQVRGGVLEEECAALLRNFFDDLR 143 >gi|256372768|ref|YP_003110592.1| CMP/dCMP deaminase zinc-binding [Acidimicrobium ferrooxidans DSM 10331] gi|256009352|gb|ACU54919.1| CMP/dCMP deaminase zinc-binding [Acidimicrobium ferrooxidans DSM 10331] Length = 156 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 50/147 (34%), Positives = 76/147 (51%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 ++ A A++AA E+PVGAV V + +++ N E + AHAE+LA+ Sbjct: 5 DDRRWLDVAFGLAEDAARTAEVPVGAVVVRSGRVLGARHNETIERRSSLAHAELLALSDA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + D+YVTLEPC MCA A+ LAR RR+ + A +PK G + Sbjct: 65 LADAGDGYVLGADVYVTLEPCAMCAGALVLARARRVVFAAWDPKAGACGSLMNIAADPRL 124 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H EI G+ +R+ +++ FF ERR Sbjct: 125 NHELEIVGGVDAERAALLLRRFFSERR 151 >gi|255021639|ref|ZP_05293681.1| tRNA-specific adenosine-34 deaminase [Acidithiobacillus caldus ATCC 51756] gi|254968899|gb|EET26419.1| tRNA-specific adenosine-34 deaminase [Acidithiobacillus caldus ATCC 51756] Length = 178 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M ALE+A+ A+L E+PVGAV + + +++RA NR ++D AHAEIL +R Sbjct: 22 TDDRHWMGLALEQARCASLVGEVPVGAVLLSASGALLARAHNRPIAMQDPCAHAEILVLR 81 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R L L LYVTLEPC MCA A+ AR+ +L + A +PKGG + + Sbjct: 82 EAARALGNYRLLGTTLYVTLEPCAMCAGAMLQARVAQLVFAARDPKGGAVVSRLGVLDAE 141 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H G + S+ ++QDFF+ RR Sbjct: 142 PRLHRLRWREGPGARESQALLQDFFRARR 170 >gi|39938589|ref|NP_950355.1| cytosine/adenosine deaminase [Onion yellows phytoplasma OY-M] gi|39721698|dbj|BAD04188.1| cytosine/adenosine deaminase [Onion yellows phytoplasma OY-M] Length = 161 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 62/148 (41%), Positives = 82/148 (55%), Gaps = 1/148 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL+EAQ A L+ E+P+GAVAVLN KII+RA N K HAE LA+ Sbjct: 6 QQHIFFMKEALKEAQKAYLKEEVPIGAVAVLNQKIIARAHNNRNTKKLFFGHAEFLALMK 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + ++ L +V LYVTLEPC MC AI A I+ LYYG S K + + + Sbjct: 66 AGKKINSRFLNDVSLYVTLEPCLMCTGAIIQAGIKNLYYGTSMEKSYSFNDMSSIQNMPF 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 I G+ Q S Q++Q FF+E R Sbjct: 126 MD-KLNIQSGLLAQESMQLLQKFFQELR 152 >gi|269958624|ref|YP_003328411.1| putative cytosine/adenosine deaminase [Anaplasma centrale str. Israel] gi|269848453|gb|ACZ49097.1| putative cytosine/adenosine deaminase [Anaplasma centrale str. Israel] Length = 154 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 67/150 (44%), Positives = 94/150 (62%), Gaps = 5/150 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59 M + +M A+ EA ++ E+PVGA+ V +IS N D TAHAE+LAI Sbjct: 3 MLPESPYMRLAMLEAVSSPA--EVPVGAIVVDERGVVISSRHNLTLRNSDPTAHAEMLAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R C S +L D+YVTLEPC MCA AISL+RIRRLY+GA N K GG+E+G + + Sbjct: 61 REACLHFSTHVLNNCDMYVTLEPCAMCAYAISLSRIRRLYFGAYNVKCGGVEHGARVFRF 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 C+H PE+Y G E+ + +I+++FF++ R Sbjct: 121 --CNHIPEVYGGFLERENAEILKNFFQKLR 148 >gi|326403669|ref|YP_004283751.1| tRNA-specific adenosine deaminase [Acidiphilium multivorum AIU301] gi|325050531|dbj|BAJ80869.1| tRNA-specific adenosine deaminase [Acidiphilium multivorum AIU301] Length = 154 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 57/130 (43%), Positives = 84/130 (64%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+PVGAV V +++ AGN D TAHAEILA+R + + L L+VT Sbjct: 17 RGEVPVGAVVVDAGGSVLAAAGNEVEARGDPTAHAEILALRAAAQRRGGKFLQGCRLFVT 76 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC +CAAAISL RI RL +GA +PK GG+E+G + ++ TCH+ PE+ G+ + + + Sbjct: 77 LEPCPLCAAAISLFRIDRLVFGAYDPKSGGVEHGPRVFSHPTCHYRPEVVGGVDQTAAAE 136 Query: 140 IIQDFFKERR 149 +++ FF ++R Sbjct: 137 LLRHFFSQKR 146 >gi|224111764|ref|XP_002315970.1| predicted protein [Populus trichocarpa] gi|222865010|gb|EEF02141.1| predicted protein [Populus trichocarpa] Length = 1071 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 54/114 (47%), Positives = 65/114 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K +FM AL +A+ AA E+PVGAV V + KII+R N EL+D TAHAE++ IR Sbjct: 927 KIDEMFMREALLDAKKAADSWEVPVGAVMVHHGKIIARGYNLVEELRDSTAHAEMICIRE 986 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 L L E LYVTLEPC MCA AI ARI L +GA N G + Sbjct: 987 ASNQLRSWRLSETTLYVTLEPCPMCAGAILQARINTLVWGAPNKLLGADGSWIS 1040 >gi|160942564|ref|ZP_02089811.1| hypothetical protein FAEPRAM212_00039 [Faecalibacterium prausnitzii M21/2] gi|158446148|gb|EDP23151.1| hypothetical protein FAEPRAM212_00039 [Faecalibacterium prausnitzii M21/2] Length = 169 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 1/126 (0%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV + ++++ A N K+ HAE+LAI C+ L L E +L+VTLEPC Sbjct: 26 VPVGAVVARHGEVVATAHNTRETEKNALHHAELLAIDAACKALGGWRLWECELFVTLEPC 85 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA I +R+RR+ YGA++ K G + T + L +H P + G+ E ++Q++Q Sbjct: 86 PMCAGGIINSRLRRVVYGAADTKAGCCGSVTDLFALP-FNHHPVVEKGLREAEAQQLLQA 144 Query: 144 FFKERR 149 FF R Sbjct: 145 FFVSLR 150 >gi|296199377|ref|XP_002747141.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Callithrix jacchus] Length = 191 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 8/154 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 20 EETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 79 Query: 62 GCRILS------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E+ LYVT+EPC MCAAA+ L +I + YG N + GG + Sbjct: 80 VLDWCGRSGKNSSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 139 Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 140 IASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173 >gi|297679305|ref|XP_002817478.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Pongo abelii] Length = 191 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 8/154 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 20 EETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 79 Query: 62 GCRIL------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E+ LYVT+EPC MCAAA+ L +I + YG N + GG + Sbjct: 80 VLDWCLQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 139 Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 140 IASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173 >gi|291244202|ref|XP_002741990.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Saccoglossus kowalevskii] Length = 209 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 8/149 (5%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M +L+ A +A E+PVG + V +++I + N E ++ T HAE++AI Sbjct: 14 KWMEKSLDMAHDALFNGEVPVGCLMVYKDEVIGKGRNCVNETRNATRHAEMVAIDEVIGW 73 Query: 66 LSQEI------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + + LYVT+EPC MCA A+ L + + YG SN + GG + + Sbjct: 74 CEKSNQVKEAVFSKTVLYVTVEPCIMCAGALRLLHVPLVVYGCSNERFGGCGSVLNVHKD 133 Query: 120 ATCHHS--PEIYPGISEQRSRQIIQDFFK 146 +H + GI + + +++DF+K Sbjct: 134 DIDNHGKPFKCISGIFAEEAIALLKDFYK 162 >gi|289704736|ref|ZP_06501159.1| cytidine and deoxycytidylate deaminase zinc-binding region [Micrococcus luteus SK58] gi|289558546|gb|EFD51814.1| cytidine and deoxycytidylate deaminase zinc-binding region [Micrococcus luteus SK58] Length = 168 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 7/155 (4%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ + +M AL A+ A ++P+GA V + +++ GN + D TAHAE+LA+R Sbjct: 13 EQEHAWMGLALRAARAAGAAGDVPIGAALVAGDGTVLAVVGNEREQHHDPTAHAEVLALR 72 Query: 61 ------MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 L + L VTLEPC MCA A+ LARI R+ +GA +PK G + Sbjct: 73 RGAELRAAAGAGDGWRLTDCTLVVTLEPCPMCAGALLLARIPRVVFGAWDPKAGACGSVL 132 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ G+ + S +++ FF +R Sbjct: 133 DVVRDPRFNHQVQVRAGVRSEESAALLRGFFAAQR 167 >gi|116515096|ref|YP_802725.1| hypothetical protein BCc_160 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256950|gb|ABJ90632.1| tRNA-specific adenosine deaminase [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 153 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 54/147 (36%), Positives = 77/147 (52%), Gaps = 1/147 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 N +M AL++A E+P+G++ + NN +IS A N L D +AHAEIL IR G Sbjct: 5 DNYWMKYALKQAYLGKKNGEVPIGSLLIKNNNLISSAWNSCINLFDASAHAEILVIRNGG 64 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 +IL L LYVT EPC MC+ AI ARI ++ YG+ + K F + Sbjct: 65 KILKNYRLKNTILYVTHEPCFMCSEAIINARINKVVYGSYSFKKNCFSYYINFLYINNIK 124 Query: 124 HSP-EIYPGISEQRSRQIIQDFFKERR 149 H EI GI ++++FF+ +R Sbjct: 125 HHIKEIKSGILLYECSNLLKNFFRRKR 151 >gi|226941431|ref|YP_002796505.1| CumB [Laribacter hongkongensis HLHK9] gi|226716358|gb|ACO75496.1| CumB [Laribacter hongkongensis HLHK9] Length = 171 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 55/138 (39%), Positives = 71/138 (51%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ AQ AA E+PVGA+ VL K+I R N D TAHAEI A+R Sbjct: 1 MRQAILLAQEAAAAGEVPVGALVVLEGKVIGRGANAPIGRHDPTAHAEIAALRAAAERAG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 LP +LYVTLEPC MCA AI ARI R+ +GAS+ K G + + +H E Sbjct: 61 NYRLPGAELYVTLEPCAMCAGAIQHARIARVVFGASDAKTGAAGSVVDLFAEPRLNHHAE 120 Query: 128 IYPGISEQRSRQIIQDFF 145 + G+ ++ FF Sbjct: 121 VCGGLLADECAAVLSGFF 138 >gi|68537118|ref|YP_251823.1| putative cytosine/adenosine deaminase [Corynebacterium jeikeium K411] gi|68264717|emb|CAI38205.1| putative cytosine/adenosine deaminase [Corynebacterium jeikeium K411] Length = 142 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 50/144 (34%), Positives = 70/144 (48%), Gaps = 4/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A ++PVGAV + + + + R NR D TAHAEILAIR + L Sbjct: 1 MRRALEIAAETPA-GDVPVGAVILGPDGRELGRGVNRREADNDPTAHAEILAIREAVQEL 59 Query: 67 SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L VTLEPC MCA A+ ARI + +GA P+ G + + H Sbjct: 60 GDAWRLEDCTLVVTLEPCAMCAGALVGARIGSIIFGAYEPRTGACGSVWDVPRESPL-HW 118 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ ++++ FF R Sbjct: 119 AEVRGGVLAGECEELLRQFFARLR 142 >gi|242279729|ref|YP_002991858.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio salexigens DSM 2638] gi|242122623|gb|ACS80319.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio salexigens DSM 2638] Length = 169 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+ EA A E+P+GA ++++ N D T HAE+ IR C+ L Sbjct: 24 MDTAIREAFKARRHEEVPIGAALFTAEGELLATGNNTPLTQNDPTGHAEVNCIRNACKNL 83 Query: 67 SQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 LP L VTLEPC MC AI AR+ + +GA +PK G + + + L+ +H Sbjct: 84 DNYRLPRGTILVVTLEPCIMCLGAIIHARVGGVVFGAPDPKAGAVVSNLEGTDLSFANHK 143 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 G+ E ++I+Q FF +R Sbjct: 144 FWTIGGVCENECKEILQSFFLHKR 167 >gi|237784829|ref|YP_002905534.1| putative cytosine/adenosine deaminase [Corynebacterium kroppenstedtii DSM 44385] gi|237757741|gb|ACR16991.1| putative cytosine/adenosine deaminase [Corynebacterium kroppenstedtii DSM 44385] Length = 163 Score = 173 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 4/151 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M AL+ A+ ++PVGAV V + ++ N D TAHAE++A+R Sbjct: 13 QQTERWMQMALDVAKR-TPPGDVPVGAVVVDASGHVVGEGCNERESTGDPTAHAEVIALR 71 Query: 61 MGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + L L VTLEPC MCA A +RI + +GA PK G + Sbjct: 72 AAAREVGDGWRLENHTLVVTLEPCVMCAGAAVTSRIGGIIFGAYEPKTGACGSVIDVVRD 131 Query: 120 ATC-HHSPEIYPGISEQRSRQIIQDFFKERR 149 + ++ G+ E+ + ++++FF RR Sbjct: 132 PAWPFPTVDVRGGVLERECQDLVEEFFARRR 162 >gi|260579466|ref|ZP_05847346.1| cytidine/deoxycytidylate deaminase family protein [Corynebacterium jeikeium ATCC 43734] gi|258602409|gb|EEW15706.1| cytidine/deoxycytidylate deaminase family protein [Corynebacterium jeikeium ATCC 43734] Length = 193 Score = 173 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 49/147 (33%), Positives = 70/147 (47%), Gaps = 4/147 (2%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M AL+ A ++PVGAV + + + + R NR D TAHAEILAIR Sbjct: 49 EALMRRALDVAAETPA-GDVPVGAVILGPDGRELGRGVNRREADNDPTAHAEILAIREAV 107 Query: 64 RILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L L + L VTLEPC MCA A+ ARI + +GA P+ G + + Sbjct: 108 QELGDAWRLEDCTLVVTLEPCAMCAGALVGARIGSIIFGAYEPRTGACGSVWDVPRESPL 167 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ ++++ FF R Sbjct: 168 -HWVEVRGGVLAGECEELLRQFFARLR 193 >gi|134024903|gb|AAI35110.1| Unknown (protein for IMAGE:7163502) [Danio rerio] Length = 241 Score = 173 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 10/152 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM--- 61 +M+ A + A A E+PVG + V NN+II + N E K+ T HAE++A+ Sbjct: 49 QTWMAKAFDMAVEALENGEVPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLD 108 Query: 62 GCR---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 CR +E+ + LYVT+EPC MCAAA+ L RI + YG N + GG + + Sbjct: 109 WCRLREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGGCGSVLDVSS 168 Query: 119 LATCHH---SPEIYPGISEQRSRQIIQDFFKE 147 H S + G + + ++++ F+K+ Sbjct: 169 D-HLPHTGTSFKCIAGYRAEEAVEMLKTFYKQ 199 >gi|113816713|gb|AAH37955.2| ADAT2 protein [Homo sapiens] Length = 193 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 8/154 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 22 EETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 81 Query: 62 GCRIL------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E+ LYVT+EPC MCAAA+ L +I + YG N + GG + Sbjct: 82 VLDWCRQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 141 Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 142 IASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 175 >gi|15828339|ref|NP_302602.1| cytidine/deoxycytidylate deaminase [Mycobacterium leprae TN] gi|221230816|ref|YP_002504232.1| putative cytidine/deoxycytidylate deaminase [Mycobacterium leprae Br4923] gi|13094032|emb|CAC31991.1| possible cytidine/deoxycytidylate deaminase [Mycobacterium leprae] gi|219933923|emb|CAR72573.1| possible cytidine/deoxycytidylate deaminase [Mycobacterium leprae Br4923] Length = 171 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 53/150 (35%), Positives = 74/150 (49%), Gaps = 3/150 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 + AL A A R ++P+GAV + + ++RA N + D TAHAEILA+R Sbjct: 15 TTDEDLIRAALTVATTAGSR-DVPIGAVVLGADGNELARAVNAREAIGDPTAHAEILAMR 73 Query: 61 MGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L L L VT+EPCTMCA A+ LARI RL +GA PK G + + Sbjct: 74 AAAGTLGNGWRLEGTTLAVTVEPCTMCAGALVLARIERLVFGAWQPKTGAVGSLWDVVRD 133 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H P + G+ Q ++ FF +R Sbjct: 134 HRLNHRPAVRGGVLAQECTAPLEAFFAHQR 163 >gi|123448020|ref|XP_001312744.1| Cytidine and deoxycytidylate deaminase zinc-binding region family protein [Trichomonas vaginalis G3] gi|121894602|gb|EAX99814.1| Cytidine and deoxycytidylate deaminase zinc-binding region family protein [Trichomonas vaginalis G3] Length = 171 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 4/148 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M AL+ A +A E+ VG V + N ++I+ GN+ D T HAE++ + Sbjct: 16 EMHEKYMQLALKAADDAFDAGEVAVGCVIIHNGQVIASGGNQTNAKNDATRHAELVTFKH 75 Query: 62 G--CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R ++IL E LYVT EPC MCA+AI + I R+ YG N + GG + +T Sbjct: 76 LKESRSDYKQILKESTLYVTCEPCIMCASAIKMMGIPRVVYGCLNDRFGGCGSVYNIHTH 135 Query: 120 ATCH--HSPEIYPGISEQRSRQIIQDFF 145 S ++ G+ + + + ++ F+ Sbjct: 136 EIMPSLPSYDVISGVLGEEAIEALRRFY 163 >gi|333025914|ref|ZP_08453978.1| putative cytidine/deoxycytidine deaminase [Streptomyces sp. Tu6071] gi|332745766|gb|EGJ76207.1| putative cytidine/deoxycytidine deaminase [Streptomyces sp. Tu6071] Length = 163 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 45/127 (35%), Positives = 65/127 (51%), Gaps = 1/127 (0%) Query: 24 IPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 IPVGAV + + ++RA N D TAHAE+LA+R + + L L VTLEP Sbjct: 37 IPVGAVVLDASGTELARARNEREATHDPTAHAEVLALRRAAAVRGEWRLTGCTLVVTLEP 96 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCA A++ +R+ R+ YGA +PK G + +H E+ G+ S ++ Sbjct: 97 CPMCAGALTQSRVERVVYGARDPKAGAAGSQWDLLRDRRLNHRAEVVEGVLAPESTALLD 156 Query: 143 DFFKERR 149 FF R Sbjct: 157 AFFTATR 163 >gi|114609579|ref|XP_518775.2| PREDICTED: hypothetical protein LOC463037 isoform 2 [Pan troglodytes] Length = 191 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 8/154 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 20 EETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 79 Query: 62 GCRIL------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E+ LYVT+EPC MCAAA+ L +I + YG N + GG + Sbjct: 80 VLDWCRQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 139 Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 140 IASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173 >gi|124107608|ref|NP_872309.2| tRNA-specific adenosine deaminase 2 [Homo sapiens] gi|74750199|sp|Q7Z6V5|ADAT2_HUMAN RecName: Full=tRNA-specific adenosine deaminase 2; AltName: Full=Deaminase domain-containing protein 1; AltName: Full=tRNA-specific adenosine-34 deaminase subunit ADAT2 gi|31652308|emb|CAD92490.1| novel protein similar to yeast and bacterial cytosine deaminase [Homo sapiens] gi|119568252|gb|EAW47867.1| deaminase domain containing 1, isoform CRA_a [Homo sapiens] Length = 191 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 8/154 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 20 EETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 79 Query: 62 GCRIL------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E+ LYVT+EPC MCAAA+ L +I + YG N + GG + Sbjct: 80 VLDWCRQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 139 Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 140 IASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173 >gi|148239680|ref|YP_001225067.1| tRNA-specific adenosine deaminase [Synechococcus sp. WH 7803] gi|147848219|emb|CAK23770.1| tRNA-specific adenosine deaminase [Synechococcus sp. WH 7803] Length = 175 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 1/145 (0%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M L A+ EIPV AV + + I NR L D HAE++A+R G Sbjct: 17 AWMQRLLNRAERVGATGEIPVAAVLLDEAGRCIGHGSNRRECLNDPLGHAELMALRQGAW 76 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 +L + L VTLEPC MCA A+ AR+ ++ + A + K GG+ + + HH Sbjct: 77 LLGDWRMNHCTLLVTLEPCPMCAGALVQARVGQVIFAARDSKRGGLGSTINLAEHQSAHH 136 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + G+ E+++ ++ +F++RR Sbjct: 137 HMRVVSGVLEEQASALLAGWFRQRR 161 >gi|301753666|ref|XP_002912694.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Ailuropoda melanoleuca] Length = 192 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 8/154 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A++ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 21 EETKKWMEEAMQMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 80 Query: 62 GCRILS------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E+ LYVT+EPC MCAAA+ L +I + YG N + GG + Sbjct: 81 ALDWCHRSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 140 Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 141 IASADLPNTGRPFKCIPGYRAEEAVEMLKTFYKQ 174 >gi|240281302|gb|EER44805.1| tRNA specific adenosine deaminase [Ajellomyces capsulatus H143] Length = 197 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 45/146 (30%), Positives = 72/146 (49%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +K FM AL+ + A E PVG V V N++ N + + T HAE LAI Sbjct: 15 QKHEYFMKKALDMGEEALASGETPVGCVLVHNDEATGSGMNDTNKSMNGTRHAEFLAIEE 74 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + I E DLYVT+EPC MCA+A+ +IR +Y+G +N + GG ++ Sbjct: 75 VLRNYPRSIFRETDLYVTVEPCIMCASALRQYQIRHVYFGCANERFGGTGGVLNLHSDPG 134 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147 + G+ + + +++ F+ + Sbjct: 135 IDPPYGLTGGLFRREAIMLLRRFYIQ 160 >gi|169234864|ref|NP_001108500.1| deaminase domain containing 1 [Rattus norvegicus] gi|165970946|gb|AAI58617.1| Deadc1 protein [Rattus norvegicus] Length = 191 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 8/154 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 20 QETEKWMEEAMRMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 79 Query: 62 GCRILSQE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + + LYVT+EPC MCAAA+ L +I + YG N + GG + Sbjct: 80 VLDWCHRHGQSPSAVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 139 Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 140 IASADLPNTGRPFQCIPGYRAEEAVELLKTFYKQ 173 >gi|148260476|ref|YP_001234603.1| CMP/dCMP deaminase, zinc-binding [Acidiphilium cryptum JF-5] gi|146402157|gb|ABQ30684.1| tRNA-adenosine deaminase [Acidiphilium cryptum JF-5] Length = 151 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 57/130 (43%), Positives = 84/130 (64%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+PVGAV V +++ AGN D TAHAEILA+R + + L L+VT Sbjct: 14 RGEVPVGAVVVDAGGSVLAAAGNEVEARGDPTAHAEILALRAAAQRRGGKFLQGCRLFVT 73 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC +CAAAISL RI RL +GA +PK GG+E+G + ++ TCH+ PE+ G+ + + + Sbjct: 74 LEPCPLCAAAISLFRIDRLVFGAYDPKSGGVEHGPRVFSHPTCHYRPEVVGGVDQTAAAE 133 Query: 140 IIQDFFKERR 149 +++ FF ++R Sbjct: 134 LLRHFFSQKR 143 >gi|289422456|ref|ZP_06424299.1| tRNA-specific adenosine deaminase [Peptostreptococcus anaerobius 653-L] gi|289157028|gb|EFD05650.1| tRNA-specific adenosine deaminase [Peptostreptococcus anaerobius 653-L] Length = 154 Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 79/149 (53%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+K FM AL EA+ A E P+GAV V +I+ R N+ + AHAEI+AI Sbjct: 1 MEK-EYFMEQALVEARKAYALKETPIGAVIVYQGRIVGRGFNQVELQNNPLAHAEIMAIN 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L++ L + +YVT+EPC MCA AI+ +RIR LY GA + K + F Sbjct: 60 DAVKNLARWRLYDCQMYVTMEPCFMCAGAIANSRIRGLYIGAGHHKNHIVTKHNDFKKEF 119 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 GI E+ +I+ DFFKERR Sbjct: 120 YTDSKINFEIGILEEDCSRILVDFFKERR 148 >gi|124360458|gb|ABN08468.1| CMP/dCMP deaminase, zinc-binding [Medicago truncatula] Length = 178 Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats. Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 11/157 (7%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ ++FM A+++A+ A E+PVG V V + K+I+ NR E ++ T HAE+ AI + Sbjct: 4 QETHIFMELAIQQAKLAMGALEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAIDV 63 Query: 62 GCRILSQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + LYVT EPC MCA+A+S I+ ++YG SN K GG + Sbjct: 64 LLEQWQKNGLSMTEVAKKFSNCSLYVTCEPCIMCASALSNLGIKEVFYGCSNDKFGGCGS 123 Query: 113 GTQFYTLATC--HHSPEIYPGISEQRSRQIIQDFFKE 147 + + + GI + + +++ F+++ Sbjct: 124 ILSLHLSDAVSPNKGFKCAGGIMAEEAVLLLRTFYEQ 160 >gi|296166870|ref|ZP_06849287.1| tRNA-specific adenosine deaminase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897747|gb|EFG77336.1| tRNA-specific adenosine deaminase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 152 Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats. Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80 ++P+GAV V + ++RA N L D TAHAEILA+R +L L L VT+ Sbjct: 22 DVPIGAVVVGADGTELARAVNAREALGDPTAHAEILALRAAAGVLGDGWRLEGATLAVTV 81 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ LAR+ RL +GA PK G + + +H PE+ G+ + Sbjct: 82 EPCTMCAGALVLARVGRLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLAEECAAP 141 Query: 141 IQDFFKERR 149 ++ FF +R Sbjct: 142 LEAFFARQR 150 >gi|168039996|ref|XP_001772482.1| predicted protein [Physcomitrella patens subsp. patens] gi|162676279|gb|EDQ62764.1| predicted protein [Physcomitrella patens subsp. patens] Length = 353 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 27/169 (15%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A EA+ A R E+PVG V V + ++I R N E ++ T HAE++AI M Sbjct: 167 KFMKLAFIEAREALARLEVPVGCVIVNDGEVIGRGSNCTNETRNATRHAEMVAIDMVLSK 226 Query: 66 LS-----------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E + DLYVT EPC MCAAA+SL+ R++YYG N + GG + Sbjct: 227 WQQLSATPNVNPSTEGFQQCDLYVTCEPCIMCAAALSLSGFRKIYYGCDNERFGGCGSVL 286 Query: 115 QFYTLA----TCHHS------------PEIYPGISEQRSRQIIQDFFKE 147 ++ H+ E G + +++ F+++ Sbjct: 287 DIHSDGCAPCGLSHNEAEEHEEQKTKGFECVGGFMADEAVNLLRGFYEQ 335 >gi|213965664|ref|ZP_03393857.1| tRNA-specific adenosine deaminase [Corynebacterium amycolatum SK46] gi|213951615|gb|EEB63004.1| tRNA-specific adenosine deaminase [Corynebacterium amycolatum SK46] Length = 147 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+ EA + ++PVGAV V K++ R NR D AHAE++A+R R + Sbjct: 1 MRLAIAEAAH-TAPGDVPVGAVVVDAEGKVVGRGSNRREADGDPLAHAEVIALREATRAV 59 Query: 67 SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L VTLEPC MCA A + R+ R+ +GA +PK G + + Sbjct: 60 GDGWRLEQCTLVVTLEPCVMCAGACVMGRVGRVVFGAWSPKTGACGSIADVIRDPAHAFT 119 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P++ G+ +++FF+ +R Sbjct: 120 PQVRGGVLADECSVYLREFFERQR 143 >gi|124023348|ref|YP_001017655.1| cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9303] gi|123963634|gb|ABM78390.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9303] Length = 163 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M L A+ E+PV AV + + + I N+ +D HAE++A+R + Sbjct: 6 WMLRLLTRAKQLGGLGEVPVSAVVLDADGRCIGHGSNQRHRGRDPLGHAELIALRQAAWL 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 S + L VTLEPC MCA A++ AR+ ++ + A +PK GG+ + + HH Sbjct: 66 RSDWRFNDCTLIVTLEPCPMCAGALTQARMGQVIFAAHDPKRGGLGSTINLGDHPSAHHK 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G+ E +RQ ++ +FK++R Sbjct: 126 MRVLGGVMEVEARQQLEAWFKQQR 149 >gi|50553008|ref|XP_503914.1| YALI0E13728p [Yarrowia lipolytica] gi|49649783|emb|CAG79507.1| YALI0E13728p [Yarrowia lipolytica] Length = 222 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 50/144 (34%), Positives = 81/144 (56%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + FM ALE+A+ + NE+PVG V V N K+I+R N + T HAE L I Sbjct: 6 EYHSGFMEEALEQAELSLNNNEVPVGCVFVHNGKVIARGMNDTNKSLCGTRHAEFLGIEH 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + +I EVDLYVT+EPC MCA+A+ +I+ +YYG +N + GG + ++ Sbjct: 66 ILKTHTADIFEEVDLYVTVEPCIMCASALRQLKIKCVYYGCANDRFGGCGSVMSIHSDKG 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 + + YPG + + +++ F+ Sbjct: 126 VDPTYKAYPGFYREEAIMLLRRFY 149 >gi|238855364|ref|ZP_04645676.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 269-3] gi|260664920|ref|ZP_05865771.1| tRNA-adenosine deaminase [Lactobacillus jensenii SJ-7A-US] gi|282934594|ref|ZP_06339841.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1] gi|238832025|gb|EEQ24350.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 269-3] gi|260561403|gb|EEX27376.1| tRNA-adenosine deaminase [Lactobacillus jensenii SJ-7A-US] gi|281301346|gb|EFA93643.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1] Length = 176 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 44/127 (34%), Positives = 73/127 (57%), Gaps = 1/127 (0%) Query: 24 IPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 +P+GA+ V + ++I R NR T HAEILAI C+ L+ L + L+VTLEP Sbjct: 27 VPIGAIVVAPDGQVIGRGYNRRELDNIATHHAEILAINEACKNLNSWRLIDCSLFVTLEP 86 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCA AI AR++ ++YGA + K G + + + +H P++ G+ +++ ++ Sbjct: 87 CAMCAGAIINARLKEVFYGAPDHKAGASGSVVDLFAVEKFNHHPQVIRGLYSEKASNMLT 146 Query: 143 DFFKERR 149 +FF+ R Sbjct: 147 NFFRAIR 153 >gi|71892310|ref|YP_278044.1| tRNA-specific adenosine deaminase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796416|gb|AAZ41167.1| tRNA-specific adenosine deaminase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 155 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 53/146 (36%), Positives = 73/146 (50%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 ++M A+ A +A + EI VGAV + N K+IS N + D +AHAEI+A+R G Sbjct: 8 DTIWMRHAIALAAHAEIIGEISVGAVLIQNGKLISYGWNSSIICHDPSAHAEIVALRTGG 67 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 ++L L LYVTLEPC MC AI AR+ RL GA N K + Sbjct: 68 KVLGNYRLLGTTLYVTLEPCMMCIGAIIHARVYRLVCGAKNSKTEQRSWLKNTLRHPMNN 127 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ E+ + FFK +R Sbjct: 128 HHVFLTTGVLEKECAYQLNKFFKRQR 153 >gi|119026595|ref|YP_910440.1| cytidine and deoxycytidylate deaminase [Bifidobacterium adolescentis ATCC 15703] gi|118766179|dbj|BAF40358.1| possible cytidine and deoxycytidylate deaminase [Bifidobacterium adolescentis ATCC 15703] Length = 157 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 43/129 (33%), Positives = 60/129 (46%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV + + ++I R N D AHAE+ A+ L L + L VTL Sbjct: 29 GEVPVGAVVLAADGRVIGRGRNLRETHADPLAHAEVKAMAEAAASLDTWNLADCTLVVTL 88 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A I R+ +GA + K G + PE+ G+ E ++ Sbjct: 89 EPCPMCAGACLQTHIGRIVFGAWDAKLGACGSVWDIPRDPHVGLVPEVIGGVREAECGRL 148 Query: 141 IQDFFKERR 149 + DFF RR Sbjct: 149 MTDFFARRR 157 >gi|313472533|ref|ZP_07813023.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus jensenii 1153] gi|313448996|gb|EEQ68969.2| cytidine/deoxycytidylate deaminase family protein [Lactobacillus jensenii 1153] Length = 160 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 44/127 (34%), Positives = 73/127 (57%), Gaps = 1/127 (0%) Query: 24 IPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 +P+GA+ V + ++I R NR T HAEILAI C+ L+ L + L+VTLEP Sbjct: 27 VPIGAIVVAPDGQVIGRGYNRRELDNIATHHAEILAINEACKNLNSWRLIDCSLFVTLEP 86 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCA AI AR++ ++YGA + K G + + + +H P++ G+ +++ ++ Sbjct: 87 CAMCAGAIINARLKEVFYGAPDHKAGASGSVVDLFAVEKFNHHPQVIRGLYSEKASNMLT 146 Query: 143 DFFKERR 149 +FF+ R Sbjct: 147 NFFRAIR 153 >gi|269793794|ref|YP_003313249.1| tRNA-adenosine deaminase [Sanguibacter keddieii DSM 10542] gi|269095979|gb|ACZ20415.1| tRNA-adenosine deaminase [Sanguibacter keddieii DSM 10542] Length = 147 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 47/150 (31%), Positives = 66/150 (44%), Gaps = 15/150 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL--------NNKIISRAGNRNRELKDVTAHAEILAI 59 M A++EA+ A ++ + +I R N D TAHAE+LA+ Sbjct: 1 MGLAIDEARLALETGDV-------PVGAVVVGPDGTVIGRGHNAREAAGDPTAHAEVLAL 53 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + L + L L VTLEPC MCA A LAR+ RL GA + K G + Sbjct: 54 REAAQTLGEWRLTGCTLVVTLEPCVMCAGATMLARVPRLVLGAWDDKAGATGSMWDLVRD 113 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ E ++ DFF + R Sbjct: 114 RRSTHRVEVVGGVREAECAALLLDFFADHR 143 >gi|258543612|ref|YP_003189045.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-01] gi|256634690|dbj|BAI00666.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-01] gi|256637746|dbj|BAI03715.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-03] gi|256640800|dbj|BAI06762.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-07] gi|256643855|dbj|BAI09810.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-22] gi|256646910|dbj|BAI12858.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-26] gi|256649963|dbj|BAI15904.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-32] gi|256652953|dbj|BAI18887.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256656007|dbj|BAI21934.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-12] Length = 151 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 51/131 (38%), Positives = 84/131 (64%), Gaps = 1/131 (0%) Query: 20 LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78 E+PVGAV + N ++++AGNR EL+D +AHAE+L +R + + L + L+V Sbjct: 19 ENGEVPVGAVLLDSNGNVLAQAGNRVEELRDPSAHAEMLVMREAVQQRQGQKLADCTLFV 78 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 +LEPC MCAAA++ R+ R+ +GA +PKGGG+E+G + H E+ G+ EQ + Sbjct: 79 SLEPCPMCAAAMAHFRLGRVVFGAYDPKGGGVEHGARLPYRPETLHRMEVIGGVREQEAA 138 Query: 139 QIIQDFFKERR 149 ++++ FF++ R Sbjct: 139 EMLKAFFQKLR 149 >gi|109072525|ref|XP_001091638.1| PREDICTED: tRNA-specific adenosine deaminase 2 isoform 1 [Macaca mulatta] Length = 191 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 8/154 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 20 EETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 79 Query: 62 ---GCRILS---QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 CR E+ LYVT+EPC MCAAA+ L +I + YG N + GG + Sbjct: 80 VLDWCRRSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 139 Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 140 IASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173 >gi|220934212|ref|YP_002513111.1| tRNA-specific adenosine deaminase [Thioalkalivibrio sp. HL-EbGR7] gi|219995522|gb|ACL72124.1| tRNA-specific adenosine deaminase [Thioalkalivibrio sp. HL-EbGR7] Length = 162 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 76/148 (51%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M ALE A A E+PVGAV V + +++ N D TAHAEI A+R Sbjct: 10 DEDQHWMRHALELAARAEAAGEVPVGAVLVRDGELLGEGCNGPIAAHDPTAHAEIAALRA 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + LP LYVTLEPC MC A+ AR+ RL YGA++PK G + + Sbjct: 70 AAARVGNYRLPGATLYVTLEPCPMCVGAMIHARVARLVYGAADPKTGAVGGALDLLGHPS 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + + ++ FF+ RR Sbjct: 130 HNHRIEVTGGVLAETCAEQLRAFFRTRR 157 >gi|114327121|ref|YP_744278.1| tRNA-specific adenosine deaminase [Granulibacter bethesdensis CGDNIH1] gi|114315295|gb|ABI61355.1| tRNA-specific adenosine deaminase [Granulibacter bethesdensis CGDNIH1] Length = 178 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 58/128 (45%), Positives = 81/128 (63%), Gaps = 1/128 (0%) Query: 23 EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV + ++++A N D +AHAE+LA+R + L L DLYVTLE Sbjct: 51 EVPVGAVVISPEGYLLAQAHNLTEANHDASAHAEMLAMREAAKRLGSTRLIGCDLYVTLE 110 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA A S RIRR+ +GA +PKGGGIE+G + ++CHH PEI G+ E + ++ Sbjct: 111 PCPMCAQAASHFRIRRIIFGAYDPKGGGIEHGARVLNASSCHHQPEIIGGVRETEAVALL 170 Query: 142 QDFFKERR 149 + FF+ RR Sbjct: 171 RSFFQARR 178 >gi|83591989|ref|YP_425741.1| tRNA-adenosine deaminase [Rhodospirillum rubrum ATCC 11170] gi|83574903|gb|ABC21454.1| tRNA-adenosine deaminase [Rhodospirillum rubrum ATCC 11170] Length = 159 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 53/129 (41%), Positives = 77/129 (59%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV + ++ NR D TAHAEILAIR C LP+ L+VTL Sbjct: 31 GEVPVGAVITDAGGRPLAACANRTETDHDPTAHAEILAIRAACARRGDARLPDCTLWVTL 90 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA+AI AR+ R+ +GA +PKGG +++G + + C H PE+ G++E + + Sbjct: 91 EPCPMCASAIVHARLARVIFGAYDPKGGAVDHGVRLFAHPGCLHRPEVIGGMAESAAATL 150 Query: 141 IQDFFKERR 149 ++ FF+ R Sbjct: 151 LRGFFQALR 159 >gi|78184835|ref|YP_377270.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. CC9902] gi|78169129|gb|ABB26226.1| tRNA-adenosine deaminase [Synechococcus sp. CC9902] Length = 147 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M L+ AQ L E+PV AV + N + I NR +D HAE++A++ +L Sbjct: 1 MKVLLQRAQVNGLSGEVPVAAVVLDANGRAIGHGRNRRETKQDPLGHAELVALQQAALVL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L VTLEPC MCA A+ AR+ + +GA + K GG+ T + HH Sbjct: 61 GDWRFNQCCLIVTLEPCPMCAGALVQARMGTVVFGAHDRKRGGLGGTMNLATHTSAHHKM 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E + ++ +FK+RR Sbjct: 121 TVIGGVMEAEASTQLEQWFKQRR 143 >gi|311741106|ref|ZP_07714931.1| cytidine and deoxycytidylate deaminase [Corynebacterium pseudogenitalium ATCC 33035] gi|311303908|gb|EFQ79986.1| cytidine and deoxycytidylate deaminase [Corynebacterium pseudogenitalium ATCC 33035] Length = 143 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 50/144 (34%), Positives = 72/144 (50%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+ A+ A ++PVGAV ++ NR EL D TAHAE+ AIR R+ Sbjct: 1 MRRALDVAKRAPA-GDVPVGAVLYDAAGTELATGVNRREELADPTAHAEVEAIRQAVRVH 59 Query: 67 SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L +L VTLEPC MCA A+ AR+ + +GA PK G + T + Sbjct: 60 GDGWRLSGCELVVTLEPCAMCAGALQAARVSSVVFGAFEPKTGACGSLIDVLRAPTAPFT 119 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P++ G+ E ++++FF R Sbjct: 120 PQVRGGVLEGECAGLLRNFFDGLR 143 >gi|254474984|ref|ZP_05088370.1| cytosine deaminase [Ruegeria sp. R11] gi|214029227|gb|EEB70062.1| cytosine deaminase [Ruegeria sp. R11] Length = 152 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 74/143 (51%), Positives = 99/143 (69%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA+ AA R E+PVGA + + ++++AGNR REL D TAHAE+L IR C + Sbjct: 7 MDVALSEARAAAERGEVPVGAALIAPDGTVVAQAGNRTRELSDPTAHAEVLVIREACAAI 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPC MCAAAI+ ARIRR+YYGAS+PK GG+ +G ++ HH+P Sbjct: 67 GSERLNGYDLYVTLEPCAMCAAAIAAARIRRVYYGASDPKSGGVAHGACVFSHPQAHHAP 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GIS + ++++DFF +R Sbjct: 127 EVYEGISAAPAERLLRDFFAAKR 149 >gi|85057886|ref|YP_456802.1| cytosine deaminase [Aster yellows witches'-broom phytoplasma AYWB] gi|42632638|gb|AAS22250.1| cytosine deaminase [Aster yellows witches'-broom phytoplasma] gi|84789991|gb|ABC65723.1| cytosine deaminase [Aster yellows witches'-broom phytoplasma AYWB] Length = 161 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 82/148 (55%), Gaps = 1/148 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM AL+EAQ A L+ E+P+GA+AVLN KII+RA N K HAE LA+ Sbjct: 6 QQHIFFMKEALKEAQKAYLKEEVPIGAIAVLNQKIIARAHNNRNTKKLFFGHAEFLALIK 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + ++ L +V LYVTLEPC MC AI A I+ LYYG S K + + + Sbjct: 66 AGKKINSRFLNDVSLYVTLEPCLMCTGAIIQAGIKNLYYGTSIEKSYSFNDMSSIQNMPF 125 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 I G+ Q S Q+++ FF+E R Sbjct: 126 MD-KLNIQSGLLAQESIQLLKKFFQELR 152 >gi|33862872|ref|NP_894432.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9313] gi|33634788|emb|CAE20774.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9313] Length = 163 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 1/144 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M L A+ E+PV AV + + + I N+ +D HAE++A+R + Sbjct: 6 WMLRLLTRAKQLGDFGEVPVSAVVLDADGRCIGHGSNQRHRRRDPLGHAELIALRQAAWL 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 S + L VTLEPC MCA A++ AR+ ++ + A +PK GG+ + + HH Sbjct: 66 RSDWRFNDCTLIVTLEPCPMCAGALTQARMGQVIFAAHDPKRGGLGSTIHLGEHPSAHHK 125 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G+ E +RQ ++ +FK++R Sbjct: 126 MRVLGGVMEVEARQQLEAWFKQQR 149 >gi|85375364|ref|YP_459426.1| nitrogen fixation protein [Erythrobacter litoralis HTCC2594] gi|84788447|gb|ABC64629.1| nitrogen fixation protein [Erythrobacter litoralis HTCC2594] Length = 142 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 74/142 (52%), Positives = 94/142 (66%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA+ AA E+P+GAV V K+I A N R D TAHAEI AIR + L Sbjct: 1 MRLALEEARKAADAGEVPIGAVVVKGEKVIVAAHNSPRTDHDPTAHAEIAAIRAAAKALG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 QE L DL+VTLEPC MCA AIS ARI RLYY AS+PKGG +E+G + + + C H+PE Sbjct: 61 QERLEGCDLWVTLEPCAMCAGAISHARIARLYYAASDPKGGAVEHGAKVFDHSQCLHAPE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G+ E + +++ FF+ERR Sbjct: 121 VYSGMGEDEAADMLRGFFRERR 142 >gi|260909419|ref|ZP_05916126.1| cytidine/deoxycytidylate deaminase [Prevotella sp. oral taxon 472 str. F0295] gi|260636435|gb|EEX54418.1| cytidine/deoxycytidylate deaminase [Prevotella sp. oral taxon 472 str. F0295] Length = 155 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 55/146 (37%), Positives = 78/146 (53%), Gaps = 5/146 (3%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M AL EAQ A + E+P+GAV ++++RA N L DVTAHAE+ AI Sbjct: 14 DEQMMRKALAEAQQALAQGEVPIGAVIACKGRVVARAHNLTETLCDVTAHAEMQAITAAA 73 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 +L + LPE LYVT+EPC MCA A A++ R+ YG + K G + + H Sbjct: 74 NMLGGKYLPECTLYVTVEPCPMCAGACGWAQLGRIVYGTRDEKRG-----YERFAPNVLH 128 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 + G+ E+ RQ+++DFF R Sbjct: 129 AKATVTAGVLEEECRQLMKDFFSGLR 154 >gi|318041317|ref|ZP_07973273.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. CB0101] Length = 178 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 1/145 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 + ++M L A+ EIPV AV + + + NR + HAE++A++ Sbjct: 13 EHILWMQRLLRRAEAVGCEGEIPVAAVVLDAQGRAVGWGSNRRERDQQPLGHAELMALQQ 72 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R+ + L VTLEPC MCA A+ AR+ ++ +GA +PK GG+ T + Sbjct: 73 AARLRGDWRFNDCTLLVTLEPCPMCAGALVQARVGQVVFGAHDPKRGGLGGVLDLSTSPS 132 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFK 146 HHS + G+ +R ++ +FK Sbjct: 133 AHHSMLVVGGVEAERCATQLERWFK 157 >gi|21322992|dbj|BAB97621.1| Cytosine/adenosine deaminases [Corynebacterium glutamicum ATCC 13032] Length = 139 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 2/131 (1%) Query: 21 RNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYV 78 ++PVGAV +I++ A NR +D TAHAEI+A+R R S L + V Sbjct: 9 EGDVPVGAVIYAPTGEILATATNRREADRDPTAHAEIIALRRAARRFSDGWRLSDCTAVV 68 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 TLEPC+MCA A+ ARI R+ +GA P+ G + H E+ GI E Sbjct: 69 TLEPCSMCAGALVGARIGRIVFGAFEPRTGACGSVFDVVRDPAVLHKVEVSGGILEPECA 128 Query: 139 QIIQDFFKERR 149 ++ +FF+ R Sbjct: 129 ALMTEFFELHR 139 >gi|323507722|emb|CBQ67593.1| related to TAD2-tRNA-specific adenosine deaminase 2 [Sporisorium reilianum] Length = 1276 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 18/162 (11%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL AQ A NE+PVG V V ++I+R NR EL + T HAE+ AI Sbjct: 940 EEDLKWMREALAMAQEALEANEVPVGGVFVRKGQVIARGRNRTNELLNATRHAELEAIDH 999 Query: 62 GCRIL----------------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 I+ + LYVT+EPC MC AA+ I R+ +GA N Sbjct: 1000 ILSIMPPSAPDFAVAPHSGPEGDNPFKDTTLYVTIEPCIMCGAALRQIGIGRVVFGAGNE 1059 Query: 106 KGGGIENGTQFYTLATCHHSP--EIYPGISEQRSRQIIQDFF 145 + GG + + SP E G + +++ F+ Sbjct: 1060 RFGGNGSVLGLHDDDAIVSSPGYESVGGYLRDEAIMMLRRFY 1101 >gi|302530974|ref|ZP_07283316.1| cytidine and deoxycytidylate deaminase [Streptomyces sp. AA4] gi|302439869|gb|EFL11685.1| cytidine and deoxycytidylate deaminase [Streptomyces sp. AA4] Length = 155 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 77/143 (53%), Gaps = 4/143 (2%) Query: 9 SCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 AL+ A+ ++P+GAV + + ++ A N EL D TAHAEILA+R R Sbjct: 11 RAALDAARAPGA--DVPIGAVVFDPDGRPLAAARNARVELADPTAHAEILALRAAAREFG 68 Query: 68 Q-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA A+ LAR+ RL +GA PK G + + +H P Sbjct: 69 DGWRLEGCTLAVTLEPCTMCAGALVLARVARLVFGAWEPKTGAVSSLWDVVRDRRLNHRP 128 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E++ G+ E +++ +F +RR Sbjct: 129 EVHGGVLESDCAALLEAYFADRR 151 >gi|58268162|ref|XP_571237.1| tRNA specific adenosine deaminase [Cryptococcus neoformans var. neoformans JEC21] gi|134113420|ref|XP_774735.1| hypothetical protein CNBF4140 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257379|gb|EAL20088.1| hypothetical protein CNBF4140 [Cryptococcus neoformans var. neoformans B-3501A] gi|57227472|gb|AAW43930.1| tRNA specific adenosine deaminase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 239 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 3/140 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ A +E+PVG V V + I+RA NR E ++ T HAE+ AI Sbjct: 1 MREALIMAEEALTNDEVPVGCVFVKGGQAIARARNRTNEWRNATLHAELEAIDHLLPSHP 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC--HHS 125 L + LYVT+EPC MCA+A+ I R+ YG N + GG + H + Sbjct: 61 AP-LSTITLYVTVEPCVMCASALRQVGIGRVVYGCGNDRFGGCGSVIPVNNSPRLDSHPA 119 Query: 126 PEIYPGISEQRSRQIIQDFF 145 G + + +++ F+ Sbjct: 120 YVAVGGFYREEAIMLLRRFY 139 >gi|283457044|ref|YP_003361608.1| tRNA-specific adenosine deaminase [Bifidobacterium dentium Bd1] gi|283103678|gb|ADB10784.1| MesJ tRNA-specific adenosine deaminase [Bifidobacterium dentium Bd1] Length = 145 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV + ++I R N +D AHAE+ A+ L L + L VTL Sbjct: 15 GEVPVGAVVLDAAGQVIGRGRNLREADRDPLAHAEVKAMTEAAHALGTWNLADCTLIVTL 74 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A I R+ +GA + K G + PE+ G+ E +I Sbjct: 75 EPCPMCAGACLQTHIGRIVFGAWDAKLGACGSVWDIPRDPHIGSVPEVIGGMHESECARI 134 Query: 141 IQDFFKERR 149 + DFF ++R Sbjct: 135 LTDFFTDKR 143 >gi|183985263|ref|YP_001853554.1| cytidine/deoxycytidylate deaminase [Mycobacterium marinum M] gi|183178589|gb|ACC43699.1| cytidine/deoxycytidylate deaminase [Mycobacterium marinum M] Length = 152 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80 ++P+GAV + + ++RA N EL D TAHAEILA+R R+L L L VT+ Sbjct: 22 DVPIGAVVISADGTELARAVNAREELGDPTAHAEILALRAAARVLGDGWRLEGATLAVTV 81 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ LAR+ RL +GA PK G + + +H P++ G+ Q Sbjct: 82 EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPQVRGGVLAQECAAP 141 Query: 141 IQDFFKERR 149 +++FF +R Sbjct: 142 LEEFFGRQR 150 >gi|73667189|ref|YP_303205.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Ehrlichia canis str. Jake] gi|72394330|gb|AAZ68607.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Ehrlichia canis str. Jake] Length = 139 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 77/142 (54%), Positives = 99/142 (69%), Gaps = 4/142 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ +AQ +E+PVGAV V N+++IS + N N + D TAHAEILAIR C+ILS Sbjct: 1 MKLAISKAQE--DLSEVPVGAVIVYNDEVISSSNNSNIQNTDPTAHAEILAIREACKILS 58 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 +IL + D+YVTLEPC MCA AIS A++RRLY+GA N K G IENG + + CHH PE Sbjct: 59 TQILDQCDIYVTLEPCAMCAQAISFAKLRRLYFGAYNKKYGAIENGARIFQF--CHHVPE 116 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 IY GI E + ++I DFFK+ R Sbjct: 117 IYGGILENENIKLITDFFKKLR 138 >gi|161784292|sp|Q5RIV4|ADAT2_DANRE RecName: Full=tRNA-specific adenosine deaminase 2; AltName: Full=Deaminase domain-containing protein 1; AltName: Full=tRNA-specific adenosine-34 deaminase subunit ADAT2 Length = 214 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 8/151 (5%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM--- 61 +M+ A + A A E+PVG + V NN+II + N E K+ T HAE++A+ Sbjct: 22 QTWMAKAFDMAVEALENGEVPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLD 81 Query: 62 GCR---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 CR +E+ + LYVT+EPC MCAAA+ L RI + YG N + GG + + Sbjct: 82 WCRLREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGGCGSVLDVSS 141 Query: 119 LATCH--HSPEIYPGISEQRSRQIIQDFFKE 147 H S + G + + ++++ F+K+ Sbjct: 142 DHLPHTGTSFKCIAGYRAEEAVEMLKTFYKQ 172 >gi|171741935|ref|ZP_02917742.1| hypothetical protein BIFDEN_01034 [Bifidobacterium dentium ATCC 27678] gi|306824050|ref|ZP_07457423.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) [Bifidobacterium dentium ATCC 27679] gi|309800761|ref|ZP_07694896.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bifidobacterium dentium JCVIHMP022] gi|171277549|gb|EDT45210.1| hypothetical protein BIFDEN_01034 [Bifidobacterium dentium ATCC 27678] gi|304552703|gb|EFM40617.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) [Bifidobacterium dentium ATCC 27679] gi|308222606|gb|EFO78883.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bifidobacterium dentium JCVIHMP022] Length = 151 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV + ++I R N +D AHAE+ A+ L L + L VTL Sbjct: 21 GEVPVGAVVLDAAGQVIGRGRNLREADRDPLAHAEVKAMTEAAHALGTWNLADCTLIVTL 80 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A I R+ +GA + K G + PE+ G+ E +I Sbjct: 81 EPCPMCAGACLQTHIGRIVFGAWDAKLGACGSVWDIPRDPHIGSVPEVIGGMHESECARI 140 Query: 141 IQDFFKERR 149 + DFF ++R Sbjct: 141 LTDFFTDKR 149 >gi|254281607|ref|ZP_04956575.1| tRNA-specific adenosine deaminase [gamma proteobacterium NOR51-B] gi|219677810|gb|EED34159.1| tRNA-specific adenosine deaminase [gamma proteobacterium NOR51-B] Length = 164 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 56/139 (40%), Positives = 72/139 (51%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 MS ALE+A AA + E+PVGAV V++ K+++ AGN D TAHAEILA+R Sbjct: 8 DREMMSLALEKAAMAAAQGEVPVGAVVVMDGKVVATAGNGQIGDCDPTAHAEILALRDAA 67 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R + L LY TLEPCTMC A+ ARI RL YGA PK G + + + Sbjct: 68 RAIRNYRLAGATLYATLEPCTMCCGALVHARIGRLVYGALEPKAGAVVSTGAALDNPALN 127 Query: 124 HSPEIYPGISEQRSRQIIQ 142 H G+ S + Sbjct: 128 HRVTHAGGLLADESAMQLS 146 >gi|321260564|ref|XP_003195002.1| tRNA specific adenosine deaminase [Cryptococcus gattii WM276] gi|317461474|gb|ADV23215.1| tRNA specific adenosine deaminase, putative [Cryptococcus gattii WM276] Length = 239 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 3/140 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A+ A +E+PVG V V + I+RA NR E ++ T HAE+ AI Sbjct: 1 MREALIMAEEALSNDEVPVGCVFVKGGQAIARARNRTNEWRNATLHAELEAIDHLLPSHP 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC--HHS 125 L + LYVT+EPC MCA+A+ I R+ YG N + GG + H + Sbjct: 61 AP-LSTITLYVTVEPCVMCASALRQVGIGRVVYGCGNDRFGGCGSVIPVNNSPRLDSHPA 119 Query: 126 PEIYPGISEQRSRQIIQDFF 145 G + + +++ F+ Sbjct: 120 YVAVGGFYREEAIMLLRRFY 139 >gi|330817316|ref|YP_004361021.1| CMP/dCMP deaminase, zinc-binding protein [Burkholderia gladioli BSR3] gi|327369709|gb|AEA61065.1| CMP/dCMP deaminase, zinc-binding protein [Burkholderia gladioli BSR3] Length = 217 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 51/144 (35%), Positives = 75/144 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL A+ A E+PVGAV V +++I+R N D +AHAE+ A+R Sbjct: 32 ERDRRYMRMALAAAEAARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 91 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LP +LYVTLEPC MC+ AI ARI R+ YGA +PK G + Sbjct: 92 AAQALGNYRLPGCELYVTLEPCLMCSGAIMHARIARVVYGAPDPKTGACGGVVDAFANPQ 151 Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145 +H + G+ + ++ FF Sbjct: 152 LNHHTSVTGGVLAEECGDALRSFF 175 >gi|295698536|ref|YP_003603191.1| tRNA-specific adenosine deaminase [Candidatus Riesia pediculicola USDA] gi|291157478|gb|ADD79923.1| tRNA-specific adenosine deaminase [Candidatus Riesia pediculicola USDA] Length = 171 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 13/157 (8%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +KK +M+ +L+ A+ + + EIP+GAV + + I++ +GN D +AHAEI+ IR Sbjct: 12 LKKDFFWMNKSLDLAKKSEILGEIPIGAVLIYQDNIVASSGNEVILRNDPSAHAEIIVIR 71 Query: 61 MGCRILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 G + L E + +YVT+ PC MC AI +RI R+ YG+ N K N F+ Sbjct: 72 EGAKHFKNYRLKENLTIYVTIFPCIMCMGAIFQSRISRVVYGSENYK-----NNLSFFLF 126 Query: 120 ATCH-------HSPEIYPGISEQRSRQIIQDFFKERR 149 + +Y GI + I+++FFK+RR Sbjct: 127 EKNNTNISMNYGHITVYGGILSRSCSSILKNFFKKRR 163 >gi|300780042|ref|ZP_07089898.1| cytidine and deoxycytidylate deaminase [Corynebacterium genitalium ATCC 33030] gi|300534152|gb|EFK55211.1| cytidine and deoxycytidylate deaminase [Corynebacterium genitalium ATCC 33030] Length = 151 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 2/141 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+E A+ +IPVGAV + + I+ NR +D HAE++ R + L Sbjct: 1 MRRAIEVART-TPIGDIPVGAVLYGPDGEEIATGTNRRETDRDPVGHAEVVVTRKAAQAL 59 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L +L VTLEPCTMCA AI AR++ L +GA PK G + + H+ Sbjct: 60 GTWRLDGCELVVTLEPCTMCAGAILGARVQSLVFGAYEPKTGAVGSLIDVLRDPPHLHTV 119 Query: 127 EIYPGISEQRSRQIIQDFFKE 147 E+ G+ E + +++DFF Sbjct: 120 EVRGGVLETETASLMRDFFAR 140 >gi|289640846|ref|ZP_06473017.1| CMP/dCMP deaminase zinc-binding [Frankia symbiont of Datisca glomerata] gi|289509422|gb|EFD30350.1| CMP/dCMP deaminase zinc-binding [Frankia symbiont of Datisca glomerata] Length = 157 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 3/144 (2%) Query: 1 MKKGNVFMSCALEEAQNAAL--RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57 M K +M ALE A+ + PVGAV + + I+ A + + D TAHAEI Sbjct: 1 MAKYEPWMRRALEMARALPDPGAGDPPVGAVIYGPDGREITAAHHDRQRTADPTAHAEIT 60 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 +R R L L L TLEP M A A+ LAR+ RL G+ + + G + + Sbjct: 61 VLRRAGRALGTWKLDGCTLVTTLEPGVMAAGAVVLARMPRLVIGSWDERNGAVCSQWDLV 120 Query: 118 TLATCHHSPEIYPGISEQRSRQII 141 +H E+ P + + ++ Sbjct: 121 RDPRLNHFVEVIPEVLKAECDALL 144 >gi|90419974|ref|ZP_01227883.1| cytidine/deoxycytidylate deaminase [Aurantimonas manganoxydans SI85-9A1] gi|90336015|gb|EAS49763.1| cytidine/deoxycytidylate deaminase [Aurantimonas manganoxydans SI85-9A1] Length = 202 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 74/128 (57%), Positives = 96/128 (75%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 NE PVGAV V ++II+R GN R+ D TAHAEI+AIR L E LP+ DLYVTLE Sbjct: 74 NETPVGAVIVRGDEIIARGGNETRQRNDPTAHAEIVAIRAAAARLGSERLPDCDLYVTLE 133 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCAAAIS ARIRRLYYGA++PKGGG++ G +F++ TCHH+PE+Y I+ + S +++ Sbjct: 134 PCAMCAAAISFARIRRLYYGAADPKGGGVDAGPRFFSQPTCHHAPEVYSDIAARESAELL 193 Query: 142 QDFFKERR 149 + FF+ RR Sbjct: 194 RGFFQARR 201 >gi|38232870|ref|NP_938637.1| putative cytosine deaminase [Corynebacterium diphtheriae NCTC 13129] gi|38199128|emb|CAE48752.1| Putative cytosine deaminase [Corynebacterium diphtheriae] Length = 147 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+ A +IPVGA+ + I+ R NR + HAEI+AI C Sbjct: 2 MREAITLAHTTPPA-DIPVGAIIYGPDGTILGRGTNRRETDHNPLGHAEIMAITQACTQR 60 Query: 67 SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L VTLEPCTMCA A+ +RI + +GA PK G + H+ Sbjct: 61 GDGWRLTDCTLAVTLEPCTMCAGALVGSRIGHIIFGAYEPKTGACGSAFDVVRDPAVLHT 120 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 ++ GI E +++ +FF R Sbjct: 121 VQVRGGILEAECAELMTNFFGGLR 144 >gi|330805063|ref|XP_003290507.1| hypothetical protein DICPUDRAFT_81234 [Dictyostelium purpureum] gi|325079386|gb|EGC32989.1| hypothetical protein DICPUDRAFT_81234 [Dictyostelium purpureum] Length = 259 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 50/151 (33%), Positives = 75/151 (49%), Gaps = 7/151 (4%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A++E + A E+PV V V NN+II+R N+ K+ T HAE+ A Sbjct: 41 QNHIKFMKEAVKEGEKALKEGEVPVACVIVHNNQIIARGSNKTNIKKNGTRHAELEAFDQ 100 Query: 62 ------GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +L E DLYVT+EPC MCA A+SLA+I R+++G N K GG + Sbjct: 101 IFLNKELNERFKDTLLVECDLYVTVEPCLMCAGALSLAKINRVFFGCHNDKFGGNGSVYS 160 Query: 116 FYTLATCHHSP-EIYPGISEQRSRQIIQDFF 145 + P G+ + + ++Q F+ Sbjct: 161 LNLAPISNGKPYNAISGLLKDDAIHLLQLFY 191 >gi|254454396|ref|ZP_05067833.1| cytosine deaminase [Octadecabacter antarcticus 238] gi|198268802|gb|EDY93072.1| cytosine deaminase [Octadecabacter antarcticus 238] Length = 145 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 70/130 (53%), Positives = 90/130 (69%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+PVGAV + +I+ AGNR REL D TAHAEILAIR C L QE L D+YVT Sbjct: 14 RGEVPVGAVVIGPTGLVIATAGNRTRELNDPTAHAEILAIRAACAALGQERLTGHDIYVT 73 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCAAAI+ AR+ RLYYGAS+PK GG+ + ++ CHH+PE+Y G+S + S Sbjct: 74 LEPCPMCAAAIANARLARLYYGASDPKSGGVAQPPRVFSHPQCHHTPEVYDGLSAETSET 133 Query: 140 IIQDFFKERR 149 +++ FF +R Sbjct: 134 LLKSFFAAKR 143 >gi|260436012|ref|ZP_05789982.1| tRNA-adenosine deaminase [Synechococcus sp. WH 8109] gi|260413886|gb|EEX07182.1| tRNA-adenosine deaminase [Synechococcus sp. WH 8109] Length = 167 Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats. Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 3/147 (2%) Query: 2 KKGNV--FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILA 58 ++ +M L+ A+ A E+PV AV + + I NR + +D HAE++A Sbjct: 13 QRDEFTRWMDVLLQRAEEAGAEGEVPVAAVILDGQGRAIGHGRNRRQNDRDPLGHAELVA 72 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 ++ + L VTLEPC MCA A+ AR+ + + AS+PK GG+ T Sbjct: 73 LQQAAIVQDDWRFNNCTLIVTLEPCPMCAGALVQARMGTVIFAASDPKRGGLGGSLDLST 132 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145 A+ HH ++ G+ E +R+ ++ +F Sbjct: 133 HASAHHHMKVIEGVREPEAREQLESWF 159 >gi|227502417|ref|ZP_03932466.1| nucleoside deaminase [Corynebacterium accolens ATCC 49725] gi|306834972|ref|ZP_07468023.1| tRNA-specific adenosine deaminase [Corynebacterium accolens ATCC 49726] gi|227076786|gb|EEI14749.1| nucleoside deaminase [Corynebacterium accolens ATCC 49725] gi|304569138|gb|EFM44652.1| tRNA-specific adenosine deaminase [Corynebacterium accolens ATCC 49726] Length = 147 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 52/144 (36%), Positives = 72/144 (50%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A+ ++PVGAV + ++ NR +L+D TAHAEI AIR RI Sbjct: 1 MQRALAVARQTPA-GDVPVGAVLYDATGRELATGVNRREQLRDPTAHAEIEAIRQAVRIH 59 Query: 67 SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L +L VTLEPC MCA A+ ARI L +GA PK G + T + Sbjct: 60 GDGWRLIGCELVVTLEPCAMCAGALQAARISSLVFGAFEPKTGACGSLVDVLRAPTAPFT 119 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P++ G+ E+ +++ FF R Sbjct: 120 PQVRGGVLEEDCVALLEKFFTTLR 143 >gi|224002957|ref|XP_002291150.1| hypothetical protein THAPSDRAFT_34714 [Thalassiosira pseudonana CCMP1335] gi|220972926|gb|EED91257.1| hypothetical protein THAPSDRAFT_34714 [Thalassiosira pseudonana CCMP1335] Length = 171 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 57/165 (34%), Positives = 82/165 (49%), Gaps = 23/165 (13%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-------------NN-------KIISRAGNRNREL 47 M AL+EAQNA + E+P+GAV V NN +I+SRA N Sbjct: 1 MELALQEAQNAWDKGEVPIGAVIVRELLSNATAGSTVMNNLHATRSFQILSRAHNLVETN 60 Query: 48 KDVTAHAEILAIRMGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 D ++HAE+LA+R G + P LY TLEPC MC A+I RI + YGA++ + Sbjct: 61 IDASSHAELLALRQGSTKMQNWRFPPNSTLYTTLEPCPMCLASIQAFRIDNIVYGANDNR 120 Query: 107 GGGIENGTQFYTLAT--CHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + ++AT H + G+ ++ I+ FF+ERR Sbjct: 121 LGAVNTHMDLMSVATHPYHEVKSVIGGVRKEECGDILVQFFRERR 165 >gi|225055376|gb|ACN80662.1| Tsr4 [Streptomyces laurentii] Length = 142 Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 1/128 (0%) Query: 22 NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PVGAV + + +++ N D TAHAE+LA+R + L L VTL Sbjct: 15 GDVPVGAVVLAPDGSVLATGHNEREATGDPTAHAEVLALRRAAAATGEWRLTGCTLVVTL 74 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A+ AR+ R+ +GA + K G + +H PE+ G+ E Sbjct: 75 EPCVMCAGALVQARVERVVFGAFDEKAGATGSLWDLVRDRRLNHRPEVIHGVLEAECSAQ 134 Query: 141 IQDFFKER 148 + FF+ R Sbjct: 135 LTAFFRTR 142 >gi|189485590|ref|YP_001956531.1| tRNA-specific adenosine deaminase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287549|dbj|BAG14070.1| tRNA-specific adenosine deaminase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 149 Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 3/145 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+EA A E+P+GAV V +NKII+R N+ L D TAHAEI+A+R + L Sbjct: 1 MFQALKEASKARESREVPIGAVIVKDNKIIARGFNKCIALSDPTAHAEIVALRKAAKKLK 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L + Y T+EPC MCA A++ ARI+++ +GA + K +N + + Sbjct: 61 NYRLNDCYAYATIEPCLMCAGALAKARIKKIIFGAFDKKADCYKNILKTGDIKKLSRRLV 120 Query: 128 IYP---GISEQRSRQIIQDFFKERR 149 I II+DFFK+ R Sbjct: 121 IVGKKEKHLSAECANIIKDFFKKIR 145 >gi|148228295|ref|NP_001089483.1| tRNA-specific adenosine deaminase 2 [Xenopus laevis] gi|82225873|sp|Q4V7V8|ADAT2_XENLA RecName: Full=tRNA-specific adenosine deaminase 2; AltName: Full=Deaminase domain-containing protein 1; AltName: Full=tRNA-specific adenosine-34 deaminase subunit ADAT2 gi|66912051|gb|AAH97698.1| MGC115242 protein [Xenopus laevis] Length = 175 Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats. Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 8/149 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A + AQ+A E+PVG + V N+++ + N E K+ T HAE++AI Sbjct: 13 WMHKAFQMAQDALNNGEVPVGCLMVYGNQVVGKGRNEVNETKNATQHAEMVAIDQVLDWC 72 Query: 67 ------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL- 119 S ++ + LYVT+EPC MCA A+ L +I + YG N + GG + Sbjct: 73 EMNSKKSTDVFENIVLYVTVEPCIMCAGALRLLKIPLVVYGCRNERFGGCGSVLNVSGDD 132 Query: 120 -ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + G +++ ++++ F+K+ Sbjct: 133 IPDTGTKFKCIGGYQAEKAIELLKTFYKQ 161 >gi|145221806|ref|YP_001132484.1| CMP/dCMP deaminase, zinc-binding [Mycobacterium gilvum PYR-GCK] gi|315446457|ref|YP_004079336.1| tRNA-adenosine deaminase [Mycobacterium sp. Spyr1] gi|145214292|gb|ABP43696.1| tRNA-adenosine deaminase [Mycobacterium gilvum PYR-GCK] gi|315264760|gb|ADU01502.1| tRNA-adenosine deaminase [Mycobacterium sp. Spyr1] Length = 149 Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 3/149 (2%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 + AL+ A+ A R ++P+GAV ++RA N EL D TAHAEILA+R Sbjct: 2 TDEDLIRAALDAARGAGPR-DVPIGAVVFDAEGTELARAANAREELGDPTAHAEILALRA 60 Query: 62 GCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L VT+EPCTMCA A+ +AR+ R+ +GA PK G + + Sbjct: 61 AALVHGDGWRLEGATLAVTVEPCTMCAGALVMARVARVVFGAWEPKTGAVGSLWDVVRDR 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H P++ G+ E +++FF +R Sbjct: 121 RLTHRPQVRGGVLEAECAAPLEEFFARQR 149 >gi|317153179|ref|YP_004121227.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio aespoeensis Aspo-2] gi|316943430|gb|ADU62481.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio aespoeensis Aspo-2] Length = 165 Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats. Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A +A AA E P+GA + +++ A N L D TAHAE+L +R L Sbjct: 18 MDVAFAQACMAAKEGESPIGAALFAPDGALLAAARNNPVGLNDPTAHAEVLCLRQAAARL 77 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPC MC A+ AR+ + GA +P+ G + + Q + L +H Sbjct: 78 GNYRLTGTILAVTLEPCLMCTGALIHARVAGVVMGALDPRAGAVISNLQGHALPFANHRM 137 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ E+ +++ FF E+R Sbjct: 138 WFVQGVMEEECSTLLKRFFLEKR 160 >gi|131888897|ref|NP_001076566.1| tRNA-specific adenosine deaminase 2 [Danio rerio] gi|55962646|emb|CAI11650.1| novel protein [Danio rerio] gi|190337669|gb|AAI63783.1| Adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae) [Danio rerio] gi|190340014|gb|AAI63804.1| Adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae) [Danio rerio] Length = 206 Score = 170 bits (431), Expect = 9e-41, Method: Composition-based stats. Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 8/151 (5%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM--- 61 +M+ A + A A E+PVG + V NN+II + N E K+ T HAE++A+ Sbjct: 22 QTWMAKAFDMAVEALENGEVPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLD 81 Query: 62 GCR---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 CR +E+ + LYVT+EPC MCAAA+ L RI + YG N + GG + + Sbjct: 82 WCRLREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGGCGSVLDVSS 141 Query: 119 LATCH--HSPEIYPGISEQRSRQIIQDFFKE 147 H S + G + + ++++ F+K+ Sbjct: 142 DHLPHTGTSFKCIAGYRAEEAVEMLKTFYKQ 172 >gi|312137792|ref|YP_004005128.1| cmp/dcmp deaminase [Rhodococcus equi 103S] gi|325676107|ref|ZP_08155789.1| cytidine and deoxycytidylate deaminase [Rhodococcus equi ATCC 33707] gi|311887131|emb|CBH46440.1| CMP/dCMP deaminase [Rhodococcus equi 103S] gi|325553147|gb|EGD22827.1| cytidine and deoxycytidylate deaminase [Rhodococcus equi ATCC 33707] Length = 152 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80 ++PVGAV + + ++RA N D TAHAEILA+R R+ L L VTL Sbjct: 24 DVPVGAVVFDADGVELARAANAREATGDPTAHAEILALRAAARVHGDGWRLEGATLAVTL 83 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ LAR+ R+ +GA PK G + + H P++ G+ E I Sbjct: 84 EPCTMCAGALVLARVERVVFGAWEPKTGAVGSLWDVVRDRRLTHRPQVRGGVLEGECAGI 143 Query: 141 IQDFFKERR 149 ++ FF+ +R Sbjct: 144 LESFFQGQR 152 >gi|26388773|dbj|BAB32363.2| unnamed protein product [Mus musculus] Length = 191 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 8/154 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A A A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 20 QETEKWMEEATRMANEALENIEVPVGCLMVYNNEVVGKGTNEVNQTKNATRHAEMVAIDQ 79 Query: 62 GCRILSQE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 Q + LYVT+EPC MCAAA+ L +I + YG N + GG + Sbjct: 80 VLDWCHQHGQSPSTVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 139 Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 140 IASADLPNTGRPFQCIPGYRAEEAVELLKTFYKQ 173 >gi|118619510|ref|YP_907842.1| cytidine/deoxycytidylate deaminase [Mycobacterium ulcerans Agy99] gi|118571620|gb|ABL06371.1| cytidine/deoxycytidylate deaminase [Mycobacterium ulcerans Agy99] Length = 152 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80 ++P+GAV + + ++RA N EL D TAHAEILA+R R+L L L VT+ Sbjct: 22 DVPIGAVMISADGTELARAVNAREELGDPTAHAEILALRAAARVLGDGWRLEGATLAVTV 81 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ LAR+ RL +GA PK G + + +H P++ G+ Q Sbjct: 82 EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPQVRGGVLAQECAAP 141 Query: 141 IQDFFKERR 149 +++FF +R Sbjct: 142 LEEFFGRQR 150 >gi|268552503|ref|XP_002634234.1| Hypothetical protein CBG01804 [Caenorhabditis briggsae] gi|187037916|emb|CAP22833.1| hypothetical protein CBG_01804 [Caenorhabditis briggsae AF16] Length = 426 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 48/149 (32%), Positives = 82/149 (55%), Gaps = 4/149 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +F+ A A+ A ++E+PVG V V++ + I R NR E D T HAE++A+ Sbjct: 7 EDDRIFLEQAFTLAEEALNQDEVPVGCVFVVDGEEIGRGRNRVNETGDPTRHAEMVAVTE 66 Query: 62 GCRILSQEI---LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +E L + LYV+LEPC MC++A+ IR++ YGA NP+ GG+ + Sbjct: 67 IWSKYGEESNNLLKKSVLYVSLEPCIMCSSAMYQLGIRKMVYGAENPRFGGVRSVGSAEK 126 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 ++ EI G+ +RS +++ F+++ Sbjct: 127 YREENN-IEIVAGVWAERSVGMLKAFYEK 154 >gi|291397092|ref|XP_002714901.1| PREDICTED: deaminase domain containing 1-like [Oryctolagus cuniculus] Length = 192 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 8/154 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M A+ A+ A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 21 EETEKWMEEAMRMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 80 Query: 62 GCRILSQ------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + E+ LYVT+EPC MCAAA+ L +I + YG N + GG + Sbjct: 81 VLDWCRRSGKSSAEVFEHTVLYVTVEPCIMCAAALRLLKIPLVVYGCQNERFGGCGSVLN 140 Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + PG + + ++++ F+K+ Sbjct: 141 IASADLPNTGRPFQCLPGYRAEEAVEMLKTFYKQ 174 >gi|313157371|gb|EFR56794.1| cytidine and deoxycytidylate deaminase zinc-binding region [Alistipes sp. HGB5] Length = 149 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 73/148 (49%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM AL EA+ A E+P+GAV V + ++ R N L D TAHAE+ A+ Sbjct: 6 KTDEKFMRLALNEARKALQLQEVPIGAVVVADGAVVGRGHNLVETLSDPTAHAEMQALTA 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L LYVT+EPC MCA A A++ R+ +GA +PK G + Y+ Sbjct: 66 AASTLGGKYLQGCTLYVTVEPCIMCAGATGWAQVGRVVWGADDPKKG-----YRRYSETV 120 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ + +++ FF R Sbjct: 121 FHPKTTVVRGVLGEECEELMTSFFAGLR 148 >gi|269955016|ref|YP_003324805.1| CMP/dCMP deaminase zinc-binding protein [Xylanimonas cellulosilytica DSM 15894] gi|269303697|gb|ACZ29247.1| CMP/dCMP deaminase zinc-binding protein [Xylanimonas cellulosilytica DSM 15894] Length = 190 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 15/153 (9%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVL--------NNKIISRAGNRNRELKDVTAHAEI 56 + M AL EA +A ++ + +++ NR E D TAHAE+ Sbjct: 42 DALMGMALHEATHALASGDV-------PVGAVVVGPDGRLLGTGRNRREETGDPTAHAEV 94 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 LA+R + L L VTLEPC MCA A+ AR+ RL GA +PK G + Sbjct: 95 LALRQAALSRREWRLEGCTLVVTLEPCVMCAGALVAARVHRLVIGAWDPKAGATGSVWDL 154 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H+ E+ G+ E +++ FF+ R Sbjct: 155 VRDQRANHAVEVVGGVREHECGAMLRAFFESHR 187 >gi|209966841|ref|YP_002299756.1| cytidine and deoxycytidylate deaminase, putative [Rhodospirillum centenum SW] gi|209960307|gb|ACJ00944.1| cytidine and deoxycytidylate deaminase, putative [Rhodospirillum centenum SW] Length = 158 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 73/134 (54%), Positives = 93/134 (69%), Gaps = 2/134 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAG--NRNRELKDVTAHAEILAIRMGCRI 65 M AL EA+ A R E+PVGAV V A NR EL D TAHAE+LAIR C + Sbjct: 15 MRQALAEAEAAGQRGEVPVGAVIVDPATGAVVAAAGNRTEELADPTAHAEVLAIRAACAV 74 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L LP +DLYVTLEPC MCAAAIS AR+RR+Y+GA +PKGGG+++G +F+T TCHH+ Sbjct: 75 LGAPRLPGLDLYVTLEPCAMCAAAISFARLRRVYFGAYDPKGGGVDHGPRFFTRTTCHHA 134 Query: 126 PEIYPGISEQRSRQ 139 P++Y GI+E+ + Sbjct: 135 PDVYGGIAEREAAD 148 >gi|149926554|ref|ZP_01914815.1| putative deaminase [Limnobacter sp. MED105] gi|149824917|gb|EDM84131.1| putative deaminase [Limnobacter sp. MED105] Length = 256 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 2/149 (1%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL++A+ AA E+P+GA V++ K ++ A N L D AHAE+ AIR Sbjct: 20 QDMPWMELALQQARLAAQAGEVPIGAAVVIDGKAVADAHNAPVLLNDACAHAEVQAIRQA 79 Query: 63 CRILSQEIL-PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-GGGIENGTQFYTLA 120 C+ + L + LYVTL+PC MC AI ARI R+ G + + G ++ + A Sbjct: 80 CQAIGNYRLGAQATLYVTLQPCLMCIGAILHARIGRVVVGCAQSRYNGDLKQSLSVFEQA 139 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H G Q S +++ FFK RR Sbjct: 140 QAWHPCAFETGCMAQESEELLGSFFKARR 168 >gi|50742655|ref|XP_419709.1| PREDICTED: similar to DEADC1 protein [Gallus gallus] Length = 172 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 8/155 (5%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ +M A AQ A E+PVG + V + I + N E K+ T HAE++AI Sbjct: 1 MEDEAAWMERAFSMAQEALEAGEVPVGCLLVYDGAAIGKGRNEVNETKNATRHAEMVAID 60 Query: 61 MGCRILSQ------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 Q E+ LYVT+EPC MCAAA+ L +I R+ YG N + GG + Sbjct: 61 QVLEWCQQHKKDHEEVFSHSVLYVTVEPCIMCAAALRLMKIPRVVYGCRNERFGGCGSVL 120 Query: 115 QFYTLATCH--HSPEIYPGISEQRSRQIIQDFFKE 147 + E G + + ++++ F+++ Sbjct: 121 SISSDDIVDTGEPFECIAGYRAKDAVEMLKAFYRQ 155 >gi|71003327|ref|XP_756344.1| hypothetical protein UM00197.1 [Ustilago maydis 521] gi|46096349|gb|EAK81582.1| hypothetical protein UM00197.1 [Ustilago maydis 521] Length = 1260 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 18/162 (11%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL AQ A NE+PVG V V ++I+R NR EL + T HAE+ AI Sbjct: 932 EEDIKWMREALVMAQEALDANEVPVGGVFVRKGEVIARGRNRTNELMNATRHAELEAIDH 991 Query: 62 GCRIL----------------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 ++ + LYVT+EPC MC AA+ I R+ +GA N Sbjct: 992 ILSVMPPSAPDFAVAPHSGPEGDNPFKDTTLYVTIEPCIMCGAALRQIGIGRVVFGAGNE 1051 Query: 106 KGGGIENGTQFYTLATCHHSP--EIYPGISEQRSRQIIQDFF 145 + GG + + SP E G + +++ F+ Sbjct: 1052 RFGGNGSVLGLHDDDAIVSSPGYESVGGYLRDEAIMMLRRFY 1093 >gi|226355797|ref|YP_002785537.1| tRNA(Ile)-lysidine synthetase [Deinococcus deserti VCD115] gi|259533711|sp|C1D1Q9|TILS_DEIDV RecName: Full=tRNA(Ile)-lysidine synthase; AltName: Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName: Full=tRNA(Ile)-lysidine synthetase gi|226317787|gb|ACO45783.1| putative tRNA(Ile)-lysidine synthetase [Deinococcus deserti VCD115] Length = 533 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 55/143 (38%), Positives = 77/143 (53%), Gaps = 2/143 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A+ AAL E+PVGAV + +II N +R D+T HAE+ A+R L Sbjct: 383 MGEALGLAREAALAQEVPVGAVVLGPGGRIIGSGRNTSRADSDMTRHAELAALRAATAEL 442 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPC MC A AR+ R+ YGASNPK G + + + + H P Sbjct: 443 GTAYLTGCTLVVTLEPCPMCLGAALEARVERIVYGASNPKAGALGGVSDLLS-SHWGHVP 501 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ Q + ++++D F+E R Sbjct: 502 AVTGGVRAQDAARVLRDSFQELR 524 >gi|87124293|ref|ZP_01080142.1| putative cytidine/deoxycytidylate deaminase [Synechococcus sp. RS9917] gi|86167865|gb|EAQ69123.1| putative cytidine/deoxycytidylate deaminase [Synechococcus sp. RS9917] Length = 147 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M L A E+PV AV + + I GNR +D HAE++A+ ++ Sbjct: 1 MGRLLRRADQLGREGEVPVCAVILDGLGRCIGYGGNRRERQRDPLGHAELVALGQASQLR 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L VTLEPC MCA A+ AR+ ++ + A + K G + + + HH Sbjct: 61 QDWRFNDCTLLVTLEPCPMCAGALVQARMGQVIFAAWDSKRGALGSTIDLSQHRSAHHHM 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 + G+ E +R ++ +F++RR Sbjct: 121 RVVGGVMEPEARTRLEAWFRQRR 143 >gi|305680082|ref|ZP_07402892.1| cytidine and deoxycytidylate deaminase zinc-binding region [Corynebacterium matruchotii ATCC 14266] gi|305660702|gb|EFM50199.1| cytidine and deoxycytidylate deaminase zinc-binding region [Corynebacterium matruchotii ATCC 14266] Length = 147 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 48/144 (33%), Positives = 65/144 (45%), Gaps = 5/144 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL ++PVGAV + +I R NR D TAHAEI+AIR R Sbjct: 7 MRHALAV---PTPLGDVPVGAVIFDPDGNVIGRGSNRREADGDPTAHAEIIAIREAVRNF 63 Query: 67 SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + + VTLEPC MCA A+ ARI + +GA PK G + + Sbjct: 64 HDGWRLTDCTIAVTLEPCCMCAGALVAARIGTIIFGAYEPKMGACGSVFDVVRDPQVLYQ 123 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P++ G+ + FF+E R Sbjct: 124 PQVIGGVLADECAAQLGVFFQECR 147 >gi|148546319|ref|YP_001266421.1| CMP/dCMP deaminase, zinc-binding [Pseudomonas putida F1] gi|148510377|gb|ABQ77237.1| tRNA-adenosine deaminase [Pseudomonas putida F1] gi|313497401|gb|ADR58767.1| CMP/dCMP deaminase zinc-binding protein [Pseudomonas putida BIRD-1] Length = 159 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL A A E+PVGAV V + ++I + NR D +AHAE++AIR Sbjct: 9 SRDQEFMRLALALAAEGAALGEVPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRA 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R S LP LYVTLEPC+MCA I +R+ R+ +GA PK G +++ QF+ Sbjct: 69 AARSASNYRLPGSTLYVTLEPCSMCAGLIVHSRVMRVVFGALEPKAGIVQSQGQFFGQGF 128 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ Q QI+ DFFK RR Sbjct: 129 LNHRVMVEGGVLAQECGQILSDFFKARR 156 >gi|289643685|ref|ZP_06475797.1| CMP/dCMP deaminase zinc-binding [Frankia symbiont of Datisca glomerata] gi|289506518|gb|EFD27505.1| CMP/dCMP deaminase zinc-binding [Frankia symbiont of Datisca glomerata] Length = 163 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 48/129 (37%), Positives = 67/129 (51%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PVGAV V + II R N +D TAHAE++A+R L L VTL Sbjct: 30 GDVPVGAVVVDADGTIIGRGRNAREAERDPTAHAEVVALRAAAARAGTWRLSGTTLVVTL 89 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A+ +AR+ RL YGA +P+ G + H E+ G+ E+ ++ Sbjct: 90 EPCAMCAGALIMARVDRLVYGAYDPRAGAAGSLWDTVRDPRLDHHTEVITGVREEECARL 149 Query: 141 IQDFFKERR 149 + DFF RR Sbjct: 150 LTDFFVARR 158 >gi|157413307|ref|YP_001484173.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9215] gi|157387882|gb|ABV50587.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9215] Length = 171 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 6/151 (3%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILA 58 K ++M+ L + + E+P+ ++ + + I R NR KD HAEI+A Sbjct: 21 SKYTLWMNSLL---RRSIEIGKVELPICSIILDERGRCIGRGVNRRNINKDPLGHAEIMA 77 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +R I + E + LEPCTMC++A+ AR+ ++ +GA + K GG+ Sbjct: 78 LRQASLIKNDWRFNECTIITNLEPCTMCSSALIQARMGKVIFGAYDKKRGGLGGSIDLSK 137 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + HH EI G+ E +I+Q +FK+ R Sbjct: 138 HESAHHKMEIIGGLLEDECSKILQIWFKKLR 168 >gi|225020161|ref|ZP_03709353.1| hypothetical protein CORMATOL_00161 [Corynebacterium matruchotii ATCC 33806] gi|224947126|gb|EEG28335.1| hypothetical protein CORMATOL_00161 [Corynebacterium matruchotii ATCC 33806] Length = 158 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 48/144 (33%), Positives = 65/144 (45%), Gaps = 5/144 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL ++PVGAV + +I R NR D TAHAEI+AIR R Sbjct: 18 MRHALAV---PTPLGDVPVGAVIFDPDGNVIGRGSNRREADGDPTAHAEIIAIREAVRNF 74 Query: 67 SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + + VTLEPC MCA A+ ARI + +GA PK G + + Sbjct: 75 HDGWRLTDCTIAVTLEPCCMCAGALVAARIGTIIFGAYEPKMGACGSVFDVVRDPQVLYQ 134 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 P++ G+ + FF+E R Sbjct: 135 PQVIGGVLADECAAQLGVFFQECR 158 >gi|296282925|ref|ZP_06860923.1| tRNA-adenosine deaminase [Citromicrobium bathyomarinum JL354] Length = 152 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 64/128 (50%), Positives = 90/128 (70%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV + + ++I++A N R L D TAHAE+LA+R + L QE L DL+VTLE Sbjct: 24 GEVPVGAVVMRHGEVIAQAHNAPRTLADPTAHAEVLALRAAAKALGQERLEGCDLWVTLE 83 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI+ ARI RLYYGA++PKGG + +G + + CHH PE+Y G+ E+ + +++ Sbjct: 84 PCAMCAGAIAHARIGRLYYGAADPKGGAVAHGARVFDHPQCHHRPEVYSGMGEEEAAKML 143 Query: 142 QDFFKERR 149 + FF ERR Sbjct: 144 RGFFNERR 151 >gi|120406536|ref|YP_956365.1| CMP/dCMP deaminase [Mycobacterium vanbaalenii PYR-1] gi|119959354|gb|ABM16359.1| tRNA-adenosine deaminase [Mycobacterium vanbaalenii PYR-1] Length = 166 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80 ++P+GAV + + ++RA N E D TAHAEILA+R R L L L VT+ Sbjct: 38 DVPIGAVVFAPDGRELARAANAREEFGDPTAHAEILALRAAARELGDGWRLEGATLAVTV 97 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ +AR+ R+ +GA PK G + + H P++ G+ E Sbjct: 98 EPCTMCAGALVMARVARVVFGAWEPKTGAVGSLWDVVRDRRLTHRPQVRGGVLEAECAAP 157 Query: 141 IQDFFKERR 149 +++FF +R Sbjct: 158 LEEFFAGQR 166 >gi|242041093|ref|XP_002467941.1| hypothetical protein SORBIDRAFT_01g036850 [Sorghum bicolor] gi|241921795|gb|EER94939.1| hypothetical protein SORBIDRAFT_01g036850 [Sorghum bicolor] Length = 183 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 21/163 (12%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALE+A+ A E+PVG V V + K+IS N+ ++ T HAE+ AI + R Sbjct: 4 AFMEQALEQAKFALDNLEVPVGCVIVEDGKVISSGSNKTNATRNATRHAEMEAIDVLLRE 63 Query: 66 LSQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 E DLYVT EPC MCA A+S+ IR +Y+G +N K GG + Sbjct: 64 WQSMGLDQTQVAEKFAGCDLYVTCEPCIMCATALSIIGIREVYFGCANDKFGGCGSIMSL 123 Query: 117 Y------------TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + + A+ + GI + + + + F+++ Sbjct: 124 HKGDTSSSDDLSGSQASKPKGFKCTGGIMAEEAVALFRCFYEQ 166 >gi|254466312|ref|ZP_05079723.1| cytosine deaminase [Rhodobacterales bacterium Y4I] gi|206687220|gb|EDZ47702.1| cytosine deaminase [Rhodobacterales bacterium Y4I] Length = 156 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 74/143 (51%), Positives = 98/143 (68%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE+A+ AA R E+PVGA + + ++ + AGNR REL D TAHAEIL IR C L Sbjct: 7 MDKALEQARAAAARGEVPVGAALIAPDGQVAALAGNRTRELNDPTAHAEILTIREACARL 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPC MCAAAI+ ARIRR+YYGA++PK GG+ +G ++ HH P Sbjct: 67 GSERLTGYDLYVTLEPCAMCAAAIAAARIRRVYYGAADPKSGGVAHGACVFSHPQAHHVP 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GI+E + ++++FF +R Sbjct: 127 EVYDGIAEGEASALLKEFFAGKR 149 >gi|114778043|ref|ZP_01452943.1| cytidine/deoxycytidylate deaminase family protein [Mariprofundus ferrooxydans PV-1] gi|114551649|gb|EAU54202.1| cytidine/deoxycytidylate deaminase family protein [Mariprofundus ferrooxydans PV-1] Length = 157 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 53/142 (37%), Positives = 73/142 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +M AL A+ AA E+PVGA+ VL + N L D +AHAE+ A+R Sbjct: 1 MMDDRHYMQKALLLAETAAANGEVPVGALVVLPDGREFAGHNAPITLHDPSAHAEMRAMR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C + L + LYVTLEPCTMCA AI ARI R+ YGA +PK G + + Q Sbjct: 61 AACAAVGNYRLNDATLYVTLEPCTMCAGAIVHARIGRVVYGADDPKTGAVTSLYQILADH 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQ 142 +H P + G+ +++ Sbjct: 121 RLNHQPTVTSGVMADECSALLK 142 >gi|242219384|ref|XP_002475472.1| predicted protein [Postia placenta Mad-698-R] gi|220725331|gb|EED79323.1| predicted protein [Postia placenta Mad-698-R] Length = 175 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 8/151 (5%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-- 60 + +M A++ A+ A E+PVG + V + ++I++A NR +L++ T HAE+ AI Sbjct: 6 EHVQWMRQAMQMAEIALAHGEVPVGCIFVRDGRVIAQARNRTNKLRNATRHAELEAIDEI 65 Query: 61 ----MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L+ L E LYVT+EPC MCA+A+ I+ ++YG N + GG + Sbjct: 66 LADKQWTPALTPYPLSETTLYVTVEPCIMCASALRQLGIKEVFYGCENDRFGGCGSVLGV 125 Query: 117 YTL--ATCHHSPEIYPGISEQRSRQIIQDFF 145 H + E G + + +++ F+ Sbjct: 126 NAEVPHPAHPAYEAKGGYLREEAIMVLRRFY 156 >gi|239907227|ref|YP_002953968.1| putative deaminase [Desulfovibrio magneticus RS-1] gi|239797093|dbj|BAH76082.1| putative deaminase [Desulfovibrio magneticus RS-1] Length = 162 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 46/129 (35%), Positives = 70/129 (54%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E PVGAV + ++++RAGN D TAHAE+ +R + LP L VTL Sbjct: 29 GETPVGAVLLSAAGELLARAGNAPITTNDPTAHAEMRVLRQAAAKVGNYRLPGTILAVTL 88 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MC A+ AR+ L YGA++P+ G +++ L +H + GI + I Sbjct: 89 EPCLMCLGAMIHARVGLLVYGATDPRCGVVDSRLPGPDLPFFNHRFNVVSGIRAEECGGI 148 Query: 141 IQDFFKERR 149 +++FF+E+R Sbjct: 149 LRNFFREKR 157 >gi|118404850|ref|NP_001072562.1| tRNA-specific adenosine deaminase 2 [Xenopus (Silurana) tropicalis] gi|123905851|sp|Q0P4H0|ADAT2_XENTR RecName: Full=tRNA-specific adenosine deaminase 2; AltName: Full=Deaminase domain-containing protein 1; AltName: Full=tRNA-specific adenosine-34 deaminase subunit ADAT2 gi|112419108|gb|AAI22085.1| deaminase domain containing 1 [Xenopus (Silurana) tropicalis] Length = 170 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 8/149 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A + AQ+A E+PVG + V +N+++ + N E K+ T HAE++AI Sbjct: 8 WMHKAFQMAQDALNNGEVPVGCLMVYDNQVVGKGRNEVNETKNATRHAEMVAIDQVLDWC 67 Query: 67 ------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 S+++ + LYVT+EPC MCA A+ L +I + YG N + GG + Sbjct: 68 EKNSKKSRDVFENIVLYVTVEPCIMCAGALRLLKIPLVVYGCRNERFGGCGSVLNVAGDN 127 Query: 121 TCHHSPEI--YPGISEQRSRQIIQDFFKE 147 E G +++ ++++ F+K+ Sbjct: 128 IPDTGTEFKYIGGYQAEKAVELLKTFYKQ 156 >gi|50954049|ref|YP_061337.1| cytosine/adenosine deaminase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950531|gb|AAT88232.1| cytosine/adenosine deaminase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 143 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 ++PV A+ V + +I N L+D TAHAE+LA+R + L L VTL Sbjct: 15 GDVPVAALVVDAGERVIGTGRNERELLRDPTAHAEVLALREAASSRADWNLEGCTLVVTL 74 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA AI AR+ + +GA + K G + E+Y G+ + R + Sbjct: 75 EPCAMCAGAILGARVTTVVFGAWDEKAGAAGSLYDILRDRRLPARSEVYAGVLAEECRAL 134 Query: 141 IQDFFKERR 149 + FF+ +R Sbjct: 135 LLAFFEAKR 143 >gi|219127140|ref|XP_002183799.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404522|gb|EEC44468.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 160 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 47/150 (31%), Positives = 79/150 (52%), Gaps = 4/150 (2%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVA--VLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM+ ALE++ A E+P+GA+ V +I+ + N+ + D +AHAE+LA+R Sbjct: 9 HEHFMTMALEQSIVAGKCGEVPIGALVPSVHRLQILGSSHNQVEQKYDASAHAELLAMRQ 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + L LY TLEPC +C A+ R+ R+ YGAS+ + G + + +A Sbjct: 69 AARRIRNWRLQSCTLYSTLEPCVVCLASCQAFRVSRVVYGASDFRLGAVHSHIALLDMAQ 128 Query: 122 --CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H+ + G+ S ++++ FF+ RR Sbjct: 129 HPFHNVTSVIGGVHNTTSAELLRSFFRSRR 158 >gi|115452727|ref|NP_001049964.1| Os03g0321900 [Oryza sativa Japonica Group] gi|108707878|gb|ABF95673.1| Cytidine and deoxycytidylate deaminase zinc-binding region family protein, expressed [Oryza sativa Japonica Group] gi|113548435|dbj|BAF11878.1| Os03g0321900 [Oryza sativa Japonica Group] gi|218192723|gb|EEC75150.1| hypothetical protein OsI_11352 [Oryza sativa Indica Group] Length = 183 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 18/159 (11%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+A+ A E+PVG V V + K+IS N+ ++ T HAE+ AI + R Sbjct: 8 FMELALEQAKFALDNLEVPVGCVIVEDGKVISSGSNKTNATRNATRHAEMEAIDILLREW 67 Query: 67 SQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 E DLYVT EPC MCA A+S+ IR +Y+G +N K GG + + Sbjct: 68 QGMGLDQPQVAEKFARCDLYVTCEPCIMCAMALSILGIREVYFGCANDKFGGCGSIMSLH 127 Query: 118 TLATC---------HHSPEIYPGISEQRSRQIIQDFFKE 147 ++ + GI + + + ++F+++ Sbjct: 128 QSSSAELSGEEIPGPKGYKCTGGIMAEEAVALFRNFYEQ 166 >gi|288919170|ref|ZP_06413508.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EUN1f] gi|288349417|gb|EFC83656.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EUN1f] Length = 156 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 44/115 (38%), Positives = 60/115 (52%) Query: 35 KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 +++ R N D TAHAE++A+R L L L VTLEPCTMCA A+ LAR Sbjct: 29 QVLGRGHNAREATGDPTAHAEVIALRHAAAELGAWRLGGTTLVVTLEPCTMCAGALVLAR 88 Query: 95 IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + R+ YGA +PK G + + +H PE+ G+ EQ + FF RR Sbjct: 89 VDRVVYGAVDPKAGAVGSLWDVVRDRRLNHRPEVISGVREQECSDQLAAFFDGRR 143 >gi|118464690|ref|YP_879612.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium avium 104] gi|254773334|ref|ZP_05214850.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118165977|gb|ABK66874.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium avium 104] Length = 152 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 3/151 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M + AL A A R ++P+GAV V + ++RA N L D TAHAEILA+ Sbjct: 1 MISDEDLIRSALAVAATAGPR-DVPIGAVVVGADGTELARAVNAREALGDPTAHAEILAL 59 Query: 60 RMGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 R L L L VT+EPCTMCA A+ LARI RL +GA PK G + + Sbjct: 60 RAAAAALGDGWRLEGATLAVTVEPCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVR 119 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ E+ +++ FF +R Sbjct: 120 DRRLNHRPEVRGGVLERECAALLEGFFARQR 150 >gi|317969787|ref|ZP_07971177.1| tRNA-specific adenosine deaminase [Synechococcus sp. CB0205] Length = 182 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 1/146 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 ++ ++M L A+ + EIPV AV + + + NR + + HAE++A+ Sbjct: 16 QRHELWMRRLLRRAEAVGEKGEIPVAAVLLDGHGRALGWGVNRRQREQRPLGHAELMALE 75 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R+ + L VTLEPC MCA A+ AR+ ++ +GA +PK G + T Sbjct: 76 QAARLRGDWRFNDCSLIVTLEPCPMCAGALVQARMGQVIFGAHDPKRGALGGCLNLATDP 135 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 + HH + G+ E + ++ +FK Sbjct: 136 SAHHHMTVMGGVLELECKSRLEAWFK 161 >gi|87302789|ref|ZP_01085600.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. WH 5701] gi|87282672|gb|EAQ74630.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. WH 5701] Length = 169 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 1/142 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M L AQ A EIPV A+ + + + NR + +D HAE++A+ Sbjct: 13 QFWMERLLRMAQRAGEAGEIPVAAIVLDGAGRALGWGTNRRQTHQDPLGHAELVALSQAA 72 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R++ L VTLEPC MCA A+ AR+ R+ + A + K G + + H Sbjct: 73 RLIHDWRFNACSLLVTLEPCPMCAGALIQARMGRVVFAAGDAKRGALGGCLNLAADPSSH 132 Query: 124 HSPEIYPGISEQRSRQIIQDFF 145 H E+ G+ E +R++++ +F Sbjct: 133 HHMEVMGGVRELEARELLESWF 154 >gi|224047988|ref|XP_002195924.1| PREDICTED: adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae) [Taeniopygia guttata] Length = 172 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 8/142 (5%) Query: 14 EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL------S 67 EA+ A + E+PVG + V N ++I R N E K+ T HAE++AI Sbjct: 14 EAKEALEKGEVPVGCLLVYNGEVIGRGRNEVNETKNATGHAEMVAIDQVLDWCKQHKRDY 73 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS-- 125 +E+ P++ LYVT+EPC MCAAA+ L +I R+ YG N + GG + + Sbjct: 74 REVFPQLVLYVTVEPCIMCAAAVRLMKIPRVVYGCRNERFGGCGSVLSISSDDMVDSGDP 133 Query: 126 PEIYPGISEQRSRQIIQDFFKE 147 E G + + ++++ F+++ Sbjct: 134 FECSSGYRAEEAVELLKAFYRQ 155 >gi|152964439|ref|YP_001360223.1| CMP/dCMP deaminase zinc-binding [Kineococcus radiotolerans SRS30216] gi|151358956|gb|ABS01959.1| CMP/dCMP deaminase zinc-binding [Kineococcus radiotolerans SRS30216] Length = 144 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 51/143 (35%), Positives = 69/143 (48%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA+ ++PVGAV V ++ N D TAHAE+LA+R R Sbjct: 1 MGLALDEARACLATGDVPVGAVVVDAAGTVLGAGRNEREAAGDPTAHAEVLALRAAARAR 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPC MCA A LAR+ RL GA +P+ G + A +H Sbjct: 61 GEWRLTGCTLVVTLEPCVMCAGATVLARVDRLVLGAWDPRFGAAGSLRDVVRDARLNHVV 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ + R ++ FF RR Sbjct: 121 EVAGDVRGAECRALLDGFFAARR 143 >gi|188994253|ref|YP_001928505.1| putative cytidine/deoxycytidylate deaminase [Porphyromonas gingivalis ATCC 33277] gi|188593933|dbj|BAG32908.1| putative cytidine/deoxycytidylate deaminase [Porphyromonas gingivalis ATCC 33277] Length = 159 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 44/140 (31%), Positives = 61/140 (43%), Gaps = 5/140 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ M A+ A + P GAV V + +II+ NR D TAHAE+ IRM Sbjct: 5 EQDKEMMREAIRLADESVANGGGPFGAVIVKDGEIIAATSNRVTLDNDPTAHAEVNCIRM 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF----Y 117 C+ L L +Y + EPC MC AI ARI R++YG + I F Sbjct: 65 ACKRLGTFDLSGCTIYTSCEPCPMCLGAIYWARIDRIFYGNNRQDAADIGFDDDFIYQEL 124 Query: 118 TLATCHHSPEIYPGISEQRS 137 + S I P I + + Sbjct: 125 ARPMDNRSTPIIP-ILQDEA 143 >gi|254525362|ref|ZP_05137414.1| cytosine/adenosine deaminase [Prochlorococcus marinus str. MIT 9202] gi|221536786|gb|EEE39239.1| cytosine/adenosine deaminase [Prochlorococcus marinus str. MIT 9202] Length = 171 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 6/151 (3%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILA 58 K ++M+ L + + E+P+ ++ + + I R NR KD HAEI+A Sbjct: 21 SKYTLWMNSIL---RRSKEIGKVELPICSIILDERGRCIGRGVNRRNINKDPLGHAEIMA 77 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +R I + E + LEPCTMC++A+ AR+ ++ +GA + K GG+ Sbjct: 78 LRQASLIKNDWRFNECTIITNLEPCTMCSSALIQARMGKVIFGAYDKKRGGLGGSIDLSK 137 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + HH EI G+ E +I+Q +FK+ R Sbjct: 138 HESAHHKMEIIGGLLEDECSKILQIWFKKLR 168 >gi|325191112|emb|CCA25598.1| SUMO ligase putative [Albugo laibachii Nc14] Length = 196 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 3/149 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM ALEEA+ A +R E+PVG VAV N+IIS A NR EL + T HAE++AI Sbjct: 9 DKDVGFMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY 68 Query: 62 GCRILSQEI--LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + E YVT EPC MCAAA+ ++ R+ +G N + GG + + Sbjct: 69 IVSNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEP 128 Query: 120 -ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + +PGI + +++Q F+++ Sbjct: 129 TANIPRTFSCHPGILRIEAIELLQRFYEQ 157 >gi|26987771|ref|NP_743196.1| cumB protein [Pseudomonas putida KT2440] gi|24982465|gb|AAN66660.1|AE016294_2 cumB protein [Pseudomonas putida KT2440] Length = 145 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 53/126 (42%), Positives = 74/126 (58%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V + ++I + NR D +AHAE++AIR R S LP LYVTLEPC Sbjct: 17 VPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRAAARSASNYRLPGSTLYVTLEPC 76 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 +MCA I +R+ R+ +GA PK G +++ QF+ +H + G+ Q QI+ D Sbjct: 77 SMCAGLIVHSRVMRVVFGALEPKAGIVQSQGQFFGQGFLNHRVMVEGGVLAQECGQILSD 136 Query: 144 FFKERR 149 FFK RR Sbjct: 137 FFKARR 142 >gi|17541138|ref|NP_502546.1| hypothetical protein JC8.4 [Caenorhabditis elegans] gi|6425182|emb|CAB05231.1| C. elegans protein JC8.4, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 176 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 4/149 (2%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + F+ A E AQ A +E+PVG V V+N I R NR E D T HAE++A+ Sbjct: 9 EDTAFLEKAFELAQEALDEDEVPVGCVFVVNGTEIGRGRNRVNETGDPTRHAEMVAVTEM 68 Query: 63 CRILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + ++L + LYV+LEPC MC++A+ IR++ YGA NP+ GG+ + Sbjct: 69 WKEHGTGCEDLLKKSTLYVSLEPCIMCSSAMYQLGIRKMVYGAENPRFGGVRSVGS-AEK 127 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + +I GI +RS +++ F+++ Sbjct: 128 YRMEDNVQIVAGIWSERSVAMLKTFYEKL 156 >gi|297563744|ref|YP_003682718.1| CMP/dCMP deaminase zinc-binding protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848192|gb|ADH70212.1| CMP/dCMP deaminase zinc-binding protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 160 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 70/148 (47%), Gaps = 6/148 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A+ E + A ++PVGAV + + ++ N D TAHAE+LA+R R Sbjct: 11 LRAAIAEGEAALETGDVPVGAVVLDADGAVLGTGRNEREATGDPTAHAEVLALRAAARAR 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L L VTLEPCTMCA A L+R+ RL YGA + K G + +H P Sbjct: 71 GEWRLGGCTLVVTLEPCTMCAGATVLSRVDRLVYGARDAKAGAAGSVWDAVRDPRLNHRP 130 Query: 127 EIYPG-----ISEQRSRQIIQDFFKERR 149 E+ P R ++ FF RR Sbjct: 131 EVVPPDLVPRELSDRCSDLLSRFFARRR 158 >gi|226528904|ref|NP_001152082.1| tRNA-specific adenosine deaminase [Zea mays] gi|195624114|gb|ACG33887.1| tRNA-specific adenosine deaminase [Zea mays] gi|195652465|gb|ACG45700.1| tRNA-specific adenosine deaminase [Zea mays] Length = 183 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 21/162 (12%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+A+ A E+PVG V V + K+IS N+ ++ T HAE+ AI + R Sbjct: 5 FMELALEQAKFALDNLEVPVGCVIVEDGKVISSGSNKTNATRNATRHAEMEAIDVLLREW 64 Query: 67 SQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 E DLYVT EPC MCA A+S+ IR +Y+G +N K GG + + Sbjct: 65 QSMGLDQPQVAEKFAGCDLYVTCEPCIMCATALSIIGIREVYFGCANDKFGGCGSIMSLH 124 Query: 118 T------------LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A+ + GI + + + + F+++ Sbjct: 125 NGAASSSDDLSGSQASKPKGFKCTGGIMAEEAVALFRCFYEQ 166 >gi|170106123|ref|XP_001884273.1| predicted protein [Laccaria bicolor S238N-H82] gi|164640619|gb|EDR04883.1| predicted protein [Laccaria bicolor S238N-H82] Length = 183 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 51/150 (34%), Positives = 77/150 (51%), Gaps = 8/150 (5%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR--M 61 + +M AL A+ A +E+PVG V V + II++A NR EL + T HAE+ AI M Sbjct: 5 HDRWMREALTMAEEALAASEVPVGCVFVRDGIIIAKARNRTNELCNATRHAELEAIDSIM 64 Query: 62 GCRILSQEI----LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 R L+ EI L LYVT+EPC MCA+A+ I+ ++YG +N + GG + Sbjct: 65 ADRSLTPEISEYPLSNTTLYVTVEPCIMCASALRQMGIKEVFYGCANDRFGGCGSVLGVN 124 Query: 118 T--LATCHHSPEIYPGISEQRSRQIIQDFF 145 H S G + + +++ F+ Sbjct: 125 ERLPHPTHPSYSATGGYYREEAIMMLRRFY 154 >gi|66806365|ref|XP_636905.1| adenosine deaminase, tRNA-specific [Dictyostelium discoideum AX4] gi|60465302|gb|EAL63394.1| adenosine deaminase, tRNA-specific [Dictyostelium discoideum AX4] Length = 254 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 7/152 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM A+EE A E+PV V V +II+R N+ K+ T HAE+ A Sbjct: 44 LSNHKKFMEAAIEEGYKALKEGEVPVACVIVYKGEIIARGSNKTNIKKNGTRHAELEAFD 103 Query: 61 M------GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 +L E DLYVT+EPC MC+ A+ +I+R+++G N K GG + Sbjct: 104 QIFLNKELNDRFKDSLLEECDLYVTVEPCLMCSVALQFCKIKRVFFGCHNDKFGGNGSVY 163 Query: 115 QFYTLATCHHSP-EIYPGISEQRSRQIIQDFF 145 + + P G+ + ++ ++Q F+ Sbjct: 164 ELNFSPISNGRPYNCITGLLKNQAILLLQLFY 195 >gi|320334320|ref|YP_004171031.1| tRNA(Ile)-lysidine synthase [Deinococcus maricopensis DSM 21211] gi|319755609|gb|ADV67366.1| tRNA(Ile)-lysidine synthase [Deinococcus maricopensis DSM 21211] Length = 529 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 52/147 (35%), Positives = 75/147 (51%), Gaps = 2/147 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +V M AL A+ A E+PVGAV + ++++RA N R D+T HAE+ A+R Sbjct: 382 DHVAMGEALAAAREAFGNAEVPVGAVITGPDGQVVARAANTARAHGDMTRHAELDALRAA 441 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L L LYVTLEPC MC A AR+ R+ +GA NPK G + T A Sbjct: 442 AATLGTAYLTGCTLYVTLEPCPMCLGAALEARVSRIVFGARNPKLGALGGVTDVLAYAW- 500 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H P++ G+ + + ++ F+ R Sbjct: 501 GHRPDVQGGVRAREASALLTGAFRTYR 527 >gi|169642534|gb|AAI60619.1| Adat2 protein [Danio rerio] Length = 238 Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats. Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 8/151 (5%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM--- 61 +M+ A + A A E+PVG + V NN+II + N E K+ T HAE++A+ Sbjct: 22 QTWMAKAFDMAVEAFENGEVPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLD 81 Query: 62 GCR---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 CR +E+ + LYVT+EPC MCAAA+ L RI + YG N + GG + + Sbjct: 82 WCRLREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGGCGSVLDVSS 141 Query: 119 LATCH--HSPEIYPGISEQRSRQIIQDFFKE 147 H S + G + + ++++ F+K+ Sbjct: 142 DHLPHTGTSFKCIAGYRAEEAVEMLKTFYKQ 172 >gi|294786275|ref|ZP_06751529.1| cytidine and deoxycytidylate deaminase family protein [Parascardovia denticolens F0305] gi|315225809|ref|ZP_07867597.1| cytidine and deoxycytidylate deaminase [Parascardovia denticolens DSM 10105] gi|294485108|gb|EFG32742.1| cytidine and deoxycytidylate deaminase family protein [Parascardovia denticolens F0305] gi|315119941|gb|EFT83073.1| cytidine and deoxycytidylate deaminase [Parascardovia denticolens DSM 10105] Length = 158 Score = 166 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 1/128 (0%) Query: 23 EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 ++PVGAV V K+++++GN + K +HAEI ++ G L L VTLE Sbjct: 27 DVPVGAVLVDPQGKVLAQSGNGRQRGKGPLSHAEIEVMQAGAAAWGSWNLEGCTLVVTLE 86 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA A A + R+ +GA + K G + PE+ G+ E + ++ Sbjct: 87 PCPMCAGAAVSAHLGRIVFGAWDQKMGACGSVWDIPRDPHIGFQPEVVGGVGEAECQSLL 146 Query: 142 QDFFKERR 149 +FF+ RR Sbjct: 147 TNFFRARR 154 >gi|302697295|ref|XP_003038326.1| hypothetical protein SCHCODRAFT_63904 [Schizophyllum commune H4-8] gi|300112023|gb|EFJ03424.1| hypothetical protein SCHCODRAFT_63904 [Schizophyllum commune H4-8] Length = 194 Score = 166 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 52/154 (33%), Positives = 81/154 (52%), Gaps = 9/154 (5%) Query: 1 MKK-GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M++ +M+ A+ AQ A E+PVG + V +NKII+ A NR EL++ T HAE+ AI Sbjct: 1 MEEVHLKWMAEAMNMAQEALDAGEVPVGCIFVRDNKIIASARNRTNELRNATRHAELEAI 60 Query: 60 RM--GCRILSQEI----LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 + L+ EI L LYVT+EPC MCA+A+ I+ ++YG N + GG + Sbjct: 61 DRILADKTLTPEICEYPLDTTTLYVTVEPCIMCASALRQLGIKEVFYGCGNDRFGGCGSV 120 Query: 114 TQFYT--LATCHHSPEIYPGISEQRSRQIIQDFF 145 H + +PG + + I++ F+ Sbjct: 121 LGVNESVPHPKHPAYRAHPGYLREEAIMILRRFY 154 >gi|167032047|ref|YP_001667278.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida GB-1] gi|166858535|gb|ABY96942.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida GB-1] Length = 159 Score = 166 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 82/148 (55%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL A A E+PVGAV V + ++I + NR D +AHAE++AIR Sbjct: 9 SRDQEFMRLALALAAEGAALGEVPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRA 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + S LP LYVTLEPC+MCA I +R+ R+ +GA PK G +++ QF+ Sbjct: 69 AAKAASNYRLPGSTLYVTLEPCSMCAGLIVHSRVMRVVFGALEPKAGIVQSQGQFFGQGF 128 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H + G+ + QI+ DFFK RR Sbjct: 129 LNHRVIVEGGVLAEACGQILSDFFKARR 156 >gi|238014692|gb|ACR38381.1| unknown [Zea mays] Length = 183 Score = 166 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 21/163 (12%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALE+A+ A E+PVG V V + K+IS N+ ++ T HAE+ AI + R Sbjct: 4 AFMELALEQAKFALDNLEVPVGCVIVEDGKVISSGSNKTNATRNATRHAEMEAIDVLLRE 63 Query: 66 LSQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 E DLYVT EPC MCA A+S+ IR +Y+G +N K GG + Sbjct: 64 WQSMGLDQPQVAEKFAGCDLYVTCEPCIMCATALSIIGIREVYFGCANDKFGGCGSIMSL 123 Query: 117 YT------------LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + A+ + GI + + + + F+++ Sbjct: 124 HNGAASSSDELSGSQASTPKGFKCTGGIMAEEAVALFRCFYEQ 166 >gi|323499747|ref|ZP_08104710.1| tRNA-specific adenosine deaminase [Vibrio sinaloensis DSM 21326] gi|323315193|gb|EGA68241.1| tRNA-specific adenosine deaminase [Vibrio sinaloensis DSM 21326] Length = 129 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 46/105 (43%), Positives = 61/105 (58%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G Sbjct: 18 DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 +L L + LYVTLEPC MCA A+ +RI R+ +GA + K Sbjct: 78 GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDDKN 122 >gi|159903565|ref|YP_001550909.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9211] gi|159888741|gb|ABX08955.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9211] Length = 165 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 1/148 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 K +M L A +E+PV A+ + N I N +D HAE++A+R Sbjct: 13 KTREWMRRLLNRANELGKEDEVPVIAMILDNKGHCIGHGRNTRNTERDPLGHAELVALRQ 72 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + + VTLEPC MCA A+ AR+ ++ +GA + K GG+ + Sbjct: 73 AKWLKKDWRFNDCTIIVTLEPCQMCAGALIQARMGKVIFGAPDTKRGGLGGSIDLSIHKS 132 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 HH ++ G+ + ++++I+ +F +RR Sbjct: 133 AHHKMIVHGGVMKYEAQELIRKWFSQRR 160 >gi|163737476|ref|ZP_02144893.1| CMP/dCMP deaminase, zinc-binding protein [Phaeobacter gallaeciensis BS107] gi|161389002|gb|EDQ13354.1| CMP/dCMP deaminase, zinc-binding protein [Phaeobacter gallaeciensis BS107] Length = 147 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 77/143 (53%), Positives = 99/143 (69%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA+ AA R E+PVGAV + + +I +RAGNR REL D TAHAE+L IR C + Sbjct: 1 MDIALTEARAAAARGEVPVGAVLIAPDGQIAARAGNRTRELSDPTAHAEVLVIREACAVA 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPC MCAAAI+ ARIRR+YYGAS+PK GG+ +G ++ HH+P Sbjct: 61 GSERLNGHDLYVTLEPCAMCAAAIAAARIRRVYYGASDPKSGGVAHGACVFSHPQAHHAP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GIS + + +++ FF RR Sbjct: 121 EVYEGISAEPAETLLKAFFAARR 143 >gi|32490887|ref|NP_871141.1| hypothetical protein WGLp138 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166093|dbj|BAC24284.1| yfhC [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 151 Score = 165 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 49/142 (34%), Positives = 72/142 (50%), Gaps = 1/142 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL A A EIP+G+V +L + II N++ + D +AHAEILA+R + ++ Sbjct: 1 MYHALYLANKAKKFGEIPIGSVVILKDNIIGEGWNQSIKKNDPSAHAEILALRSAGKNIN 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L ++Y T+EPC MC AI AR+ RL +GA K +H Sbjct: 61 NYRLLNTEIYTTIEPCIMCIGAIINARVSRLIFGARKTKKINF-FTKDLLNNCNLNHKIS 119 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + GI E+ ++II FF + R Sbjct: 120 LTEGILEENCKKIINKFFSKIR 141 >gi|4580029|gb|AAD24212.1|AF086638_2 CumB [Pseudomonas putida GB-1] Length = 145 Score = 165 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 51/126 (40%), Positives = 74/126 (58%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V + ++I + NR D +AHAE++AIR + S LP LYVTLEPC Sbjct: 17 VPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRAAAKAASNYRLPGSTLYVTLEPC 76 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 +MCA I +R+ R+ +GA PK G +++ QF+ +H + G+ + QI+ D Sbjct: 77 SMCAGLIVHSRVMRVVFGALEPKAGIVQSQGQFFGQGFLNHRVIVEGGVLAEACGQILSD 136 Query: 144 FFKERR 149 FFK RR Sbjct: 137 FFKARR 142 >gi|327403312|ref|YP_004344150.1| CMP/dCMP deaminase zinc-binding protein [Fluviicola taffensis DSM 16823] gi|327318820|gb|AEA43312.1| CMP/dCMP deaminase zinc-binding protein [Fluviicola taffensis DSM 16823] Length = 148 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 80/147 (54%), Gaps = 5/147 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A EAQ A E+PVGAV V+NN+II+RA N L DVTAHAE+ AI Sbjct: 6 NDEYFMRQAYMEAQKAFELGEVPVGAVVVVNNQIIARAHNLTERLHDVTAHAEMQAITAA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L + L + LYVTLEPC MCA A+ +++ ++ + + + K G + Y Sbjct: 66 SEYLGAKYLKDCTLYVTLEPCVMCAGALYWSQLNKIIFASRDEKRGAGRFQNELY----- 120 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G EQ Q++ DFFKE+R Sbjct: 121 HPKTVVSKGPMEQECAQLMIDFFKEKR 147 >gi|255580984|ref|XP_002531310.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Ricinus communis] gi|223529101|gb|EEF31082.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Ricinus communis] Length = 223 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 18/160 (11%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M ALE+A++A E+PVG V V + K+I+ NR E ++ T HAE+ AI + Sbjct: 45 AYMELALEQARHALDSLEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAIDVLLEQ 104 Query: 66 LSQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + E + LYVT EPC MCAAA+S+ I +YYG +N K GG + Sbjct: 105 WQKGGLSVSEVAEKFSKCVLYVTCEPCIMCAAALSILGIEEVYYGCANDKFGGCGSILPL 164 Query: 117 YTLAT---------CHHSPEIYPGISEQRSRQIIQDFFKE 147 ++ +T + GI + +++ F+++ Sbjct: 165 HSSSTQSLTSGVVAQGKGFKCTGGIMASEAVSLLRCFYEQ 204 >gi|306821661|ref|ZP_07455259.1| tRNA-specific adenosine deaminase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550406|gb|EFM38399.1| tRNA-specific adenosine deaminase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 153 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 1/145 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL A A +++E+PVG V V +++I+ N + K HAEILAI R Sbjct: 4 EKFMKKALSNAIRAYIQDEVPVGCVIVKGDEVIASTYNTKKATKSAINHAEILAIDEASR 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + IL + D+YVTLEPC MC AI +RI+++Y GA++ G + + Sbjct: 64 KLGRFILDDCDMYVTLEPCLMCTGAILQSRIKKVYIGATDESMGAFVSKIALVKDEMIYP 123 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 +I + S I+ FF++ R Sbjct: 124 Q-KIDYAFKKTISGYILSRFFRKIR 147 >gi|221129263|ref|XP_002158148.1| PREDICTED: similar to tRNA-specific adenosine deaminase [Hydra magnipapillata] Length = 226 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 23/163 (14%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR--- 60 FM AL A+ A + E+PVG V + +N +I+ N K+ T HAEI+A+ Sbjct: 43 NEEFMKKALVMAKVALEKGEVPVGCVIIHDNIVIADGYNDVNRTKNATRHAEIIALEKAR 102 Query: 61 ----MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + L+ + E LYVT EPC MCAAA+ ++ +++++YG +N + GG + Sbjct: 103 FYFLQAGKNLNS--MSECVLYVTTEPCIMCAAALRISGLKKVFYGCTNQRFGGCGSRLDV 160 Query: 117 YTLAT--------------CHHSPEIYPGISEQRSRQIIQDFF 145 ++ T + E G Q S +++ F+ Sbjct: 161 SSIKTEAKSKSNLSQCELQMSSNLECISGCLSQESINLLKLFY 203 >gi|223997732|ref|XP_002288539.1| hypothetical protein THAPSDRAFT_268551 [Thalassiosira pseudonana CCMP1335] gi|220975647|gb|EED93975.1| hypothetical protein THAPSDRAFT_268551 [Thalassiosira pseudonana CCMP1335] Length = 180 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 53/162 (32%), Positives = 79/162 (48%), Gaps = 17/162 (10%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVA---VLNNKIISRAGNRNRELKDVTAHAEIL 57 M+K FM AL A+ A E+PVG + ++ I+S N+ +D T HAEI+ Sbjct: 1 MEK--YFMRQALCVARTALDIGEVPVGCIVPYMASHSVIVSHGANQVNATRDATRHAEIV 58 Query: 58 AIRMGCRI--------LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 AI L EI DLYVT EPC MCAAA+S+ I R+++G N + GG Sbjct: 59 AIDRMLTKGRSSDQLKLPPEIFANCDLYVTCEPCIMCAAALSVMGIGRVFFGCRNDRFGG 118 Query: 110 IENGTQFYTLATC----HHSPEIYPGISEQRSRQIIQDFFKE 147 + + T HH I+ G+ E+ + +++ F+ Sbjct: 119 CGSILHLHKEDTLQSSKHHGFTIHGGLLEEEAVALLRSFYDR 160 >gi|261749231|ref|YP_003256916.1| putative cytosine/adenosine deaminase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497323|gb|ACX83773.1| putative cytosine/adenosine deaminase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 141 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 8/144 (5%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA A ++E+P+GA N II+RA N L D+TAHAE+L I + L Sbjct: 1 MKIALEEALIAFHKDEVPIGAAITYENGIIARAHNLTETLSDITAHAEMLVINLASDYLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 ++ + E LYVT+EPC MCA A+ ++I R+ G N K G + G + H + Sbjct: 61 KKYIQECTLYVTMEPCIMCAGALFFSQIGRVVCGTLNYKRGFLYTGIKL------HPRTK 114 Query: 128 IYPGISEQRSRQIIQD--FFKERR 149 GI + + + ++Q+ FFK +R Sbjct: 115 FLSGIMKNQCKNLLQEFFFFKRKR 138 >gi|304319888|ref|YP_003853531.1| cytidine and deoxycytidylate deaminase family protein [Parvularcula bermudensis HTCC2503] gi|303298791|gb|ADM08390.1| cytidine and deoxycytidylate deaminase family protein [Parvularcula bermudensis HTCC2503] Length = 172 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 60/146 (41%), Positives = 76/146 (52%), Gaps = 1/146 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL A AA E+PVGAV + ++I+ A N D TAHAE+ +R G Sbjct: 14 ERWMDHALGLASMAARNGEVPVGAVLLSATGQLIAEAVNTPIAQCDPTAHAELAVLRKGA 73 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L L VTLEPC MCA AI ARI L YGA +PKGG + +G + T H Sbjct: 74 LATGNYRLTGTTLLVTLEPCAMCAGAICHARIGHLVYGADDPKGGAVRHGATLFDQVTTH 133 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H P + GI S +++ FF ERR Sbjct: 134 HRPRVTAGIRADESAALLRSFFAERR 159 >gi|83952775|ref|ZP_00961505.1| cytidine and deoxycytidylate deaminase family protein [Roseovarius nubinhibens ISM] gi|83835910|gb|EAP75209.1| cytidine and deoxycytidylate deaminase family protein [Roseovarius nubinhibens ISM] Length = 151 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 76/143 (53%), Positives = 95/143 (66%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA+ AA R E+PVGAV V + +I+ GNR R D TAHAE+L IR GC +L Sbjct: 1 MDRALDEARAAAARGEVPVGAVLVGPDGAVIAADGNRTRAGHDPTAHAEMLVIRAGCAVL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPC MCAAAIS AR+ R+YYGA +PK GG+ +G + ++ CHH P Sbjct: 61 GVERLTGCDLYVTLEPCAMCAAAISAARVARVYYGAGDPKSGGVAHGARVFSHPQCHHVP 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 EIY GI S +++ FF RR Sbjct: 121 EIYDGIGGAESEALLRAFFAARR 143 >gi|312877655|ref|ZP_07737611.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus 6A] gi|311795548|gb|EFR11921.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus 6A] Length = 175 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 51/142 (35%), Positives = 77/142 (54%), Gaps = 6/142 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M +E A + N+IPV A V + +IIS + + K HAEILAI LS Sbjct: 39 MKTLIEYASRS---NDIPVAAAVVKDGRIISI---KRNDSKKAIYHAEILAIIDATSKLS 92 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L +++VT EPC MC +AI L++++RLY+GA + K G E+ +H E Sbjct: 93 TKDLRSCEMFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQHPFLNHKVE 152 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + GI E R +++ FF+E+R Sbjct: 153 VIGGICEDECRLLLKRFFEEKR 174 >gi|226303819|ref|YP_002763777.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis PR4] gi|226182934|dbj|BAH31038.1| putative tRNA-specific adenosine deaminase [Rhodococcus erythropolis PR4] Length = 153 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 3/149 (2%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRM 61 + A+ A++A+ ++PVGAV + + ++RA N D TAHAEILA+R Sbjct: 5 DDQRMIRAAIVAARSASDA-DVPVGAVVFDADGVEVARAANAREAASDPTAHAEILALRA 63 Query: 62 GCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +I L L VTLEPCTMCA A+ LAR+ R+ +GA PK G + + Sbjct: 64 AAKIYGDGWRLEGATLAVTLEPCTMCAGALVLARVSRVVFGAWEPKTGAVGSLWDVVRDK 123 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + P++ G+ E +++DFF+E+R Sbjct: 124 RLTYRPQVRGGVLEDECAGLLEDFFREQR 152 >gi|308802662|ref|XP_003078644.1| putative deaminase (ISS) [Ostreococcus tauri] gi|116057097|emb|CAL51524.1| putative deaminase (ISS) [Ostreococcus tauri] Length = 247 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 17/159 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M ALE A+ R E+P+GAV V N ++++ N D TAHAE+ AIRMG Sbjct: 75 MRRALEIARFGGARGEVPIGAVIVENDTGRVVAACANACERDGDPTAHAELRAIRMGAET 134 Query: 66 LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY------- 117 L L + +YVTLEPC MCA I AR+ R+ YGA N G + Sbjct: 135 LGNWRHLRKTTMYVTLEPCAMCAGGILQARVGRVVYGAKNALLGADGSWVSVLRKSDAVD 194 Query: 118 -------TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + + ++++FF+ RR Sbjct: 195 ESAATTTRPHAFSPDLDVTGGVLAEETGALMKEFFRARR 233 >gi|262276493|ref|ZP_06054302.1| tRNA-specific adenosine-34 deaminase [Grimontia hollisae CIP 101886] gi|262220301|gb|EEY71617.1| tRNA-specific adenosine-34 deaminase [Grimontia hollisae CIP 101886] Length = 174 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 40/109 (36%), Positives = 60/109 (55%) Query: 41 GNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 NR D TAHAE++A+R + L L E LYVTLEPC MCA+A+ +RI ++ + Sbjct: 44 WNRLIGQHDATAHAEMMALRQAGKKLQNYRLLEAVLYVTLEPCPMCASAMVHSRIGKVVF 103 Query: 101 GASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 GA + K G + + +H + G+ E+ R+ +Q FF+ RR Sbjct: 104 GAPDYKTGAAGSVMNLLSYDGVNHHVQFQGGVLEEECREQLQAFFRRRR 152 >gi|312126379|ref|YP_003991253.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor hydrothermalis 108] gi|311776398|gb|ADQ05884.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor hydrothermalis 108] Length = 171 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 6/142 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M +E A + N+IPV A V N KIIS + + K HAEILAI LS Sbjct: 35 MKTLIEYASRS---NDIPVAAAVVKNGKIISI---KRNDSKKAIYHAEILAIIDATSKLS 88 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L +++VT EPC MC +AI L++++RLY+GA + K G E+ +H E Sbjct: 89 TKDLRSCEMFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQNPFLNHKVE 148 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + GI E R +++ FF+E+R Sbjct: 149 VIGGICEDECRLLLKRFFEEKR 170 >gi|111021134|ref|YP_704106.1| tRNA-specific adenosine deaminase [Rhodococcus jostii RHA1] gi|110820664|gb|ABG95948.1| probable tRNA-specific adenosine deaminase [Rhodococcus jostii RHA1] Length = 123 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 49/122 (40%), Positives = 66/122 (54%), Gaps = 1/122 (0%) Query: 29 VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTLEPCTMCA 87 V + +SRA N + D TAHAEI+A+R R+ L L VTLEPCTMCA Sbjct: 2 VFDADGVEVSRAVNSREAMSDPTAHAEIIALRAAARVYGDGWRLEGATLAVTLEPCTMCA 61 Query: 88 AAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A+ LARI R+ +GA PK G + + H P++ G+ E I++DFF+E Sbjct: 62 GALVLARISRVVFGAWEPKTGAVGSLWDVVRDRRLTHRPQVRGGVLEDECAGILEDFFRE 121 Query: 148 RR 149 RR Sbjct: 122 RR 123 >gi|149914091|ref|ZP_01902623.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter sp. AzwK-3b] gi|149812375|gb|EDM72206.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter sp. AzwK-3b] Length = 157 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 72/129 (55%), Positives = 90/129 (69%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV V +I++RAGNR REL D TAHAEIL IR C + E LP LYVTL Sbjct: 21 GEVPVGAVLVDPKGRIVARAGNRTRELSDPTAHAEILVIREACAAVGSERLPGYALYVTL 80 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA AIS ARI RLYYGAS+PK GG+ +G + ++ CHH PEIY GI+ + + Sbjct: 81 EPCAMCATAISAARIARLYYGASDPKSGGVAHGARVFSHPQCHHVPEIYDGIAAAEAEAL 140 Query: 141 IQDFFKERR 149 ++ FF++RR Sbjct: 141 LKAFFRDRR 149 >gi|323697968|ref|ZP_08109880.1| CMP/dCMP deaminase, zinc-binding [Desulfovibrio sp. ND132] gi|323457900|gb|EGB13765.1| CMP/dCMP deaminase, zinc-binding [Desulfovibrio desulfuricans ND132] Length = 144 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 49/143 (34%), Positives = 68/143 (47%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A EA AA E PVGA +++ A NR D T HAEIL +R R+L Sbjct: 1 MDVAFGEACKAAQAGEAPVGAALFTPTGTLLASAHNRPIAAHDPTGHAEILCLREAARVL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 LP+ L VTLEPC MC A+ AR+ + + A + + G + + Q L +H Sbjct: 61 RNYRLPDTILAVTLEPCLMCTGALIHARVAGVVFAARDERAGALVSNMQGCALPFTNHRL 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 G+ +++ FF ERR Sbjct: 121 WTVEGVMGNECSALLKRFFLERR 143 >gi|41406377|ref|NP_959213.1| hypothetical protein MAP0279 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394725|gb|AAS02596.1| hypothetical protein MAP_0279 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 152 Score = 164 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 57/151 (37%), Positives = 77/151 (50%), Gaps = 3/151 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M + AL A A R ++P+GAV V + ++RA N L D TAHAEILA+ Sbjct: 1 MISDEDLIRSALAVAATAGPR-DVPIGAVVVGADGTELARAVNAREALGDPTAHAEILAL 59 Query: 60 RMGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 R L L L VT+EPCTMCA A+ LARI RL +GA PK G + + Sbjct: 60 RAAAAALGDGWRLEGATLAVTVEPCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVR 119 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ E+ ++ FF +R Sbjct: 120 DRRLNHRPEVRGGVLERECAAPLEGFFARQR 150 >gi|79361008|ref|NP_564523.3| emb2191 (embryo defective 2191); catalytic/ hydrolase/ zinc ion binding [Arabidopsis thaliana] gi|48310033|gb|AAT41740.1| At1g48175 [Arabidopsis thaliana] gi|50198832|gb|AAT70448.1| At1g48175 [Arabidopsis thaliana] gi|332194138|gb|AEE32259.1| Cytidine/deoxycytidylate deaminase family protein [Arabidopsis thaliana] Length = 182 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 17/164 (10%) Query: 1 MKKGNV-----FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAE 55 M++ + +M AL +A+ A E+PVG V + + K+I+ NR E ++ T HAE Sbjct: 1 MEEDHCEDSHNYMGFALHQAKLALEALEVPVGCVFLEDGKVIASGRNRTNETRNATRHAE 60 Query: 56 ILAIRM-GCRILSQ--------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 + AI + E + LYVT EPC MCA+A+S I+ +YYG N K Sbjct: 61 MEAIDQLVGQWQKDGLSPSQVAEKFSKCVLYVTCEPCIMCASALSFLGIKEVYYGCPNDK 120 Query: 107 GGGIENGTQFY---TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 GG + + A + GI + + + + F+++ Sbjct: 121 FGGCGSILSLHLGSEEAQRGKGYKCRGGIMAEEAVSLFKCFYEQ 164 >gi|158522912|ref|YP_001530782.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3] gi|158511738|gb|ABW68705.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3] Length = 157 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 6/149 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M+ + FM A+E A+ + P GAV V + +I+ NR D TAH EI+AI Sbjct: 1 MEMHDAFMRRAIELARAGMKAGDGGPFGAVVVRDGQIVGEGANRVLAHNDPTAHGEIVAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG----TQ 115 R + L L LY T +PC MC AI A I+ +Y+G S G + Sbjct: 61 RDAAKRLGTYDLDGCVLYTTGQPCPMCLGAIYWAHIQTVYFGFSIVDAGTVGFNDAVIFN 120 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + L P + + ++++F Sbjct: 121 EFALPPEKRRVNCRP-LLTDEAMILLKEF 148 >gi|34541357|ref|NP_905836.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas gingivalis W83] gi|34397674|gb|AAQ66735.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas gingivalis W83] Length = 150 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 5/134 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ A + P GAV V + +II+ NR D TAHAE+ IRM C+ L Sbjct: 2 MREAIRLADESVANGGGPFGAVIVKDGEIIAATSNRVTLDNDPTAHAEVNCIRMACKRLG 61 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF----YTLATCH 123 L +Y + EPC MC AI ARI R++YG + I F + Sbjct: 62 TFDLSGCTIYTSCEPCPMCLGAIYWARIDRIFYGNNRQDAADIGFDDDFIYQELARPMDN 121 Query: 124 HSPEIYPGISEQRS 137 S I P I + + Sbjct: 122 RSTPIIP-ILQDEA 134 >gi|299115717|emb|CBN74282.1| tRNA specific adenosine deaminase [Ectocarpus siliculosus] Length = 186 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 5/151 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAI 59 ++ V+M AL+EA+ A + E+PVG V V +IIS N E + T HAE++AI Sbjct: 12 EQNAVYMRLALKEAEMALSKGEVPVGCVVVHKPTARIISCGHNETSEAFNATRHAELVAI 71 Query: 60 RMGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 R + +L E DL+VT EPC MCAAA+ +I+ + +G SN + GG + + Sbjct: 72 DGILRAQTDLSLLRECDLFVTCEPCIMCAAALRDVKIKTVVFGCSNDRFGGCGSVLSVHD 131 Query: 119 --LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L H+ + G+ + + + F+ Sbjct: 132 GSLPISGHTYPCHSGLLADEAIALFKQFYSR 162 >gi|78779266|ref|YP_397378.1| tRNA-adenosine deaminase [Prochlorococcus marinus str. MIT 9312] gi|78712765|gb|ABB49942.1| tRNA-adenosine deaminase [Prochlorococcus marinus str. MIT 9312] Length = 171 Score = 163 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 6/147 (4%) Query: 6 VFMSCALEEAQNAALRN--EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ L + + E+P+ ++ + + I R NR KD HAEI+A+R Sbjct: 25 KWMNSIL---RRSEEIGKVELPISSIILDERGRCIGRGVNRRSVNKDPLGHAEIMALRQA 81 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 I + E LEPCTMCA+A+ AR+ ++ +GA + K GG+ + Sbjct: 82 SLIKNDWRFNECITITNLEPCTMCASALIQARMGKVVFGAYDKKRGGLGGSIDLSKHKSS 141 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 HH EI GI E+ QI+Q +FK+ R Sbjct: 142 HHKMEIVGGILEEECSQILQLWFKKLR 168 >gi|47207020|emb|CAF91477.1| unnamed protein product [Tetraodon nigroviridis] Length = 161 Score = 163 bits (415), Expect = 6e-39, Method: Composition-based stats. Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 8/148 (5%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A + A++A E+PVG + V NN+++ R N E K+ T HAE++A+ Sbjct: 1 MDEAFDMAKDALQNGEVPVGCLMVYNNEVVGRGRNEVNETKNATRHAEMVALDELLNWCH 60 Query: 68 QEIL------PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTL 119 L + LYVT+EPC MCAAA+ L I + YG N + GG + L Sbjct: 61 HSNLDVSKVSRKTVLYVTVEPCVMCAAALRLLNIALVVYGCRNERFGGCGSVLDVSGADL 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + + G + ++++ F+K+ Sbjct: 121 AQTGSTFKCVSGHRADEAVEMLKTFYKQ 148 >gi|319955332|ref|YP_004166599.1| guanine deaminase [Cellulophaga algicola DSM 14237] gi|319423992|gb|ADV51101.1| Guanine deaminase [Cellulophaga algicola DSM 14237] Length = 158 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 1/120 (0%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ FM A+ A+ N P GAV V +++II+ NR D TAHAE++AIR Sbjct: 3 ERDEFFMKRAIALAEEGMNANAGGPFGAVVVKDDEIIAEGYNRVTSTNDPTAHAEVVAIR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L+ L + +Y + EPC MC AI R + +Y+G + I+ QF Sbjct: 63 EACKKLNNFELTDCTIYTSCEPCPMCLGAIYWTRPKMVYFGCNREDAAAIQFDDQFIYDE 122 >gi|78356822|ref|YP_388271.1| tRNA-adenosine deaminase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219227|gb|ABB38576.1| tRNA-adenosine deaminase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 172 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 70/161 (43%), Gaps = 23/161 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL------------NNKIISRAGNRNRELK 48 K M ALE+A A L + ++ NR Sbjct: 22 WKSWEALMELALEQAVLAQL-----------HGEVPVGAVVVAPDGAVLGSGRNRPIATC 70 Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 D TAHAEILAIR C L + L VTLEPC MC AI AR+ + YGAS+ + G Sbjct: 71 DPTAHAEILAIRQACIHTGNYRLDDAVLVVTLEPCHMCTGAIIHARLAGVVYGASDKRAG 130 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +++ L +H P G+ E +++ +FFKE+R Sbjct: 131 AVDSCLDGLELPFHNHRPWYMSGVCEAECSRLLAEFFKEKR 171 >gi|194246540|ref|YP_002004179.1| Cytosine/adenosine deaminase [Candidatus Phytoplasma mali] gi|193806897|emb|CAP18326.1| Cytosine/adenosine deaminase [Candidatus Phytoplasma mali] Length = 151 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 82/149 (55%), Gaps = 1/149 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + FM A +EA+ A +NE+PVGAVAVLNN+II+R N + + HAE L + Sbjct: 2 LNEDLFFMKEAFKEAKKAYYKNEVPVGAVAVLNNQIIARTHNNCEKKQIFFGHAEFLLMM 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L ++++YVTLEPC MCA A+ +I ++YY +N K G I++ Sbjct: 62 KLNKKFKNRRLNKINIYVTLEPCLMCAGALIQTQINKVYYSVNNYKSGSIDSVISLLKFK 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H G+ + ++ ++++FFK R Sbjct: 122 Y-PHKIITESGLLAKENKILLKNFFKNLR 149 >gi|88855909|ref|ZP_01130571.1| cytosine/adenosine deaminase [marine actinobacterium PHSC20C1] gi|88814776|gb|EAR24636.1| cytosine/adenosine deaminase [marine actinobacterium PHSC20C1] Length = 155 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 1/149 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 K + +M+ A+ EA+ A ++PV A+ N+ ++S N D TAHAE++AIR Sbjct: 7 TKFDQWMTRAVAEAKLTADSADVPVAALVFDENDNLVSIGRNERELTGDPTAHAEVVAIR 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L VTLEPCTMCA AI ARI R+ +GA + K G + Sbjct: 67 AAAAATGSWRLDTMTLVVTLEPCTMCAGAILQARIPRVVFGAWDEKAGAAGSVNDLLRDR 126 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ GI E ++ +FF+ RR Sbjct: 127 RLPHKVEVVAGIQEAECAALLTEFFEARR 155 >gi|33519984|ref|NP_878816.1| putative cytosine/adenosine deaminase [Candidatus Blochmannia floridanus] gi|33504330|emb|CAD83223.1| cytosine/adenosine deaminase zinc-binding region; hydrolase activity [Candidatus Blochmannia floridanus] Length = 159 Score = 163 bits (414), Expect = 8e-39, Method: Composition-based stats. Identities = 55/144 (38%), Positives = 76/144 (52%), Gaps = 1/144 (0%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++M A+ A A L ++ VGAV V N ++I N + + D +AHAEI+A+R+G + Sbjct: 9 IWMCYAVMLANIADLNGDVSVGAVLVYNERLIGCGYNASIKNNDPSAHAEIVALRIGAEV 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LYVTLEPC MC A+ AR+ +L YGA N K + Y C+H Sbjct: 69 LGNYRLLNTTLYVTLEPCMMCIGAMIHARVYKLVYGAHNKKTEYF-SIWNKYIRNDCNHR 127 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 I G+ E+ I FFK RR Sbjct: 128 FVIKSGVLEKICSDQISSFFKIRR 151 >gi|332969045|gb|EGK08085.1| tRNA-specific adenosine deaminase [Kingella kingae ATCC 23330] Length = 246 Score = 163 bits (414), Expect = 8e-39, Method: Composition-based stats. Identities = 45/117 (38%), Positives = 65/117 (55%) Query: 20 LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 E+PVGAV V +II++A NR D+ HAE+ A+ + + L L + DLYV+ Sbjct: 113 ECGEVPVGAVVVHRGEIIAQAHNRCIADCDIGRHAEMNALALAGKTLGNYRLADCDLYVS 172 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136 LEPCTMCA+A+ ARIRR+ + AS PK G + +T + + + GI Sbjct: 173 LEPCTMCASAMIQARIRRVIFAASEPKTGAAGSVINLFTNSQLNQHTAVLGGIMATE 229 >gi|88608086|ref|YP_505986.1| cytidine/deoxycytidylate deaminase family protein [Neorickettsia sennetsu str. Miyayama] gi|88600255|gb|ABD45723.1| cytidine/deoxycytidylate deaminase family protein [Neorickettsia sennetsu str. Miyayama] Length = 144 Score = 163 bits (414), Expect = 8e-39, Method: Composition-based stats. Identities = 56/146 (38%), Positives = 80/146 (54%), Gaps = 4/146 (2%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM A+ A+ + E+PVGAV V +I+ +GNR D TAHAE+ IR Sbjct: 2 DKKFMELAMSVARQSDC--EVPVGAVLVRQGAVIASSGNRVFRDSDPTAHAEMFVIREAI 59 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L + L + +LYVTLEPC MC A+SL+R+ L + A + K G I NG T Sbjct: 60 QRLGVKFLVDFELYVTLEPCPMCMYAMSLSRVGTLCFAAYDEKRGAISNGC--LGTGTYF 117 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H P IY G+ E +++++ FF+ R Sbjct: 118 HVPIIYEGLMEDEAKELLSSFFRILR 143 >gi|299747155|ref|XP_002911134.1| tRNA specific adenosine deaminase [Coprinopsis cinerea okayama7#130] gi|298407392|gb|EFI27640.1| tRNA specific adenosine deaminase [Coprinopsis cinerea okayama7#130] Length = 188 Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats. Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 9/153 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M A+ A+ A E+PVG V V + KII++A NR EL++ T HAE+ AI Sbjct: 9 DRHLKWMKEAMNMAEEALAAGEVPVGCVFVRDEKIIAKARNRTNELRNATRHAELEAIDC 68 Query: 62 GC-------RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + L LYVT+EPC MCA+A+ I+ ++YG N + GG + Sbjct: 69 ILSDNELTPQKGEPYPLSTTTLYVTVEPCIMCASALRQLGIKEVFYGCGNERFGGCGSVL 128 Query: 115 QFY-TLATCHHSP-EIYPGISEQRSRQIIQDFF 145 L H P + G + + I++ F+ Sbjct: 129 GVNQELPHPQHPPYKATAGYCREEAIMILRRFY 161 >gi|283851075|ref|ZP_06368359.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio sp. FW1012B] gi|283573471|gb|EFC21447.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio sp. FW1012B] Length = 181 Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats. Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 1/127 (0%) Query: 24 IPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 PVGAV + +++++ GN D TAHAEILA+R + LP L VTLEP Sbjct: 46 TPVGAVLLSGAGEVLAQTGNGPISRADPTAHAEILALRQAAARVGNYRLPGSILVVTLEP 105 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MC A+ AR+ L YGA +P+ G +++ L +H ++ G+ S +++ Sbjct: 106 CLMCLGAMIHARVGLLVYGAPDPRTGAVDSRLPGPDLPFFNHRFDVLSGVCADASAALLR 165 Query: 143 DFFKERR 149 FF+ RR Sbjct: 166 QFFRNRR 172 >gi|254568360|ref|XP_002491290.1| Subunit of tRNA-specific adenosine-34 deaminase [Pichia pastoris GS115] gi|238031087|emb|CAY69010.1| Subunit of tRNA-specific adenosine-34 deaminase [Pichia pastoris GS115] gi|328352193|emb|CCA38592.1| hypothetical protein PP7435_Chr2-0910 [Pichia pastoris CBS 7435] Length = 220 Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats. Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 8/152 (5%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ FM AL+ AQ A E+P+G + V NKII++ N+ HAE+ AI Sbjct: 3 LETHFNFMKKALDAAQIALDELEVPIGCIFVYKNKIIAQGSNKTNATSCGINHAEMEAID 62 Query: 61 MGCRILSQE--ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 ILP DLYVT+EPC MCA+A+ IRR+++G +N + GG + ++ Sbjct: 63 EIIAKYPNYKEILPFADLYVTVEPCIMCASALRQLGIRRVFFGCANDRFGGNGSVLTIHS 122 Query: 119 LATCHHSPE-----IYPGISEQRSRQIIQDFF 145 ++ + +YPGI + + +++ F+ Sbjct: 123 DK-LNNKLDSSIYPVYPGIYAKEAVTLLRKFY 153 >gi|325191113|emb|CCA25599.1| SUMO ligase putative [Albugo laibachii Nc14] Length = 182 Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 78/143 (54%), Gaps = 3/143 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA+ A +R E+PVG VAV N+IIS A NR EL + T HAE++AI + Sbjct: 1 MREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDYIVSNYN 60 Query: 68 QEI--LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-ATCHH 124 E YVT EPC MCAAA+ ++ R+ +G N + GG + + A Sbjct: 61 NTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEPTANIPR 120 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 + +PGI + +++Q F+++ Sbjct: 121 TFSCHPGILRIEAIELLQRFYEQ 143 >gi|297847068|ref|XP_002891415.1| EMB2191 [Arabidopsis lyrata subsp. lyrata] gi|297337257|gb|EFH67674.1| EMB2191 [Arabidopsis lyrata subsp. lyrata] Length = 192 Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats. Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 19/165 (11%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + +M AL +A+ A E+PVG V + + K+I+ NR E ++ T HAE+ AI Sbjct: 10 EDSHNYMGFALHQAKLALEALEVPVGCVLLEDGKVIASGRNRTNETRNATRHAEMEAIDQ 69 Query: 62 -GCRILSQ--------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 + E + LYVT EPC MCA+A+S I+ +YYG N K GG + Sbjct: 70 LVGQWQEDGLSPSQVAEKFSKCILYVTCEPCIMCASALSFLGIKEVYYGCPNDKFGGCGS 129 Query: 113 GTQFY----------TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + + + GI + + + + F+++ Sbjct: 130 ILSLHLGSSQSSDIIEESQRGKGYKCRGGIMAEEAVSLFKCFYEQ 174 >gi|319441800|ref|ZP_07990956.1| putative cytosine/adenosine deaminase [Corynebacterium variabile DSM 44702] Length = 167 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 4/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ ALE A + ++PVGAV + ++ A NR D TAHAE+LA+R Sbjct: 26 MARALEVA-ASTPDGDVPVGAVVYAPDGTELAAATNRREADADPTAHAEVLALRAATAAH 84 Query: 67 SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L VTLEPC MCA A+ AR+R + +GA P+ G + + H+ Sbjct: 85 GDAWRLTDCTLVVTLEPCAMCAGAMVGARVRTVVFGAWEPRTGACGSVFDVARESPL-HA 143 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ ++++FF RR Sbjct: 144 VEVRGGVLLDECEDLVREFFSSRR 167 >gi|326772679|ref|ZP_08231963.1| cytidine and deoxycytidylate deaminase family protein [Actinomyces viscosus C505] gi|326637311|gb|EGE38213.1| cytidine and deoxycytidylate deaminase family protein [Actinomyces viscosus C505] Length = 196 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 56/143 (39%), Positives = 74/143 (51%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A+ A E+PVGAV + +++ A N D TAHAEI A+R L Sbjct: 54 MLRALELARAAGEAGEVPVGAVVLSPEGVVLAEAANAREAEHDPTAHAEIRALRAAGAAL 113 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPCTMCA AI LAR+ RL GA P+ G + +H Sbjct: 114 GDSHLDGCTLVVTLEPCTMCAGAIVLARVARLVLGAWEPRTGACGSVRDVVRDTRANHQV 173 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+ G+ Q S++++ FF +RR Sbjct: 174 EVRAGLRAQESQELLTAFFADRR 196 >gi|323135792|ref|ZP_08070875.1| CMP/dCMP deaminase, zinc-binding [Methylocystis sp. ATCC 49242] gi|322398883|gb|EFY01402.1| CMP/dCMP deaminase, zinc-binding [Methylocystis sp. ATCC 49242] Length = 148 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 57/108 (52%), Positives = 77/108 (71%) Query: 42 NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 NR +D TAHAE+L IR + E L + DLYVTLEPC MCA AIS ARIRRLY+ Sbjct: 41 NRTLRDRDPTAHAEMLVIRQAAAAIGSERLVDCDLYVTLEPCAMCAGAISFARIRRLYFA 100 Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A +PKGG +++G +F++ TCHH+P++Y GI E + Q+++DFF+ RR Sbjct: 101 AEDPKGGAVDHGPRFFSQPTCHHAPDVYGGIRESEAAQLLRDFFRARR 148 >gi|16124486|ref|NP_419050.1| cytidine and deoxycytidylate deaminase family protein [Caulobacter crescentus CB15] gi|13421360|gb|AAK22218.1| cytidine and deoxycytidylate deaminase family protein [Caulobacter crescentus CB15] Length = 161 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 57/130 (43%), Positives = 77/130 (59%), Gaps = 2/130 (1%) Query: 22 NEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 E PVGAV + ++I+ AGN D TAHAEI A+R L L ++ L VT Sbjct: 28 GETPVGAVILDPSTGEVIATAGNGPIAAHDPTAHAEIAAMRAAAAKLGNYRLTDLTLVVT 87 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA AIS ARI R+ +GA +PKGG + +G +F+ TCH PE+ G+ S Sbjct: 88 LEPCAMCAGAISHARIGRVVFGADDPKGGAVVHGPKFFAQPTCHWRPEVTGGVLADESAD 147 Query: 140 IIQDFFKERR 149 +++ FF+ RR Sbjct: 148 LLRGFFRARR 157 >gi|326915810|ref|XP_003204205.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Meleagris gallopavo] Length = 165 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 8/148 (5%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M L EAQ A E+PVG + V + + I + N E K+ T HAE++AI Sbjct: 1 MHTKLAEAQEALEAGEVPVGCLLVYDGEAIGKGRNEVNETKNATRHAEMVAIDQVLEWCQ 60 Query: 68 Q------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-- 119 Q E+ LYVT+EPC MCAAA+ L +I R+ YG N + GG + + Sbjct: 61 QHKKAHEEVFSHSVLYVTVEPCIMCAAALRLMKIPRVVYGCRNERFGGCGSVLSISSDDI 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E G + + ++++ F+++ Sbjct: 121 ADTGEPFECIGGYRAKDAVEMLKAFYRQ 148 >gi|319948568|ref|ZP_08022697.1| cytidine and deoxycytidylate deaminase family protein [Dietzia cinnamea P4] gi|319437767|gb|EFV92758.1| cytidine and deoxycytidylate deaminase family protein [Dietzia cinnamea P4] Length = 143 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 52/144 (36%), Positives = 74/144 (51%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL A ++PVGAV + + ++ A NR D AHAE+LA+R R+L Sbjct: 1 MRRALAVA-AGTPPEDVPVGAVVIGPDGTELAAATNRRETDGDPFAHAEVLALREAARVL 59 Query: 67 SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + L VTLEPCTMCA A AR+ R+ +GA P+ G + H Sbjct: 60 GDGWRLEDCTLVVTLEPCTMCAGAAVAARVGRIVFGAWEPRTGACGSLWDVVRDRRLVHR 119 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE++ G+ E +++DFF+ RR Sbjct: 120 PEVHGGVLEDECAAVLEDFFRARR 143 >gi|221233170|ref|YP_002515606.1| tRNA-specific adenosine deaminase [Caulobacter crescentus NA1000] gi|220962342|gb|ACL93698.1| tRNA-specific adenosine deaminase [Caulobacter crescentus NA1000] Length = 148 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 57/130 (43%), Positives = 77/130 (59%), Gaps = 2/130 (1%) Query: 22 NEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 E PVGAV + ++I+ AGN D TAHAEI A+R L L ++ L VT Sbjct: 15 GETPVGAVILDPSTGEVIATAGNGPIAAHDPTAHAEIAAMRAAAAKLGNYRLTDLTLVVT 74 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA AIS ARI R+ +GA +PKGG + +G +F+ TCH PE+ G+ S Sbjct: 75 LEPCAMCAGAISHARIGRVVFGADDPKGGAVVHGPKFFAQPTCHWRPEVTGGVLADESAD 134 Query: 140 IIQDFFKERR 149 +++ FF+ RR Sbjct: 135 LLRGFFRARR 144 >gi|23097839|ref|NP_691305.1| hypothetical protein OB0384 [Oceanobacillus iheyensis HTE831] gi|22776063|dbj|BAC12340.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 159 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 45/122 (36%), Positives = 58/122 (47%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +FMS A+E A + + P GAV + +NKII+ N+ D TAHAE+ AIR Sbjct: 6 NHQLFMSKAIELAVSNISQGGGPFGAVIIKDNKIIAEGTNQVTNYNDPTAHAEVQAIRQA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C LS L LY + EPC MC AI AR+ +YYGA+ I Sbjct: 66 CEKLSTFELKGCTLYTSCEPCPMCLGAIYWARVDAVYYGANRKDAAKINFDDDLIYQEID 125 Query: 123 HH 124 H Sbjct: 126 LH 127 >gi|302794668|ref|XP_002979098.1| hypothetical protein SELMODRAFT_109716 [Selaginella moellendorffii] gi|300153416|gb|EFJ20055.1| hypothetical protein SELMODRAFT_109716 [Selaginella moellendorffii] Length = 162 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 16/149 (10%) Query: 14 EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-------GCRIL 66 +A+ A R E+PVG V V N ++I+ NR E ++ T HAE+ AI M Sbjct: 1 QARQALNRLEVPVGCVIVENGRVIASGSNRTNETRNATRHAEMEAIDMLLPRWECSSHED 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + +LYVT EPC MCAAA+SL I +++YG N + GG + ++ HSP Sbjct: 61 FSKRFAGCELYVTCEPCIMCAAALSLLGIGKVFYGCKNDRFGGCGSILSLHSN-GVGHSP 119 Query: 127 E--------IYPGISEQRSRQIIQDFFKE 147 E GI + + + ++F+++ Sbjct: 120 ESAGGMTYPCVGGIMAEEAIGLFREFYEQ 148 >gi|99081767|ref|YP_613921.1| CMP/dCMP deaminase, zinc-binding [Ruegeria sp. TM1040] gi|99038047|gb|ABF64659.1| CMP/dCMP deaminase zinc-binding [Ruegeria sp. TM1040] Length = 144 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 71/129 (55%), Positives = 88/129 (68%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV V K+++RAGNR REL D TAHAE+LAIR C L E L DLYVTL Sbjct: 15 GEVPVGAVLVSPEGKVVARAGNRTRELNDPTAHAEVLAIRAACAALGSERLLGHDLYVTL 74 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCAAAI+ ARI R+YYGAS+PK GG+ +G + HH+PE+Y G S +S + Sbjct: 75 EPCAMCAAAIAAARIARVYYGASDPKSGGVAHGACVFDHPQSHHAPEVYEGFSAAQSEAL 134 Query: 141 IQDFFKERR 149 ++ FF RR Sbjct: 135 LRAFFALRR 143 >gi|123968475|ref|YP_001009333.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. AS9601] gi|123198585|gb|ABM70226.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. AS9601] Length = 145 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 3/137 (2%) Query: 16 QNAALRN--EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72 + + E+P+ ++ + + I R N KD HAEI+A+R I + Sbjct: 6 RRSKEIGKVELPICSIILDERGRCIGRGVNSRNINKDPLGHAEIMALRQASLIKNDWRFN 65 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132 E + LEPCTMC++A+ AR+ ++ +GA + K GG+ + HH EI GI Sbjct: 66 ECTIITNLEPCTMCSSALIQARMGKVIFGAYDKKRGGLGGSIDLSKHESAHHKMEIIGGI 125 Query: 133 SEQRSRQIIQDFFKERR 149 E QI+Q +FK+ R Sbjct: 126 LEDECSQILQIWFKKLR 142 >gi|163797849|ref|ZP_02191794.1| Cytosine/adenosine deaminase [alpha proteobacterium BAL199] gi|159176893|gb|EDP61460.1| Cytosine/adenosine deaminase [alpha proteobacterium BAL199] Length = 150 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 68/134 (50%), Positives = 90/134 (67%), Gaps = 2/134 (1%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIR 60 G+ +M+ AL +A++AA E+PVGAV V + ++++ AGNR D TAHAE+LAIR Sbjct: 2 TGDGYMARALAQAESAASAGEVPVGAVVVHAPSGRVLAEAGNRVETDCDPTAHAEVLAIR 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R L L + DLYVTLEPC MCA AI+ AR+RRL +GA +PKGGG+E+G + Sbjct: 62 AAARALGAPRLVDCDLYVTLEPCAMCAQAIAHARLRRLVFGAYDPKGGGVEHGARVLEQP 121 Query: 121 TCHHSPEIYPGISE 134 TCHH PEI G+ E Sbjct: 122 TCHHRPEIVGGVEE 135 >gi|312621259|ref|YP_004022872.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor kronotskyensis 2002] gi|312201726|gb|ADQ45053.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor kronotskyensis 2002] Length = 143 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 6/142 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M +E A + N+IPV A V N KIIS + + K HAEILAI LS Sbjct: 7 MKTLIEYASRS---NDIPVAAAIVKNGKIISI---KRNDSKKAIYHAEILAIIDATSKLS 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L +++VT EPC MC +AI L++++RLY+GA + K G E+ +H E Sbjct: 61 TKDLRNCEMFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQNPFLNHKVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + GI E R +++ FF+E+R Sbjct: 121 VIGGICEDECRLLLKRFFEEKR 142 >gi|126311160|ref|XP_001380965.1| PREDICTED: similar to DEADC1 protein [Monodelphis domestica] Length = 182 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 8/143 (5%) Query: 13 EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS----- 67 +A+ A E+PVG + V NNK++++ N + K+ T HAE++AI Sbjct: 22 AQAKEALENGEVPVGCLMVYNNKVLAKGRNEVNQTKNATRHAEMVAIDQVLEWCHRYGKS 81 Query: 68 -QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHH 124 E+ LYVT+EPC MCAAA+ L +I + YG N + GG + L Sbjct: 82 PTEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLDIASADLPNTGT 141 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 + PG + + ++++ F+K+ Sbjct: 142 PFQCIPGYQAEEAVEMLKTFYKQ 164 >gi|206895932|ref|YP_002246819.1| tRNA-specific adenosine deaminase [Coprothermobacter proteolyticus DSM 5265] gi|206738549|gb|ACI17627.1| tRNA-specific adenosine deaminase [Coprothermobacter proteolyticus DSM 5265] Length = 154 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 28/161 (17%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRA--------------GNRNRELK 48 +M AL+EA A N+ N + Sbjct: 6 DDEKYMVEALKEAVKAY--------------NEGEVPVGVVVVFNGVVVGRGYNLREQSH 51 Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 D TAHAE++A+R + + L +YVTLEPC MC A+ LAR+ R+ +GA++ K G Sbjct: 52 DPTAHAEVVALRDAAAHMGRWNLSGATVYVTLEPCLMCCYALVLARVDRVVFGATDQKAG 111 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + F +L +H E+ G+ E+ +++ FF++ R Sbjct: 112 ALVTHMDFLSLPFLNHRFEVRGGVLEKSCSKLLSSFFRKLR 152 >gi|146295406|ref|YP_001179177.1| CMP/dCMP deaminase, zinc-binding [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145408982|gb|ABP65986.1| tRNA-adenosine deaminase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 143 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 45/127 (35%), Positives = 72/127 (56%), Gaps = 3/127 (2%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 +IP+ A + + +IIS + + K+ HAEILAI LS + L ++ VT EP Sbjct: 19 DIPIAAAVLRDGEIISI---QKNDSKNAIFHAEILAILDAASKLSTKDLRGCEMVVTKEP 75 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MC +AI L++I RLY+GA + K G E+ + +H E+ GI E+ + +++ Sbjct: 76 CPMCMSAIVLSKIDRLYFGARDFKMGAAESCFKLSQDPNLNHKVEVIGGICEEECKALLK 135 Query: 143 DFFKERR 149 FF++RR Sbjct: 136 SFFEKRR 142 >gi|321465150|gb|EFX76153.1| hypothetical protein DAPPUDRAFT_306296 [Daphnia pulex] Length = 171 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 8/148 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A E A+ A E+PVG V L II NR E K+ T HAE+ AI Sbjct: 8 YMDRAFELAREALSVGEVPVGCVLHLEGYGIIGEGRNRVNETKNATRHAELEAIDSALLW 67 Query: 66 L-------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + ++ + +++V +EPC CA A+ + R+YYG SN + GG + Sbjct: 68 IKKNTSESYSQVFGKTEVWVNVEPCIQCAGALQILGFARVYYGCSNERFGGCGSVLDVCE 127 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146 +I GI + ++++DF++ Sbjct: 128 KDKRFQRLQIQGGIRANEAIELLKDFYR 155 >gi|308491803|ref|XP_003108092.1| hypothetical protein CRE_10287 [Caenorhabditis remanei] gi|308248940|gb|EFO92892.1| hypothetical protein CRE_10287 [Caenorhabditis remanei] Length = 171 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 48/149 (32%), Positives = 77/149 (51%), Gaps = 4/149 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ CA AQ A +E+PVG V V++ K I + NR E D T HAE++A+ Sbjct: 7 DNDRRFLECAFNLAQEALDGDEVPVGCVFVVDGKEIGKGRNRVNETGDPTRHAEMVAVTE 66 Query: 62 GCRILSQE---ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + +E L LYV+LEPC MC++A+ IR++ YGA NP+ GG+ + Sbjct: 67 MWKKYGEECKDFLRRAVLYVSLEPCIMCSSAMYQLGIRKMVYGAENPRFGGVRSVGN-AE 125 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + +I + RS +++ F+++ Sbjct: 126 KYRMEDNIQIVSNVWSDRSVAMLKSFYEK 154 >gi|254796483|ref|YP_003081319.1| tRNA-specific adenosine deaminase [Neorickettsia risticii str. Illinois] gi|254589716|gb|ACT69078.1| tRNA-specific adenosine deaminase [Neorickettsia risticii str. Illinois] Length = 139 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 55/142 (38%), Positives = 80/142 (56%), Gaps = 4/142 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ A+ + E+PVGAV V +I+ +GNR D TAHAE+L IR + L Sbjct: 1 MELAISVARESDC--EVPVGAVLVRQGAVIASSGNRVFRDSDPTAHAEMLVIREAIQRLG 58 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L + +LYVTLEPC MC A+SL+R+ L + A + K G I NG T H P Sbjct: 59 VKFLVDFELYVTLEPCPMCMYAMSLSRVGTLCFAAYDEKRGAISNGC--LGTGTYFHVPM 116 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 +Y G+ E +++++ FF+ R Sbjct: 117 VYEGLMEDEAKELLSSFFRILR 138 >gi|186476063|ref|YP_001857533.1| CMP/dCMP deaminase zinc-binding [Burkholderia phymatum STM815] gi|184192522|gb|ACC70487.1| CMP/dCMP deaminase zinc-binding [Burkholderia phymatum STM815] Length = 213 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 46/122 (37%), Positives = 66/122 (54%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V +++I++ N D +AHAE+ A+R L LP +LYVTLEPC Sbjct: 61 VPVGAVLVRGDEVIAKGFNHPIGGHDPSAHAEMAALRAAALTLENYRLPGCELYVTLEPC 120 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARI R+ YGA +PK G + + +H + G+ E+ ++ Sbjct: 121 LMCAGAIMHARIARVVYGARDPKTGACGSVVDAFANTQLNHHTTVTGGVLEEECAAALRA 180 Query: 144 FF 145 FF Sbjct: 181 FF 182 >gi|256851752|ref|ZP_05557140.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii 27-2-CHN] gi|260661531|ref|ZP_05862443.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii 115-3-CHN] gi|282933582|ref|ZP_06338952.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1] gi|297205374|ref|ZP_06922770.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii JV-V16] gi|256615710|gb|EEU20899.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii 27-2-CHN] gi|260547588|gb|EEX23566.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii 115-3-CHN] gi|281302325|gb|EFA94557.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1] gi|297149952|gb|EFH30249.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii JV-V16] Length = 150 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 4/147 (2%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A+E ++ A P GAV V +N+++ N+ D T HAE IR Sbjct: 2 NDEKFMQEAIELSKKAVEHGNEPFGAVLVKDNEVVFTNENQIFTANDPTFHAETGLIRRF 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGGIENGTQFYT 118 C L E LY + EPC MC+ A+ +++ R+ Y ASN G + Sbjct: 62 CTSTGITDLSEYTLYTSCEPCFMCSGAMVWSKLGRMVYAASNDDLEMTMGKHGSNCSKIV 121 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145 +++P + G+ + S +++ +F Sbjct: 122 FENYNNAPTVTSGVLREESVAVLKAYF 148 >gi|312792797|ref|YP_004025720.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312878594|ref|ZP_07738458.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus 6A] gi|311794629|gb|EFR11094.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus 6A] gi|312179937|gb|ADQ40107.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 143 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 51/142 (35%), Positives = 77/142 (54%), Gaps = 6/142 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M +E A + N+IPV A V + KI+S + + K HAEILAI LS Sbjct: 7 MKTLIEYASRS---NDIPVAAAVVKDGKIVSI---KRNDSKKAIYHAEILAIIDATSKLS 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L +++VT EPC MC +AI L++++RLY+GA + K G E+ +H E Sbjct: 61 TKDLRSCEMFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQHPFLNHKVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + GI E R +++ FF+E+R Sbjct: 121 VIGGICEDECRLLLKRFFEEKR 142 >gi|190689519|gb|ACE86534.1| adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae) protein [synthetic construct] gi|190690877|gb|ACE87213.1| adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae) protein [synthetic construct] Length = 160 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 8/142 (5%) Query: 14 EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL------S 67 A+ A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 1 MAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSP 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHS 125 E+ LYVT+EPC MCAAA+ L +I + YG N + GG + L Sbjct: 61 SEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRP 120 Query: 126 PEIYPGISEQRSRQIIQDFFKE 147 + PG + + ++++ F+K+ Sbjct: 121 FQCIPGYRAEEAVEMLKTFYKQ 142 >gi|294674240|ref|YP_003574856.1| guanine deaminase [Prevotella ruminicola 23] gi|294472550|gb|ADE81939.1| guanine deaminase [Prevotella ruminicola 23] Length = 158 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 3/139 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM A+ A + R P GAV V + +II+ + N D TAHAE+ IR Sbjct: 4 EQDKKFMREAIRLANESVERGGGPFGAVIVKDGEIIAGSSNSVTIDNDPTAHAEVNTIRK 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT--- 118 C L L +Y + EPC MC AI ARI +++YG + I+ F Sbjct: 64 ACFKLRTFDLSGCTIYTSCEPCPMCLGAIYWARIGKIFYGNTRKDARDIQFADDFIYEEL 123 Query: 119 LATCHHSPEIYPGISEQRS 137 + + Sbjct: 124 ERPMDKRTVPIVPLLRDEA 142 >gi|312136100|ref|YP_004003438.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor owensensis OL] gi|311776151|gb|ADQ05638.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor owensensis OL] Length = 143 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 52/142 (36%), Positives = 78/142 (54%), Gaps = 6/142 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M +E A ++ N+IPV A V + KIIS + + K HAEILAI LS Sbjct: 7 MKTLIEYASHS---NDIPVAAAVVKDGKIISI---KRNDSKKAIYHAEILAIIDATSKLS 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L +++VT EPC MC +AI L++++RLY+GA + K G E+ +H E Sbjct: 61 TKDLRSCEMFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQHPFLNHKVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + GI E R +++ FF+E+R Sbjct: 121 VIGGICEDECRLLLKRFFEEKR 142 >gi|148828084|ref|YP_001292837.1| hypothetical protein CGSHiGG_08090 [Haemophilus influenzae PittGG] gi|148719326|gb|ABR00454.1| hypothetical protein CGSHiGG_08090 [Haemophilus influenzae PittGG] Length = 125 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 53/115 (46%), Positives = 66/115 (57%), Gaps = 1/115 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMG 62 M ALE A A EIPVGAV V + + II N + D TAHAEI+A+R G Sbjct: 11 DEKMMRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNG 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + L LYVTLEPCTMCA AI +RI+RL +GAS+ K G I + F+ Sbjct: 71 AKNIQNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFLFF 125 >gi|126696279|ref|YP_001091165.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9301] gi|126543322|gb|ABO17564.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9301] Length = 171 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 6/150 (4%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59 K +MS L + + E+P+ ++ + + I R NR D HAEI+A+ Sbjct: 22 KYTKWMSSIL---RRSEEIGKVELPICSIILDERGRCIGRGVNRRNINNDPLGHAEIMAL 78 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R I + E + LEPCTMCA+A+ AR+ ++ +GA + K GG+ Sbjct: 79 RQASLIKNDWRFNECIIITNLEPCTMCASALIQARMGKVVFGAYDKKRGGLGGSIDLSKH 138 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + HH EI GI E + +Q +FK+ R Sbjct: 139 KSSHHKMEIVGGILEDECCKNLQLWFKKLR 168 >gi|284037689|ref|YP_003387619.1| CMP/dCMP deaminase zinc-binding protein [Spirosoma linguale DSM 74] gi|283816982|gb|ADB38820.1| CMP/dCMP deaminase zinc-binding protein [Spirosoma linguale DSM 74] Length = 158 Score = 160 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 4/147 (2%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + VF+ A++ A+ + P G+V V + +I+ + N D TAHAE++AIR Sbjct: 3 NQDEVFLREAIQLAREGMTTDQGGPFGSVIVRDGQIVGKGFNMVTSTNDPTAHAEVVAIR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118 CR L L LY + EPC MC AI AR R+ Y A + + QF Sbjct: 63 DACRNLGTFQLDGCTLYASCEPCPMCLGAIYWARPSRVVYAAQHADAASVGFDDQFIYEE 122 Query: 119 -LATCHHSPEIYPGISEQRSRQIIQDF 144 H + + + +++ Sbjct: 123 IDKPHEHRHIPMHQLLRDEAEAVFKEW 149 >gi|260425752|ref|ZP_05779732.1| cytidine/deoxycytidylate deaminase family protein [Citreicella sp. SE45] gi|260423692|gb|EEX16942.1| cytidine/deoxycytidylate deaminase family protein [Citreicella sp. SE45] Length = 149 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 81/117 (69%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 + ++++ AGNR REL D +AHAEILA+R C E LP DLYVTLEPC MCAAAIS Sbjct: 33 DGRVVAAAGNRTRELNDPSAHAEILALRAACADAGSERLPGHDLYVTLEPCPMCAAAISF 92 Query: 93 ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 AR+ RLYYGA++PK GG+ G + Y CHH PE+Y GI+ S +++ FF ERR Sbjct: 93 ARVARLYYGAADPKSGGVAQGARVYAHPQCHHVPEVYDGIAAAESETLLRGFFAERR 149 >gi|313606255|gb|EFR83242.1| tRNA-specific adenosine deaminase [Listeria monocytogenes FSL F2-208] Length = 116 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 39/108 (36%), Positives = 63/108 (58%) Query: 42 NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 N ++ HAE+LAI+ C+ + L +LYVTLEPC MC+ AI L+RI ++YYG Sbjct: 1 NLRETSQNAVTHAELLAIQDACKHQNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYG 60 Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A +PK G + +H+ E+ G+ E+ S ++++ FF++ R Sbjct: 61 AKDPKAGTAGSLMNLLQDDRFNHTCEVEAGLMEKESSEMLKSFFQDLR 108 >gi|302872756|ref|YP_003841392.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor obsidiansis OB47] gi|302575615|gb|ADL43406.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor obsidiansis OB47] Length = 143 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 52/142 (36%), Positives = 78/142 (54%), Gaps = 6/142 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M +E A ++ N+IPV A V + KIIS + + K HAEILAI LS Sbjct: 7 MKTLIEYASHS---NDIPVAAAVVKDGKIISI---KRNDSKKAIYHAEILAIIDATSKLS 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L +++VT EPC MC +AI L++++RLY+GA + K G E+ +H E Sbjct: 61 TKDLRSCEMFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQNPFLNHKVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + GI E R +++ FF+E+R Sbjct: 121 VIGGICEDECRLLLKRFFEEKR 142 >gi|296090277|emb|CBI40096.3| unnamed protein product [Vitis vinifera] Length = 205 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 17/159 (10%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A+++A+ A E+PVG V V + K+I+ NR E ++ T HAE+ AI + Sbjct: 29 AFMELAIQQAKLALDSLEVPVGCVIVEDGKLIATGRNRTTETRNATRHAEMEAIDVLLEQ 88 Query: 66 LSQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + EI + LYVT EPC MCAA++S+ I+ +YYG +N K GG + Sbjct: 89 WQKNGLSKLEVAEIFSKCSLYVTCEPCIMCAASLSILGIKEVYYGCANDKFGGCGSILSL 148 Query: 117 YTLA--------TCHHSPEIYPGISEQRSRQIIQDFFKE 147 ++ + + GI + ++Q F+++ Sbjct: 149 HSSSSKLLTSGTPLVKGFKCTGGIMATEAVSLLQRFYEQ 187 >gi|158318268|ref|YP_001510776.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec] gi|158113673|gb|ABW15870.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec] Length = 185 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 41/111 (36%), Positives = 56/111 (50%) Query: 37 ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96 + R N D TAHAE++A+R L L L VTLEPCTMCA A+ LAR+ Sbjct: 60 LGRGHNAREAAGDPTAHAEVVALRQAAARLGSWRLTGATLVVTLEPCTMCAGALVLARVD 119 Query: 97 RLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 RL YGA + K G + + +H PE+ G+ Q + + FF + Sbjct: 120 RLVYGAVDDKAGAVGSLWDVVRDRRLNHRPEVVAGVRGQECSEQLAAFFAD 170 >gi|326502722|dbj|BAJ98989.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 169 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 19/152 (12%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ------ 68 A+ A E+PVG V V N K+I+ NR ++ T HAE+ AI + + Sbjct: 1 AKFALDNLEVPVGCVIVENGKVIASGSNRTNATRNATRHAEMEAIDVLLQEWQSIGLDQT 60 Query: 69 ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT------- 118 E DLYVT EPC MCA+A+S+ IR +Y+G N K GG + + Sbjct: 61 LVAEKFAGCDLYVTCEPCIMCASALSILGIREVYFGCPNDKFGGCGSVMSLHESLLSDDL 120 Query: 119 ---LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 T + GI + + + ++F+++ Sbjct: 121 TGSQDTRSRGFKCTGGIMAEEAVALFRNFYEQ 152 >gi|281351029|gb|EFB26613.1| hypothetical protein PANDA_000408 [Ailuropoda melanoleuca] Length = 158 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 8/141 (5%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS------Q 68 A+ A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 1 AKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQALDWCHRSGKSPS 60 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSP 126 E+ LYVT+EPC MCAAA+ L +I + YG N + GG + L Sbjct: 61 EVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRPF 120 Query: 127 EIYPGISEQRSRQIIQDFFKE 147 + PG + + ++++ F+K+ Sbjct: 121 KCIPGYRAEEAVEMLKTFYKQ 141 >gi|237831707|ref|XP_002365151.1| tRNA-specific adenosine deaminase, putative [Toxoplasma gondii ME49] gi|211962815|gb|EEA98010.1| tRNA-specific adenosine deaminase, putative [Toxoplasma gondii ME49] gi|221487001|gb|EEE25247.1| tRNA-specific adenosine deaminase, putative [Toxoplasma gondii GT1] gi|221506684|gb|EEE32301.1| tRNA-specific adenosine deaminase, putative [Toxoplasma gondii VEG] Length = 178 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 12/157 (7%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIR 60 +FMS ALEEA+ A E+PVG V V +++SR N K+ T H E+ A+ Sbjct: 8 DKRLFMSAALEEARLALKEGEVPVGCVLVDSKTRQVVSRGRNATNRTKNATRHCELEALD 67 Query: 61 MGCRILSQE---------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 +L L +DL+VT EPC MCA A+ + ++R++YG N + GG Sbjct: 68 AYMALLPPPNIGGVEPRVDLSSIDLFVTCEPCVMCAVALQCSGVKRVFYGCGNDRFGGCG 127 Query: 112 NGTQFY-TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + F+ L+ E Y GI + + +++ F+ Sbjct: 128 SVLSFHKRLSEQWKGLECYSGIFREEAIDLLRSFYSR 164 >gi|242018582|ref|XP_002429753.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Pediculus humanus corporis] gi|212514765|gb|EEB17015.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Pediculus humanus corporis] Length = 188 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 7/146 (4%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M AL A+NA NE+PVG + V +N+II+ N E K+ T HAE+ I Sbjct: 16 WMKIALGFAENALKNNEVPVGCIFVYDNEIIANGANTVNETKNATRHAEMNCIDTVLSWC 75 Query: 67 SQEILPEVDLY------VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L +++ VT+EPC MC+AA+ +++R+ YG N + GG + Sbjct: 76 KERNLNFTEVFKAMDVVVTVEPCIMCSAALFELKVKRITYGCKNYRFGGCSTVFDISKIY 135 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 + + + G+ ++ S +++DF+K Sbjct: 136 R-NSNCVMVGGVYDEESINLLKDFYK 160 >gi|198426798|ref|XP_002125101.1| PREDICTED: similar to deaminase domain containing 1 [Ciona intestinalis] Length = 178 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 21/168 (12%) Query: 1 MKKG--NVFMSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEIL 57 M +M+ A A++A E+PVG V V NK +S N+ E K+ T HAE++ Sbjct: 1 MNSDVLLKWMNEAFNYAEDALKEGEVPVGCVLVYKNKEKLSNGRNKVNETKNATRHAELV 60 Query: 58 AIRMGCR--------------ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 AI + ++ +YVT+EPC MC A+ +I + +G + Sbjct: 61 AIDNAIKTVTSDSWKQSLPNDWKFTDVFEHCVMYVTVEPCIMCCGAMRAMKIPLVVFGCN 120 Query: 104 NPKGGGIENGTQFYTLATCH----HSPEIYPGISEQRSRQIIQDFFKE 147 N + GG + ++ + Y G R+ +++DF+K+ Sbjct: 121 NERFGGCGSVLSLHSNRKLNSSLGPVISTYGGQQTVRAITLLKDFYKQ 168 >gi|327356422|gb|EGE85279.1| tRNA specific adenosine deaminase [Ajellomyces dermatitidis ATCC 18188] Length = 174 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 42/135 (31%), Positives = 70/135 (51%) Query: 13 EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72 E+ + A E PVG V V N+++I N + + T HAE LAI R + I Sbjct: 3 EKGEEALASGETPVGCVLVHNDEVIGSGMNDTNKSMNGTRHAEFLAIEEVLRSHPRSIFR 62 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132 E DLYVT+EPC MCA+A+ +IR +Y+G +N + GG + ++ + G+ Sbjct: 63 ETDLYVTVEPCIMCASALRQYQIRHVYFGCANERFGGTGGVLKLHSDPGIDPPYGLTGGL 122 Query: 133 SEQRSRQIIQDFFKE 147 + + +++ F+ + Sbjct: 123 FRKEAIMLLRRFYIQ 137 >gi|296114354|ref|ZP_06833008.1| CMP/dCMP deaminase [Gluconacetobacter hansenii ATCC 23769] gi|295979115|gb|EFG85839.1| CMP/dCMP deaminase [Gluconacetobacter hansenii ATCC 23769] Length = 173 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 51/117 (43%), Positives = 76/117 (64%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 + I+S AGNR+ E D +AHAE+LA+R RI + L + LYVTLEPC MCA A Sbjct: 55 DGAILSCAGNRSEEWHDPSAHAEMLALREATRIRGGQRLSDCALYVTLEPCPMCAGAAVH 114 Query: 93 ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 RI R+ +GA +PKGGG+++G + + C H PE+ G+ E+ ++ +++ FF+ RR Sbjct: 115 FRIGRILFGAYDPKGGGVDHGPRLFARPGCLHRPEVIGGLREREAQDMLRAFFRNRR 171 >gi|325117380|emb|CBZ52932.1| Cytidine and deoxycytidylate deaminase family protein, related [Neospora caninum Liverpool] Length = 348 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 12/157 (7%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIR 60 +FMS ALEEA++A E+PVG V V +++++ N K+ T H E+ A+ Sbjct: 178 DKRLFMSAALEEARSALQEGEVPVGCVLVDSRTRQVVAKGRNATNRTKNATRHCELEALD 237 Query: 61 MGCRILSQEILPEV---------DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 + + DL+VT EPC MCA A+ + I+R++YG N + GG Sbjct: 238 AYMARFPPTRIGDSEAPVDMSSIDLFVTCEPCVMCAVALQCSGIKRVFYGCGNDRFGGCG 297 Query: 112 NGTQFYTLATCHHS-PEIYPGISEQRSRQIIQDFFKE 147 + F+ + H + E PGI + + +++ F+ Sbjct: 298 SVLSFHKKLSAHWTGLECCPGIFREEAIDLLRSFYSR 334 >gi|17554608|ref|NP_498663.1| hypothetical protein R13A5.10 [Caenorhabditis elegans] gi|15144367|gb|AAK84461.1|AC006679_2 Hypothetical protein R13A5.10 [Caenorhabditis elegans] Length = 153 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 1/120 (0%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A+EEA+ + + P GAV V + K+I N KD TAHAE+ AIR C+ Sbjct: 3 FMKLAIEEAKKGMEKGDGGPFGAVIVKDGKVIGSGHNMVLVTKDPTAHAEVTAIRNTCKN 62 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L LY + PC MC A +R+ +YYGA++ I G + + Sbjct: 63 VDNFDLSGCQLYTSCYPCPMCMGAALWSRVDAIYYGATSQDAANIGFGDHEFHEFLQNPK 122 >gi|303277403|ref|XP_003057995.1| cytidine/deoxycytidylate deaminase family protein [Micromonas pusilla CCMP1545] gi|226460652|gb|EEH57946.1| cytidine/deoxycytidylate deaminase family protein [Micromonas pusilla CCMP1545] Length = 201 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 55/177 (31%), Positives = 78/177 (44%), Gaps = 35/177 (19%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 MS A+EEA+ A+ R E+PVGAV V ++++ N E D TAHAE+ IR G + Sbjct: 1 MSLAIEEAKLASRRLEVPVGAVLVRASTGEVLASHHNTVDEEDDPTAHAELKCIRDGAKR 60 Query: 66 LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-------- 116 L L E LYVTLEPC MCA A+ AR+ + +GA NP GG + Sbjct: 61 LGGWRYLAETTLYVTLEPCPMCAGAVLNARLGEVVWGAPNPLIGGDGSWLPIMGDGGGAD 120 Query: 117 ------------------------YTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + + E+ +++ FF+ERR Sbjct: 121 VAEADVDEPEDAVRSCSIPGGGGPVRPHAFKPTLVVRRRVLEEECAALMRSFFRERR 177 >gi|308474568|ref|XP_003099505.1| hypothetical protein CRE_01142 [Caenorhabditis remanei] gi|308266694|gb|EFP10647.1| hypothetical protein CRE_01142 [Caenorhabditis remanei] Length = 153 Score = 158 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 5/120 (4%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A+EEA+ + + P GAV V + K+I N KD TAHAE+ AIR C+ Sbjct: 3 FMKLAIEEAKKGMAKGDGGPFGAVIVKDGKVIGVGHNMVLVNKDPTAHAEVTAIRDACKN 62 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT----QFYTLAT 121 + L LY + PC MC A +R+ +YYGA++ I G F Sbjct: 63 VDNFDLSGCQLYTSCYPCPMCMGAALWSRVDAVYYGATSEDAASIGFGDHEFHDFLKDPK 122 >gi|152992774|ref|YP_001358495.1| cytidine/deoxycytidylate deaminase family protein [Sulfurovum sp. NBC37-1] gi|151424635|dbj|BAF72138.1| cytidine/deoxycytidylate deaminase family protein [Sulfurovum sp. NBC37-1] Length = 153 Score = 158 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 43/146 (29%), Positives = 63/146 (43%), Gaps = 3/146 (2%) Query: 5 NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + FM A EA+ + P GAV V + KII+ N + D TAHAE++AIR Sbjct: 2 DPFMREAFLEAKRGIEAGDGGPFGAVIVKDGKIIASGHNEVVKTNDPTAHAEMIAIRNAS 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L L LYVT EPC MC +AI A I R+YY + I T Sbjct: 62 AKLQNFKLEGCTLYVTGEPCPMCFSAIHWAHIERVYYCNTKEDAARIGFDDSLITEIILG 121 Query: 124 HSPEIYP--GISEQRSRQIIQDFFKE 147 + ++ + + ++++ Sbjct: 122 KKKDPVSFMHTPHEQCQTLFSVWYED 147 >gi|78212739|ref|YP_381518.1| tRNA-adenosine deaminase [Synechococcus sp. CC9605] gi|78197198|gb|ABB34963.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. CC9605] Length = 174 Score = 158 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 1/137 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M L+ A+ L E+PV AV + + I NR +D HAE++A++ + Sbjct: 27 WMDVLLQRAEGVGLEGEVPVAAVILDGQGRAIGHGRNRRENNRDPLGHAELVALQQAAIV 86 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + L VTLEPC MCA A+ AR+ + + AS+PK GG+ T A+ HH Sbjct: 87 QNDWRFNNCTLIVTLEPCPMCAGALVQARMGTVVFAASDPKRGGLGGSLDLSTHASAHHH 146 Query: 126 PEIYPGISEQRSRQIIQ 142 ++ + E +R+ ++ Sbjct: 147 MKVIQSVREPEAREQLE 163 >gi|225013101|ref|ZP_03703515.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-2A] gi|225002759|gb|EEG40741.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-2A] Length = 154 Score = 158 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 7/150 (4%) Query: 1 MK-KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M+ FM AL EA+ AA +E+PVGAV V+ +II+RA N L DVTAHAE+ AI Sbjct: 10 MELDDQYFMKQALAEAEKAAFADEVPVGAVVVVEQRIIARAHNLTERLHDVTAHAEMQAI 69 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L+ + L LYVTLEPC MCA A+ ++ R+ +GAS+ K G + Sbjct: 70 TAAANYLNGKYLVGCTLYVTLEPCVMCAGALVWSQFDRVVFGASDSKRGFQQANLDL--- 126 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ + ++ ++ FF ++R Sbjct: 127 ---HPKTILSGGVLAEEAKALLDAFFAKKR 153 >gi|227506029|ref|ZP_03936078.1| nucleoside deaminase [Corynebacterium striatum ATCC 6940] gi|227197311|gb|EEI77359.1| nucleoside deaminase [Corynebacterium striatum ATCC 6940] Length = 156 Score = 158 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 49/140 (35%), Positives = 65/140 (46%), Gaps = 3/140 (2%) Query: 12 LEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-E 69 LE A+ +IPVGAV +S NR + D TAHAE+ AIR Sbjct: 18 LEVARQTPA-GDIPVGAVLYDAAGNELSTGVNRREQRGDPTAHAEVEAIRAAVAKHGNGW 76 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 L ++ VTLEPC MCA AI AR+ + +GA PK G + H PE+ Sbjct: 77 RLEGCEIVVTLEPCAMCAGAIQGARVASVVFGAFEPKTGACGSLVDVLRAPGSLHVPEVR 136 Query: 130 PGISEQRSRQIIQDFFKERR 149 G+ E+ ++ FF E R Sbjct: 137 AGVCEEECAGLLTGFFGELR 156 >gi|302559794|ref|ZP_07312136.1| cytidine and deoxycytidylate deaminase [Streptomyces griseoflavus Tu4000] gi|302477412|gb|EFL40505.1| cytidine and deoxycytidylate deaminase [Streptomyces griseoflavus Tu4000] Length = 107 Score = 158 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 40/107 (37%), Positives = 57/107 (53%) Query: 42 NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 N D TAHAE+LA+R L + L L VTLEPCTMCA AI +R+ R+ YG Sbjct: 1 NEREAAGDPTAHAEVLALRRAAAELGEWRLAGCTLVVTLEPCTMCAGAIQQSRVDRVVYG 60 Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 A + K G + +H PE+ G+ + +++ +FF+ER Sbjct: 61 ARDEKAGAAGSLWDLVRDRRLNHRPEVIEGVLSEECARLLTEFFRER 107 >gi|295687633|ref|YP_003591326.1| CMP/dCMP deaminase zinc-binding protein [Caulobacter segnis ATCC 21756] gi|295429536|gb|ADG08708.1| CMP/dCMP deaminase zinc-binding protein [Caulobacter segnis ATCC 21756] Length = 148 Score = 158 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 56/130 (43%), Positives = 79/130 (60%), Gaps = 2/130 (1%) Query: 22 NEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 E PVGAV + ++++ AGN D TAHAEI A+R L L ++ L VT Sbjct: 15 GETPVGAVILDPKTGEVLAVAGNGPIAAHDPTAHAEIAAMRAAAAKLENYRLTDLTLVVT 74 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA AIS ARI R+ +GA +PKGG + +G +F+ TCH PE+ G+ + S + Sbjct: 75 LEPCAMCAGAISHARIGRVVFGAEDPKGGAVVHGPKFFAQPTCHWRPEVTGGVLAEESAE 134 Query: 140 IIQDFFKERR 149 +++ FF+ RR Sbjct: 135 LLRGFFRARR 144 >gi|111220122|ref|YP_710916.1| tRNA-specific adenosine deaminase [Frankia alni ACN14a] gi|111147654|emb|CAJ59309.1| tRNA-specific adenosine deaminase [Frankia alni ACN14a] Length = 163 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 15/156 (9%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL--------NNKIISRAGNRNRELKDVTAH 53 M AL +A+ A ++ ++ N D TAH Sbjct: 10 SDHEAAMGLALAQARLAPEHGDV-------PVGAVVVGPEGTVLGAGRNTRERDGDPTAH 62 Query: 54 AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 AE+LA+R + L L VTLEPCTMCA A+ LAR+ RL YGA + K G + + Sbjct: 63 AEVLALRAAAARVGSWRLSGATLVVTLEPCTMCAGALVLARVDRLVYGAVDDKAGAVGSL 122 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H PE+ G+ ++ DFF RR Sbjct: 123 WDVVRDRRLNHRPEVISGVRAAECATLLADFFTARR 158 >gi|255628537|gb|ACU14613.1| unknown [Glycine max] Length = 182 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 17/159 (10%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A+++A+ A E+PVG V + K+I+ NR E ++ T HAE+ AI + Sbjct: 8 AFMELAIQQARLALDVLEVPVGCVIAEDGKVIASGRNRTTETRNATRHAEMEAIDVLLGQ 67 Query: 66 LSQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + E LYVT EPC MCA+A+S+ I+ ++YG SN K GG + Sbjct: 68 WQKHGLSMSEVAEKFSNCSLYVTCEPCIMCASALSILGIKEVFYGCSNDKFGGCGSILSL 127 Query: 117 YTLATCHHSPEIYPG--------ISEQRSRQIIQDFFKE 147 + T + E+ G I + + + F+++ Sbjct: 128 HLSNTAPLNNEVPSGKCFKCTGRIMASEAVLLFRTFYEQ 166 >gi|227496672|ref|ZP_03926948.1| cytosine deaminase [Actinomyces urogenitalis DSM 15434] gi|226833820|gb|EEH66203.1| cytosine deaminase [Actinomyces urogenitalis DSM 15434] Length = 154 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 49/128 (38%), Positives = 68/128 (53%), Gaps = 1/128 (0%) Query: 23 EIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV + ++I+ A N D TAHAE+ A+R L+ L L VTLE Sbjct: 27 EVPVGAVVLDPGGRVIAEAANARETEHDPTAHAEVRALRAAGARLADSHLDGCTLVVTLE 86 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PCTMCA AI LAR++R+ GA PK G + +H E+ G+ S ++ Sbjct: 87 PCTMCAGAIQLARLQRVVLGAWEPKTGACGSVRDVLRDPRANHQVEVVAGVGASESEALL 146 Query: 142 QDFFKERR 149 ++FF RR Sbjct: 147 REFFARRR 154 >gi|251798037|ref|YP_003012768.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2] gi|247545663|gb|ACT02682.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2] Length = 155 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 4/149 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +FM A++ ++ A P GAV V N +I+ N+ D T HAE +R Sbjct: 1 MNQDEIFMREAIKLSKLAVEHGNEPFGAVLVKNGEIVYSNENQIYSATDPTFHAEAGLLR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG----GIENGTQF 116 C L E LY + EPC MC+ A+ R+ RL Y AS+ + Sbjct: 61 RFCAETHITDLREYTLYSSCEPCFMCSGAMVWTRLGRLVYAASDMDLCNLLDAKGSPCSG 120 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145 HH PE+ GI ++ S ++ D+F Sbjct: 121 IVFKHSHHKPEVLGGILKEESLSVLADYF 149 >gi|124009723|ref|ZP_01694394.1| guanine deaminase [Microscilla marina ATCC 23134] gi|123984327|gb|EAY24671.1| guanine deaminase [Microscilla marina ATCC 23134] Length = 158 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 1/120 (0%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + F++ A+E A N P GAV V N +II+ NR +D TAHAE++AIR Sbjct: 3 ENHERFINRAIELATQGMDSNSGGPFGAVVVKNGEIIAEGHNRVTSTQDPTAHAEVVAIR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C++L+ L + +Y + EPC MC AI AR + +YY + I Q Sbjct: 63 EACKVLNTFQLDDCVIYTSCEPCPMCLGAIYWARPKAVYYACNREDAAHIGFDDQLIYDE 122 >gi|325287796|ref|YP_004263586.1| Guanine deaminase [Cellulophaga lytica DSM 7489] gi|324323250|gb|ADY30715.1| Guanine deaminase [Cellulophaga lytica DSM 7489] Length = 156 Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 42/115 (36%), Positives = 56/115 (48%), Gaps = 1/115 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A+ A NE P G V V + KII + N+ D TAHAE+ AIR Sbjct: 2 SDDKFMQEAVNAALKGMQNNEGGPFGCVIVKDGKIIGKGNNKVTSTNDPTAHAEVTAIRD 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 C+ L+ L +Y + EPC MC AI AR ++YYG+S I +F Sbjct: 62 ACKNLNSFQLDGCIIYTSCEPCPMCLGAIYWARPEKVYYGSSQADAANIGFDDEF 116 >gi|33240486|ref|NP_875428.1| cytosine/adenosine deaminase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238014|gb|AAQ00081.1| Cytosine/adenosine deaminase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 164 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 1/146 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + +M + A+ E+P+ A+ + I N + D HAE++A+R Sbjct: 15 HRWMMILRKRAKIVGKEGEVPITAIILNEKGHCIGHGRNTRNKRFDPMGHAELVALRQAA 74 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + E L VTLEPC MCA A+ AR+ R+ +GA + K GG+ T + H Sbjct: 75 WLKGDWRFNECTLIVTLEPCQMCAGALIQARMGRVIFGAYDFKRGGLGGTLDLSTHKSAH 134 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ ++ +Q I+++F RR Sbjct: 135 HKMIVKGGVMKKEIKQEIEEWFSLRR 160 >gi|21355527|ref|NP_650610.1| CG5292 [Drosophila melanogaster] gi|7300237|gb|AAF55401.1| CG5292 [Drosophila melanogaster] gi|18447473|gb|AAL68299.1| RE41712p [Drosophila melanogaster] gi|220948458|gb|ACL86772.1| CG5292-PA [synthetic construct] gi|220960450|gb|ACL92761.1| CG5292-PA [synthetic construct] Length = 160 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 9/147 (6%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL EA+ A E+PVG V V +K+++R GN ++ T HAE + I Sbjct: 3 AFMEEALVEARRARDAGEVPVGCVFVHGDKVVARGGNEVNVHRNATRHAEFICIDAILAS 62 Query: 66 LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + LP E+ + VT+EPC MC+AA+ ++ + YG N + GG T Sbjct: 63 CRERRLPARQLFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVA 119 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146 A H EI G+ + +++DF+K Sbjct: 120 AVVGHRIEITGGVRADEAMALLKDFYK 146 >gi|195349159|ref|XP_002041114.1| GM15219 [Drosophila sechellia] gi|194122719|gb|EDW44762.1| GM15219 [Drosophila sechellia] Length = 160 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 9/147 (6%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL EA+ A E+PVG V V K+++R GN ++ T HAE + I Sbjct: 3 AFMEEALVEARRARDAGEVPVGCVFVHGGKVVARGGNEVNVHRNATRHAEFICIDAILAT 62 Query: 66 LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 ++ LP E+ + VT+EPC MC+AA+ ++ + YG N + GG T Sbjct: 63 CREKRLPARQLFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVA 119 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146 A H EI G+ + ++++F+K Sbjct: 120 AVVGHRIEITGGVRADEAMALLKEFYK 146 >gi|310657385|ref|YP_003935106.1| guanine deaminase [Clostridium sticklandii DSM 519] gi|308824163|emb|CBH20201.1| guanine deaminase [Clostridium sticklandii] Length = 154 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 6/145 (4%) Query: 5 NVFMSCALEEAQNA-ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + FM A++EA LR P GAV V +NK+I+R N+ E D TAHAEI+AIR Sbjct: 2 DEFMKEAIKEAFEGIGLRAGGPFGAVIVKDNKVIARGHNKVIETNDPTAHAEIVAIREAT 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN----GTQFYTL 119 ++L + L + LY T EPC MC +A A+I +YYGA+ I + Sbjct: 62 KLLGRFDLSDCILYTTCEPCPMCYSAAHWAKIPLIYYGATQDDAKDIGFDDSYIYEVLQN 121 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 + +I I ++ + + + Sbjct: 122 KHSNEKMKICQ-IDREQCLEPFRKY 145 >gi|110679276|ref|YP_682283.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter denitrificans OCh 114] gi|109455392|gb|ABG31597.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter denitrificans OCh 114] Length = 155 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 71/131 (54%), Positives = 89/131 (67%), Gaps = 1/131 (0%) Query: 20 LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78 R E+PVGAV V + II+ AGN+ R D TAHAEILAIR C +L E L + LYV Sbjct: 25 KRGEVPVGAVIVAPDGAIIAAAGNQTRADHDPTAHAEILAIRRACAVLGSERLLDHALYV 84 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 TLEPC MCAAAIS ARI RLYYGAS+PK GG+ G + ++ CHH+PE++ GI+ S Sbjct: 85 TLEPCAMCAAAISAARISRLYYGASDPKSGGVAQGARVFSHPQCHHAPEVFDGIAAAESE 144 Query: 139 QIIQDFFKERR 149 +++ FF RR Sbjct: 145 AMLRGFFTARR 155 >gi|226226900|ref|YP_002761006.1| putative deaminase [Gemmatimonas aurantiaca T-27] gi|226090091|dbj|BAH38536.1| putative deaminase [Gemmatimonas aurantiaca T-27] Length = 144 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 58/128 (45%), Positives = 72/128 (56%), Gaps = 2/128 (1%) Query: 24 IPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 +PVGAV + +II RA NR R D TAHAE+LA+R RI L E L VTLE Sbjct: 17 VPVGAVVMRTETGEIIVRAQNRMRRDGDATAHAEVLALREAARIAGDARLGEFTLVVTLE 76 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA AI LARI L +GA + K G + A +H P + G+ E +R ++ Sbjct: 77 PCAMCAGAIVLARIGALAFGAWDEKAGMCGSVGDIVRHARLNHRPAVQGGVLESENRALL 136 Query: 142 QDFFKERR 149 Q FF ERR Sbjct: 137 QQFFAERR 144 >gi|319760657|ref|YP_004124595.1| tRNA-specific adenosine deaminase [Candidatus Blochmannia vafer str. BVAF] gi|318039371|gb|ADV33921.1| tRNA-specific adenosine deaminase [Candidatus Blochmannia vafer str. BVAF] Length = 155 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 2/148 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 ++M A+ A AAL + +GAV V + +++ N D +AHAEI+A+R+G Sbjct: 8 DIIWMRYAITLASVAALSGNVAIGAVLVYDGRLVGYGYNAALIFHDPSAHAEIIALRVGG 67 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ--FYTLAT 121 L L LYVT+EPC MC AI ARI RL GA K I F A Sbjct: 68 NYLGNYRLLNTTLYVTMEPCIMCVGAIINARIHRLVCGAIGNKIRWINLLRINYFIDHAM 127 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H +I G+ + + I+DFFK +R Sbjct: 128 INHQCDIKTGVLSEVCSKQIRDFFKYKR 155 >gi|307209295|gb|EFN86380.1| tRNA-specific adenosine deaminase 2 [Harpegnathos saltator] Length = 175 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 8/147 (5%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M AL++A+ + E+PVG + V NN+ I+ N E + T HAEI I R Sbjct: 5 AWMDAALQKAEESLREGEVPVGCLFVYNNEAIATGNNTVNETCNATRHAEINCIDQVLRF 64 Query: 66 LSQEILPEVDLY------VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 ++ L ++ VT+EPC MC +A+ R+R + YG +N + GG + + Sbjct: 65 CKEKQLEHETVFRNLDVIVTVEPCIMCVSALLQLRVRSIVYGCANDRFGGCTSVLEVPNF 124 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146 I + + +++++F+K Sbjct: 125 YD--PKITIQGNVKADEAMKLLKNFYK 149 >gi|295133748|ref|YP_003584424.1| guanine deaminase [Zunongwangia profunda SM-A87] gi|294981763|gb|ADF52228.1| guanine deaminase [Zunongwangia profunda SM-A87] Length = 158 Score = 156 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 41/139 (29%), Positives = 58/139 (41%), Gaps = 4/139 (2%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM A+ A+ P GAV V + +II+ N D TAHAEI AIR Sbjct: 3 EDDKKFMRRAIALAEEGMNTGAGGPFGAVVVKDGEIIAEGWNIVTSSNDPTAHAEITAIR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118 C L+ L LY + EPC MC AI AR ++++Y ++ I QF Sbjct: 63 RACENLNTFQLENCVLYTSCEPCPMCLGAIYWARPKKVFYALNHSDAAKIGFDDQFIYEE 122 Query: 119 -LATCHHSPEIYPGISEQR 136 + + I + Sbjct: 123 LDKDIENRKVPFVNILREE 141 >gi|68304978|gb|AAY89989.1| unknown [uncultured bacterium BAC13K9BAC] Length = 157 Score = 156 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 51/150 (34%), Positives = 85/150 (56%), Gaps = 2/150 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAI 59 ++ ++F A A A ++E+PVGAV + ++ ++IS N+ ++ + HAE+LA+ Sbjct: 3 QQYHLFYELAYNLALVAYNQDEVPVGAVIIKDSTFEVISSGYNKMKQNRSSIDHAEMLAL 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + L+ E L + TLEPC MCA AIS AR+ + + A + K GG+ NG Y Sbjct: 63 KTAMTRLNNERLKGCSMITTLEPCPMCAQAISFARLSSIIFSAEDKKSGGVINGPVIYNS 122 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 ++CHH P I RS ++++ FF+ +R Sbjct: 123 SSCHHKPSIIRFNDNGRSTKLLKKFFQNKR 152 >gi|262200337|ref|YP_003271545.1| CMP/dCMP deaminase zinc-binding protein [Gordonia bronchialis DSM 43247] gi|262083684|gb|ACY19652.1| CMP/dCMP deaminase zinc-binding protein [Gordonia bronchialis DSM 43247] Length = 143 Score = 156 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 53/128 (41%), Positives = 72/128 (56%), Gaps = 2/128 (1%) Query: 24 IPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTLE 81 +P+GAV I ++RA NR D TAHAEILA+R LP + VT+E Sbjct: 16 VPIGAVVFDPGGIELARAANRREADADPTAHAEILALRAAAAAFGDGWRLPGCTIAVTVE 75 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PCTMCA AI+LARI L +GA PK G + + H P++ GI E R R+++ Sbjct: 76 PCTMCAGAITLARIDTLLFGAWEPKTGAVGSLWDVVRDPRLTHRPQVRGGIFEDRCRELM 135 Query: 142 QDFFKERR 149 DFF+++R Sbjct: 136 IDFFQQQR 143 >gi|163733416|ref|ZP_02140859.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter litoralis Och 149] gi|161393204|gb|EDQ17530.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter litoralis Och 149] Length = 149 Score = 156 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 69/131 (52%), Positives = 88/131 (67%), Gaps = 1/131 (0%) Query: 20 LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78 R E+PVGAV V + II+ AGN+ R D TAHAE+LAIR C +L E L + LYV Sbjct: 19 KRGEVPVGAVVVDPDGLIIAAAGNQTRADLDPTAHAEMLAIRRACAVLGTERLIDHALYV 78 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 TLEPC MCAAAIS ARI RLYYGA +PK GG+ G + ++ CHH+PE++ GI+ S Sbjct: 79 TLEPCAMCAAAISAARISRLYYGAGDPKSGGVAQGARVFSHPQCHHAPEVFDGIAAAESE 138 Query: 139 QIIQDFFKERR 149 +++ FF RR Sbjct: 139 AMLKGFFTARR 149 >gi|149744219|ref|XP_001497309.1| PREDICTED: similar to deaminase domain containing 1 [Equus caballus] Length = 186 Score = 156 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 8/141 (5%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI------LSQ 68 A+ A E+PVG + V NN+++ + N + K+ T HAE++AI Sbjct: 28 AKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQALAWCRGRGRCPA 87 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSP 126 E+ LYVT+EPC MCAAA+ L +I + YG N + GG + L Sbjct: 88 EVFERAVLYVTVEPCVMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRPF 147 Query: 127 EIYPGISEQRSRQIIQDFFKE 147 + PG + + ++++ F+K+ Sbjct: 148 QCVPGYRAEEAVEMLKTFYKQ 168 >gi|148271718|ref|YP_001221279.1| putative cytosine/adenosine deaminase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829648|emb|CAN00564.1| putative cytosine/adenosine deaminase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 149 Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL+EA+ A ++PVGAV V + + I R N +D TAHAE+ A+R + Sbjct: 1 MAVALDEARACAATGDVPVGAVVVDADGVVIGRGRNLREARQDPTAHAEVEALREAAAVT 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L L VTLEPC MCA AI AR+ R+ +GA + K G + H Sbjct: 61 GDRHLVGTTLVVTLEPCVMCAGAILAARVPRVVFGAWDEKAGAAGSLYDVLRDRRLPHRA 120 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E++ G++ + ++ FF RR Sbjct: 121 EVFAGVAAEECAALLDGFFAGRR 143 >gi|254995140|ref|ZP_05277330.1| cytosine deaminase (ssnA) [Anaplasma marginale str. Mississippi] gi|255003311|ref|ZP_05278275.1| cytosine deaminase (ssnA) [Anaplasma marginale str. Puerto Rico] gi|255004436|ref|ZP_05279237.1| cytosine deaminase (ssnA) [Anaplasma marginale str. Virginia] Length = 153 Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 69/150 (46%), Positives = 94/150 (62%), Gaps = 5/150 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAI 59 M + +M A++EA ++ E+PVGAV V ++ S N D TAHAE+LAI Sbjct: 2 MLSESPYMRLAMQEAVSSPA--EVPVGAVVVDERGVVVSSRHNLTLRNSDPTAHAEMLAI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R C LS +L D+YVTLEPC MCA AISL+RIRRLY+GA N K GG+E+G + + Sbjct: 60 REACLHLSTHVLDNCDMYVTLEPCAMCAYAISLSRIRRLYFGAYNAKCGGVEHGARVFRF 119 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 CHH PE+Y G E+ + +I++ FF + R Sbjct: 120 --CHHIPEVYGGFLERENAEILKSFFYKLR 147 >gi|108805662|ref|YP_645599.1| tRNA-adenosine deaminase [Rubrobacter xylanophilus DSM 9941] gi|108766905|gb|ABG05787.1| tRNA-adenosine deaminase [Rubrobacter xylanophilus DSM 9941] Length = 167 Score = 156 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 48/126 (38%), Positives = 66/126 (52%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV ++++ A N D TAHAE+LAIR L L LY TLEPC Sbjct: 38 VPVGAVVARGEEVLALASNEREATGDPTAHAELLAIRRAAAALGGWRLTGCTLYSTLEPC 97 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA A AR+ R+ Y A +PK G + +H+ + G+ Q S +++D Sbjct: 98 PMCAGAAWAARLSRIVYAAPDPKAGYAGTLHNTPSDRRLNHTASVLGGLLAQESATLLRD 157 Query: 144 FFKERR 149 FF+ERR Sbjct: 158 FFRERR 163 >gi|257067545|ref|YP_003153800.1| tRNA-adenosine deaminase [Brachybacterium faecium DSM 4810] gi|256558363|gb|ACU84210.1| tRNA-adenosine deaminase [Brachybacterium faecium DSM 4810] Length = 162 Score = 156 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 48/119 (40%), Positives = 65/119 (54%), Gaps = 1/119 (0%) Query: 24 IPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 +P+GAV V + +++ AGNR +D TAHAEILA+R + L L VTLEP Sbjct: 34 VPIGAVVVAPDGAVLATAGNRREADEDPTAHAEILALRRAAAATGRWNLTGCTLVVTLEP 93 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 CTMCA AI LARIRR+ GA +PK G + +H E+ G+ Q ++ Sbjct: 94 CTMCAGAIVLARIRRVVVGAMDPKAGAAGSLYDLVREPRLNHRVELVTGVRGQECGDLL 152 >gi|222475328|ref|YP_002563745.1| cytosine deaminase (ssnA) [Anaplasma marginale str. Florida] gi|222419466|gb|ACM49489.1| cytosine deaminase (ssnA) [Anaplasma marginale str. Florida] Length = 154 Score = 156 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 68/150 (45%), Positives = 94/150 (62%), Gaps = 5/150 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRA-GNRNRELKDVTAHAEILAI 59 M + +M A++EA ++ E+PVGAV V ++ + N D TAHAE+LAI Sbjct: 3 MLSESPYMRLAMQEAVSSPA--EVPVGAVVVDERGVVVSSKHNLTLRNSDPTAHAEMLAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R C LS +L D+YVTLEPC MCA AISL+RIRRLY+GA N K GG+E+G + + Sbjct: 61 REACLHLSTHVLDNCDMYVTLEPCAMCAYAISLSRIRRLYFGAYNAKCGGVEHGARVFRF 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 CHH PE+Y G E+ + +I++ FF + R Sbjct: 121 --CHHIPEVYGGFLERENAEILKSFFYKLR 148 >gi|56416962|ref|YP_154036.1| cytosine deaminase [Anaplasma marginale str. St. Maries] gi|56388194|gb|AAV86781.1| cytosine deaminase [Anaplasma marginale str. St. Maries] Length = 154 Score = 156 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 69/150 (46%), Positives = 94/150 (62%), Gaps = 5/150 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAI 59 M + +M A++EA ++ E+PVGAV V ++ S N D TAHAE+LAI Sbjct: 3 MLSESPYMRLAMQEAVSSPA--EVPVGAVVVDERGVVVSSRHNLTLRNSDPTAHAEMLAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R C LS +L D+YVTLEPC MCA AISL+RIRRLY+GA N K GG+E+G + + Sbjct: 61 REACLHLSTHVLDNCDMYVTLEPCAMCAYAISLSRIRRLYFGAYNAKCGGVEHGARVFRF 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 CHH PE+Y G E+ + +I++ FF + R Sbjct: 121 --CHHIPEVYGGFLERENAEILKSFFYKLR 148 >gi|222530354|ref|YP_002574236.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor bescii DSM 6725] gi|222457201|gb|ACM61463.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor bescii DSM 6725] Length = 143 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 51/142 (35%), Positives = 77/142 (54%), Gaps = 6/142 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M +E A + N+IPV A V + +IIS + + K HAEILAI LS Sbjct: 7 MKTLIEYASRS---NDIPVAAAVVKDRRIISI---KRNDSKKAIYHAEILAIIDATSKLS 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + L +++VT EPC MC +AI L++++RLY+GA + K G E+ +H E Sbjct: 61 TKDLRSCEMFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQNPFLNHKVE 120 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + GI E R +++ FF+E+R Sbjct: 121 VIGGICEDECRLLLKRFFEEKR 142 >gi|78778025|ref|YP_394340.1| guanine deaminase [Sulfurimonas denitrificans DSM 1251] gi|78498565|gb|ABB45105.1| Guanine deaminase [Sulfurimonas denitrificans DSM 1251] Length = 149 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 5/141 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K ++FM A++EA R + P GAV V + K+I++A NR +L D TAHAEI AIR Sbjct: 2 KHSIFMKKAIKEATFGVERGDGGPFGAVIVKDGKVIAKAHNRVLKLNDATAHAEIEAIRK 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L L E ++Y T PC MC AI A I+ +Y+GA++ I + + Sbjct: 62 ASKKLLTYDLSECEIYTTCMPCPMCMGAIRWANIKSVYFGATSQDADDIGFRDKEFYEKD 121 Query: 122 CHHSPEIYPGISEQRSRQIIQ 142 E+ I ++ + Sbjct: 122 F---LEL-KNIQRAECLELFE 138 >gi|256826363|ref|YP_003150323.1| tRNA-adenosine deaminase [Kytococcus sedentarius DSM 20547] gi|256689756|gb|ACV07558.1| tRNA-adenosine deaminase [Kytococcus sedentarius DSM 20547] Length = 159 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 1/146 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 ++ AL + A ++PVGAV + ++I R NR D AHAE++A+R Sbjct: 13 EAWIGHALRAGEQALAAGDVPVGAVVIGPGGQVIGRGWNRREAEGDPLAHAEVVAMRAAA 72 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L + L VTLEPC MCA AI ARI + +GA + K G + + Sbjct: 73 AVRGGWRLEDCALAVTLEPCLMCAGAIGQARIPLVVFGAWDAKAGACGSVWDVLRDSAAL 132 Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ ++ + + DFF RR Sbjct: 133 HRAEVRGGVRQEDCGRTLGDFFVTRR 158 >gi|163745925|ref|ZP_02153284.1| cytidine and deoxycytidylate deaminase family protein [Oceanibulbus indolifex HEL-45] gi|161380670|gb|EDQ05080.1| cytidine and deoxycytidylate deaminase family protein [Oceanibulbus indolifex HEL-45] Length = 145 Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 59/130 (45%), Positives = 85/130 (65%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+PVGAV V +I++ AGN R D TAHAE+LA+R C + E L LYVT Sbjct: 14 RGEVPVGAVVVSPAGQIVAAAGNETRARNDPTAHAEMLALRAACAAVGSERLIGHALYVT 73 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA AI+ AR+ RL+YGA++PK GG+ G + ++ CHH P+++ GI+ + + Sbjct: 74 LEPCAMCAGAIAAARVERLFYGAADPKSGGVAQGARVFSHPQCHHVPQVFDGIAGREAED 133 Query: 140 IIQDFFKERR 149 ++ FF+ +R Sbjct: 134 LLIKFFQAKR 143 >gi|187924315|ref|YP_001895957.1| CMP/dCMP deaminase zinc-binding [Burkholderia phytofirmans PsJN] gi|187715509|gb|ACD16733.1| CMP/dCMP deaminase zinc-binding [Burkholderia phytofirmans PsJN] Length = 171 Score = 155 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 44/122 (36%), Positives = 64/122 (52%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V ++I+ N D +AHAE+ A+R + + LP +LYVTLEPC Sbjct: 17 VPVGAVLVRGEEVIATGFNHPIGGHDPSAHAEMAALRAAAQAVENYRLPGCELYVTLEPC 76 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI ARI R+ +GA +PK G + + +H + G+ E ++ Sbjct: 77 LMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQLNHHTTVIGGVLENECGAALKS 136 Query: 144 FF 145 FF Sbjct: 137 FF 138 >gi|56757936|gb|AAW27108.1| SJCHGC09107 protein [Schistosoma japonicum] Length = 165 Score = 155 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR---MGCR 64 M A E AQ A NE+PVG V ++I+ N +D T HAE++ IR CR Sbjct: 1 MDVAFELAQEALKCNEVPVGCAFVYKGEVIASGRNEVNATRDATQHAEMITIRHLEQWCR 60 Query: 65 IL---SQEILPEVDLYVTLEPCTMCAAAISL---ARIRRLYYGASNPKGGGIENGTQFYT 118 ++L E DLYVT+EPC MC AAI A ++ + YGA N + GG + + Sbjct: 61 KNEIEFDKVLTECDLYVTVEPCIMCTAAIRFCLPAHLKSITYGARNERFGGCGSVLSVHN 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + + PG+ + + ++++ F+ + Sbjct: 121 SPSSVPALNCVPGVEAETAVKLLKRFYAQ 149 >gi|15610888|ref|NP_218269.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis H37Rv] gi|15843372|ref|NP_338409.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium tuberculosis CDC1551] gi|31794922|ref|NP_857415.1| cytidine/deoxycytidylate deaminase [Mycobacterium bovis AF2122/97] gi|121639666|ref|YP_979890.1| putative cytidine/deoxycytidylate deaminase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663618|ref|YP_001285141.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium tuberculosis H37Ra] gi|148824957|ref|YP_001289711.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis F11] gi|167970913|ref|ZP_02553190.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis H37Ra] gi|215405807|ref|ZP_03417988.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis 02_1987] gi|215413680|ref|ZP_03422348.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis 94_M4241A] gi|215424998|ref|ZP_03422917.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T92] gi|215448096|ref|ZP_03434848.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T85] gi|218755535|ref|ZP_03534331.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis GM 1503] gi|219559836|ref|ZP_03538912.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T17] gi|224992162|ref|YP_002646851.1| putative cytidine/deoxycytidylate deaminase [Mycobacterium bovis BCG str. Tokyo 172] gi|253800799|ref|YP_003033800.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN 1435] gi|254366297|ref|ZP_04982341.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis str. Haarlem] gi|254552866|ref|ZP_05143313.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260184675|ref|ZP_05762149.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis CPHL_A] gi|260198800|ref|ZP_05766291.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T46] gi|260202955|ref|ZP_05770446.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis K85] gi|289441188|ref|ZP_06430932.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T46] gi|289445351|ref|ZP_06435095.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis CPHL_A] gi|289556017|ref|ZP_06445227.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN 605] gi|289571998|ref|ZP_06452225.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T17] gi|289572402|ref|ZP_06452629.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis K85] gi|289747592|ref|ZP_06506970.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis 02_1987] gi|289748271|ref|ZP_06507649.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T92] gi|289759914|ref|ZP_06519292.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T85] gi|289763934|ref|ZP_06523312.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis GM 1503] gi|294995336|ref|ZP_06801027.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis 210] gi|297636433|ref|ZP_06954213.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN 4207] gi|297733427|ref|ZP_06962545.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN R506] gi|298527225|ref|ZP_07014634.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis 94_M4241A] gi|306778112|ref|ZP_07416449.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu001] gi|306778644|ref|ZP_07416981.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu002] gi|306786666|ref|ZP_07424988.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu003] gi|306791033|ref|ZP_07429355.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu004] gi|306791352|ref|ZP_07429654.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu005] gi|306795417|ref|ZP_07433719.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu006] gi|306801392|ref|ZP_07438060.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu008] gi|306805598|ref|ZP_07442266.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu007] gi|306969995|ref|ZP_07482656.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu009] gi|306974229|ref|ZP_07486890.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu010] gi|307081937|ref|ZP_07491107.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu011] gi|307086550|ref|ZP_07495663.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu012] gi|313660758|ref|ZP_07817638.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN V2475] gi|2960176|emb|CAA18074.1| POSSIBLE CYTIDINE/DEOXYCYTIDYLATE DEAMINASE [Mycobacterium tuberculosis H37Rv] gi|13883737|gb|AAK48223.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium tuberculosis CDC1551] gi|31620520|emb|CAD95964.1| POSSIBLE CYTIDINE/DEOXYCYTIDYLATE DEAMINASE [Mycobacterium bovis AF2122/97] gi|121495314|emb|CAL73801.1| Possible cytidine/deoxycytidylate deaminase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134151809|gb|EBA43854.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis str. Haarlem] gi|148507770|gb|ABQ75579.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium tuberculosis H37Ra] gi|148723484|gb|ABR08109.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis F11] gi|224775277|dbj|BAH28083.1| putative cytidine/deoxycytidylate deaminase [Mycobacterium bovis BCG str. Tokyo 172] gi|253322302|gb|ACT26905.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN 1435] gi|289414107|gb|EFD11347.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T46] gi|289418309|gb|EFD15510.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis CPHL_A] gi|289440649|gb|EFD23142.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN 605] gi|289536833|gb|EFD41411.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis K85] gi|289545752|gb|EFD49400.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T17] gi|289688120|gb|EFD55608.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis 02_1987] gi|289688858|gb|EFD56287.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T92] gi|289711440|gb|EFD75456.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis GM 1503] gi|289715478|gb|EFD79490.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T85] gi|298497019|gb|EFI32313.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis 94_M4241A] gi|308213634|gb|EFO73033.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu001] gi|308328367|gb|EFP17218.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu002] gi|308328772|gb|EFP17623.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu003] gi|308332614|gb|EFP21465.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu004] gi|308340105|gb|EFP28956.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu005] gi|308344093|gb|EFP32944.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu006] gi|308347895|gb|EFP36746.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu007] gi|308351763|gb|EFP40614.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu008] gi|308352546|gb|EFP41397.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu009] gi|308356497|gb|EFP45348.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu010] gi|308360445|gb|EFP49296.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu011] gi|308364027|gb|EFP52878.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis SUMu012] gi|323717617|gb|EGB26819.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis CDC1551A] gi|326905590|gb|EGE52523.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis W-148] gi|328460526|gb|AEB05949.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN 4207] Length = 152 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 1/118 (0%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTLEPCTMCAAAIS 91 + ++RA N L D TAHAEILA+R+ +L L L VT+EPCTMCA A+ Sbjct: 33 DGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTVEPCTMCAGALV 92 Query: 92 LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 LAR+ RL +GA PK G + + +H PE+ G+ + ++ FF +R Sbjct: 93 LARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAPLEAFFARQR 150 >gi|194015030|ref|ZP_03053647.1| cytidine/deoxycytidylate deaminase family protein [Bacillus pumilus ATCC 7061] gi|194014056|gb|EDW23621.1| cytidine/deoxycytidylate deaminase family protein [Bacillus pumilus ATCC 7061] Length = 156 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 1/115 (0%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ A++ A P GAV V + +II+ N D TAHAE+ AIR Sbjct: 2 NHEDFLQRAIDLAVEGVNSGTGGPFGAVIVKDGQIIAEGSNNVTTTNDPTAHAEVTAIRK 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 C+ L+ L + LY + EPC MC AI AR + +Y+ A + F Sbjct: 62 ACQTLNTYQLEDCILYTSCEPCPMCLGAIYWARPKAVYFAAGHQDAAVSGFDDSF 116 >gi|311030254|ref|ZP_07708344.1| hypothetical protein Bm3-1_06896 [Bacillus sp. m3-13] Length = 158 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 43/116 (37%), Positives = 55/116 (47%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M F+ A++ A N P GAV NN+II+ NR D TAHAE++AIR Sbjct: 3 MHLHEFFLHRAIDLALQNVQENGGPFGAVITKNNQIIAEGVNRVTSNHDPTAHAEVMAIR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 C L L + LY + EPC MC AI ARI +Y+ A I +F Sbjct: 63 KACHSLQTFELRDCILYSSCEPCPMCLGAIYWARIPTVYFAADRKDAASIHFDDEF 118 >gi|163740840|ref|ZP_02148233.1| cytidine and deoxycytidylate deaminase family protein [Phaeobacter gallaeciensis 2.10] gi|161385831|gb|EDQ10207.1| cytidine and deoxycytidylate deaminase family protein [Phaeobacter gallaeciensis 2.10] Length = 147 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 66/129 (51%), Positives = 87/129 (67%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGA + ++++RAGNR RE D TAHAE+L IR C E L DLYVTL Sbjct: 15 GEVPVGAALISPEGQVVARAGNRTRERSDPTAHAEVLVIREACAAAGSERLTGHDLYVTL 74 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCAAAI+ ARIRR+YYGAS+PK GG+ +G ++ HH+PE+Y GIS + + + Sbjct: 75 EPCAMCAAAIAAARIRRVYYGASDPKSGGVAHGACVFSHPQAHHAPEVYEGISAEPAETL 134 Query: 141 IQDFFKERR 149 ++ FF RR Sbjct: 135 LKAFFAARR 143 >gi|218441962|ref|YP_002380291.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424] gi|218174690|gb|ACK73423.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424] Length = 158 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 1/114 (0%) Query: 4 GNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM+ A+ + E P GAV V KII++ N+ D TAHAE++AIR Sbjct: 5 NDQFMAEAIALSFEGMRLGEGGPFGAVIVKEGKIIAKGYNQVISSNDPTAHAEVVAIRHA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 C++L L +LY + EPC MC AI AR+ ++YYG S I F Sbjct: 65 CQVLQNFDLKGCELYTSCEPCPMCLGAIYWARLDKIYYGNSKIDAAKIGFDDNF 118 >gi|322783203|gb|EFZ10789.1| hypothetical protein SINV_01360 [Solenopsis invicta] Length = 175 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 8/147 (5%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M+ AL++A+ + E+PVG + + NN++I+ N E + T HAEI I + Sbjct: 5 AWMNVALQKAEESLRAGEVPVGCLFIYNNEVIATGNNTVNETCNATRHAEINCIDQVLKF 64 Query: 66 LSQEI------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 ++ +D+ VT+EPC MC +A+ ++ + YG +N + GG + + Sbjct: 65 CKEKRVDYETVFRNLDVIVTVEPCIMCMSALLQLQVHSIVYGCANDRFGGCGSVLEV--Q 122 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146 I + + + +++QDF+K Sbjct: 123 KFYDPKIVIQGNVKGEEAMRLLQDFYK 149 >gi|291165661|gb|EFE27710.1| cytidine/deoxycytidylate deaminase family protein [Filifactor alocis ATCC 35896] Length = 150 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 3/146 (2%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + +M A EA + + E+PVGAV V ++ II R N + HAE++AI+ + Sbjct: 2 DCYMEEAFREALYSYQKEEVPVGAVIVKDDVIIGRGHNVIETHQSSVCHAEMIAIQQAQK 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L L +YVTLEPC MC AI +R+ L+ + + G + + Sbjct: 62 HLRNWRLNGAKMYVTLEPCLMCMGAILNSRLSELHIATRDFERGAAVSRVPLILEDKIPN 121 Query: 125 SPEIYPGISEQR-SRQIIQDFFKERR 149 +Y + + +++ FF+E R Sbjct: 122 KLMVY--LYDDETCTYLLKRFFRELR 145 >gi|33865610|ref|NP_897169.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. WH 8102] gi|33632780|emb|CAE07591.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus sp. WH 8102] Length = 157 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 1/140 (0%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M L A E+PV AV + + I NR +D HAE++A+ I Sbjct: 10 WMEVLLARASVNGDSGEVPVAAVILDEQGRCIGHGRNRRERCQDPLGHAELVALSQAATI 69 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L VTLEPC MCA A+ AR+ + +GA++ K GG+ + HH Sbjct: 70 RGDWRFNPCTLLVTLEPCPMCAGALVQARMGTVIFGATDRKRGGLGGCINLADDPSAHHH 129 Query: 126 PEIYPGISEQRSRQIIQDFF 145 + + ++R+ + ++ +F Sbjct: 130 MRVVGPLMQERAAEQLEIWF 149 >gi|86140015|ref|ZP_01058579.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter sp. MED193] gi|85823265|gb|EAQ43476.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter sp. MED193] Length = 148 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 69/131 (52%), Positives = 89/131 (67%), Gaps = 1/131 (0%) Query: 20 LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78 R E+PVGAV V + +I ++AGNR REL D TAHAEIL +R C E L DLYV Sbjct: 18 QRGEVPVGAVLVAPDGRIAAQAGNRTRELSDPTAHAEILVLREACAAGKTERLQGFDLYV 77 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 TLEPC MCAAAI+ AR+RR+YYGAS+PK GG+ +G ++ HH+PEIY GI E + Sbjct: 78 TLEPCAMCAAAIAAARLRRVYYGASDPKSGGVAHGACVFSHPQAHHTPEIYEGIGEVEAA 137 Query: 139 QIIQDFFKERR 149 ++++ FF R Sbjct: 138 ELLRAFFSHLR 148 >gi|157691996|ref|YP_001486458.1| guanine deaminase [Bacillus pumilus SAFR-032] gi|157680754|gb|ABV61898.1| guanine deaminase [Bacillus pumilus SAFR-032] Length = 156 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 1/115 (0%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ A++ A P GAV V + +II+ N D TAHAE+ AIR Sbjct: 2 NHEDFLQRAIDLAVEGVNSGTGGPFGAVIVKDGQIIAEGSNNVTTTNDPTAHAEVTAIRK 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 C+ L+ L + LY + EPC MC AI AR + +Y+ A + F Sbjct: 62 ACQTLNTYQLEDCILYTSCEPCPMCLGAIYWARPKAVYFAAGHQDAAVSGFDDSF 116 >gi|328872297|gb|EGG20664.1| adenosine deaminase [Dictyostelium fasciculatum] Length = 307 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 50/193 (25%), Positives = 79/193 (40%), Gaps = 48/193 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 ++K + +M A+E+ A E+PVG V V N +I+R N+ K+ T HAEI A+ Sbjct: 68 IEKHSKYMRLAIEQGYIALNEGEVPVGCVIVHRNGTVIARGFNKTNIKKNATRHAEIEAL 127 Query: 60 R---------------------------------------------MGCRILSQEILPEV 74 G I S+++L E Sbjct: 128 DSIYLDNVNNYNNNNNNNNNNNNNNNNNNNNNNNNNNNGHHQHVDLNGIDIHSEDLLSEC 187 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA--TCHHSPEIYPGI 132 LYVT+EPC MCAA + L++I +Y+G N K GG + + H G+ Sbjct: 188 TLYVTVEPCIMCAAILQLSKIGMVYFGCYNDKFGGNGSILPIHNATCVENGHPYNCVSGL 247 Query: 133 SEQRSRQIIQDFF 145 + + ++Q F+ Sbjct: 248 LKDEAVYLLQKFY 260 >gi|310819974|ref|YP_003952332.1| cytidine and deoxycytidylate deaminase zinc-binding domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309393046|gb|ADO70505.1| Cytidine and deoxycytidylate deaminase zinc-binding domain protein [Stigmatella aurantiaca DW4/3-1] Length = 154 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 74/147 (50%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL A+ A E+PVGAVAV ++I NR + AHAE+LA+ Sbjct: 2 SDEAFMQQALALAREAEALGEVPVGAVAVHQGQVIGTGFNRREIDRHPFAHAELLALDAA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L L V LYVTLEPC MCA A+ R+ RL +G +PK G + Sbjct: 62 ARSLGVWRLTGVTLYVTLEPCAMCAGAMVQGRVTRLVFGTLDPKAGAAGSLYNLVEEPRH 121 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 +H ++ GI SRQ+++ FF+ R Sbjct: 122 NHRLQVTSGILADESRQLLKGFFERLR 148 >gi|114798136|ref|YP_761455.1| cytidine/deoxycytidylate deaminase family protein [Hyphomonas neptunium ATCC 15444] gi|114738310|gb|ABI76435.1| cytidine/deoxycytidylate deaminase family protein [Hyphomonas neptunium ATCC 15444] Length = 146 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 63/145 (43%), Positives = 87/145 (60%), Gaps = 3/145 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ A+E A+ AA E+PVGAV V +I+ NR D +AHAEI+AIR + Sbjct: 1 MARAMELAREAAKAGEVPVGAVVVDPETGEIVGEGYNRPVGTHDPSAHAEIIAIRAAAQK 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L +DL+VTLEPC MCA AIS ARI RL + A++ KGG + +G +F+ TCH Sbjct: 61 LGNYRLTGLDLHVTLEPCAMCAGAISFARIGRLVFAAADIKGGAVMSGPRFFEQPTCHWR 120 Query: 126 PEIYPG-ISEQRSRQIIQDFFKERR 149 PE + E + +++DFF+ RR Sbjct: 121 PEWRQDALHEAEAADLLRDFFRTRR 145 >gi|317476774|ref|ZP_07936017.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides eggerthii 1_2_48FAA] gi|316906949|gb|EFV28660.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides eggerthii 1_2_48FAA] Length = 187 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 55/118 (46%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M A++ + P GAV V + ++I+ NR D TAHAE+ AIR Sbjct: 33 DEDARYMRMAIDLSVENIDNGGGPFGAVIVRDGEVIATGVNRVVPNNDPTAHAEVNAIRN 92 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 C+ L L +Y + EPC MC +A+ A ++R+ YG + I+ F Sbjct: 93 ACQKLDTFQLEGCTVYSSCEPCPMCLSALYWAGVKRICYGNTKADAKAIDFDDSFIYD 150 >gi|194900476|ref|XP_001979783.1| GG22115 [Drosophila erecta] gi|190651486|gb|EDV48741.1| GG22115 [Drosophila erecta] Length = 160 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 9/147 (6%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL EA+ A E+PVG V V K+++R GN ++ T HAE + I Sbjct: 3 AFMEEALVEARRARDAGEVPVGCVFVHGGKVVARGGNEVNVHRNATRHAEFICIDAILAS 62 Query: 66 LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + LP E+ + VT+EPC MC+AA+ ++ + YG N + GG T Sbjct: 63 CRERRLPARQLFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVA 119 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146 A EI G+ + +++DF+K Sbjct: 120 AVVGQRIEITGGVRADEAMALLKDFYK 146 >gi|325289744|ref|YP_004265925.1| Guanine deaminase [Syntrophobotulus glycolicus DSM 8271] gi|324965145|gb|ADY55924.1| Guanine deaminase [Syntrophobotulus glycolicus DSM 8271] Length = 154 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 50/150 (33%), Positives = 71/150 (47%), Gaps = 10/150 (6%) Query: 5 NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 N+FM A EA+ E P GAV V K+I+ A N +D TAHAEI+AIR Sbjct: 2 NLFMQQAYREAKTGMTAGEGGPFGAVVVREGKVIASAHNIVLLTQDSTAHAEIVAIRKAE 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R+L L +LY T PC MC AI ARI ++YYG + + I + + A Sbjct: 62 RLLGTHDLSGCELYTTSYPCPMCLGAIMWARISKVYYGCTPEQVSKIGFDDKVFYEAIED 121 Query: 124 HSPEIYPGI--SEQ----RSRQIIQDFFKE 147 + G+ E +++ D+ K+ Sbjct: 122 PNA---SGLISLEHSDSGECLKLLADWIKK 148 >gi|20092219|ref|NP_618294.1| cytidine/deoxycytidylate deaminase family protein [Methanosarcina acetivorans C2A] gi|19917452|gb|AAM06774.1| cytidine/deoxycytidylate deaminase family protein [Methanosarcina acetivorans C2A] Length = 162 Score = 154 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 3/146 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +K +FM A+E + + + P GAV N KIIS + N+ L D TAHAEI AIR Sbjct: 8 EKDTLFMRRAIELSLESVKKGGGPFGAVITKNGKIISESCNQVTVLNDPTAHAEISAIRE 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-- 119 R L+ L ++Y + EPC MC AI ARI R+++ + I F Sbjct: 68 AARKLNAPDLKGCEIYASCEPCPMCLGAIYWARIDRVFFANTREDADNIGFDDSFIYEEI 127 Query: 120 -ATCHHSPEIYPGISEQRSRQIIQDF 144 + + + + + + +++ Sbjct: 128 PRSLRERSIEFRQLLREEALEAFREW 153 >gi|254233244|ref|ZP_04926570.1| hypothetical protein TBCG_03677 [Mycobacterium tuberculosis C] gi|124603037|gb|EAY61312.1| hypothetical protein TBCG_03677 [Mycobacterium tuberculosis C] Length = 152 Score = 154 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 1/118 (0%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTLEPCTMCAAAIS 91 + ++RA N L D TAHAEILA+R+ +L L L VT+EPCTMCA A+ Sbjct: 33 DGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTVEPCTMCAGALV 92 Query: 92 LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +AR+ RL +GA PK G + + +H PE+ G+ + ++ FF +R Sbjct: 93 MARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAPLEAFFARQR 150 >gi|86143339|ref|ZP_01061741.1| guanine deaminase [Leeuwenhoekiella blandensis MED217] gi|85830244|gb|EAQ48704.1| guanine deaminase [Leeuwenhoekiella blandensis MED217] Length = 156 Score = 154 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 41/115 (35%), Positives = 53/115 (46%), Gaps = 1/115 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A+ A NE P G V V + KII + N+ D TAHAE+ AIR Sbjct: 2 DHKHYMQEAVTAALKGMQNNEGGPFGCVIVKDGKIIGKGNNKVTSTNDPTAHAEVTAIRD 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 C+ L L LY + EPC MC AI AR ++YYG++ I F Sbjct: 62 ACKNLGSFQLEGCILYTSCEPCPMCLGAIYWARPEKVYYGSTKTDAAHIGFDDDF 116 >gi|52079816|ref|YP_078607.1| guanine deaminase [Bacillus licheniformis ATCC 14580] gi|52785186|ref|YP_091015.1| GuaD [Bacillus licheniformis ATCC 14580] gi|319646374|ref|ZP_08000604.1| GuaD protein [Bacillus sp. BT1B_CT2] gi|52003027|gb|AAU22969.1| guanine deaminase [Bacillus licheniformis ATCC 14580] gi|52347688|gb|AAU40322.1| GuaD [Bacillus licheniformis ATCC 14580] gi|317392124|gb|EFV72921.1| GuaD protein [Bacillus sp. BT1B_CT2] Length = 156 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 1/115 (0%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ A++ A + P GAV V + +II+ N D TAHAE+ AIR+ Sbjct: 2 NHEAFLQRAIDLAVESVKSGTGGPFGAVIVKDGQIIAEGKNNVTTSNDPTAHAEVTAIRL 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 C L L + LY + EPC MC AI AR + +Y+ A + F Sbjct: 62 ACEALGDYQLNDCILYTSCEPCPMCLGAIYWARPKEVYFAAQHSDAASAGFDDSF 116 >gi|125975000|ref|YP_001038910.1| guanine deaminase [Clostridium thermocellum ATCC 27405] gi|256005114|ref|ZP_05430084.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum DSM 2360] gi|281418582|ref|ZP_06249601.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum JW20] gi|125715225|gb|ABN53717.1| Guanine deaminase [Clostridium thermocellum ATCC 27405] gi|255990965|gb|EEU01077.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum DSM 2360] gi|281407666|gb|EFB37925.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum JW20] gi|316939161|gb|ADU73195.1| CMP/dCMP deaminase zinc-binding protein [Clostridium thermocellum DSM 1313] Length = 154 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 9/128 (7%) Query: 5 NVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + FM A++EA + +N P GAV V +N+II+RA N + D T HAE++AIR Sbjct: 2 DDFMKEAVKEAVSGMRQNHGGPFGAVIVKDNEIIARAHNEVIKNNDPTDHAEMIAIRKAA 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + LS+ L + +LY + EPC MC AAI A+I+++YYG + I + Sbjct: 62 KKLSRFDLGDCELYSSCEPCPMCFAAIHWAKIKKVYYGCTREDAAKIGFDDNYI------ 115 Query: 124 HSPEIYPG 131 E+ G Sbjct: 116 --YEVIKG 121 >gi|294084707|ref|YP_003551465.1| CMP/dCMP deaminase, zinc-binding protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664280|gb|ADE39381.1| CMP/dCMP deaminase, zinc-binding protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 149 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 50/127 (39%), Positives = 75/127 (59%), Gaps = 1/127 (0%) Query: 24 IPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 +PV A V + +++ NR + HAEILAI L DL+VTLEP Sbjct: 23 VPVAAAIVAPDGTVVALESNRMVRDGNALHHAEILAINAALAKTGGSRLDGYDLWVTLEP 82 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MCA AI+ AR+RR+Y+ A + K G +E+G +++ +C+H PE+Y G+SEQ + ++ Sbjct: 83 CAMCAGAIAHARLRRVYFAAYDAKAGAVESGIRYFDHPSCNHRPEVYGGLSEQAASIMLS 142 Query: 143 DFFKERR 149 DFF +R Sbjct: 143 DFFAAKR 149 >gi|262341257|ref|YP_003284112.1| cytidine/deoxycytidylate deaminase family protein [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272594|gb|ACY40502.1| cytidine/deoxycytidylate deaminase family protein [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 148 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 50/142 (35%), Positives = 76/142 (53%), Gaps = 5/142 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+EA A +NE+P+GA + +I++A N ++TAHAE+L I + L Sbjct: 1 MKIALKEAFIAFHKNEVPIGAAITYEDVVIAKAHNLTETFSNITAHAEMLVINLASNYLR 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + + + LYVTLEPC MCA A+ L++I R+ GA N G Y+ H + Sbjct: 61 NKYIKKCTLYVTLEPCIMCAGALFLSQIGRVVCGAPNNSIRGFS-----YSGIKLHPKTK 115 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 GI + + + +IQ FF +R Sbjct: 116 FVSGIMKNQCKALIQKFFFFKR 137 >gi|218130011|ref|ZP_03458815.1| hypothetical protein BACEGG_01594 [Bacteroides eggerthii DSM 20697] gi|217987814|gb|EEC54140.1| hypothetical protein BACEGG_01594 [Bacteroides eggerthii DSM 20697] Length = 207 Score = 153 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 55/118 (46%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M A++ + P GAV V + ++I+ NR D TAHAE+ AIR Sbjct: 53 DEDARYMRMAIDLSVENIDNGGGPFGAVIVRDGEVIATGVNRVVPNNDPTAHAEVNAIRN 112 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 C+ L L +Y + EPC MC +A+ A ++R+ YG + I+ F Sbjct: 113 ACQKLDTFQLEGCTVYSSCEPCPMCLSALYWAGVKRICYGNTKADAKAIDFDDSFIYD 170 >gi|261416951|ref|YP_003250634.1| CMP/dCMP deaminase zinc-binding protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373407|gb|ACX76152.1| CMP/dCMP deaminase zinc-binding protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327524|gb|ADL26725.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 164 Score = 153 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 56/118 (47%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A++ + + P GAV V + ++++ NR D TAHAE+ AIR Sbjct: 10 DEDKRFMQMAIQLSVDNVDNGGGPFGAVIVKDGEVVATGANRVVPNNDPTAHAEVTAIRN 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 C L +L +Y + EPC MC +A+ AR++R+ Y + IE F Sbjct: 70 ACAKLGTFMLDGCTVYTSCEPCPMCLSALYWARVKRICYANTKVDAAAIEFDDSFIYD 127 >gi|282859465|ref|ZP_06268570.1| guanine deaminase [Prevotella bivia JCVIHMP010] gi|282587693|gb|EFB92893.1| guanine deaminase [Prevotella bivia JCVIHMP010] Length = 168 Score = 153 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 6/143 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K + M A+E + N+ P GAV N +I++ N+ D TAHAE+ IR Sbjct: 14 MTKEEL-MRRAIELSINSVRNGGGPFGAVIARNGEIVAEGSNKVTIDNDPTAHAEVSTIR 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 M C+ L L ++Y + EPC MC AI A + ++YY I F Sbjct: 73 MACKKLDSFDLSGCEIYTSCEPCPMCLGAIYWAHLDKIYYANDRKDAANIGFDDDFIYQE 132 Query: 121 TCHHSPEIYPGISEQRSRQIIQD 143 E+ P ++ S ++Q Sbjct: 133 -----IEVQPQYRKKPSEILLQS 150 >gi|182416349|ref|YP_001821415.1| CMP/dCMP deaminase zinc-binding [Opitutus terrae PB90-1] gi|177843563|gb|ACB77815.1| CMP/dCMP deaminase zinc-binding [Opitutus terrae PB90-1] Length = 183 Score = 153 bits (388), Expect = 7e-36, Method: Composition-based stats. Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 1/113 (0%) Query: 5 NVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A++ A + + P G V V +I++R NR D TAHAE+ AIR Sbjct: 31 ETYMREAIQLADDGMRADRGGPFGCVIVRRGEIVARGQNRVTSTNDPTAHAEVTAIREAA 90 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + L L + +LY + EPC MC +AI ARI +YY + I F Sbjct: 91 QRLGTFQLGDCELYTSCEPCPMCLSAIYWARIPTVYYANTRKDAAAIGFDDDF 143 >gi|189218057|ref|YP_001938699.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4] gi|189184915|gb|ACD82100.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4] Length = 168 Score = 153 bits (388), Expect = 7e-36, Method: Composition-based stats. Identities = 46/148 (31%), Positives = 67/148 (45%), Gaps = 6/148 (4%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +K N ++ AL+ AQ + + E P GAV VL + I A N D TAHAEILAI+ Sbjct: 13 EKHNYWLRLALKLAQYGSEQGEGGPFGAVVVLQEEAIGLAHNEVLSRLDPTAHAEILAIQ 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL- 119 + +S L +Y + EPC MC +AI A I ++YY GI F Sbjct: 73 RAAKKISHFDLEGSIIYTSCEPCPMCLSAIYWAGISKVYYACGKEDVQGIGFRDAFLYEE 132 Query: 120 ---ATCHHSPEIYPGISEQRSRQIIQDF 144 C + + + I+Q++ Sbjct: 133 LGKPVCQRKIQAIQ-LLREEGIAILQNW 159 >gi|313203297|ref|YP_004041954.1| cmp/dcmp deaminase zinc-binding protein [Paludibacter propionicigenes WB4] gi|312442613|gb|ADQ78969.1| CMP/dCMP deaminase zinc-binding protein [Paludibacter propionicigenes WB4] Length = 156 Score = 153 bits (388), Expect = 7e-36, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 50/120 (41%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM A+ + P AV V KII+ NR D TAHAE+ AIR Sbjct: 1 MDSNKKFMRKAIALSLKNIENGGGPFAAVIVKEGKIIATGANRVTANTDPTAHAEVNAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L L ++Y + EPC MC A+ A + ++YYG + I F Sbjct: 61 KAAKKLGTFDLSGCEIYTSCEPCPMCLGAVYWAHLDKMYYGNTKADAKNIGFDDSFIYDE 120 >gi|215422331|ref|NP_001135855.1| adenosine deaminase, tRNA-specific 2, TAD2 homolog [Nasonia vitripennis] Length = 169 Score = 153 bits (388), Expect = 8e-36, Method: Composition-based stats. Identities = 43/146 (29%), Positives = 77/146 (52%), Gaps = 8/146 (5%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR------ 60 +M ALE+A+ + + E+PVG + + NKII+ N E ++ T HAE+ I Sbjct: 6 WMDKALEKAEESLKKGEVPVGCLFLYENKIIATGSNTVNETRNATRHAELNCIDDVLVFC 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +E+ +D+ VT+EPC MCAAA+ +IR + YG +N + GG ++ + + Sbjct: 66 QKNNYNYKEVFKNIDVVVTVEPCIMCAAALHQLQIRSIIYGCANDRFGGCKSVYEVSKVY 125 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 + + + + Q+++DF+K Sbjct: 126 ES--KINVVGNVKGEEAMQLLKDFYK 149 >gi|302383496|ref|YP_003819319.1| CMP/dCMP deaminase zinc-binding protein [Brevundimonas subvibrioides ATCC 15264] gi|302194124|gb|ADL01696.1| CMP/dCMP deaminase zinc-binding protein [Brevundimonas subvibrioides ATCC 15264] Length = 150 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 54/130 (41%), Positives = 71/130 (54%), Gaps = 2/130 (1%) Query: 22 NEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 E+PVGAV V +++ N D TAHAEI AIR L + LYVT Sbjct: 15 GEVPVGAVIVDETTGTVVATGANAPISGHDPTAHAEIQAIRAAAAATGNYRLTGLTLYVT 74 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA AIS ARI R+ +GA +PKGG + +G + + T H P I G+ S + Sbjct: 75 LEPCAMCAGAISHARIGRVVWGADDPKGGAVIHGPRLFDQPTLHSRPVIEGGVLADASAE 134 Query: 140 IIQDFFKERR 149 ++ FF+ RR Sbjct: 135 SLRAFFRARR 144 >gi|327261885|ref|XP_003215757.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Anolis carolinensis] Length = 160 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 8/141 (5%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ------ 68 A+ A E+PVG + V NN++I + N E K+ T HAE++AI + Sbjct: 3 AKEALENGEVPVGCLMVYNNEVIGKGKNEVNETKNATRHAEMVAIDQAIDWCHKQKKRME 62 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL--ATCHHSP 126 E+ LYVT+EPC MCAAA+ + +I + YG N + GG + + Sbjct: 63 EVFLHTVLYVTVEPCIMCAAALRMMKIPLVVYGCQNERFGGCGSVLNISSDTLTDTGEPF 122 Query: 127 EIYPGISEQRSRQIIQDFFKE 147 + G + + ++++ F+++ Sbjct: 123 QCIAGYRSEEAVEMLKIFYRQ 143 >gi|303242511|ref|ZP_07328990.1| CMP/dCMP deaminase zinc-binding [Acetivibrio cellulolyticus CD2] gi|302589929|gb|EFL59698.1| CMP/dCMP deaminase zinc-binding [Acetivibrio cellulolyticus CD2] Length = 157 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 1/120 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M+K + FM A +EA P GAV V +N II+RA N + D T HAE++AI Sbjct: 1 MRKNSDFMKVAAQEAVEGVKSGHGGPFGAVIVKDNMIIARAHNEVIKNNDPTDHAEMIAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R ++L + L + +LY + EPC MC +AI A+I +++YG + I ++ Sbjct: 61 RSAAKMLERFDLSDCELYTSCEPCPMCFSAIHWAKIEKVFYGCTREDAASIGFDDKYIYD 120 >gi|332876785|ref|ZP_08444543.1| guanine deaminase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685344|gb|EGJ58183.1| guanine deaminase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 155 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 5/137 (3%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E + P GAV V ++I++ NR D TAHAE+ AIR CR L Sbjct: 6 FMRKAIELSVENVKNGGGPFGAVIVKGDEIVATGVNRVTAHNDPTAHAEVSAIREACRRL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF----YTLATC 122 L ++Y + EPC MC AI A + ++YYG + I F L Sbjct: 66 GTFDLSGCEIYTSCEPCPMCLGAIYWAHLDKIYYGNNKDDAADIGFDDSFIYEELALPRQ 125 Query: 123 HHSPEIYPGISEQRSRQ 139 + + + + + Sbjct: 126 NRKKAMEE-LLPEEAIA 141 >gi|329948029|ref|ZP_08294930.1| cytidine and deoxycytidylate deaminase zinc-binding region [Actinomyces sp. oral taxon 170 str. F0386] gi|328523168|gb|EGF50269.1| cytidine and deoxycytidylate deaminase zinc-binding region [Actinomyces sp. oral taxon 170 str. F0386] Length = 143 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 50/132 (37%), Positives = 66/132 (50%), Gaps = 1/132 (0%) Query: 19 ALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLY 77 E+PVGAV + +++ A N D TAHAEI A+R L L L Sbjct: 12 GESGEVPVGAVVLSPEGTVLAEAANAREAQHDPTAHAEIRALRAAGAALGDSHLDGCTLV 71 Query: 78 VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 VTLEPCTMCA AI LAR+ RL GA P+ G + A +H E+ G+ + S Sbjct: 72 VTLEPCTMCAGAIVLARVARLVLGAWEPRTGACGSVRDVVRDARANHQVEVRAGLRARES 131 Query: 138 RQIIQDFFKERR 149 + ++ FF RR Sbjct: 132 QDLLTAFFSGRR 143 >gi|212693618|ref|ZP_03301746.1| hypothetical protein BACDOR_03136 [Bacteroides dorei DSM 17855] gi|237724217|ref|ZP_04554698.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. D4] gi|212663871|gb|EEB24445.1| hypothetical protein BACDOR_03136 [Bacteroides dorei DSM 17855] gi|229437405|gb|EEO47482.1| cytidine/deoxycytidylate deaminase [Bacteroides dorei 5_1_36/D4] Length = 187 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 44/150 (29%), Positives = 64/150 (42%), Gaps = 10/150 (6%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKK + M A+E + P GAV + +II+ NR D TAHAE+ AIR Sbjct: 33 MKKEEL-MRKAIELSIENVANGGGPFGAVIAKDGEIIATGVNRVTSQCDPTAHAEVSAIR 91 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTL 119 L L ++Y + EPC MC AI AR+ ++YY + I F Y Sbjct: 92 AAATKLGTFNLSGCEIYTSCEPCPMCLGAIYWARLDKMYYANNKTDAKNIGFDDSFIYDE 151 Query: 120 ATCHHSP-----EIYPGISEQRSRQIIQDF 144 + S EI + + + + Q + Sbjct: 152 LSLKPSARKLPSEI---LLAEEAIKAFQQW 178 >gi|330995719|ref|ZP_08319617.1| guanine deaminase [Paraprevotella xylaniphila YIT 11841] gi|329574778|gb|EGG56339.1| guanine deaminase [Paraprevotella xylaniphila YIT 11841] Length = 155 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 39/111 (35%), Positives = 53/111 (47%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A+E + P GAV V ++I++ NR D TAHAE+ AIR CR Sbjct: 5 KFMRKAIELSVENVKNGGGPFGAVIVKGDEIVATGVNRVTAHNDPTAHAEVSAIREACRR 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L L ++Y + EPC MC AI A + ++YYG + I F Sbjct: 65 LGTFDLSGCEIYTSCEPCPMCLGAIYWAHLDKIYYGNNKDDAADIGFDDSF 115 >gi|303237160|ref|ZP_07323730.1| guanine deaminase [Prevotella disiens FB035-09AN] gi|302482547|gb|EFL45572.1| guanine deaminase [Prevotella disiens FB035-09AN] Length = 155 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 42/141 (29%), Positives = 59/141 (41%), Gaps = 5/141 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 M A+E ++N+ P GAV + +II+ NR D TAHAE+ IR Sbjct: 2 TNEELMRRAIELSENSVRNGGGPFGAVIAKDGEIIAEGSNRVTIDNDPTAHAEVCTIRKA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C L L +Y + EPC MC AI A + ++YY G I F Sbjct: 62 CEKLGTFDLKGCVIYTSCEPCPMCFGAIYWAHLEKIYYANDRKDAGKIGFDDDFIYEE-- 119 Query: 123 HHSPEIYPGISEQRSRQIIQD 143 I P ++ S I+Q+ Sbjct: 120 ---IAIEPQYRKKPSEIILQN 137 >gi|326385119|ref|ZP_08206788.1| cytidine/deoxycytidylate deaminase family protein [Gordonia neofelifaecis NRRL B-59395] gi|326196152|gb|EGD53357.1| cytidine/deoxycytidylate deaminase family protein [Gordonia neofelifaecis NRRL B-59395] Length = 154 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 49/128 (38%), Positives = 68/128 (53%), Gaps = 2/128 (1%) Query: 24 IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTLE 81 +P+GAV + + ++RA NR D TAHAEILA+R L + L VT+E Sbjct: 24 VPIGAVVFGPDGRELARAANRREADADPTAHAEILALRAAAARHGDGWRLSDCTLAVTVE 83 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PCTMCA AI LARI R+ +GA PK G + + + PE+ G+ E ++ Sbjct: 84 PCTMCAGAIGLARISRVVFGAWEPKTGAVGSLWDVLRDPRQMYRPEVLAGVREDECAALV 143 Query: 142 QDFFKERR 149 +DFF R Sbjct: 144 RDFFAAHR 151 >gi|88803350|ref|ZP_01118876.1| guanine deaminase [Polaribacter irgensii 23-P] gi|88780916|gb|EAR12095.1| guanine deaminase [Polaribacter irgensii 23-P] Length = 157 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 1/117 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 MK+ FMS A++ A NE P G + V + II N+ D TAHAE+ AI Sbjct: 1 MKQHEEFMSAAVKAALKGMNNNEGGPFGCIIVKDGAIIGSGNNKVTSTNDPTAHAEVTAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 R C+ + L +Y + EPC MC AI AR ++YYG++ I F Sbjct: 61 RDACKNIGSFQLDGCIIYTSCEPCPMCLGAIYWARPDKVYYGSNQQDAANIGFDDAF 117 >gi|259415788|ref|ZP_05739708.1| cytidine and deoxycytidylate deaminase family protein [Silicibacter sp. TrichCH4B] gi|259347227|gb|EEW59004.1| cytidine and deoxycytidylate deaminase family protein [Silicibacter sp. TrichCH4B] Length = 150 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 71/130 (54%), Positives = 91/130 (70%), Gaps = 1/130 (0%) Query: 21 RNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+PVGAV V ++++RAGNR REL D TAHAE+L IR GC +L E L DLYVT Sbjct: 20 RGEVPVGAVLVNPSGEVVARAGNRTRELNDPTAHAEVLVIRAGCAVLGSERLTGHDLYVT 79 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCAAAI+ AR+ R+YYGAS+PK GG+ +G + HH PE+Y G S +S Sbjct: 80 LEPCAMCAAAIAAARVARVYYGASDPKSGGVAHGACVFDHPQAHHVPEVYDGFSASQSEA 139 Query: 140 IIQDFFKERR 149 +++DFF +RR Sbjct: 140 LLKDFFAKRR 149 >gi|195501916|ref|XP_002098000.1| GE10118 [Drosophila yakuba] gi|194184101|gb|EDW97712.1| GE10118 [Drosophila yakuba] Length = 160 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 9/147 (6%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL EA+ A E+PVG V V K+++R GN ++ T HAE + I Sbjct: 3 AFMEEALVEARRARDAGEVPVGCVFVHGGKVVARGGNEVNVHRNATRHAEFICIDAILAS 62 Query: 66 LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + LP E+ + VT+EPC MC+AA+ ++ + YG N + GG T Sbjct: 63 CRERRLPARQLFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVA 119 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146 A +I G+ + ++++F+K Sbjct: 120 AVVGQRIQITGGVRADEAMALLKEFYK 146 >gi|160938326|ref|ZP_02085681.1| hypothetical protein CLOBOL_03223 [Clostridium bolteae ATCC BAA-613] gi|158438699|gb|EDP16456.1| hypothetical protein CLOBOL_03223 [Clostridium bolteae ATCC BAA-613] Length = 155 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 44/155 (28%), Positives = 63/155 (40%), Gaps = 12/155 (7%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M +FM A+ +Q A P GAV V + +II N+ D T HAE +R Sbjct: 1 MMNDEIFMKEAIRLSQLAVSHGNEPFGAVLVKDGEIIFSNENQIYTGSDPTFHAEAGLLR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN--------PKGGGIEN 112 C L E LY + EPC MC A+ ++ RL YGAS+ KG Sbjct: 61 RFCAETHITDLREYTLYSSCEPCFMCCGAMVWTKLGRLVYGASDIDLCSILHEKGAECCK 120 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 P++ G+ S +I+ +F + Sbjct: 121 IV----FEHSPWKPQVTSGVLRDESLKILTAYFSK 151 >gi|304383618|ref|ZP_07366077.1| guanine deaminase [Prevotella marshii DSM 16973] gi|304335142|gb|EFM01413.1| guanine deaminase [Prevotella marshii DSM 16973] Length = 155 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 1/120 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKK + M A+ ++ + P GAV + +II+ N + D TAHAE+ AIR Sbjct: 1 MKKEEL-MRKAIALSEESVKNGGGPFGAVIAKDGEIIAEGANSVTKDHDPTAHAEVNAIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R L L ++Y + EPC MC AI A + ++YY I F L Sbjct: 60 KASRKLGTFDLSGCEIYTSCEPCPMCLGAIYWAHLDKIYYANDRKDAARIGFDDDFIYLE 119 >gi|332028253|gb|EGI68300.1| tRNA-specific adenosine deaminase 2 [Acromyrmex echinatior] Length = 175 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 8/150 (5%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL++A+ + E+PVG + + NN+II+ N E + T HAEI I Sbjct: 2 DTSAWMDVALQKAEESLKAGEVPVGCLFIYNNQIIATGNNTVNETCNATRHAEINCIDQV 61 Query: 63 CRILSQE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + ++ + +D+ VT+EPC MC +A+ +I + YG +N + GG + + Sbjct: 62 LKFCKEKSMDYEMVFRNLDVIVTVEPCIMCMSALLQLQIHSIVYGCANDRFGGCISVLEV 121 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 I + + + +++QDF+K Sbjct: 122 PKFYDS--KIIIQGNVKGEEAMRLLQDFYK 149 >gi|268575234|ref|XP_002642596.1| Hypothetical protein CBG09150 [Caenorhabditis briggsae] gi|187032061|emb|CAP28830.1| hypothetical protein CBG_09150 [Caenorhabditis briggsae AF16] Length = 153 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 1/110 (0%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A+EEA+ + + P GAV V + K+I N KD TAHAE+ AIR C+ Sbjct: 3 FMKLAIEEAKKGMVAGDGGPFGAVIVKDGKVIGSGHNMVLVTKDPTAHAEVTAIRNTCKN 62 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + L LY + PC MC A +R+ +YYGA++ + I G Sbjct: 63 VDSFDLSGCQLYTSCYPCPMCMGAALWSRVDAIYYGATSSEAAEIGFGDH 112 >gi|170782870|ref|YP_001711204.1| tRNA-specific adenosine deaminase [Clavibacter michiganensis subsp. sepedonicus] gi|169157440|emb|CAQ02629.1| tRNA-specific adenosine deaminase [Clavibacter michiganensis subsp. sepedonicus] Length = 158 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 39/113 (34%), Positives = 53/113 (46%) Query: 37 ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96 I R N +D TAHAE+ A+R L L VTLEPC MCA AI AR+ Sbjct: 43 IGRGRNLREARQDPTAHAEVEALRAAAEATGDRHLVGATLVVTLEPCVMCAGAILAARVP 102 Query: 97 RLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 R+ +GA + K G + H E++ G+ ++ DFF +RR Sbjct: 103 RVVFGAWDEKAGAAGSLYDVLRDRRLPHRAEVFAGVLAAECAAVLDDFFADRR 155 >gi|300727400|ref|ZP_07060809.1| cytidine/deoxycytidylate deaminase family protein [Prevotella bryantii B14] gi|299775280|gb|EFI71879.1| cytidine/deoxycytidylate deaminase family protein [Prevotella bryantii B14] Length = 155 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 1/116 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+K + FM A+ ++N+ P GAV V + +I++ A N D TAHAEI IR Sbjct: 1 MEKKD-FMRRAIALSENSVKTGGGPFGAVIVKDGEIVAEASNSVTIDNDPTAHAEINCIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 +IL L D+Y + EPC MC AI A + +YY I F Sbjct: 60 KATKILKSFDLAGCDIYTSCEPCPMCLGAIYWAHLDHIYYANDRKDAAKIGFDDDF 115 >gi|328950667|ref|YP_004368002.1| tRNA(Ile)-lysidine synthase [Marinithermus hydrothermalis DSM 14884] gi|328450991|gb|AEB11892.1| tRNA(Ile)-lysidine synthase [Marinithermus hydrothermalis DSM 14884] Length = 528 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 79/147 (53%), Gaps = 7/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M AL A+ AA + E+P+GAV V + +++ A N +D TAHAE+LA+R Sbjct: 383 DEDRYMRRALVLARAAARQGEVPIGAVLVRDGAVLAEAANAVEASRDATAHAELLALRTA 442 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R + +++LP LYVTLEPC MC AI AR+ R+ YG N K G +T+ Sbjct: 443 LRRVGEKVLPGATLYVTLEPCPMCYGAILEARVARVVYGVENLKAGA-------FTVHGL 495 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149 + G E ++++DFF R Sbjct: 496 EPRVALEAGRVEGECAKVLKDFFARLR 522 >gi|150004479|ref|YP_001299223.1| cytidine/deoxycytidylate deaminase [Bacteroides vulgatus ATCC 8482] gi|254882789|ref|ZP_05255499.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 4_3_47FAA] gi|294778238|ref|ZP_06743664.1| guanine deaminase [Bacteroides vulgatus PC510] gi|319643895|ref|ZP_07998478.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_1_40A] gi|149932903|gb|ABR39601.1| cytidine/deoxycytidylate deaminase [Bacteroides vulgatus ATCC 8482] gi|254835582|gb|EET15891.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 4_3_47FAA] gi|294447866|gb|EFG16440.1| guanine deaminase [Bacteroides vulgatus PC510] gi|317384512|gb|EFV65478.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_1_40A] Length = 155 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 10/150 (6%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKK + M A+E + P GAV + +II+ NR D TAHAE+ AIR Sbjct: 1 MKKEEL-MRKAIELSIENVANGGGPFGAVIAKDGEIIATGANRVTSQCDPTAHAEVSAIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTL 119 L L ++Y + EPC MC AI AR+ ++YY + I F Y Sbjct: 60 AAASKLGTFNLSGCEIYTSCEPCPMCLGAIYWARLDKMYYANNKTDAKNIGFDDSFIYDE 119 Query: 120 ATCHHSP-----EIYPGISEQRSRQIIQDF 144 + S E+ + + + + Q + Sbjct: 120 LSLKPSARKLPSEV---LLAEEAIKAFQQW 146 >gi|145345338|ref|XP_001417171.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577398|gb|ABO95464.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 170 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 16/158 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A +A + E+P+ AV V ++++ A NR D TAHAE+L IR+G Sbjct: 1 MRRALALALDAGSQGEVPIAAVLVDATTGEVVAEAANRCERDGDPTAHAEMLLIRLGAEK 60 Query: 66 LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA---- 120 L L +YVTLEPC MCA AI +R+ + YGA N G + Sbjct: 61 LGGWRHLKRTRMYVTLEPCAMCAGAILQSRVGGVTYGARNALLGADGSWAALLRNEDVGG 120 Query: 121 ------TCHHSP---EIYPGISEQRSRQIIQDFFKERR 149 H ++ G+ + + + +++FF+ RR Sbjct: 121 SERAPVRAHPFTPDLDVKGGVLAEETGEAMREFFRRRR 158 >gi|291521867|emb|CBK80160.1| Cytosine/adenosine deaminases [Coprococcus catus GD/7] Length = 175 Score = 151 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 6/149 (4%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A+ +Q A P GAV V N +I+ N+ D T H E IR Sbjct: 22 TEDASFMREAIRLSQLAVEHGNEPFGAVLVKNGEIVFTNENQIYTRHDPTFHGEAGLIRE 81 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-----ENGTQF 116 C S L + LY + EPC MC+ A+ ++ RL YGASN I N ++ Sbjct: 82 FCAKTSITDLHDYTLYSSCEPCFMCSGAMVWVKLGRLVYGASNSDLEAILGNEGCNCSKI 141 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + P++ GI S I++D+F Sbjct: 142 VFDNSF-WQPQVTAGILRAESLMILKDYF 169 >gi|282878399|ref|ZP_06287187.1| guanine deaminase [Prevotella buccalis ATCC 35310] gi|281299477|gb|EFA91858.1| guanine deaminase [Prevotella buccalis ATCC 35310] Length = 155 Score = 151 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 10/145 (6%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + ++ M A+ ++ + P GAV + +II+ A N D TAHAE+ AIR Sbjct: 1 MNQQDI-MRRAIALSEKSVRTGGGPFGAVIAKDGEIIAEASNTVTLDHDPTAHAEVNAIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF---- 116 L L D+Y + EPC MC AI A + R+YY + I F Sbjct: 60 QAAHKLGTFDLTGCDIYTSCEPCPMCLGAIYWAHLDRIYYANNRKDAARIGFDDDFIYHE 119 Query: 117 --YTLATCHHSPEIYPGISEQRSRQ 139 A H +I + + +R+ Sbjct: 120 IALQPADRHKQMQI---LLPEEARK 141 >gi|324529700|gb|ADY49034.1| Guanine deaminase [Ascaris suum] Length = 153 Score = 151 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 4/131 (3%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A++EA + P GAV V NN II+ N + D TAHAEI AIR C Sbjct: 3 FMRKAIDEACQGVDNGDGGPFGAVIVRNNSIIATGHNMVLKTNDPTAHAEITAIRNACSA 62 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LY + PC MC A +R+ +YY + + + + + Sbjct: 63 LGTFDLSGCQLYTSCYPCPMCMGAALWSRVNAIYYATTPEDAEAVGFDDKAFYEFLKNP- 121 Query: 126 PEIYPGISEQR 136 + G+ + Sbjct: 122 --VSDGVRKVE 130 >gi|325856346|ref|ZP_08172062.1| guanine deaminase [Prevotella denticola CRIS 18C-A] gi|327312522|ref|YP_004327959.1| guanine deaminase [Prevotella denticola F0289] gi|325483530|gb|EGC86502.1| guanine deaminase [Prevotella denticola CRIS 18C-A] gi|326944415|gb|AEA20300.1| guanine deaminase [Prevotella denticola F0289] Length = 155 Score = 151 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 6/143 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K + M A+E + ++ P GAV N +II+ N D TAHAE+ IR Sbjct: 1 MTKEEL-MRRAIELSADSVRNGGGPFGAVIARNGEIIAEGSNGVTIYNDPTAHAEVSTIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L+ L ++Y + EPC MC AI A + ++YY GI F Sbjct: 60 KACQKLNTFDLTGCEIYTSCEPCPMCLGAIYWAHLDKIYYANDRKDAAGIGFDDDFIYQE 119 Query: 121 TCHHSPEIYPGISEQRSRQIIQD 143 E+ P ++ S ++++ Sbjct: 120 -----IELKPQYRKKPSEILLRN 137 >gi|317051257|ref|YP_004112373.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum S5] gi|316946341|gb|ADU65817.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum S5] Length = 157 Score = 151 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 43/132 (32%), Positives = 60/132 (45%), Gaps = 2/132 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M V+M A+ A+ + P GAV V +++ R N D TAHAEI+AI Sbjct: 1 MSDHRVYMEQAIAMARQNIDSGDGGPFGAVIVREGQVVGRGRNGVTSSLDPTAHAEIVAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YT 118 R C L L + D+Y + EPC MC AI AR+R +YY A+ + +F Y Sbjct: 61 RDACANLKTFHLEDCDIYTSCEPCPMCLGAIYWARLRAIYYAANRQDAARVNFSDEFIYE 120 Query: 119 LATCHHSPEIYP 130 + P Sbjct: 121 QIGVDPRFRVIP 132 >gi|325838575|ref|ZP_08166576.1| guanine deaminase [Turicibacter sp. HGF1] gi|325490801|gb|EGC93104.1| guanine deaminase [Turicibacter sp. HGF1] Length = 154 Score = 151 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 1/116 (0%) Query: 5 NVFMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A+EEA+N ++ P GAV V +N++I++A N + D T HAEI AIR+ Sbjct: 2 EKYMKMAIEEAENGVKCKHGGPFGAVIVKDNQVIAKAHNTVVKENDPTCHAEINAIRLAS 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R L+ L + L+ + EPC MC +AI A I +YYG + I +F Sbjct: 62 RTLNTFKLNDCLLFTSSEPCPMCLSAILWAGIETVYYGCTVEDANKIGFADEFIYD 117 >gi|332707396|ref|ZP_08427446.1| cytosine/adenosine deaminase [Lyngbya majuscula 3L] gi|332353887|gb|EGJ33377.1| cytosine/adenosine deaminase [Lyngbya majuscula 3L] Length = 150 Score = 151 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 9/142 (6%) Query: 8 MSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ A+ + + P GAV V + +II++A N+ D TAHAEI+AIR C++L Sbjct: 1 MNEAIALSVISVRSGKGGPFGAVVVKDGEIIAKAHNQVTSTNDPTAHAEIVAIRDACKVL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF----YTLATC 122 L +LY + EPC MC AI AR+ ++YY + I +F L Sbjct: 61 QTFQLTGCELYTSCEPCPMCLGAIYWARLDKVYYANTKADAAQIGFDDKFIYEELDLPIS 120 Query: 123 HHSPEIYPGISEQRSRQIIQDF 144 I + + ++ F Sbjct: 121 DRKLPIIQ-LMPDEA---LRAF 138 >gi|301096603|ref|XP_002897398.1| tRNA-specific adenosine deaminase, putative [Phytophthora infestans T30-4] gi|262107089|gb|EEY65141.1| tRNA-specific adenosine deaminase, putative [Phytophthora infestans T30-4] Length = 130 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 47/125 (37%), Positives = 66/125 (52%), Gaps = 3/125 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + FM AL E + A +R E+PVG V V +II+ A NR EL + T HAEI+AI Sbjct: 3 IDEHEHFMREALLEGERALIRAEVPVGCVFVHKGEIIASASNRVNELCNATMHAEIVAIE 62 Query: 61 MGCRILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 E+L + LYVT EPC MCA A++ I+R+Y+G N + GG + + Sbjct: 63 AIAAKYGDKACEVLADCTLYVTCEPCIMCAGALAHVSIKRVYFGCHNDRFGGCSSVLNLH 122 Query: 118 TLATC 122 Sbjct: 123 ERRCL 127 >gi|21228824|ref|NP_634746.1| hypothetical protein MM_2722 [Methanosarcina mazei Go1] gi|20907345|gb|AAM32418.1| hypothetical protein MM_2722 [Methanosarcina mazei Go1] Length = 161 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 3/146 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +K + + A+E + + R P GAV V N KI+S + N+ D TAHAEI AIR Sbjct: 7 EKDLLLIRRAIELSLESVKRGGGPFGAVIVKNGKIVSESYNQVTLHNDPTAHAEIGAIRE 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-- 119 R L+ L +Y++ EPC MC AI ARI ++++ ++ I F Sbjct: 67 AARKLNTFDLSGCSIYISCEPCPMCLGAIYWARIDKVFFASTRSDAENIGFDDSFIYEEI 126 Query: 120 -ATCHHSPEIYPGISEQRSRQIIQDF 144 + + + + + + + + Sbjct: 127 SRPMNERKIDFKQLLREEALEAFRAW 152 >gi|255017439|ref|ZP_05289565.1| tRNA-specific adenosine deaminase [Listeria monocytogenes FSL F2-515] Length = 109 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 39/101 (38%), Positives = 60/101 (59%) Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 + HAE+LAI+ C+ + L +LYVTLEPC MC+ AI L+RI ++YYGA +PK G Sbjct: 1 NAVTHAELLAIQDACKHQNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAG 60 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +H+ E+ G+ E S ++++ FF+E R Sbjct: 61 TAGSLMNLLQDDRFNHTCEVEAGLMESESSEMLKSFFQELR 101 >gi|241617471|ref|XP_002406922.1| tRNA-specific adenosine deaminase, putative [Ixodes scapularis] gi|215500893|gb|EEC10387.1| tRNA-specific adenosine deaminase, putative [Ixodes scapularis] Length = 188 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 8/149 (5%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + M + A+ A E+PVG V ++I+R NR + K+ HAE+ + Sbjct: 20 DDDNGMDACFQLAEEALAAGEVPVGCVMFYAGQVIARGRNRVNKTKNACRHAEMDCVDQV 79 Query: 63 CRILS------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + E+ V ++VT+EPC MCAAA+ R+ R+ +G N + GG+ + Sbjct: 80 LDWCAERGLDTGEVFRGVSVFVTVEPCIMCAAALDSLRVSRVVFGCPNERFGGVGSVLDV 139 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + G+ +R+ ++++F+ Sbjct: 140 LR--GTGGRTVVVAGVRAERAVNLLKEFY 166 >gi|224536998|ref|ZP_03677537.1| hypothetical protein BACCELL_01874 [Bacteroides cellulosilyticus DSM 14838] gi|224521365|gb|EEF90470.1| hypothetical protein BACCELL_01874 [Bacteroides cellulosilyticus DSM 14838] Length = 188 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 39/112 (34%), Positives = 50/112 (44%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A+ A+ P GAV N +II+ NR D TAHAE+ AIR C+ Sbjct: 37 EELMRKAIVLAEENVDNGGGPFGAVIARNGEIIATGVNRVTAEHDPTAHAEVSAIRAACK 96 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L L ++Y + EPC MC AI A I ++YYG I F Sbjct: 97 KLGTFDLSGCEIYTSCEPCPMCLGAIYWAHIDKMYYGNDKADAKRIGFDDSF 148 >gi|21673423|ref|NP_661488.1| cytosine deaminase [Chlorobium tepidum TLS] gi|21646524|gb|AAM71830.1| cytosine deaminase [Chlorobium tepidum TLS] Length = 148 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 45/149 (30%), Positives = 65/149 (43%), Gaps = 14/149 (9%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + + FM+ ALE+A+ + +PVGAV V N K+++ N+ + D AH E+ IR Sbjct: 1 MNRDHEFMALALEQARKSYDEGGVPVGAVMVENGKVLAAGHNQRVQQGDPIAHGEMDCIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R V LY TL PC MCA AI I R+ G G + Sbjct: 61 KAGRCA---RYDTVTLYTTLSPCMMCAGAIVQFGIGRVVVGEDRNFKGNAGFLRE----- 112 Query: 121 TCHHSPEIYPGISEQR-SRQIIQDFFKER 148 H E+ + + R ++ F ER Sbjct: 113 ---HGVEVS--LLDDEGCRSLMDAFIAER 136 >gi|224087290|ref|XP_002308113.1| predicted protein [Populus trichocarpa] gi|222854089|gb|EEE91636.1| predicted protein [Populus trichocarpa] Length = 155 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 9/121 (7%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A+E+A++A E+PVG V V + K+I+ NR E ++ T HAE+ AI + Sbjct: 15 AFMELAIEQAEDALNSLEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAIDVLLEQ 74 Query: 66 LSQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + E + LYVT EPC MCAAA+S+ I+ +YYG +N K GG + Sbjct: 75 WQKIGLSVSEVAEKISTCSLYVTCEPCIMCAAALSILGIKEVYYGCANDKFGGCGSILSL 134 Query: 117 Y 117 + Sbjct: 135 H 135 >gi|71907361|ref|YP_284948.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Dechloromonas aromatica RCB] gi|71846982|gb|AAZ46478.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Dechloromonas aromatica RCB] Length = 157 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 42/135 (31%), Positives = 58/135 (42%), Gaps = 2/135 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M + F++ A+E A+ + E P GAV V + +II+ NR D TAHAEI AI Sbjct: 1 MNPDDQFLARAIELARQGSESGEGGPFGAVIVRDGRIIAEGWNRVVASHDPTAHAEIGAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R C L LY + EPC MC +A ARI R+ + S + I Sbjct: 61 RTACAGQDHFHLHGCTLYASSEPCPMCLSAAYWARIERIVFANSRAEAAAIGFCDDELYS 120 Query: 120 ATCHHSPEIYPGISE 134 + + E Sbjct: 121 E-LNRHFSARSIVME 134 >gi|91201071|emb|CAJ74129.1| strongly similar to fungal cytosine deaminase [Candidatus Kuenenia stuttgartiensis] Length = 145 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 12/143 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A+EEA+ L IP+G+V V + +II R N+ + + AHAEI + R Sbjct: 2 DRFMRTAIEEAKQGLLEGGIPIGSVLVKDGEIIGRGHNKRVQENNPIAHAEIDCLVNSGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + LY TL PC +CA AI RI+++ G S G E F L H Sbjct: 62 VGK---YSGTTLYSTLMPCYLCAGAIVQFRIKKIVVGESETFSGAKE----FMEL----H 110 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 EI ++ + +Q+++DF + Sbjct: 111 GVEIID-LNIEECKQLMKDFIQN 132 >gi|311067822|ref|YP_003972745.1| guanine deaminase [Bacillus atrophaeus 1942] gi|310868339|gb|ADP31814.1| guanine deaminase [Bacillus atrophaeus 1942] Length = 156 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 40/119 (33%), Positives = 51/119 (42%), Gaps = 1/119 (0%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N F+ A+E A P GAV V + KII+ N D TAHAE+ AIR Sbjct: 2 NHNEFLQRAVELATEGVNAGIGGPFGAVIVKDGKIIAEGQNNVTTSNDPTAHAEVTAIRN 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C L L + LY + EPC MC AI AR + +YY + + F Sbjct: 62 ACEALGSYQLDDCILYTSCEPCPMCLGAIYWARPKAVYYASEHTDAANAGFDDSFIYDE 120 >gi|308803957|ref|XP_003079291.1| Cytosine deaminase FCY1 and related enzymes (ISS) [Ostreococcus tauri] gi|116057746|emb|CAL53949.1| Cytosine deaminase FCY1 and related enzymes (ISS) [Ostreococcus tauri] Length = 205 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 12/154 (7%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M AL EA+ A E+P G V + +I++R N ++ T HAE A+ Sbjct: 27 DRAHMREALREARRALDAWEVPCGCALVRDGEIVARGRNATNRTRNGTRHAEFEAVDALL 86 Query: 64 RILSQEI----LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT- 118 R ++ E+ LYVT EPC MCA A+S +RR+ YG +N K GG + Sbjct: 87 RAHDGDVDACGFEEMTLYVTCEPCVMCAGAMSALGVRRVVYGCANDKFGGNGTVLDVHDS 146 Query: 119 -------LATCHHSPEIYPGISEQRSRQIIQDFF 145 + T + E G+ E + ++ QDF+ Sbjct: 147 GCGRCDGVGTKGATYESVGGLFETEAIRLFQDFY 180 >gi|89097617|ref|ZP_01170506.1| guanine deaminase [Bacillus sp. NRRL B-14911] gi|89087913|gb|EAR67025.1| guanine deaminase [Bacillus sp. NRRL B-14911] Length = 159 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 54/112 (48%), Gaps = 1/112 (0%) Query: 6 VFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+E A +NAA P GAV V + +I NR L D TAHAEI AIR C Sbjct: 8 YFMENAVEAALENAAAHLGGPFGAVVVKDGTVIGTGTNRVTSLNDPTAHAEIQAIRAACL 67 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L L ++Y + EPC MC AI AR + +Y+ + QF Sbjct: 68 HLQDFQLSGCEIYTSCEPCPMCFGAIYWARPKAVYFACTKEDAAAAGFDDQF 119 >gi|293375825|ref|ZP_06622095.1| putative guanine deaminase [Turicibacter sanguinis PC909] gi|292645602|gb|EFF63642.1| putative guanine deaminase [Turicibacter sanguinis PC909] Length = 154 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 1/113 (0%) Query: 5 NVFMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A+EEA+N ++ P GAV V +N++I++A N + D T HAEI AIR+ Sbjct: 2 EKYMKMAIEEAENGVKCKHGGPFGAVIVKDNQVIAKAHNTVVKENDPTCHAEINAIRLAS 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 R L+ L + L+ + EPC MC +AI A I +YYG + I +F Sbjct: 62 RTLNTFKLNDCLLFTSSEPCPMCLSAILWAGIETVYYGCTVEDANKIGFADEF 114 >gi|315647606|ref|ZP_07900708.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus vortex V453] gi|315277045|gb|EFU40386.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus vortex V453] Length = 159 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 38/119 (31%), Positives = 51/119 (42%), Gaps = 1/119 (0%) Query: 3 KGNVFMSCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A+EEA P GA+ V K+I R N L D TAHAE+ AIR Sbjct: 5 NHEYWMQIAIEEAHQNVQNVEGGPFGAIVVKEGKVIGRGRNLVTALNDPTAHAEVQAIRE 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C + L +Y + EPC MC AI +R +YY ++ + I F Sbjct: 65 ACLHMEDFQLKGCTIYTSCEPCPMCLGAIYWSRPDAVYYASTKKEAAEIGFDDHFIYDE 123 >gi|220907233|ref|YP_002482544.1| CMP/dCMP deaminase [Cyanothece sp. PCC 7425] gi|219863844|gb|ACL44183.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7425] Length = 144 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 12/144 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A+ EA+ IP+G+V V N +II R N+ + + HAEI ++ R Sbjct: 2 DQFMQAAIAEARTGLQEGGIPIGSVLVKNGEIIGRGHNQRVQQGNPIIHAEIDCLQQAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 I + LY TL PC +CA A+ I+++ G S G E H Sbjct: 62 IG---RYQDTTLYSTLMPCYLCAGAVVQFGIKKVIAGESYTFPGAREFMES--------H 110 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 E+ + Q +Q++QDF + + Sbjct: 111 GVEVID-LDLQECKQLMQDFIQAK 133 >gi|126732068|ref|ZP_01747870.1| cytidine and deoxycytidylate deaminase family protein [Sagittula stellata E-37] gi|126707357|gb|EBA06421.1| cytidine and deoxycytidylate deaminase family protein [Sagittula stellata E-37] Length = 149 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 61/116 (52%), Positives = 81/116 (69%) Query: 34 NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93 +++RAGNR REL D TAHAE+LA+R C + LP DLYVTLEPC MCAAAIS A Sbjct: 34 GAVVARAGNRTRELSDPTAHAEMLALRAACAAAGSDRLPGHDLYVTLEPCPMCAAAISFA 93 Query: 94 RIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 R+ R+YYGA++PK GG+ G + ++ CHH PE+Y GI + + ++ FF+ERR Sbjct: 94 RVARVYYGAADPKSGGVAQGPRVFSHPQCHHVPEVYDGIGAEAASALLTGFFRERR 149 >gi|261188113|ref|XP_002620473.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2 [Ajellomyces dermatitidis SLH14081] gi|239593348|gb|EEQ75929.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2 [Ajellomyces dermatitidis SLH14081] gi|239609090|gb|EEQ86077.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2 [Ajellomyces dermatitidis ER-3] Length = 187 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 13/148 (8%) Query: 13 EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72 E+ + A E PVG V V N+++I N + + T HAE LAI R + I Sbjct: 3 EKGEEALASGETPVGCVLVHNDEVIGSGMNDTNKSMNGTRHAEFLAIEEVLRSHPRSIFR 62 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL------------- 119 E DLYVT+EPC MCA+A+ +IR +Y+G +N + GG + ++ Sbjct: 63 ETDLYVTVEPCIMCASALRQYQIRHVYFGCANERFGGTGGVLKLHSEKSLLKLPGIISGS 122 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + G+ + + +++ F+ + Sbjct: 123 PGIDPPYGLTGGLFRKEAIMLLRRFYIQ 150 >gi|226310134|ref|YP_002770028.1| guanine deaminase [Brevibacillus brevis NBRC 100599] gi|226093082|dbj|BAH41524.1| guanine deaminase [Brevibacillus brevis NBRC 100599] Length = 156 Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 2/128 (1%) Query: 1 MKKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M++ +M A++ A +N + P GA+ V + +++ R N D TAHAEI AI Sbjct: 1 MER-ETWMGQAVQIAFENVRDKVGGPFGALVVKDGQVVGRGRNEVTTSNDPTAHAEIQAI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R CR L L + DLY + EPC MC AI AR R +YY + + QF Sbjct: 60 REACRHLETFQLNDCDLYTSCEPCPMCLGAIYWARPRNVYYACTKEDAAHVGFDDQFIYE 119 Query: 120 ATCHHSPE 127 E Sbjct: 120 QIVLPHEE 127 >gi|260549627|ref|ZP_05823845.1| guanine deaminase [Acinetobacter sp. RUH2624] gi|260407420|gb|EEX00895.1| guanine deaminase [Acinetobacter sp. RUH2624] Length = 160 Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 1/120 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK+ +F+ ALE A + + P GAV V + K+I+ N+ D TAHAE+LAIR Sbjct: 1 MKENQMFLRQALELAYHNVEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFYTL 119 ++L L ++ + PC MC AA+ LA I+ ++Y SN G + T+ Y Sbjct: 61 AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVHYAYSNEDGKPFGLSTTEIYAD 120 >gi|237708779|ref|ZP_04539260.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 9_1_42FAA] gi|265755955|ref|ZP_06090422.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_1_33FAA] gi|229457205|gb|EEO62926.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 9_1_42FAA] gi|263234033|gb|EEZ19634.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_1_33FAA] Length = 155 Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 44/150 (29%), Positives = 64/150 (42%), Gaps = 10/150 (6%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MKK + M A+E + P GAV + +II+ NR D TAHAE+ AIR Sbjct: 1 MKKEEL-MRKAIELSIENVANGGGPFGAVIAKDGEIIATGVNRVTSQCDPTAHAEVSAIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTL 119 L L ++Y + EPC MC AI AR+ ++YY + I F Y Sbjct: 60 AAATKLGTFNLSGCEIYTSCEPCPMCLGAIYWARLDKMYYANNKTDAKNIGFDDSFIYDE 119 Query: 120 ATCHHSP-----EIYPGISEQRSRQIIQDF 144 + S EI + + + + Q + Sbjct: 120 LSLKPSARKLPSEI---LLAEEAIKAFQQW 146 >gi|73670513|ref|YP_306528.1| dCMP deaminase [Methanosarcina barkeri str. Fusaro] gi|72397675|gb|AAZ71948.1| dCMP deaminase [Methanosarcina barkeri str. Fusaro] Length = 157 Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 4/118 (3%) Query: 1 MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M + FM A+E + + P GAV V N +I++ + N L D TAHAEI I Sbjct: 1 MSDNDFLFMKRAIELSLENVKKGGGPFGAVIVRNGEILAESCNMVTALNDPTAHAEINVI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG--ASNP-KGGGIENGT 114 R R L L +Y + EPC MC AI ARI ++ + AS+ K G ++ Sbjct: 61 REAARKLETFDLSGCTIYASCEPCPMCLGAIYWARIGKVVFANTASDAQKIGFADSLI 118 >gi|94676768|ref|YP_588482.1| cytidine/deoxycytidylate deaminase family protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219918|gb|ABF14077.1| cytidine/deoxycytidylate deaminase family protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 158 Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 45/129 (34%), Positives = 65/129 (50%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 + E+PVGA+ VL K I N + D TAHAEILA+R G + + + +YVTL Sbjct: 14 KGEVPVGAILVLEGKKIGEGLNSSIHYHDPTAHAEILALRQGGKTIGNYRITGAVMYVTL 73 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MC A+ ARI R+ +GA K + + +H+ + P I + Sbjct: 74 EPCLMCIGAMIHARISRIAFGAKAVKNNEMSLCLSVLSSTQINHNITLCPNILAEACSLQ 133 Query: 141 IQDFFKERR 149 + FFK +R Sbjct: 134 LSTFFKRKR 142 >gi|163787392|ref|ZP_02181839.1| cytidine/deoxycytidylate deaminase family protein [Flavobacteriales bacterium ALC-1] gi|159877280|gb|EDP71337.1| cytidine/deoxycytidylate deaminase family protein [Flavobacteriales bacterium ALC-1] Length = 159 Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 56/116 (48%), Gaps = 1/116 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +K FM A+ A NE P G V V + +I+ R N+ D TAHAE+ AIR Sbjct: 4 EKKEKFMLEAVNAALKGMNNNEGGPFGCVVVKDGEIVGRGNNKVTSTNDPTAHAEVTAIR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 C+ L L +Y + EPC MC AI AR ++YYG++ I +F Sbjct: 64 DACKNLDSFQLEGCQIYTSCEPCPMCLGAIYWARPDKVYYGSNQVDAANIGFDDEF 119 >gi|328771384|gb|EGF81424.1| hypothetical protein BATDEDRAFT_87367 [Batrachochytrium dendrobatidis JAM81] Length = 182 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 15/157 (9%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ A +A E+PVG V V +K II + NR E + HAE AI Sbjct: 7 QDDKKYMTMALQLASDAYDVGEVPVGCVFVHASKGIIGQGRNRTNESLNGVRHAEFEAID 66 Query: 61 MGCRILSQEI---------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 + E P+ D+YVT+EPC MCA+A+ +IRR+ +G N K GG Sbjct: 67 QIMSMRPLETDLDTYVKTTFPQTDVYVTVEPCIMCASALRHLQIRRVVFGCGNDKFGGCG 126 Query: 112 NGTQFYTL---ATCHHSPEIYPGISEQRSRQIIQDFF 145 + + A ++ G+ + + ++ F+ Sbjct: 127 SVFHIHDDGVGAGFNYPA--VGGLFKNEAIMALRRFY 161 >gi|254459431|ref|ZP_05072850.1| guanine deaminase [Campylobacterales bacterium GD 1] gi|207083841|gb|EDZ61134.1| guanine deaminase [Campylobacterales bacterium GD 1] Length = 152 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%) Query: 5 NVFMSCALEEAQNA-ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 N +M A +EA + P GAV V ++KIIS+A N+ + D TAHAE+ AIR Sbjct: 2 NKWMKIAYDEATEGMLANDGGPFGAVIVKDDKIISQAHNQVLKSNDPTAHAEVNAIRKAS 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 +L L LY + PC MC AI ARI +YY A+ Sbjct: 62 EVLETFDLSGCVLYTSCMPCPMCLGAIFWARIETVYYSATEEDA 105 >gi|149248448|ref|XP_001528611.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146448565|gb|EDK42953.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 271 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 4/148 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + FM+ AL A L+NE PV V +IIS N + T HAE +A+ Sbjct: 5 LSQHFKFMAVALFVGYKALLKNETPVACVVTRGCQIISIGYNHTNITLNGTKHAEFIAL- 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R+ + LYVT+EPC MCA+ + ++ + YG N + GG + Sbjct: 64 --GRLKEPVDYKNLTLYVTVEPCIMCASYLRQLGLKNVIYGCGNDRFGGAGTILPLHNDP 121 Query: 121 TCHHSP-EIYPGISEQRSRQIIQDFFKE 147 H P GI + Q++++F+ + Sbjct: 122 KLPHKPLTCIDGICRTEAIQLLRNFYIQ 149 >gi|115378509|ref|ZP_01465666.1| tRNA-specific adenosine deaminase [Stigmatella aurantiaca DW4/3-1] gi|115364478|gb|EAU63556.1| tRNA-specific adenosine deaminase [Stigmatella aurantiaca DW4/3-1] Length = 148 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 49/128 (38%), Positives = 67/128 (52%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAVAV ++I NR + AHAE+LA+ R L L V LYVTLE Sbjct: 15 GEVPVGAVAVHQGQVIGTGFNRREIDRHPFAHAELLALDAAARSLGVWRLTGVTLYVTLE 74 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MCA A+ R+ RL +G +PK G + +H ++ GI SRQ++ Sbjct: 75 PCAMCAGAMVQGRVTRLVFGTLDPKAGAAGSLYNLVEEPRHNHRLQVTSGILADESRQLL 134 Query: 142 QDFFKERR 149 + FF+ R Sbjct: 135 KGFFERLR 142 >gi|328857268|gb|EGG06385.1| hypothetical protein MELLADRAFT_86571 [Melampsora larici-populina 98AG31] Length = 171 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 8/146 (5%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 MS A++ A+ A NEIPVG V + L+ K+IS+ NR E ++ + HAE A+ Sbjct: 1 MSEAIKMAEEAFSANEIPVGCVFINELDGKLISKGRNRTNETRNASLHAEFDALSSLLPN 60 Query: 66 LSQEILP----EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + LYVT+EPC MC++A+ I+++++G SN + GG + Sbjct: 61 PKNPNLKTDFKNLTLYVTVEPCLMCSSALRQIGIKKVFFGCSNDRFGGCGGVISIHNDPR 120 Query: 122 CHHS--PEIYPGISEQRSRQIIQDFF 145 S Y G + + +++ F+ Sbjct: 121 LLFSEPFVAYGGYRREEAIILLRKFY 146 >gi|293608518|ref|ZP_06690821.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829091|gb|EFF87453.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 161 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 42/107 (39%), Positives = 57/107 (53%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+KG F+ A+E A + P GAV V N +II+ N+ D TAHAE+LAIR Sbjct: 2 MEKGEQFLRKAIELAYKNIEKGGRPFGAVVVKNGEIIASGVNQILVTNDPTAHAELLAIR 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 ++L L +Y + PC MC AA+ LA I+ + Y SN G Sbjct: 62 AASQVLGSANLEGCSVYASGHPCPMCMAAMRLAGIKSVSYAYSNEDG 108 >gi|91772283|ref|YP_564975.1| CMP/dCMP deaminase, zinc-binding [Methanococcoides burtonii DSM 6242] gi|91711298|gb|ABE51225.1| Guanine deaminase [Methanococcoides burtonii DSM 6242] Length = 159 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 45/115 (39%), Positives = 58/115 (50%), Gaps = 3/115 (2%) Query: 1 MKKG--NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M + FM A++EAQ NE P GAV V ++ IIS+ N D +AHAEI+ Sbjct: 1 MSEHLMEYFMDAAVKEAQKGMRNNEGGPFGAVIVKDDTIISKGHNEVLGTNDPSAHAEIV 60 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 AIR L L +LY T PC MC +AI ARI ++YYG S + Sbjct: 61 AIRKASAALEDFDLSGCELYATTMPCPMCLSAIMWARIGKIYYGTSTEDVASLGF 115 >gi|33861475|ref|NP_893036.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33634052|emb|CAE19377.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 165 Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 2/145 (1%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M L ++ E+P+ AV + N + I R N+ D HAE++A+R Sbjct: 19 KWMKFILRRSEEVGKV-ELPITAVIIDENGRCIGRGSNKREINNDPLGHAELIALRQASW 77 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 I + E + V LEPCTMCAAA+ AR+ ++ YG + K GG + HH Sbjct: 78 IKNDWRFNECSIIVNLEPCTMCAAALVQARMGQVIYGTKDDKRGGFGGTIDLSKHESAHH 137 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 ++ G+ Q + I+ +FK+ R Sbjct: 138 KMKVVGGVLNQDCKNNIKLWFKKMR 162 >gi|307170830|gb|EFN62941.1| tRNA-specific adenosine deaminase 2 [Camponotus floridanus] Length = 171 Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 38/148 (25%), Positives = 75/148 (50%), Gaps = 8/148 (5%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + +M AL++A+ + E+PVG + + NN+II+ N E + T HAEI I + Sbjct: 4 SAWMDVALQKAEESLRAGEVPVGCLFIYNNEIIATGNNTVNETCNATRHAEINCIDQVLK 63 Query: 65 ILSQEILPEVDLY------VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 ++ L ++ VT+EPC MC +A+ ++ + YG +N + GG + + Sbjct: 64 FCKEKCLQYETVFRNLDVVVTVEPCIMCISALLQLQVHSIIYGCANDRFGGCVSVLEV-- 121 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146 I + ++++ ++++DF+K Sbjct: 122 PKFYDPKVLIQGNVKKEQAMKLLKDFYK 149 >gi|296118010|ref|ZP_06836592.1| tRNA-specific adenosine deaminase [Corynebacterium ammoniagenes DSM 20306] gi|295968896|gb|EFG82139.1| tRNA-specific adenosine deaminase [Corynebacterium ammoniagenes DSM 20306] Length = 151 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 48/144 (33%), Positives = 68/144 (47%), Gaps = 3/144 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+ A ++PVGAV + ++ NR L D TAHAE+ AIR R Sbjct: 4 MQRALDVAATTPA-GDVPVGAVIYGPDGAELATGVNRREALADPTAHAEVEAIRAAVREY 62 Query: 67 SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L +L VTLEPC MCA A AR+ + +GA PK G + Sbjct: 63 GDSWRLEGCELVVTLEPCAMCAGAAQAARVSSVVFGAWEPKTGACGSLVDVLRAPGALFV 122 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 PE+ G+ E +++++ FF+ R Sbjct: 123 PEVRAGVLEAECQEVLRKFFENLR 146 >gi|194743340|ref|XP_001954158.1| GF18139 [Drosophila ananassae] gi|190627195|gb|EDV42719.1| GF18139 [Drosophila ananassae] Length = 160 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 9/147 (6%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A EA+ A E+PVG V VL +K+I+R GN ++ T HAE + I Sbjct: 3 AFMEEAFIEARRARDAGEVPVGCVFVLGDKVIARGGNEVNVHRNATRHAEFICIDATLAY 62 Query: 66 LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 ++ LP E+ + VT+EPC MC+AA+ ++ + YG N + GG T Sbjct: 63 CREKRLPARQMFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVA 119 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146 A +I G+ + ++++F+K Sbjct: 120 AVVGQRIDITGGVRADEAMALLKEFYK 146 >gi|159471219|ref|XP_001693754.1| predicted protein [Chlamydomonas reinhardtii] gi|158283257|gb|EDP09008.1| predicted protein [Chlamydomonas reinhardtii] Length = 143 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 2/129 (1%) Query: 22 NEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 +E+PVGAV V + +++ NR L+ AHAE+L + G L LYVT Sbjct: 15 DEVPVGAVLVAADGATVLAAGHNRVHRLRSPLAHAEMLCLAAGAARSRAWRLLGTTLYVT 74 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MCA A+ AR+ R+ YGA P+ G + H S + G + Sbjct: 75 LEPCPMCAGALMQARVGRVVYGARQPRLGADGSWAPPPPPHPFHDSIVVEGGCLAEECAD 134 Query: 140 IIQDFFKER 148 +++ FF+ R Sbjct: 135 VMRAFFRRR 143 >gi|209879105|ref|XP_002140993.1| cytidine/deoxycytidylate deaminase family protein [Cryptosporidium muris RN66] gi|209556599|gb|EEA06644.1| cytidine/deoxycytidylate deaminase family protein [Cryptosporidium muris RN66] Length = 189 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 22/163 (13%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL+ A A +EIPVG + V +I S A N + T H E++A+ Sbjct: 10 FFMKEALKWATKAFDTDEIPVGCILVNRETKEIESAAHNETNISCNATRHCEVVALERLA 69 Query: 64 RILSQEILPE-------------------VDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 L QE L DL+VT+EPC MC ++ A I+ +YYG N Sbjct: 70 DKLIQE-LDGINCKDINTKFPLKPEFGQYYDLFVTVEPCIMCIGILNQAGIKGIYYGCKN 128 Query: 105 PKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + GG + F+ + + +I I + +++QDF++ Sbjct: 129 DRFGGCGSVIDFHDVIDINSEIQIKSNILADEAIKLLQDFYER 171 >gi|219113417|ref|XP_002186292.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209583142|gb|ACI65762.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 180 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 17/155 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK----IISRAGNRNRELKDVTAHAEILAIRMG- 62 M AL A+ A E+PVG V V+ + ++S N+ +D T E IR G Sbjct: 1 MRQALRVAKAALDIGEVPVGCVIVMPTETGPVVVSHGANQVNATRDGTWKHEKQNIREGT 60 Query: 63 -----------CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 R E L + LYVT EPC MCAAA++ +I ++Y+G N K GG Sbjct: 61 GEWRNAYGWGSGRRFKPEELKKCRLYVTCEPCIMCAAALAQVQISKVYFGCRNDKFGGCG 120 Query: 112 NGTQFYTLATCHHS-PEIYPGISEQRSRQIIQDFF 145 + + HH+ + G+ E + +++ F+ Sbjct: 121 SILHLHKDHPPHHAGYPVSGGMLEDDAVGLLRSFY 155 >gi|189466441|ref|ZP_03015226.1| hypothetical protein BACINT_02816 [Bacteroides intestinalis DSM 17393] gi|189434705|gb|EDV03690.1| hypothetical protein BACINT_02816 [Bacteroides intestinalis DSM 17393] Length = 175 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 40/120 (33%), Positives = 53/120 (44%), Gaps = 1/120 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K + M A+E + P GAV + +II+ NR D TAHAE+ AIR Sbjct: 21 MTKEEL-MRKAIELSTENVANGGGPFGAVIAKDGEIIATGTNRVTASCDPTAHAEVSAIR 79 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L ++Y + EPC MC AI AR+ R+YYG + I F Sbjct: 80 AAATKLGTFNLSGCEIYTSCEPCPMCLGAIYWARLERMYYGNNKTDAKNIGFDDSFIYDE 139 >gi|209548305|ref|YP_002280222.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534061|gb|ACI53996.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 157 Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 5/150 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ F+ A+ +++A + + P G+V V + ++I RA N D+T HAE+ I+ Sbjct: 1 MENHEPFLREAIALSKSAMDQGDEPFGSVLVKDGEVILRAENSVFTGHDMTNHAEMNLIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTL 119 + L + LY + EPC MC+ AI + I R+ + S + G I G + Sbjct: 61 SAAKHYDTGFLADCTLYTSTEPCAMCSGAIYWSGIGRMVFACSEARLGEIAGIGLNVPSR 120 Query: 120 ATCH---HSPEIYPGI-SEQRSRQIIQDFF 145 A + + E + ++ Q F+ Sbjct: 121 AVLQTGARTVTVVGPTNLEDEAAEVHQAFW 150 >gi|195110631|ref|XP_001999883.1| GI24773 [Drosophila mojavensis] gi|193916477|gb|EDW15344.1| GI24773 [Drosophila mojavensis] Length = 160 Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats. Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 9/147 (6%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL EA+ A E+PVG V V N+K+I+R GN ++ T HAE + I Sbjct: 3 AFMEEALVEARRARDAGEVPVGCVFVHNDKVIARGGNEVNVHRNATRHAEFICIDATLAY 62 Query: 66 LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 ++ LP E+ + VT+EPC MC+AA+ ++ + YG N + GG T Sbjct: 63 CREKRLPARQVFSEISVVVTVEPCIMCSAALHTLAVKEIIYGCENDRFGG---KTVIDVA 119 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146 A I G+ + +++DF+K Sbjct: 120 AVVGQQINITGGVRADEAMALLKDFYK 146 >gi|193212272|ref|YP_001998225.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327] gi|193085749|gb|ACF11025.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327] Length = 148 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 47/149 (31%), Positives = 65/149 (43%), Gaps = 14/149 (9%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM+ ALE+A+ + +PVGAV V N K+I+ N+ + D AH E+ IR Sbjct: 1 MDRDREFMALALEQARKSYEEGGVPVGAVMVENGKLIAAGHNQRVQNADPIAHGEMDCIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R V LY TL PC MCA AI I R+ G G E + Sbjct: 61 KAGRRA---RYDTVTLYTTLSPCMMCAGAIVQFGIGRVVVGEDRNFKGNAEFLRE----- 112 Query: 121 TCHHSPEIYPGISEQR-SRQIIQDFFKER 148 H E+ + + R ++ F ER Sbjct: 113 ---HGVEVT--LLDDEGCRALMDTFIAER 136 >gi|241203539|ref|YP_002974635.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857429|gb|ACS55096.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 158 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 6/151 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ F+ A+ +++A + P G+V V + ++I RA N D+T HAE+ ++ Sbjct: 1 MENHEPFLREAIALSKSAMANGDEPFGSVLVKDGEVILRAENSVFTGHDMTNHAEMNLVK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTL 119 + + L LY + EPC MC+ AI + I R+ + S + G I G + Sbjct: 61 LAAQHYDTAFLAGCTLYTSTEPCAMCSGAIYWSGIGRMVFACSETRLGEIAGIGLNVPSR 120 Query: 120 ATCHHSPEIYPGI-----SEQRSRQIIQDFF 145 A I + E + ++ QDF+ Sbjct: 121 AVLQTGARIVTVVGPDPKLEDEAAEVHQDFW 151 >gi|316971587|gb|EFV55344.1| tRNA-specific adenosine deaminase 2 [Trichinella spiralis] Length = 311 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 10/154 (6%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M A A+ A E+PVG V + N II R NR K+ HAE+ A Sbjct: 1 MLSEEKCFEEAFTLARKALSIGEVPVGCVLLYENVIIGRGHNRVNFYKNACRHAEMEAFD 60 Query: 61 MGCRILS------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 ++ + L+VT EPC MCAA I +++R+ YG N + GG + Sbjct: 61 EAFLWCKANCFSFNDVFLKTTLFVTCEPCMMCAALICKMQLKRVVYGCPNDRFGGFGSVL 120 Query: 115 QFYTLATCHHSP--EIYPGISEQRSRQIIQDFFK 146 T H+ EI + S +++Q F++ Sbjct: 121 DVKE--TFGHTFPSEIVANYRKDESVKLLQIFYE 152 >gi|255076837|ref|XP_002502085.1| predicted protein [Micromonas sp. RCC299] gi|226517350|gb|ACO63343.1| predicted protein [Micromonas sp. RCC299] Length = 193 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 71/170 (41%), Gaps = 33/170 (19%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M ALEEA+ A R E+PVG V V + ++++ NR E ++ T HAE A+ Sbjct: 1 MRVALEEAEGALARWEVPVGCVVVRDGEVVASGSNRTNEKRNGTRHAEFEAVDELLARHG 60 Query: 68 QEI----LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL---- 119 + LYVT+EPC MCA A+SL R+ YG N K GG + + Sbjct: 61 GDAVAAGFDRCSLYVTVEPCIMCAGALSLLGFERVTYGCGNDKFGGNGSILSIHDDGCAP 120 Query: 120 ------------------------ATCHHSPEIYPGISEQRSRQIIQDFF 145 + P + G+ + + ++QDF+ Sbjct: 121 CVEEPASSSKSHAGSDGKVSNDDARAANTYPSV-GGLFAEEAIALLQDFY 169 >gi|302346851|ref|YP_003815149.1| guanine deaminase [Prevotella melaninogenica ATCC 25845] gi|302150909|gb|ADK97170.1| guanine deaminase [Prevotella melaninogenica ATCC 25845] Length = 155 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 10/150 (6%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K + M A+E + ++ P GAV N +II+ N D TAHAE+ IR Sbjct: 1 MTKEEL-MRRAIELSADSVRNGGGPFGAVIARNGEIIAEGSNGVTIYNDPTAHAEVSTIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY--- 117 C+ L+ L ++Y + EPC MC AI A + ++YY I F Sbjct: 60 KACQKLNTFDLSGCEIYTSCEPCPMCFGAIYWAHLDKIYYANDRKDAADIGFDDDFIYQE 119 Query: 118 --TLATCHHSP-EIYPGISEQRSRQIIQDF 144 P EI + + ++ + + Sbjct: 120 IAVQPQYRKKPSEI---LLRNEALEVFKQW 146 >gi|291326525|ref|ZP_06124898.2| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131] gi|291314071|gb|EFE54524.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131] Length = 169 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 4/147 (2%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM+ AL A +AA P GAV V NN+++ N D T HAE+ IR C Sbjct: 20 DIQFMTQALALATDAAKNGNEPFGAVLVKNNQVVMTGENHIHTESDPTYHAELGLIRQYC 79 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATC 122 L + LY + EPC MC+ A+ +++ R+ Y S + + Sbjct: 80 SEHKVMDLSDYTLYTSCEPCCMCSGAMVWSQLGRMVYSLSHDELAEIAGFNIMLGSDEIF 139 Query: 123 ---HHSPEIYPGISEQRSRQIIQDFFK 146 PE+ G+ ++++ I +FK Sbjct: 140 AKSPFKPEVVKGVLKEQAISIYTQYFK 166 >gi|288905614|ref|YP_003430836.1| guanine deaminase [Streptococcus gallolyticus UCN34] gi|288732340|emb|CBI13910.1| putative guanine deaminase [Streptococcus gallolyticus UCN34] Length = 154 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 26/155 (16%) Query: 5 NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A++EA + + + P G+V V N +I++ N D TAH E+ AIR Sbjct: 3 EDYMQKAIQEAYDGIKKGDGGPFGSVIVKNGEIVASGHNMVLAHHDPTAHGEVTAIRKAG 62 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--------------NPKGGG 109 L L L+ T EPC MC AA A I ++YYG + + GG Sbjct: 63 EKLGTHDLSGTTLFTTGEPCPMCLAACLWANIDKVYYGCTIADNAMIGFRDQRFDELMGG 122 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 +N + Y L +H ++ +D+ Sbjct: 123 RKNLPKDY-LVQLNH----------DECLKLFKDY 146 >gi|323343460|ref|ZP_08083687.1| guanine deaminase [Prevotella oralis ATCC 33269] gi|323095279|gb|EFZ37853.1| guanine deaminase [Prevotella oralis ATCC 33269] Length = 156 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 52/116 (44%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K M A+ ++ + P GAV N +II+ A NR D TAHAE+ AIR Sbjct: 1 MMKQTDLMRRAIALSEQSVRNGGGPFGAVVARNGEIIAEASNRVTIDHDPTAHAEVNAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 R L L D+Y + EPC MC AI A + R+YY I F Sbjct: 61 KAARELDTFDLSGCDIYTSCEPCPMCLGAIYWAHLNRIYYANDRKDAARIGFDDDF 116 >gi|322436459|ref|YP_004218671.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp. MP5ACTX9] gi|321164186|gb|ADW69891.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp. MP5ACTX9] Length = 160 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 1/116 (0%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A++ A L P GAV V ++I+ N D TAHAE+ AIR Sbjct: 6 DHDKFMQQAIDLATQNVLSGRGGPFGAVIVRAGEVIATGINLVTATNDPTAHAEVTAIRN 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 C LS L LY + EPC MC AI +RI LY+G++ F+ Sbjct: 66 ACAHLSTFELRGATLYSSCEPCPMCLTAILWSRIDTLYFGSTATDAAEAGFDDSFF 121 >gi|261407450|ref|YP_003243691.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus sp. Y412MC10] gi|261283913|gb|ACX65884.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus sp. Y412MC10] Length = 159 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 1/119 (0%) Query: 3 KGNVFMSCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A+ EA P GA+ V + ++I R N L D TAHAE+ AIR Sbjct: 5 NHEYWMHQAIAEAHRNVQHVEGGPFGAIVVKDGQVIGRGRNLVTALNDPTAHAEVQAIRE 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C L L +Y + EPC MC AI +R +YY ++ I F Sbjct: 65 ACLHLEDFQLKGCTIYTSCEPCPMCLGAIYWSRPDAVYYASTKQDAAEIGFDDHFIYDE 123 >gi|325283258|ref|YP_004255799.1| tRNA(Ile)-lysidine synthase [Deinococcus proteolyticus MRP] gi|324315067|gb|ADY26182.1| tRNA(Ile)-lysidine synthase [Deinococcus proteolyticus MRP] Length = 529 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 2/128 (1%) Query: 23 EIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGA V ++ NR+RE D+T HAE+ A+R L L L VTLE Sbjct: 400 EVPVGAAVLDPAGAVVGLGRNRSRERGDMTRHAELEALRQAASALGTPYLSGCTLAVTLE 459 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC A AR+ R+ YGA+NP+ G + P++ G ++ Sbjct: 460 PCPMCLGAALEARVGRIVYGAANPRAGALGGVHDLLGH-RWGVRPQVQGGYRAGECAGLL 518 Query: 142 QDFFKERR 149 + F E R Sbjct: 519 KKAFAEFR 526 >gi|255530772|ref|YP_003091144.1| zinc-binding CMP/dCMP deaminase [Pedobacter heparinus DSM 2366] gi|255343756|gb|ACU03082.1| CMP/dCMP deaminase zinc-binding [Pedobacter heparinus DSM 2366] Length = 160 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 4/140 (2%) Query: 2 KKGNVFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM A++ ++ P GAV V N K+I+++ N+ D TAHAE+ AIR Sbjct: 5 DQHEKFMKMAIQLSEENVLDTVGGPFGAVIVKNGKVIAKSANKVTSTNDPTAHAEVSAIR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118 M C+ L L +Y + EPC MC +AI A+I +Y+ + I +F Sbjct: 65 MACKKLKTFDLSGCTVYTSCEPCPMCLSAIYWAKIDAIYFANTKDDAANIGFSDKFIYDE 124 Query: 119 -LATCHHSPEIYPGISEQRS 137 + H + + Sbjct: 125 LDKSMHKRKLPIKQMMRDEA 144 >gi|307151761|ref|YP_003887145.1| Guanine deaminase [Cyanothece sp. PCC 7822] gi|306981989|gb|ADN13870.1| Guanine deaminase [Cyanothece sp. PCC 7822] Length = 158 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 8/149 (5%) Query: 1 MKK-GNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + FM+ A+ + P GAV V +KII++ N+ D TAHAE++A Sbjct: 1 MSDIHHQFMAEAIALSFEGMRLGKGGPFGAVIVKEHKIIAKGYNQVTSTNDPTAHAEVVA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 IR C++L L +LY + EPC MC AAI A + ++YY + I F Sbjct: 61 IRQACQLLQTFELKGCELYTSCEPCPMCLAAIYWASVDKVYYANTKVDAAQIGFDDNFID 120 Query: 119 LA---TCHHSPEIYPGISEQRSRQIIQDF 144 + + + + ++ F Sbjct: 121 QEIKLPINKRKMPMIQLRQDEA---LKAF 146 >gi|288803845|ref|ZP_06409271.1| guanine deaminase [Prevotella melaninogenica D18] gi|288333679|gb|EFC72128.1| guanine deaminase [Prevotella melaninogenica D18] Length = 155 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 10/150 (6%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K + M A+E + ++ P GAV N +II+ N D TAHAE+ IR Sbjct: 1 MTKEEL-MRRAIELSADSVRNGGGPFGAVIARNGEIIAEGSNGVTIYNDPTAHAEVSTIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY--- 117 C+ L+ L ++Y + EPC MC AI A + ++YY I F Sbjct: 60 KACQKLNTFDLSGCEIYTSCEPCPMCFGAIYWAHLDKIYYANDRKDAADIGFDDDFIYQE 119 Query: 118 --TLATCHHSP-EIYPGISEQRSRQIIQDF 144 P EI + + ++ + + Sbjct: 120 IAVQPQYRKKPSEI---LLRNEALEVFKQW 146 >gi|329928171|ref|ZP_08282117.1| guanine deaminase [Paenibacillus sp. HGF5] gi|328938048|gb|EGG34447.1| guanine deaminase [Paenibacillus sp. HGF5] Length = 188 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 1/119 (0%) Query: 3 KGNVFMSCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A+ EA P GA+ V + ++I R N L D TAHAE+ AIR Sbjct: 34 NHEYWMHQAIAEAHRNVQHVEGGPFGAIVVKDGQVIGRGRNLVTALNDPTAHAEVQAIRE 93 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C L L +Y + EPC MC AI +R +YY ++ I F Sbjct: 94 ACLHLEDFQLKGCTIYTSCEPCPMCLGAIYWSRPDAVYYASTKQDAAEIGFDDHFIYDE 152 >gi|159906167|ref|YP_001549829.1| CMP/dCMP deaminase zinc-binding [Methanococcus maripaludis C6] gi|159887660|gb|ABX02597.1| CMP/dCMP deaminase zinc-binding [Methanococcus maripaludis C6] Length = 145 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 10/141 (7%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA+ IP+GAV V NKII R NR + HAE+ A+ R L Sbjct: 4 FMEEAIKEAKLGLEEGGIPIGAVLVYKNKIIGRGHNRRVQTNSAILHAEMDALENAGR-L 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + +I +LY TL PC MC+ A+ L +I+++ G + G S Sbjct: 63 TSDIYKNCELYTTLSPCIMCSGAVLLYKIKKVVIGENKTFLGA----EDLLIKNGV--SV 116 Query: 127 EIYPGISEQRSRQIIQDFFKE 147 E+ ++++R ++++DF K Sbjct: 117 EV---LNDERCVKMMEDFIKN 134 >gi|198276275|ref|ZP_03208806.1| hypothetical protein BACPLE_02467 [Bacteroides plebeius DSM 17135] gi|198270717|gb|EDY94987.1| hypothetical protein BACPLE_02467 [Bacteroides plebeius DSM 17135] Length = 155 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 1/116 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K + M A+E + P GAV + +I++ NR D TAHAE+ AIR Sbjct: 1 MTKEEL-MRKAIELSVKNVAEGGGPFGAVIAKDGEIVATGVNRVTPDCDPTAHAEVSAIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + L L ++Y + EPC MC AI A + R+YYG + I F Sbjct: 60 AAAKKLGTFDLSGCEIYTSCEPCPMCLGAIYWAHLDRMYYGNNKHDAAAIGFDDAF 115 >gi|299770668|ref|YP_003732694.1| guanine deaminase (Guanase) (guanine aminase) (guanine aminohydrolase) (GAH) (GDEase) [Acinetobacter sp. DR1] gi|298700756|gb|ADI91321.1| guanine deaminase (Guanase) (guanine aminase) (guanine aminohydrolase) (GAH) (GDEase) [Acinetobacter sp. DR1] Length = 160 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 43/107 (40%), Positives = 58/107 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+KG F+ A+E A N + P GAV V N ++I+ N+ D TAHAE+LAIR Sbjct: 1 MEKGEQFLRNAIELAYNNIEKGGRPFGAVVVKNGEVIASGVNQILTTNDPTAHAELLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 +IL L +Y + PC MC AA+ LA I+ + Y SN G Sbjct: 61 AASQILGSANLEGCSVYASGHPCPMCMAAMRLAGIKSVSYAYSNEDG 107 >gi|256080810|ref|XP_002576669.1| cytidine/deoxycytidylate deaminase-related [Schistosoma mansoni] gi|238661948|emb|CAZ32906.1| cytidine/deoxycytidylate deaminase-related [Schistosoma mansoni] Length = 165 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR---MGCR 64 M A E A A NE+PVG V N ++I+ N +D T HAE++ IR CR Sbjct: 1 MDIAFELACEALRCNEVPVGCAFVYNGEVIASGRNEVNATRDATQHAEMVTIRRLEQWCR 60 Query: 65 ILSQE---ILPEVDLYVTLEPCTMCAAAISL---ARIRRLYYGASNPKGGGIENGTQFYT 118 +E IL E DL+VT+EPC MCAAAI A ++ + YGA N + GG + + Sbjct: 61 NNQKELDKILVECDLFVTVEPCIMCAAAIRFCLPAHLKSITYGARNERFGGCGSVLSVHN 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + G+ + + ++++ F+ + Sbjct: 121 SPSAVAPLNCISGVEAEAAVELLKKFYAQ 149 >gi|325121723|gb|ADY81246.1| guanine deaminase (Guanase) [Acinetobacter calcoaceticus PHEA-2] Length = 145 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 43/107 (40%), Positives = 58/107 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+KG F+ A+E A N + P GAV V N +II+ N+ D TAHAE+LAIR Sbjct: 1 MEKGEQFLRKAIELAYNNIEKGGRPFGAVVVKNGEIIASGVNQILVTNDPTAHAELLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 ++L L +Y + PC MC AA+ LA I+ + Y SN G Sbjct: 61 AASQVLGSANLEGCSVYASGHPCPMCMAAMRLAGIKSVSYAYSNEDG 107 >gi|311085993|gb|ADP66075.1| hypothetical protein CWO_01335 [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] Length = 130 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 59/102 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +K +M AL+ A A + EIP+GA+ V +II N + D TAHAEI+A+R Sbjct: 4 EKDKNWMKIALKYAYYAKEKGEIPIGAILVFKERIIGIGWNSSISKNDPTAHAEIIALRG 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + + L LYVTL+PC MC AI +RI+RL +GA+ Sbjct: 64 AGKKIKNYRLLNTTLYVTLQPCIMCCGAIIQSRIKRLVFGAN 105 >gi|326800631|ref|YP_004318450.1| Guanine deaminase [Sphingobacterium sp. 21] gi|326551395|gb|ADZ79780.1| Guanine deaminase [Sphingobacterium sp. 21] Length = 160 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 1/103 (0%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 K +F+ A++ A +N P G + V + KII + N D TAHAEI+AIR Sbjct: 5 KDDIIFLKKAIDLAVTGVKQNKGGPFGCIIVKDGKIIGKGCNSVTSTIDPTAHAEIVAIR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 C+ L + L + LY + EPC MC AI AR R+ Y A+ Sbjct: 65 DACKHLGEYQLDDCTLYASCEPCPMCLGAIYWARPSRVVYAAT 107 >gi|53712925|ref|YP_098917.1| cytidine/deoxycytidylate deaminase [Bacteroides fragilis YCH46] gi|60681139|ref|YP_211283.1| putative nucleotide deaminase [Bacteroides fragilis NCTC 9343] gi|253563096|ref|ZP_04840553.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_2_5] gi|265763023|ref|ZP_06091591.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 2_1_16] gi|52215790|dbj|BAD48383.1| cytidine/deoxycytidylate deaminase [Bacteroides fragilis YCH46] gi|60492573|emb|CAH07345.1| putative nucleotide deaminase [Bacteroides fragilis NCTC 9343] gi|251946872|gb|EES87154.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_2_5] gi|263255631|gb|EEZ26977.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 2_1_16] gi|301162628|emb|CBW22175.1| putative nucleotide deaminase [Bacteroides fragilis 638R] Length = 155 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 1/120 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K + M A+E ++ P GAV + +I++ NR D TAHAE+ AIR Sbjct: 1 MTKEEL-MRKAIELSRENVANGGGPFGAVIAKDGEIVATGVNRVTASCDPTAHAEVSAIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L ++Y + EPC MC AI AR+ ++YYG + I F Sbjct: 60 AAASKLGTFNLSGYEIYTSCEPCPMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYDE 119 >gi|224540782|ref|ZP_03681321.1| hypothetical protein BACCELL_05696 [Bacteroides cellulosilyticus DSM 14838] gi|224517611|gb|EEF86716.1| hypothetical protein BACCELL_05696 [Bacteroides cellulosilyticus DSM 14838] Length = 155 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 39/120 (32%), Positives = 53/120 (44%), Gaps = 1/120 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K + M A+E + P GAV + +II+ NR D TAHAE+ AIR Sbjct: 1 MTKEEL-MRKAIELSTENVANGGGPFGAVIAKDGEIIATGTNRVTSSCDPTAHAEVSAIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L ++Y + EPC MC AI AR+ ++YYG + I F Sbjct: 60 AAATSLGTFNLSGCEIYTSCEPCPMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYDE 119 >gi|150402044|ref|YP_001329338.1| CMP/dCMP deaminase zinc-binding [Methanococcus maripaludis C7] gi|150033074|gb|ABR65187.1| CMP/dCMP deaminase zinc-binding [Methanococcus maripaludis C7] Length = 145 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 10/141 (7%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A++EA+ IP+GAV V NKII R NR + HAE+ A+ R L Sbjct: 4 FMDEAIKEAKLGLKEGGIPIGAVLVYKNKIIGRGHNRRVQNNSAILHAEMDALENAGR-L 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + ++ +LY TL PC MC+ A+ L +I+++ G + G + Sbjct: 63 TSDVYRNCELYTTLSPCIMCSGAVLLYKIKKVVIGENKTFLGA----EDLLLKNGV--AV 116 Query: 127 EIYPGISEQRSRQIIQDFFKE 147 E+ ++++R ++++DF K Sbjct: 117 EV---LNDERCVKMMKDFIKN 134 >gi|17230776|ref|NP_487324.1| cytosine deaminase [Nostoc sp. PCC 7120] gi|17132379|dbj|BAB74983.1| cytosine deaminase [Nostoc sp. PCC 7120] Length = 143 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 12/140 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EA+ IP+G+V V + KI+ R N+ + +D HAEI +R R Sbjct: 2 DEFMQAAIQEAKQGRQEGGIPIGSVLVKDGKILGRGHNKRVQDRDPVTHAEIDCLRNAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 I LY TL PC +CA A+ I+++ G S G + H Sbjct: 62 I-GSYR--GTTLYSTLMPCYLCAGAVVQFGIKKVIVGESRTFPGAKDFMVS--------H 110 Query: 125 SPEIYPGISEQRSRQIIQDF 144 E+ ++ Q++ +F Sbjct: 111 GVEVID-LNLDECEQMMSEF 129 >gi|195056037|ref|XP_001994919.1| GH13454 [Drosophila grimshawi] gi|193892682|gb|EDV91548.1| GH13454 [Drosophila grimshawi] Length = 160 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 9/147 (6%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL EA+ A E+PVG V + ++K+I+R GN ++ T HAE + I Sbjct: 3 AFMEEALVEARRARDAGEVPVGCVFIHDDKVIARGGNEVNVHRNATRHAEFICIDATLAY 62 Query: 66 LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 ++ LP E+ + VT+EPC MC+AA+ ++ + YG N + GG ++ + Sbjct: 63 CREKRLPARQVFSEISVVVTVEPCIMCSAALHTLAVKEIIYGCENDRFGG-KSVIDVAAV 121 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146 I G+ + + ++++F+K Sbjct: 122 --VGQRINITGGVRAEEAMTLLKEFYK 146 >gi|307154712|ref|YP_003890096.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822] gi|306984940|gb|ADN16821.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822] Length = 147 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 12/145 (8%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 K + FM A+ EA+ IP+G+V V + +I+ R N+ + D HAEI +R Sbjct: 4 KIDHFMQAAIAEAKQGLQEGGIPIGSVLVKDGQIVGRGHNKRVQDNDPVTHAEIDCLRNA 63 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 RI + LY TL PC +CA A+ I+R+ G S G F Sbjct: 64 GRIGQ---YGDSILYSTLMPCYLCAGAVVQFGIKRVIAGESLTFAGA----KNFMES--- 113 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKE 147 H E+ + + +Q+++DF + Sbjct: 114 -HGVEVID-LDLEECKQLMKDFIAK 136 >gi|307109298|gb|EFN57536.1| hypothetical protein CHLNCDRAFT_20896 [Chlorella variabilis] Length = 156 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 47/161 (29%), Positives = 64/161 (39%), Gaps = 24/161 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIR 60 FM ALE+A+ A E+PVGAV V ++++ A N D TAHAE+L IR Sbjct: 6 DDDERFMRLALEQARLAFDDGEVPVGAVLVSGGGQVLAAARNAAEGAADPTAHAELLCIR 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF---- 116 L + LYVTLEPC MCA A+ R + G Q Sbjct: 66 QAATAAGGWRLLDATLYVTLEPCPMCAGALLQVR-----------RAGLCSGVEQLQAAP 114 Query: 117 --------YTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + + G+ +++ FF RR Sbjct: 115 AAAAAVQPTRPHPFHPNMVVRRGVLAAECGDLMRSFFARRR 155 >gi|288925498|ref|ZP_06419431.1| guanine deaminase [Prevotella buccae D17] gi|315606630|ref|ZP_07881641.1| guanine deaminase [Prevotella buccae ATCC 33574] gi|288337714|gb|EFC76067.1| guanine deaminase [Prevotella buccae D17] gi|315251640|gb|EFU31618.1| guanine deaminase [Prevotella buccae ATCC 33574] Length = 155 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 60/150 (40%), Gaps = 13/150 (8%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K + M A+ ++ + P GAV N +I++ A N D TAHAE+ AIR Sbjct: 1 MDKKEL-MRRAIVLSEESVKHGGGPFGAVIARNGEIVAEASNSVTIDHDPTAHAEVNAIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF---- 116 L L ++Y + EPC MC AI A + ++YY I F Sbjct: 60 KATSKLQNFDLEGCEIYTSCEPCPMCLGAIYWAHLDKIYYANDRKDAAKIGFDDDFIYQE 119 Query: 117 --YTLATCHHSPEIYPGISEQRSRQIIQDF 144 A H EI + + ++ F Sbjct: 120 IGLKPADRHKPMEI---LLRDEA---LKAF 143 >gi|50305461|ref|XP_452690.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641823|emb|CAH01541.1| KLLA0C10989p [Kluyveromyces lactis] Length = 238 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 6/151 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILA 58 M + + M A+ A+ A E PV + V + NK+I+ N E +HAE + Sbjct: 1 MSQDLLHMRTAITLAKYALDHEETPVACIFVHSKLNKVIAYGMNGTNESISGISHAEFMG 60 Query: 59 IRMGCRILSQE--ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 I+ + IL EV LYVT+EPC MCA+A+ I+++ +G N + GG + Sbjct: 61 IKQIQEKYGTDPKILSEVVLYVTVEPCIMCASALKQLGIKKVVFGCGNERFGGNGSILCI 120 Query: 117 YTLATCH--HSPEIYPGISEQRSRQIIQDFF 145 + + + + PG+ + + +++ F+ Sbjct: 121 HNDTSTNKSNKYVSIPGVLRREAIMLLRYFY 151 >gi|296329638|ref|ZP_06872123.1| guanine deaminase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674035|ref|YP_003865707.1| guanine deaminase [Bacillus subtilis subsp. spizizenii str. W23] gi|296153136|gb|EFG94000.1| guanine deaminase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412279|gb|ADM37398.1| guanine deaminase [Bacillus subtilis subsp. spizizenii str. W23] Length = 156 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 1/115 (0%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ A++ A++ P GA+ V + II+ N D TAHAE+ AIR Sbjct: 2 NHETFLKRAVDLARDGVNAGVGGPFGALIVKDGSIIAEGQNNVTTSNDPTAHAEVTAIRN 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 C+ L L + LY + EPC MC AI AR + +YY A + F Sbjct: 62 ACKALGTFQLDDCILYTSCEPCPMCLGAIYWARPKAVYYAAEHTDAAEAGFDDSF 116 >gi|307565561|ref|ZP_07628041.1| guanine deaminase [Prevotella amnii CRIS 21A-A] gi|307345720|gb|EFN91077.1| guanine deaminase [Prevotella amnii CRIS 21A-A] Length = 155 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 44/143 (30%), Positives = 62/143 (43%), Gaps = 6/143 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K + M A+E + N+ P GAV N KII+ N+ D TAHAEI IR Sbjct: 1 MTKKEL-MLRAIELSINSVRNGGGPFGAVISHNGKIIAEGSNKVTINNDPTAHAEISTIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + C L L ++Y + EPC MC AI A + ++YY I F Sbjct: 60 IACEKLKTFNLSGCEIYTSCEPCPMCLGAIYWAHLDKIYYANDRKDAAKIGFDDDFIYQE 119 Query: 121 TCHHSPEIYPGISEQRSRQIIQD 143 E+ P ++ S ++Q Sbjct: 120 -----IEVEPQYRKKPSEILLQS 137 >gi|288929191|ref|ZP_06423036.1| guanine deaminase [Prevotella sp. oral taxon 317 str. F0108] gi|288329293|gb|EFC67879.1| guanine deaminase [Prevotella sp. oral taxon 317 str. F0108] Length = 155 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 37/118 (31%), Positives = 50/118 (42%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 M A+ ++ + P GAV +II+ A NR D TAHAE+ AIR+ Sbjct: 2 NNEELMRRAIALSEESVKNGGGPFGAVIARKGEIIAEAANRVTLDHDPTAHAEVSAIRLA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L D+Y + EPC MC AI AR+ +YY + I F Sbjct: 62 SSKLGTFNLSGCDIYTSCEPCPMCLGAIYWARLDNVYYANNREDAANIGFDDDFIYHE 119 >gi|291532926|emb|CBL06039.1| Cytosine/adenosine deaminases [Megamonas hypermegale ART12/1] Length = 157 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 44/117 (37%), Positives = 57/117 (48%), Gaps = 2/117 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M K FM A +EA + NE P GAV V + KI+ R NR D T HAE+ AI Sbjct: 1 MTK-EEFMLIATQEADSNLTTNEGGPFGAVIVKDGKIVGRGHNRVLIKHDPTCHAEVEAI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 R C+ L L +LY + PC MC +A A I+++YYG + I F Sbjct: 60 RDACQNLGTHDLTGCELYTSCYPCPMCLSATIWANIKKVYYGNTAKDADKIGFRDDF 116 >gi|218438113|ref|YP_002376442.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424] gi|218170841|gb|ACK69574.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424] Length = 147 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 12/140 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A+ EA+ IP+G+V V + KI+ R N+ + D HAEI +R R Sbjct: 6 DSFMQAAIAEARQGLQEGGIPIGSVLVKDGKILGRGHNKRVQDNDPVTHAEIDCLRNAGR 65 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + LY TL PC +CA A+ I+++ G S G E H Sbjct: 66 VGQ---YQDTILYSTLMPCYLCAGAVVQFGIKKVIAGESATFAGAREFMES--------H 114 Query: 125 SPEIYPGISEQRSRQIIQDF 144 E+ ++ +Q++QDF Sbjct: 115 GVEVID-LNLNECKQLMQDF 133 >gi|260593324|ref|ZP_05858782.1| guanine deaminase [Prevotella veroralis F0319] gi|260534736|gb|EEX17353.1| guanine deaminase [Prevotella veroralis F0319] Length = 155 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 39/143 (27%), Positives = 60/143 (41%), Gaps = 6/143 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K + M A+E + + P GA+ +II+ N D TAHAE+ AIR Sbjct: 1 MTKEEL-MRKAIELSIESVRNGGGPFGAIIARKGEIIAEGSNGVTIYNDPTAHAEVTAIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C L L ++Y + EPC MC AI A + ++YY I F Sbjct: 60 KACEKLGTFDLTGCEIYTSCEPCPMCLGAIYWAHLDKIYYANDRKDAADIGFDDDFIYQE 119 Query: 121 TCHHSPEIYPGISEQRSRQIIQD 143 E+ P ++ S ++++ Sbjct: 120 -----IEVKPQYRKKPSEILMRE 137 >gi|260555502|ref|ZP_05827723.1| guanine deaminase [Acinetobacter baumannii ATCC 19606] gi|260412044|gb|EEX05341.1| guanine deaminase [Acinetobacter baumannii ATCC 19606] Length = 160 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 1/120 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK F+ A+E A N + P GAV V + K+I+ N+ D TAHAE+LAIR Sbjct: 1 MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFYTL 119 ++L L ++ + PC MC AA+ LA I+ + Y SN G + + Y Sbjct: 61 AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDGAPFGLSTAEIYAD 120 >gi|169633781|ref|YP_001707517.1| guanine deaminase (Guanase) (guanine aminase) (guanine aminohydrolase) (GAH) (GDEase) [Acinetobacter baumannii SDF] gi|169152573|emb|CAP01555.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) [Acinetobacter baumannii] Length = 160 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 1/120 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK F+ A+E A N + P GAV V + K+I+ N+ D TAHAE+LAIR Sbjct: 1 MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFYTL 119 ++L L ++ + PC MC AA+ LA I+ + Y SN G + + Y Sbjct: 61 AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDGAPFGLSTAEIYAD 120 >gi|325978643|ref|YP_004288359.1| guanine deaminase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178571|emb|CBZ48615.1| guanine deaminase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 154 Score = 147 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 26/155 (16%) Query: 5 NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A++EA + + + P G+V V + +II+ N D TAH E+ AIR Sbjct: 3 EDYMQKAIQEAYDGIKKGDGGPFGSVIVKDGEIIASGHNMVLAHHDPTAHGEVTAIRKAG 62 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--------------NPKGGG 109 L L L+ T EPC MC AA A I ++YYG + + GG Sbjct: 63 EKLGTHDLSGTTLFTTGEPCPMCLAACLWANIDKIYYGCTIADNAMIGFRDQRFDELMGG 122 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 +N + Y L +H ++ +D+ Sbjct: 123 RKNLPKDY-LVQLNH----------DDCLKLFKDY 146 >gi|170032967|ref|XP_001844351.1| tRNA-specific adenosine deaminase subunit TAD2 [Culex quinquefasciatus] gi|167873308|gb|EDS36691.1| tRNA-specific adenosine deaminase subunit TAD2 [Culex quinquefasciatus] Length = 165 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 7/149 (4%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + FM ALE+A+ A E+PVG V V ++II+ NR E K+ T H E L I Sbjct: 2 DRFMEQALEQARLAEQLKEVPVGCVFVRGQDEIIANGCNRVNETKNATRHVEFLCIDQSL 61 Query: 64 RILSQEILPEVDLY------VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 Q +P DL+ VT+EPC MCA A+ +R + YG N + GG Sbjct: 62 EYARQRDIPWEDLFREVTVVVTVEPCIMCAGALLQLGVREIIYGCGNDRFGGCGTVLDVP 121 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 L S I G+ + + Q++++F+K Sbjct: 122 GLLLEKGSLPIRGGVRAEEAMQLLREFYK 150 >gi|195391484|ref|XP_002054390.1| GJ24425 [Drosophila virilis] gi|194152476|gb|EDW67910.1| GJ24425 [Drosophila virilis] Length = 160 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 9/147 (6%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL EA+ A E+PVG V V N+K+I+R GN ++ T HAE + I Sbjct: 3 AFMEDALVEARRARDAGEVPVGCVFVHNDKVIARGGNEVNVHRNATRHAEFICIDATLAY 62 Query: 66 LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 ++ LP E+ + VT+EPC MC+AA+ ++ + YG N + GG T Sbjct: 63 CREKRLPARQVFSEISVVVTVEPCIMCSAALHTLAVKEIIYGCENDRFGG---KTVIDVA 119 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146 A I G+ + + ++++F+K Sbjct: 120 AVVGQRINITGGVRSEEAMALLKEFYK 146 >gi|325279197|ref|YP_004251739.1| Guanine deaminase [Odoribacter splanchnicus DSM 20712] gi|324311006|gb|ADY31559.1| Guanine deaminase [Odoribacter splanchnicus DSM 20712] Length = 156 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 39/113 (34%), Positives = 49/113 (43%), Gaps = 1/113 (0%) Query: 5 NVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM A+ A + P GAV V KII+ N D TAHAE+ AIR C Sbjct: 4 EKFMREAIRLAVENVKQGTGGPFGAVVVKEGKIIAACANTVTPDCDPTAHAEVNAIREAC 63 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 R L L ++Y + EPC MC AI AR R+YY ++ Sbjct: 64 RKLDTFQLGGCEIYASCEPCPMCLGAIYWARPSRVYYASTKEDAALAGFDDSL 116 >gi|320335249|ref|YP_004171960.1| Guanine deaminase [Deinococcus maricopensis DSM 21211] gi|319756538|gb|ADV68295.1| Guanine deaminase [Deinococcus maricopensis DSM 21211] Length = 155 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 54/121 (44%), Gaps = 1/121 (0%) Query: 8 MSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A A P GAV V + +II+R N D TAHAE+ AIR L Sbjct: 6 MQEAARLALENVTSGHGGPFGAVIVKDGEIIARGANNVTASNDPTAHAEVTAIRAAAAKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L + ++Y + EPC MC AI AR++R++YG + I QF Sbjct: 66 GRFDLSDCEIYTSCEPCPMCLGAIYWARLQRVHYGCTQADADAIGFSDQFIYQELDKPKA 125 Query: 127 E 127 E Sbjct: 126 E 126 >gi|223937372|ref|ZP_03629277.1| CMP/dCMP deaminase zinc-binding [bacterium Ellin514] gi|223893923|gb|EEF60379.1| CMP/dCMP deaminase zinc-binding [bacterium Ellin514] Length = 155 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 3/117 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M K +M A+ + R P GAV V N KI+ R N+ D TAHAE++AI Sbjct: 1 MNK--KYMQEAVRISIRMMRRGIGGPFGAVVVKNGKIVGRGCNQVTSTNDPTAHAEVVAI 58 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 R C+ L L + +LY + EPC MC +AI AR++++YYG + IE F Sbjct: 59 RDACKRLKTFQLDDCELYTSCEPCPMCLSAIYWARLKKVYYGNTRKDAAEIEFDDDF 115 >gi|81298931|ref|YP_399139.1| cytosine/adenosine deaminase-like [Synechococcus elongatus PCC 7942] gi|81167812|gb|ABB56152.1| Cytosine/adenosine deaminases-like [Synechococcus elongatus PCC 7942] Length = 161 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 2/103 (1%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM A+ ++ A L + P G V N +II+ N+ +D T HAEI AIR Sbjct: 5 EDERFMRRAIALSRQAGLIDCTGGPFGCVITRNGEIIAEGFNQVLTERDPTWHAEIAAIR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 C+ L L LY + EPC MCAAA+ A++ RL + Sbjct: 65 QACQHLQTVDLSGCTLYTSAEPCPMCAAAVYWAKLDRLVFATR 107 >gi|260909908|ref|ZP_05916596.1| guanine deaminase [Prevotella sp. oral taxon 472 str. F0295] gi|260635953|gb|EEX53955.1| guanine deaminase [Prevotella sp. oral taxon 472 str. F0295] Length = 155 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 1/116 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + M A+ ++ + P GAV N +I++ A NR D TAHAE+ AIR Sbjct: 1 MNNKEL-MRRAIALSEESVKNGGGPFGAVIARNGEIVAEAANRVTLDHDPTAHAEVSAIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + R L L D+Y + EPC MC AI A + +YY + I F Sbjct: 60 LASRKLGTFNLSGCDIYTSCEPCPMCLGAIYWAHLDNIYYANNREDAANIGFDDDF 115 >gi|75911133|ref|YP_325429.1| cytidine/deoxycytidylate deaminase [Anabaena variabilis ATCC 29413] gi|75704858|gb|ABA24534.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Anabaena variabilis ATCC 29413] Length = 143 Score = 146 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 12/143 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EA IP+G+V V + KI+ R N+ + +D HAEI +R R Sbjct: 2 DEFMQVAIQEATQGRQEGGIPIGSVLVKDGKILGRGHNKRVQDRDPVTHAEIDCLRNAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 I LY TL PC +CA A+ I+++ G S G + H Sbjct: 62 I-GSYR--GTTLYSTLMPCYLCAGAVVQFGIKKVIVGESRTFPGAKDFMVS--------H 110 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 E+ ++ Q++ +F + Sbjct: 111 GVEVID-LNLDECEQMMSEFIQA 132 >gi|186682609|ref|YP_001865805.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102] gi|186465061|gb|ACC80862.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102] Length = 141 Score = 146 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 8/142 (5%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL +A+ + P GAV V +N++++ A N D +AHAEI IR Sbjct: 4 EYFMRLALAQAK----EGDTPYGAVIVKDNEVVAVAHNTVSRDNDPSAHAEINVIRSLTA 59 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFY---TLA 120 L L +Y T EPC MCA A + + + YGAS I ++ +A Sbjct: 60 KLKNHFLEGYSIYTTCEPCPMCATACVWSGLSEIVYGASIQDLISINQSQINLSCEEVIA 119 Query: 121 TCHHSPEIYPGISEQRSRQIIQ 142 + ++ GI + ++ + Sbjct: 120 KSFRNIKVTKGILKNECLELFK 141 >gi|195443952|ref|XP_002069651.1| GK11635 [Drosophila willistoni] gi|194165736|gb|EDW80637.1| GK11635 [Drosophila willistoni] Length = 160 Score = 146 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 9/147 (6%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL EA+ A E+PVG V V +K+I+R GN ++ T HAE + I Sbjct: 3 AFMEDALVEARRARDAGEVPVGCVFVYGDKVIARGGNEVNVYRNATRHAEFICIDATLAY 62 Query: 66 LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 ++ LP E+ + VT+EPC MC+AA+ ++ + YG N + GG T Sbjct: 63 CREKHLPARQLFAEISVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVA 119 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146 A I G+ + ++++F+K Sbjct: 120 AVVGQRISIIGGVRGDEAMALLKEFYK 146 >gi|306831703|ref|ZP_07464860.1| guanine deaminase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426128|gb|EFM29243.1| guanine deaminase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 172 Score = 146 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 26/155 (16%) Query: 5 NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A++EA + + + P G+V V + +II+ N D TAH E+ AIR Sbjct: 21 EDYMQKAIQEAYDGIKKGDGGPFGSVIVKDGEIIASGHNMVLAHHDPTAHGEVTAIRKAG 80 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--------------NPKGGG 109 L L L+ T EPC MC AA A I ++YYG + + GG Sbjct: 81 EKLGTHDLSGTTLFTTGEPCPMCLAACLWANIDKIYYGCTIADNAMIGFRDQRFDELMGG 140 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 +N + Y L +H ++ +D+ Sbjct: 141 RKNLPKDY-LVQLNH----------DDCLKLFKDY 164 >gi|42521730|ref|NP_967110.1| cytidine/deoxycytidylate deaminase family protein [Bdellovibrio bacteriovorus HD100] gi|39574260|emb|CAE77764.1| cytidine/deoxycytidylate deaminase family protein [Bdellovibrio bacteriovorus HD100] Length = 155 Score = 146 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 44/121 (36%), Positives = 58/121 (47%), Gaps = 3/121 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M K FM A+E ++N P GAV V + KII N+ D TAHAE+ AI Sbjct: 1 MNK--EFMLRAIELSRNNMRAGAGGPFGAVIVKDGKIIGEGWNKVTSSNDPTAHAEVSAI 58 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R C +S L ++Y + EPC MC +AI ARI ++YYG + I F Sbjct: 59 RDACSKISNFELAGAEIYTSCEPCPMCLSAIYWARIEKIYYGNTRKDAAEINFDDDFLYQ 118 Query: 120 A 120 Sbjct: 119 E 119 >gi|258593876|emb|CBE70217.1| Cytosine deaminase (Cytosine aminohydrolase) [NC10 bacterium 'Dutch sediment'] Length = 154 Score = 146 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 14/148 (9%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + F+ A E+A+ + +P+GAV V N+ +I+ NR + D TAH E+ +R Sbjct: 6 ETHQRFIRAAFEQARKSYNEGGLPIGAVMVENSTVIAVGHNRRVQDGDPTAHGEMDCLRQ 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + + LY TL PC MC+ + I+R+ G G +E Sbjct: 66 AGR---RPRYDGITLYTTLSPCMMCSGTVLQFGIKRVVIGEKQNFPGNVELLR------- 115 Query: 122 CHHSPEIYPGISEQ-RSRQIIQDFFKER 148 +H ++ + + ++Q F +ER Sbjct: 116 -NHGVDVI--VLDDPECISLMQRFMRER 140 >gi|332874597|ref|ZP_08442498.1| putative guanine deaminase [Acinetobacter baumannii 6014059] gi|322507943|gb|ADX03397.1| guaD [Acinetobacter baumannii 1656-2] gi|323517535|gb|ADX91916.1| CMP/dCMP deaminase zinc-binding protein [Acinetobacter baumannii TCDC-AB0715] gi|332737235|gb|EGJ68161.1| putative guanine deaminase [Acinetobacter baumannii 6014059] Length = 160 Score = 146 bits (371), Expect = 8e-34, Method: Composition-based stats. Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 1/120 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK F+ A+E A N + P GAV V + K+I+ N+ D TAHAE+LAIR Sbjct: 1 MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFYTL 119 ++L L ++ + PC MC AA+ LA I+ + Y SN G + + Y Sbjct: 61 AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDGAPFGLSTAEIYAD 120 >gi|325298986|ref|YP_004258903.1| Guanine deaminase [Bacteroides salanitronis DSM 18170] gi|324318539|gb|ADY36430.1| Guanine deaminase [Bacteroides salanitronis DSM 18170] Length = 155 Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 45/127 (35%), Positives = 56/127 (44%), Gaps = 6/127 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K + M A+E + P GAV N +IIS NR D TAHAE+ AIR Sbjct: 1 MTKEEL-MRKAIELSVRNVAEGGGPFGAVIARNGEIISTGTNRVTPDHDPTAHAEVSAIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ---FY 117 CR L L ++Y + EPC MC AI A + R+YYG N K G Y Sbjct: 60 AACRELGTFDLSGCEIYTSCEPCPMCLGAIYWAHLDRMYYG--NDKHDAARIGFDDAFIY 117 Query: 118 TLATCHH 124 + Sbjct: 118 KELELNP 124 >gi|169796435|ref|YP_001714228.1| guanine deaminase (Guanase) (guanine aminase) (guanine aminohydrolase) (GAH) (GDEase) [Acinetobacter baumannii AYE] gi|213156454|ref|YP_002318874.1| guanine deaminase [Acinetobacter baumannii AB0057] gi|215483897|ref|YP_002326122.1| Guanine deaminase(Guanase) [Acinetobacter baumannii AB307-0294] gi|301347084|ref|ZP_07227825.1| Guanine deaminase(Guanase) [Acinetobacter baumannii AB056] gi|301512279|ref|ZP_07237516.1| Guanine deaminase(Guanase) [Acinetobacter baumannii AB058] gi|301596132|ref|ZP_07241140.1| Guanine deaminase(Guanase) [Acinetobacter baumannii AB059] gi|332854738|ref|ZP_08435516.1| putative guanine deaminase [Acinetobacter baumannii 6013150] gi|332865718|ref|ZP_08436528.1| putative guanine deaminase [Acinetobacter baumannii 6013113] gi|169149362|emb|CAM87246.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) [Acinetobacter baumannii AYE] gi|213055614|gb|ACJ40516.1| guanine deaminase [Acinetobacter baumannii AB0057] gi|213986575|gb|ACJ56874.1| Guanine deaminase(Guanase) [Acinetobacter baumannii AB307-0294] gi|332727824|gb|EGJ59227.1| putative guanine deaminase [Acinetobacter baumannii 6013150] gi|332735145|gb|EGJ66227.1| putative guanine deaminase [Acinetobacter baumannii 6013113] Length = 160 Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 1/120 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK F+ A+E A N + P GAV V + K+I+ N+ D TAHAE+LAIR Sbjct: 1 MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFYTL 119 ++L L ++ + PC MC AA+ LA I+ + Y SN G + + Y Sbjct: 61 TASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDGAPFGLSTAEIYAD 120 >gi|56751392|ref|YP_172093.1| hypothetical protein syc1383_d [Synechococcus elongatus PCC 6301] gi|56686351|dbj|BAD79573.1| hypothetical protein [Synechococcus elongatus PCC 6301] Length = 161 Score = 146 bits (370), Expect = 9e-34, Method: Composition-based stats. Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 2/103 (1%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM A+ ++ A L + P G V N +II+ N+ +D T HAEI AIR Sbjct: 5 EDERFMRRAIALSRQAGLIDCTGGPFGCVITRNGEIIAEGFNQVLTERDPTWHAEIAAIR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 C+ L L LY + EPC MCAAA+ A++ RL + Sbjct: 65 QACQHLQTVDLSGCTLYTSAEPCPMCAAAVYWAKLERLVFATR 107 >gi|209964980|ref|YP_002297895.1| guanine deaminase [Rhodospirillum centenum SW] gi|209958446|gb|ACI99082.1| guanine deaminase [Rhodospirillum centenum SW] Length = 158 Score = 146 bits (370), Expect = 9e-34, Method: Composition-based stats. Identities = 44/135 (32%), Positives = 59/135 (43%), Gaps = 11/135 (8%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +F+ A E A++ P GAV VL+ ++ NR D TAHAEI+AIR Sbjct: 4 QDALFLRRAAELARHGMDAGAGGPFGAVIVLDGTVVGEGWNRVTSSNDPTAHAEIVAIRE 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA- 120 C L + L +Y + EPC MC AAI AR+ RL Y + + I Sbjct: 64 ACARLGRFDLRGATVYSSCEPCPMCLAAIHWARLDRLVYANTRDEAAAIGFDDALIYDQI 123 Query: 121 ---------TCHHSP 126 CHH P Sbjct: 124 PLPPAQRRLPCHHHP 138 >gi|194476730|ref|YP_002048909.1| cytidine/deoxycytidylate deaminase family protein [Paulinella chromatophora] gi|171191737|gb|ACB42699.1| cytidine/deoxycytidylate deaminase family protein [Paulinella chromatophora] Length = 157 Score = 146 bits (370), Expect = 9e-34, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 1/150 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59 + +MS L ++P+ AV + + + N + +D HAE++A+ Sbjct: 6 LDTYRYWMSRLLRCVSRMKTDCDVPIAAVILNGAGQCVGWGRNSREKNQDPMGHAELIAL 65 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R + + L VTLEPC MCA A+ AR++ + YG+ + K G + Sbjct: 66 RQAAVLRGSWRFDDCTLIVTLEPCPMCAGALVQARMKFVVYGSYDYKRGALGGTVDLSNH 125 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A+ HH + G+ + ++++ +F+ RR Sbjct: 126 ASAHHYMKTKGGLEGTLASEVLETWFRRRR 155 >gi|116250294|ref|YP_766132.1| purine deaminase [Rhizobium leguminosarum bv. viciae 3841] gi|115254942|emb|CAK06016.1| putative purine deaminase [Rhizobium leguminosarum bv. viciae 3841] Length = 156 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 4/149 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ F+ A+ +++A + P G++ V + ++I RA N D+T HAE+ ++ Sbjct: 1 MENHEPFLREAIALSRSAVENGDEPFGSLLVKDGEVILRAENSVFTGHDMTNHAEMNLVK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTL 119 + + L + LY + EPC MC+ AI + I R+ + S + G I G + Sbjct: 61 LAAQHYDTAFLADCTLYTSTEPCAMCSGAIYWSGIGRMVFACSEARLGEIAGIGLNVPSR 120 Query: 120 ATCH---HSPEIYPGISEQRSRQIIQDFF 145 A + E + + Q+F+ Sbjct: 121 AVLQTGARIVTVVGPNLEDEAAAVHQEFW 149 >gi|167041893|gb|ABZ06633.1| putative cytidine and deoxycytidylate deaminase zinc-binding region [uncultured marine microorganism HF4000_133G03] Length = 149 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 6/140 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M+ A+E + + P G+V V + KII+ N+ D TAH EI+AIR C+ L+ Sbjct: 1 MTRAIELSIESVNTGGGPFGSVIVKDEKIIAEGFNKVTSTNDPTAHGEIVAIRKACKSLN 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC-HHSP 126 L +LY T EPC MC +AI A I ++YY + I+ + Sbjct: 61 NFNLSGCELYSTCEPCPMCLSAIYWAHIDKVYYANTRDDAKKIDFDDSLIYSELLKNVKI 120 Query: 127 EIYP--GISEQRSRQIIQDF 144 P + + + ++ F Sbjct: 121 RKIPMAQMMREEA---LKAF 137 >gi|291515557|emb|CBK64767.1| Cytosine/adenosine deaminases [Alistipes shahii WAL 8301] Length = 148 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 76/148 (51%), Gaps = 5/148 (3%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL EAQ A + E+P+GAV V +I R N L D TAHAE+ A+ Sbjct: 5 ETDEKFMRLALNEAQKALKQQEVPIGAVVVAGGAVIGRGHNLVETLADPTAHAEMQALTA 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L + L E LYVT+EPC MCA AI A++ R+ +GA +PK G + Y+ A Sbjct: 65 AAATLGGKYLQECTLYVTVEPCIMCAGAIGWAQVSRVVWGADDPKKG-----FRRYSEAV 119 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 H + G+ + +++ FF R Sbjct: 120 FHPRTTVARGVLREECEELMSGFFAGLR 147 >gi|119509403|ref|ZP_01628552.1| cytosine deaminase [Nodularia spumigena CCY9414] gi|119466017|gb|EAW46905.1| cytosine deaminase [Nodularia spumigena CCY9414] Length = 143 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 12/140 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A+ +A+ IP+G+V V + KII R N+ + D HAEI +R R Sbjct: 2 DEFMEAAIAQAKQGRKEGGIPIGSVLVKDGKIIGRGHNKRVQDNDPVTHAEIDCLRNAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + LY TL PC +CA A+ I+++ G S G + H Sbjct: 62 V-GSYR--GTTLYSTLMPCYLCAGAVVQFGIKKVIAGESRTFPGAKDFMVS--------H 110 Query: 125 SPEIYPGISEQRSRQIIQDF 144 E+ ++ Q++ +F Sbjct: 111 GVEVID-LNLDECEQMMSEF 129 >gi|194334351|ref|YP_002016211.1| CMP/dCMP deaminase [Prosthecochloris aestuarii DSM 271] gi|194312169|gb|ACF46564.1| CMP/dCMP deaminase zinc-binding [Prosthecochloris aestuarii DSM 271] Length = 155 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 52/114 (45%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ AL A P GA+ V N ++++ NR D T+HAE+ AIR + L Sbjct: 6 FLDRALALAVENVAAGGGPFGALIVRNGEVVATGVNRVTRENDPTSHAEVNAIRAASQKL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L +LY + EPC MC AI A + +YYGA + + ++ Sbjct: 66 KTFKLEGCELYSSCEPCPMCMGAIYWAGVTTVYYGADSDEAAVAGFDDRYIYDE 119 >gi|193076995|gb|ABO11743.2| CMP/dCMP deaminase zinc-binding [Acinetobacter baumannii ATCC 17978] Length = 160 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 1/120 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK F+ A+E A N + P GAV V + K+I+ N+ D TAHAE+LAIR Sbjct: 1 MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFYTL 119 + ++L L ++ + PC MC AA+ LA I+ + Y SN G + + Y Sbjct: 61 VASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDGAPFGLSTAEIYAD 120 >gi|282880633|ref|ZP_06289339.1| guanine deaminase [Prevotella timonensis CRIS 5C-B1] gi|281305528|gb|EFA97582.1| guanine deaminase [Prevotella timonensis CRIS 5C-B1] Length = 156 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 10/145 (6%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + ++ M A+ ++ + L P GAV II+ A N D TAHAE+ AIR Sbjct: 2 MNQKDI-MRRAIALSEESVLSGGGPFGAVIAKGGNIIAEASNTVTIDHDPTAHAEVNAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF---- 116 + L L D+Y + EPC MC AI A + R++Y + I F Sbjct: 61 KATQKLGTFDLTGCDIYTSCEPCPMCLGAIYWAHLDRIFYANNRKDAARIGFDDDFIYQE 120 Query: 117 --YTLATCHHSPEIYPGISEQRSRQ 139 + A H + + +R+ Sbjct: 121 IALSPAERHKQMRV---LLPDEARK 142 >gi|186686613|ref|YP_001869809.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102] gi|186469065|gb|ACC84866.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102] Length = 143 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 12/140 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EA+ IP+G+V V + KI+ R N+ + D HAEI +R R Sbjct: 2 DEFMEAAIQEAKQGREEGGIPIGSVLVKDGKILGRGHNKRVQDGDPVTHAEIDCLRNAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + LY TL PC +CA A+ I+++ G S G E H Sbjct: 62 V-GSYR--GTTLYSTLMPCYLCAGAVVQFGIKKVIVGESQTFPGAKEFMVS--------H 110 Query: 125 SPEIYPGISEQRSRQIIQDF 144 E+ ++ Q++ +F Sbjct: 111 GVEVID-LNLDDCEQMMSEF 129 >gi|156087547|ref|XP_001611180.1| cytosine deaminase [Babesia bovis T2Bo] gi|154798434|gb|EDO07612.1| cytosine deaminase, putative [Babesia bovis] Length = 191 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 20/159 (12%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIR-- 60 + FM+ AL+EA++A R E+ VG V V K I++RAGN + + T H E AI Sbjct: 8 DNFMTAALDEARDALERGEVAVGCVIVDKEKKTIVARAGNSTNQKHNSTWHCEFGAIDTL 67 Query: 61 -------------MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 L+VT EPC MCA A+ + + +YYG N K Sbjct: 68 FSLVPDGKIGANDQANIQAFTSRYA---LFVTCEPCIMCATALHIVGLTDIYYGCDNEKF 124 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 GG + + + GI + + Q++Q F+ Sbjct: 125 GGCGSVLSLHEGYGDFPPLNCHKGIRAEEAIQLLQTFYA 163 >gi|254520799|ref|ZP_05132855.1| CMP/dCMP deaminase [Clostridium sp. 7_2_43FAA] gi|226914548|gb|EEH99749.1| CMP/dCMP deaminase [Clostridium sp. 7_2_43FAA] Length = 147 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 31/158 (19%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKI---------------ISRAGNRNRELKDVT 51 +M A+ EA+NA I I+ N +LK T Sbjct: 3 YMDLAINEAKNAY---------------NIGEVPVGVVVVKDGEVIASQHNLKEKLKLTT 47 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 AHAEILAI C+ L+ L ++YVTLEPC MCAAAI+ +RI RL+ G N G Sbjct: 48 AHAEILAIEEACKKLNNWRLSGCEMYVTLEPCPMCAAAIAQSRISRLFIGTFNKDMGACG 107 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + ++ Q ++ FF ++R Sbjct: 108 STINLIDYNIFNWHVDVKW-CYNQECSDLLTSFFIKQR 144 >gi|313146154|ref|ZP_07808347.1| cytidine/deoxycytidylate deaminase [Bacteroides fragilis 3_1_12] gi|313134921|gb|EFR52281.1| cytidine/deoxycytidylate deaminase [Bacteroides fragilis 3_1_12] Length = 155 Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 38/120 (31%), Positives = 53/120 (44%), Gaps = 1/120 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K + M A+E ++ P GAV + +I+ NR D TAHAE+ AIR Sbjct: 1 MTKEEL-MRKAIELSRENVANGGGPFGAVIAKDGEIVVTGVNRVTASCDPTAHAEVTAIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L ++Y + EPC MC AI AR+ ++YYG + I F Sbjct: 60 AAASKLGTFNLSGYEIYTSCEPCPMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYDE 119 >gi|300113843|ref|YP_003760418.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii C-113] gi|299539780|gb|ADJ28097.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii C-113] Length = 155 Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 44/110 (40%), Positives = 54/110 (49%), Gaps = 1/110 (0%) Query: 4 GNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM+ A+ A P GAV V + +I+ RA N L+D TAHAE+ AIRM Sbjct: 2 HARFMAEAISLASKGMGDGLGGPFGAVVVRDGEILGRACNDVIALRDPTAHAEVQAIRMA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 CR L+ L LY + EPC MC A ARI R+YY A I Sbjct: 62 CRNLNDFHLEGCTLYCSCEPCPMCLGAAYWARIARIYYAAGQEDAAHIGF 111 >gi|56697818|ref|YP_168189.1| cytidine and deoxycytidylate deaminase family protein [Ruegeria pomeroyi DSS-3] gi|56679555|gb|AAV96221.1| cytidine and deoxycytidylate deaminase family protein [Ruegeria pomeroyi DSS-3] Length = 159 Score = 145 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 72/143 (50%), Positives = 99/143 (69%), Gaps = 1/143 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL EA+ A R E+PVGAV V + ++++ AGNR RE D TAHAEI+A+R C Sbjct: 7 MDQALAEARAAGARGEVPVGAVIVAPDGRVVAAAGNRTRETCDPTAHAEIVALRAACAAA 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E L DLYVTLEPC MCAAA++ ARIRR+YYGA++PK GG+ +G + ++ HH+P Sbjct: 67 GSERLVGHDLYVTLEPCAMCAAALAAARIRRVYYGAADPKSGGVAHGARVFSHPQAHHAP 126 Query: 127 EIYPGISEQRSRQIIQDFFKERR 149 E+Y GI + + ++++ FF ERR Sbjct: 127 EVYDGIGGEAAAELLRGFFAERR 149 >gi|184157635|ref|YP_001845974.1| cytosine/adenosine deaminase [Acinetobacter baumannii ACICU] gi|183209229|gb|ACC56627.1| Cytosine/adenosine deaminase [Acinetobacter baumannii ACICU] Length = 158 Score = 145 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 1/120 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK F+ A+E A N + P GAV V + K+I+ N+ D TAHAE+LAIR Sbjct: 1 MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFYTL 119 ++L L ++ + PC MC AA+ LA I+ + Y SN G + + Y Sbjct: 61 AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDGAPFGLSTAEIYAD 120 >gi|288561455|ref|YP_003424941.1| CMP/dCMP deaminase [Methanobrevibacter ruminantium M1] gi|288544165|gb|ADC48049.1| CMP/dCMP deaminase [Methanobrevibacter ruminantium M1] Length = 155 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 10/141 (7%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM A++EA+ ++ +P+GAV V N+IISR NR + HAE+ AI Sbjct: 2 HQKFMEEAIKEAEISSKEGGLPIGAVLVKENQIISRGHNRLIQKDSSILHAEMDAIENAG 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R L+ E + LY TL PC MC+ A+ L I R+ G + G + Sbjct: 62 R-LNHEDYQKCTLYTTLSPCPMCSGAVILYNIPRVVIGDNQTLMGAEKLLKD-------- 112 Query: 124 HSPEIYPGISEQRSRQIIQDF 144 + EI +++ + +++ +DF Sbjct: 113 NGVEIIV-LNDDKCKELFEDF 132 >gi|320451012|ref|YP_004203108.1| tRNA(Ile)-lysidine synthase [Thermus scotoductus SA-01] gi|320151181|gb|ADW22559.1| tRNA(Ile)-lysidine synthase [Thermus scotoductus SA-01] Length = 514 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 72/148 (48%), Gaps = 16/148 (10%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M+ ALEEA+ A E+PVGAV V+ + + RA N+ +D TAHAE+L +R Sbjct: 377 SEEERYMALALEEARQAFQEGEVPVGAVLVV-GERVYRAHNQVEATRDPTAHAEMLLLRE 435 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L YVTLEPC MC A+ A + + YG N K G + T+F Sbjct: 436 VGRGARGGRL-----YVTLEPCRMCHHALREAGV-EVVYGVENLKEGAL---TRFGQGEG 486 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 G+ E ++++ FF R Sbjct: 487 L------RGGVLEGECAKLLKGFFARLR 508 >gi|3204108|emb|CAA07230.1| putative cytidine deaminase [Cicer arietinum] Length = 186 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F+ A+EEA + P GAV V N+++++ N D TAHAE+ AIR Sbjct: 29 DRDHKFLRKAVEEAYKGVDCGDGGPFGAVIVHNDEVVASCHNMVLNYTDPTAHAEVTAIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L Q L + ++Y + EPC MC AI L+RI+RL YGA I Sbjct: 89 EACKKLKQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF 140 >gi|134097849|ref|YP_001103510.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338] gi|133910472|emb|CAM00585.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338] Length = 162 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 33/94 (35%), Positives = 49/94 (52%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ A+E A + P GAV V + +I++ N+ D TAHAE++AIR C+ L Sbjct: 13 WMARAIELATRSVADGGGPFGAVVVKDGEIVATGHNQVTTNLDPTAHAEVVAIRNACQAL 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L L + EPC MC A+ AR+ + Y Sbjct: 73 GTFKLDGCVLVTSCEPCPMCMASALWARMESVVY 106 >gi|237715975|ref|ZP_04546456.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. D1] gi|237722247|ref|ZP_04552728.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 2_2_4] gi|262407589|ref|ZP_06084137.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294645725|ref|ZP_06723411.1| guanine deaminase [Bacteroides ovatus SD CC 2a] gi|294808352|ref|ZP_06767107.1| guanine deaminase [Bacteroides xylanisolvens SD CC 1b] gi|229443622|gb|EEO49413.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. D1] gi|229448057|gb|EEO53848.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 2_2_4] gi|262354397|gb|EEZ03489.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292638931|gb|EFF57263.1| guanine deaminase [Bacteroides ovatus SD CC 2a] gi|294444428|gb|EFG13140.1| guanine deaminase [Bacteroides xylanisolvens SD CC 1b] gi|295085135|emb|CBK66658.1| Cytosine/adenosine deaminases [Bacteroides xylanisolvens XB1A] Length = 156 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 53/121 (43%), Gaps = 2/121 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAI 59 M K M A+E ++ P GAV + +I++ NR D TAHAE+ AI Sbjct: 1 MTK-EALMRKAIELSKENVENGGGPFGAVIATKDGEIVATGVNRVTASCDPTAHAEVSAI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R L L ++Y + EPC MC AI AR+ ++YYG + I F Sbjct: 60 RAAAAKLGTFDLSGYEIYTSCEPCPMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYD 119 Query: 120 A 120 Sbjct: 120 E 120 >gi|91201072|emb|CAJ74130.1| similar to guanine deaminase [Candidatus Kuenenia stuttgartiensis] Length = 182 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 10/153 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A+ +A+ L + P GA + NN++IS N + D+TAHAEI+AIR C+ Sbjct: 30 EKWMRLAINKAKEGILDGQTPFGACIIKNNRLISCVHNHVWKNTDITAHAEIIAIREACK 89 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----NGTQFYTLA 120 IL+ L +Y T EPC MC +A ARI ++ YGAS I + + Sbjct: 90 ILNTVDLSGCTIYSTCEPCPMCFSACHWARIAKIVYGASIKDALAIGFNELSISNEAMKK 149 Query: 121 TCHHSPEIYPGISEQRSRQI----IQDFFKERR 149 EI + + + + ++ + RR Sbjct: 150 NGGSPVEIKGNVLPKENIALFALWLKQ--QNRR 180 >gi|312129827|ref|YP_003997167.1| cmp/dcmp deaminase zinc-binding protein [Leadbetterella byssophila DSM 17132] gi|311906373|gb|ADQ16814.1| CMP/dCMP deaminase zinc-binding protein [Leadbetterella byssophila DSM 17132] Length = 168 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 1/115 (0%) Query: 7 FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A+E ++ A +P+G V V N +II N E + T+H E++AI CR Sbjct: 13 FMLKAIELSEIAYKSGKGLPIGCVIVRNGEIIGEGHNEIFERVNPTSHGEMVAIERACRN 72 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ L E +Y TLEPC MC AI A+I ++Y+ +N + F Sbjct: 73 INSLQLSECQMYTTLEPCPMCLGAIYWAKINKVYFANTNADASKVGFDDTFIFDE 127 >gi|220904518|ref|YP_002479830.1| CMP/dCMP deaminase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868817|gb|ACL49152.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 155 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 37/94 (39%), Positives = 50/94 (53%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM A+E ++ + P GAV V + KII N D TAHAE+ AIR CR L Sbjct: 6 FMERAIELSKQSMAAGGGPFGAVIVRDGKIIGEGTNNVTPHNDPTAHAEVEAIRNACRAL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L ++ + EPC MC +AI ARI ++Y+ Sbjct: 66 ETFDLSGSAIFTSCEPCPMCLSAIWWARIGKIYF 99 >gi|189462876|ref|ZP_03011661.1| hypothetical protein BACCOP_03576 [Bacteroides coprocola DSM 17136] gi|189430492|gb|EDU99476.1| hypothetical protein BACCOP_03576 [Bacteroides coprocola DSM 17136] Length = 161 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 45/150 (30%), Positives = 64/150 (42%), Gaps = 10/150 (6%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K + M A+E + P GAV N +II+ NR D TAHAE+ AIR Sbjct: 7 MTKEEL-MRKAIELSVQNVAEGGGPFGAVIAKNGEIIAMGVNRVTPDCDPTAHAEVSAIR 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF---- 116 +IL L ++Y + EPC MC AI A + R+YYG S I F Sbjct: 66 TAAKILGTFDLSGCEIYTSCEPCPMCLGAIYWAHLDRMYYGNSKNDAADIGFDDAFIYEE 125 Query: 117 YTLATCHHSP--EIYPGISEQRSRQIIQDF 144 L E+ + + + + +D+ Sbjct: 126 LDLKPADRKLKSEV---LLPEEAIKAFRDW 152 >gi|291005515|ref|ZP_06563488.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338] Length = 160 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 33/94 (35%), Positives = 49/94 (52%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M+ A+E A + P GAV V + +I++ N+ D TAHAE++AIR C+ L Sbjct: 11 WMARAIELATRSVADGGGPFGAVVVKDGEIVATGHNQVTTNLDPTAHAEVVAIRNACQAL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L L + EPC MC A+ AR+ + Y Sbjct: 71 GTFKLDGCVLVTSCEPCPMCMASALWARMESVVY 104 >gi|312378080|gb|EFR24748.1| hypothetical protein AND_10447 [Anopheles darlingi] Length = 186 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 15/154 (9%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVL-----NNKIISRAGNRNRELKDVTAHAEILAI 59 + FM AL++A+ A E+PVG V V + II+R N E K+ T H E + I Sbjct: 2 DCFMEDALQQARLANDLKEVPVGCVFVYGPNEGDGVIIARGCNLVNETKNATRHVEFICI 61 Query: 60 RMG---CRILS----QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 R + I + + VT+EPC MCAAA+ +R + YG N + GG Sbjct: 62 DQALEYARAHGFEPPESIFTSISVVVTVEPCIMCAAALLNLGVREIVYGCRNDRFGG-ST 120 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 L + I G+ + +++++F+K Sbjct: 121 VLDVARLLKSN--IPIRGGVRGDEAMELLKEFYK 152 >gi|167540179|ref|XP_001741595.1| tRNA-specific adenosine deaminase [Entamoeba dispar SAW760] gi|165893805|gb|EDR21932.1| tRNA-specific adenosine deaminase, putative [Entamoeba dispar SAW760] Length = 166 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 3/129 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M+ +M+ AL+ Q A E+PVG V + +I+++ N +E +D T HAEI+ I Sbjct: 1 MQDDKYYMNEALKMGQEALNIGEVPVGCVVINSKGEIVAKGRNHTKEFQDGTQHAEIVCI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L E LYVT EPC MCA A+ I ++ YG SN + GG + Sbjct: 61 NQLVEKHI--RLNECILYVTCEPCIMCAEALKQCGITKIIYGCSNARFGGCGSVMTVIKS 118 Query: 120 ATCHHSPEI 128 + S EI Sbjct: 119 SPYKSSHEI 127 >gi|307354384|ref|YP_003895435.1| CMP/dCMP deaminase zinc-binding protein [Methanoplanus petrolearius DSM 11571] gi|307157617|gb|ADN36997.1| CMP/dCMP deaminase zinc-binding protein [Methanoplanus petrolearius DSM 11571] Length = 148 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 44/143 (30%), Positives = 61/143 (42%), Gaps = 12/143 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM+ A+ EA+ IP+GAV V + KII NR + D HAEI +R R Sbjct: 6 DRFMTAAIIEAKTGHDEGGIPIGAVLVRDGKIIGSGHNRRIQENDPIIHAEIDCLRNAGR 65 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 I S + LY TL PC +CA A+ IRR+ G S G E Sbjct: 66 IGS---YKDTTLYSTLMPCYLCAGAVVQFGIRRVVVGESRNFAGAKEFLISM-------- 114 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 E+ + ++ +F K Sbjct: 115 GVEVTD-LDLDECADMMAEFIKN 136 >gi|145511355|ref|XP_001441605.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124408855|emb|CAK74208.1| unnamed protein product [Paramecium tetraurelia] Length = 158 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 14/144 (9%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ALE+A+ E+PVG V V + KI+ +A N + K+ T H EI+ I Sbjct: 10 KYMKMALEQAELGRQNKEVPVGCVIVNRNDGKIVEKAYNNTNKSKNATQHCEIICINRMN 69 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R L + L+VT EPC MC A++ +I +YYG +N + GG + Sbjct: 70 R-----DLEDCILFVTCEPCIMCGQALNYVKIHSVYYGCNNSRFGGNGTVLSLNKYPSF- 123 Query: 124 HSPEIYPGISEQRSRQIIQDFFKE 147 G E +I+QDF++E Sbjct: 124 ------GGHLEYDCMKILQDFYEE 141 >gi|325270746|ref|ZP_08137337.1| guanine deaminase [Prevotella multiformis DSM 16608] gi|324986862|gb|EGC18854.1| guanine deaminase [Prevotella multiformis DSM 16608] Length = 155 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 10/150 (6%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K + M A++ + ++ P GAV N +II+ N D TAHAE+ IR Sbjct: 1 MTKEEL-MRRAVKLSADSVRNGGGPFGAVIARNGEIIAEGSNGVTIYNDPTAHAEVSVIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF---- 116 C L L ++Y + EPC MC AI A + ++YY I F Sbjct: 60 KACHQLHTFDLTGCEIYTSCEPCPMCLGAIYWAHLDKIYYANDRKDAAAIGFDDDFIYQE 119 Query: 117 YTLATCHHSP--EIYPGISEQRSRQIIQDF 144 L H EI + + ++ + + Sbjct: 120 IELEPLHRKKPSEI---LLRSEAIKVFEQW 146 >gi|79328917|ref|NP_001031959.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis thaliana] gi|332006386|gb|AED93769.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis thaliana] Length = 204 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 2/120 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + F++ A+EEA + P GAV V NN++++ N + D TAHAE+ AIR Sbjct: 47 DSDHKFLTQAVEEAYKGVDCGDGGPFGAVIVHNNEVVASCHNMVLKYTDPTAHAEVTAIR 106 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L++ L E ++Y + EPC MC AI L+R++RL YGA I F A Sbjct: 107 EACKKLNKIELSECEIYASCEPCPMCFGAIHLSRLKRLVYGAKAEAAIAIGF-DDFIADA 165 >gi|77462818|ref|YP_352322.1| hypothetical protein RSP_2267 [Rhodobacter sphaeroides 2.4.1] gi|77387236|gb|ABA78421.1| cytidine and deoxycytidylate deaminase family protein [Rhodobacter sphaeroides 2.4.1] Length = 150 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 65/115 (56%), Positives = 80/115 (69%), Gaps = 1/115 (0%) Query: 35 KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 ++++RAGNR REL D TAHAE+LAIR C L E L DLYVTLEPC MCAAAIS AR Sbjct: 35 QVVARAGNRCRELSDPTAHAEMLAIRAACATLG-ERLTGCDLYVTLEPCPMCAAAISAAR 93 Query: 95 IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 I RLYYGA++PK GG+ G + + CHH PE+Y GI E + +++ FF RR Sbjct: 94 IARLYYGAADPKSGGVAQGARVFAHPQCHHVPEVYDGIGEAEAAALLRGFFSARR 148 >gi|221638686|ref|YP_002524948.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides KD131] gi|221159467|gb|ACM00447.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides KD131] Length = 144 Score = 144 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 65/115 (56%), Positives = 80/115 (69%), Gaps = 1/115 (0%) Query: 35 KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 ++++RAGNR REL D TAHAE+LAIR C L E L DLYVTLEPC MCAAAIS AR Sbjct: 29 QVVARAGNRCRELSDPTAHAEMLAIRAACATLG-ERLTGCDLYVTLEPCPMCAAAISAAR 87 Query: 95 IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 I RLYYGA++PK GG+ G + + CHH PE+Y GI E + +++ FF RR Sbjct: 88 IARLYYGAADPKSGGVAQGARVFAHPQCHHVPEVYDGIGEAEAAALLRGFFAARR 142 >gi|319901465|ref|YP_004161193.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides helcogenes P 36-108] gi|319416496|gb|ADV43607.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides helcogenes P 36-108] Length = 156 Score = 144 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 56/116 (48%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM A++ A + R P GAV V + KI+ + N D TAHAE++AIR Sbjct: 1 MAYQKEFMETAIQLALDNINRGGGPFGAVIVKDGKIVGQGCNSVTNHLDPTAHAEVMAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 C+ L IL ++Y + EPC MC +AI A I R+YY + F Sbjct: 61 NTCQALDTFILEGCEIYSSCEPCPMCLSAIYWAHIDRIYYACTKCDAAQAGFDDSF 116 >gi|83955334|ref|ZP_00963989.1| cytidine and deoxycytidylate deaminase family protein [Sulfitobacter sp. NAS-14.1] gi|83840327|gb|EAP79501.1| cytidine and deoxycytidylate deaminase family protein [Sulfitobacter sp. NAS-14.1] Length = 151 Score = 144 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 69/129 (53%), Positives = 91/129 (70%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV V + +++++AGNR REL D TAHAE+LAIR C E L LYVTL Sbjct: 21 GEVPVGAVIVAPDGQVVAQAGNRTRELNDPTAHAEVLAIRAACAAAGSERLGGHALYVTL 80 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCAAAIS AR+ RLYYGAS+PK GG+ G + ++ A CHH+P++Y I+ S Q+ Sbjct: 81 EPCAMCAAAISAARVARLYYGASDPKSGGVAQGARVFSHAQCHHAPDVYDAIAAPESEQL 140 Query: 141 IQDFFKERR 149 ++ FF E+R Sbjct: 141 LRAFFAEKR 149 >gi|332308193|ref|YP_004436044.1| CMP/dCMP deaminase zinc-binding protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175522|gb|AEE24776.1| CMP/dCMP deaminase zinc-binding protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 145 Score = 144 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EA+ IP+G+V V ++II R NR + H E+ A+ R Sbjct: 2 DKFMQAAIDEAKQGLAEGGIPIGSVLVYQDEIIGRGHNRRVQSGSPILHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + LY TL PC+MC+ I L I ++ G N G E+ + Sbjct: 62 QPAS-VYKASTLYTTLSPCSMCSGTILLYGIPKVVIG-ENKTFQGEES---LLKSRGVN- 115 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 + Q ++ DF +++ Sbjct: 116 ----IDLVHSQECIDLMNDFIRDK 135 >gi|109900168|ref|YP_663423.1| cytosine deaminase [Pseudoalteromonas atlantica T6c] gi|109702449|gb|ABG42369.1| Cytosine deaminase [Pseudoalteromonas atlantica T6c] Length = 145 Score = 144 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EA+ IP+G+V V NNKII R N+ + H E+ A+ R Sbjct: 2 DKFMQAAIDEAKLGLAEGGIPIGSVLVHNNKIIGRGHNKRVQSGSPILHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 ++ + E LY TL PC+MC+ I L I ++ G N G E+ T + Sbjct: 62 QPAR-VYKESTLYTTLSPCSMCSGTILLYGIPKVVIG-ENQTFMGEES---LLTSRGVNT 116 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 + Q ++ DF +++ Sbjct: 117 QV-----LHNQECISLMNDFIRDK 135 >gi|297582994|ref|YP_003698774.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens MLS10] gi|297141451|gb|ADH98208.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens MLS10] Length = 147 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 10/148 (6%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A+E A+ + + P GA+ V + +++ A N+ D T H EI+ +R Sbjct: 3 NTHEYWMRQAIELARASKIAGNDPFGALLVKDGEVVMTATNQIHTATDPTHHPEIVLVRD 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-------ENGT 114 CR L +V LY + EPC MC+ A+ + + RL Y S+ + GI +G Sbjct: 63 YCRQEGITDLKDVTLYTSCEPCVMCSGAMVWSNLGRLVYSVSHEQLLGITASNIQLSSGD 122 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQ 142 F PE+ P + + ++ Sbjct: 123 VFLNSP---WKPEVIPLVCNEEGLRLFS 147 >gi|108801923|ref|YP_642120.1| tRNA-adenosine deaminase [Mycobacterium sp. MCS] gi|119871075|ref|YP_941027.1| tRNA-adenosine deaminase [Mycobacterium sp. KMS] gi|126437904|ref|YP_001073595.1| tRNA-adenosine deaminase [Mycobacterium sp. JLS] gi|108772342|gb|ABG11064.1| tRNA-adenosine deaminase [Mycobacterium sp. MCS] gi|119697164|gb|ABL94237.1| tRNA-adenosine deaminase [Mycobacterium sp. KMS] gi|126237704|gb|ABO01105.1| tRNA-adenosine deaminase [Mycobacterium sp. JLS] Length = 150 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80 ++P+GAV + ++RA N L D TAHAE+LA+R +L L L VT+ Sbjct: 22 DVPIGAVVFGPDGTELARAANAREALGDPTAHAEVLALRAAAAVLGDGWRLEGTTLAVTV 81 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ LAR+ R+ +GA PK G + + +H P + G+ + Sbjct: 82 EPCTMCAGALVLARVARVVFGAWEPKTGAVGSLWDVVRDRRLNHRPGVRGGVLADECAKP 141 Query: 141 IQDFFKERR 149 ++ FF +R Sbjct: 142 LEAFFARQR 150 >gi|217071124|gb|ACJ83922.1| unknown [Medicago truncatula] Length = 186 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F+ A+EEA + P GAV V N+++++ N D TAHAE+ AIR Sbjct: 29 DRDHKFLRRAVEEAYKGVDCGDGGPFGAVIVHNDEVVASCHNMVLNFTDPTAHAEVTAIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L Q L + ++Y + EPC MC AI L+RI+RL YGA I Sbjct: 89 EACKKLKQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF 140 >gi|195143831|ref|XP_002012900.1| GL23678 [Drosophila persimilis] gi|194101843|gb|EDW23886.1| GL23678 [Drosophila persimilis] Length = 160 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 9/147 (6%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL EA+ A E+PVG V V +K+++R N ++ T HAE + I Sbjct: 3 AFMEEALMEARRARDAGEVPVGCVFVHEDKVVARGANEVNVSRNATRHAEFICIDAILAY 62 Query: 66 LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 ++ LP E+ + VT+EPC MC+AA+ ++ + +G N + GG T Sbjct: 63 CREKNLPARQMFSEIIVVVTVEPCIMCSAALHTLGVQEIIFGCENDRFGG---KTVVNVG 119 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146 A +I G+ + ++++F+K Sbjct: 120 AVVGKKIKITGGVRGDEAMALLKEFYK 146 >gi|126461710|ref|YP_001042824.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides ATCC 17029] gi|126103374|gb|ABN76052.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides ATCC 17029] Length = 150 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 65/115 (56%), Positives = 80/115 (69%), Gaps = 1/115 (0%) Query: 35 KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 ++++RAGNR REL D TAHAE+LAIR C L E L DLYVTLEPC MCAAAIS AR Sbjct: 35 QVVARAGNRCRELSDPTAHAEMLAIRAACATLG-ERLTGCDLYVTLEPCPMCAAAISAAR 93 Query: 95 IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 I RLYYGA++PK GG+ G + + CHH PE+Y GI E + +++ FF RR Sbjct: 94 IARLYYGAADPKSGGVAQGARVFAHPQCHHVPEVYDGIGEAEAAALLRGFFAARR 148 >gi|282891755|ref|ZP_06300236.1| hypothetical protein pah_c197o065 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498339|gb|EFB40677.1| hypothetical protein pah_c197o065 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 161 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 4/105 (3%) Query: 2 KKGNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 K FM A+ ++ A + GAV V + KII+ N+ + D T HAE+ A Sbjct: 4 KNHEEFMKRAIALSRKASIEEKTGGV-FGAVIVKDGKIIAEGYNQVLKHNDPTWHAEMHA 62 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 IR C+ L + L DLY + E C MC +A A I +YY A+ Sbjct: 63 IREACKKLGKPHLEGCDLYTSAECCPMCLSAAYWAHIDHIYYAAT 107 >gi|12060484|dbj|BAB20627.1| hypothetical protein [Thermosynechococcus elongatus] Length = 105 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 42/93 (45%), Positives = 55/93 (59%), Gaps = 1/93 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M A+ A+ A +E+PVGAV V N++I+ NR + D TAHAEI+A+R Sbjct: 13 HDFWMQQAIALAEQAGAADEVPVGAVIVSAENELIATGENRRQRDHDPTAHAEIIALRRA 72 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 + L L LYVTLEPC MCA AI ARI Sbjct: 73 GQRLGTWYLTGCRLYVTLEPCPMCAGAIVQARI 105 >gi|67481305|ref|XP_656002.1| cytidine/deoxycytidylate deaminase family protein [Entamoeba histolytica HM-1:IMSS] gi|56473174|gb|EAL50617.1| cytidine/deoxycytidylate deaminase family protein [Entamoeba histolytica HM-1:IMSS] Length = 166 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 5/129 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M+ +M+ AL+ Q A E+PVG V + +I+++ N +E +D T HAEI+ I Sbjct: 1 MQDDKYYMNEALKMGQEALNIGEVPVGCVVINSKGEIVAKGRNHTKEFQDGTQHAEIVCI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY-- 117 L E LYVT EPC MCA A+ I ++ YG SN + GG + Sbjct: 61 NQLVEKHV--HLSECILYVTCEPCIMCAEALKQCGITKIIYGCSNARFGGCGSVMTVIKS 118 Query: 118 TLATCHHSP 126 +L +H Sbjct: 119 SLYKSNHEI 127 >gi|157135264|ref|XP_001656575.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2, putative [Aedes aegypti] gi|108870242|gb|EAT34467.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2, putative [Aedes aegypti] Length = 171 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 9/148 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM ALE+A+ A E+PVG V V +II+ N E K+ T H E + I Sbjct: 12 DHFMEQALEQARKAEQLKEVPVGCVFVYRGEIIANGCNLVNETKNATRHVEFICIDQVLE 71 Query: 65 ILSQEILPEVDLY------VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 L D++ VT+EPC MCAAA+ +R + YG N + GG T Sbjct: 72 YCKNRSLKHEDVFREVTVVVTVEPCIMCAAALIELNVREVIYGCKNDRFGGC---TVLDV 128 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146 S I G+ + +++++F+K Sbjct: 129 PGLLKTSIPIRGGVRADEAMELLKEFYK 156 >gi|332557706|ref|ZP_08412028.1| hypothetical protein RSWS8N_01605 [Rhodobacter sphaeroides WS8N] gi|332275418|gb|EGJ20733.1| hypothetical protein RSWS8N_01605 [Rhodobacter sphaeroides WS8N] Length = 150 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 66/115 (57%), Positives = 80/115 (69%), Gaps = 1/115 (0%) Query: 35 KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 ++++RAGNR REL D TAHAE+LAIR C L E L DLYVTLEPC MCAAAIS AR Sbjct: 35 QVVARAGNRCRELSDPTAHAEMLAIRAACATLG-ERLTGCDLYVTLEPCPMCAAAISAAR 93 Query: 95 IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 I RLYYGA++PK GG+ G + + CHH PEIY GI E + +++ FF RR Sbjct: 94 IARLYYGAADPKSGGVAQGARVFAHPQCHHVPEIYDGIGEAEAAALLRGFFSARR 148 >gi|29345731|ref|NP_809234.1| cytidine/deoxycytidylate deaminase [Bacteroides thetaiotaomicron VPI-5482] gi|253567719|ref|ZP_04845130.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 1_1_6] gi|298384629|ref|ZP_06994189.1| guanine deaminase [Bacteroides sp. 1_1_14] gi|29337624|gb|AAO75428.1| cytidine/deoxycytidylate deaminase [Bacteroides thetaiotaomicron VPI-5482] gi|251841792|gb|EES69872.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 1_1_6] gi|298262908|gb|EFI05772.1| guanine deaminase [Bacteroides sp. 1_1_14] Length = 156 Score = 143 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 53/121 (43%), Gaps = 2/121 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAI 59 M K + M A+E ++ P GAV +II+ NR D TAHAE+ AI Sbjct: 1 MTKEEL-MRKAIELSKENVANGGGPFGAVIATKEGEIIATGVNRVTSSCDPTAHAEVSAI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R L L ++Y + EPC MC AI AR+ ++YYG + I F Sbjct: 60 RAAAAKLGTFNLSGYEIYTSCEPCPMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYD 119 Query: 120 A 120 Sbjct: 120 E 120 >gi|323454898|gb|EGB10767.1| hypothetical protein AURANDRAFT_22290 [Aureococcus anophagefferens] Length = 172 Score = 143 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 11/146 (7%) Query: 8 MSCALEEAQNA-ALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M ALE A++A A + E+PVG V V +N + I+ A N E T HAE++AI + Sbjct: 1 MRRALELAEDAVAEQGEVPVGCVFVNDNNVEIASAANETNEAMCATRHAELVAIDGALKH 60 Query: 66 LSQE----ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + LYVT EPC MCA+A+S I + Y+G N K GG + + Sbjct: 61 SAARGQPLDWTRCALYVTCEPCIMCASALSQLGIAKCYFGCRNDKFGGCGSILSLHEGN- 119 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147 +I G+ E + + + F+ Sbjct: 120 ----FDIVEGLREAEAVDLFRRFYDR 141 >gi|198451012|ref|XP_001358211.2| GA18791 [Drosophila pseudoobscura pseudoobscura] gi|198131295|gb|EAL27348.2| GA18791 [Drosophila pseudoobscura pseudoobscura] Length = 160 Score = 143 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 9/147 (6%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM AL EA+ A E+PVG V V +K+++R N ++ T HAE + I Sbjct: 3 AFMEEALMEARRARDAGEVPVGCVFVHEDKVVARGANEVNVSRNATRHAEFICIDAILAY 62 Query: 66 LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 ++ LP E+ + VT+EPC MC+AA+ ++ + +G N + GG T Sbjct: 63 CREKNLPARQMFSEIIVVVTVEPCIMCSAALHTLGVQEIIFGCENDRFGG---KTVVNVG 119 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146 A +I G+ + ++++F+K Sbjct: 120 AVVGKKIKITGGVRGDEAMALLKEFYK 146 >gi|255718193|ref|XP_002555377.1| KLTH0G07832p [Lachancea thermotolerans] gi|238936761|emb|CAR24940.1| KLTH0G07832p [Lachancea thermotolerans] Length = 250 Score = 143 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 11/155 (7%) Query: 1 MKKGNV--FMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEI 56 M + FM A + A+ A E PV + V +++++ N AHAE Sbjct: 1 MSLDSYVHFMRMATKLARYALDHGETPVACIFVHTPADQVVAYGMNDTNRSLTGIAHAEF 60 Query: 57 LAIRMGCRILS---QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 + I I ++ LYVT+EPC MCA+A+ I+++ +G N + GG + Sbjct: 61 MGIEQIQSKFGAQDTSIFKDITLYVTVEPCIMCASALKQLGIQKVVFGCGNERFGGNGSI 120 Query: 114 TQFYTL---ATCHHSPEIYPGISEQRSRQIIQDFF 145 A + + PGI + + +++ F+ Sbjct: 121 LSIQKDSCTAPQNKHISV-PGILRKEAIMLLRYFY 154 >gi|16078382|ref|NP_389200.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. 168] gi|221309178|ref|ZP_03591025.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. 168] gi|221313504|ref|ZP_03595309.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318426|ref|ZP_03599720.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. JH642] gi|221322700|ref|ZP_03603994.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. SMY] gi|321315069|ref|YP_004207356.1| guanine deaminase [Bacillus subtilis BSn5] gi|23396605|sp|O34598|GUAD_BACSU RecName: Full=Guanine deaminase; Short=GDEase; Short=Guanase; Short=Guanine aminase; AltName: Full=Guanine aminohydrolase; Short=GAH gi|2632037|emb|CAA05596.1| YkoA [Bacillus subtilis] gi|2633671|emb|CAB13174.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. 168] gi|291483843|dbj|BAI84918.1| guanine deaminase [Bacillus subtilis subsp. natto BEST195] gi|320021343|gb|ADV96329.1| guanine deaminase [Bacillus subtilis BSn5] Length = 156 Score = 143 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 50/115 (43%), Gaps = 1/115 (0%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ A+ A P GAV V + II+ N D TAHAE+ AIR Sbjct: 2 NHETFLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRK 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 C++L L + LY + EPC MC AI AR + ++Y A + F Sbjct: 62 ACKVLGAYQLDDCILYTSCEPCPMCLGAIYWARPKAVFYAAEHTDAAEAGFDDSF 116 >gi|83944514|ref|ZP_00956966.1| cytidine and deoxycytidylate deaminase family protein [Sulfitobacter sp. EE-36] gi|83844620|gb|EAP82505.1| cytidine and deoxycytidylate deaminase family protein [Sulfitobacter sp. EE-36] Length = 151 Score = 143 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 67/129 (51%), Positives = 89/129 (68%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV V + +++++AGNR REL D TAHAE+LAIR C E L LYVTL Sbjct: 21 GEVPVGAVIVAPDGQVVAQAGNRTRELNDPTAHAEVLAIRAACAAAGSERLGGHALYVTL 80 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCAAAIS AR+ RLYYGAS+PK GG+ G + ++ CHH+P++Y I+ S + Sbjct: 81 EPCAMCAAAISAARVARLYYGASDPKSGGVAQGARVFSHEQCHHAPDVYDAIAAPESEDL 140 Query: 141 IQDFFKERR 149 ++ FF E+R Sbjct: 141 LKAFFAEKR 149 >gi|255008429|ref|ZP_05280555.1| putative nucleotide deaminase [Bacteroides fragilis 3_1_12] Length = 149 Score = 143 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 50/113 (44%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+E ++ P GAV + +I+ NR D TAHAE+ AIR L Sbjct: 1 MRKAIELSRENVANGGGPFGAVIAKDGEIVVTGVNRVTASCDPTAHAEVTAIRAAASKLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L ++Y + EPC MC AI AR+ ++YYG + I F Sbjct: 61 TFNLSGYEIYTSCEPCPMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYDE 113 >gi|260574584|ref|ZP_05842587.1| CMP/dCMP deaminase zinc-binding [Rhodobacter sp. SW2] gi|259023001|gb|EEW26294.1| CMP/dCMP deaminase zinc-binding [Rhodobacter sp. SW2] Length = 161 Score = 143 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 66/110 (60%), Positives = 80/110 (72%) Query: 40 AGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 AGNR REL D TAHAE+LAIR C E L DLYVTLEPC MCAAAISLARI RLY Sbjct: 51 AGNRVRELCDPTAHAEVLAIRAACAAAGSERLVGHDLYVTLEPCPMCAAAISLARIGRLY 110 Query: 100 YGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 YGA++PK GG+ GT+ ++ CHH PEIY GI +++ +++DFF +RR Sbjct: 111 YGAADPKSGGVAQGTRVFSHPQCHHVPEIYDGIGAEQAADLLRDFFADRR 160 >gi|320108633|ref|YP_004184223.1| Guanine deaminase [Terriglobus saanensis SP1PR4] gi|319927154|gb|ADV84229.1| Guanine deaminase [Terriglobus saanensis SP1PR4] Length = 161 Score = 143 bits (363), Expect = 7e-33, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 50/117 (42%), Gaps = 1/117 (0%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM A+ A P G V V + ++I+ N D TAHAE+ AIR Sbjct: 6 TQHAQFMQQAIRLATENVTSGRGGPFGCVIVRDGEVIAARANSVTATNDPTAHAEVNAIR 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 C L L D+Y + EPC MC AAI AR R +Y+G + F Sbjct: 66 AACAALGTFQLTGCDVYTSCEPCPMCLAAIYWARCRSIYFGNTAQDAAEAGFDDSFL 122 >gi|213025788|ref|ZP_03340235.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 98 Score = 143 bits (363), Expect = 7e-33, Method: Composition-based stats. Identities = 41/92 (44%), Positives = 53/92 (57%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G Sbjct: 7 DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 +L L + LYVTLEPC MCA A+ +R Sbjct: 67 GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSR 98 >gi|330991261|ref|ZP_08315212.1| tRNA-specific adenosine deaminase [Gluconacetobacter sp. SXCC-1] gi|329761280|gb|EGG77773.1| tRNA-specific adenosine deaminase [Gluconacetobacter sp. SXCC-1] Length = 107 Score = 143 bits (363), Expect = 7e-33, Method: Composition-based stats. Identities = 44/105 (41%), Positives = 64/105 (60%) Query: 45 RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 D +AHAE+ +R R+ L + LYVTLEPC MCAAA R+ R+ +GA + Sbjct: 2 EACHDPSAHAEMQVMRAATRLRGGARLVDCTLYVTLEPCPMCAAAAIHFRMGRIVFGAYD 61 Query: 105 PKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 PKGGG+E+G + +T C H PE G+ E+ + ++QDFF++ R Sbjct: 62 PKGGGVEHGPRLFTHPRCLHRPETVGGVREREAGTLLQDFFRQLR 106 >gi|52140651|ref|YP_086177.1| cytidine/deoxycytidylate deaminase family protein; guanine deaminase [Bacillus cereus E33L] gi|51974120|gb|AAU15670.1| cytidine/deoxycytidylate deaminase family protein; probable guanine deaminase [Bacillus cereus E33L] Length = 153 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 1/116 (0%) Query: 3 KGNVFMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM A++ A N P GAV V + +I+++ N D TAHAE+L IR Sbjct: 2 SHKEFMKLAIDLAYNNTKNEKGKPFGAVLVKDGEIVAKGVNEVLTTHDPTAHAELLTIRE 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 CRILS L + LY + EPC MC +AI A ++ +YY ++ + I GT++ Sbjct: 62 ACRILSTSDLSDCILYASGEPCPMCLSAIYWANLKHVYYSYTSQEEEEIGLGTKYV 117 >gi|298483515|ref|ZP_07001691.1| guanine deaminase [Bacteroides sp. D22] gi|298270272|gb|EFI11857.1| guanine deaminase [Bacteroides sp. D22] Length = 156 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 2/121 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAI 59 M K M A+E ++ + P GAV + +I++ NR D TAHAE+ AI Sbjct: 1 MTK-EALMRKAIELSKENVVNGGGPFGAVIATKDGEIVATGVNRVTASCDPTAHAEVSAI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R L L ++Y + EPC MC AI AR+ ++YYG + I F Sbjct: 60 RAAAAKLGTFDLSGYEIYTSCEPCPMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYD 119 Query: 120 A 120 Sbjct: 120 E 120 >gi|123966234|ref|YP_001011315.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9515] gi|123200600|gb|ABM72208.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str. MIT 9515] Length = 165 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 2/145 (1%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M L + E+P+ A + + I R N+ D HAE++A+R Sbjct: 19 KWMRSILRRSDEVGKV-ELPITAFIIDERGRCIGRGSNKRETNNDPLGHAELIALRQASW 77 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 I + E + V LEPCTMCAAA+ AR+ + YGA + K GG + HH Sbjct: 78 IKNDWRFNECSIIVNLEPCTMCAAALVQARMGNVIYGAEDHKRGGFGGTIDLSKHESAHH 137 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 + GI ++ I+ +FK+ R Sbjct: 138 KMNVIRGILDKDCENRIKIWFKKLR 162 >gi|51248026|pdb|1WKQ|A Chain A, Crystal Structure Of Bacillus Subtilis Guanine Deaminase. The First Domain-Swapped Structure In The Cytidine Deaminase Superfamily gi|51248027|pdb|1WKQ|B Chain B, Crystal Structure Of Bacillus Subtilis Guanine Deaminase. The First Domain-Swapped Structure In The Cytidine Deaminase Superfamily Length = 164 Score = 143 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 50/115 (43%), Gaps = 1/115 (0%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ A+ A P GAV V + II+ N D TAHAE+ AIR Sbjct: 10 NHETFLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRK 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 C++L L + LY + EPC MC AI AR + ++Y A + F Sbjct: 70 ACKVLGAYQLDDCILYTSCEPCPMCLGAIYWARPKAVFYAAEHTDAAEAGFDDSF 124 >gi|50513754|pdb|1TIY|A Chain A, X-Ray Structure Of Guanine Deaminase From Bacillus Subtilis Northeast Structural Genomics Consortium Target Sr160 gi|50513755|pdb|1TIY|B Chain B, X-Ray Structure Of Guanine Deaminase From Bacillus Subtilis Northeast Structural Genomics Consortium Target Sr160 Length = 164 Score = 143 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 1/115 (0%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ A+ A P GAV V + II+ N D TAHAE+ AIR Sbjct: 2 NHETFLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRK 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 C++L L + LY + EPC C AI AR + ++Y A + F Sbjct: 62 ACKVLGAYQLDDCILYTSCEPCPXCLGAIYWARPKAVFYAAEHTDAAEAGFDDSF 116 >gi|297833236|ref|XP_002884500.1| deoxycytidine deaminase [Arabidopsis lyrata subsp. lyrata] gi|297330340|gb|EFH60759.1| deoxycytidine deaminase [Arabidopsis lyrata subsp. lyrata] Length = 191 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 44/118 (37%), Positives = 65/118 (55%), Gaps = 1/118 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ + +++ A+EEA + P GAV V N+I+ N + KD TAHAEI+AIR Sbjct: 38 ERDHKYLTQAVEEAYIGVECGDGRPFGAVIVHKNEIVVSCHNMVLKYKDPTAHAEIIAIR 97 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 C+ L++ L E +LY + EPC MC AI L+R++RL YGA I + Sbjct: 98 EACKKLNEIKLSECELYASCEPCPMCFGAIHLSRLKRLVYGAKAEAAVAIGFNSIIAD 155 >gi|114765383|ref|ZP_01444498.1| cytidine and deoxycytidylate deaminase family protein [Pelagibaca bermudensis HTCC2601] gi|114542226|gb|EAU45256.1| cytidine and deoxycytidylate deaminase family protein [Roseovarius sp. HTCC2601] Length = 145 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 69/116 (59%), Positives = 83/116 (71%) Query: 34 NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93 +++ AGNR REL D TAHAEILA+R CR E LP DLYVTLEPC MCAAAIS A Sbjct: 28 GAVVACAGNRTRELDDPTAHAEILALRAACRAAGSERLPGHDLYVTLEPCPMCAAAISFA 87 Query: 94 RIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 RI RLYYGA++PK GG+++G + Y A CHH PE+Y GIS S +++ FF ERR Sbjct: 88 RIARLYYGAADPKSGGVDHGARVYAHAQCHHVPEVYDGISAAPSEALLKRFFAERR 143 >gi|183601156|ref|ZP_02962649.1| hypothetical protein PROSTU_04786 [Providencia stuartii ATCC 25827] gi|188019501|gb|EDU57541.1| hypothetical protein PROSTU_04786 [Providencia stuartii ATCC 25827] Length = 154 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 5/150 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + F+ A+ A+ P GAV V + +++ N+ EL D TAHAE++A+R Sbjct: 2 QDKQFLQQAISLAKENVKAGGRPFGAVIVRDGAVVATGVNQMLELNDPTAHAELMALRQA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ-----FY 117 L + L + +Y + +PC MC AA+ +A I R+ Y SN T+ Sbjct: 62 GETLKRTRLEDCVVYASGQPCPMCLAAMRMAGISRIVYAYSNQDAEPFGLSTEAIAQSLR 121 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 H E ++ + F++E Sbjct: 122 VEPQQQHGLTFIQLKPENEAQSALYTFWRE 151 >gi|312128288|ref|YP_003993162.1| riboflavin biosynthesis protein ribd [Caldicellulosiruptor hydrothermalis 108] gi|311778307|gb|ADQ07793.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor hydrothermalis 108] Length = 371 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 18/152 (11%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ ALE A+ A + VG V V N II + ++ K HAE+LAI Sbjct: 5 SHSYYMNMALELAKKASPLVLPNPRVGCVIVKNGTIIGKGYHQKYGEK----HAEVLAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 I + L +YV+LEPC C AI + I+++ +P G Sbjct: 61 DA--IKNGYSLKNATMYVSLEPCCHFGKQPPCTEAIIKSGIKKVVIATRDPNPFVNGKGI 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q H E+ G+ E+ + I +DFFK Sbjct: 119 QILKQ----HGIEVVEGVLEKEAESINKDFFK 146 >gi|224025654|ref|ZP_03644020.1| hypothetical protein BACCOPRO_02394 [Bacteroides coprophilus DSM 18228] gi|224018890|gb|EEF76888.1| hypothetical protein BACCOPRO_02394 [Bacteroides coprophilus DSM 18228] Length = 155 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 10/150 (6%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K ++ M A+E + P GAV N +I++ NR D TAHAE+ AIR Sbjct: 1 MTKEDL-MRKAIELSIRNVAEGGGPFGAVIARNGEIVATGVNRVTPDCDPTAHAEVSAIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF---- 116 ++L L ++Y + EPC MC AI A + +YYG + I F Sbjct: 60 AAAKVLGTFDLSGCEIYTSCEPCPMCLGAIYWAHLDCMYYGNNKHDAAAIGFDDAFIYEE 119 Query: 117 YTLATCHHSP--EIYPGISEQRSRQIIQDF 144 L E+ + + + Q +D+ Sbjct: 120 LDLKPADRKLKSEV---LLPEEAIQAFKDW 146 >gi|229551942|ref|ZP_04440667.1| guanine deaminase [Lactobacillus rhamnosus LMS2-1] gi|229314677|gb|EEN80650.1| guanine deaminase [Lactobacillus rhamnosus LMS2-1] Length = 167 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Query: 7 FMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ A EEA+ + P G V V N +++SRA NR D TAH EI AIR + Sbjct: 18 FMAMADEEAKANVNGSDGGPFGCVIVKNGQVVSRAHNRVLVDHDPTAHGEITAIRKAGQA 77 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 L L +LY + PC MC +AI A I+++YYG + I Sbjct: 78 LGTHDLSGCELYTSAMPCPMCLSAIIWANIKQVYYGNTADDAAAIGF 124 >gi|268591994|ref|ZP_06126215.1| guanine deaminase [Providencia rettgeri DSM 1131] gi|291312385|gb|EFE52838.1| guanine deaminase [Providencia rettgeri DSM 1131] Length = 155 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 56/113 (49%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 F+ A+ A P GA+ V + ++++ N+ EL D TAHAE++A+R Sbjct: 2 SDTQFLQQAINLAMENVRAGGRPFGAIVVCDGQVVASGVNQMLELNDPTAHAELMALRQA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + LS+ L + +Y + +PC MC AAI +A I R+ Y SN T Sbjct: 62 GQKLSRVKLDDCVVYASGQPCPMCLAAIRMAGISRVVYAYSNDDAAPFGLSTD 114 >gi|163792400|ref|ZP_02186377.1| putative nucleotide deaminase [alpha proteobacterium BAL199] gi|159182105|gb|EDP66614.1| putative nucleotide deaminase [alpha proteobacterium BAL199] Length = 156 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 41/111 (36%), Positives = 52/111 (46%), Gaps = 1/111 (0%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + A+E +Q NA P GAV V + I+ NR D TAHAE++AIR Sbjct: 2 SDEKHLRRAIELSQGNAEAATGGPFGAVVVRDGMIVGEGANRVITDFDPTAHAEVVAIRA 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 CR L L +Y + EPC MC AAI ARI R+ Y + I Sbjct: 62 ACRQLGTYDLSGAVIYTSCEPCPMCLAAILWARIDRMVYANTRADAAAIGF 112 >gi|255693462|ref|ZP_05417137.1| guanine deaminase [Bacteroides finegoldii DSM 17565] gi|260620746|gb|EEX43617.1| guanine deaminase [Bacteroides finegoldii DSM 17565] Length = 156 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 53/121 (43%), Gaps = 2/121 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M K + M A+E ++ P GAV +I++ NR D TAHAE+ AI Sbjct: 1 MTKEEL-MRKAIELSKENIENGGGPFGAVIATKEGEIVATGVNRVTASCDPTAHAEVSAI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R L L ++Y + EPC MC AI AR+ ++YYG + I F Sbjct: 60 RAAAAKLGTFNLSGYEIYTSCEPCPMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYD 119 Query: 120 A 120 Sbjct: 120 E 120 >gi|94985096|ref|YP_604460.1| tRNA(Ile)-lysidine synthetase-like protein [Deinococcus geothermalis DSM 11300] gi|94555377|gb|ABF45291.1| tRNA(Ile)-lysidine synthetase-like protein and cytosine deaminase [Deinococcus geothermalis DSM 11300] Length = 539 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 2/129 (1%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV + + +I R N +RE D+T HAE+ A+R L L + L VTL Sbjct: 403 GEVPVGAVVLGPDGAVIGRGRNTSREHGDMTRHAELAALREAAHSLGTPYLTDCTLVVTL 462 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MC AI AR+ R+ YGA NPK G + T T A H P + G+ + ++ Sbjct: 463 EPCPMCLGAILEARVGRVVYGAPNPKAGALGGVTDLLT-AHWGHRPAVTGGLRAGEAARL 521 Query: 141 IQDFFKERR 149 +++ F+ R Sbjct: 522 LRETFRGLR 530 >gi|116621653|ref|YP_823809.1| guanine deaminase [Candidatus Solibacter usitatus Ellin6076] gi|116224815|gb|ABJ83524.1| Guanine deaminase [Candidatus Solibacter usitatus Ellin6076] Length = 154 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 43/120 (35%), Positives = 56/120 (46%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM A+E A R P A+ V + +I+ N+ D TAHAEI+AIR CR Sbjct: 3 NTFMQQAIEMAVANVRRGGGPFAALVVKDGIVIASGANQVTRSNDPTAHAEIVAIREACR 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 +L LP ++Y T EPC MC AI AR +YY A++ F H Sbjct: 63 VLGDFQLPGCEIYTTCEPCPMCLGAIYWARPAAVYYAATHQAAALAGFDDSFIYHEIQHP 122 >gi|332285213|ref|YP_004417124.1| cytosine deaminase [Pusillimonas sp. T7-7] gi|330429166|gb|AEC20500.1| cytosine deaminase [Pusillimonas sp. T7-7] Length = 145 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 12/145 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EA+ IP+G+V V II R NR + H E+ A+ R Sbjct: 2 DDFMKAAIQEARLGLQEGGIPIGSVLVHQGTIIGRGHNRRVQCGSTILHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + E LY TL PC MC AI L I ++ G + GG Sbjct: 62 QPAS-VYRESVLYTTLSPCPMCTGAILLYGIPKVVIGENQTFMGG----------EALLG 110 Query: 125 SPEIYPGISEQR-SRQIIQDFFKER 148 + ++ + + +++DF K + Sbjct: 111 AQDVELQVLQDETCIALMRDFIKAK 135 >gi|256374328|ref|YP_003097988.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827] gi|255918631|gb|ACU34142.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827] Length = 160 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 2/128 (1%) Query: 23 EIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80 +IP+GA V + ++RA N L D TAHAE+LA+R + L L VT+ Sbjct: 23 DIPIGAAVFGPDGAELARACNARERLGDPTAHAEVLALRAAAAVFGDGWRLGGCTLAVTV 82 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA A+ LAR+ R+ +GA PK G + +H E+ G+ E + Sbjct: 83 EPCAMCAGALVLARVDRVVFGAWEPKTGAAGSLWDVVRDRRLNHRAEVVGGVREAECAAL 142 Query: 141 IQDFFKER 148 ++DFF R Sbjct: 143 MRDFFAGR 150 >gi|152966037|ref|YP_001361821.1| CMP/dCMP deaminase zinc-binding [Kineococcus radiotolerans SRS30216] gi|151360554|gb|ABS03557.1| CMP/dCMP deaminase zinc-binding [Kineococcus radiotolerans SRS30216] Length = 161 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 37/131 (28%), Positives = 53/131 (40%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A+E A P GAV V ++++ NR D TAHAE+ AIR CR+ Sbjct: 11 HFLERAVELATKNVAEGGGPFGAVLVRGGELLAAGQNRVTRDNDPTAHAEVQAIREACRL 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L LY + EPC MC A+ AR+ R+ Y A + + Sbjct: 71 TGTFSLHGTTLYSSCEPCPMCLASSLWARVDRVVYAADRDDAARGGFDDRTFYELFSTDR 130 Query: 126 PEIYPGISEQR 136 + +Q Sbjct: 131 ASWSTPVLQQE 141 >gi|153808000|ref|ZP_01960668.1| hypothetical protein BACCAC_02286 [Bacteroides caccae ATCC 43185] gi|149129609|gb|EDM20823.1| hypothetical protein BACCAC_02286 [Bacteroides caccae ATCC 43185] Length = 156 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 52/121 (42%), Gaps = 2/121 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAI 59 M K + M A+E ++ P GAV I++ NR D TAHAE+ AI Sbjct: 1 MTKEEL-MRKAIELSKENVENGGGPFGAVIATKEGVIVATGVNRVTTSCDPTAHAEVSAI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R L L ++Y + EPC MC AI AR+ ++YYG + I F Sbjct: 60 RAAAAKLGTFDLSGYEIYTSCEPCPMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYD 119 Query: 120 A 120 Sbjct: 120 E 120 >gi|313680072|ref|YP_004057811.1| tRNA(ile)-lysidine synthetase [Oceanithermus profundus DSM 14977] gi|313152787|gb|ADR36638.1| tRNA(Ile)-lysidine synthetase [Oceanithermus profundus DSM 14977] Length = 522 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 7/148 (4%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL A+ AA R E+P+GAV V + + + N + TAHAE+LA+R Sbjct: 378 EEDQRWMRRALALAREAARRGEVPIGAVVVREGEELGASANAVEARVNATAHAELLALRA 437 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 +++LP LYVTLEPC MC A+ AR+ R+ + NPK G + T++ A+ Sbjct: 438 AQERAGEKVLPGATLYVTLEPCPMCLGALIEARVGRVVWATENPKAGAV---TRYGMDAS 494 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 E+ G + S +++ FF + R Sbjct: 495 L----ELEGGRLARESAMLLKGFFADLR 518 >gi|299139283|ref|ZP_07032459.1| Guanine deaminase [Acidobacterium sp. MP5ACTX8] gi|298598963|gb|EFI55125.1| Guanine deaminase [Acidobacterium sp. MP5ACTX8] Length = 157 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 1/113 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M+ FM A++ A + + P GAV V + K+I+ N+ D TAHAE+ AI Sbjct: 1 MQGNPEFMQQAIQLATDNVVSGRGGPFGAVVVKDGKVIATGANQVTATNDPTAHAEVTAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 R C L L D+Y + EPC MC AA+ +R R +YYG S + Sbjct: 61 RNACTALGHFQLDGCDVYSSCEPCPMCLAALYWSRCRAIYYGNSAADAAKVGF 113 >gi|312078286|ref|XP_003141672.1| tRNA-specific adenosine deaminase 2 [Loa loa] gi|307763164|gb|EFO22398.1| tRNA-specific adenosine deaminase 2 [Loa loa] Length = 205 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 48/154 (31%), Positives = 85/154 (55%), Gaps = 8/154 (5%) Query: 1 MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + + V F++ A E A +A L NE+PVG V V + ++ N K+ T HAE++A+ Sbjct: 20 LNEDEVHFLNRAFEIAVDAVLNNEVPVGCVFVFEGQEVAFGRNDVNRTKNPTYHAEMVAL 79 Query: 60 RMGCRILSQ------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 M + +++ LYVTLEPC MCA+A+ R++++ YGA+N + GG+ + Sbjct: 80 EMMKQWCMDNGHELEDVMRRSTLYVTLEPCIMCASALYHLRLKKILYGAANERFGGLLSV 139 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 H EI P +S R+ +++++F+++ Sbjct: 140 GTR-EKYGAEHFIEILPNLSVDRAVKLLKEFYEK 172 >gi|283779562|ref|YP_003370317.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM 6068] gi|283438015|gb|ADB16457.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM 6068] Length = 160 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Query: 4 GNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + F+ A+E A+ P G+V V KII R NR D +AHAEI+AIR Sbjct: 7 DHEFLEAAIELARENVRSGKGGPFGSVVVKEGKIIGRGENRVTSSLDPSAHAEIVAIRDA 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 C+ L +Y + +PC MC +AI +RI R+ + Sbjct: 67 CQQQQNFSLAGTTIYASCQPCPMCLSAIYWSRIDRVVF 104 >gi|294495546|ref|YP_003542039.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii DSM 5219] gi|292666545|gb|ADE36394.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii DSM 5219] Length = 150 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 1/97 (1%) Query: 8 MSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+E+A+ N P GAV V + +ISRA NR + D TAHAEI+AIR+ L Sbjct: 1 MEIAIEQARLGMRNNLGGPFGAVIVKDETVISRAHNRVLDSNDPTAHAEIMAIRIASSKL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L E ++Y T PC MC +A+ ARI+ LYYG + Sbjct: 61 GTFDLSECEIYTTSYPCPMCMSALYWARIKTLYYGTT 97 >gi|134045717|ref|YP_001097203.1| cytosine deaminase [Methanococcus maripaludis C5] gi|132663342|gb|ABO34988.1| Cytosine deaminase [Methanococcus maripaludis C5] Length = 145 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 18/145 (12%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ AL+EA+ IP+GAV V N+II R NR + HAE+ A+ R L Sbjct: 4 FIDEALKEAKLGLEEGGIPIGAVLVYKNEIIGRGHNRRVQNNSAILHAEMDALENAGR-L 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTLATC 122 + ++ +LY TL PC MC+ A+ L +I+++ G + G I+NG Sbjct: 63 TSDVYKNCELYTTLSPCIMCSGAVLLYKIKKVIIGENETFLGAENLLIKNGVD------- 115 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKE 147 E+ ++++R ++++DF K Sbjct: 116 ---VEV---LNDERCVKMMEDFIKN 134 >gi|49075844|gb|AAT49501.1| PA2499 [synthetic construct] Length = 152 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 34/109 (31%), Positives = 51/109 (46%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A+ A+ P GAV V + ++++R N+ E D +AHAE+ AIR Sbjct: 2 SDETFMREAIALARANVEAGGRPFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 + L L +Y + PC MC AA+ L I+ ++ SN G Sbjct: 62 SQALGSPRLDGCVIYASGHPCPMCLAAMHLCGIQAAWFAYSNEDGEAFG 110 >gi|15597695|ref|NP_251189.1| deaminase [Pseudomonas aeruginosa PAO1] gi|296389082|ref|ZP_06878557.1| putative deaminase [Pseudomonas aeruginosa PAb1] gi|9948552|gb|AAG05887.1|AE004677_4 probable deaminase [Pseudomonas aeruginosa PAO1] Length = 151 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 34/109 (31%), Positives = 51/109 (46%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A+ A+ P GAV V + ++++R N+ E D +AHAE+ AIR Sbjct: 2 SDETFMREAIALARANVEAGGRPFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 + L L +Y + PC MC AA+ L I+ ++ SN G Sbjct: 62 SQALGSPRLDGCVIYASGHPCPMCLAAMHLCGIQAAWFAYSNEDGEAFG 110 >gi|15241124|ref|NP_198157.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis thaliana] gi|14532498|gb|AAK63977.1| AT5g28050/F15F15_120 [Arabidopsis thaliana] gi|22137296|gb|AAM91493.1| AT5g28050/F15F15_120 [Arabidopsis thaliana] gi|332006385|gb|AED93768.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis thaliana] Length = 185 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + F++ A+EEA + P GAV V NN++++ N + D TAHAE+ AIR Sbjct: 28 DSDHKFLTQAVEEAYKGVDCGDGGPFGAVIVHNNEVVASCHNMVLKYTDPTAHAEVTAIR 87 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L++ L E ++Y + EPC MC AI L+R++RL YGA I Sbjct: 88 EACKKLNKIELSECEIYASCEPCPMCFGAIHLSRLKRLVYGAKAEAAIAIGF 139 >gi|325104971|ref|YP_004274625.1| Guanine deaminase [Pedobacter saltans DSM 12145] gi|324973819|gb|ADY52803.1| Guanine deaminase [Pedobacter saltans DSM 12145] Length = 158 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 1/117 (0%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 K+ FM+ A+E+A P G+V V N KIIS GN + D TAHAEI AIR Sbjct: 4 KEQREFMNLAIEKASENVKTGKGGPFGSVIVKNGKIISATGNTVNKTCDPTAHAEIAAIR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + C+ L L ++Y + EPC MC +AI A+I +LYY A+ F Sbjct: 64 LACQELKSVTLEGCEIYASCEPCPMCLSAIYWAKIDKLYYAATKEDASEAGFDDTFL 120 >gi|330957624|gb|EGH57884.1| cytosine deaminase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 145 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EA+ IP+G+V V + KII R NR + T H E+ A+ R Sbjct: 2 DAFMQAAIDEARLGLDEGGIPIGSVIVHDGKIIGRGHNRRVQEGSPTRHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + + LY TL PC MC+ AI L IR + G + G E Sbjct: 62 QPAS-VYRDAVLYTTLSPCAMCSGAILLYGIRTVIVGENQSFMGEEE----LLRSRGV-- 114 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 S E+ + + ++Q F K + Sbjct: 115 SIEV---LDNAECKDMMQGFIKSK 135 >gi|327394833|dbj|BAK12255.1| tRNA-specific adenosine deaminase TadA [Pantoea ananatis AJ13355] Length = 98 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 39/87 (44%), Positives = 51/87 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL AQ A + E+PVGAV V +++I NR D TAHAEI+A+R Sbjct: 11 EQDEYWMRRALTLAQRAWEQGEVPVGAVLVQGDRVIGEGWNRPIGQHDPTAHAEIMALRQ 70 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAA 88 G ++L L LYVTLEPC MCA Sbjct: 71 GGKVLENYRLLNTTLYVTLEPCIMCAG 97 >gi|88812724|ref|ZP_01127970.1| guanine deaminase [Nitrococcus mobilis Nb-231] gi|88789962|gb|EAR21083.1| guanine deaminase [Nitrococcus mobilis Nb-231] Length = 156 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 4/144 (2%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM A++ + + P GAV V + +++ NR D TAHAE++AIR Sbjct: 2 DHAAFMRRAIDLSYEKMIAGIGGPFGAVIVHDGCVVAEGWNRVWSAMDPTAHAEVVAIRR 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA- 120 CRIL L + +Y + EPC MC AI AR++ +YY + I F Sbjct: 62 ACRILETYQLADCSIYTSCEPCPMCLGAIYWARLQVIYYANTRDDAAAIGFDDSFVYDEL 121 Query: 121 --TCHHSPEIYPGISEQRSRQIIQ 142 + + + + + Sbjct: 122 ALPLNQRRIPTRRLLGNEAMAVFR 145 >gi|107101945|ref|ZP_01365863.1| hypothetical protein PaerPA_01002992 [Pseudomonas aeruginosa PACS2] gi|254235497|ref|ZP_04928820.1| hypothetical protein PACG_01415 [Pseudomonas aeruginosa C3719] gi|254240930|ref|ZP_04934252.1| hypothetical protein PA2G_01610 [Pseudomonas aeruginosa 2192] gi|126167428|gb|EAZ52939.1| hypothetical protein PACG_01415 [Pseudomonas aeruginosa C3719] gi|126194308|gb|EAZ58371.1| hypothetical protein PA2G_01610 [Pseudomonas aeruginosa 2192] Length = 151 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 34/109 (31%), Positives = 52/109 (47%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +FM A+ A+ P GAV V + ++++R N+ E D +AHAE+ AIR Sbjct: 2 SDEIFMREAIALARANVEAGGRPFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 + L L +Y + PC MC AA+ L I+ ++ SN G Sbjct: 62 SQALGSPRLDGCVIYASGHPCPMCLAAMHLCGIQAAWFAYSNEDGEAFG 110 >gi|89519331|gb|ABD75808.1| putative cytosine/adenosine deaminase [uncultured bacterium] Length = 163 Score = 141 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 45/142 (31%), Positives = 66/142 (46%), Gaps = 4/142 (2%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ AL+EA+ A +R + P+GAV V II+R+ NR L+ AHAE AI Sbjct: 9 DHEKYMAEALKEAELAGIRGDKPIGAVIVHGGNIIARSSNRFHTLQSPVAHAETTAI-FA 67 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C ++ E LY T+EPC MC I +A IR + +G + T Y Sbjct: 68 CAPYLEQYKGECTLYTTVEPCVMCLGTIVIAGIRHIVFGVKDKFMQMDAYFTHPYIRKKV 127 Query: 123 HHSPEIYPGISEQRSRQIIQDF 144 HH + Q++Q + Sbjct: 128 HHYV---GDVLRDECVQVLQKY 146 >gi|190893255|ref|YP_001979797.1| purine deaminase [Rhizobium etli CIAT 652] gi|190698534|gb|ACE92619.1| putative purine deaminase protein [Rhizobium etli CIAT 652] Length = 158 Score = 141 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 6/151 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M+ F+ A+ +++A + P G+V V N ++I RA N D+T HAE+ + Sbjct: 1 MENHEPFLREAIALSRSAIEQGGGEPFGSVLVKNGEVILRAENSVFSGHDMTNHAEMNLV 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYT 118 ++ + L + LY + EPC MC+ AI + I + + S + G I G + Sbjct: 61 KLAAQHYDTAFLADCTLYTSTEPCAMCSGAIYWSGIGHMVFACSETRLGEIAGIGLNVPS 120 Query: 119 LATCHHSPEIYPGI----SEQRSRQIIQDFF 145 + + E + ++ Q+F+ Sbjct: 121 RPVLQTGARLVTVVGPTSLEDEAAEVHQEFW 151 >gi|254411343|ref|ZP_05025120.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Microcoleus chthonoplastes PCC 7420] gi|196181844|gb|EDX76831.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Microcoleus chthonoplastes PCC 7420] Length = 143 Score = 141 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 12/144 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM+ A+ +A+ IP+G+V V +II + N+ + D HAEI +R R Sbjct: 2 DEFMAAAIAQAKQGLREGGIPIGSVLVKEGQIIGQGYNKRVQDNDPVTHAEIDCLRHAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 I + LY TL PC +CA A+ I+++ G S G E H Sbjct: 62 IG---NYNDTILYSTLMPCYLCAGAVVQFGIKKVIAGESQTFAGAREFMES--------H 110 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 E+ ++ + +Q++ DF ++ Sbjct: 111 GVEVVD-LNLEECQQMMSDFIQQH 133 >gi|199598355|ref|ZP_03211775.1| Cytosine/adenosine deaminase [Lactobacillus rhamnosus HN001] gi|199590808|gb|EDY98894.1| Cytosine/adenosine deaminase [Lactobacillus rhamnosus HN001] Length = 155 Score = 141 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Query: 7 FMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ A EEA+ + P G V V N ++ISRA N+ D TAH EI AIR + Sbjct: 6 FMAMADEEAKANVNGSDGGPFGCVIVKNGQVISRAHNQVLVDHDPTAHGEITAIRKAGQA 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 L L +LY + PC MC +AI A I+++YYG + I Sbjct: 66 LGTHDLSGCELYTSAMPCPMCLSAIIWANIKQVYYGNTADDAAAIGF 112 >gi|255542370|ref|XP_002512248.1| Guanine deaminase, putative [Ricinus communis] gi|223548209|gb|EEF49700.1| Guanine deaminase, putative [Ricinus communis] Length = 211 Score = 141 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F++ A+EEA + P GAV V N++I+ N + D TAHAE+ A+R Sbjct: 54 NRDHKFLTRAVEEAYKGVECGDGGPFGAVVVRNDEIVVSCHNMVLKHTDPTAHAEVTAVR 113 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L + L + ++Y + EPC MC AI L+RI+RL YGA I F A Sbjct: 114 EACKKLDRIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF-DDFIADA 172 >gi|258508144|ref|YP_003170895.1| guanine deaminase [Lactobacillus rhamnosus GG] gi|258539359|ref|YP_003173858.1| guanine deaminase [Lactobacillus rhamnosus Lc 705] gi|257148071|emb|CAR87044.1| Guanine deaminase [Lactobacillus rhamnosus GG] gi|257151035|emb|CAR90007.1| Guanine deaminase [Lactobacillus rhamnosus Lc 705] gi|259649462|dbj|BAI41624.1| deaminase [Lactobacillus rhamnosus GG] Length = 155 Score = 141 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Query: 7 FMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ A EEA+ + P G V V N +++SRA NR D TAH EI AIR + Sbjct: 6 FMAMADEEAKANVNGSDGGPFGCVIVKNGQVVSRAHNRVLVDHDPTAHGEITAIRKAGQA 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 L L +LY + PC MC +AI A I+++YYG + I Sbjct: 66 LGTHDLSGCELYTSAMPCPMCLSAIIWANIKQVYYGNTADDAAAIGF 112 >gi|116050443|ref|YP_790738.1| putative deaminase [Pseudomonas aeruginosa UCBPP-PA14] gi|115585664|gb|ABJ11679.1| putative deaminase [Pseudomonas aeruginosa UCBPP-PA14] Length = 151 Score = 141 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 34/109 (31%), Positives = 51/109 (46%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A+ A+ P GAV V + ++++R N+ E D +AHAE+ AIR Sbjct: 2 SDETFMREAIALARANVEAGGRPFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 + L L +Y + PC MC AA+ L I+ ++ SN G Sbjct: 62 SQALGSPHLDGCVIYASGHPCPMCLAAMHLCGIQAAWFAYSNEDGEAFG 110 >gi|328463817|gb|EGF35361.1| guanine deaminase [Lactobacillus rhamnosus MTCC 5462] Length = 127 Score = 141 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Query: 7 FMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ A EEA+ + P G V V N ++ISRA N+ D TAH EI AIR + Sbjct: 6 FMAMANEEAKANVNGSDGGPFGCVIVKNGQVISRAHNQVLVDHDPTAHGEITAIRKAGQA 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 L L +LY + PC MC +AI A I+++YYG + I Sbjct: 66 LGTHDLSGCELYTSAMPCPMCLSAIIWANIKQVYYGNTADDAAAIGF 112 >gi|308177840|ref|YP_003917246.1| nucleoside deaminase-like protein [Arthrobacter arilaitensis Re117] gi|307745303|emb|CBT76275.1| nucleoside deaminase-like protein [Arthrobacter arilaitensis Re117] Length = 156 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 1/114 (0%) Query: 4 GNVFMSCALEEAQNAALRNE-IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 M A++++ A ++ P GAV VL K+IS A N D TAHAEI AIR Sbjct: 3 DPQLMQAAIDQSLLALEADDSGPFGAVVVLEGKVISAACNSVVGSMDPTAHAEINAIRAA 62 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 ++L L E +LY + EPC MC AI +R + +Y+ + + I F Sbjct: 63 GQVLGSFDLSECELYTSCEPCPMCLGAIYWSRFKHVYFANNREEAAAIGFDDDF 116 >gi|240168511|ref|ZP_04747170.1| hypothetical protein MkanA1_04312 [Mycobacterium kansasii ATCC 12478] Length = 152 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 49/129 (37%), Positives = 69/129 (53%), Gaps = 2/129 (1%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80 ++P+GAV V + +SRA N L D TAHAEILA+R +L L L VT+ Sbjct: 22 DVPIGAVVVGADGTELSRAVNAREALGDPTAHAEILALRAAAAVLGDGWRLEGTTLAVTV 81 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPCTMCA A+ LAR+ RL +GA PK G + + +H P++ G+ Sbjct: 82 EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPQVRGGVLAADCAAP 141 Query: 141 IQDFFKERR 149 ++ FF +R Sbjct: 142 LEGFFARQR 150 >gi|297570087|ref|YP_003691431.1| CMP/dCMP deaminase zinc-binding protein [Desulfurivibrio alkaliphilus AHT2] gi|296926002|gb|ADH86812.1| CMP/dCMP deaminase zinc-binding protein [Desulfurivibrio alkaliphilus AHT2] Length = 173 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 10/153 (6%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA---HAEILA 58 ++ + FM ALE+A+ A E PVGAV V ++++ NR HAEI+A Sbjct: 5 EQHHYFMGLALEQARVALQAGEFPVGAVIVAGGRVVAEG-NRQNSGGTAPTELDHAEIVA 63 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +R + + LY T+EPC MC A + L +RR+ Y + GGG Sbjct: 64 LRGLLARQPEIERGGLTLYATMEPCLMCYATLLLNGVRRIVYAYEDAMGGG--TSLPLTE 121 Query: 119 LATCH----HSPEIYPGISEQRSRQIIQDFFKE 147 L + + EI P I + S + QDFF+ Sbjct: 122 LNPLYREMAPAVEITPHIRRRESLALFQDFFRR 154 >gi|218460046|ref|ZP_03500137.1| CMP/dCMP deaminase zinc-binding protein [Rhizobium etli Kim 5] Length = 187 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 5/150 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ F+ A+ +++A + P G+V V + +I RA N D+T HAE+ ++ Sbjct: 1 MENHEPFLREAIALSKSAMANGDEPFGSVLVRDGDVILRAENSVFTGHDMTNHAEMNLVK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTL 119 + + L + LY + EPC MC+ AI + I + + S + G I G + Sbjct: 61 LAAKHYDPAFLADCTLYTSTEPCAMCSGAIYWSGIGHMVFACSETRLGEIAGIGLNVPSR 120 Query: 120 ATCHHSPEIYPGI----SEQRSRQIIQDFF 145 A + E + ++ Q+F+ Sbjct: 121 AVLQSGARTVTVVGPTNLEDEAAEVHQEFW 150 >gi|160883688|ref|ZP_02064691.1| hypothetical protein BACOVA_01660 [Bacteroides ovatus ATCC 8483] gi|260170907|ref|ZP_05757319.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. D2] gi|293369917|ref|ZP_06616489.1| guanine deaminase [Bacteroides ovatus SD CMC 3f] gi|299146282|ref|ZP_07039350.1| guanine deaminase [Bacteroides sp. 3_1_23] gi|315919237|ref|ZP_07915477.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156110773|gb|EDO12518.1| hypothetical protein BACOVA_01660 [Bacteroides ovatus ATCC 8483] gi|292634999|gb|EFF53519.1| guanine deaminase [Bacteroides ovatus SD CMC 3f] gi|298516773|gb|EFI40654.1| guanine deaminase [Bacteroides sp. 3_1_23] gi|313693112|gb|EFS29947.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 156 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 2/121 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M + ++ M A+E ++ P GAV +I++ NR D TAHAE+ AI Sbjct: 1 MTREDL-MRKAIELSKENVENGGGPFGAVIATKEGEIVATGVNRVTASCDPTAHAEVSAI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R L L ++Y + EPC MC AI AR+ ++YYG + I F Sbjct: 60 RAAAAKLGTFNLSGYEIYTSCEPCPMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYD 119 Query: 120 A 120 Sbjct: 120 E 120 >gi|257080390|ref|ZP_05574751.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|256988420|gb|EEU75722.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] Length = 158 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 4/151 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K+ F+ A+ A+ + + P GA+ V +N I+ N+ D T HAE IR Sbjct: 5 KQDERFIMQAISLAEASKNQGNEPFGAILVKDNTIVFTNENQIHIKSDPTFHAEHGLIRE 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS----NPKGGGIENGTQFY 117 C+ L E LY + EPC MC+ AI +++ RL + A + G E Sbjct: 65 FCQKYKITDLSEYTLYSSCEPCFMCSGAIVWSKLGRLVFSAYAKDLDSILGEKEESPCLL 124 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 P++ G+ + QI++D+F + Sbjct: 125 VFEHSVWKPQVSGGVLRDKGVQILKDYFSDH 155 >gi|158523013|ref|YP_001530883.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3] gi|158511839|gb|ABW68806.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3] Length = 168 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 2/146 (1%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK--DVTAHAEILAIR 60 FM+ AL++A+ A E PVG V +++ + + T HAEI+A+R Sbjct: 2 DHQHFMTIALKQARQALDAGEFPVGCVIADGKTVVATGARQGTRQNRFNETDHAEIVALR 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + LY TLEPC MC AI + I ++ YG + GGG Sbjct: 62 NLATLDPAPDRAGLVLYSTLEPCLMCFGAILIHGISKIVYGCEDMMGGGTGCDLSALPPL 121 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 EI G+ +S + + FF+ Sbjct: 122 YREKRVEILAGVMRAQSLALFKAFFQ 147 >gi|297582578|ref|YP_003698358.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens MLS10] gi|297141035|gb|ADH97792.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens MLS10] Length = 152 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 5/149 (3%) Query: 1 MKKGN-VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M+K FM A++ A+ A P GA+ V + +++ R N D T HAE+ I Sbjct: 1 MEKTEAYFMKQAIDLAKRAREEGNEPFGAILVKDGEVVMRGANHIHSGSDPTFHAELGLI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGGIENGTQ 115 R C L E LY + EPC MC+ A+ A + ++ Y S+ + GG Sbjct: 61 RAYCSAYQVSDLSEYTLYTSCEPCVMCSGAMVWANLGKVVYSVSHDQLAEIAGGNIMIAC 120 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + PE+ I + Q+ + + Sbjct: 121 RDVFQKSPNRPEVEGPICPEEGLQVFEGY 149 >gi|222445686|ref|ZP_03608201.1| hypothetical protein METSMIALI_01327 [Methanobrevibacter smithii DSM 2375] gi|222435251|gb|EEE42416.1| hypothetical protein METSMIALI_01327 [Methanobrevibacter smithii DSM 2375] Length = 158 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 12/145 (8%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M F++ AL EA+ + IP+GAV V + KIISR NR + V HAEI I Sbjct: 1 MYDDTYFINEALNEAKKSLAEGGIPIGAVLVKDGKIISRGHNRLIQNDSVILHAEIDTIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R+ ++ L LY TL PC MC+ AI L I ++ G + G + Sbjct: 61 NAGRLNHEDYLQ-SVLYTTLSPCPMCSGAILLYNIPKVVIGENTTLMGAECLLEK----- 114 Query: 121 TCHHSPEIYPGISEQ-RSRQIIQDF 144 + E+ + +++ + + Sbjct: 115 ---NGVEVV--VLNNLECKKLFEKY 134 >gi|312794193|ref|YP_004027116.1| riboflavin biosynthesis protein ribd [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181333|gb|ADQ41503.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor kristjanssonii 177R1B] Length = 371 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 18/152 (11%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ ALE A+ A + VG V V N II + ++ K HAE+LAI Sbjct: 5 SHSYYMNMALELAKKASPLVLPNPRVGCVIVKNGTIIGKGYHQKYGEK----HAEVLAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 I + +L +YV+LEPC C AI + I+++ +P NG Sbjct: 61 DA--IKNGYLLKNATMYVSLEPCCHFGKQPPCTEAIIKSGIKKVVVATRDPNPLVNGNGI 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q H E+ G+ ++ + I +DFFK Sbjct: 119 QILKQ----HGIEVVEGVLQKEAESINKDFFK 146 >gi|313107393|ref|ZP_07793584.1| putative deaminase [Pseudomonas aeruginosa 39016] gi|310880086|gb|EFQ38680.1| putative deaminase [Pseudomonas aeruginosa 39016] Length = 151 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 51/105 (48%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A+ A+ P GAV V + ++++R N+ E D +AHAE+ AIR Sbjct: 2 SDETFMREAIALARANVEAGGRPFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 + L L +Y + PC MC AA+ L I+ ++ SN G Sbjct: 62 SQALGSPRLDGCVIYASGHPCPMCLAAMHLCGIQAAWFAYSNEDG 106 >gi|187250528|ref|YP_001875010.1| cytosine/adenosine deaminase [Elusimicrobium minutum Pei191] gi|186970688|gb|ACC97673.1| Cytosine/adenosine deaminase [Elusimicrobium minutum Pei191] Length = 163 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 3/115 (2%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 K F+ A++ A+ P GAV V + K++++ NR D + HAE+ AIR Sbjct: 8 KLHIKFLRAAVKMAEKGVKAGKGGPFGAVIVKDGKMVAKGYNRVTSSNDPSLHAEVDAIR 67 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 C+ L L +Y + EPC MC AI AR + LY+ A K + G Sbjct: 68 KACKKLGSFELTGCIIYSSCEPCPMCLGAIYWARPKALYFAA--DKHTAAKYGFD 120 >gi|18266045|gb|AAL67435.1|AF458409_1 deoxycytidine deaminase [Brassica oleracea] Length = 185 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + F++ A+EEA + P GAV V N++++ N + D TAHAE+ AIR Sbjct: 28 DSDHKFLTQAVEEAYKGVDCGDGGPFGAVIVHKNEVVASCHNMVLKYTDPTAHAEVTAIR 87 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L+Q L E ++Y + EPC MC AI L+R++RL YGA I Sbjct: 88 EACKKLNQIELSECEIYASCEPCPMCFGAIHLSRLKRLVYGAKAEAAIAIGF 139 >gi|261345369|ref|ZP_05973013.1| guanine deaminase [Providencia rustigianii DSM 4541] gi|282566412|gb|EFB71947.1| guanine deaminase [Providencia rustigianii DSM 4541] Length = 154 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 53/105 (50%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 N F+ A+ A P GAV V + +++ N+ E D TAHAE+LA+R Sbjct: 2 TDNQFLQQAILLATENVNAGGRPFGAVVVYDGSVVATGVNQMLERNDPTAHAELLALRQA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 +L + L + +Y + +PC MC AA+ +A I R+ Y SN Sbjct: 62 GEVLGKVRLDDCVVYASGQPCPMCLAAMRMAGISRIVYAYSNQDA 106 >gi|218891523|ref|YP_002440390.1| putative deaminase [Pseudomonas aeruginosa LESB58] gi|218771749|emb|CAW27523.1| probable deaminase [Pseudomonas aeruginosa LESB58] Length = 151 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 52/105 (49%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +FM A+ A+ P GAV V + ++++R N+ E D +AHAE+ AIR Sbjct: 2 SDEIFMREAIALARANVEAGGRPFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 + L L +Y + PC MC AA+ L I+ ++ SN G Sbjct: 62 SQALGSPRLDGCVIYASGHPCPMCLAAMHLCGIQAAWFAYSNEDG 106 >gi|91085973|ref|XP_971753.1| PREDICTED: similar to tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2, putative [Tribolium castaneum] Length = 160 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 9/145 (6%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A + A A E+PVG + V NN I+ N + K+ T HAEI I Sbjct: 1 MERAFQHAYEALAAQEVPVGCIFVHNNTEIAFGRNTVNQTKNATRHAEINCIEQVTDYCK 60 Query: 68 Q------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + V ++VT+EPC MC A+ +++ + +G N + GG T F Sbjct: 61 TNNFNLIDFFKGVTVFVTVEPCIMCINALFDLQVQTIVFGCRNDRFGG---RTVFDVAGV 117 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFK 146 H I G + ++++F+K Sbjct: 118 VHPKTIIKGGFRADEAMNLLKEFYK 142 >gi|308272592|emb|CBX29196.1| hypothetical protein N47_J01770 [uncultured Desulfobacterium sp.] Length = 172 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 49/152 (32%), Positives = 70/152 (46%), Gaps = 9/152 (5%) Query: 1 MK-KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL----KDVTAHAE 55 MK FM AL AQ A + E PVG V V +KII+ + + HAE Sbjct: 1 MKMDHEYFMEKALNLAQTALEQGEFPVGCVLVHKDKIIATG--KREGTAKSVLNEVDHAE 58 Query: 56 ILAIRM-GCRILSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 I+A+R EI E+ +Y T+EPC MC AI LA I ++ + + GGG Sbjct: 59 IIALRNLAGMKDYNEISRQEIIIYCTMEPCLMCFGAILLAGIGKIVFAYEDVMGGGTNCN 118 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 T+ + + I PG+ + S I + +F Sbjct: 119 TKDLSPLYKDNKISITPGVLRKESLNIFKMYF 150 >gi|281421106|ref|ZP_06252105.1| guanine deaminase [Prevotella copri DSM 18205] gi|281404641|gb|EFB35321.1| guanine deaminase [Prevotella copri DSM 18205] Length = 155 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 1/116 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K + M A+E ++N+ P GAV + II+ A N D TAHAE+ IR Sbjct: 1 MTKEEL-MHRAIELSKNSVKTGGGPFGAVIAKDGIIIAEASNSVTIDLDPTAHAEVNCIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 R L L ++Y + EPC MC AI A + R+YY I +F Sbjct: 60 QATRKLKTFNLEGCEIYTSCEPCPMCLGAIYWAHLDRIYYANDRKDAAKIGFDDEF 115 >gi|222624837|gb|EEE58969.1| hypothetical protein OsJ_10660 [Oryza sativa Japonica Group] Length = 169 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 32/159 (20%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 FM ALE+A+ A E+PVG V V + K T HAE+ AI + R Sbjct: 8 FMELALEQAKFALDNLEVPVGCVIVEDGK--------------ATRHAEMEAIDILLREW 53 Query: 67 SQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 E DLYVT EPC MCA A+S+ IR +Y+G +N K GG + + Sbjct: 54 QGMGLDQPQVAEKFARCDLYVTCEPCIMCAMALSILGIREVYFGCANDKFGGCGSIMSLH 113 Query: 118 TLATC---------HHSPEIYPGISEQRSRQIIQDFFKE 147 ++ + GI + + + ++F+++ Sbjct: 114 QSSSAELSGEEIPGPKGYKCTGGIMAEEAVALFRNFYEQ 152 >gi|297813065|ref|XP_002874416.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis lyrata subsp. lyrata] gi|297320253|gb|EFH50675.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis lyrata subsp. lyrata] Length = 185 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + F++ A+EEA + P GAV V +++++ N + D TAHAE+ AIR Sbjct: 28 DSDHKFLTQAVEEAYKGVDCGDGGPFGAVIVHKDEVVASCHNMVLKYTDPTAHAEVTAIR 87 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L++ L E ++Y + EPC MC AI L+R++RL YGA I Sbjct: 88 EACKKLNKIELSECEIYASCEPCPMCFGAIHLSRLKRLVYGAKAEAAIAIGF 139 >gi|313683576|ref|YP_004061314.1| cmp/dcmp deaminase zinc-binding protein [Sulfuricurvum kujiense DSM 16994] gi|313156436|gb|ADR35114.1| CMP/dCMP deaminase zinc-binding protein [Sulfuricurvum kujiense DSM 16994] Length = 152 Score = 140 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 42/110 (38%), Positives = 54/110 (49%), Gaps = 3/110 (2%) Query: 5 NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 N +M+ A +EA NE P GA V N +I+ A N + D TAHAEI IR Sbjct: 2 NTWMAIARDEALKGMDSNEGGPFGAAIVRNGSLIAAAHNEVLKSNDPTAHAEINVIRKAS 61 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA--SNPKGGGIE 111 L+ L + LY T PC MC AI ARI +YY + + GG + Sbjct: 62 EKLATYDLSDCVLYTTCYPCPMCLGAILWARIPTVYYASTMDDAARGGFD 111 >gi|17232126|ref|NP_488674.1| hypothetical protein alr4634 [Nostoc sp. PCC 7120] gi|17133771|dbj|BAB76333.1| alr4634 [Nostoc sp. PCC 7120] Length = 140 Score = 140 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 43/141 (30%), Positives = 62/141 (43%), Gaps = 8/141 (5%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+ EA+ + P GAV V +N++++ A N D +AHAEI IR Sbjct: 4 EYFMRLAIAEAKK----GDAPYGAVIVKDNQVVAFAHNTVARDNDPSAHAEINVIRRLTA 59 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFY---TLA 120 L L +Y T EPC MCAAA + I + YGAS ++ Q +A Sbjct: 60 QLQSFSLAGYSIYTTGEPCPMCAAACVWSGIAEIIYGASIQDLILANQSQIQISCEEVIA 119 Query: 121 TCHHSPEIYPGISEQRSRQII 141 + ++ GI Q + Sbjct: 120 KSLRNIKVTKGILRQECLNLF 140 >gi|152988290|ref|YP_001348100.1| putative deaminase [Pseudomonas aeruginosa PA7] gi|150963448|gb|ABR85473.1| probable deaminase [Pseudomonas aeruginosa PA7] Length = 151 Score = 140 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 36/103 (34%), Positives = 53/103 (51%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+ A+ P GAV V + ++++R N+ E D +AHAE+ AIR R Sbjct: 4 ETFMREAIALARANVEAGGRPFGAVLVRDGQVLARGVNQTHESHDPSAHAELQAIRQASR 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 +L L ++Y + PC MC AA+ L IR ++ SN G Sbjct: 64 LLGSPRLDGCEIYASGHPCPMCLAAMHLCGIRAAWFAYSNEDG 106 >gi|313682141|ref|YP_004059879.1| cmp/dcmp deaminase zinc-binding protein [Sulfuricurvum kujiense DSM 16994] gi|313155001|gb|ADR33679.1| CMP/dCMP deaminase zinc-binding protein [Sulfuricurvum kujiense DSM 16994] Length = 145 Score = 140 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 12/141 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL EAQ IP+G+V V N KII R NR + V H E+ A+ R Sbjct: 2 DPFMKEALLEAQKGLEEGGIPIGSVLVHNGKIIGRGHNRRIQKGSVILHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 LS + E LY TL PC MC+ AI+L I ++ G N G E + Sbjct: 62 -LSASLYKECTLYTTLSPCPMCSGAIALYGIPKVVVG-ENENFMGEE---ELLQSRG--- 113 Query: 125 SPEIYPGISEQR-SRQIIQDF 144 + + +++++F Sbjct: 114 ---VTIDVLNDHNCIEMMKNF 131 >gi|282163607|ref|YP_003355992.1| putative deaminase [Methanocella paludicola SANAE] gi|282155921|dbj|BAI61009.1| putative deaminase [Methanocella paludicola SANAE] Length = 154 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 6/147 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A+E+A+ ++P GA V + K++ A N K++TAHAEI I Sbjct: 2 NDEDYMRLAIEKAREGVRHGQLPFGACIVKDGKVVGCAHNTILRDKNLTAHAEINTIHEA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA--SNPKGGG---IENGTQFY 117 C + L +Y T EPC MC A+ LA I R+ YGA S+ K G ++ + + Sbjct: 62 CHVFDSLDLSGCTIYCTCEPCPMCLGALGLANIDRIVYGARISDVKMDGYVVLDTPGELF 121 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 ++ + ++ + + +++ Sbjct: 122 SIIG-DGKISARGNVLKEENLVLFREW 147 >gi|226504812|ref|NP_001140513.1| hypothetical protein LOC100272576 [Zea mays] gi|194699798|gb|ACF83983.1| unknown [Zea mays] gi|195610442|gb|ACG27051.1| cytidine/deoxycytidylate deaminase family protein [Zea mays] Length = 186 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F+S A+EEA + P GAV V N+++I N + D TAHAE+ AIR Sbjct: 29 DRDHKFLSKAVEEAYRGVDCGDGGPFGAVVVHNDEVIVSCHNMVLKNTDPTAHAEVTAIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L + L + ++Y + EPC MC A+ L+RI+RL YGA I Sbjct: 89 EACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140 >gi|217071302|gb|ACJ84011.1| unknown [Medicago truncatula] Length = 181 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F+ A+EEA + P GAV VLN+++I+ N D +AHAE+ AIR Sbjct: 24 DRDHKFLRKAVEEAYKGVECEDGGPFGAVIVLNDEVIASCHNMVLRNTDPSAHAEVTAIR 83 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L Q L E ++Y + EPC MC AI L+R++RL YGA I Sbjct: 84 EACKKLKQIELSECEIYASCEPCPMCFGAIHLSRVKRLVYGAKAEAAIAIGF 135 >gi|119511953|ref|ZP_01631050.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nodularia spumigena CCY9414] gi|119463373|gb|EAW44313.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nodularia spumigena CCY9414] Length = 143 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 8/141 (5%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM ALEEA+ + P GAV V + ++++ A N + D +AHAEI IR Sbjct: 4 EYFMQIALEEAKK----GDAPYGAVIVKHQEVVAVAHNTVKGNSDPSAHAEINVIRSLTA 59 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFY---TLA 120 L L +Y T EPC MCA A A I + YGAS + ++ +A Sbjct: 60 KLKSPSLEGYSIYTTGEPCPMCATACVWAGISEIVYGASIQDLISVNQSQIDITCEEVIA 119 Query: 121 TCHHSPEIYPGISEQRSRQII 141 + ++ GI + ++ Sbjct: 120 KSFRNIKVTRGILKHECLELF 140 >gi|304405271|ref|ZP_07386931.1| CMP/dCMP deaminase zinc-binding [Paenibacillus curdlanolyticus YK9] gi|304346150|gb|EFM11984.1| CMP/dCMP deaminase zinc-binding [Paenibacillus curdlanolyticus YK9] Length = 172 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 4/149 (2%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 ++M A++ A R E P GA V N+++I+ A NR KD T HAE++AIR C Sbjct: 9 DRMYMRQAVDCAMEGTQRMEFPFGACLVHNDRVIAIASNRCLSSKDPTMHAEMIAIREAC 68 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122 L + L + LY T EPC MC AI A I R+ YG + + + T Sbjct: 69 GTLDRASLQQATLYATTEPCVMCMGAIHWAGIPRIVYGLTIEDSMVLGFKEIQLSARTIA 128 Query: 123 -HHSPEIY--PGISEQRSRQIIQDFFKER 148 H + E+ G+ + +Q+ ++ + R Sbjct: 129 AHAAYEMTLKGGVLTEECQQLFHNWNRSR 157 >gi|22298002|ref|NP_681249.1| cytosine deaminase [Thermosynechococcus elongatus BP-1] gi|22294180|dbj|BAC08011.1| cytosine deaminase [Thermosynechococcus elongatus BP-1] Length = 193 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 12/143 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM+ A+ EA+ IP+G+V V + +II R N+ + HAEI + R Sbjct: 46 DEFMAAAIAEAEQGLQEGGIPIGSVLVRHGQIIGRGHNQRVQRGSPILHAEIDCLANAGR 105 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 I + LY TL PC +CA A+ I+++ G S G E H Sbjct: 106 IG---RYDDTVLYSTLMPCYLCAGAVVQFGIKKVIAGESQTFAGAREFMEA--------H 154 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 E+ ++ +R +Q+++DF + Sbjct: 155 GVEVID-LNLERCQQLMRDFIAQ 176 >gi|218516430|ref|ZP_03513270.1| putative purine deaminase protein [Rhizobium etli 8C-3] Length = 158 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 6/151 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M+ F+ A+ +++A + P G+V V N ++I RA N D+T HAE+ + Sbjct: 1 MENHEPFLREAIALSRSAIEQGGGEPFGSVLVKNGEVILRAENSVFSGHDMTNHAEMNLV 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYT 118 ++ + L + LY + EPC MC+ AI + I + + S + G I G + Sbjct: 61 KLAAQHYDTAFLADCTLYTSTEPCAMCSGAIYWSGIGHMVFACSETRLGEIAGIGLNVPS 120 Query: 119 LATCHHSPEIYPGI----SEQRSRQIIQDFF 145 A + + E + ++ Q+F+ Sbjct: 121 RAVLQTGARLVTVVGPTSLEDEAAEVHQEFW 151 >gi|256392662|ref|YP_003114226.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM 44928] gi|256358888|gb|ACU72385.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM 44928] Length = 223 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 4/121 (3%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + ++ A+ AQ+ P GAV V + +I+ N D TAHAE+LAIR CR Sbjct: 74 DDWLGQAIALAQDNVEAGGWPFGAVIVRDGAVIATGVNEVLADGDPTAHAEMLAIREACR 133 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN----GTQFYTLA 120 +L L LY + EPC MC AAI A + + Y A + Sbjct: 134 VLKDINLAGAVLYASCEPCPMCLAAIKWAGLTGIVYAADRESSARAGFPDKEIYDLFDQP 193 Query: 121 T 121 Sbjct: 194 R 194 >gi|218663270|ref|ZP_03519200.1| CMP/dCMP deaminase zinc-binding protein [Rhizobium etli IE4771] Length = 157 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 5/150 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ F+ A+ +++A + P G+V V + +I RA N D+T HAE+ ++ Sbjct: 1 MENHEPFLREAIALSKSAMANGDEPFGSVLVRDGDVILRAENSVFTGHDMTNHAEMNLVK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTL 119 + + L + LY + EPC MC+ AI + I + + S + G I G + Sbjct: 61 LAAKHYDPAFLADCTLYTSTEPCAMCSGAIYWSGIGHMVFACSETRLGEIAGIGLNVPSR 120 Query: 120 ATCHHSPEIYPGI----SEQRSRQIIQDFF 145 A + E + ++ Q+F+ Sbjct: 121 AVLQSGARAVTVVGPTSLEDEAAEVHQEFW 150 >gi|148243600|ref|YP_001228757.1| nucleoside deaminase [Synechococcus sp. RCC307] gi|147851910|emb|CAK29404.1| Nucleoside deaminase [Synechococcus sp. RCC307] Length = 163 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 44/122 (36%), Positives = 58/122 (47%), Gaps = 10/122 (8%) Query: 2 KKGNVFMSCALEEAQN-AALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + FM+ A+E ++ A E P GAV V + +I+ GN D TAHAEI A Sbjct: 5 DQHEQFMAQAIEISRQTALEERSGE-PFGAVIVRDGVVIAAEGNSVNGDSDPTAHAEINA 63 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 IR R L L LY + C MC A A IR++YYGA G E+ + FY Sbjct: 64 IRAAGRALGTWDLSGCVLYASSRCCPMCYGAAHWAGIRKIYYGA------GWEDYSDFYD 117 Query: 119 LA 120 + Sbjct: 118 DS 119 >gi|172038865|ref|YP_001805366.1| cytosine deaminase [Cyanothece sp. ATCC 51142] gi|171700319|gb|ACB53300.1| probable cytosine deaminase [Cyanothece sp. ATCC 51142] Length = 150 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 12/143 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A+ EA+ IP+G+V V +NKII R N+ + D HAEI +R R Sbjct: 9 DEFMKAAIAEAKQGLKTGGIPIGSVLVKHNKIIGRGHNKRVQDGDPITHAEIDCLRNAGR 68 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 I + LY TL PC +CA A+ I+++ G S G + H Sbjct: 69 IG---NYQDTVLYSTLMPCYLCAGAVVQFNIKKVIAGESKTFTGAKQFMES--------H 117 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 E+ + +++ F ++ Sbjct: 118 GVEVIDLDLA-ECQDLMKQFIEK 139 >gi|148643446|ref|YP_001273959.1| cytosine deaminase [Methanobrevibacter smithii ATCC 35061] gi|261349766|ref|ZP_05975183.1| cytosine deaminase [Methanobrevibacter smithii DSM 2374] gi|148552463|gb|ABQ87591.1| cytosine deaminase [Methanobrevibacter smithii ATCC 35061] gi|288860550|gb|EFC92848.1| cytosine deaminase [Methanobrevibacter smithii DSM 2374] Length = 158 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 12/145 (8%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M F++ AL+EA+ + IP+GAV V + KIISR NR + V HAEI I Sbjct: 1 MYDDTYFINEALKEAKKSLAEGGIPIGAVLVKDGKIISRGHNRLIQNDSVILHAEIDTIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R+ ++ L LY TL PC MC+ AI L I ++ G + G + Sbjct: 61 NAGRLNHEDYLQ-SVLYTTLSPCPMCSGAILLYNIPKVIIGENTTLMGAECLLEK----- 114 Query: 121 TCHHSPEIYPGISEQ-RSRQIIQDF 144 + E+ + +++ + + Sbjct: 115 ---NGVEVV--VLNNLECKKLFEKY 134 >gi|326428921|gb|EGD74491.1| tRNA-specific adenosine deaminase [Salpingoeca sp. ATCC 50818] Length = 191 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 9/147 (6%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+ EAQ A E+PVG V V +N + + N+ + T HAE++A Sbjct: 1 MEAAVAEAQRALAEGEVPVGCVFVDDNGNVQAAGRNQTNIEHNATRHAELVAFDDCVARC 60 Query: 67 S------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++I+ LYVT+EPC MCA A+ L + R+ +G N + GG + T Sbjct: 61 GGDVEKAKDIVASCTLYVTVEPCVMCAYALRLLGVTRVVFGCHNDRFGGCGSTMDVATCE 120 Query: 121 TCH--HSPEIYPGISEQRSRQIIQDFF 145 T ++ G R+ +++ F+ Sbjct: 121 TPDGLPKLQLEAGPMRTRAINLLKLFY 147 >gi|255625685|gb|ACU13187.1| unknown [Glycine max] Length = 186 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ + F+ A+EEA + P GA+ V N++I++R N D TAHAE+ IR Sbjct: 29 QRDHKFLRIAVEEAYKGVDCEDGGPFGAIIVCNDEIVARCHNMVLRNTDPTAHAEVTVIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C L+Q L + ++Y + EPC MC AI L+R++RL YGA I Sbjct: 89 KACEKLNQIELSDCEIYASCEPCPMCFGAIHLSRVKRLVYGAKAEAAIAIGF 140 >gi|294495182|ref|YP_003541675.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii DSM 5219] gi|292666181|gb|ADE36030.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii DSM 5219] Length = 147 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 14/144 (9%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A+ EA + IP+G+V V + II R N + D AHAEI +R R Sbjct: 2 DQFMKEAINEAMAGRDKGGIPIGSVLVRDGMIIGRGHNLRVQNDDPLAHAEISCMRDAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 I S + LY TL PC +CA A+ I+++ G S G F Sbjct: 62 IGS---YADTVLYSTLMPCYLCAGAVVQFGIKKVVVGESETFEGA----QDFLRSKG--- 111 Query: 125 SPEIYP-GISEQRSRQIIQDFFKE 147 E+ G+ + ++++F +E Sbjct: 112 -VEVVDLGL--SECKTLMKEFIRE 132 >gi|222528581|ref|YP_002572463.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor bescii DSM 6725] gi|222455428|gb|ACM59690.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor bescii DSM 6725] Length = 371 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 18/152 (11%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ ALE A+ A + VG V V N +I + ++ K HAE+LAI Sbjct: 5 SHSYYMNMALELAKKASPLVLPNPRVGCVIVKNGTVIGKGYHQKYGEK----HAEVLAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 I + +L +YVTLEPC C AI + I+++ +P G Sbjct: 61 DA--IKNGYLLKNATMYVTLEPCCHFGKQPPCTDAIIKSGIKKVVVATKDPNPLVNGKGI 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q H E+ G+ ++ + I +DFFK Sbjct: 119 QILKQ----HGIEVIEGVLQKEAESINKDFFK 146 >gi|146278266|ref|YP_001168425.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides ATCC 17025] gi|145556507|gb|ABP71120.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides ATCC 17025] Length = 114 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 64/112 (57%), Positives = 78/112 (69%), Gaps = 1/112 (0%) Query: 38 SRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 +RAGNR REL D TAHAE+LAIR C L E L DLYVTLEPC MCAAAIS ARI R Sbjct: 2 ARAGNRCRELSDPTAHAEMLAIRAACAELG-ERLTGCDLYVTLEPCPMCAAAISAARIAR 60 Query: 98 LYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 LYYGA++PK GG+ G + + CHH P++Y GI E+ + +++ FF RR Sbjct: 61 LYYGAADPKSGGVAQGARVFAHPQCHHVPDVYDGIREEEAAALLRGFFAARR 112 >gi|8778532|gb|AAF79540.1|AC023673_28 F21D18.9 [Arabidopsis thaliana] Length = 331 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 12/132 (9%) Query: 28 AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GCRILSQ--------EILPEVDLYV 78 V + + K+I+ NR E ++ T HAE+ AI + E + LYV Sbjct: 183 CVFLEDGKVIASGRNRTNETRNATRHAEMEAIDQLVGQWQKDGLSPSQVAEKFSKCVLYV 242 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY---TLATCHHSPEIYPGISEQ 135 T EPC MCA+A+S I+ +YYG N K GG + + A + GI + Sbjct: 243 TCEPCIMCASALSFLGIKEVYYGCPNDKFGGCGSILSLHLGSEEAQRGKGYKCRGGIMAE 302 Query: 136 RSRQIIQDFFKE 147 + + + F+++ Sbjct: 303 EAVSLFKCFYEQ 314 >gi|153008613|ref|YP_001369828.1| zinc-binding CMP/dCMP deaminase [Ochrobactrum anthropi ATCC 49188] gi|151560501|gb|ABS13999.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum anthropi ATCC 49188] Length = 156 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 34/107 (31%), Positives = 55/107 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M ++ A+ A + + P GAV V K+I+ NR + D TAHAE+LA+R Sbjct: 1 MSNDRTYLDQAIRLAFDNVEQGGRPFGAVVVKGGKVIATGVNRMQADCDPTAHAELLALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 + L L ++Y + +PC MC AA+ +A I ++ + SN + Sbjct: 61 AAGKTLQSPRLDGCEVYASGQPCPMCFAAMRMAGIEKIRFAYSNEQA 107 >gi|268317845|ref|YP_003291564.1| CMP/dCMP deaminase zinc-binding protein [Rhodothermus marinus DSM 4252] gi|262335379|gb|ACY49176.1| CMP/dCMP deaminase zinc-binding protein [Rhodothermus marinus DSM 4252] Length = 155 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 51/116 (43%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 F+ + A+ R P A+ V + ++++ NR D TAHAEI+AIR CR Sbjct: 4 EAFIREVIRLAEANVRRGGGPFAALVVRDGEVLAAGTNRVTTDNDPTAHAEIVAIREACR 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L DLY + EPC MC AI AR R++Y A+ Sbjct: 64 RLGHFQLTGCDLYTSCEPCPMCLGAIYWARPARVFYAATRHDAARAGFDDALIYDE 119 >gi|88604201|ref|YP_504379.1| CMP/dCMP deaminase, zinc-binding [Methanospirillum hungatei JF-1] gi|88189663|gb|ABD42660.1| CMP/dCMP deaminase, zinc-binding protein [Methanospirillum hungatei JF-1] Length = 274 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 12/145 (8%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + FM A++EA+ IP+G+V V + II R NR + D HAEI ++ Sbjct: 131 DDPFMEAAIQEAEKGKEEGGIPIGSVLVRDGVIIGRGHNRRVQNNDPMVHAEIDCLQNAG 190 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 RI S + LY TL PC +CA A+ I R+ G S G E Sbjct: 191 RIGS---YQDCILYSTLMPCFLCAGAVVQFHIPRVIVGESRTFSGAREFMEA-------- 239 Query: 124 HSPEIYPGISEQRSRQIIQDFFKER 148 H + R + +++ F +E+ Sbjct: 240 HGVTVIDYDL-NRCQMMMETFIREK 263 >gi|108763474|ref|YP_633568.1| putative guanine deaminase [Myxococcus xanthus DK 1622] gi|108467354|gb|ABF92539.1| putative guanine deaminase [Myxococcus xanthus DK 1622] Length = 153 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 38/107 (35%), Positives = 54/107 (50%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+ A+ P GA+ V + ++I+RA N + KD TAHAE+LAIR + Sbjct: 6 EEFMREAIALARTNVKSGGRPFGALLVRDGRVIARAVNEVNQTKDPTAHAELLAIRNASQ 65 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 L L +Y + PC MC AA+ L I+ Y+ SN +G Sbjct: 66 SLGSASLSGCVVYASGHPCPMCLAAMYLCGIQGAYFAYSNEEGEAFG 112 >gi|319956637|ref|YP_004167900.1| cmp/dcmp deaminase zinc-binding protein [Nitratifractor salsuginis DSM 16511] gi|319419041|gb|ADV46151.1| CMP/dCMP deaminase zinc-binding protein [Nitratifractor salsuginis DSM 16511] Length = 155 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 54/116 (46%), Gaps = 1/116 (0%) Query: 5 NVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 ++ A+ EA+ P GAV V +I+S A N D TAHAEILAIR+ Sbjct: 4 EEYLQIAIGEARKGVEAGHGGPFGAVIVYRGEIVSTAHNEVVLRNDPTAHAEILAIRLAG 63 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L + L LY T EPC MC +AI A + R+ Y + + I F T Sbjct: 64 EKLQRFHLNGCTLYCTGEPCPMCFSAIHWAHLDRVIYCNTKEEAAKIGFDDTFITE 119 >gi|312877999|ref|ZP_07737939.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor lactoaceticus 6A] gi|311795234|gb|EFR11623.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor lactoaceticus 6A] Length = 371 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 18/152 (11%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ A+ A + VG V V N II + ++ K HAE+LAI Sbjct: 5 SHSYYMNMALDLAKKASPLVLPNPRVGCVIVKNGTIIGKGYHQKYGEK----HAEVLAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 I + +L +YV+LEPC C AI + I+++ +P NG Sbjct: 61 DA--IKNGYLLKNATMYVSLEPCCHFGKQPPCTEAIIKSGIKKVVVATRDPNPLVNGNGI 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q H E+ G+ ++ + I +DFFK Sbjct: 119 QILKQ----HGIEVVEGVLQKEAESINKDFFK 146 >gi|94312654|ref|YP_585863.1| CMP/dCMP deaminase [Cupriavidus metallidurans CH34] gi|93356506|gb|ABF10594.1| CMP/dCMP deaminase [Cupriavidus metallidurans CH34] Length = 156 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 33/103 (32%), Positives = 52/103 (50%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 ++ A+E A+ + P GAV V + ++I+ N+ D TAHAE+ AIR + Sbjct: 7 ERYLGEAIELARTNLEQGGRPFGAVIVKDGEVIATGVNQILSTNDPTAHAELTAIRAASQ 66 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 L L +Y + PC MC AA+ +A ++ + Y SN G Sbjct: 67 KLGSPSLDGCAVYASGHPCPMCMAAMRMAGVKEVTYAYSNDDG 109 >gi|149538332|ref|XP_001507477.1| PREDICTED: similar to DEADC1 protein, partial [Ornithorhynchus anatinus] Length = 121 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 6/115 (5%) Query: 15 AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL------SQ 68 AQ A E+PVG + V NNKI+ N E K+ T HAE++AI Sbjct: 1 AQEALENGEVPVGCLMVYNNKIVGMGRNEVNETKNATRHAEMVAIDQVLNWCLRRGKNPT 60 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 E+ LYVT+EPC MCAAA+ + RI + YG N + GG + + + Sbjct: 61 EVFQRTVLYVTVEPCIMCAAALRIMRIPLVVYGCQNERFGGCGSVLNISSDDLPN 115 >gi|218295213|ref|ZP_03496049.1| tRNA(Ile)-lysidine synthetase [Thermus aquaticus Y51MC23] gi|218244416|gb|EED10941.1| tRNA(Ile)-lysidine synthetase [Thermus aquaticus Y51MC23] Length = 509 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 69/148 (46%), Gaps = 16/148 (10%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M ALEEA+ A E+PVGAV VL ++ NR ++D TAHAE+L +R Sbjct: 372 SEEEGLMGLALEEARKAYAEGEVPVGAVLVLEGEVHGE-RNRVEAMEDPTAHAEMLLLRK 430 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L YVTLEPC MC A+ A + + YG N K G + Q + Sbjct: 431 LGKRARGGRL-----YVTLEPCRMCHHALMEAGV-EVVYGVENLKEGALTRYGQGGRMR- 483 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149 G+ E ++++DFF R Sbjct: 484 --------GGLREGECAKLLRDFFARLR 503 >gi|77164674|ref|YP_343199.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Nitrosococcus oceani ATCC 19707] gi|254434877|ref|ZP_05048385.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Nitrosococcus oceani AFC27] gi|76882988|gb|ABA57669.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nitrosococcus oceani ATCC 19707] gi|207091210|gb|EDZ68481.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Nitrosococcus oceani AFC27] Length = 190 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 6/149 (4%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M A+E ++ A + P G+V +I+ NR+ +D +AHAEI AIR Sbjct: 34 ERATQWMRRAIELSRKAMELGDGFPFGSVIAKEGEIVGEGWNRSWVNRDPSAHAEIEAIR 93 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ---FY 117 C+ L L D+Y + +PC MC AAI A R+++G ++ ++ Y Sbjct: 94 DACKRLDTLSLEGCDVYASAQPCPMCIAAIYWAGADRIFFGNNDRDIAALDPNLDATFIY 153 Query: 118 TL--ATCHHSPEIYPGISEQRSRQIIQDF 144 P + + + ++ +D+ Sbjct: 154 QALTKPAERRPVTERELLREEAMEVFRDY 182 >gi|126659190|ref|ZP_01730328.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Cyanothece sp. CCY0110] gi|126619495|gb|EAZ90226.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Cyanothece sp. CCY0110] Length = 143 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 10/146 (6%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL EA+ ++P GA+ V N++II R N + DV+AH EI +R Sbjct: 2 NHEKFMREALVEAKK----GDLPYGAILVNNDEIIMRGYNTAQRDNDVSAHGEINVLRAM 57 Query: 63 CRILSQ--EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + + L LY T EPC MCAAA A + + +GAS + + T Sbjct: 58 TQKIGYSLDSLKNYTLYTTCEPCPMCAAACVWAGVSHIVFGASTEQLISLGTQQINLTCQ 117 Query: 121 TC----HHSPEIYPGISEQRSRQIIQ 142 +I GI + + + Sbjct: 118 NVVTQGFQDIQITGGILAEECLDLFK 143 >gi|326499113|dbj|BAK06047.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 186 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 K + F+S A+EEA A P GAV V N+++++ N + D TAHAE+ AIR Sbjct: 29 DKEHKFLSIAVEEAYRAVDCGHGRPFGAVVVRNDQVVASCHNMVLKNTDPTAHAEVTAIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 CR L + L + ++Y + EP MC A+ L+RI+RL YGA GI Sbjct: 89 EACRKLGKIDLSDCEMYASCEPFPMCFGAVRLSRIKRLVYGAKAEAAVGIGF 140 >gi|116494635|ref|YP_806369.1| cytosine/adenosine deaminase [Lactobacillus casei ATCC 334] gi|227535386|ref|ZP_03965435.1| guanine deaminase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631766|ref|ZP_04674797.1| cytosine/adenosine deaminase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|116104785|gb|ABJ69927.1| Cytosine/adenosine deaminase [Lactobacillus casei ATCC 334] gi|227186982|gb|EEI67049.1| guanine deaminase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239526231|gb|EEQ65232.1| cytosine/adenosine deaminase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 155 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Query: 7 FMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ A EEA+ + P G V + + K++SRA N+ D TAH EI AIR + Sbjct: 6 FMAMANEEAKANVNGSDGGPFGCVIIKDGKVVSRAHNQVLVDHDPTAHGEITAIRKAGQA 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 L L +LY + PC MC +AI A I+++YYG + I Sbjct: 66 LGTHDLTGCELYTSAMPCPMCLSAIIWANIKQVYYGNTADDAAAIGF 112 >gi|323136503|ref|ZP_08071585.1| CMP/dCMP deaminase, zinc-binding [Methylocystis sp. ATCC 49242] gi|322398577|gb|EFY01097.1| CMP/dCMP deaminase, zinc-binding [Methylocystis sp. ATCC 49242] Length = 189 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 8/143 (5%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL+EA R + P GAV ++++ N + D TAH E++AIR Sbjct: 45 DDERYMRIALDEA----ARGDFPFGAVIEKGGRVLATGHNSGKSTNDPTAHGEMVAIRNF 100 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS----NPKGGGIENGTQFYT 118 + L +Y T EPC MC AI RR+ + AS + + G I ++ Sbjct: 101 IKSHPSAELNGATIYTTGEPCPMCMGAIIWCGFRRVVFAASIQELSTRLGQIMVTSETVA 160 Query: 119 LATCHHSPEIYPGISEQRSRQII 141 A + +I G+ + + + Sbjct: 161 AAASFANIDITGGVFAKEALALF 183 >gi|149278879|ref|ZP_01885014.1| cytidine/deoxycytidylate deaminase family protein [Pedobacter sp. BAL39] gi|149230498|gb|EDM35882.1| cytidine/deoxycytidylate deaminase family protein [Pedobacter sp. BAL39] Length = 168 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 1/116 (0%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ FM A++ ++ + P GA V ++I+++ N+ D TAHAE+ AIR Sbjct: 12 EQHAAFMKIAIDASEENVISGKGTPFGAAIVKEGQLIAKSANKVTADNDPTAHAEVAAIR 71 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + C+ L+ L +Y + EPC MC AAI ++I +YYG + F Sbjct: 72 IACQELNTYDLTGCVIYTSCEPCPMCLAAIYWSKISVVYYGNTRSDAAQAGFDDDF 127 >gi|300120277|emb|CBK19831.2| unnamed protein product [Blastocystis hominis] Length = 155 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 20/147 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI--RM 61 + ++ A EEA A E+P+G V V + + T HAE++AI + Sbjct: 7 DDKYLELAYEEANVAFEEREVPIGCVFVKD---------------NATLHAEMVAISRTL 51 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 G I LYVT+EPC MCA+AI+ + R+ +GASN + GG + + Sbjct: 52 GANGNDPTIFEGSTLYVTIEPCIMCASAIAQIGVSRVVFGASNDRFGGCGSVLSLHDQNE 111 Query: 122 C---HHSPEIYPGISEQRSRQIIQDFF 145 H E+ I ++RS +I+Q F+ Sbjct: 112 FSAGHKHYEVTRHIQKERSIEILQRFY 138 >gi|301066190|ref|YP_003788213.1| cytosine/adenosine deaminase [Lactobacillus casei str. Zhang] gi|300438597|gb|ADK18363.1| Cytosine/adenosine deaminase [Lactobacillus casei str. Zhang] Length = 155 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Query: 7 FMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ A EEA+ + P G V + + K++SRA N+ D TAH EI AIR + Sbjct: 6 FMAMANEEAKANVNGSDGGPFGCVIIKDGKVVSRAHNQVLVDHDPTAHGEITAIRKAGQA 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 L L +LY + PC MC +AI A I+++YYG + I Sbjct: 66 LGTHDLTGCELYTSAMPCPMCLSAIIWANIKQVYYGNTADDAAAIGF 112 >gi|327192975|gb|EGE59890.1| putative purine deaminase protein [Rhizobium etli CNPAF512] Length = 158 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 6/151 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M+ F+ A+ +++A + P G+V V N ++I RA N D+T HAE+ + Sbjct: 1 MENHEPFLREAIALSRSAIEQGGGEPFGSVLVKNGEVILRAENSVFSGHDMTNHAEMNLV 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYT 118 ++ + L + LY + EPC MC+ AI + I + + S + G I G + Sbjct: 61 KLAAQHYDTAFLADCTLYTSTEPCAMCSGAIYWSGIGHMVFACSETRLGEIAGIGLNVPS 120 Query: 119 LATCHHSPEIYPGI----SEQRSRQIIQDFF 145 A + E + ++ Q+F+ Sbjct: 121 RAVLQTGARFVTVVGPTSLEDEAAEVHQEFW 151 >gi|261879068|ref|ZP_06005495.1| guanine deaminase [Prevotella bergensis DSM 17361] gi|270334349|gb|EFA45135.1| guanine deaminase [Prevotella bergensis DSM 17361] Length = 155 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 1/116 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K + M A+ ++ + + P GAV N +++ A N D TAHAE+ AIR Sbjct: 1 MDKTEL-MRRAIVLSEKSVMTGGGPFGAVIARNGVVLAEASNSVTIDHDPTAHAEVNAIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + C L L ++Y + EPC MC AI AR+ +YY + I Sbjct: 60 VACDRLHTFDLSGCEIYCSCEPCPMCLGAIYWARLDHIYYANNRKAAASIGFDDDL 115 >gi|191638132|ref|YP_001987298.1| Guanine deaminase [Lactobacillus casei BL23] gi|190712434|emb|CAQ66440.1| Guanine deaminase [Lactobacillus casei BL23] gi|327382160|gb|AEA53636.1| Cytidine/deoxycytidylate deaminase [Lactobacillus casei LC2W] gi|327385358|gb|AEA56832.1| Cytidine/deoxycytidylate deaminase [Lactobacillus casei BD-II] Length = 155 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Query: 7 FMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ A EEA+ + P G V + + K++SRA N+ D TAH EI AIR + Sbjct: 6 FMAMANEEAKANVNGSDGGPFGCVIIKDGKVVSRAHNQVLVDHDPTAHGEITAIRKAGQA 65 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 L L +LY + PC MC +AI A I+++YYG + I Sbjct: 66 LGTHDLTGCELYTSAMPCPMCLSAIIWANIKQVYYGNTADDAAAIGF 112 >gi|116075283|ref|ZP_01472543.1| hypothetical protein RS9916_27024 [Synechococcus sp. RS9916] gi|116067480|gb|EAU73234.1| hypothetical protein RS9916_27024 [Synechococcus sp. RS9916] Length = 159 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 8/124 (6%) Query: 2 KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M A+ ++A + P GAV + ++++ AGN D +AHAE+ AI Sbjct: 4 DQDQTLMREAIRLMRDAGVVKKTGGPFGAVVAKDGEVVAAAGNSVVRDLDPSAHAEVNAI 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R C+ L L +Y + E C MC A A IR ++Y A + + ++ Sbjct: 64 RAACKKLGTWDLSGCVMYTSCECCPMCYATAYWAGIRTVFYAA------AWSDYSDLFSD 117 Query: 120 ATCH 123 + Sbjct: 118 QAIN 121 >gi|333031276|ref|ZP_08459337.1| Guanine deaminase [Bacteroides coprosuis DSM 18011] gi|332741873|gb|EGJ72355.1| Guanine deaminase [Bacteroides coprosuis DSM 18011] Length = 155 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 1/116 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K + M A+ + R+ P GAV + +I++ NR + D TAHAE+ AIR Sbjct: 1 MTKEEL-MRKAIALSIENVKRDGGPFGAVIAKDGEIVATGVNRVTDSCDPTAHAEVSAIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L L ++Y + EPC MC AI AR+ +LY+ + I F Sbjct: 60 AAAEKLKTFDLSGYEIYSSCEPCPMCLGAIYWARLDKLYFANTKTDAKDIGFDDSF 115 >gi|312623117|ref|YP_004024730.1| riboflavin biosynthesis protein ribd [Caldicellulosiruptor kronotskyensis 2002] gi|312203584|gb|ADQ46911.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor kronotskyensis 2002] Length = 371 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 18/152 (11%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ ALE A+ A + VG V V N +I + ++ K HAE+LAI Sbjct: 5 SHSYYMNMALELAKEASPLVLPNPRVGCVIVKNGTVIGKGYHQKYGEK----HAEVLAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 I + +L +YVTLEPC C AI + I+R+ +P G Sbjct: 61 DA--IKNGYLLKNSTMYVTLEPCCHYGKQLPCTEAIIKSGIKRVVIATKDPNPLVNGKGI 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q H E+ G+ ++ + I +DFFK Sbjct: 119 QILKQ----HGTEVIEGVLQKEAESINKDFFK 146 >gi|296413803|ref|XP_002836598.1| hypothetical protein [Tuber melanosporum Mel28] gi|295630426|emb|CAZ80789.1| unnamed protein product [Tuber melanosporum] Length = 179 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 43/111 (38%), Positives = 60/111 (54%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL+ A +A NE+PVG V V ++II+ N T HAE++AI Sbjct: 1 MQSALQIATSALQSNEVPVGCVFVHGSRIIASGRNDTNRSLCGTRHAELVAIDKILATHP 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I E DLYVT+EPC MCA+A+ IR++Y+G SN + GG + + Sbjct: 61 PSIFKETDLYVTVEPCIMCASALRQIGIRKVYFGCSNDRFGGCGGVLRVHE 111 >gi|251780701|ref|ZP_04823621.1| guanine deaminase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085016|gb|EES50906.1| guanine deaminase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 157 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 2/113 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M++ + M +++ + L E P GA V + KII+ A N + D TAH E+ AI Sbjct: 1 MQQKEI-MDLCVKQCKEGMLNLEGGPFGAAIVKDGKIIALANNTVIKDNDPTAHGEMNAI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 R C LS L +LY T EPC MC +AI + I ++YYG + I Sbjct: 60 RQACNKLSTFDLSGCELYTTSEPCPMCMSAIIWSNISKVYYGCTVKDAADIGF 112 >gi|308497160|ref|XP_003110767.1| hypothetical protein CRE_04875 [Caenorhabditis remanei] gi|308242647|gb|EFO86599.1| hypothetical protein CRE_04875 [Caenorhabditis remanei] Length = 168 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 2/118 (1%) Query: 4 GNVFMSCALEEAQNAALRNEI-PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M A+ EA + P GAV V ++++ N D T HAE+ AIR Sbjct: 14 HKELMEEAVAEACRGVECGDGGPFGAVIVDKKGNVVAKGHNMVIVTNDPTMHAEMTAIRN 73 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 C+ L L LY + PC MC A AR +YYGA+ + I + + Sbjct: 74 ACKALGTFDLSGHTLYTSCYPCPMCMGASLWARFDAIYYGATAQQAAEIGFDDKAFHD 131 >gi|189425440|ref|YP_001952617.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ] gi|189421699|gb|ACD96097.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ] Length = 145 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A+EEA+ IP+G+V V NN+II R NR + H E+ A+ R Sbjct: 2 DSFMQAAIEEAEAGLAEGGIPIGSVIVHNNRIIGRGHNRRVQQGSAILHGEMDALERAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + E LY TL PC MC+ AI L I R+ G + G E Sbjct: 62 QPAS-VYREAVLYTTLSPCPMCSGAILLYGIPRVVIGENRTFLGEEE----LLRSRGV-- 114 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 E+ + ++R ++++ F E+ Sbjct: 115 QLEV---LQDERCIRLMEQFIAEK 135 >gi|197117867|ref|YP_002138294.1| zinc-dependent cytosine deaminase [Geobacter bemidjiensis Bem] gi|197087227|gb|ACH38498.1| zinc-dependent cytosine deaminase [Geobacter bemidjiensis Bem] Length = 145 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 12/145 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +++M A+EEA+ IP+G+V V I+ R NR + H E+ A+ R Sbjct: 2 DIYMQSAIEEAKKGLGEGGIPIGSVLVHKGLILGRGHNRRVQKGSSILHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L ++ E LY TL PC+MC+ AI L I R+ G ++ G E H Sbjct: 62 -LPAQVYRESVLYTTLSPCSMCSGAILLYGIPRVVIGENSTFTGEEELLRS--------H 112 Query: 125 SPEIYPGISEQ-RSRQIIQDFFKER 148 ++ + + +++ F +E+ Sbjct: 113 GVQV--DVLQDQECISLMRTFIEEK 135 >gi|89070783|ref|ZP_01158036.1| cytidine and deoxycytidylate deaminase family protein [Oceanicola granulosus HTCC2516] gi|89043625|gb|EAR49832.1| cytidine and deoxycytidylate deaminase family protein [Oceanicola granulosus HTCC2516] Length = 149 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 62/111 (55%), Positives = 75/111 (67%) Query: 39 RAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 RAGNR REL D TAHAE+LAIR C + LP DLYVTLEPC MCAAAI ARI RL Sbjct: 39 RAGNRTRELADPTAHAELLAIRAACAAAGSDRLPGHDLYVTLEPCPMCAAAIGFARIARL 98 Query: 99 YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 YYGA++PK GG+ +G + HH PEIY GI+ + +++DFF + R Sbjct: 99 YYGAADPKSGGVAHGPRVLAHPQSHHRPEIYDGIAAGPAAALLRDFFADLR 149 >gi|242280630|ref|YP_002992759.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio salexigens DSM 2638] gi|242123524|gb|ACS81220.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio salexigens DSM 2638] Length = 145 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 10/128 (7%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM A + A+ + + +P+G+V V + KII N+ + D AH E+ IR Sbjct: 1 MSDME-FMEEAYKLAKKSFDQGGLPIGSVLVRDGKIIGSGHNQRVQKGDPIAHGEMDCIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG------T 114 R Q+ + +Y TL PC MC+ I I R+ G + GG E Sbjct: 60 NAGR---QKTYKDTTIYTTLSPCMMCSGTIVQFGISRVVIGENRNFGGNEEFLESRGVQV 116 Query: 115 QFYTLATC 122 C Sbjct: 117 DILDHPKC 124 >gi|220919906|ref|YP_002495209.1| CMP/dCMP deaminase zinc-binding [Methylobacterium nodulans ORS 2060] gi|219952326|gb|ACL62717.1| CMP/dCMP deaminase zinc-binding [Methylobacterium nodulans ORS 2060] Length = 160 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 5/111 (4%) Query: 1 MKKGNV-FMSCALEEAQN---AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M + FM+ A+E ++ + G V V + +I++ NR D T H EI Sbjct: 1 MTDDDKKFMARAIELSEKTSLVESAGGV-FGCVIVQDGEILAEGANRVVAENDPTWHGEI 59 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 AIR C+ L + LY + EPC MC AA A I+ +YY A+N Sbjct: 60 EAIRKACKAQGSFKLRDATLYTSAEPCPMCMAAAYWAGIKAIYYAATNEDA 110 >gi|148266168|ref|YP_001232874.1| CMP/dCMP deaminase, zinc-binding [Geobacter uraniireducens Rf4] gi|146399668|gb|ABQ28301.1| CMP/dCMP deaminase, zinc-binding protein [Geobacter uraniireducens Rf4] Length = 160 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 42/141 (29%), Positives = 59/141 (41%), Gaps = 12/141 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL EA+ IP+G+V V N +II R NR + H E+ A+ R Sbjct: 17 DTFMQAALAEAKQGQAEGGIPIGSVIVHNGRIIGRGHNRRVQKGSAILHGEMDALENAGR 76 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + E LY TL PC MC+ AI L I R+ G + G E Sbjct: 77 QTAA-VYRECTLYTTLSPCAMCSGAILLYGIPRVIVGENRTFLGEEE----LLKSRG--- 128 Query: 125 SPEIYPGIS-EQRSRQIIQDF 144 + + EQ ++ DF Sbjct: 129 ---VTVDVLQEQECISMMTDF 146 >gi|256423014|ref|YP_003123667.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588] gi|256037922|gb|ACU61466.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588] Length = 159 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 1/101 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ FM A++ ++ + + P GA+ V +I+ R N+ D TAHAE++AIR Sbjct: 4 EREKRFMQMAVDLSREGMEKGDGGPFGAIVVRGEEIVGRGWNQVLSFNDPTAHAEVVAIR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 C L+ L + +++ + EPC MC AI AR +R+Y+ Sbjct: 64 DACANLNTFQLHDCEIFTSCEPCPMCLGAIYWARPQRVYFA 104 >gi|218245366|ref|YP_002370737.1| CMP/dCMP deaminase [Cyanothece sp. PCC 8801] gi|257058401|ref|YP_003136289.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8802] gi|218165844|gb|ACK64581.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8801] gi|256588567|gb|ACU99453.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8802] Length = 139 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 12/140 (8%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ EA+ IP+G+V V ++II + N+ + D HAEI +R RI Sbjct: 1 MKAAIAEAKQGLQEGGIPIGSVLVKGDQIIGKGHNKRVQDGDPVTHAEIDCLRNAGRIG- 59 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + LY TL PC +CA A+ I+++ G S G E H E Sbjct: 60 --NYQDTVLYSTLMPCYLCAGAVVQFGIKKVIAGESQTFPGAREFMES--------HGVE 109 Query: 128 IYPGISEQRSRQIIQDFFKE 147 + ++ +Q++Q+F ++ Sbjct: 110 VID-LNLGECQQLMQEFIEK 128 >gi|326492115|dbj|BAJ98282.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 186 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F+S A+EEA P GAV V N+++I N D TAHAE+ AIR Sbjct: 29 DRDHKFLSKAVEEAYKGVDCGHGGPFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L + L + ++Y + EPC MC A+ L+RI+RL YGA I Sbjct: 89 EACKKLGKIELSDCEMYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140 >gi|194398441|ref|YP_002036741.1| cytosine/adenosine deaminase [Streptococcus pneumoniae G54] gi|194358108|gb|ACF56556.1| Cytosine/adenosine deaminase [Streptococcus pneumoniae G54] Length = 106 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 56/97 (57%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +++ VFM AL EA+ A +EIP+G V V + +II R N EL+ HAEI+AI Sbjct: 5 LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 L + L+VT+EPC MC+ AI LARI + Sbjct: 65 DANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPK 101 >gi|118586582|ref|ZP_01544023.1| cytidine/deoxycytidylate deaminase [Oenococcus oeni ATCC BAA-1163] gi|118432961|gb|EAV39686.1| cytidine/deoxycytidylate deaminase [Oenococcus oeni ATCC BAA-1163] Length = 157 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 3/116 (2%) Query: 3 KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +V+M A+E+A P GAV V + ++I A N D TAHAEI+AIR Sbjct: 2 TDSVYMKLAIEQANENIVLKEGG-PFGAVIVRDQEVICAAHNMVLANLDPTAHAEIIAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 C++L+ L + LY + PC MC +A A I+ + YG + + I F Sbjct: 61 KACKVLATRDLSDCTLYTSAYPCPMCLSATIWANIKEVRYGNTPKEADRIGFRDDF 116 >gi|225451245|ref|XP_002276494.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|298204906|emb|CBI34213.3| unnamed protein product [Vitis vinifera] Length = 186 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + F++ A+EEA + P GAV V N++++ N D TAHAE+ AIR Sbjct: 29 DRDYKFLTAAVEEAYKGVECGDGGPFGAVVVHNDEVLVSCHNMVLTNTDPTAHAEVTAIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L+Q L + ++Y + EPC MC AI L+RI+RL YGA I Sbjct: 89 EACKKLNQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF 140 >gi|255630329|gb|ACU15521.1| unknown [Glycine max] Length = 186 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F+ A+EEA ++ P G V V N++I++ N D TAHAE+ AIR Sbjct: 29 DRDHKFLRKAVEEAYKGVDCKDGGPFGVVIVHNDEIVASCHNMVLCNTDPTAHAEVTAIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L Q L + ++Y + EPC MC AI L+RI+RL YGA I Sbjct: 89 EACKKLKQIELADCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF 140 >gi|187935669|ref|YP_001884839.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum B str. Eklund 17B] gi|187723822|gb|ACD25043.1| guanine deaminase [Clostridium botulinum B str. Eklund 17B] Length = 157 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 6/131 (4%) Query: 1 MKKGNVFMSCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M+K ++ M +E+ + L + P GA V + +II+ A N D TAH E+ AI Sbjct: 1 MQKKDI-MDLCVEKCKEGMLNLDGGPFGAAIVKDGEIIALANNTVISTNDPTAHGEVNAI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----NGTQ 115 R C LS L +LY T EPC MC +AI A I ++YYG + I + Sbjct: 60 RQACSKLSTFDLTGCELYTTSEPCPMCMSAIIWANISKVYYGCTVKDAADIGFRDEHILN 119 Query: 116 FYTLATCHHSP 126 F + Sbjct: 120 FLKGDCTNKKV 130 >gi|227355507|ref|ZP_03839902.1| guanine deaminase [Proteus mirabilis ATCC 29906] gi|227164303|gb|EEI49192.1| guanine deaminase [Proteus mirabilis ATCC 29906] Length = 153 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 55/105 (52%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 F+ A+ A P GAV V N ++I+ A N+ D TAHAE+LA+R Sbjct: 2 SDKQFIQQAISLATENVKVGGRPFGAVIVKNGQVIAHAVNQITATNDPTAHAELLALREA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 ++L + L + +Y + +PC MC AA+ +A I +++Y SN Sbjct: 62 GKVLGRAKLDDCVVYASGQPCPMCLAAMRMAGISQIFYAYSNDDA 106 >gi|298490596|ref|YP_003720773.1| CMP/dCMP deaminase zinc-binding protein ['Nostoc azollae' 0708] gi|298232514|gb|ADI63650.1| CMP/dCMP deaminase zinc-binding protein ['Nostoc azollae' 0708] Length = 143 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 12/141 (8%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ EA+ IP+G+V V N KI+ + N+ + D HAEI +R R+ Sbjct: 5 MQAAISEAKQGRDEGGIPIGSVLVRNGKILGKGHNKRVQDGDPVTHAEIDCLRNAGRLG- 63 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + LY TL PC +CA A+ I+++ G S G E H E Sbjct: 64 --NYKGITLYSTLMPCYLCAGAVVQFGIKKVIAGESRTFPGAKEFMVS--------HGVE 113 Query: 128 IYPGISEQRSRQIIQDFFKER 148 + ++ +Q++ +F E+ Sbjct: 114 VID-LNLDECKQMMNEFITEK 133 >gi|209886320|ref|YP_002290177.1| cytidine/deoxycytidylate deaminase family protein [Oligotropha carboxidovorans OM5] gi|209874516|gb|ACI94312.1| cytidine/deoxycytidylate deaminase family protein [Oligotropha carboxidovorans OM5] Length = 154 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 40/107 (37%), Positives = 52/107 (48%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M F+ A+E A+N P GAV V + K+I+ N D T HAE+ AIR Sbjct: 1 MSDTERFLCEAIELARNNVRNGGRPFGAVLVKDGKVIATGVNEIGATGDPTTHAELQAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 R+L L +Y + PC MC AA+ L IR L Y SN +G Sbjct: 61 AASRVLGTPRLDGCIVYASGHPCPMCLAAMHLTGIRELAYAYSNDEG 107 >gi|70990810|ref|XP_750254.1| cytosine deaminase [Aspergillus fumigatus Af293] gi|119496775|ref|XP_001265161.1| cytosine deaminase, putative [Neosartorya fischeri NRRL 181] gi|66847886|gb|EAL88216.1| cytosine deaminase, putative [Aspergillus fumigatus Af293] gi|119413323|gb|EAW23264.1| cytosine deaminase, putative [Neosartorya fischeri NRRL 181] gi|159130729|gb|EDP55842.1| cytosine deaminase, putative [Aspergillus fumigatus A1163] Length = 148 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 14/150 (9%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M+ F+ ALEEA+ A +P+GA V + KI+ R N + T HAE+ A+ Sbjct: 1 METDAGFI-AALEEAKKGAAEGGVPIGAALVSKDGKILGRGHNMRVQKGSATLHAEMSAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R+ + +Y TL PC MC A L +++R+ G + GG E Sbjct: 60 ENSGRLPASAY-EGATMYTTLSPCDMCTGACILYKVKRVVIGENKNFMGGEEYL------ 112 Query: 120 ATCHHSPEIYPGISE-QRSRQIIQDFFKER 148 + E+ + + + +Q+++ F KE+ Sbjct: 113 --LNRGKEVV--VLDNEECKQLMEKFIKEK 138 >gi|305664674|ref|YP_003860961.1| putative cytosine/adenosine deaminase [Maribacter sp. HTCC2170] gi|88707375|gb|EAQ99621.1| putative cytosine/adenosine deaminase [Maribacter sp. HTCC2170] Length = 154 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 5/143 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + +M+ ++ A+ A PVGA+ V ++I+ R KD+T HAEI AI+ Sbjct: 10 MVNHDFYMAKCIQLAEEAKQNGNTPVGALIVSKDEILGIGRENTRSKKDITRHAEIEAIQ 69 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118 + + L LY T EPC MC+ I I + +G + GG + Sbjct: 70 NALKKVKS--LKGAILYTTHEPCVMCSYVIRHYEIGTVVFGLRSKYIGGKSSEFNLLETE 127 Query: 119 -LATCHHSPEIYPGISEQRSRQI 140 + P G+ + +Q+ Sbjct: 128 NIPIWSQPPSFIEGVLVKECQQL 150 >gi|126641614|ref|YP_001084598.1| putative deaminase [Acinetobacter baumannii ATCC 17978] Length = 135 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 44/114 (38%), Positives = 57/114 (50%), Gaps = 1/114 (0%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP-EVDLYVTLEPCTMCAAAIS 91 NK+I N L D TAHAEI AIR C L LP + LYVTLEPCTMC A+ Sbjct: 3 QNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESLKNYRLPEDATLYVTLEPCTMCVGALV 62 Query: 92 LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 ARI+ + +G + PK G + + Q +H G ++ Q + FF Sbjct: 63 HARIKHVVFGTTEPKAGSLVSARQLLENGYYNHKFTFEHGCLHEKCAQQLSLFF 116 >gi|261855466|ref|YP_003262749.1| Guanine deaminase [Halothiobacillus neapolitanus c2] gi|261835935|gb|ACX95702.1| Guanine deaminase [Halothiobacillus neapolitanus c2] Length = 163 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 1/117 (0%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ M A+E ++ + P GAV N ++I+ N+ D TAHAE+ AIR Sbjct: 8 EQEKQIMRQAIEFSREKMIAGFGGPFGAVISRNGEVIATGFNQVTSANDPTAHAEVSAIR 67 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 C++L+ L ++Y + EPC MC +AI AR+ R+YY S I F Sbjct: 68 AACQVLNTFDLSGCEIYTSCEPCPMCLSAIYWARLDRIYYANSRQDAADIGFDDAFL 124 >gi|255626047|gb|ACU13368.1| unknown [Glycine max] Length = 170 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + N F++ A+EEA A P GAV V N++I+S N D TAHAEI AIR Sbjct: 13 DRENKFLTMAIEEAYKAVESGHGRPFGAVIVRNDEILSSCHNMVVRNADPTAHAEITAIR 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 CR L+Q L + ++Y + EPC MC +AI ++I++L YGA I Sbjct: 73 EACRKLNQVELADSEIYASCEPCPMCLSAIHFSKIKKLVYGAKAEAAVAIGF 124 >gi|295442884|ref|NP_596505.2| tRNA specific adenosine deaminase subunit Tad2 (predicted) [Schizosaccharomyces pombe 972h-] gi|259016150|sp|O94642|TAD2_SCHPO RecName: Full=tRNA-specific adenosine deaminase subunit tad2; AltName: Full=tRNA-specific adenosine-34 deaminase subunit tad2 gi|254745608|emb|CAB38514.2| tRNA specific adenosine deaminase subunit Tad2 (predicted) [Schizosaccharomyces pombe] Length = 389 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 11/151 (7%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-------PVGAVAVLNNKIISRAGNRNRELKDVTAHA 54 + +M A E P V V ++I R N HA Sbjct: 212 TQHETYMKLAHEI----LNLGPYFVIQPRSPGSCVFVYKGEVIGRGFNETNCSLSGIRHA 267 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E++AI + E LYVT+EPC MCAAA+ I+ +Y+G N + GG + Sbjct: 268 ELIAIEKILEHYPASVFKETTLYVTVEPCLMCAAALKQLHIKAVYFGCGNDRFGGCGSVF 327 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + S +YPG+ + ++++F+ Sbjct: 328 SINKDQSIDPSYPVYPGLFYSEAVMLMREFY 358 >gi|45358432|ref|NP_987989.1| cytidine/deoxycytidylate deaminase [Methanococcus maripaludis S2] gi|44921190|emb|CAF30425.1| Cytidine/deoxycytidylate deaminase, zinc-binding region related protein [Methanococcus maripaludis S2] Length = 141 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 10/140 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A++EA + IP+GAV V NKII R NR + HAE+ A+ R L+ Sbjct: 1 MDEAVKEANLSLKEGGIPIGAVLVYENKIIGRGHNRRVQNNSAILHAEMDALENAGR-LT 59 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 ++ +LY TL PC MC+ A+ L +I+++ G + G + E Sbjct: 60 SDVYKNCELYTTLSPCIMCSGAVLLYKIKKVVIGENKTFLGA----EDLLIKNGV--AVE 113 Query: 128 IYPGISEQRSRQIIQDFFKE 147 + ++++R +++++F + Sbjct: 114 V---LNDERCVKMMKEFIEN 130 >gi|312885336|ref|ZP_07745000.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM 18603] gi|311302187|gb|EFQ79192.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM 18603] Length = 148 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 1/108 (0%) Query: 10 CALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 A+E +++ + P GAV V + +I+R+ NR D TAHAE+ AIR+ C+ L Sbjct: 1 MAIELSEHNVQQGQGGPFGAVIVKDGMVIARSANRVVPQNDPTAHAEVSAIRLACQELQS 60 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L +Y + EPC MC AI ARI +YY I +F Sbjct: 61 FSLEGCVIYTSCEPCPMCLGAIYWARINEIYYANDKADAAAIGFDDKF 108 >gi|227541098|ref|ZP_03971147.1| tRNA-specific adenosine deaminase [Corynebacterium glucuronolyticum ATCC 51866] gi|227183114|gb|EEI64086.1| tRNA-specific adenosine deaminase [Corynebacterium glucuronolyticum ATCC 51866] Length = 161 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 44/128 (34%), Positives = 61/128 (47%), Gaps = 1/128 (0%) Query: 23 EIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 ++PV A V +I N + D TAHAE+ AIRM R IL +L VTLE Sbjct: 28 DVPVAAAVFDAEGTMIGWGTNERKATSDPTAHAEVQAIRMAARARRDYILENTELVVTLE 87 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PCTMCA A ARI L +GA K G + + + E+ G+ + Sbjct: 88 PCTMCAGAFLAARIPSLVFGAFEEKTGAVGSVIDVVREPALPNRVEVVGGVLADECAAPL 147 Query: 142 QDFFKERR 149 + FF+++R Sbjct: 148 RAFFRDKR 155 >gi|268574528|ref|XP_002642242.1| Hypothetical protein CBG18226 [Caenorhabditis briggsae] gi|187025244|emb|CAP35711.1| hypothetical protein CBG_18226 [Caenorhabditis briggsae AF16] Length = 168 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 2/119 (1%) Query: 3 KGNVFMSCALEEAQNAALRNEI-PVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 M+ A+ EA + P GAV V N ++++ N KD T HAE+ AIR Sbjct: 13 NHKELMAEAVAEACRGVECGDGGPFGAVIVDNKGNVVAKGHNMVLVTKDPTMHAEMTAIR 72 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 C+ L L LY + PC MC A AR +YYGA+ + I + + Sbjct: 73 NACKTLGTFDLSGHTLYTSCYPCPMCMGASLWARFDAIYYGATAQQAAEIGFDDKAFHD 131 >gi|83815475|ref|YP_446616.1| putative cytidine and deoxycytidylate deaminase [Salinibacter ruber DSM 13855] gi|83756869|gb|ABC44982.1| putative cytidine and deoxycytidylate deaminase [Salinibacter ruber DSM 13855] Length = 221 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 43/145 (29%), Positives = 60/145 (41%), Gaps = 8/145 (5%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ A++EA +A P GAV V ++ RAGN D T HAE +R Sbjct: 72 DHERFVRAAIDEAGSAQDAGNPPFGAVLVGPGGTVLDRAGNTEGRTGDCTGHAETNLVRA 131 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG----GGIENGTQF- 116 + E L + LY + EPC MCA AI ARI R+ +G + G Sbjct: 132 ASQEYDPERLAKATLYASTEPCAMCAGAIFWARIGRVVFGLRAERLYDMKGDAGRQLALS 191 Query: 117 --YTLATCHHSPEIYPGISEQRSRQ 139 LA +H E+ + E + Sbjct: 192 CEDVLARGNHEVEVVGPVLEDEAAA 216 >gi|302873177|ref|YP_003841810.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B] gi|307688659|ref|ZP_07631105.1| CMP/dCMP deaminase zinc-binding protein [Clostridium cellulovorans 743B] gi|302576034|gb|ADL50046.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B] Length = 169 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 6/114 (5%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 +++ A EEA A P+GAV V + I+S+ NR D TAHAE+ AIR Sbjct: 4 SDYDYLALAFEEANQAFEEGTYPIGAVIVDDDGNIVSKGRNRVFTESDCTAHAEVDAIRK 63 Query: 62 GCRIL---SQEIL--PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 L + + LY T EPC MC I L+ I+R+ + A + + GGI Sbjct: 64 AGHKLLDIPNKRFVKNNLTLYTTCEPCPMCTCTILLSGIKRVVWAADDDEYGGI 117 >gi|239832713|ref|ZP_04681042.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum intermedium LMG 3301] gi|239824980|gb|EEQ96548.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum intermedium LMG 3301] Length = 156 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 33/107 (30%), Positives = 56/107 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M F+ A++ A + + P GAV V ++I+ NR + D TAHAE+LA+R Sbjct: 1 MSSDGTFLDQAIKLAFDNIEQGGRPFGAVVVKGGEVIATGVNRMQADCDPTAHAELLALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 + L L ++Y + +PC MC AA+ +A + ++ + SN + Sbjct: 61 AAGKALRSPRLDGCEVYASGQPCPMCFAAMRMAGVEKIRFAYSNEQA 107 >gi|226324154|ref|ZP_03799672.1| hypothetical protein COPCOM_01932 [Coprococcus comes ATCC 27758] gi|225207703|gb|EEG90057.1| hypothetical protein COPCOM_01932 [Coprococcus comes ATCC 27758] Length = 153 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 34/90 (37%), Positives = 48/90 (53%) Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + +++ L E LYVTLEPC MC+ AI ARI R+ G NPK G + + Sbjct: 8 KKASKVMGDWRLEECTLYVTLEPCQMCSGAIVQARIPRVVVGCMNPKAGCAGSILNLLQV 67 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ GI E+ Q+++ FFKE R Sbjct: 68 EAFNHQAELTTGILEEECSQMMKSFFKELR 97 >gi|114609581|ref|XP_001172262.1| PREDICTED: hypothetical protein LOC463037 isoform 1 [Pan troglodytes] gi|31874632|emb|CAD98054.1| hypothetical protein [Homo sapiens] gi|119568253|gb|EAW47868.1| deaminase domain containing 1, isoform CRA_b [Homo sapiens] gi|193785142|dbj|BAG54295.1| unnamed protein product [Homo sapiens] Length = 144 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 8/125 (6%) Query: 31 VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL------SQEILPEVDLYVTLEPCT 84 V NN+++ + N + K+ T HAE++AI E+ LYVT+EPC Sbjct: 2 VYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEVFEHTVLYVTVEPCI 61 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGISEQRSRQIIQ 142 MCAAA+ L +I + YG N + GG + L + PG + + ++++ Sbjct: 62 MCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRPFQCIPGYRAEEAVEMLK 121 Query: 143 DFFKE 147 F+K+ Sbjct: 122 TFYKQ 126 >gi|83814096|ref|YP_445447.1| cytidine deaminase [Salinibacter ruber DSM 13855] gi|83755490|gb|ABC43603.1| probable cytidine deaminase [Salinibacter ruber DSM 13855] Length = 237 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 49/122 (40%), Gaps = 1/122 (0%) Query: 7 FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A+E A P A+ V + +I+ R N L D TAHAE+ AIR C Sbjct: 87 FLREAIEMAVQNVTTGQGGPFAALVVRDGEIVGRGTNVVTTLNDPTAHAEVTAIRRACDA 146 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LY T EPC MC A AR+ R+YY A+ Sbjct: 147 LDDFELAGCTLYATCEPCPMCLGAAYWARLDRVYYAATQEDAAEAGFDDHHIYEEMAKPP 206 Query: 126 PE 127 E Sbjct: 207 TE 208 >gi|170585310|ref|XP_001897427.1| tRNA-specific adenosine deaminase 2 [Brugia malayi] gi|158595106|gb|EDP33679.1| tRNA-specific adenosine deaminase 2, putative [Brugia malayi] Length = 192 Score = 137 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 45/152 (29%), Positives = 83/152 (54%), Gaps = 7/152 (4%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K+ F++ A E A +A NE+PVG V V + ++ N K+ T HAE++A+ M Sbjct: 9 KEEVHFLNRAFEIAVDAVANNEVPVGCVFVFEGQEVAFGRNDVNRSKNPTYHAEMVALEM 68 Query: 62 GCRILSQ------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + + +++ LYVTLEPC MCA+A+ ++++ YGA+N + GG+ + Sbjct: 69 MKQWCTDNGRELEDVMRCTTLYVTLEPCIMCASALYHLHLKKILYGAANERFGGLLSVGT 128 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 H EI P ++ R+ +++++F+++ Sbjct: 129 R-EKYGAKHFIEIMPNLNVSRAVKLLKEFYEK 159 >gi|145347025|ref|XP_001417980.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578208|gb|ABO96273.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 173 Score = 137 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 12/150 (8%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL +A+ A E+P G + +I++ N ++ T HAE A+ Sbjct: 1 MRVALAQARLALDEWEVPCGCALARDGEIVAVGRNATNRTRNGTRHAEFEAVDALLDAHG 60 Query: 68 QE----ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT----- 118 + +V LYVT EPC MCA A+S +R + YG +N K GG + Sbjct: 61 GDRAACRFEDVTLYVTCEPCVMCAGAMSALGVREVVYGCANDKFGGAGTVLDAHARGCGA 120 Query: 119 ---LATCHHSPEIYPGISEQRSRQIIQDFF 145 + G+ E+ + ++ Q+F+ Sbjct: 121 CGGAGGVGKPYDARGGLFEREAIEMFQEFY 150 >gi|159112692|ref|XP_001706574.1| Cytosine deaminase, putative [Giardia lamblia ATCC 50803] gi|157434672|gb|EDO78900.1| Cytosine deaminase, putative [Giardia lamblia ATCC 50803] Length = 169 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 4/142 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M +EA A E+PVG V + +I++ N + ++ T HAEI+A+ ++ Sbjct: 1 MEECFKEASLALAEREVPVGCAIVDSAGRILATGRNATNKTRNSTHHAEIMAL---AQLP 57 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S L + LYVT+EPC MCAAA+S+ + + Y A N K GG + + Sbjct: 58 SGTDLSDCVLYVTIEPCIMCAAALSIVGLTNIIYFARNSKFGGCGSVLDVNNHTARPWTK 117 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 + ++R+ ++Q+FF+ + Sbjct: 118 LNAKYVPDERAIHLLQEFFERK 139 >gi|294507332|ref|YP_003571390.1| cytidine deaminase [Salinibacter ruber M8] gi|294343661|emb|CBH24439.1| Probable cytidine deaminase [Salinibacter ruber M8] Length = 237 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 49/122 (40%), Gaps = 1/122 (0%) Query: 7 FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A+E A P A+ V + +I+ R N L D TAHAE+ AIR C Sbjct: 87 FLREAIEMAVQNVTTGQGGPFAALVVRDGEIVGRGTNVVTTLNDPTAHAEVTAIRRACDA 146 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L LY T EPC MC A AR+ R+YY A+ Sbjct: 147 LDDFELAGCTLYATCEPCPMCLGAAYWARLDRVYYAATQEDAAEAGFDDHHIYEEMAKPP 206 Query: 126 PE 127 E Sbjct: 207 TE 208 >gi|330942469|gb|EGH45066.1| cytosine deaminase [Pseudomonas syringae pv. pisi str. 1704B] Length = 145 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 42/145 (28%), Positives = 62/145 (42%), Gaps = 12/145 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL+EAQ IP+G+V V KII R NR + T H EI A+ R Sbjct: 2 DAFMQAALDEAQLGLKEGGIPIGSVIVHGGKIIGRGHNRRVQEGSATKHGEIDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + + LY TL PC MC+ AI L IR++ G + G E Sbjct: 62 QPAS-VYRDSVLYTTLSPCAMCSGAILLYGIRKVIIGENESFMGEEE----LLRSRG--- 113 Query: 125 SPEIYPGISEQ-RSRQIIQDFFKER 148 + + + +++DF + Sbjct: 114 ---VQIDVLDNPECTHMMKDFIASK 135 >gi|330971095|gb|EGH71161.1| cytosine deaminase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 145 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A +EAQ IP+G+V V KII R NR + T H E+ A+ R Sbjct: 2 DAFMQAAFDEAQLGLKEGGIPIGSVIVHGGKIIGRGHNRRVQEGSATKHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + + LY TL PC MC+ AI L IR++ G G E Sbjct: 62 QPAS-VYRDSVLYTTLSPCAMCSGAILLYGIRKVIIGEHESFMGEEE----LLRSRGV-- 114 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 E+ + +++DF + Sbjct: 115 QIEV---LDNPECTHMMKDFIASK 135 >gi|71733993|ref|YP_273732.1| cytosine deaminase [Pseudomonas syringae pv. phaseolicola 1448A] gi|257486822|ref|ZP_05640863.1| cytosine deaminase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289625968|ref|ZP_06458922.1| cytosine deaminase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647969|ref|ZP_06479312.1| cytosine deaminase [Pseudomonas syringae pv. aesculi str. 2250] gi|298488192|ref|ZP_07006229.1| Cytosine deaminase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71554546|gb|AAZ33757.1| cytosine deaminase [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157471|gb|EFH98554.1| Cytosine deaminase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320325406|gb|EFW81471.1| cytosine deaminase [Pseudomonas syringae pv. glycinea str. B076] gi|320327453|gb|EFW83466.1| cytosine deaminase [Pseudomonas syringae pv. glycinea str. race 4] gi|330869365|gb|EGH04074.1| cytosine deaminase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330877290|gb|EGH11439.1| cytosine deaminase [Pseudomonas syringae pv. glycinea str. race 4] gi|330988661|gb|EGH86764.1| cytosine deaminase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010292|gb|EGH90348.1| cytosine deaminase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 145 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EAQ IP+G+V V KII R NR + T H E+ A+ R Sbjct: 2 DAFMQAAIDEAQLGLKEGGIPIGSVIVHEGKIIGRGHNRRVQEGSATRHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 ++ + + LY TL PC MC+ AI L IR++ G + G E Sbjct: 62 QPAR-VYRDAVLYTTLSPCAMCSGAILLYGIRKVIVGENQSFMGEEE----LLRSRGV-- 114 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 E+ + Q + ++Q F + Sbjct: 115 QIEV---LDNQECKHMMQGFIASK 135 >gi|115456425|ref|NP_001051813.1| Os03g0833900 [Oryza sativa Japonica Group] gi|40714681|gb|AAR88587.1| putative deoxycytidine deaminase [Oryza sativa Japonica Group] gi|108711941|gb|ABF99736.1| Guanine deaminase, putative, expressed [Oryza sativa Japonica Group] gi|113550284|dbj|BAF13727.1| Os03g0833900 [Oryza sativa Japonica Group] gi|215707116|dbj|BAG93576.1| unnamed protein product [Oryza sativa Japonica Group] gi|218194042|gb|EEC76469.1| hypothetical protein OsI_14201 [Oryza sativa Indica Group] gi|222626116|gb|EEE60248.1| hypothetical protein OsJ_13255 [Oryza sativa Japonica Group] Length = 186 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F+S A+EEA P GAV V N++I+ N + D TAHAE+ AIR Sbjct: 29 DRDHKFLSKAVEEAYQGVDCGHGGPFGAVVVRNDEIVVSCHNMVLDYTDPTAHAEVTAIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L + L + ++Y + EPC MC A+ L+RI+RL YGA I Sbjct: 89 EACKKLGKIELSDCEMYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140 >gi|21223347|ref|NP_629126.1| deaminase [Streptomyces coelicolor A3(2)] gi|256785550|ref|ZP_05523981.1| deaminase [Streptomyces lividans TK24] gi|289769446|ref|ZP_06528824.1| deaminase [Streptomyces lividans TK24] gi|20520975|emb|CAD30959.1| putative deaminase [Streptomyces coelicolor A3(2)] gi|289699645|gb|EFD67074.1| deaminase [Streptomyces lividans TK24] Length = 167 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 5/129 (3%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+E A + P GA+ +I++ N+ D TAHAE+ AIR C+ Sbjct: 16 AWMDKAIELATTSVRNGGGPFGALIAKGGEIVALGNNQVTAGLDPTAHAEVSAIRAACKA 75 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-----A 120 L L L + EPC MC ++ AR+ RL + A + + Sbjct: 76 LDTFSLEGCTLVTSCEPCPMCLSSALWARVDRLVFSADRHDAAVAGFDDRKFYDLFEKRP 135 Query: 121 TCHHSPEIY 129 + + Sbjct: 136 QANWPMTVE 144 >gi|168007071|ref|XP_001756232.1| predicted protein [Physcomitrella patens subsp. patens] gi|162692742|gb|EDQ79098.1| predicted protein [Physcomitrella patens subsp. patens] Length = 185 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ F+S A+EEA + P GAV V +++II R N + D TAHAE+ A+R Sbjct: 28 ERDYGFLSKAVEEAYEGVRCGDGGPFGAVVVKDDQIIVRCHNMVLKNMDPTAHAEVTAVR 87 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L + L + ++Y + EPC MC AI L++++RL YGA I Sbjct: 88 EACKKLERYDLSDCEIYASCEPCPMCFGAIHLSKMKRLVYGAQAEAALAIGF 139 >gi|104782115|ref|YP_608613.1| cytosine deaminase [Pseudomonas entomophila L48] gi|95111102|emb|CAK15822.1| Cytosine deaminase [Pseudomonas entomophila L48] Length = 141 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 10/141 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A++EA+ IP+G+V V + KII R NR + H E+ A+ R + Sbjct: 1 MQAAIDEARKGLEEGGIPIGSVLVHDGKIIGRGHNRRVQKGSAILHGEMDALENAGRQPA 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + + LY TL PC MC+ AI L I+R+ G + G + H Sbjct: 61 S-VYQQATLYTTLSPCAMCSGAILLYGIKRVVIGENETFLGEEQLLKNRGVALDVRHDHT 119 Query: 128 IYPGISEQRSRQIIQDFFKER 148 R ++Q F +++ Sbjct: 120 ---------CRTLMQQFIEKK 131 >gi|149174160|ref|ZP_01852788.1| Cytosine deaminase [Planctomyces maris DSM 8797] gi|148847140|gb|EDL61475.1| Cytosine deaminase [Planctomyces maris DSM 8797] Length = 145 Score = 136 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 12/145 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A+EEA+ +P+G+V V KII R N+ ++ H E+ A+ R Sbjct: 2 DEFMQAAIEEAEKGRDAGGVPIGSVLVYEGKIIGRGHNQRQQKGSAILHGEMSALEDAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 ++ + +Y TL PC MC+ AI L +I R+ G + F Sbjct: 62 QPAR-VYRNSVIYTTLSPCPMCSGAIRLYQIPRVVIGENQT----------FLGDERLLL 110 Query: 125 SPEIYPGISEQ-RSRQIIQDFFKER 148 + +I + + R Q+++DF Sbjct: 111 TSDIELEVLQDPRCIQLMEDFIAAH 135 >gi|156846411|ref|XP_001646093.1| hypothetical protein Kpol_543p65 [Vanderwaltozyma polyspora DSM 70294] gi|156116765|gb|EDO18235.1| hypothetical protein Kpol_543p65 [Vanderwaltozyma polyspora DSM 70294] Length = 268 Score = 136 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 15/160 (9%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILA 58 + K +M AL+ A++A E PV + V I+S N T+HAE +A Sbjct: 5 LSKHVEYMEYALKLARHALDHGETPVACIFVDKKTGGIVSYGMNDTNNSLAGTSHAEFVA 64 Query: 59 IRMGCRILSQ--EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 I S + ++ +YVT+EPC MCA+A+ I + +G N + GG Sbjct: 65 IDRIKNQFSSTFDKFEDIIVYVTVEPCIMCASALKQLGILNIVFGCGNERFGGNGTVLSI 124 Query: 117 YTL-----------ATCHHSPEIYPGISEQRSRQIIQDFF 145 + + I PGI + + +++ F+ Sbjct: 125 NNDTCTKLPANTVNSDSNRQDLILPGILRKEAIMLLRFFY 164 >gi|126655546|ref|ZP_01726985.1| cytosine deaminase [Cyanothece sp. CCY0110] gi|126623025|gb|EAZ93730.1| cytosine deaminase [Cyanothece sp. CCY0110] Length = 145 Score = 136 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 12/143 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ A+ EA+ IP+G+V V +NKII R N+ + D HAEI +R R Sbjct: 4 DEFIKAAIAEAKQGLKTGGIPIGSVLVKDNKIIGRGHNKRVQEGDPITHAEIDCLRNAGR 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 I S + LY TL PC +CA A+ I+++ G S G + H Sbjct: 64 IGS---YQDTVLYSTLMPCYLCAGAVVQFNIKKVIAGESKTFTGAKDFMES--------H 112 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 E+ + +++ F + Sbjct: 113 GVEVIDLDLA-ECKDLMRQFIEN 134 >gi|289618605|emb|CBI54849.1| unnamed protein product [Sordaria macrospora] Length = 681 Score = 136 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 43/164 (26%), Positives = 63/164 (38%), Gaps = 45/164 (27%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL+ A+ A NE PVG V V +++I+R N ++ T HAE++AI Sbjct: 336 HAGFMREALDMARLALKTNETPVGCVLVYKDRVIARGMNATNVSRNGTRHAELMAICALL 395 Query: 64 RILSQEIL---------------------------------------------PEVDLYV 78 L E LYV Sbjct: 396 SYSGDADLEPKNAQHQCNHDEPSFWGDVDPRDGHLFPYGQKLHPAPRVDRSVVSECTLYV 455 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 T+EPC MCA+ + RI+++Y+GA N K GG + + + Sbjct: 456 TVEPCVMCASLLRQLRIKKVYFGAVNDKFGGTGGVFRIHKNSPF 499 >gi|85118833|ref|XP_965519.1| hypothetical protein NCU01888 [Neurospora crassa OR74A] gi|28927329|gb|EAA36283.1| predicted protein [Neurospora crassa OR74A] Length = 674 Score = 136 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 43/164 (26%), Positives = 63/164 (38%), Gaps = 45/164 (27%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL+ A+ A NE PVG V V +++I+R N ++ T HAE++AI Sbjct: 330 HAGFMREALDMARLALKTNETPVGCVLVYKDRVIARGMNATNVSRNGTRHAELMAICALL 389 Query: 64 RILSQEIL---------------------------------------------PEVDLYV 78 L E LYV Sbjct: 390 SYSGDADLEPKNVQPQCNHDEPSVWGDVDPRDGHLFPYGQKLHPAPRVDRSVISECTLYV 449 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 T+EPC MCA+ + RI+++Y+GA N K GG + + + Sbjct: 450 TVEPCVMCASLLRQLRIKKVYFGAVNDKFGGTGGVFRIHKNSPF 493 >gi|66047004|ref|YP_236845.1| cytosine deaminase [Pseudomonas syringae pv. syringae B728a] gi|289676943|ref|ZP_06497833.1| cytosine deaminase [Pseudomonas syringae pv. syringae FF5] gi|302187712|ref|ZP_07264385.1| cytosine deaminase [Pseudomonas syringae pv. syringae 642] gi|63257711|gb|AAY38807.1| Cytosine deaminase [Pseudomonas syringae pv. syringae B728a] gi|330977861|gb|EGH77764.1| cytosine deaminase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 145 Score = 136 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 12/145 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A +EAQ IP+G+V V KII R NR + T H E+ A+ R Sbjct: 2 DAFMQAAFDEAQLGLKEGGIPIGSVIVHGGKIIGRGHNRRVQEGSATKHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + + LY TL PC MC+ AI L IR++ G + G E Sbjct: 62 QPAS-VYRDSVLYTTLSPCAMCSGAILLYGIRKVIIGENESFMGEEE----LLRSRG--- 113 Query: 125 SPEIYPGISEQ-RSRQIIQDFFKER 148 + + + +++DF + Sbjct: 114 ---VQIDVLDNPECTHMMKDFIASK 135 >gi|239978013|ref|ZP_04700537.1| deaminase [Streptomyces albus J1074] gi|291449917|ref|ZP_06589307.1| deaminase [Streptomyces albus J1074] gi|291352866|gb|EFE79768.1| deaminase [Streptomyces albus J1074] Length = 168 Score = 136 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 50/114 (43%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+ A ++A P GA+ + +++ N+ D +AHAE+ AIR C+ Sbjct: 17 AWMEQAISLATDSARSGGGPFGALIAKDGLVVATGHNQVTASLDPSAHAEVSAIRAACKE 76 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L+ L L + EPC MC + AR+ RL Y A + + Sbjct: 77 LNTFSLAGCVLITSCEPCPMCLSTALWARVDRLVYAADRHDAAVAGFDDRAFYD 130 >gi|150398810|ref|YP_001322577.1| CMP/dCMP deaminase zinc-binding [Methanococcus vannielii SB] gi|150011513|gb|ABR53965.1| CMP/dCMP deaminase zinc-binding [Methanococcus vannielii SB] Length = 146 Score = 136 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 18/145 (12%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM A++EA+ A+ IP+GAV V NK+I R N+ + V HAE+ A+ RI Sbjct: 3 KFMEEAIKEAKLGAIEGGIPIGAVLVYKNKVIGRGHNKRIQKNSVVFHAEMDALENAGRI 62 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----NGTQFYTLAT 121 + I + +LY TL PC MC+ AI L I+++ G + G E NG + L Sbjct: 63 -NSSIYKDCELYTTLSPCIMCSGAILLYNIKKVIIGENKTFKGAEELLEKNGVKLEVLND 121 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFK 146 + ++++F K Sbjct: 122 KN-------------CIDMMEEFIK 133 >gi|312887290|ref|ZP_07746893.1| Guanine deaminase [Mucilaginibacter paludis DSM 18603] gi|311300248|gb|EFQ77314.1| Guanine deaminase [Mucilaginibacter paludis DSM 18603] Length = 170 Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 1/119 (0%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM+ A++ + + N P GA+ V N K+I+ GN D TAHAE+ AIR Sbjct: 9 EHLKFMNMAVKCSSDNLKTNLGGPFGAIIVKNGKVIACEGNTVTSSNDPTAHAEVNAIRA 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L L +Y + EPC MC +AI A+I +YYG + F T Sbjct: 69 ACQALKSPDLEGCIMYTSCEPCPMCTSAIYWAQINVVYYGNTKTDAEWAGFSDTFITEE 127 >gi|242043476|ref|XP_002459609.1| hypothetical protein SORBIDRAFT_02g007465 [Sorghum bicolor] gi|241922986|gb|EER96130.1| hypothetical protein SORBIDRAFT_02g007465 [Sorghum bicolor] Length = 175 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 1/111 (0%) Query: 2 KKGNVFMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ F+ A++EA A P GAV V ++ + + N R+ D +AHAE+ AIR Sbjct: 17 ERDYKFILKAVDEAYRAVECDGGYPFGAVIVHGDEEVVSSHNLVRKDTDPSAHAEVAAIR 76 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 C+ L + L + ++Y + EPC MC I L++I+++ YGA + Sbjct: 77 QACKKLGKINLSDCEIYTSCEPCPMCLGLIRLSKIKKVVYGAKSEVAAAAG 127 >gi|220906017|ref|YP_002481328.1| CMP/dCMP deaminase [Cyanothece sp. PCC 7425] gi|219862628|gb|ACL42967.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7425] Length = 161 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 5/122 (4%) Query: 3 KGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + A+E + AAL P G V + II+ NR D T H E+ AIR Sbjct: 5 EDERLIRRAIELGRRAALDLCTGGPFGCVIAKDGAIIAEGYNRVVAENDPTWHGEMAAIR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP---KGGGIENGTQFY 117 + L L LY + EPC MCAAA AR+ R+ Y + K GG ++ + Sbjct: 65 QAAKQLQTFDLSGCVLYTSAEPCPMCAAACWWARLDRIVYASRVEDALKYGGFDDREIYL 124 Query: 118 TL 119 L Sbjct: 125 DL 126 >gi|254282421|ref|ZP_04957389.1| guanine deaminase [gamma proteobacterium NOR51-B] gi|219678624|gb|EED34973.1| guanine deaminase [gamma proteobacterium NOR51-B] Length = 155 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 50/115 (43%), Gaps = 1/115 (0%) Query: 7 FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A++ A + P GAV V NN++I+ + NR D TAHAE+ AIR Sbjct: 5 FLHRAIQLASDNIDSGKGGPFGAVIVKNNEMIAESANRVLAHSDPTAHAEVEAIRSAGEA 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L LY + EPC MC AI ARI +Y+ + Sbjct: 65 LGTFDLSGCTLYASCEPCPMCLGAIYWARISAVYFAGDRKDAESAGFDDKLIYDE 119 >gi|16331502|ref|NP_442230.1| hypothetical protein sll0051 [Synechocystis sp. PCC 6803] gi|1001158|dbj|BAA10300.1| sll0051 [Synechocystis sp. PCC 6803] Length = 159 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 2/103 (1%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ +M A+ ++A + N P G V V + ++I AGN + D +AHAE+ AI Sbjct: 4 EQDREYMRQAIAIMRDAGVVNKTGGPFGVVIVKDGEVIGAAGNSVIQDNDPSAHAEVNAI 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 R C+ + L +Y + E C MC A ARI ++YY A Sbjct: 64 REACKTVGSWNLEGAVMYSSCECCPMCYATSYWARIDKIYYAA 106 >gi|53804410|ref|YP_113955.1| zinc-binding domain-containing protein [Methylococcus capsulatus str. Bath] gi|53758171|gb|AAU92462.1| zinc-binding domain protein [Methylococcus capsulatus str. Bath] Length = 164 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 18/154 (11%) Query: 2 KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ +M A++ + A R P GAV V ++++ AGN D TAHAEI AI Sbjct: 9 EQDRAYMRLAIQTMRRAGIVDRTGGPFGAVIVRGGQVLAVAGNSVIRDNDPTAHAEINAI 68 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R CR + L LY + E C MC A+ ARI ++YY AS + + Sbjct: 69 REACRRIGSYDLSGAVLYSSCECCPMCYASAYWARIDQIYYAAS------WHDYEDLFDD 122 Query: 120 ATCHHSPEIYPG---------ISEQRSRQIIQDF 144 + H + I + + ++ ++F Sbjct: 123 SRIHEDI-VKSYAERHLAPQQIMREEALEVWREF 155 >gi|302871184|ref|YP_003839820.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor obsidiansis OB47] gi|302574043|gb|ADL41834.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor obsidiansis OB47] Length = 371 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 20/156 (12%) Query: 1 MK--KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 MK + +M+ ALE A+ A + VG V V N II + ++ K HAE+ Sbjct: 1 MKCLSHSYYMNMALELAKKASPLVLPNPRVGCVIVKNGTIIGKGYHQKYGEK----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 LAI + + L +YV+LEPC C AI + I+++ +P Sbjct: 57 LAIEDAIKNGNS--LKNATMYVSLEPCCHFGKQPPCTEAIIKSGIKKVIIATRDPNPLVN 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G Q H E+ G+ ++ + + ++FFK Sbjct: 115 GKGIQILKQ----HGIEVVEGVLQKEAESVNKEFFK 146 >gi|312134474|ref|YP_004001812.1| riboflavin biosynthesis protein ribd [Caldicellulosiruptor owensensis OL] gi|311774525|gb|ADQ04012.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor owensensis OL] Length = 371 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 18/152 (11%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ ALE A+ A L P VG V V N II + ++ K HAE+LAI Sbjct: 5 SHSYYMNMALELAKKASYLVLPNPRVGCVIVKNGTIIGKGYHQKYGEK----HAEVLAIE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 I + L +YV+LEPC C AI + I+++ +P G Sbjct: 61 DA--IKNGYSLKNATMYVSLEPCSHFGKQPPCTEAIIKSGIKKVVVATRDPNPIVNGKGI 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q H E+ G+ ++ + + ++FFK Sbjct: 119 QILKQ----HGIEVVEGVLQKEAEIVNKEFFK 146 >gi|188589366|ref|YP_001919994.1| cytidine/deoxycytidylate deaminase family protein [Clostridium botulinum E3 str. Alaska E43] gi|188499647|gb|ACD52783.1| guanine deaminase [Clostridium botulinum E3 str. Alaska E43] Length = 157 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 2/113 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M++ + M +++ + L E P GA V ++KII+ A N + D TAH E+ AI Sbjct: 1 MQQKEI-MDLCVKQCKEGMLNLEGGPFGAAIVKDSKIIALANNTVIKDNDPTAHGEMNAI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 R C LS L +LY T EPC MC +AI + I ++YYG + I Sbjct: 60 RQACNKLSTFDLSGCELYTTSEPCPMCMSAIIWSNISKVYYGCTVKDAADIGF 112 >gi|168002130|ref|XP_001753767.1| predicted protein [Physcomitrella patens subsp. patens] gi|162695174|gb|EDQ81519.1| predicted protein [Physcomitrella patens subsp. patens] Length = 191 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 1/118 (0%) Query: 4 GNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 F++ A +EA A + E P GAV V + +I+++A N + KD TAHAEI+AI+ Sbjct: 38 DYNFLTVAAKEADMAMRKEEGGPFGAVIVRDGEIVAQAHNEVLKQKDPTAHAEIVAIQKA 97 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L + L + +Y + EPC M AA+ LAR+ RL YGA + + A Sbjct: 98 CKKLGKIELSDCVIYSSCEPCPMSFAAMYLARLPRLVYGAQAEAAHDLGFDSSHIADA 155 >gi|159045329|ref|YP_001534123.1| hypothetical protein Dshi_2789 [Dinoroseobacter shibae DFL 12] gi|157913089|gb|ABV94522.1| hypothetical protein Dshi_2789 [Dinoroseobacter shibae DFL 12] Length = 151 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 65/129 (50%), Positives = 87/129 (67%), Gaps = 1/129 (0%) Query: 22 NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 E+PVGAV + K+++RAGNR REL D TAHAE+LAIR C E LP LYVTL Sbjct: 22 GEVPVGAVLIDPAGKVLARAGNRTRELSDPTAHAEVLAIRAACAAAGSERLPGAVLYVTL 81 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC +CAA I+ ARI RL YGA++PK GG+ +G + ++ HH PE+ GI+ ++ + Sbjct: 82 EPCAICAATIAAARIARLVYGAADPKSGGVAHGARVFSHPQSHHVPEVIDGIAAAQAEAL 141 Query: 141 IQDFFKERR 149 ++DFF RR Sbjct: 142 LKDFFAARR 150 >gi|320354083|ref|YP_004195422.1| CMP/dCMP deaminase zinc-binding protein [Desulfobulbus propionicus DSM 2032] gi|320122585|gb|ADW18131.1| CMP/dCMP deaminase zinc-binding protein [Desulfobulbus propionicus DSM 2032] Length = 173 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 6/150 (4%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRA--GNRNRELKDVTAHAEILA 58 M + FM+ ALEEA+ A E PVG V NN I++R N ++ HAE++ Sbjct: 2 MSEHEQFMAVALEEARLALAEGEFPVGCAMVANNGIVARGRRHNSIEGYRNEIDHAEVVT 61 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +R L V +Y T+EPC MC A + L+ IR + + GGG Y Sbjct: 62 LRRLIAEQPGLDLATVTVYTTMEPCLMCYATLLLSGIRSFVWAYEDVMGGGA--NLPLYM 119 Query: 119 LATCHHSPEI--YPGISEQRSRQIIQDFFK 146 L T + ++ + S ++ Q FF+ Sbjct: 120 LNTLYAQMQVHLIDRVLRTESLRLFQQFFR 149 >gi|307823574|ref|ZP_07653803.1| CMP/dCMP deaminase zinc-binding [Methylobacter tundripaludum SV96] gi|307735559|gb|EFO06407.1| CMP/dCMP deaminase zinc-binding [Methylobacter tundripaludum SV96] Length = 155 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 1/118 (0%) Query: 4 GNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 VF+ A++ A A P GA+ V +N++++ +GN+ D TAHAE++AIR+ Sbjct: 2 HKVFLQQAVDLAAENARSGQGGPYGAIIVKDNQLVAASGNKVTSTIDPTAHAEVMAIRLA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L+ L LY + EPC MC AI AR+ ++Y+ S F Sbjct: 62 CKKLNDFQLQGCILYSSCEPCPMCLGAIYWARLAKVYFACSRHDAAAANFDDSFIYDE 119 >gi|91773185|ref|YP_565877.1| CMP/dCMP deaminase, zinc-binding [Methanococcoides burtonii DSM 6242] gi|91712200|gb|ABE52127.1| Cytosine deaminase [Methanococcoides burtonii DSM 6242] Length = 143 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 12/143 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EA++ IP+G+V V ++ II + N + D AHAEI +R R Sbjct: 2 DEFMQVAIDEARSGLNSGGIPIGSVLVRDDLIIGKGHNLRVQQDDPMAHAEISCLRDAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + LY TL PC +CA A+ I+++ G S G E H Sbjct: 62 V-GSYR--DSILYSTLMPCYLCAGAVVQFGIKKVIVGESRTFSGAREFMES--------H 110 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 E+ + ++ DF + Sbjct: 111 GVEVVD-LDLDECVAMMDDFISK 132 >gi|88809683|ref|ZP_01125190.1| hypothetical protein WH7805_00725 [Synechococcus sp. WH 7805] gi|88786433|gb|EAR17593.1| hypothetical protein WH7805_00725 [Synechococcus sp. WH 7805] Length = 159 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 8/124 (6%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M A+ + A + N P GAV + K++S +GN D +AHAE+ AI Sbjct: 4 DQDRTLMKEAIRLMREAGVVNKSGGPFGAVIAKDGKVVSASGNSVVRDLDPSAHAEVNAI 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R C+ L L +Y + E C MC A A IR+++Y A + + ++ Sbjct: 64 RAACKALGTWDLTGCVMYTSCECCPMCYATAYWAGIRKVFYAA------AWSDYSDLFSD 117 Query: 120 ATCH 123 + Sbjct: 118 QEIN 121 >gi|118580396|ref|YP_901646.1| cytosine deaminase [Pelobacter propionicus DSM 2379] gi|118503106|gb|ABK99588.1| Cytosine deaminase [Pelobacter propionicus DSM 2379] Length = 145 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM ALEEA+ IP+G++ V ++ R NR + V HAE+ A+ R Sbjct: 2 DEFMQAALEEARKGLAEGGIPIGSLVVHRGAVLGRGHNRRVQKGSVILHAEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + I E LY TL PC MCA AI L I R+ G + G E Sbjct: 62 -MPAAIYRESVLYTTLSPCPMCAGAILLYGIPRVVIGENRNFRGEEE----LLRSRGV-- 114 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 E+ + ++ +++ F R Sbjct: 115 QVEL---LQDEECIALMRQFIDNR 135 >gi|68466625|ref|XP_722508.1| potential tRNA wobble position adenosine deaminase subunit [Candida albicans SC5314] gi|68466908|ref|XP_722369.1| potential tRNA wobble position adenosine deaminase subunit [Candida albicans SC5314] gi|46444339|gb|EAL03614.1| potential tRNA wobble position adenosine deaminase subunit [Candida albicans SC5314] gi|46444487|gb|EAL03761.1| potential tRNA wobble position adenosine deaminase subunit [Candida albicans SC5314] Length = 281 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 3/150 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILA 58 + +M+ +L A L NE PV + V ++KIIS N + T HAE +A Sbjct: 5 LTSHFQYMAISLFVGYKALLNNETPVSCIVVDSKSDKIISIGYNYTNHSLNGTQHAEFIA 64 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 ++ S ++ LYVT+EPC MCA+ + I+++ +G N + GG ++ Sbjct: 65 LQRFGEQKSSIDYNDLILYVTVEPCIMCASYLRQLGIKKVIFGCGNDRFGGNGTILSIHS 124 Query: 119 LATC-HHSPEIYPGISEQRSRQIIQDFFKE 147 T + + GI Q++++F+ + Sbjct: 125 DITLPNAAYSSIGGICRTEGIQLLRNFYIQ 154 >gi|331017345|gb|EGH97401.1| cytosine deaminase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 145 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EAQ IP+G+V V KII R NR + T H E+ A+ R Sbjct: 2 DAFMQAAIDEAQLGLDEGGIPIGSVIVHAGKIIGRGHNRRVQEGSATRHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + E LY TL PC MC+ AI L IR++ G + G E Sbjct: 62 QPAS-VYREAVLYTTLSPCAMCSGAILLYGIRKVIVGENQSFMGEEE----LLRSRGV-- 114 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 E+ + ++R + ++Q F ++ Sbjct: 115 QIEV---LDDERCKHMMQGFIADK 135 >gi|104782249|ref|YP_608747.1| deaminase [Pseudomonas entomophila L48] gi|95111236|emb|CAK15956.1| putative deaminase [Pseudomonas entomophila L48] Length = 152 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 35/103 (33%), Positives = 52/103 (50%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL+ A+ P GAV V ++I+RA N +D T HAE+ AIR Sbjct: 4 ETYMREALDLARANIQAGGRPFGAVLVYQGRVIARAVNEIHSTQDPTRHAEMQAIRQASE 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 +L + L ++Y + PC MC AA+ L I R ++ N +G Sbjct: 64 VLGRARLDGAEIYASGHPCPMCLAAMHLCGIERAWFAYDNEEG 106 >gi|227487346|ref|ZP_03917662.1| tRNA-specific adenosine deaminase [Corynebacterium glucuronolyticum ATCC 51867] gi|227092570|gb|EEI27882.1| tRNA-specific adenosine deaminase [Corynebacterium glucuronolyticum ATCC 51867] Length = 161 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 44/128 (34%), Positives = 61/128 (47%), Gaps = 1/128 (0%) Query: 23 EIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 ++PV A V +I N + D TAHAE+ AIRM R IL +L VTLE Sbjct: 28 DVPVAAAVFDAEGTMIGWGTNERKATSDPTAHAEVQAIRMAARARRDYILENTELVVTLE 87 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PCTMCA A ARI L +GA K G + + + E+ G+ + Sbjct: 88 PCTMCAGAFLAARIPSLVFGAFEEKTGAVGSVIDVVREPALPNRVEVVGGVLADDCAAPL 147 Query: 142 QDFFKERR 149 + FF+++R Sbjct: 148 RAFFRDKR 155 >gi|255724014|ref|XP_002546936.1| hypothetical protein CTRG_01242 [Candida tropicalis MYA-3404] gi|240134827|gb|EER34381.1| hypothetical protein CTRG_01242 [Candida tropicalis MYA-3404] Length = 279 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 4/150 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILA 58 + + +M+ +L A L NE PV + V ++IIS N + T HAE +A Sbjct: 5 LSRHFKYMAISLFVGYKALLNNETPVSCIVVNSKTDEIISIGYNYTNHSLNGTQHAEFIA 64 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 ++ ++ LYVT+EPC MCA+ + I ++ +G N + GG + Sbjct: 65 LQRF-ESDESINYSDLILYVTVEPCIMCASYLRQLGIGKVIFGCGNDRFGGNGTVLPVHK 123 Query: 119 LATCHHSPEI-YPGISEQRSRQIIQDFFKE 147 + + P + GI Q++++F+ + Sbjct: 124 DPSLPNKPYLSVGGICRAEGIQLLRNFYIQ 153 >gi|217979127|ref|YP_002363274.1| CMP/dCMP deaminase zinc-binding [Methylocella silvestris BL2] gi|217504503|gb|ACK51912.1| CMP/dCMP deaminase zinc-binding [Methylocella silvestris BL2] Length = 145 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 40/143 (27%), Positives = 56/143 (39%), Gaps = 8/143 (5%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL+EA + P GA+ + + I+ N D TAHAE++A+R Sbjct: 6 TDERFMRAALKEA----ALGDFPFGALIAQDGETIATGRNLGETNDDPTAHAEMVALRGV 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP----KGGGIENGTQFYT 118 L + LY T EPC MC AI + RL Y AS + G IE + Sbjct: 62 IAAYGAARLRDSTLYATGEPCPMCMGAIIWCGVGRLVYAASIEQLAQRIGQIETPCRDLA 121 Query: 119 LATCHHSPEIYPGISEQRSRQII 141 I G+ + + Sbjct: 122 RRASFTEICIEGGLLADEAMALF 144 >gi|75908250|ref|YP_322546.1| cytidine/deoxycytidylate deaminase [Anabaena variabilis ATCC 29413] gi|75701975|gb|ABA21651.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Anabaena variabilis ATCC 29413] Length = 141 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 42/142 (29%), Positives = 62/142 (43%), Gaps = 10/142 (7%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+ EA+ + P GAV V ++++++ A N D +AHAEI +R Sbjct: 4 EYFMRLAIAEAKK----GDAPYGAVIVKDDQVVAFAHNTVGRDNDPSAHAEINVVRRLTA 59 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-----YTL 119 L L +Y T EPC MCAAA + I + YGAS + N Q + Sbjct: 60 QLQSFSLEGYSIYTTGEPCPMCAAACVWSGIAEIIYGASIQDL-ILANQAQIQISCEEVI 118 Query: 120 ATCHHSPEIYPGISEQRSRQII 141 A + ++ GI Q + Sbjct: 119 AKSFRNIKVTKGILRQECLNLF 140 >gi|295395473|ref|ZP_06805668.1| tRNA-specific adenosine deaminase [Brevibacterium mcbrellneri ATCC 49030] gi|294971644|gb|EFG47524.1| tRNA-specific adenosine deaminase [Brevibacterium mcbrellneri ATCC 49030] Length = 142 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 37/109 (33%), Positives = 54/109 (49%) Query: 41 GNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 NR D TAHAE++A+R L + L L VTLEPC MCA A AR+ + + Sbjct: 34 RNRREADGDPTAHAEVVALRAAASRLGRWRLDGATLVVTLEPCAMCAGAAVGARVDAIVF 93 Query: 101 GASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 GA + K G + H P++Y G+ + ++++FF RR Sbjct: 94 GAFDEKAGACGSQWDLPRDRGSLHRPQVYAGVMSVEAVHVLEEFFAARR 142 >gi|72392897|ref|XP_847249.1| deaminase [Trypanosoma brucei TREU927] gi|62176083|gb|AAX70202.1| deaminase, putative [Trypanosoma brucei] gi|70803279|gb|AAZ13183.1| deaminase, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 225 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 72/183 (39%), Gaps = 40/183 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNK-----------------IISRAGNRNREL 47 +VFM AL+EA A E+PVG V V + I++R N Sbjct: 25 DVFMQAALKEATCALEEGEVPVGCVLVKADSSTAAQAQAGDDLALQKLIVARGRNATNRK 84 Query: 48 KDVTAHAEILA----IRMGCRILS------------QEILPEVDLYVTLEPCTMCAAAIS 91 AHAE +A +R S + L + LYV +EPC MCAA + Sbjct: 85 GHALAHAEFVAVEELLRQATAGTSENIGGGGNCGAVSQDLADYVLYVVVEPCIMCAAMLL 144 Query: 92 LARIRRLYYGASNPKGGGIENGTQFYT-------LATCHHSPEIYPGISEQRSRQIIQDF 144 R+R++Y+G +NP+ GG + E G + + ++Q F Sbjct: 145 YNRVRKVYFGCTNPRFGGNGTVLSVHNSYKGCSGEDAALIGYESCGGYRAEEAVVLLQQF 204 Query: 145 FKE 147 ++ Sbjct: 205 YRR 207 >gi|262372745|ref|ZP_06066024.1| guanine deaminase (Guanase) (guanine aminase) (guanine aminohydrolase) (GAH) (GDEase) [Acinetobacter junii SH205] gi|262312770|gb|EEY93855.1| guanine deaminase (Guanase) (guanine aminase) (guanine aminohydrolase) (GAH) (GDEase) [Acinetobacter junii SH205] Length = 151 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 1/126 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 F+ A++ A R P A+ V NN+IIS N+ + D TAHAE+LA+R Sbjct: 2 DNQKFIQQAVDLALENVKRGGRPFAALVVKNNEIISTGVNQIKLTNDPTAHAELLALREA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFYTLAT 121 R+LS L + +Y + +PC MC AAI +A I ++++ SN + + L Sbjct: 62 GRLLSTPNLEDCTVYASGQPCPMCLAAIRMAGISKVFFAFSNTDAEPFGLSTAKIAELLR 121 Query: 122 CHHSPE 127 + Sbjct: 122 VEPQFQ 127 >gi|75764881|ref|ZP_00744241.1| Cytosine deaminase family [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74487631|gb|EAO51487.1| Cytosine deaminase family [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 104 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 47/85 (55%) Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + LYVTLEPC MCA I L+R++R+ YGAS+PKGG T +H Sbjct: 5 KNRTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNH 64 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E+ ++ +FF+E R Sbjct: 65 QCEVVTGVLEEECGTLLTNFFRELR 89 >gi|330967403|gb|EGH67663.1| cytosine deaminase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 145 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EAQ IP+G+V V KII R NR + T H E+ A+ R Sbjct: 2 DAFMQAAIDEAQLGLDEGGIPIGSVIVHAGKIIGRGHNRRVQEGSATRHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + E LY TL PC MC+ AI L IR++ G + G E Sbjct: 62 QPAS-VYREAVLYTTLSPCAMCSGAILLYGIRKVIVGENQSFMGEEE----LLRSRGV-- 114 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 E+ + +R + ++Q F ++ Sbjct: 115 QIEV---LDNERCKHMMQGFIADK 135 >gi|47156908|gb|AAT12300.1| cytidine and deoxycytidylate deaminase-like protein [Antonospora locustae] Length = 156 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 17/146 (11%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM A+ EA+ A E+PVG V V + +ISR N D AHAE++A+R Sbjct: 1 MDYNSQFMDEAVSEAEKALEAGEVPVGCVVVREDAVISRGHNMTNRESDPLAHAELVALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR-RLYYGASNPKGGGIENGTQFYTL 119 + Y+T EPC MC L RIR R++YG NP GG + Sbjct: 61 HCASA------ESLVFYITCEPCIMCLG--VLGRIRARVFYGCRNPIFGGT-TVLGGVSE 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145 A C H + + + +++Q FF Sbjct: 112 ALCTH-------VHRESAVRLLQRFF 130 >gi|303276308|ref|XP_003057448.1| predicted protein [Micromonas pusilla CCMP1545] gi|226461800|gb|EEH59093.1| predicted protein [Micromonas pusilla CCMP1545] Length = 189 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 49/154 (31%), Positives = 70/154 (45%), Gaps = 11/154 (7%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM- 61 M AL EA A R E+PVG V VL+N+I++R NR E ++ T HAE AI Sbjct: 7 DDERHMRAALAEATAALDRWEVPVGCVLVLDNEIVARGSNRTNERRNGTRHAEFEAIDAL 66 Query: 62 ---GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + + LYVT EPC MCA A+SL R + YG N K GG + Sbjct: 67 LAAHANDANAARFEDCVLYVTCEPCIMCAGALSLLGCRAVVYGCGNDKFGGNGSILSDGG 126 Query: 119 LA-------TCHHSPEIYPGISEQRSRQIIQDFF 145 A + G+ + + ++++ F+ Sbjct: 127 DAAASNGARGARRTYPSVGGLFAEDAVELLRRFY 160 >gi|45185761|ref|NP_983477.1| ACR075Cp [Ashbya gossypii ATCC 10895] gi|44981516|gb|AAS51301.1| ACR075Cp [Ashbya gossypii ATCC 10895] Length = 245 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 12/153 (7%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILA 58 M + M A+ A+ A E PV V V +++II+ N AHAE A Sbjct: 4 MTQH---MRTAIRLARYALDHGETPVACVFVHTPSDQIIAYGMNDTNRSLTGIAHAEFGA 60 Query: 59 IRMGCRILSQEI---LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 I + ++ EV +YVT+EPC MCA+A+ I R+ +G N + GG + Sbjct: 61 IAQVQELFGEQDASIFKEVTVYVTVEPCVMCASALKQLGIGRVIFGCGNERFGGNGSILA 120 Query: 116 FYTL---ATCHHSPEIYPGISEQRSRQIIQDFF 145 A + I PG+ + + +++ F+ Sbjct: 121 VQRDTSTAPQNRHLAI-PGVLRREAIMLLRYFY 152 >gi|213969586|ref|ZP_03397722.1| cytosine deaminase [Pseudomonas syringae pv. tomato T1] gi|301383360|ref|ZP_07231778.1| cytosine deaminase [Pseudomonas syringae pv. tomato Max13] gi|302058808|ref|ZP_07250349.1| cytosine deaminase [Pseudomonas syringae pv. tomato K40] gi|302134497|ref|ZP_07260487.1| cytosine deaminase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925682|gb|EEB59241.1| cytosine deaminase [Pseudomonas syringae pv. tomato T1] Length = 145 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EAQ IP+G+V V KII R NR + T H E+ A+ R Sbjct: 2 DAFMQAAIDEAQLGLDEGGIPIGSVIVHAGKIIGRGHNRRVQEGSATRHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + E LY TL PC MC+ AI L IR++ G ++ G E Sbjct: 62 QPAS-VYREAVLYTTLSPCAMCSGAILLYGIRKVIVGENHSFMGEEE----LLRSRGV-- 114 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 E+ + +R + ++Q F ++ Sbjct: 115 QIEV---LDNERCKHMMQGFISDK 135 >gi|28868808|ref|NP_791427.1| cytosine deaminase [Pseudomonas syringae pv. tomato str. DC3000] gi|28852047|gb|AAO55122.1| cytosine deaminase [Pseudomonas syringae pv. tomato str. DC3000] Length = 145 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A++EAQ IP+G+V V KII R NR + T H E+ A+ R Sbjct: 2 DAFMQAAIDEAQLGLDEGGIPIGSVIVHAGKIIGRGHNRRVQEGSATRHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + E LY TL PC MC+ AI L IR++ G ++ G E Sbjct: 62 QPAS-VYREAVLYTTLSPCAMCSGAILLYGIRKVIVGENHSFMGEEE----LLRSRGV-- 114 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 E+ + +R + ++Q F ++ Sbjct: 115 QIEV---LDNERCKHMMQGFIADK 135 >gi|224125580|ref|XP_002319621.1| predicted protein [Populus trichocarpa] gi|222857997|gb|EEE95544.1| predicted protein [Populus trichocarpa] Length = 186 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 37/100 (37%), Positives = 58/100 (58%), Gaps = 1/100 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F+S A+EEA + P GAV V N++++ N + D TAHAE+ IR Sbjct: 29 DRDHKFLSRAVEEAYKGVECGDGGPFGAVVVRNDEVVMSCHNMVLKNTDPTAHAEVTVIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 C+ L++ L + ++Y + EPC MC AI L+R++RL Y Sbjct: 89 EACKKLNRIELSDCEIYASCEPCPMCFGAIHLSRLKRLVY 128 >gi|56965577|ref|YP_177311.1| guanine deaminase [Bacillus clausii KSM-K16] gi|56911823|dbj|BAD66350.1| guanine deaminase [Bacillus clausii KSM-K16] Length = 156 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 1/115 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +++++ + A + P A+ V N II + N D TAHAE++AIR Sbjct: 2 DHSMYLAKTIHLAAESIQSGGGPFAAIIVDPNGAIIGQGTNSVTNDNDPTAHAEVVAIRD 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 C ++ L LY + EPC MC AI AR + +Y+ A+ + F Sbjct: 62 ACNTINDFQLEGCTLYTSCEPCPMCLGAIYWARPKAVYFAATQEDAAAVGFDDAF 116 >gi|224130724|ref|XP_002328360.1| predicted protein [Populus trichocarpa] gi|222838075|gb|EEE76440.1| predicted protein [Populus trichocarpa] Length = 184 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 1/100 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F++ A+EEA + P GAV V N++II N + D TAHAE+ A+R Sbjct: 27 DRDHKFLTRAVEEAYKGVECGDGGPFGAVVVQNDEIIMSCHNMVLKNTDPTAHAEVTAVR 86 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 C+ L++ L + ++Y + EPC MC AI L+R++RL Y Sbjct: 87 EACKKLNRIELSDCEIYASCEPCPMCFGAIHLSRVKRLVY 126 >gi|70733728|ref|YP_257368.1| guanine deaminase [Pseudomonas fluorescens Pf-5] gi|68348027|gb|AAY95633.1| guanine deaminase, putative [Pseudomonas fluorescens Pf-5] Length = 153 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M ++ A+ A+ + P GA+ V N ++++ A N +D TAHAE+LAIR Sbjct: 1 MHDDQHYLQQAVALARRNVEQGGRPFGALLVRNGRVLAEAVNEIHLSQDPTAHAEMLAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 R L L + +Y + +PC MC AA+ L + R + ASN + Sbjct: 61 AASRQLG-PRLDDCVIYASGQPCPMCLAAMYLCGVSRAVFAASNEQA 106 >gi|261330463|emb|CBH13447.1| deaminase, putative [Trypanosoma brucei gambiense DAL972] Length = 225 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 72/183 (39%), Gaps = 40/183 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNK-----------------IISRAGNRNREL 47 +VFM AL+EA A E+PVG V V + I++R N Sbjct: 25 DVFMQAALKEATCALEEGEVPVGCVLVKADSSTAAQAQAGDDLALQKLIVARGRNATNRK 84 Query: 48 KDVTAHAEILA----IRMGCRILS------------QEILPEVDLYVTLEPCTMCAAAIS 91 AHAE +A +R S + L + LYV +EPC MCAA + Sbjct: 85 GHALAHAEFVAVEELLRQATAGTSENIGGGGNCGAVSQDLADYVLYVVVEPCIMCAAMLL 144 Query: 92 LARIRRLYYGASNPKGGGIENGTQFYT-------LATCHHSPEIYPGISEQRSRQIIQDF 144 R+R++Y+G +NP+ GG + E G + + ++Q F Sbjct: 145 YNRVRKVYFGCTNPRFGGNGTVLSVHNSYKGCSGEDAAIVGYESCGGYRAEEAVVLLQQF 204 Query: 145 FKE 147 ++ Sbjct: 205 YRR 207 >gi|227509717|ref|ZP_03939766.1| guanine deaminase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190641|gb|EEI70708.1| guanine deaminase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 160 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 1/116 (0%) Query: 5 NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + FMS A +EA+N + P GAV I+ A N+ + +D TAHAEI AIR Sbjct: 7 DQFMSLAAKEAENNLRTGDGGPFGAVIANGQDILVTAHNQVLKDQDPTAHAEITAIRKAT 66 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + L L LY + PC MC AI + I+ YYG + I + Sbjct: 67 KKLGSYDLSGYTLYTSCYPCPMCLGAIIWSNIKVAYYGNTAKDAAKIGFRDDYIYD 122 >gi|207343953|gb|EDZ71253.1| YJL035Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 250 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 13/156 (8%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR 60 + M A+ A+ A +E PV + V ++++ N + AHAE + I Sbjct: 2 QHVKHMRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGID 61 Query: 61 MGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 +L ++ ++ LYVT+EPC MCA+A+ I ++ +G N + GG Sbjct: 62 QIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGGNGTVLSV 121 Query: 117 YTL-----ATCHHS--PEIYPGISEQRSRQIIQDFF 145 + + E PGI + + +++ F+ Sbjct: 122 NHDTCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 157 >gi|224367573|ref|YP_002601736.1| putative cytidine/deoxycytidylate deaminase [Desulfobacterium autotrophicum HRM2] gi|223690289|gb|ACN13572.1| putative cytidine/deoxycytidylate deaminase [Desulfobacterium autotrophicum HRM2] Length = 181 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 12/153 (7%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA------HAEI 56 +M AL AQ A + E PVGAV V + +++++ +T HAE+ Sbjct: 9 NDAYYMELALASAQKAFDQGEFPVGAVIVCDGRVVAQGH--RVGTGALTGRPSEIDHAEM 66 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 A++ + ++ T+EPC MC +AI L+ I+++ Y +P GGG Sbjct: 67 RALKELEGLPLGFDPAGAVIFSTMEPCLMCFSAIILSGIKKIVYAYEDPMGGGTC--CDL 124 Query: 117 YTLATCHHS--PEIYPGISEQRSRQIIQDFFKE 147 L + + +++PG+ ++S + FF++ Sbjct: 125 GQLPPLYKTCGIKVFPGVLRKKSLDLFVKFFQK 157 >gi|34557713|ref|NP_907528.1| cytosine deaminase [Wolinella succinogenes DSM 1740] gi|34483430|emb|CAE10428.1| CYTOSINE DEAMINASE [Wolinella succinogenes] Length = 145 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 10/143 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ ALEEAQ IP+G+V V++ KI+ R N+ + HAE+ + R Sbjct: 2 DKFLEAALEEAQKGLDEGGIPIGSVLVIDGKIVGRGHNQRVQKGSSILHAEMDCLENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 LS + LY TL PC MC+ AI L I +L G + G Sbjct: 62 -LSASDYRKATLYSTLSPCDMCSGAILLYGIPKLVIGENQTFRG--------PEAYVKSR 112 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 E+ I++ + R++++ F ++ Sbjct: 113 GVEVKV-INDPKCRELMEAFIQK 134 >gi|326330934|ref|ZP_08197234.1| guanine deaminase [Nocardioidaceae bacterium Broad-1] gi|325951292|gb|EGD43332.1| guanine deaminase [Nocardioidaceae bacterium Broad-1] Length = 159 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 48/117 (41%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +++ A+ A P GA+ + + ++ NR D +AHAEI+AIR Sbjct: 2 TDTMWLEQAVALAVRNVNNGGGPFGAIILRDGILLGTGQNRVTRDLDPSAHAEIVAIRSA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 C+ L LY + EPC MC A AR+ R+ Y A + + Sbjct: 62 CKEADSFSLAGCTLYTSCEPCPMCLATALWARLDRVVYAADRDDAAKGGFDDRAFYD 118 >gi|170751176|ref|YP_001757436.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM 2831] gi|170657698|gb|ACB26753.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM 2831] Length = 160 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 8/145 (5%) Query: 2 KKGNVFMSCALEEAQNAAL---RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 FM+ A+ ++ +L + G V V + +II+ NR D T H EI A Sbjct: 3 DNHEKFMARAIALSEKTSLVDSAGGV-FGCVIVQDGEIIAEGANRVVAENDPTWHGEIEA 61 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG---GGIENGTQ 115 IR C+ L LY + EPC MC AA A ++ +YY A GG ++ Sbjct: 62 IRKACKAQGSFKLRNATLYTSAEPCPMCMAAAYWAGVKNVYYAAQVEDALEYGGFDDSMI 121 Query: 116 FYTLAT-CHHSPEIYPGISEQRSRQ 139 + L I + + + Sbjct: 122 YAELKKDVGERSIPTQQIMREEAVE 146 >gi|323304324|gb|EGA58097.1| Tad2p [Saccharomyces cerevisiae FostersB] Length = 242 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 13/156 (8%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR 60 + M A+ A+ A +E PV + V ++++ N + AHAE + I Sbjct: 2 QHIKHMRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGID 61 Query: 61 MGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 +L ++ ++ LYVT+EPC MCA+A+ I ++ +G N + GG Sbjct: 62 QIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGGNGTVLSV 121 Query: 117 YTL-----ATCHHS--PEIYPGISEQRSRQIIQDFF 145 + + E PGI + + +++ F+ Sbjct: 122 NHDTCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 157 >gi|225851435|ref|YP_002731669.1| riboflavin biosynthesis protein RibD [Persephonella marina EX-H1] gi|225645583|gb|ACO03769.1| riboflavin biosynthesis protein RibD [Persephonella marina EX-H1] Length = 365 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 45/162 (27%), Positives = 67/162 (41%), Gaps = 23/162 (14%) Query: 1 MKK--GNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M++ +FM AL A + VGAV V + KII + ++ + HAE Sbjct: 1 MERVNDEIFMKEALRLAELRKGLTHPNPTVGAVIVKDGKIIGKGFHKKAGM----PHAER 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 AI + L +YVTLEPC C AI RI+R+ +P Sbjct: 57 EAINDAIKK--GFNLEGSTMYVTLEPCCHYGRTPPCTEAIIDRRIKRVVIATVDPNPQVS 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 G + H E G+ + +R++ +DFF KE+R Sbjct: 115 GKGVEILKK----HGIETVVGVLQDEARKLNEDFFVYIKEKR 152 >gi|294654357|ref|XP_456407.2| DEHA2A01584p [Debaryomyces hansenii CBS767] gi|199428817|emb|CAG84359.2| DEHA2A01584p [Debaryomyces hansenii] Length = 321 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 13/152 (8%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL A + NE PV + V N+I+S N + T HAE +AI Sbjct: 11 MAIALFIGYRAMINNETPVACILVSRSTNQILSIGYNDTNRSLNGTRHAEFIAIDKVMSQ 70 Query: 66 LSQEI----------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + +V LYVT+EPC MCA+A+ I + YG N + GG Sbjct: 71 IPVHDRSDIAKIQGFFGDVILYVTVEPCIMCASALKQIGIGYVVYGCGNDRFGGNGTILS 130 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + + + + Y G+ + Q++++F+ + Sbjct: 131 IHQDK-INKAYQSYGGVLRTEAVQLLRNFYIQ 161 >gi|255972217|ref|ZP_05422803.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T1] gi|255963235|gb|EET95711.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T1] Length = 102 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 39/92 (42%), Positives = 54/92 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ FM A+ EA+ A E+P+GAV V +II R N ++ TAHAE+ AI+ Sbjct: 11 EEKEFFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQE 70 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93 CR + L E L+VTLEPC MC+ A+ LA Sbjct: 71 ACRGIENWRLEETQLFVTLEPCPMCSGAMLLA 102 >gi|83767797|dbj|BAE57936.1| unnamed protein product [Aspergillus oryzae] Length = 142 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 12/149 (8%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M+ F+ ALEEA+ +P+GA V + KI+ R N + T HAE+ A+ Sbjct: 1 MESDPGFV-AALEEAKQGYAEGGVPIGAALVSKDGKILGRGHNMRVQKGSATLHAEMSAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R+ + +Y TL PC MC A L +++R+ G + GG E Sbjct: 60 ENSGRLPASAY-EGATMYTTLSPCDMCTGACILYKVKRVVIGENKSFMGGEEYLK----- 113 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + E+ ++ + +Q+++ F KE+ Sbjct: 114 ---NRGKELVV-LNNEECKQLMEKFMKEK 138 >gi|229070516|ref|ZP_04203757.1| Cytosine deaminase [Bacillus cereus F65185] gi|228712598|gb|EEL64532.1| Cytosine deaminase [Bacillus cereus F65185] Length = 169 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 7/150 (4%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ F+ ALEEA+ A N PVGAV V NN +I+R NR KD+TAHAEI AIR Sbjct: 4 ERDRYFLEMALEEAEKALKENTYPVGAVIVDGNNNVIARGRNRVHPQKDITAHAEIDAIR 63 Query: 61 MGCRILSQEILPE--VDLYVTLEPCTMCAAAISLARIRRLYYGASNP-KGGGIENGTQFY 117 + + +Y TLEPC MC I A+I+R+ + ++ GG + Sbjct: 64 NAGEAMFDAKIKNEKFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFGGYKKIKNAL 123 Query: 118 TLATCHHSPEIYPGISEQ---RSRQIIQDF 144 + +I E R +++++ + Sbjct: 124 VFEGKFNKIDIVEEPFEDLKTRQKELMRQW 153 >gi|299134252|ref|ZP_07027445.1| CMP/dCMP deaminase zinc-binding [Afipia sp. 1NLS2] gi|298590999|gb|EFI51201.1| CMP/dCMP deaminase zinc-binding [Afipia sp. 1NLS2] Length = 154 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 37/107 (34%), Positives = 52/107 (48%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M F+ A+E A+ + P GAV V + K+I+ N E D T HAE+ AIR Sbjct: 1 MSDAKGFLCEAIELARENVRKGGRPFGAVLVKDGKVIATGVNEILETGDPTTHAELQAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 + +L L +Y + PC MC +A+ L IR Y SN +G Sbjct: 61 VASHVLGSPRLDGCTIYASGHPCPMCLSAMHLTGIREFAYAYSNEEG 107 >gi|84497975|ref|ZP_00996772.1| putative deaminase [Janibacter sp. HTCC2649] gi|84381475|gb|EAP97358.1| putative deaminase [Janibacter sp. HTCC2649] Length = 158 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 31/99 (31%), Positives = 46/99 (46%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M ++ A++ A P GAV V +I NR D TAHAE++A+R Sbjct: 1 MTDDQKWLDRAIDLAIANVSGGGGPFGAVVVRGGDVIGEGTNRVTLDLDPTAHAEVVALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 CR + LP +Y + EPC +C +A AR+ + Sbjct: 61 NACREVGDFSLPGATVYASCEPCPLCLSASLWARVDAVV 99 >gi|323333035|gb|EGA74437.1| Tad2p [Saccharomyces cerevisiae AWRI796] Length = 244 Score = 133 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 13/151 (8%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ A+ A +E PV + V ++++ N + AHAE + I + Sbjct: 1 MRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 60 Query: 66 LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-- 119 L ++ ++ LYVT+EPC MCA+A+ I ++ +G N + GG Sbjct: 61 LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGGNGTVLSVNHDTC 120 Query: 120 ---ATCHHS--PEIYPGISEQRSRQIIQDFF 145 + + E PGI + + +++ F+ Sbjct: 121 TLVPKNNSAAGYESIPGILRKEAIMLLRYFY 151 >gi|113971133|ref|YP_734926.1| cytosine deaminase [Shewanella sp. MR-4] gi|113885817|gb|ABI39869.1| Cytosine deaminase [Shewanella sp. MR-4] Length = 145 Score = 133 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ A++EA+ IP+G+V V++ KI++R N+ + HAE+ + R Sbjct: 2 DEFLQAAIDEAKQGLAEGGIPIGSVLVIDGKIVARGHNKRVQQGSAVLHAEMDCLENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + + + LY TL PC MC+ AI L I ++ G + G + Y + Sbjct: 62 LTAADY-QKATLYSTLSPCDMCSGAILLYGIPKVVVGENVTFQG-----PEAYVQSR--- 112 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 E+ + +Q+++DF + Sbjct: 113 GVEVTV-VDNHECKQLMRDFIAAK 135 >gi|119486171|ref|ZP_01620231.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lyngbya sp. PCC 8106] gi|119456662|gb|EAW37791.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lyngbya sp. PCC 8106] Length = 144 Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 11/145 (7%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG-- 62 +M ALEEA+ ++P GAV V ++I+ + N + DVTAHAEI +R Sbjct: 4 EDYMKIALEEAKK----GDMPYGAVLVKEDQIVVQGHNTAQRDNDVTAHAEINVLRQFTL 59 Query: 63 -CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN-GTQFYTLA 120 + S + L LY T EPC MCAAA + + +GAS + + + A Sbjct: 60 ENKSYSIDALKGYTLYTTCEPCPMCAAACVWVGLSEIVFGASTQQLIQLGSQQIDLSCEA 119 Query: 121 TCHHSPE---IYPGISEQRSRQIIQ 142 + I GI + + + Sbjct: 120 VVKKGFQDIKITQGILAEDCLALFK 144 >gi|282164705|ref|YP_003357090.1| cytosine deaminase [Methanocella paludicola SANAE] gi|282157019|dbj|BAI62107.1| cytosine deaminase [Methanocella paludicola SANAE] Length = 145 Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 10/143 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N FM AL+EA+ IP+G+V V++ I+ R NR + HAE+ + R Sbjct: 2 NEFMRAALDEAKKGLREGGIPIGSVLVVDGVIVGRGHNRRVQQGSTIKHAEMDCLESAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + + LY TL PC MC+ A+ L I ++ G N G E ++ Sbjct: 62 LRAATY-RKSTLYSTLSPCDMCSGAVLLYGIPKVVIG-ENMNFKGPE---EYVRDRG--- 113 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 ++ +++Q +++ DF ++ Sbjct: 114 -VDVTV-LNDQECIELMSDFIEK 134 >gi|190409464|gb|EDV12729.1| tRNA-specific adenosine deaminase 2 [Saccharomyces cerevisiae RM11-1a] Length = 250 Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 13/156 (8%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR 60 + M A+ A+ A +E PV + V ++++ N + AHAE + I Sbjct: 2 QHVKHMRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGID 61 Query: 61 MGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 +L ++ ++ LYVT+EPC MCA+A+ I ++ +G N + GG Sbjct: 62 QIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGGNGTVLSV 121 Query: 117 YTL-----ATCHHS--PEIYPGISEQRSRQIIQDFF 145 + + E PGI + + +++ F+ Sbjct: 122 NHDTCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 157 >gi|92114624|ref|YP_574552.1| cytosine deaminase [Chromohalobacter salexigens DSM 3043] gi|91797714|gb|ABE59853.1| Cytosine deaminase [Chromohalobacter salexigens DSM 3043] Length = 149 Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A+EEA+ +P+G+V V +II R N+ ++ H E+ A+ R Sbjct: 2 DPFMQAAIEEARKGYEAGGVPIGSVLVHRGEIIGRGHNQRQQRGSAILHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L + E LY TL PC MC+ AI L I + G + G + T H Sbjct: 62 -LPAHVYREAVLYTTLSPCPMCSGAIVLYGIPEVVIGENTTFKGDEALLRERGVTLTIH- 119 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 + + + ++ F ER Sbjct: 120 --------DDSQCKSLMAQFIAER 135 >gi|206968817|ref|ZP_03229772.1| cytosine deaminase [Bacillus cereus AH1134] gi|206735858|gb|EDZ53016.1| cytosine deaminase [Bacillus cereus AH1134] Length = 169 Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 7/150 (4%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ F+ ALEEA+ A N PVGAV V NN +I+R NR KD+TAHAEI AIR Sbjct: 4 ERDRYFLQMALEEAEMALKENTYPVGAVIVDGNNNVIARGRNRVHPQKDITAHAEIDAIR 63 Query: 61 MGCRILSQEILPE--VDLYVTLEPCTMCAAAISLARIRRLYYGASNP-KGGGIENGTQFY 117 + + +Y TLEPC MC I A+I+R+ + ++ GG + Sbjct: 64 NAGEAMFDAKIKNEKFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFGGYKKIKNAL 123 Query: 118 TLATCHHSPEIYPGISEQ---RSRQIIQDF 144 + +I E R +++++ + Sbjct: 124 VFEGKFNKIDIVEEPFEDLKTRQKELMRQW 153 >gi|158334126|ref|YP_001515298.1| cytosine/adenosine deaminase [Acaryochloris marina MBIC11017] gi|158304367|gb|ABW25984.1| Cytosine/adenosine deaminase [Acaryochloris marina MBIC11017] Length = 150 Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 14/144 (9%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 ++FM A++EAQ IP+G+V V N I+ R N + HAE+ A+ R Sbjct: 4 DLFMDAAIQEAQRGLAAGGIPIGSVVVKNGTIVGRGHNLRVQQGSAILHAEMSALETLGR 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + +V LY TL PC+MC AI L +I R+ G ++ G A Sbjct: 64 QPAMFY-QDVTLYTTLSPCSMCTGAILLYKIPRVVIGENHTFMG---------EEALLKS 113 Query: 125 S-PEIYPGISE-QRSRQIIQDFFK 146 ++ + + + RQ++Q F K Sbjct: 114 RGVKVT--VLDLPQCRQMMQAFIK 135 >gi|238486578|ref|XP_002374527.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357] gi|317144152|ref|XP_001819938.2| cytosine deaminase [Aspergillus oryzae RIB40] gi|220699406|gb|EED55745.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357] Length = 148 Score = 133 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 12/149 (8%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M+ F+ ALEEA+ +P+GA V + KI+ R N + T HAE+ A+ Sbjct: 1 MESDPGFV-AALEEAKQGYAEGGVPIGAALVSKDGKILGRGHNMRVQKGSATLHAEMSAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R+ + +Y TL PC MC A L +++R+ G + GG E Sbjct: 60 ENSGRLPASAY-EGATMYTTLSPCDMCTGACILYKVKRVVIGENKSFMGGEEYLK----- 113 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + E+ ++ + +Q+++ F KE+ Sbjct: 114 ---NRGKELVV-LNNEECKQLMEKFMKEK 138 >gi|171909718|ref|ZP_02925188.1| CMP/dCMP deaminase, zinc-binding protein [Verrucomicrobium spinosum DSM 4136] Length = 169 Score = 133 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 53/102 (51%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A++ A P GAV V ++ISR N D TAHAE+LA+R ++ Sbjct: 15 AFLQEAIDLAVANISEGGRPFGAVVVKYGRVISRGVNETHLSNDPTAHAEMLAVRAASQV 74 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 L +L LY + PC MC AA+ +A + ++Y +NP+ Sbjct: 75 LQSPLLESCTLYASGHPCPMCLAAMRMAGVTDVFYAFTNPEA 116 >gi|24372975|ref|NP_717017.1| cytosine deaminase [Shewanella oneidensis MR-1] gi|24347125|gb|AAN54462.1|AE015583_7 cytosine deaminase [Shewanella oneidensis MR-1] Length = 145 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ A++EA+ IP+G+V V++ KII+R N+ + HAE+ + R Sbjct: 2 DEFLQAAIDEAKQGLAEGGIPIGSVLVIDGKIIARGHNKRVQQGSAVLHAEMDCLENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + + + LY TL PC MC+ AI L I ++ G + G + Y + Sbjct: 62 LTAADY-QKATLYSTLSPCDMCSGAILLYGIPKVVVGENVTFQG-----PEAYVQSR--- 112 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 ++ + +Q+++DF + Sbjct: 113 GVDVTV-VDNPECKQLMRDFIAAK 135 >gi|307544360|ref|YP_003896839.1| cytosine deaminase [Halomonas elongata DSM 2581] gi|307216384|emb|CBV41654.1| cytosine deaminase [Halomonas elongata DSM 2581] Length = 152 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 44/142 (30%), Positives = 62/142 (43%), Gaps = 14/142 (9%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM AL+EA+ IP+G+V V I+ NR +L H E+ A+ R Sbjct: 2 DHFMQAALDEARAGLDEGGIPIGSVLVHRGVILGGGRNRRVQLGSTVLHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH- 123 S +I E LY TL PC MC AI L I R+ G EN T A Sbjct: 62 -QSADIYRESTLYTTLSPCAMCTGAILLYGIPRVVIG---------ENRTFLGEEALLRS 111 Query: 124 HSPEIYPGISEQ-RSRQIIQDF 144 H E+ + ++ +++DF Sbjct: 112 HGVEVE--VLQEPECIALMEDF 131 >gi|332185432|ref|ZP_08387180.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Sphingomonas sp. S17] gi|332014410|gb|EGI56467.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Sphingomonas sp. S17] Length = 164 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 8/148 (5%) Query: 1 MKK--GNVFMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M K +M AL+ A+ + + P+G V V ++++ N+ EL D TAHAE++ Sbjct: 1 MDKATDERWMRLALQVARSKGSDPSTSPLGCVIVRGGQVLAAERNQTHELPDATAHAEMM 60 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-----GGGIEN 112 AIR C + L + LY TL+PC MC A +++ R+ YGA Sbjct: 61 AIRRACESVGDLELRDATLYSTLQPCGMCTMASIWSKVGRVVYGAGREDVHPMYFEARHV 120 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQI 140 T + I G + + Sbjct: 121 DTLSFIAKAYRDDIVIEGGCLAEECATL 148 >gi|156387791|ref|XP_001634386.1| predicted protein [Nematostella vectensis] gi|156221468|gb|EDO42323.1| predicted protein [Nematostella vectensis] Length = 156 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 12/158 (7%) Query: 1 MKKGNV-FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ V F+ A++ ++ + + +P GAV +NKII+ N + D TAHAE+ A Sbjct: 1 MEEYEVQFLERAVQLSKEGSSQGLGMPFGAVIAKDNKIIAETANLSFVNCDPTAHAEVSA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 IR C L L DLY + PC MC AAI A I R+YY A PK E + Sbjct: 61 IRQACSALKSRDLTGCDLYTSCYPCAMCMAAIYWASISRVYYAA--PKVSFSERWDRLEA 118 Query: 119 --LATCHHS------PEIYPGISEQRSRQIIQDFFKER 148 + + P I+ Q ++ + +++F R Sbjct: 119 SLIPELNKPDSEKSIPVIHVPALAQEAQLVAEEWFVRR 156 >gi|187780095|ref|ZP_02996568.1| hypothetical protein CLOSPO_03691 [Clostridium sporogenes ATCC 15579] gi|187773720|gb|EDU37522.1| hypothetical protein CLOSPO_03691 [Clostridium sporogenes ATCC 15579] Length = 157 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 2/113 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M K + M ++ +E P G+ V + K+I+ A N D TAH E+ AI Sbjct: 1 MDKNEI-MDLCVKSCMEGMKNHEGGPFGSAIVKDGKVIAVAHNTVIGDNDPTAHGEVNAI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 R C+ L+ L +LY T EPC MC +AI A I ++YYG + I Sbjct: 60 RQACKKLNTFDLSGCELYTTSEPCPMCMSAIIWANISKVYYGCTVEDARDIGF 112 >gi|323308420|gb|EGA61665.1| Tad2p [Saccharomyces cerevisiae FostersO] gi|323354467|gb|EGA86306.1| Tad2p [Saccharomyces cerevisiae VL3] Length = 244 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 13/151 (8%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ A+ A +E PV + V ++++ N + AHAE + I + Sbjct: 1 MRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 60 Query: 66 LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-- 119 L ++ ++ LYVT+EPC MCA+A+ I ++ +G N + GG Sbjct: 61 LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGGNGTVLSVNHDTC 120 Query: 120 ---ATCHHS--PEIYPGISEQRSRQIIQDFF 145 + + E PGI + + +++ F+ Sbjct: 121 TLVPKNNSAAGYESIPGILRKEAIMLLRYFY 151 >gi|51245328|ref|YP_065212.1| cytidine and deoxycytidylate deaminase family protein [Desulfotalea psychrophila LSv54] gi|50876365|emb|CAG36205.1| related to cytidine and deoxycytidylate deaminase family protein [Desulfotalea psychrophila LSv54] Length = 169 Score = 133 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 40/147 (27%), Positives = 64/147 (43%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M FM AL +A+ A + E PVG V V ++++ RN + HAE+ A+R Sbjct: 1 MDVDESFMEVALAQAERALVAGEFPVGCVIVSQGEVVAVGERRNSVSANELDHAEMNALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + ++ +Y T+EPC MC +A+ + +R + Y + GGG Sbjct: 61 TLLAQGQPADMEKLVVYSTMEPCLMCYSALIVNGVRNIVYAYEDAMGGGTSLPLSQLAPL 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147 I P + RS ++ Q FF Sbjct: 121 YAGIRMNIRPHVLRARSLRLFQQFFSR 147 >gi|114048372|ref|YP_738922.1| cytosine deaminase [Shewanella sp. MR-7] gi|113889814|gb|ABI43865.1| Cytosine deaminase [Shewanella sp. MR-7] Length = 145 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ A++EA+ IP+G+V V++ KI++R N+ + HAE+ + R Sbjct: 2 DEFLQAAIDEAKQGLAEGGIPIGSVLVIDGKIVARGHNKRVQQGSAVLHAEMDCLENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + + + LY TL PC MC+ AI L I ++ G + G + Y + Sbjct: 62 LTAADY-QKATLYSTLSPCDMCSGAILLYGIPKVVVGENVTFQG-----PEAYVQSR--- 112 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 E+ + +Q+++DF + Sbjct: 113 GVEVTV-VDNYECKQLMRDFIAAK 135 >gi|300711978|ref|YP_003737792.1| cytosine deaminase [Halalkalicoccus jeotgali B3] gi|299125661|gb|ADJ16000.1| cytosine deaminase [Halalkalicoccus jeotgali B3] Length = 280 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 2/141 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + FM A+E A+ AA R + P G+V V + +I+ NR D+ H E+ R Sbjct: 136 MNE-ERFMRRAIELAREAAERGDNPFGSVLVHDGEIVMEDSNRVATEDDIRRHPELTLAR 194 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTL 119 + R L EI E +Y + EPC MCA + A R+ Y S P+ + Sbjct: 195 LAVRELDPEIRSETTMYTSTEPCPMCAGGMVYAGFDRVVYATSGPEIAAFTGHDPGVRAA 254 Query: 120 ATCHHSPEIYPGISEQRSRQI 140 E+ + + + Sbjct: 255 EILDGVTEVEGPFCHEAALAL 275 >gi|115388491|ref|XP_001211751.1| cytosine deaminase [Aspergillus terreus NIH2624] gi|114195835|gb|EAU37535.1| cytosine deaminase [Aspergillus terreus NIH2624] Length = 148 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 12/149 (8%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M++ F+ A+EEA+ A +P+GA V + KI+ R N + T HAE+ A+ Sbjct: 1 MEQDPGFI-AAVEEAKKGAAEGGVPIGAALVSKDGKILGRGHNMRVQKGSATLHAEMAAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R+ + +Y TL PC MC A L +I R+ G + GG Sbjct: 60 ENSGRLPASAY-AGATMYTTLSPCDMCTGACILYKINRVVIGENQNFLGG--------EE 110 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + E+ + +Q+++ F KE+ Sbjct: 111 LLLNKGKEVVV-LDHAECKQLMETFIKEK 138 >gi|298293557|ref|YP_003695496.1| CMP/dCMP deaminase zinc-binding protein [Starkeya novella DSM 506] gi|296930068|gb|ADH90877.1| CMP/dCMP deaminase zinc-binding protein [Starkeya novella DSM 506] Length = 158 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 1/102 (0%) Query: 1 MKKGNVFMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M FM A+E ++ P G V V + I+ N D T+H E+ AI Sbjct: 1 MSTPEAFMRRAIEISREKMRSDGSAPFGCVIVKDGVIVGEGVNNVVNNHDATSHGEVEAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 R R L L +LY T EPC MC A++ A+I R+YY Sbjct: 61 RDAGRRLKSWDLSGCELYTTCEPCEMCVASMFWAKISRMYYA 102 >gi|294508554|ref|YP_003572613.1| Conserved hypothetical protein containing cytidine and deoxycytidylate deaminase zinc-binding protein [Salinibacter ruber M8] gi|294344883|emb|CBH25661.1| Conserved hypothetical protein containing cytidine and deoxycytidylate deaminase zinc-binding protein [Salinibacter ruber M8] Length = 158 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 42/145 (28%), Positives = 59/145 (40%), Gaps = 8/145 (5%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ A++EA +A P GAV V ++ RAGN D T HAE +R Sbjct: 9 DHERFVRAAIDEAASAQDAGNPPFGAVLVGPGGTVLDRAGNTEGRTGDCTGHAETNLVRA 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG----GGIENGTQF- 116 + E L + LY + EPC MCA AI ARI R+ +G + G Sbjct: 69 ASQEYDPERLAKATLYASTEPCAMCAGAIFWARIGRVVFGLRAERLYDMKGDAGRQLALS 128 Query: 117 --YTLATCHHSPEIYPGISEQRSRQ 139 LA + E+ + E + Sbjct: 129 CEDVLARGNREVEVVGPVLEDEAAA 153 >gi|29654671|ref|NP_820363.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii RSA 493] gi|153209491|ref|ZP_01947406.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|154706754|ref|YP_001424808.1| hypothetical protein CBUD_1461 [Coxiella burnetii Dugway 5J108-111] gi|161830445|ref|YP_001597217.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii RSA 331] gi|165923928|ref|ZP_02219760.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii RSA 334] gi|212212253|ref|YP_002303189.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii CbuG_Q212] gi|212218777|ref|YP_002305564.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii CbuK_Q154] gi|29541939|gb|AAO90877.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii RSA 493] gi|120575344|gb|EAX31968.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|154356040|gb|ABS77502.1| hypothetical protein CBUD_1461 [Coxiella burnetii Dugway 5J108-111] gi|161762312|gb|ABX77954.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii RSA 331] gi|165916620|gb|EDR35224.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii RSA 334] gi|212010663|gb|ACJ18044.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii CbuG_Q212] gi|212013039|gb|ACJ20419.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii CbuK_Q154] Length = 159 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 4/151 (2%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 F+ + +N+ N P GA+ V ++KII++ NR D TAH+EI+AIR Sbjct: 4 NNDKQFLHEVFDLVKNSISHNLGGPFGALIVRDSKIIAKGVNRVTTSNDPTAHSEIVAIR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL- 119 C+ L+ L LYV EPC MC A ARI ++ + + I +Y Sbjct: 64 EACQKLNTFNLTGCYLYVNCEPCPMCLGACYWARIDKIIFSLTKKDAENIGFKDAYYYEQ 123 Query: 120 --ATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + + + + + + K++ Sbjct: 124 IRKPLSQRDLVMVQCLREEALPLFEAWDKKK 154 >gi|146179283|ref|XP_001470903.1| conserved hypothetical protein [Tetrahymena thermophila] gi|146144561|gb|EDK31523.1| conserved hypothetical protein [Tetrahymena thermophila SB210] Length = 160 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 1/126 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M F+ A++EA+ A + + P G V V + KII RA NR D TAHAE +AI Sbjct: 4 MNDHQYFIQEAIKEAELAVITGDGEPFGCVIVRDGKIIVRAHNRLYIDYDPTAHAETVAI 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R+ C+ IL + +Y + +PC MC+ AIS + +YY + + + Sbjct: 64 RLACKQEKSLILKDCIIYASAQPCPMCSTAISACGAKEVYYCVPGTQIQEAFSQITNFEE 123 Query: 120 ATCHHS 125 H Sbjct: 124 LGLHPK 129 >gi|126653720|ref|ZP_01725638.1| cytidine/deoxycytidylate deaminase family protein; probable guanine deaminase [Bacillus sp. B14905] gi|126589684|gb|EAZ83820.1| cytidine/deoxycytidylate deaminase family protein; probable guanine deaminase [Bacillus sp. B14905] Length = 132 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 2/101 (1%) Query: 1 MKKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M + FM AL+ A +NA + P GA+ V N +IIS N + D+T HAEI AI Sbjct: 1 MNQHE-FMRKALDLANENALSEHGAPFGALVVKNGQIISSGVNEVAKTNDLTNHAEIQAI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 R C L L ++Y + EPC MC +AI A++ +YY Sbjct: 60 RQACHTLQTINLEGCEMYASTEPCPMCLSAIYYAKLTTVYY 100 >gi|269838046|ref|YP_003320274.1| CMP/dCMP deaminase zinc-binding protein [Sphaerobacter thermophilus DSM 20745] gi|269787309|gb|ACZ39452.1| CMP/dCMP deaminase zinc-binding protein [Sphaerobacter thermophilus DSM 20745] Length = 148 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 55/145 (37%), Gaps = 4/145 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M ALEEA A GAV V + ++I+ N D TAHAE +A+R Sbjct: 3 DTHERYMRLALEEAAKAKAAGNGAYGAVVVRDGQVIATGRNEATTTSDPTAHAETIAVRN 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----NGTQFY 117 L L LY T +PC MC +I ++ I + GA + + Sbjct: 63 AGMALGTLDLSGCTLYATFQPCPMCCGSILVSGISTVVIGAVPDDPAQTRWPTYSVDRLV 122 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQ 142 + G+ R I+Q Sbjct: 123 EWLGYQDRVTVITGVLADECRAILQ 147 >gi|308160868|gb|EFO63335.1| Cytosine deaminase, putative [Giardia lamblia P15] Length = 165 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 4/142 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M +EA A + E+PVG V + I++ N + ++ T HAE++A+ ++ Sbjct: 1 MEECFKEASLALVEREVPVGCAIVDSDGHILATGRNATNKTRNSTYHAELVAL---AQLP 57 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S L LYVT+EPC MCAAA+S+ + + Y A N K GG + + Sbjct: 58 SGINLSNCVLYVTIEPCIMCAAALSIVGLTNIIYFARNNKFGGCGSVLDVNNHIESPWTK 117 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 I ++R+ ++Q+FF+ + Sbjct: 118 LNAKYIHDERAIYLLQEFFERK 139 >gi|192360046|ref|YP_001980851.1| cytosine deaminase [Cellvibrio japonicus Ueda107] gi|190686211|gb|ACE83889.1| cytosine deaminase [Cellvibrio japonicus Ueda107] Length = 146 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 14/148 (9%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MK + FM ALEEA+ IP+G+V V++ +I+ R N+ + HAE+ + Sbjct: 1 MK--DPFMQAALEEARKGRREGGIPIGSVLVIDGRIVGRGHNQRVQKGSCVLHAEMDCLE 58 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R+ + + LY TL PC MC+ + L I ++ + F Sbjct: 59 NAGRLKASDY-RRATLYSTLSPCDMCSGTVLLYGIPKVV----------VGENLSFQGPE 107 Query: 121 TCHHSPEIYPGISEQ-RSRQIIQDFFKE 147 S + I + +Q++QDF + Sbjct: 108 AYVRSRGVELDIRDDAECKQLMQDFIAQ 135 >gi|316971942|gb|EFV55655.1| guanine deaminase [Trichinella spiralis] Length = 161 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 1/119 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + A +EA+ ++ P GA+ V N ++++ N D TAHAE+ IR Sbjct: 7 ENTEALLKMACQEAERGVESDDGGPFGALVVKNGRVLAIGHNEVLLTNDPTAHAEVTVIR 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L L +LY + +PC MC A + I ++YY S + + Sbjct: 67 RAAAALGHWNLAGCELYTSCKPCPMCLGAALWSGIEKIYYSLSEEDAAAAGFRDKAFYD 125 >gi|46199478|ref|YP_005145.1| putative cell cycle protein mesJ-like protein [Thermus thermophilus HB27] gi|61217297|sp|Q72IF6|TILS_THET2 RecName: Full=tRNA(Ile)-lysidine synthase; AltName: Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName: Full=tRNA(Ile)-lysidine synthetase gi|46197104|gb|AAS81518.1| putative cell cycle protein mesJ-like protein [Thermus thermophilus HB27] Length = 507 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 46/131 (35%), Positives = 63/131 (48%), Gaps = 16/131 (12%) Query: 19 ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78 E+PVGAV VL +++ RA NR L+D TAHAE+L +R LYV Sbjct: 387 FREGEVPVGAVLVLPGRVL-RAHNRVEGLRDPTAHAEMLLLREAG-----PEARGGRLYV 440 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 TLEPC MC A++ A + + YGA N K G L G+ E+ Sbjct: 441 TLEPCLMCHHALAQAGV-EVVYGAENLKEGA---------LTRFGLPTRARGGVRERECA 490 Query: 139 QIIQDFFKERR 149 ++++DFF R Sbjct: 491 KLLRDFFARLR 501 >gi|55981511|ref|YP_144808.1| cell cycle protein MesJ [Thermus thermophilus HB8] gi|61217197|sp|Q5SI38|TILS_THET8 RecName: Full=tRNA(Ile)-lysidine synthase; AltName: Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName: Full=tRNA(Ile)-lysidine synthetase gi|55772924|dbj|BAD71365.1| probable cell cycle protein MesJ [Thermus thermophilus HB8] Length = 507 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 46/131 (35%), Positives = 63/131 (48%), Gaps = 16/131 (12%) Query: 19 ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78 E+PVGAV VL +++ RA NR L+D TAHAE+L +R LYV Sbjct: 387 FREGEVPVGAVLVLPGRVL-RAHNRVEGLRDPTAHAEMLLLREAG-----PEARGGRLYV 440 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 TLEPC MC A++ A + + YGA N K G L G+ E+ Sbjct: 441 TLEPCLMCHHALAQAGV-EVVYGAENLKEGA---------LTRFGLPTRARGGVRERECA 490 Query: 139 QIIQDFFKERR 149 ++++DFF R Sbjct: 491 KLLRDFFARLR 501 >gi|260889069|ref|ZP_05900332.1| riboflavin biosynthesis protein RibD [Leptotrichia hofstadii F0254] gi|260861129|gb|EEX75629.1| riboflavin biosynthesis protein RibD [Leptotrichia hofstadii F0254] Length = 371 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 22/153 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M A+E A+ A + P VGAV V K+I ++ HAE+ A+ Sbjct: 6 DEKYMRMAIELAKKGA--GPVNPNPMVGAVVVQGGKVIGTGYHKYFGE----PHAEVYAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + + + L + +YVTLEPC CA I ++R G+S+P G Sbjct: 60 DEASK--NSKDLSDATIYVTLEPCSHYGKTPPCAEKIVKLGLKRCVIGSSDPNPKVAGKG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q + E+ I ++ +I Q FFK Sbjct: 118 IQILK----NAGIEVTENILKEECDKINQVFFK 146 >gi|262038723|ref|ZP_06012083.1| riboflavin biosynthesis protein RibD [Leptotrichia goodfellowii F0264] gi|261747275|gb|EEY34754.1| riboflavin biosynthesis protein RibD [Leptotrichia goodfellowii F0264] Length = 382 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 45/153 (29%), Positives = 63/153 (41%), Gaps = 21/153 (13%) Query: 2 KKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 K+ +M ALE A+ R N P VGAV V N KII ++ AHAE+ AI Sbjct: 16 KEDAEYMKMALELAKKGIGRVNPNPLVGAVIVKNGKIIGEGYHKMFGE----AHAEVHAI 71 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 +YVTLEPC CA I A I+R G+ +P G Sbjct: 72 ENAGEETKN-----ATIYVTLEPCSHYGKTPPCAEKIIKAGIKRCVIGSGDPNPEVAGKG 126 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + + E+ + ++ ++ Q FFK Sbjct: 127 IEMLK----NSGIEVTENVLKKECDELNQVFFK 155 >gi|325295467|ref|YP_004281981.1| riboflavin biosynthesis protein RibD [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065915|gb|ADY73922.1| riboflavin biosynthesis protein RibD [Desulfurobacterium thermolithotrophum DSM 11699] Length = 362 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 45/160 (28%), Positives = 64/160 (40%), Gaps = 25/160 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + FM A+ EA A R VGAV V + K+I+ + L HAE +A Sbjct: 1 MTQDEKFMKLAISEAYKAKGRTLPNPAVGAVIVKDGKVIATGYHERAGL----PHAESVA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I LYVTLEPC C+ I A I+R+ G +P Sbjct: 57 ISKAGEKA-----KGATLYVTLEPCNHYGKTPPCSEKIIKAGIKRVVVGIRDPNPVARGG 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + + E+ G+ E+ ++I DF KE+R Sbjct: 112 VEKLK-----NAGIEVKVGVLEKECFELIDDFIVNLKEKR 146 >gi|255075667|ref|XP_002501508.1| cytidine/deoxycytidylate deaminase family protein [Micromonas sp. RCC299] gi|226516772|gb|ACO62766.1| cytidine/deoxycytidylate deaminase family protein [Micromonas sp. RCC299] Length = 164 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 5/126 (3%) Query: 21 RNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLY 77 +E+PVGAV V + K++S N D TAHAE+ +R G ++L L + LY Sbjct: 14 NDEVPVGAVLVHTASGKVLSSHHNTVLAQDDPTAHAEMKCVRDGAKVLGGWRYLRDATLY 73 Query: 78 VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL--ATCHHSPEIYPGISEQ 135 VTLEPC MCA A+ AR+ + +GA N G + E+ + E Sbjct: 74 VTLEPCPMCAGAVLNARLGAVVWGAPNKLIGADGSWISLMGDGGDGATPGLEVRRRVLET 133 Query: 136 RSRQII 141 ++ Sbjct: 134 ECASLM 139 >gi|254458782|ref|ZP_05072206.1| cytosine deaminase [Campylobacterales bacterium GD 1] gi|207084548|gb|EDZ61836.1| cytosine deaminase [Campylobacterales bacterium GD 1] Length = 145 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 10/143 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 ++F+ A++EA+ IP+G+V V++ KI+ R NR + HAE+ + R Sbjct: 2 DIFLEEAIKEAKKGLSEGGIPIGSVLVIDGKIVGRGHNRRVQNSSAILHAEMDCLENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L +Y TL PC MC+ AI L I+R+ G + G E Sbjct: 62 -LKAIDYKRATIYSTLSPCDMCSGAILLYGIKRVIIGENKTFKGPEEYVKS--------R 112 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 E+ + + +++ F K Sbjct: 113 GIEVKV-VDNKECCNLMESFIKA 134 >gi|146295833|ref|YP_001179604.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409409|gb|ABP66413.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 371 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 20/156 (12%) Query: 1 MK--KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 MK + +M ALE A+ A + VG+V V N II + ++ K HAE+ Sbjct: 1 MKCLSHSYYMHIALELAKKASPLVLPNPRVGSVIVKNGTIIGKGYHQKYGEK----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 LAI + L +YV+LEPC C AI + I+++ +P Sbjct: 57 LAIEDAIKNGHS--LKNSTMYVSLEPCCHFGKQPPCTDAIIKSGIKKVVVATKDPNPLVN 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G Q H ++ GI E+ + + ++FFK Sbjct: 115 GKGIQILKQ----HGIKVVEGILEKEAESVNKEFFK 146 >gi|330955311|gb|EGH55571.1| cytosine deaminase [Pseudomonas syringae Cit 7] Length = 145 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A +EAQ IP+G+V V KII R NR + T H E+ A+ R Sbjct: 2 DAFMQAAFDEAQLGLKEGGIPIGSVIVHGGKIIGRGHNRRVQEGSATKHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + LY TL PC MC+ AI L IR++ G + G Sbjct: 62 QPAS-VYRNSVLYTTLSPCAMCSGAILLYGIRKVIIGENESFMGE----EDLLRSRGV-- 114 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 ++ + + ++Q F + Sbjct: 115 QIDV---LDNHDCKHMMQGFIASK 135 >gi|253743085|gb|EES99615.1| Cytosine deaminase, putative [Giardia intestinalis ATCC 50581] Length = 163 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 4/142 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M EEA A E+PVG V +I++ N ++ HAE++A+ ++ Sbjct: 1 MEECFEEANLALAEREVPVGCAIVDGSGRILATGRNATNRTRNSMCHAEMVAL---AQVP 57 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 L LYVT+EPC MCAAA+S+ + + Y A N K GG + + Sbjct: 58 LDADLTGCVLYVTIEPCIMCAAALSIVGLTNVVYFARNDKFGGCGSVLDVNNHIESPWTK 117 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 + +R+ ++Q+FF+ + Sbjct: 118 LDAKYMPNERAVHLLQEFFERK 139 >gi|50290647|ref|XP_447756.1| hypothetical protein [Candida glabrata CBS 138] gi|49527067|emb|CAG60703.1| unnamed protein product [Candida glabrata] Length = 259 Score = 131 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 18/163 (11%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILA 58 M K + AL+ A+ A E PV V V + +++ N + TAHAE +A Sbjct: 1 MDKYLKHIDSALKLARYALDHGETPVACVFVHEKSDSVVAYGLNDTNDSLSGTAHAEFVA 60 Query: 59 IRM---GCRILS------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 +RM + +++ E+ YVT+EPC MCA+A+ I ++ +G N + GG Sbjct: 61 MRMLRDAVQAQGYASVQLKQLFKEIVCYVTVEPCIMCASALKQMGIHKIVFGCGNDRFGG 120 Query: 110 IENGTQFYTLATC-------HHSPEIYPGISEQRSRQIIQDFF 145 ++ + + + PGI + + +++ F+ Sbjct: 121 NGTVLSIHSDKSTTVAGSTEYDRTILVPGIRRREAIMLLRYFY 163 >gi|6322425|ref|NP_012499.1| Tad2p [Saccharomyces cerevisiae S288c] gi|1352970|sp|P47058|TAD2_YEAST RecName: Full=tRNA-specific adenosine deaminase subunit TAD2; AltName: Full=tRNA-specific adenosine-34 deaminase subunit TAD2 gi|1008159|emb|CAA89326.1| unnamed protein product [Saccharomyces cerevisiae] gi|6434057|emb|CAB60629.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2 [Saccharomyces cerevisiae] gi|51013795|gb|AAT93191.1| YJL035C [Saccharomyces cerevisiae] gi|151945050|gb|EDN63301.1| tRNA-specific adenosine deaminase subunit [Saccharomyces cerevisiae YJM789] gi|285812866|tpg|DAA08764.1| TPA: Tad2p [Saccharomyces cerevisiae S288c] Length = 250 Score = 131 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 13/156 (8%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR 60 + M A+ A+ A +E PV + V ++++ N + AHAE + I Sbjct: 2 QHIKHMRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGID 61 Query: 61 MGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 +L ++ ++ LYVT+EPC MCA+A+ I ++ +G N + GG Sbjct: 62 QIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQLDIGKVVFGCGNERFGGNGTVLSV 121 Query: 117 YTL-----ATCHHS--PEIYPGISEQRSRQIIQDFF 145 + + E PGI + + +++ F+ Sbjct: 122 NHDTCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 157 >gi|332977120|gb|EGK13924.1| guanine deaminase [Desmospora sp. 8437] Length = 153 Score = 131 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 2/99 (2%) Query: 1 MKKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M + N +M A+E A +N P GA+ V + KI+ + N+ D T HAE+ AI Sbjct: 1 MDR-NHWMQTAIELAYENTRREKGRPFGAIIVKDGKIVGKGVNQILATHDPTMHAELEAI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 R R L+ L + +LY + +PC MC AAI A I R+ Sbjct: 60 REASRTLATSDLSDCELYASGKPCPMCLAAIYWANIHRV 98 >gi|330813628|ref|YP_004357867.1| tRNA-specific adenosine-34 deaminase [Candidatus Pelagibacter sp. IMCC9063] gi|327486723|gb|AEA81128.1| tRNA-specific adenosine-34 deaminase [Candidatus Pelagibacter sp. IMCC9063] Length = 129 Score = 131 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 48/128 (37%), Positives = 76/128 (59%), Gaps = 2/128 (1%) Query: 24 IPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 +PV A+ V + KII+RA N + KD AHAEIL IR + L+++ L +D+Y +LE Sbjct: 1 MPVSAIIVDPKSKKIIARAHNLSIRNKDPLAHAEILVIRKALKFLNKKRLDGMDIYCSLE 60 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC +AI+ +++R +Y+ A + GG+ NG + + Y G E + +I+ Sbjct: 61 PCVMCTSAIAFSQLRNIYFCAEDKASGGLINGPKLGFSKYLKYKFSFYYGFEENKFSKIL 120 Query: 142 QDFFKERR 149 DFFK++R Sbjct: 121 VDFFKQKR 128 >gi|94263921|ref|ZP_01287724.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta proteobacterium MLMS-1] gi|94264246|ref|ZP_01288041.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta proteobacterium MLMS-1] gi|93455357|gb|EAT05561.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta proteobacterium MLMS-1] gi|93455666|gb|EAT05845.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta proteobacterium MLMS-1] Length = 184 Score = 131 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 47/163 (28%), Positives = 68/163 (41%), Gaps = 21/163 (12%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR-------NRELKDVTA-- 52 +M AL+EA+ A E PVGA+ ++++ + D TA Sbjct: 3 TTDEKWMGMALDEARGALAAGEFPVGAIIAHQGQMVASGRRQHSRGAAGPVAAPDTTATE 62 Query: 53 ------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 HAE+LA+R + LY TLEPC MC AA+ L +RR+ Y + Sbjct: 63 VANELDHAEMLALRQLLSRHPTADRRGLTLYATLEPCLMCYAALLLNGVRRIVYAYEDAM 122 Query: 107 GGGIENGTQFYTLATCHHS----PEIYPGISEQRSRQIIQDFF 145 GGG G LA + EI P + + S + + FF Sbjct: 123 GGG--TGLPLAELAPLYRQMAPAVEIIPHLRRRESLALFKQFF 163 >gi|268680105|ref|YP_003304536.1| cytosine deaminase [Sulfurospirillum deleyianum DSM 6946] gi|268618136|gb|ACZ12501.1| Cytosine deaminase [Sulfurospirillum deleyianum DSM 6946] Length = 146 Score = 131 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 10/143 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ A+EEAQ IP+G+V V++ KI+ R N+ + HAE+ + R Sbjct: 3 DKFLEAAIEEAQKGLDEGGIPIGSVLVIDGKIVGRGHNQRVQKGSAILHAEMDCLENAGR 62 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 LS LY TL PC MC+ AI L I +L G + G Sbjct: 63 -LSAADYRNATLYSTLSPCDMCSGAILLYGIPKLVIGENQTFRGPEAYVKSRGVD----- 116 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 E+ +++ + R++++ F ++ Sbjct: 117 -VEV---LNDSKCRELMEAFIEK 135 >gi|15806226|ref|NP_294931.1| cell cycle protein MesJ /cytosine deaminase-like protein [Deinococcus radiodurans R1] gi|84039866|gb|AAF10777.2|AE001969_6 cell cycle protein MesJ, putative/cytosine deaminase-related protein [Deinococcus radiodurans R1] Length = 600 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 2/128 (1%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV + + +I+ R N +RE D+T HAE+ A+R L L + L VTLE Sbjct: 441 EVPVGAVVLNADGEIVGRGRNTSREDGDMTCHAELAALREAAAGLGTPYLSDCTLVVTLE 500 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC A ARI + YGA+NPK G + + P + G+ + +++ Sbjct: 501 PCPMCLGAALEARIGHIVYGAANPKAGALGGVSDLLADHW-GWRPTVQGGVRAGEAARLL 559 Query: 142 QDFFKERR 149 ++ F E R Sbjct: 560 REVFGEVR 567 >gi|226330044|ref|ZP_03805562.1| hypothetical protein PROPEN_03957 [Proteus penneri ATCC 35198] gi|225200839|gb|EEG83193.1| hypothetical protein PROPEN_03957 [Proteus penneri ATCC 35198] Length = 324 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 33/99 (33%), Positives = 55/99 (55%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + N F+ A+ A + P GAV V N ++I+ A N+ D TAHAE+LA+R Sbjct: 205 IMSDNQFIQQAISLAMDNVKVGGRPFGAVIVNNGQVIASAVNQIVTTNDPTAHAELLALR 264 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 ++L + L + +Y + +PC MC AA+ +A I +++ Sbjct: 265 EAGKVLGRTKLDDCIVYASGQPCPMCLAAMRMAGISKIF 303 >gi|117921416|ref|YP_870608.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. ANA-3] gi|117613748|gb|ABK49202.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. ANA-3] Length = 145 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ A++EA+ IP+G+V V++ +I++R N+ + HAE+ + R Sbjct: 2 DEFLQAAIDEAKQGLAEGGIPIGSVLVIDGEIVARGHNKRVQQGSAVLHAEMDCLENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + + + LY TL PC MC+ AI L I ++ G + G + Y + Sbjct: 62 LTAADY-QKATLYSTLSPCDMCSGAILLYGIPKVVVGENVTFQG-----PEAYVQSR--- 112 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 E+ + +Q++ DF + Sbjct: 113 GVEVTV-VDNHECKQLMHDFIAAK 135 >gi|120599757|ref|YP_964331.1| cytosine deaminase [Shewanella sp. W3-18-1] gi|120559850|gb|ABM25777.1| Cytosine deaminase [Shewanella sp. W3-18-1] Length = 145 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 10/143 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ A++EA+ IP+G+V V++ I++R N+ + HAE+ + R Sbjct: 2 DEFLQAAIDEAKQGLAEGGIPIGSVLVIDGNIVARGHNKRVQQGSAVLHAEMDCLENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + + LY TL PC MC+ AI L I ++ G + G + Y + Sbjct: 62 LSAADYQKG-TLYSTLSPCDMCSGAILLYGIPKVVVGENITFQG-----PEAYVQSR--- 112 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 ++ + +Q++QDF Sbjct: 113 GVDVTV-VDNPECKQLMQDFIAN 134 >gi|53804620|ref|YP_113769.1| cytosine deaminase [Methylococcus capsulatus str. Bath] gi|53758381|gb|AAU92672.1| cytosine deaminase [Methylococcus capsulatus str. Bath] Length = 145 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 12/145 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 ++++ A+ EA+ IP+G+V V++ +I+ R NR + HAE+ + R Sbjct: 2 DIYLQAAIAEARKGLEEGGIPIGSVLVIDGEIVGRGRNRRVQKGSAILHAEMDCLENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + E LY TL PC MC+ AI L I R+ F+ T Sbjct: 62 LSAAEY-RRATLYSTLSPCDMCSGAILLYGIPRVV----------AGENRTFHGPETYLR 110 Query: 125 SPEIYPGISEQ-RSRQIIQDFFKER 148 S + + + +++DF Sbjct: 111 SRNVELLVLDDPECAALMKDFIAAH 135 >gi|300114455|ref|YP_003761030.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii C-113] gi|299540392|gb|ADJ28709.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii C-113] Length = 187 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 1/103 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +M A+E ++ A + P G+V +I+ NR+ +D +AHAEI AIR Sbjct: 34 ERATQWMRRAIELSRKAMELGDGFPFGSVIAKEGEIVGEGWNRSWVNRDPSAHAEIEAIR 93 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 C+ L L D+Y + +PC MC AAI A R+++G S Sbjct: 94 DACKRLDTLSLEGCDVYASAQPCPMCIAAIYWAGANRIFFGNS 136 >gi|262276797|ref|ZP_06054590.1| tRNA-specific adenosine deaminase [alpha proteobacterium HIMB114] gi|262223900|gb|EEY74359.1| tRNA-specific adenosine deaminase [alpha proteobacterium HIMB114] Length = 158 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 41/133 (30%), Positives = 74/133 (55%), Gaps = 2/133 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 N +++ A + E+P+ A+ NN+I+S++ N+N + + +HAEI++I Sbjct: 12 NYIFDILYQQSIKAQKKKEVPISALIFDPKNNRIVSKSHNQNIQDYNPCSHAEIISIIKA 71 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C L++ L +DLY +LEPC MC++ I ++IRR+Y+ + K G + N + Sbjct: 72 CNKLNKNRLDGMDLYCSLEPCLMCSSVIFQSKIRRVYFATDDKKNGALINNYKLGLKKNL 131 Query: 123 HHSPEIYPGISEQ 135 +H +IY G E+ Sbjct: 132 NHRIDIYYGFQEE 144 >gi|61216750|sp|Q9RV23|TILS_DEIRA RecName: Full=tRNA(Ile)-lysidine synthase; AltName: Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName: Full=tRNA(Ile)-lysidine synthetase Length = 582 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 2/128 (1%) Query: 23 EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E+PVGAV + + +I+ R N +RE D+T HAE+ A+R L L + L VTLE Sbjct: 423 EVPVGAVVLNADGEIVGRGRNTSREDGDMTCHAELAALREAAAGLGTPYLSDCTLVVTLE 482 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 PC MC A ARI + YGA+NPK G + + P + G+ + +++ Sbjct: 483 PCPMCLGAALEARIGHIVYGAANPKAGALGGVSDLLADHW-GWRPTVQGGVRAGEAARLL 541 Query: 142 QDFFKERR 149 ++ F E R Sbjct: 542 REVFGEVR 549 >gi|148555831|ref|YP_001263413.1| CMP/dCMP deaminase, zinc-binding [Sphingomonas wittichii RW1] gi|148501021|gb|ABQ69275.1| CMP/dCMP deaminase, zinc-binding [Sphingomonas wittichii RW1] Length = 163 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 50/105 (47%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 F+ A+E A++ + P GAV V + I++ N D TAHAE+ AIR Sbjct: 6 DEQRFLRAAIELARDNVAQGGRPFGAVVVKDGAIVAVGVNEILATNDPTAHAELGAIRAA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 R L L +Y + PC MC AA+ +A I + Y SN G Sbjct: 66 GRRLGSPDLSGCTVYASGHPCPMCMAAMRMAGIGAVAYAYSNEDG 110 >gi|91215299|ref|ZP_01252271.1| hypothetical protein P700755_13417 [Psychroflexus torquis ATCC 700755] gi|91186904|gb|EAS73275.1| hypothetical protein P700755_13417 [Psychroflexus torquis ATCC 700755] Length = 149 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 42/145 (28%), Positives = 59/145 (40%), Gaps = 6/145 (4%) Query: 1 MKK--GNVFMSCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MKK FM A+ A+ GAV V II+ N+ D T HAE+ Sbjct: 1 MKKELHEKFMLKAINWAKKGKDTDGGGAFGAVIVKEGHIIAEGHNQVGSKTDCTQHAELA 60 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--NPKGGGIENGTQ 115 ++ CR L + L LY + EPC MC A A + +++YGAS + K G Sbjct: 61 MVQEACRKLKSKSLKGCVLYTSCEPCLMCLGATRWADLDQVFYGASADDAKEAGYIYSDL 120 Query: 116 FYTLATCHHSPEIY-PGISEQRSRQ 139 FY T + E + + Sbjct: 121 FYKSNTENRHLEFKLKQMLRDEAIA 145 >gi|218506804|ref|ZP_03504682.1| cytosine deaminase protein [Rhizobium etli Brasil 5] Length = 98 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 59/95 (62%), Positives = 73/95 (76%) Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 EI AIR+ C L QE L DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG Sbjct: 1 EIAAIRLACEALGQERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGV 60 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +FY TCHH PE+Y G++E +S +I++ FF ++R Sbjct: 61 RFYAQPTCHHVPEVYSGLNEVQSAEILRTFFSQKR 95 >gi|289208092|ref|YP_003460158.1| CMP/dCMP deaminase zinc-binding protein [Thioalkalivibrio sp. K90mix] gi|288943723|gb|ADC71422.1| CMP/dCMP deaminase zinc-binding protein [Thioalkalivibrio sp. K90mix] Length = 146 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 12/145 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N F+ AL+EA+ IP+G+V +I+ R NR + HAE+ A+ R Sbjct: 2 NPFLEAALDEARTGWDEGGIPIGSVIEHGGRIVGRGHNRRVQSGSAILHAEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + E LY TL PC MC+ AI L I R+ G N G E+ + H Sbjct: 62 QPAS-VYRECTLYTTLSPCAMCSGAIVLYGIPRVVVG-ENATFMGEEDWLR-------SH 112 Query: 125 SPEIYPGISEQ-RSRQIIQDFFKER 148 ++ + + ++++ F + Sbjct: 113 GVQV--DVLQDAACQELMTAFIERH 135 >gi|110679616|ref|YP_682623.1| cytosine deaminase [Roseobacter denitrificans OCh 114] gi|109455732|gb|ABG31937.1| cytosine deaminase [Roseobacter denitrificans OCh 114] Length = 147 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 15/150 (10%) Query: 1 MKK-GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M + A +EA+ P+G+V +++++ N+ + D AH E+ A+ Sbjct: 1 MNDVDIRMLRIAYDEAKAGFDEGGCPIGSVLARGGEVVAQGRNQRVQKGDPIAHGEMDAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R R Q+ + LY +L PC MC I I R+ G N GG E F Sbjct: 61 RKAGR---QKSYRDTTLYTSLSPCMMCTGTIIQFGIPRVVIG-ENRNFGGNE---DFLRS 113 Query: 120 ATCHHSPEIYPGISEQ-RSRQIIQDFFKER 148 E+ +++ ++Q F +E+ Sbjct: 114 KG----VEVI--VADDPDCIALMQRFIREK 137 >gi|30021149|ref|NP_832780.1| cytosine deaminase [Bacillus cereus ATCC 14579] gi|29896702|gb|AAP09981.1| Cytosine deaminase [Bacillus cereus ATCC 14579] Length = 169 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 7/150 (4%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ F+ ALEEA+ A N PVGAV V NN +I+R NR KD+TAHAE+ AIR Sbjct: 4 ERDRYFLQMALEEAEKALKENTYPVGAVIVDGNNNVIARGRNRVHPEKDITAHAELDAIR 63 Query: 61 MGCRILSQEILPE--VDLYVTLEPCTMCAAAISLARIRRLYYGASNP-KGGGIENGTQFY 117 + + +Y TLEPC MC I A+I+R+ + ++ GG + Sbjct: 64 NAGEAMFDAKIKNERFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFGGYKKIKNAL 123 Query: 118 TLATCHHSPEIYPGISEQ---RSRQIIQDF 144 + ++ E R R++++ + Sbjct: 124 VFEGKFNKIDMVEEPFEDLKTRQRELMRQW 153 >gi|223938524|ref|ZP_03630416.1| Cytosine deaminase [bacterium Ellin514] gi|223892786|gb|EEF59255.1| Cytosine deaminase [bacterium Ellin514] Length = 145 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ A+EEA+ IP+G+V V KII R N+ + V HAE+ + R Sbjct: 2 DTFLQAAIEEAKKGLAAGGIPIGSVLVYEGKIIGRGHNQRVQHGSVIHHAEMNCLENSGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + + LY TL PC MC+ A L +I + G + G + Sbjct: 62 QKAS-VYQKCTLYSTLSPCPMCSGAALLYKIPHVIVGENVTFQGPEAYV------RSQGV 114 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 EI + + ++++DF R Sbjct: 115 KVEI---LQNEECIKLMRDFIAAR 135 >gi|25027973|ref|NP_738027.1| hypothetical protein CE1417 [Corynebacterium efficiens YS-314] gi|23493256|dbj|BAC18227.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 157 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 6/151 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M F+ A+E ++ P GAV ++II+ A N KD T HAEI+AI Sbjct: 1 MTMNPNFLHRAVELSRRGMEAGQGGPFGAVIARGDRIIAEAYNTVLATKDPTNHAEIVAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R R+L L +LYV +PC MCA A+ AR+ R+Y+ + + I Sbjct: 61 RSAARVLGTVDLTGCELYVNAQPCPMCAGAVYWARLERVYFANTAAESARIGF-DDVRID 119 Query: 120 ATCHHSPEIYP----GISEQRSRQIIQDFFK 146 + +P+ + ++R+R++ D+ + Sbjct: 120 TELNRNPQDRGIPFEHVPDRRAREVFDDWLR 150 >gi|242802981|ref|XP_002484082.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500] gi|218717427|gb|EED16848.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500] Length = 148 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 14/150 (9%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M+ F+ A+EEA+ +P+GA V + KI+ R N + T H EI A+ Sbjct: 1 METDPGFI-AAVEEARQGQAEGGVPIGACLVSKDGKILGRGHNMRFQKGSATLHGEISAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R+ + +Y TL PC MC A L +++R+ G +N GG E Sbjct: 60 ENSGRLPASAY-EGATMYTTLSPCDMCTGACILYKVKRVVVGENNNFLGGEEYLKS---- 114 Query: 120 ATCHHSPEIYPGISE-QRSRQIIQDFFKER 148 E+ + + + +++ DF +E+ Sbjct: 115 ----RGIEVV--VLQNEECIKLMTDFIREK 138 >gi|116491296|ref|YP_810840.1| cytosine/adenosine deaminase [Oenococcus oeni PSU-1] gi|290890847|ref|ZP_06553913.1| hypothetical protein AWRIB429_1303 [Oenococcus oeni AWRIB429] gi|116092021|gb|ABJ57175.1| Cytosine/adenosine deaminase [Oenococcus oeni PSU-1] gi|290479498|gb|EFD88156.1| hypothetical protein AWRIB429_1303 [Oenococcus oeni AWRIB429] Length = 148 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 3/111 (2%) Query: 8 MSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+E+A P GAV V + ++I A N D TAHAEI+AIR C++ Sbjct: 1 MKLAIEQANENIVLKEGG-PFGAVIVRDQEVICAAHNMVLANLDPTAHAEIIAIRKACKV 59 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L+ L + LY + PC MC +A A I+ + YG + + I F Sbjct: 60 LATCDLSDCTLYTSAYPCPMCLSATIWANIKEVRYGNTPKEADRIGFRDDF 110 >gi|325958148|ref|YP_004289614.1| Cytosine deaminase [Methanobacterium sp. AL-21] gi|325329580|gb|ADZ08642.1| Cytosine deaminase [Methanobacterium sp. AL-21] Length = 157 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 20/145 (13%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL+EA+ + IP+GA+ V + I+ R N + HAE+ I Sbjct: 8 EDDYKFMMEALKEAKKSLESGGIPIGAILVKDGVIVGRGHNNLLQKNSTILHAEMDCIEN 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG-----IENGTQF 116 R+ ++ LY TL PC MC+ I L +I R+ G N G IE+G + Sbjct: 68 SGRLKGKDY-KRSTLYTTLSPCEMCSGTIILYKISRVVIG-ENENLKGPEKCLIESGIEL 125 Query: 117 YTLATCHHSPEIYPGISEQRSRQII 141 L ++++ Sbjct: 126 KNLDLP-------------ECKEML 137 >gi|297191556|ref|ZP_06908954.1| deaminase [Streptomyces pristinaespiralis ATCC 25486] gi|197719293|gb|EDY63201.1| deaminase [Streptomyces pristinaespiralis ATCC 25486] Length = 167 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 47/94 (50%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 +M A+ A + P GA+ V + +I++ N+ D TAH E+ AIR GC+ L Sbjct: 17 WMEEAIGLATASVENGGGPFGALIVKDGEIVAIGNNKVTSNLDPTAHGEVSAIRAGCQKL 76 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L L + EPC MC ++ AR+ R+ + Sbjct: 77 GTFSLEGCVLVTSCEPCPMCLSSALWARVDRIIF 110 >gi|288818291|ref|YP_003432639.1| riboflavin biosynthesis protein [Hydrogenobacter thermophilus TK-6] gi|288787691|dbj|BAI69438.1| riboflavin biosynthesis protein [Hydrogenobacter thermophilus TK-6] gi|308751888|gb|ADO45371.1| riboflavin biosynthesis protein RibD [Hydrogenobacter thermophilus TK-6] Length = 361 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 21/152 (13%) Query: 2 KKGNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + + FM ALE A + VG V V + KII+ + + HAE +A+ Sbjct: 4 ETDHHFMRRALELAKLRKGLTHPNPTVGCVIVKDGKIIAEGYHEKVGM----PHAEAVAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 LYVTLEPC C AI A+++R+ +P G Sbjct: 60 EKAGTQA-----EGSTLYVTLEPCTHYGRTPPCTDAIIRAKVKRVVIATLDPNPLVSGRG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 Q A ++ G+ E +R++ +DFF Sbjct: 115 VQKLRDAG----IDVCVGVLEDEARELNEDFF 142 >gi|297622621|ref|YP_003704055.1| CMP/dCMP deaminase zinc-binding protein [Truepera radiovictrix DSM 17093] gi|297163801|gb|ADI13512.1| CMP/dCMP deaminase zinc-binding protein [Truepera radiovictrix DSM 17093] Length = 153 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 12/147 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A E A R + GAV V +++ A N + +D +AHAE+ IR CR Sbjct: 13 EAWMRLAAEVA----ERGQTMFGAVLVRGGALLAEAANTVAKDRDPSAHAELSLIRRACR 68 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE------NGTQFYT 118 L L LY T+EPC MCAAA + + + +GAS + + + + + Sbjct: 69 ELVTTDLDGCTLYTTVEPCPMCAAACVWSGVSGVVFGASIAEVAELGVPQIALSCEELFG 128 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145 H+P + G+ +R ++ Q F+ Sbjct: 129 --RVQHAPTLRGGVERERCLELCQRFW 153 >gi|163735385|ref|ZP_02142819.1| cytosine deaminase [Roseobacter litoralis Och 149] gi|161391394|gb|EDQ15729.1| cytosine deaminase [Roseobacter litoralis Och 149] Length = 150 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 15/150 (10%) Query: 1 MKK-GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M + A +EA+ P+G+V +++++ N+ + D AH E+ A+ Sbjct: 4 MNDADIRLLRIAYDEAKAGFDEGGCPIGSVLARGGEVVAQGRNQRVQKGDPIAHGEMDAL 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R R Q+ + LY +L PC MC I I R+ G N GG E F Sbjct: 64 RKAGR---QKSYRDTTLYTSLSPCMMCTGTIIQFGIPRVVIG-ENKNFGGNE---DFLRS 116 Query: 120 ATCHHSPEIYPGISEQ-RSRQIIQDFFKER 148 E+ +++ ++Q F E+ Sbjct: 117 KG----VEVI--VADDPDCIDLMQRFITEK 140 >gi|116794256|gb|ABK27067.1| unknown [Picea sitchensis] gi|116794306|gb|ABK27088.1| unknown [Picea sitchensis] Length = 186 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 1/102 (0%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + F+S A+EEA + P GA+ V N+++I+ N + D TAHAE+ AIR Sbjct: 29 DRDLKFLSKAVEEAYSGVNCGHGGPFGAIVVRNDEVIASCHNMVLKNMDPTAHAEVTAIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 C L + L + +++ + EPC MC AI L+RI+RL YGA Sbjct: 89 EACNKLGRIELSDCEIFASCEPCPMCFGAIHLSRIKRLLYGA 130 >gi|323454906|gb|EGB10775.1| hypothetical protein AURANDRAFT_21935 [Aureococcus anophagefferens] Length = 152 Score = 130 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 49/144 (34%), Positives = 71/144 (49%), Gaps = 2/144 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--RELKDVTAHAEILAIRMGCRI 65 M AL+EA+ AA E+PVGAV V + A N +D +AHAE+LA+R Sbjct: 1 MGLALDEARRAAAAGEVPVGAVVVDDATGAVVAAAGNAIEATQDASAHAELLALRRAAAA 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L LY TLEPC +C +A R+ R+ YGA + + G E+ L H+ Sbjct: 61 RGNWRLANCTLYSTLEPCVLCMSACYAFRVGRVVYGAPDHRLGAAESWLNMAELGHPFHA 120 Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149 + G+ E + ++ FF+ RR Sbjct: 121 LAVDGGVREPEAADAMRSFFRARR 144 >gi|288934196|ref|YP_003438255.1| CMP/dCMP deaminase zinc-binding protein [Klebsiella variicola At-22] gi|290508399|ref|ZP_06547770.1| cytidine/deoxycytidylate deaminase [Klebsiella sp. 1_1_55] gi|288888925|gb|ADC57243.1| CMP/dCMP deaminase zinc-binding protein [Klebsiella variicola At-22] gi|289777793|gb|EFD85790.1| cytidine/deoxycytidylate deaminase [Klebsiella sp. 1_1_55] Length = 152 Score = 130 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 56/107 (52%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + ++ AL A+ P GAV V +++I++ A N D TAHAE+ A+R Sbjct: 1 MSADDRYLQRALALAKQNIADGGRPFGAVLVRHDEIVAEAVNTFHLNGDPTAHAELNAVR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 L E+L E +Y + +PC MC +A+ L +R +++ SN G Sbjct: 61 ELAARLGSEVLRECVIYASGQPCPMCLSALYLTGVREVFFANSNQDG 107 >gi|192291626|ref|YP_001992231.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris TIE-1] gi|192285375|gb|ACF01756.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris TIE-1] Length = 214 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 2/104 (1%) Query: 2 KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ +M+ A+E + A + GAV V + +++S GN D +AHAE+ AI Sbjct: 59 EQDRRYMTQAIELMRKAGVVEKTGGAFGAVIVRDGEVLSATGNSVLRDNDPSAHAEVNAI 118 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 R C+ + L +Y + E C MC A AR+ R++Y AS Sbjct: 119 RAACKKVGAPNLRGATMYTSCECCPMCYATAYWARLDRIFYAAS 162 >gi|256376193|ref|YP_003099853.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827] gi|255920496|gb|ACU36007.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827] Length = 158 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 50/113 (44%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 ++ +++ A P GA+ +++++ NR D TAHAE++AIR CR L Sbjct: 9 WLRRSVDLAVRNVADGGGPFGALVARGDEVVATGANRVTADLDPTAHAEVVAIRAACRAL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L L + EPC +C +A AR+ R+ Y A + + Sbjct: 69 GDFSLAGCVLVSSCEPCPLCLSAALWARVERVVYAADRHDAAAVGFDDGVFHD 121 >gi|226948555|ref|YP_002803646.1| guanine deaminase [Clostridium botulinum A2 str. Kyoto] gi|226842608|gb|ACO85274.1| guanine deaminase [Clostridium botulinum A2 str. Kyoto] Length = 157 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 2/113 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M K + M ++ +E P G+ V + ++I+ A N D TAH E+ I Sbjct: 1 MNKNEI-MDLCVKSCMEGMKNHEGGPFGSAIVKDGEVIAVAHNTVVGDNDPTAHGEVNVI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 R C+ L+ L +LY T EPC MC +AI A I ++YYG + I Sbjct: 60 RKACKKLNTFDLSGCELYTTSEPCPMCMSAIIWANISKVYYGCTVEDARDIGF 112 >gi|241950789|ref|XP_002418117.1| tRNA-specific adenosine deaminase subunit, putative; tRNA-specific adenosine-34 deaminase subunit, putative [Candida dubliniensis CD36] gi|223641456|emb|CAX43417.1| tRNA-specific adenosine deaminase subunit, putative [Candida dubliniensis CD36] Length = 280 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 3/147 (2%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ +L A L NE PV + V ++KIIS N + T HAE +A++ Sbjct: 8 HFQYMATSLFVGYKALLNNETPVSCIVVDSKSDKIISIGYNYTNHSLNGTQHAEFIALQR 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 ++ LYVT+EPC MCA+ + I ++ +G N + GG ++ T Sbjct: 68 FTEQKPSIGYNDLILYVTVEPCIMCASYLRQLGIGKVIFGCGNDRFGGNGTILPIHSDTT 127 Query: 122 C-HHSPEIYPGISEQRSRQIIQDFFKE 147 + + GI Q++++F+ + Sbjct: 128 LPNATYSSIGGICRTEGIQLLRNFYIQ 154 >gi|292491509|ref|YP_003526948.1| guanine deaminase [Nitrosococcus halophilus Nc4] gi|291580104|gb|ADE14561.1| Guanine deaminase [Nitrosococcus halophilus Nc4] Length = 155 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 39/107 (36%), Positives = 53/107 (49%), Gaps = 1/107 (0%) Query: 7 FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ A+ A + P GA+ V + +I++ A N E D TAHAEI AIRM C+ Sbjct: 5 FMAEAIRLASQGMDDDLGGPFGALIVRDGEILAHACNGVVEACDPTAHAEIQAIRMACKH 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++ L LY + EPC MC A A + +YY AS I Sbjct: 65 INHFHLEGCVLYCSCEPCPMCLGAAYWAHLDGIYYAASREDAANIGF 111 >gi|237755714|ref|ZP_04584322.1| riboflavin biosynthesis protein RibD [Sulfurihydrogenibium yellowstonense SS-5] gi|237692135|gb|EEP61135.1| riboflavin biosynthesis protein RibD [Sulfurihydrogenibium yellowstonense SS-5] Length = 371 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 43/160 (26%), Positives = 63/160 (39%), Gaps = 21/160 (13%) Query: 1 MKKGNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +K +M AL+ A + VGAV V + KII + + K HAE A Sbjct: 4 IKDLESYMKIALDLAKIRKGLTHPNPTVGAVIVKDGKIIGKGYH----TKAGMPHAEREA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I+ L ++VTLEPC C +AI I + GA + Sbjct: 60 IKDA--KEKGHDLKGSTMFVTLEPCCHYGRTPPCTSAIIEEGISEVVIGALDQNPIVKGQ 117 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 G H ++ G+ E+ +I +DFF KE+R Sbjct: 118 GVNILKS----HGIKVITGVLEKECEKINEDFFTYIKEKR 153 >gi|227538659|ref|ZP_03968708.1| possible cytosine deaminase [Sphingobacterium spiritivorum ATCC 33300] gi|227241578|gb|EEI91593.1| possible cytosine deaminase [Sphingobacterium spiritivorum ATCC 33300] Length = 94 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 6/99 (6%) Query: 51 TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 TAHAE+ A L + L + LYVT+EPC MCA A ++ R+ YGA + K G Sbjct: 2 TAHAEMQAFTAASSYLGGKYLKDCTLYVTVEPCVMCAGASYWTQVSRIVYGAPDEKRGAS 61 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G H EI G+ ++ ++I FF+++R Sbjct: 62 RYG------KLFHPKTEIISGVLQEECAELITSFFRQKR 94 >gi|170761087|ref|YP_001786677.1| guanine deaminase [Clostridium botulinum A3 str. Loch Maree] gi|169408076|gb|ACA56487.1| guanine deaminase [Clostridium botulinum A3 str. Loch Maree] Length = 157 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 2/113 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M K + M ++ +E P G+ V + ++I+ A N D TAH E+ I Sbjct: 1 MDKNEI-MDLCVKSCMEGMKNHEGGPFGSAIVKDGEVIAVAHNTVIGDNDPTAHGEVNVI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 R C+ L+ L +LY T EPC MC +AI A I ++YYG + I Sbjct: 60 RKACKKLNTFDLSGCELYTTSEPCPMCMSAIIWANISKVYYGCTVEDARDIGF 112 >gi|17555996|ref|NP_499418.1| hypothetical protein Y48A6B.7 [Caenorhabditis elegans] gi|3881060|emb|CAA19531.1| C. elegans protein Y48A6B.7, confirmed by transcript evidence [Caenorhabditis elegans] Length = 168 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 2/118 (1%) Query: 4 GNVFMSCALEEAQNAALRNEI-PVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 M+ A+ EA + P GAV V N K++++ N KD T HAE+ AI+ Sbjct: 14 HAEHMAEAVAEACRGVECGDGGPFGAVVVDSNGKVVAKGHNMVLVTKDPTMHAEMTAIKN 73 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 C+ L L LY + PC MC AR +YYGA+ + I + + Sbjct: 74 ACKALGTFDLSGHILYTSCYPCPMCMGGCLWARFDAIYYGATAQQAAEIGFDDKAFHD 131 >gi|146341264|ref|YP_001206312.1| putative cytidine/deoxycytidylate deaminase [Bradyrhizobium sp. ORS278] gi|146194070|emb|CAL78088.1| putative cytidine/deoxycytidylate deaminase [Bradyrhizobium sp. ORS278] Length = 165 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 42/146 (28%), Positives = 59/146 (40%), Gaps = 6/146 (4%) Query: 1 MKKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +K FM A++ A Q+ A P+G V VL + I++ N D TAHAEI AI Sbjct: 4 LKTDEHFMQEAIKIATQDGADPALSPIGCVIVLGSDIVAAERNHVAAKHDATAHAEIEAI 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-----GGGIENGT 114 R R L LY TL+PC MC A +++ R+ YGA T Sbjct: 64 RAAGRGFDDGELRGATLYTTLQPCGMCTMASIWSKVGRIVYGAGRDDVHQMYFEARHVDT 123 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQI 140 + I G+ ++ Sbjct: 124 LKFVENAYRDDITIEGGVLRDACSKL 149 >gi|322805608|emb|CBZ03173.1| tRNA-specific adenosine-34 deaminase [Clostridium botulinum H04402 065] Length = 157 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 2/113 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M K + M ++ +E P G+ V + ++I+ A N D TAH E+ I Sbjct: 1 MDKNEI-MDLCVKSCMEGMKNHEGGPFGSAIVKDGEVIAVAHNTVVGDNDPTAHGEVNVI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 R C+ L+ L +LY T EPC MC +AI A I ++YYG + I Sbjct: 60 RKACKKLNTFDLSGCELYTTSEPCPMCMSAIIWANISKVYYGCTVEDARDIGF 112 >gi|82701279|ref|YP_410845.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Nitrosospira multiformis ATCC 25196] gi|82409344|gb|ABB73453.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nitrosospira multiformis ATCC 25196] Length = 147 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 33/107 (30%), Positives = 50/107 (46%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + F+ A+ A+N R P AV V+ + +S N + D T HAE+ A+R Sbjct: 1 MSQHETFLREAVRLAKNNRERGSRPFAAVLVVEGQAVSTGVNDVVQSNDPTTHAEMEAVR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 R L + L +Y + PC MC AA+ +A + +YY N Sbjct: 61 AASRKLGRPDLRGSIVYASGHPCPMCLAAMVIAGVDAVYYAFDNDDA 107 >gi|149197492|ref|ZP_01874543.1| riboflavin biosynthesis protein RibD [Lentisphaera araneosa HTCC2155] gi|149139510|gb|EDM27912.1| riboflavin biosynthesis protein RibD [Lentisphaera araneosa HTCC2155] Length = 342 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 16/151 (10%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A++ A A P VGAV V + ++I+ + K T HAE AI Sbjct: 2 HEKWMQRAIDNALKAWGHTSPNPHVGAVIVKDGEVIADGWH----KKAGTHHAEKDAITN 57 Query: 62 GCRILSQEILPEVDLYVTLEPCT------MCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 ++ L +YVTLEPC C I A I ++ YG ++ G Sbjct: 58 AKEAGREDDLYGSTIYVTLEPCCTYGRTEPCTEWIMDAGIAKVVYGCTDSNPEHAGRGFN 117 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + A EI I E+ I + FFK Sbjct: 118 YLLQAG----VEIEGPILEEECLAINRFFFK 144 >gi|154150488|ref|YP_001404106.1| cytosine deaminase [Candidatus Methanoregula boonei 6A8] gi|153999040|gb|ABS55463.1| Cytosine deaminase [Methanoregula boonei 6A8] Length = 177 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 10/137 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 + A+ EA+ IP+G+V V++ KI+ R NR + HAE+ + R Sbjct: 36 LQEAILEARKGLAEGGIPIGSVLVIDGKIVGRGHNRRVQNNSAILHAEMDCLENAGRRTP 95 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 +E L+ TL PC MC+ + L +I R+ G N G E + + + Sbjct: 96 KEY-KRATLFSTLSPCDMCSGVVLLYKIPRVVIG-ENATFKGPEEYLRSRGVKILN---- 149 Query: 128 IYPGISEQRSRQIIQDF 144 + +Q+++DF Sbjct: 150 ----LDNPECKQLMKDF 162 >gi|148379269|ref|YP_001253810.1| guanine deaminase [Clostridium botulinum A str. ATCC 3502] gi|153931455|ref|YP_001383643.1| guanine deaminase [Clostridium botulinum A str. ATCC 19397] gi|153935940|ref|YP_001387192.1| guanine deaminase [Clostridium botulinum A str. Hall] gi|148288753|emb|CAL82837.1| guanine deaminase [Clostridium botulinum A str. ATCC 3502] gi|152927499|gb|ABS32999.1| guanine deaminase [Clostridium botulinum A str. ATCC 19397] gi|152931854|gb|ABS37353.1| guanine deaminase [Clostridium botulinum A str. Hall] Length = 157 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 2/113 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M K + M ++ +E P G+ V + ++I+ A N D TAH E+ I Sbjct: 1 MDKNEI-MDLCVKSCMEGMKNHEGGPFGSAIVKDGEVIAVAHNTVIGDNDPTAHGEVNVI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 R C+ L+ L +LY T EPC MC +AI A I ++YYG + I Sbjct: 60 RKACKKLNTFDLSGCELYTTSEPCPMCMSAIIWANISKVYYGCTVEDARDIGF 112 >gi|296270519|ref|YP_003653151.1| cytosine deaminase [Thermobispora bispora DSM 43833] gi|296093306|gb|ADG89258.1| Cytosine deaminase [Thermobispora bispora DSM 43833] Length = 149 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 12/146 (8%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M A+E+A+ IP+GA V + +++ NR + H E + Sbjct: 2 SDDRYMRLAIEQARIGLSEGGIPIGAALVADGEVLGVGRNRRVQEGSAIRHGETDCLENA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L + + LY TL PC +CA A+ L I R+ G + Q Sbjct: 62 GR-LPARVYRKSTLYTTLSPCHLCAGAVLLYGIPRVVIGENRTFTASEGLLRQ------- 113 Query: 123 HHSPEIYPGISE-QRSRQIIQDFFKE 147 H E+ + + Q++++F Sbjct: 114 -HGVELV--VLDLDECVQMMREFIAA 136 >gi|237798885|ref|ZP_04587346.1| cytosine deaminase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021739|gb|EGI01796.1| cytosine deaminase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 145 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 12/145 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A EEAQ+ IP+G+V V + KII R NR + T H E+ A+ R Sbjct: 2 DAFMRAAFEEAQHGQEEGGIPIGSVIVHDGKIIGRGRNRRVQNASATLHGEMDALENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + E LY TL PC MC+ AI L IR++ G + G Sbjct: 62 QPAS-VYREAVLYTTLSPCAMCSGAILLYGIRKVIVGENQSFMGE----EDLLRSRG--- 113 Query: 125 SPEIYPGISEQ-RSRQIIQDFFKER 148 + + + + ++Q+F + Sbjct: 114 ---VQIDVLDDAACKHMMQNFINNK 135 >gi|39935973|ref|NP_948249.1| cytidine/deoxycytidylate deaminase [Rhodopseudomonas palustris CGA009] gi|39649827|emb|CAE28349.1| Cytidine/deoxycytidylate deaminase:Tat pathway signal [Rhodopseudomonas palustris CGA009] Length = 214 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 2/104 (1%) Query: 2 KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ +M+ A+E + A + GAV V + +++S GN D +AHAE+ AI Sbjct: 59 EQDRRYMTQAIELMRKAGVVEKTGGAFGAVIVRDGEVLSATGNSVLRDNDPSAHAEVNAI 118 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 R C+ + L +Y + E C MC A AR+ R++Y AS Sbjct: 119 RAACKKVGAPNLRGATMYTSCECCPMCYATAYWARLDRIFYAAS 162 >gi|297570280|ref|YP_003691624.1| Guanine deaminase [Desulfurivibrio alkaliphilus AHT2] gi|296926195|gb|ADH87005.1| Guanine deaminase [Desulfurivibrio alkaliphilus AHT2] Length = 156 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 1/111 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + F++ + A R + P A+ V +++II R NR D TAHAE+ AIR Sbjct: 2 EHEKFIAATIALAGETMRRGDGGPFAALVVRDHEIIGRGWNRVTSANDPTAHAEVEAIRA 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C + L LYV EPC MC AA A I ++YY A I Sbjct: 62 ACAQVGDFSLAGCTLYVNCEPCPMCLAAAYWAGIEQIYYAADRHDAAAIGF 112 >gi|302835481|ref|XP_002949302.1| hypothetical protein VOLCADRAFT_89616 [Volvox carteri f. nagariensis] gi|300265604|gb|EFJ49795.1| hypothetical protein VOLCADRAFT_89616 [Volvox carteri f. nagariensis] Length = 192 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 39/79 (49%), Positives = 47/79 (59%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +PVGAV V ++I++R NR L+ AHAE+L I G LS L LY TLEPC Sbjct: 58 VPVGAVLVHGDRILARGHNRVHRLRSPVAHAEMLCITAGASKLSSWRLLGATLYATLEPC 117 Query: 84 TMCAAAISLARIRRLYYGA 102 MCA AI ARI R+ YG Sbjct: 118 PMCAGAILQARIARVVYGC 136 >gi|296273637|ref|YP_003656268.1| cytosine deaminase [Arcobacter nitrofigilis DSM 7299] gi|296097811|gb|ADG93761.1| Cytosine deaminase [Arcobacter nitrofigilis DSM 7299] Length = 145 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 10/143 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ A++EA+ IP+G+V V+++KI+ R NR + HAE+ + R Sbjct: 2 DKFLQAAIDEAKKGIDEGGIPIGSVLVIDDKIVGRGHNRRVQNGSAVLHAEMDCLENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 I + + LY TL PC MC+ A+ L I + G N G E ++ + Sbjct: 62 IKASDY-KRATLYSTLSPCDMCSGAVLLYGIPNVVIG-ENKTFKGPE---EYVKSRGVNV 116 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 + Q ++ F K Sbjct: 117 KV-----MDNQECINLMGTFIKN 134 >gi|270159339|ref|ZP_06187995.1| cytosine deaminase [Legionella longbeachae D-4968] gi|289165841|ref|YP_003455979.1| Cytosine deaminase (Cytosine aminohydrolase) [Legionella longbeachae NSW150] gi|269987678|gb|EEZ93933.1| cytosine deaminase [Legionella longbeachae D-4968] gi|288859014|emb|CBJ12942.1| Cytosine deaminase (Cytosine aminohydrolase) [Legionella longbeachae NSW150] Length = 149 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 10/142 (7%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 ++ A+EEA+ + + IP+GAV V ++II R N+ + H E+ AI Sbjct: 4 SHLRYLDTAIEEARRSVAQGGIPIGAVLVYKDRIIGRGHNQRVQKGSTILHGEMDAIENA 63 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R ++ + LY TL PC MC+ AI L +I + G + G Sbjct: 64 GR-QKAKVYEQSILYTTLSPCAMCSGAILLYKIPYVVIGENQTFMGE----ETLLKSRGV 118 Query: 123 HHSPEIYPGISEQRSRQIIQDF 144 E+ + +++DF Sbjct: 119 --KLEV---LQNDECITMMRDF 135 >gi|315305704|ref|ZP_07875310.1| tRNA-specific adenosine deaminase [Listeria ivanovii FSL F6-596] gi|313625927|gb|EFR95453.1| tRNA-specific adenosine deaminase [Listeria ivanovii FSL F6-596] Length = 84 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 38/80 (47%), Positives = 48/80 (60%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM ALEEA+ A E+P+GAV VL+ KII RA N ++ HAE+LAI+ C Sbjct: 5 FFMQQALEEAEKAREIGEVPIGAVVVLDGKIIGRAHNLRETSQNAVTHAELLAIQDACNY 64 Query: 66 LSQEILPEVDLYVTLEPCTM 85 + L +LYVTLEPC M Sbjct: 65 QNSWRLSGAELYVTLEPCPM 84 >gi|293335013|ref|NP_001169897.1| hypothetical protein LOC100383791 [Zea mays] gi|224032231|gb|ACN35191.1| unknown [Zea mays] Length = 180 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%) Query: 10 CALEEAQNAAL--RNEIPVGAVAVL---NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 A++EA A P GAV V +++++S + N R+ D +AHAE+ AIR C+ Sbjct: 28 KAVDEAYRAVECDGGGYPFGAVVVHGGGDDEVVSSSHNSVRKDADPSAHAEVTAIRQACK 87 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 L + L ++Y + EPC MC I LA+I+++ YGA + Sbjct: 88 KLGKTSLAGCEIYTSCEPCPMCLGLIRLAKIKKVVYGAKSEVAAAAG 134 >gi|260943466|ref|XP_002616031.1| hypothetical protein CLUG_03273 [Clavispora lusitaniae ATCC 42720] gi|238849680|gb|EEQ39144.1| hypothetical protein CLUG_03273 [Clavispora lusitaniae ATCC 42720] Length = 296 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 15/156 (9%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILA 58 + + +M+ A A A E PV V V I++ N + T HAE +A Sbjct: 3 LTRHFQYMAVATFVAYRAFANGETPVACVFVHEPSQTILAFGCNDTNRSLNGTRHAEFMA 62 Query: 59 IRMGCRILS---------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 I + +V LYVT+EPC MCA+A+ I+++Y+GA+N + GG Sbjct: 63 IDKILQENHLLNSSPEKVAAFFSQVVLYVTVEPCVMCASALRHVGIKKVYFGAANDRFGG 122 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + + S + GI + ++++F+ Sbjct: 123 NGTVIKVQE----NDSYLSFGGIMRVEAVHLLRNFY 154 >gi|256271071|gb|EEU06172.1| Tad2p [Saccharomyces cerevisiae JAY291] Length = 250 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 66/156 (42%), Gaps = 13/156 (8%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVA--VLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M A+ A+ A +E PV + ++++ N + AHAE + I Sbjct: 2 QHVKHMRTAVRLARYALDHDETPVACIFEHTPTGQVMAYGMNDTNKSLTGVAHAEFMGID 61 Query: 61 MGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 +L ++ ++ LYVT+EPC MCA+A+ I ++ +G N + GG Sbjct: 62 QIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGGNGTVLSV 121 Query: 117 YTL-----ATCHHS--PEIYPGISEQRSRQIIQDFF 145 + + E PGI + + +++ F+ Sbjct: 122 NHDTCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 157 >gi|259506366|ref|ZP_05749268.1| guanine deaminase [Corynebacterium efficiens YS-314] gi|259166044|gb|EEW50598.1| guanine deaminase [Corynebacterium efficiens YS-314] Length = 155 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 6/145 (4%) Query: 7 FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 F+ A+E ++ P GAV ++II+ A N KD T HAEI+AIR R+ Sbjct: 5 FLHRAVELSRRGMEAGQGGPFGAVIARGDRIIAEAYNTVLATKDPTNHAEIVAIRSAARV 64 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L L +LYV +PC MCA A+ AR+ R+Y+ + + I + + Sbjct: 65 LGTVDLTGCELYVNAQPCPMCAGAVYWARLERVYFANTAAESARIGF-DDVRIDTELNRN 123 Query: 126 PEIYP----GISEQRSRQIIQDFFK 146 P+ + ++R+R++ D+ + Sbjct: 124 PQDRGIPFEHVPDRRAREVFDDWLR 148 >gi|225874834|ref|YP_002756293.1| guanine deaminase [Acidobacterium capsulatum ATCC 51196] gi|225793201|gb|ACO33291.1| guanine deaminase [Acidobacterium capsulatum ATCC 51196] Length = 162 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 1/100 (1%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + F+ A+ A P GAV V +K+++ A N D TAHAE+ AIR Sbjct: 7 QTHATFLRRAIALALENVQAGKGGPFGAVIVREDKVVAEAANSVFTTNDPTAHAEVNAIR 66 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 CR L L +Y + EPC MC AA A + R+Y+ Sbjct: 67 AACRNLGVFELRGCVIYTSSEPCPMCLAACYWAHLDRIYF 106 >gi|168185037|ref|ZP_02619701.1| guanine deaminase [Clostridium botulinum Bf] gi|237794579|ref|YP_002862131.1| guanine deaminase [Clostridium botulinum Ba4 str. 657] gi|182671910|gb|EDT83871.1| guanine deaminase [Clostridium botulinum Bf] gi|229262002|gb|ACQ53035.1| guanine deaminase [Clostridium botulinum Ba4 str. 657] Length = 157 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 2/113 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M K + M ++ +E P G+ V + ++I+ A N D TAH E+ I Sbjct: 1 MDKNEI-MDLCVKSCMEGMKNHEGGPFGSAIVKDGEVIAVAHNTVVGDNDPTAHGEVNVI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 R C+ LS L +LY T EPC MC +AI A I ++YYG + I Sbjct: 60 RKACKKLSTFDLSGCELYTTSEPCPMCMSAIIWANISKVYYGCTVEDARDIGF 112 >gi|227824209|ref|YP_002828182.1| CMP/dCMP deaminase, zinc-binding [Sinorhizobium fredii NGR234] gi|227343211|gb|ACP27429.1| CMP/dCMP deaminase, zinc-binding [Sinorhizobium fredii NGR234] Length = 171 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 34/107 (31%), Positives = 55/107 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M++ F+ A+ A+ + P GAV V N ++I R N + D T+HAE+ A+R Sbjct: 19 MQEEERFLREAVSLARTNLEKGGRPFGAVVVRNGEVIGRGVNEMLDTGDPTSHAELNAVR 78 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 + ++ L + +Y + PC MC AA+ +A I + Y SN G Sbjct: 79 AAAKTIASLRLEDATVYASGHPCPMCLAAMRMAGITEIAYAHSNEDG 125 >gi|124486136|ref|YP_001030752.1| hypothetical protein Mlab_1318 [Methanocorpusculum labreanum Z] gi|124363677|gb|ABN07485.1| CMP/dCMP deaminase, zinc-binding protein [Methanocorpusculum labreanum Z] Length = 151 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 10/146 (6%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + +M A EEA IP+GAV V N +I+ R N+ + + H E+ A+ Sbjct: 3 ESMDQYMRAAYEEALAGRNEGGIPIGAVLVRNGEIVGRGHNQRVQKGNPILHGEMDALSN 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + E LY TL PC MC+ AI L +I + G G T F Sbjct: 63 SGRHPASFY-KECTLYTTLAPCIMCSGAILLYKIPEVVVGEDVNYPGE----TAFLRSRG 117 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147 I ++ + ++++ F +E Sbjct: 118 V--KVTI---LNNEEIIRMMKTFIEE 138 >gi|46447463|ref|YP_008828.1| hypothetical protein pc1829 [Candidatus Protochlamydia amoebophila UWE25] gi|46401104|emb|CAF24553.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 156 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 2/118 (1%) Query: 7 FMSCALEEAQNAALRNEI-PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A+E A ++E P GA V +I++ N + +D T HAE+ IR R Sbjct: 4 YMRRAIESAYEGIDKDEGGPFGACIVDKQGQILAVTHNTVLKDQDPTCHAEMNCIREAAR 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 L IL L+ T EPC MC AAI ARI ++Y G F+ Sbjct: 64 RLKTHILSGYTLFTTAEPCPMCLAAIYWARIEKVYIGVKKECAARYGFDDAFFYEQLL 121 >gi|149236051|ref|XP_001523903.1| cytosine deaminase [Lodderomyces elongisporus NRRL YB-4239] gi|146452279|gb|EDK46535.1| cytosine deaminase [Lodderomyces elongisporus NRRL YB-4239] Length = 160 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M+ ALE+AQ + IP+G + + +++ R N+ + H E+ + Sbjct: 14 DDKKGMAIALEQAQISYNEGGIPIGGCLIHKDGRVLGRGYNKRVQNGSPILHGEMSVLEN 73 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----NGTQFY 117 R+ I + +Y TL PC MC AI L I+R+ G ++ GG E NG + Sbjct: 74 AGRLPHS-IYKDCTMYTTLSPCNMCTGAILLYGIKRVVMGENDTFVGGEELLKQNGVELV 132 Query: 118 TLATCHHSPEIYPGISEQR-SRQIIQDFFKER 148 + ++I+ F +E+ Sbjct: 133 N--------------LQDEGCKEILTKFIQEK 150 >gi|210076069|ref|XP_505753.2| YALI0F22517p [Yarrowia lipolytica] gi|199424977|emb|CAG78564.2| YALI0F22517p [Yarrowia lipolytica] Length = 150 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 11/143 (7%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ A+E+A + IP+GAV V + ++ + NR + H EI A++ Sbjct: 4 DDAKYMAMAIEQATKSKNEGGIPIGAVLVAGDGTVLGKGHNRRIQHGSAVHHGEIDALQN 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L+ ++ + +Y TL PC MC A + ++R+ G ++ GG + Sbjct: 64 AGR-LAGKVYKDATMYTTLSPCDMCTGACIMFGVKRVVMGENDTFVGG----DDYLRARG 118 Query: 122 CHHSPEIYPGISEQRSRQIIQDF 144 E+ + +Q++ +F Sbjct: 119 ----IEVV-NLKNDECKQLMDEF 136 >gi|78777832|ref|YP_394147.1| cytosine deaminase [Sulfurimonas denitrificans DSM 1251] gi|78498372|gb|ABB44912.1| Cytosine deaminase [Sulfurimonas denitrificans DSM 1251] Length = 145 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 10/143 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ A+EEA+ IP+G+V V++ KI+ R NR + HAE+ + R Sbjct: 2 DKFLQAAIEEAKKGLKEGGIPIGSVLVIDGKIVGRGHNRRVQDSSAILHAEMDCLENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + E + LY TL PC+MC+ A L +I ++ G + G E +C Sbjct: 62 MAASEY-KKAILYSTLSPCSMCSGAALLYKIPKIIIGENRTFKGPEEYV------RSCGV 114 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 EI + Q ++Q F ++ Sbjct: 115 EVEI---LDNQECFDMMQSFIQK 134 >gi|146292307|ref|YP_001182731.1| cytosine deaminase [Shewanella putrefaciens CN-32] gi|145563997|gb|ABP74932.1| Cytosine deaminase [Shewanella putrefaciens CN-32] Length = 145 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 10/143 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ A++EA+ IP+G+V V++ KI++R N+ + HAE+ + R Sbjct: 2 DEFLQAAIDEAKQGLAEGGIPIGSVLVIDGKIVARGHNKRVQQGSAVLHAEMDCLENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + + LY TL PC MC+ AI L I ++ G + G + Y + Sbjct: 62 LSAADYQKG-TLYSTLSPCDMCSGAILLYGIPKVVVGENITFQG-----PEAYVQSR--- 112 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 ++ + +Q++ DF Sbjct: 113 GVDVTV-VDNPECKQLMLDFIAN 134 >gi|300786467|ref|YP_003766758.1| deaminase [Amycolatopsis mediterranei U32] gi|299795981|gb|ADJ46356.1| deaminase [Amycolatopsis mediterranei U32] Length = 160 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 47/96 (48%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 ++ A+ A P GA+ V + KI+S NR D TAHAE++AIR C+ Sbjct: 9 QAWLDEAVRIATRNVENGGGPFGALIVRDGKIVSTGVNRVTANLDPTAHAEVVAIRAACQ 68 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L L L + EPC MC ++ AR+ ++ + Sbjct: 69 ELGTFKLDGCVLVSSCEPCPMCLSSALWARVDKVLF 104 >gi|238881956|gb|EEQ45594.1| conserved hypothetical protein [Candida albicans WO-1] Length = 270 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 3/143 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ +L A L NE PV + V ++KIIS N + T HAE +A++ Sbjct: 1 MAISLFVGYKALLNNETPVSCIVVDSKSDKIISIGYNYTNHSLNGTQHAEFIALQRFGEQ 60 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC-HH 124 S ++ LYVT+EPC MCA+ + I+++ +G N + GG ++ T + Sbjct: 61 KSSIDYNDLILYVTVEPCIMCASYLRQLGIKKVIFGCGNDRFGGNGTILPIHSDITLPNA 120 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 + GI + Q++++F+ + Sbjct: 121 TYSSIGGICRTKGIQLLRNFYIQ 143 >gi|284040576|ref|YP_003390506.1| cytosine deaminase [Spirosoma linguale DSM 74] gi|283819869|gb|ADB41707.1| Cytosine deaminase [Spirosoma linguale DSM 74] Length = 144 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 12/144 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A+ +A+ + IP+G+ V N ++++ N+ + + H E+ + R Sbjct: 2 DEFMQEAINQARKSLSEGGIPIGSSLVKNGELVASGHNKRVQENNPILHGEMDCLNNAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + S +Y TL PC MCA I +I ++ G S G E Q H Sbjct: 62 VGS---FRNTVIYSTLMPCYMCAGTIVQFKIPKVIVGESRTFLGAREFMEQ--------H 110 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 E+ + ++ F E+ Sbjct: 111 GVEVID-LDLPECVDMMNQFIAEK 133 >gi|38677840|emb|CAE82258.1| putative cytosine deaminase [Candida albicans] Length = 150 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 60/147 (40%), Gaps = 11/147 (7%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + AL++A+ + IP+G + + ++ + N + H E+ A+ Sbjct: 4 DDKKGLQIALDQAKKSYSEGGIPIGSCIISSDGTVLGQGHNERIQKHSAILHGEMSALEN 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R+ + + +Y TL PC+MC AI L +R+ G N G E Sbjct: 64 AGRLPGKTY-KDCTIYTTLSPCSMCTGAILLYGFKRVVMG-ENVNFLGNEKLL------- 114 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148 + E+ +++Q ++ F KE+ Sbjct: 115 IENGVEVV-NLNDQECIDLMAKFIKEK 140 >gi|33595634|ref|NP_883277.1| hypothetical protein BPP0953 [Bordetella parapertussis 12822] gi|33600148|ref|NP_887708.1| hypothetical protein BB1162 [Bordetella bronchiseptica RB50] gi|33565712|emb|CAE40360.1| conserved hypothetical protein [Bordetella parapertussis] gi|33567746|emb|CAE31660.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 169 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 51/105 (48%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + + A+ A+ A P GA+ + +++R NR D TAHAE+LA+R Sbjct: 15 DDDALLREAIALARANARAGGRPFGALVAKDGVVLARGVNRMLADHDPTAHAELLALREA 74 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 R L L +Y + +PC MC AA+ ++ + R Y SN + Sbjct: 75 GRALRSARLDGCVVYASGQPCPMCLAAMRMSGVARAVYAYSNEQA 119 >gi|254577709|ref|XP_002494841.1| ZYRO0A10890p [Zygosaccharomyces rouxii] gi|238937730|emb|CAR25908.1| ZYRO0A10890p [Zygosaccharomyces rouxii] Length = 248 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 7/149 (4%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 M AL + A E PV + V ++I++ N AHAE + I Sbjct: 7 HLRHMETALRLGRYALDHGETPVACIFVHIPTDQIVAFGMNDTNRSLTGVAHAEFMGIEQ 66 Query: 62 GCRILSQEILP----EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 +S + L ++ LYVT+EPC MCA+A+ I ++ +GA N + GG Sbjct: 67 IREFVSPDELVPFFGDIALYVTVEPCIMCASALKQLGIGKVIFGAGNDRFGGNGTVLSIN 126 Query: 118 TLA-TCHHSPEIYPGISEQRSRQIIQDFF 145 + T E PG+ + + +++ F+ Sbjct: 127 QDSCTLGGKHESIPGVLRREAIMLLRYFY 155 >gi|329964682|ref|ZP_08301736.1| riboflavin biosynthesis protein RibD [Bacteroides fluxus YIT 12057] gi|328525082|gb|EGF52134.1| riboflavin biosynthesis protein RibD [Bacteroides fluxus YIT 12057] Length = 349 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 62/152 (40%), Gaps = 19/152 (12%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M ++ AQN VGAV V + KII + AHAE+ A Sbjct: 1 MNTEEKYMRRCIQLAQNGLCNAAPNPMVGAVIVCDGKIIGEGYHIRCGE----AHAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + +L + +YV+LEPC CA I +I R+ G +P Sbjct: 57 IRS---VKEPALLKKSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCRDPFSKVAGR 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ E+ + +I+ F Sbjct: 114 GIQKLKDAGR----EVIVGVLEEECKSLIRRF 141 >gi|290771180|emb|CAY80744.2| Tad2p [Saccharomyces cerevisiae EC1118] Length = 250 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 66/156 (42%), Gaps = 13/156 (8%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVA--VLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M A+ A+ A +E PV + ++++ N + AHAE + I Sbjct: 2 QHVKHMRTAVRLARYALDHDETPVACIFEHTPTGQVMAYGMNDTNKSLTGVAHAEFMGID 61 Query: 61 MGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 +L ++ ++ LYVT+EPC MCA+A+ I ++ +G N + GG Sbjct: 62 QIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGGNGTVLSV 121 Query: 117 YTL-----ATCHHS--PEIYPGISEQRSRQIIQDFF 145 + + E PGI + + +++ F+ Sbjct: 122 NHDTCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 157 >gi|94496883|ref|ZP_01303457.1| Putative cytosine/adenosine deaminase [Sphingomonas sp. SKA58] gi|94423559|gb|EAT08586.1| Putative cytosine/adenosine deaminase [Sphingomonas sp. SKA58] Length = 175 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 8/146 (5%) Query: 2 KKGNVFMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + +M A++ A+ + + P+ A+ VL+ ++++ N E D TAHAE++A R Sbjct: 15 ETDSKWMQRAIDLARSKGSSPQDTPIAAIIVLDGAVLAQGVNETDERCDATAHAEMMAFR 74 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN------GT 114 ++ L LY TL+PC MC A +I R+ YGA + Sbjct: 75 AAGQVHGDMDLRGATLYSTLQPCGMCTMASIWTKIGRIVYGAGRDDVHAMYFEDRHLDTM 134 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQI 140 F A + G + + Sbjct: 135 DFIADAWRD-DLTLEGGCLKDACASL 159 >gi|323347994|gb|EGA82253.1| Tad2p [Saccharomyces cerevisiae Lalvin QA23] Length = 244 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 13/151 (8%) Query: 8 MSCALEEAQNAALRNEIPVGAVA--VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ A+ A +E PV + ++++ N + AHAE + I + Sbjct: 1 MRTAVRLARYALDHDETPVACIFEHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 60 Query: 66 LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-- 119 L ++ ++ LYVT+EPC MCA+A+ I ++ +G N + GG Sbjct: 61 LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGGNGTVLSVNHDTC 120 Query: 120 ---ATCHHS--PEIYPGISEQRSRQIIQDFF 145 + + E PGI + + +++ F+ Sbjct: 121 TLVPKNNSAAGYESIPGILRKEAIMLLRYFY 151 >gi|238019274|ref|ZP_04599700.1| hypothetical protein VEIDISOL_01138 [Veillonella dispar ATCC 17748] gi|237863973|gb|EEP65263.1| hypothetical protein VEIDISOL_01138 [Veillonella dispar ATCC 17748] Length = 404 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 60/153 (39%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M A+ A+ A P VGAV V +N II + K TAHAE+ A Sbjct: 1 MVDDVAYMKRAIALAKLATGHTSPNPLVGAVVVKDNTIIGEGYHH----KAGTAHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + LYVTLEPC CA I A I ++ G+++P Sbjct: 57 LNQAG-----DNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVVVGSTDPNPLVSGK 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G A E+ + + ++ + FF Sbjct: 112 GMDLLREAG----IEVVCPVCSEECAELNEHFF 140 >gi|254466209|ref|ZP_05079620.1| cytosine deaminase [Rhodobacterales bacterium Y4I] gi|206687117|gb|EDZ47599.1| cytosine deaminase [Rhodobacterales bacterium Y4I] Length = 148 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 15/150 (10%) Query: 1 MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M + + A EEA+ P+G+V +++++ N+ + D AH E+ A+ Sbjct: 2 MTDDDRRLLRIAYEEAKAGFDEGGCPIGSVLARGGQVVAQGRNQRVQKGDPIAHGEMDAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R R S + LY +L PC MC+ I I R+ G + GG +F Sbjct: 62 RKAGRQTS---YRDTVLYTSLSPCMMCSGTIVQFGIPRVVIGDTQNFGG----NEEFLRA 114 Query: 120 ATCHHSPEIYPGISEQ-RSRQIIQDFFKER 148 E+ I+E ++Q F +E+ Sbjct: 115 RG----VEVV--IAEDPDCIALMQRFIREK 138 >gi|312215394|emb|CBX95346.1| similar to cytosine deaminase [Leptosphaeria maculans] Length = 152 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 13/150 (8%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M ++ ALEEA+ + +P+GA V KI+ R N + T HAEI A+ Sbjct: 1 MSSADIGFQAALEEARTGSSEGGLPIGACLVSAQGKILGRGHNMRIQRGSATLHAEISAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R+ + + +Y TL PC MC A L +++R+ G + GG ++ Sbjct: 61 ERAGRLPASAY-QDATMYTTLSPCDMCTGACILYKVKRVVIGENQTFVGGEDHLKS---- 115 Query: 120 ATCHHSPEIYPGISEQ-RSRQIIQDFFKER 148 E+ + + + ++ DF KE+ Sbjct: 116 ----KGIEVV--VLQDPECQNLMADFIKEK 139 >gi|260893814|ref|YP_003239911.1| riboflavin biosynthesis protein RibD [Ammonifex degensii KC4] gi|260865955|gb|ACX53061.1| riboflavin biosynthesis protein RibD [Ammonifex degensii KC4] Length = 370 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 46/152 (30%), Positives = 64/152 (42%), Gaps = 21/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +K+ FM ALE A A R P VGAV V ++I+ +R + HAEI A Sbjct: 4 LKEDEFFMRRALELALKARGRTSPNPMVGAVLVKEGRVIAEGYHRRAGM----PHAEIEA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 +R E LYV LEPC C AI A I+R+ +P Sbjct: 60 LRAAG-----EEARGATLYVNLEPCCHVGRTGPCTEAIIAAGIKRVVVAMEDPNPLVAGK 114 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ EQ +R++ + F Sbjct: 115 GIKILREAGL----EVTVGVLEQEARRLNEVF 142 >gi|119962522|ref|YP_949093.1| cytidine/deoxycytidylate deaminase [Arthrobacter aurescens TC1] gi|119949381|gb|ABM08292.1| putative cytidine/deoxycytidylate deaminase [Arthrobacter aurescens TC1] Length = 164 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 52/119 (43%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 F++ ++E A L + P GAV V + NR D TAHAE+ AIR CR Sbjct: 8 EQFLATSIELATANVLNSGGPFGAVIVTADGRAFEGVNRVTATNDPTAHAEVTAIRNACR 67 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L L LY + EPC MC A+ AR+ R+++ A + + + Sbjct: 68 ELGTFDLSGATLYTSCEPCPMCLASALWARVDRVFFAADRHDAASVGFDDAVFYEYFEN 126 >gi|86139939|ref|ZP_01058504.1| cytosine deaminase [Roseobacter sp. MED193] gi|85823357|gb|EAQ43567.1| cytosine deaminase [Roseobacter sp. MED193] Length = 147 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 14/146 (9%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + A EEA+ P+G+V +++++ N+ + D AH E+ A+R Sbjct: 4 DDTRLLRIAYEEAKAGFDEGGCPIGSVLARGGEVVAQGRNQRVQKGDPIAHGEMDALRKA 63 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R Q+ + LY +L PC MC I I R+ G N GG E +F Sbjct: 64 GR---QKTYRDTTLYTSLSPCMMCTGTIIQFGIPRVVIG-ENKNFGGNE---EFLRSKG- 115 Query: 123 HHSPEIYPGISEQ-RSRQIIQDFFKE 147 E+ +++ +++ F E Sbjct: 116 ---VEVI--VADDPDCIALMRRFIDE 136 >gi|27381264|ref|NP_772793.1| hypothetical protein blr6153 [Bradyrhizobium japonicum USDA 110] gi|27354431|dbj|BAC51418.1| blr6153 [Bradyrhizobium japonicum USDA 110] Length = 159 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 43/150 (28%), Positives = 61/150 (40%), Gaps = 14/150 (9%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 + F+ + A+ + P G V V + K++ N D TAHAE LA Sbjct: 5 RDEHFLRLSFAVARRSLTHGNHPFGCVVVAADGKVLIETENGYMPDCDGTAHAERLAATQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 CR LS+E+L E LY + EPC MCA AI A I R+ YG S + G+ T Sbjct: 65 ACRTLSREVLAEATLYSSAEPCAMCAGAIYWAGIGRVVYGLSEHRLRGVTG--NHPENPT 122 Query: 122 CH-----------HSPEIYPGISEQRSRQI 140 E+ + E + + Sbjct: 123 LDLPCRTVFAGGQRPTEVVGPLLEDEAEVL 152 >gi|239996129|ref|ZP_04716653.1| cytidine/deoxycytidylate deaminase family protein [Alteromonas macleodii ATCC 27126] Length = 109 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 44/90 (48%) Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + + L + LYVTLEPC+MCA + AR++R+ +GA + K G + Sbjct: 1 KEAAAAVQNYRLIDATLYVTLEPCSMCAGMLVHARVKRVVFGAKDAKTGAAGSVMNLLQH 60 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +H E+ G+ + DFF++RR Sbjct: 61 PALNHQLEVVSGVLADECANKLSDFFRKRR 90 >gi|257126309|ref|YP_003164423.1| riboflavin biosynthesis protein RibD [Leptotrichia buccalis C-1013-b] gi|257050248|gb|ACV39432.1| riboflavin biosynthesis protein RibD [Leptotrichia buccalis C-1013-b] Length = 371 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 20/156 (12%) Query: 1 MKK--GNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 MK+ +M A+E A+ A N P VGAV V K+I ++ HAE+ Sbjct: 1 MKENIDEKYMRMAIELAKKGARAVNPNPMVGAVVVQAGKVIGTGYHKYFGG----PHAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+ + + + L +YVTLEPC CA I ++R G+S+P Sbjct: 57 YALDEASK--NSKDLSNATIYVTLEPCSHYGKTPPCAEKIVKLGLKRCVIGSSDPNPKVA 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G Q A + + ++ ++ Q FFK Sbjct: 115 GKGVQILKNAGIG----VAENVLKEECDKLNQVFFK 146 >gi|222106196|ref|YP_002546987.1| CMP/dCMP deaminase zinc-binding [Agrobacterium vitis S4] gi|221737375|gb|ACM38271.1| CMP/dCMP deaminase zinc-binding [Agrobacterium vitis S4] Length = 163 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 58/150 (38%), Gaps = 14/150 (9%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ + + A A P GA+ V + +++ N +D+T HAE + + Sbjct: 10 DHEYFLRLSFKVALRAQETGNHPFGAILVGPDGEVLMEQENAYNPTRDMTGHAERVLMTR 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + + E L + +Y + EPC MCA A A I R+ +G S + + T Sbjct: 70 ASQAYTPERLNQCTMYTSAEPCAMCAGAAYWAGIGRVVFGLSESQLKAMTG--NHPENPT 127 Query: 122 CH-----------HSPEIYPGISEQRSRQI 140 S E+ + + + ++ Sbjct: 128 LDLPCRVVFEAGQRSVEVIGPLLSEEAAKL 157 >gi|19704838|ref|NP_602333.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296327621|ref|ZP_06870165.1| riboflavin biosynthesis protein RibD [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19712714|gb|AAL93632.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296155267|gb|EFG96040.1| riboflavin biosynthesis protein RibD [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 369 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 25/155 (16%) Query: 2 KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 +M+ A+E A+ + P VGAV V + KII ++ HAE+ Sbjct: 4 NSDEKYMARAIELAKRG--TGGVNPNPLVGAVIVKDGKIIGEGWHKKFGG----PHAEVW 57 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ E +YVTLEPC CA I A I+R +P Sbjct: 58 ALNEAG-----ENAKGATVYVTLEPCSHQGKTPPCAKRIIEAGIKRCVVACIDPNPLVAG 112 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + + E+ G+ E+ +++I + FFK Sbjct: 113 KGMKIIE----NAGIEVELGVLEKEAKEINKIFFK 143 >gi|146416895|ref|XP_001484417.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC 6260] Length = 150 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 11/147 (7%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ A+EEA+ +P+G A+ + ++ R N + T H EI + Sbjct: 4 DDEKGLAIAIEEAKKGYEEGGVPIGGALISEDGTVLGRGHNLRFQKDSATLHGEISTLEN 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R+ + +Y TL PC+MC+ A + ++R+ G N G E+ + + Sbjct: 64 AGRLKGS-VYKNCTMYTTLSPCSMCSGACIMYGVKRVVVG-ENETFMGAEDWIRKLGIEV 121 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148 + ++ Q + ++ F KER Sbjct: 122 VN--------LNNQECKDLMAKFIKER 140 >gi|284167540|ref|YP_003405818.1| CMP/dCMP deaminase zinc-binding protein [Haloterrigena turkmenica DSM 5511] gi|284017195|gb|ADB63145.1| CMP/dCMP deaminase zinc-binding protein [Haloterrigena turkmenica DSM 5511] Length = 163 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 1/143 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 M A E A+ A R + P G V V ++ +I NR D+ H E+ Sbjct: 19 DHEAHMRRAFELAREAIDRGDRPFGTVLVRDDTVIMADSNRVVTEDDIRRHPELHLAYRA 78 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA-SNPKGGGIENGTQFYTLAT 121 CR L + E +Y + EPC MCA + A R+ Y S+ ++ + Sbjct: 79 CRELDPDERAETVMYTSTEPCPMCAGGMISAGFGRVVYSVGSDELPAFTDSEPAVRSAEI 138 Query: 122 CHHSPEIYPGISEQRSRQIIQDF 144 ++ + + RQ+ +DF Sbjct: 139 LDGVSDVTGPVLNEEGRQLHRDF 161 >gi|160885546|ref|ZP_02066549.1| hypothetical protein BACOVA_03546 [Bacteroides ovatus ATCC 8483] gi|156109168|gb|EDO10913.1| hypothetical protein BACOVA_03546 [Bacteroides ovatus ATCC 8483] Length = 351 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 24/154 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M++ +M +E A+N +P VGAV V N +II + AHAE+ Sbjct: 7 MEE-EKYMRRCIELAKNGLC--NVPPNPTVGAVIVCNGRIIGEGYHIRCGE----AHAEV 59 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 AIR + + +L +YV+LEPC CA I +I R+ G +P Sbjct: 60 NAIRS---VKDESLLKHSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVA 116 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ GI E+ + +I+ F Sbjct: 117 GRGIQKLRDAGR----EVTVGILEEECQSLIRRF 146 >gi|260172134|ref|ZP_05758546.1| riboflavin biosynthesis protein ribD [Bacteroides sp. D2] gi|315920443|ref|ZP_07916683.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313694318|gb|EFS31153.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 351 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 24/154 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M++ +M +E A+N +P VGAV V N +II + AHAE+ Sbjct: 7 MEE-EKYMRRCIELAKNGLC--NVPPNPMVGAVIVCNGRIIGEGYHIRCGE----AHAEV 59 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 AIR + + +L +YV+LEPC CA I +I R+ G +P Sbjct: 60 NAIRS---VKDESLLKHSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVA 116 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ E+ + +I+ F Sbjct: 117 GRGIQKLRDAGR----EVIVGVLEEECQSLIRRF 146 >gi|206578758|ref|YP_002237260.1| cytidine/deoxycytidylate deaminase family protein [Klebsiella pneumoniae 342] gi|206567816|gb|ACI09592.1| cytidine/deoxycytidylate deaminase family protein [Klebsiella pneumoniae 342] Length = 152 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 55/107 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + ++ AL A P GAV V +++I++ A N D TAHAE+ A+R Sbjct: 1 MSADDRYLQRALALANQNIADGGRPFGAVLVRHDEIVAEAVNTFHLNGDPTAHAELNAVR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 L E+L E +Y + +PC MC +A+ L +R +++ SN G Sbjct: 61 DLAARLGSEVLRECVIYASGQPCPMCLSALYLTGVREVFFANSNQDG 107 >gi|198273955|ref|ZP_03206487.1| hypothetical protein BACPLE_00091 [Bacteroides plebeius DSM 17135] gi|198273033|gb|EDY97302.1| hypothetical protein BACPLE_00091 [Bacteroides plebeius DSM 17135] Length = 346 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 19/152 (12%) Query: 1 MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M ++ A+N VGAV V + KII + HAE+ A Sbjct: 1 MTIDEKYMRRCIQLARNGICHAAPNPMVGAVIVRDGKIIGEGYHVRCGEG----HAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + + +L + +YV+LEPC CA I I R+ G +P Sbjct: 57 I---ASVKDESLLKDATIYVSLEPCSHYGKTPPCADLIIRKGIPRVVVGCVDPFSLVAGR 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ E+ R++I+ F Sbjct: 114 GIQKLRDAG----IEVTVGVLEKECRELIRAF 141 >gi|147919375|ref|YP_686889.1| putative cytosine deaminase [uncultured methanogenic archaeon RC-I] gi|110622285|emb|CAJ37563.1| putative cytosine deaminase [uncultured methanogenic archaeon RC-I] Length = 144 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 12/143 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +VFM A++EA+ IP+G+V V+N +I+ N+ + D HAEI +R R Sbjct: 2 DVFMQAAIDEAKKGLAEGGIPIGSVMVINRRIVGSGHNKRVQDGDPVMHAEIDCLRSAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + LY TL PC +CA A+ I+++ G S G H Sbjct: 62 VG---RYKDAVLYSTLMPCYLCAGAVVQFGIKKVIVGESKNFEGARAFMEA--------H 110 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 E+ + + ++ +F ++ Sbjct: 111 GVEVVD-LDLPECKDMMAEFIQK 132 >gi|293115762|ref|ZP_05792940.2| guanine deaminase [Butyrivibrio crossotus DSM 2876] gi|292808437|gb|EFF67642.1| guanine deaminase [Butyrivibrio crossotus DSM 2876] Length = 194 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 1/107 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 K ++ A+E ++ + P G V V + +II GN K T HAE + + Sbjct: 36 WKSDEYYLEKAIEVSRKSRAGGNTPFGCVLVDGDGEIILEQGNVEITEKRCTGHAETVIM 95 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 ++ ++ L LY T EPC MCA A+ + ++ Y + + Sbjct: 96 ERASKLYDKKFLWNCTLYTTCEPCPMCAGAVYWGNVGKVVYAMTEER 142 >gi|188996871|ref|YP_001931122.1| riboflavin biosynthesis protein RibD [Sulfurihydrogenibium sp. YO3AOP1] gi|188931938|gb|ACD66568.1| riboflavin biosynthesis protein RibD [Sulfurihydrogenibium sp. YO3AOP1] Length = 371 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 42/160 (26%), Positives = 61/160 (38%), Gaps = 21/160 (13%) Query: 1 MKKGNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +K +M AL+ A + VGAV V + KII + + K HAE A Sbjct: 4 IKDLESYMKIALDLAKIRKGLTHPNPTVGAVIVKDGKIIGKGYH----TKAGMPHAEREA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I+ L ++VTLEPC C AI I + G + Sbjct: 60 IKDA--KEKGYDLKGSTMFVTLEPCCHYGRTPPCTNAIIEEGISEIVIGVLDQNPVVKGQ 117 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 G H ++ G+ E+ +I +DFF KE+R Sbjct: 118 GVNILKS----HGIKVITGVLEKECEKINEDFFTYIKEKR 153 >gi|124009330|ref|ZP_01694009.1| cytosine deaminase [Microscilla marina ATCC 23134] gi|123985107|gb|EAY25051.1| cytosine deaminase [Microscilla marina ATCC 23134] Length = 144 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 12/144 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A+ +A+ + IP+G+V + N +II++ N+ + + H E+ + R Sbjct: 2 DKFMEAAIAQAEKSYNEGGIPIGSVLMRNGEIIAQGHNKRVQEANPILHGEMDCLLNAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 I S + +Y TL PC MCA I I+++ G S G + H Sbjct: 62 IGS---YKDTVIYSTLMPCYMCAGTIVQFNIKKVVVGESRTFTGARKFMES--------H 110 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 E+ ++ Q+ ++ F E+ Sbjct: 111 GVEVVD-LNLQKCVDMMTRFIDEK 133 >gi|212540050|ref|XP_002150180.1| cytosine deaminase, putative [Penicillium marneffei ATCC 18224] gi|210067479|gb|EEA21571.1| cytosine deaminase, putative [Penicillium marneffei ATCC 18224] Length = 148 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 14/150 (9%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M+ F+ A+EEA+ +P+GA V + KI+ R N + T H EI A+ Sbjct: 1 METDPGFI-AAVEEARQGQAEGGVPIGACLVSKDGKILGRGHNMRFQKGSATLHGEISAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R+ + +Y TL PC MC A L +++R+ G + GG Q+ Sbjct: 60 ENSGRLPASAY-EGATMYTTLSPCDMCTGACILYKVKRVVVGENKTFLGG----EQYLQS 114 Query: 120 ATCHHSPEIYPGISE-QRSRQIIQDFFKER 148 E+ + + + +++ DF +E+ Sbjct: 115 RG----IEVV--VLQNEECIKLMTDFIREK 138 >gi|209885117|ref|YP_002288974.1| CMP/dCMP deaminase, zinc-binding [Oligotropha carboxidovorans OM5] gi|209873313|gb|ACI93109.1| CMP/dCMP deaminase, zinc-binding [Oligotropha carboxidovorans OM5] Length = 227 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 2/104 (1%) Query: 2 KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ M+ A++ + A + P GAV V + ++++ +GN D +AHAE+ AI Sbjct: 72 EQDRKHMALAIQTMRQAGIVDKTGGPFGAVVVRDGEVLAASGNSVLRDNDPSAHAEVNAI 131 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 R+ C+ + L L+ + E C MC A ARI ++YY A+ Sbjct: 132 RIACKKIGAPNLRGATLFTSCECCPMCYATAYWARIDKIYYAAA 175 >gi|254495568|ref|ZP_05108490.1| cytosine deaminase [Legionella drancourtii LLAP12] gi|254355138|gb|EET13751.1| cytosine deaminase [Legionella drancourtii LLAP12] Length = 147 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 10/142 (7%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 ++ A+EEA+ + IP+GAV V ++II R N+ + H E+ A+ Sbjct: 2 SHQRYLEAAIEEARRSLAEGGIPIGAVLVYQDRIIGRGHNQRVQKGSAILHGEMDALENA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R +I + LY TL PC MC+ AI L +I + G N G E+ T Sbjct: 62 GR-QQAKIYEQSILYTTLSPCAMCSGAILLYKIPYVVIG-ENQTFIGEES---LLTSRGV 116 Query: 123 HHSPEIYPGISEQRSRQIIQDF 144 E+ + + +++ F Sbjct: 117 --KLEV---LQNDKCITMMRHF 133 >gi|153001599|ref|YP_001367280.1| cytosine deaminase [Shewanella baltica OS185] gi|217972471|ref|YP_002357222.1| Cytosine deaminase [Shewanella baltica OS223] gi|151366217|gb|ABS09217.1| Cytosine deaminase [Shewanella baltica OS185] gi|217497606|gb|ACK45799.1| Cytosine deaminase [Shewanella baltica OS223] Length = 145 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 10/142 (7%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F++ A+EEA+ IP+G+V V++ KI+ R N+ + HAE+ + R Sbjct: 2 DEFLAAAIEEAKQGLAEGGIPIGSVLVIDGKIVGRGHNKRVQKGSSVLHAEMDCLENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + E LY TL PC MC+ A+ L I ++ G + G Sbjct: 62 FSAAEY-QRATLYSTLSPCDMCSGAVLLYGIPKVIVGENTTFQG--------PEAYVKSR 112 Query: 125 SPEIYPGISEQRSRQIIQDFFK 146 ++ + +Q++QDF Sbjct: 113 GVDVTV-VDNAECKQLMQDFIA 133 >gi|320534251|ref|ZP_08034764.1| cytidine and deoxycytidylate deaminase zinc-binding region [Actinomyces sp. oral taxon 171 str. F0337] gi|320133534|gb|EFW25969.1| cytidine and deoxycytidylate deaminase zinc-binding region [Actinomyces sp. oral taxon 171 str. F0337] Length = 108 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 43/108 (39%), Positives = 55/108 (50%) Query: 42 NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 N D TAHAEI A+R L L L VTLEPCTMCA AI LAR+ RL G Sbjct: 1 NAREAEHDPTAHAEIRALRAAGAALGDSHLDGCTLVVTLEPCTMCAGAIVLARVARLVLG 60 Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A P+ G + +H E+ G+ Q+S+ ++ FF +RR Sbjct: 61 AWEPRTGACGSVRDVVRDTRSNHQVEVRAGLRAQQSQDLLTAFFADRR 108 >gi|313894496|ref|ZP_07828060.1| riboflavin biosynthesis protein RibD [Veillonella sp. oral taxon 158 str. F0412] gi|313440892|gb|EFR59320.1| riboflavin biosynthesis protein RibD [Veillonella sp. oral taxon 158 str. F0412] Length = 404 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M A+ A+ A P VGAV V +N II + K TAHAE+ A Sbjct: 1 MVDDVAYMKRAIALAKLATGHTSPNPLVGAVVVKDNTIIGEGYHH----KAGTAHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + LYVTLEPC CA I A I ++ G+++P Sbjct: 57 LNQAG-----DNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVVVGSTDPNPLVSGK 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G A+ E+ + + ++ + FF Sbjct: 112 GMDLLREAS----IEVVCPVCSEECVELNEHFF 140 >gi|332293298|ref|YP_004431907.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus 4H-3-7-5] gi|332171384|gb|AEE20639.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus 4H-3-7-5] Length = 147 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 1/104 (0%) Query: 1 MKKGNVFMSCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M + FM A+ A+ GAV V + ++I+ N +D T HAE+ I Sbjct: 1 MSYQSSFMKQAIALAREGKDTDGGGAFGAVIVRSGQVIAACHNLVGGSQDPTQHAELRCI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 ++ C+ L + L + DLY + PC MC A AR +YYGAS Sbjct: 61 QLACKALGTKDLSDCDLYTSCVPCMMCLGAARWARFENIYYGAS 104 >gi|294791895|ref|ZP_06757043.1| riboflavin biosynthesis protein RibD [Veillonella sp. 6_1_27] gi|294457125|gb|EFG25487.1| riboflavin biosynthesis protein RibD [Veillonella sp. 6_1_27] Length = 404 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 43/153 (28%), Positives = 62/153 (40%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M V+M A+E A+ A P VGAV V +N II + K TAHAE+ A Sbjct: 1 MVDDVVYMKRAIELAKLATGHTSPNPLVGAVVVKDNTIIGEGYHH----KAGTAHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + LYVTLEPC CA I A I ++ G+++P Sbjct: 57 LNQAG-----DNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGK 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A E+ + ++ + FF Sbjct: 112 GMELLREAG----IEVVCPVCSDECAELNEHFF 140 >gi|269798015|ref|YP_003311915.1| riboflavin biosynthesis protein RibD [Veillonella parvula DSM 2008] gi|269094644|gb|ACZ24635.1| riboflavin biosynthesis protein RibD [Veillonella parvula DSM 2008] Length = 404 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 43/153 (28%), Positives = 62/153 (40%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M V+M A+E A+ A P VGAV V +N II + K TAHAE+ A Sbjct: 1 MVDDVVYMKRAIELAKLATGHTSPNPLVGAVVVKDNTIIGEGYHH----KAGTAHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + LYVTLEPC CA I A I ++ G+++P Sbjct: 57 LNQAG-----DNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGK 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A E+ + ++ + FF Sbjct: 112 GMELLREAG----IEVVCPVCSDECAELNEHFF 140 >gi|327540848|gb|EGF27409.1| guanine deaminase [Rhodopirellula baltica WH47] Length = 155 Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 42/142 (29%), Positives = 57/142 (40%), Gaps = 7/142 (4%) Query: 6 VFMSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M + E P GA V + K I+ A N+ D TAHAE++AI + Sbjct: 4 QWMKSVVTMTIEGVAMGEHPFGAGVFTDSGKQIAVAHNQVVSRCDPTAHAEVVAIGKAAK 63 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-----NPKGGGIENGTQFYTL 119 L L + L T EPC MC AAI LA I R+ YGAS G + Sbjct: 64 KLGDPDLSGLWLVSTGEPCPMCLAAIGLAGIERVAYGASASTIETANFGTLGLTASELAD 123 Query: 120 ATCHHSPEIYPGISEQRSRQII 141 ++ GI E ++ Sbjct: 124 -QLSPPIQLTGGILEYDCSALL 144 >gi|228994217|ref|ZP_04154115.1| Cytosine deaminase [Bacillus pseudomycoides DSM 12442] gi|228765510|gb|EEM14166.1| Cytosine deaminase [Bacillus pseudomycoides DSM 12442] Length = 169 Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 3/111 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +F+ ALEEA+ A N PVGA+ V NN+I+ + NR D +AHAEI AIR Sbjct: 3 EMDRLFLEMALEEAKKAMKENTYPVGAIIVGRNNEILGKGRNRVHTQDDASAHAEIDAIR 62 Query: 61 MGCRI--LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 + L++E + LY TLEPC MC AI + R+ + ++ KG G Sbjct: 63 TAGKKLILAKENRLPITLYTTLEPCPMCTGAILFSHFTRVVWILNDDKGFG 113 >gi|2493560|sp|P78594|FCA1_CANAL RecName: Full=Cytosine deaminase; AltName: Full=Cytosine aminohydrolase gi|1762320|gb|AAC15782.1| cytosine deaminase [Candida albicans] Length = 150 Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 61/147 (41%), Gaps = 11/147 (7%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + AL++A+ + IP+G + ++ ++ + N + H E+ A+ Sbjct: 4 DDKKGLQVALDQAKKSYSEGGIPIGSCIISSDDTVLGQGHNERIQKHSAILHGEMSALEN 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R+ + + +Y TL PC+MC AI L +R+ G N G E Sbjct: 64 AGRLPGKTY-KDCTIYTTLSPCSMCTGAILLYGFKRVVMG-ENVNFLGNEKLL------- 114 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148 + E+ +++Q ++ F KE+ Sbjct: 115 IENGVEVV-NLNDQECIDLMAKFIKEK 140 >gi|84503628|ref|ZP_01001669.1| probable deaminase [Oceanicola batsensis HTCC2597] gi|84387959|gb|EAQ01010.1| probable deaminase [Oceanicola batsensis HTCC2597] Length = 155 Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 5/134 (3%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M K ++ M A++ A+ P + V + +I++ A N ++ D + HAEI AIR Sbjct: 1 MNKNDL-MQRAIDLAKENVENGGWPFSTIIVKDGEILAEAVNSVQKSHDPSDHAEIAAIR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ----F 116 + + L+ L +YV PC MC + +A++ + Y K + Sbjct: 60 IASKKLASPDLSGCTMYVVGLPCPMCLTCMIMAKLTDVVYAVDVEKKDAALSKLPLTDAL 119 Query: 117 YTLATCHHSPEIYP 130 Y L + H ++ Sbjct: 120 YDLVSEDHGGKVVS 133 >gi|319425606|gb|ADV53680.1| Cytosine deaminase [Shewanella putrefaciens 200] Length = 145 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 10/143 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ A++EA+ IP+G+V V++ I++R N+ + HAE+ + R Sbjct: 2 DEFLQAAIDEAKQGLAEGGIPIGSVLVIDGNIVARGHNKRVQQGSAVLHAEMDCLENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 LS + LY TL PC MC+ AI L I ++ G + G + Y + Sbjct: 62 -LSAADYQKATLYSTLSPCDMCSGAILLYGIPKVVVGENITFQG-----PEAYVQSR--- 112 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 ++ + +Q++ DF Sbjct: 113 GVDVTV-VDNPECKQLMLDFIAN 134 >gi|326791794|ref|YP_004309615.1| riboflavin biosynthesis protein RibD [Clostridium lentocellum DSM 5427] gi|326542558|gb|ADZ84417.1| riboflavin biosynthesis protein RibD [Clostridium lentocellum DSM 5427] Length = 363 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 59/153 (38%), Gaps = 25/153 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M AL A+ ++ P VGAV V +II + HAE+ AI Sbjct: 2 HENYMRYALNLAKQGG--GKVSPNPLVGAVLVKEGRIIGEGYHEVYGAN----HAEVNAI 55 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + + LYVTLEPC C I +I R+ G +P +G Sbjct: 56 KSASQKS-----EGATLYVTLEPCNHYGKTPPCTETIIQNKIMRVVVGMRDPNPLVAGSG 110 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + A E+ GI E+ R++ + F K Sbjct: 111 IKRLEDAG----IEVIVGILEEECRKLNEIFIK 139 >gi|92118729|ref|YP_578458.1| CMP/dCMP deaminase, zinc-binding [Nitrobacter hamburgensis X14] gi|91801623|gb|ABE63998.1| CMP/dCMP deaminase, zinc-binding protein [Nitrobacter hamburgensis X14] Length = 211 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 2/104 (1%) Query: 2 KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ MS A+ + A + P GAV V + ++++ +GN D +AHAE+ AI Sbjct: 56 EQDRKHMSLAILTMRQAGVVDKTGGPFGAVVVRDGEVLAASGNSVLRDNDPSAHAEVNAI 115 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 R+ C+ + L L+ + E C MC A ARI ++YY A+ Sbjct: 116 RIACKKIGAPNLRGATLFTSCECCPMCYATAYWARISKIYYAAA 159 >gi|303390913|ref|XP_003073687.1| deoxycytidylate deaminase [Encephalitozoon intestinalis ATCC 50506] gi|303302834|gb|ADM12327.1| deoxycytidylate deaminase [Encephalitozoon intestinalis ATCC 50506] Length = 149 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 23/149 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + FM AL++A+ A + E+PVG V V + ++S++ N K HAE+++IR Sbjct: 6 SRHSFFMDMALDQAEKAFDQLEVPVGCVVVRDGIVVSKSHNMTNANKSPLDHAEVISIR- 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFYT 118 YVT EPC MC + + R+YYG N G G + Sbjct: 65 ------STDCSNSTFYVTCEPCIMCMGILGRLKGVRVYYGCKNEIFGSETICGVGIESTY 118 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + R +I+Q F+ Sbjct: 119 LP-------------DDRCFKILQKFYSR 134 >gi|153941176|ref|YP_001390638.1| guanine deaminase [Clostridium botulinum F str. Langeland] gi|152937072|gb|ABS42570.1| guanine deaminase [Clostridium botulinum F str. Langeland] gi|295318715|gb|ADF99092.1| guanine deaminase [Clostridium botulinum F str. 230613] Length = 157 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 2/113 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M K + M ++ +E P G+ V + ++I+ A N D TAH E+ I Sbjct: 1 MDKNEI-MDLCVKSCMEGMKNHEGGPFGSAIVKDGEMIAVAHNTVVGDNDPTAHGEVNVI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 R C+ L+ L +LY T EPC MC +AI A I ++YYG + I Sbjct: 60 RKACKKLNTFDLSGCELYTTSEPCPMCMSAIIWANISKVYYGCTVEDARDIGF 112 >gi|330996373|ref|ZP_08320256.1| riboflavin biosynthesis protein RibD [Paraprevotella xylaniphila YIT 11841] gi|329573231|gb|EGG54845.1| riboflavin biosynthesis protein RibD [Paraprevotella xylaniphila YIT 11841] Length = 358 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 43/159 (27%), Positives = 61/159 (38%), Gaps = 21/159 (13%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +MS ++ A+N VGAV V + KII + HAE+ A Sbjct: 1 MTTDEKYMSRCIQLARNGFYGAAPNPMVGAVIVHDGKIIGEGYHVRCGG----PHAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + E+L E +YV+LEPC CA I I R+ G +P Sbjct: 57 IRSVG---NPELLKESTIYVSLEPCSHYGKTPPCADLIVEKGIPRVVVGCMDPFAKVAGR 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF--FKERR 149 G + A E+ G+ E + + F F R Sbjct: 114 GIRKLQEAG----IEVTVGVLEAECLALNRRFMTFHTHR 148 >gi|170757063|ref|YP_001780911.1| guanine deaminase [Clostridium botulinum B1 str. Okra] gi|169122275|gb|ACA46111.1| guanine deaminase [Clostridium botulinum B1 str. Okra] Length = 157 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 33/90 (36%), Positives = 45/90 (50%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 P G+ V N ++I+ A N D TAH E+ IR C+ L+ L +LY T EP Sbjct: 23 GGPFGSAIVKNGEVIAVAHNTVVGDNDPTAHGEVNVIRKACKKLNTFDLSGCELYTTSEP 82 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C MC +AI A I ++YYG + I Sbjct: 83 CPMCMSAIIWANISKVYYGCTVEDARDIGF 112 >gi|77410804|ref|ZP_00787162.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae CJB111] gi|77163183|gb|EAO74136.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae CJB111] Length = 369 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 25/154 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M K +M+ AL+EA+ + P VGAV V +++IIS+ ++ HAE Sbjct: 1 MMKKEDYMALALKEAEKGM--GFVAPNPLVGAVIVKDDRIISKGYHKRFGDL----HAER 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 AI+ E + LYVTLEPC C A+ + I+++ G+ +P Sbjct: 55 QAIKNA-----DEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDPNPLVS 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + + GI + + + F Sbjct: 110 GKGIALLRKEGLN----VEVGILREECDALNERF 139 >gi|190347436|gb|EDK39700.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC 6260] Length = 150 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 11/147 (7%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ A+EEA+ +P+G A+ + ++ R N + T H EI + Sbjct: 4 DDEKGLAIAIEEAKKGYEEGGVPIGGALISEDGTVLGRGHNLRFQKDSATLHGEISTLEN 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R+ + +Y TL PC+MC+ A + ++R+ G N G E+ + + Sbjct: 64 AGRLKGS-VYKNCTMYTTLSPCSMCSGACIMYGVKRVVVG-ENETFMGAEDWIRKSGIEV 121 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148 + ++ Q + ++ F KER Sbjct: 122 VN--------LNNQECKDLMAKFIKER 140 >gi|319744810|gb|EFV97150.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae ATCC 13813] Length = 369 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 25/154 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M K +M+ AL+EA+ + P VGAV V +++IIS+ ++ HAE Sbjct: 1 MMKKEDYMALALKEAEKGM--GFVAPNPLVGAVIVKDDRIISKGYHKRFGDL----HAER 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 AI+ E + LYVTLEPC C A+ + I+++ G+ +P Sbjct: 55 QAIKNA-----DEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDPNPLVS 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + + GI + + + F Sbjct: 110 GKGIALLRKEGLN----VEVGILREECDALNERF 139 >gi|253578467|ref|ZP_04855739.1| riboflavin biosynthesis protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850785|gb|EES78743.1| riboflavin biosynthesis protein [Ruminococcus sp. 5_1_39BFAA] Length = 375 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 42/153 (27%), Positives = 61/153 (39%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+K +M ALE AQ VGAV V K+I + +R HAE A Sbjct: 7 MEKDRQYMKMALELAQKGMGFTAPNPMVGAVIVKRGKVIGQGYHRKYGE----PHAEREA 62 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + E +YVTLEPC C AI + IRR+ G+S+P Sbjct: 63 L-----ASCTEQPEGASIYVTLEPCCHYGKQPPCVNAILESGIRRVIIGSSDPNPLVSGK 117 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + H E+ + ++ ++ + FF Sbjct: 118 GIRILKE----HGIEVTENVLKEECDKLNEAFF 146 >gi|77413098|ref|ZP_00789299.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae 515] gi|77160891|gb|EAO72001.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae 515] Length = 369 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 25/154 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M K +M+ AL+EA+ + P VGAV V +++IIS+ ++ HAE Sbjct: 1 MMKKEDYMALALKEAEKGM--GFVAPNPLVGAVIVKDDRIISKGYHKRFGDL----HAER 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 AI+ E + LYVTLEPC C A+ + I+++ G+ +P Sbjct: 55 QAIKNA-----DEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDPNPLVS 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + + GI + + + F Sbjct: 110 GKGIALLRKEGLN----VEVGILREECDALNERF 139 >gi|317494530|ref|ZP_07952943.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917460|gb|EFV38806.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 152 Score = 126 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 32/107 (29%), Positives = 51/107 (47%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + ++ AL A + + P GAV V N ++++ A N D TAHAE+ IR Sbjct: 1 MSSHDEYLQRALALAAESVEQGGRPFGAVIVRNGEVVAEAVNTIHLNGDPTAHAELNGIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 L E +Y + +PC MC +A+ L ++ +Y+ N G Sbjct: 61 DVSTRHGSTALRECVVYASGQPCPMCLSAMYLTGVQAVYFANGNQDG 107 >gi|195952880|ref|YP_002121170.1| riboflavin biosynthesis protein RibD [Hydrogenobaculum sp. Y04AAS1] gi|195932492|gb|ACG57192.1| riboflavin biosynthesis protein RibD [Hydrogenobaculum sp. Y04AAS1] Length = 357 Score = 126 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + K +M ALEEA VG + V ++KI+S + K T HAEI+A Sbjct: 2 INKDKYYMKLALEEAYKYKGQTHPNPAVGVLIVKDDKILSIGAH----KKAGTDHAEIVA 57 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++ QE + +YVTLEPC C AI + I+++ G+ +P Sbjct: 58 LKNA-----QEDVKGATMYVTLEPCSFHGKTPPCCPAIISSGIKKVVIGSVDPNPKVSGK 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G ++ A E+ G+ ++ ++ +DFF Sbjct: 113 GIEWLKSAG----IEVEVGVLKEECDKLNEDFF 141 >gi|22536910|ref|NP_687761.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae 2603V/R] gi|76788660|ref|YP_329494.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae A909] gi|77406006|ref|ZP_00783084.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae H36B] gi|22533761|gb|AAM99633.1|AE014225_16 riboflavin biosynthesis protein RibD [Streptococcus agalactiae 2603V/R] gi|76563717|gb|ABA46301.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae A909] gi|77175401|gb|EAO78192.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae H36B] Length = 369 Score = 126 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 25/154 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M K +M+ AL+EA+ + P VGAV V +++IIS+ ++ HAE Sbjct: 1 MMKKEDYMALALKEAEKGM--GFVAPNPLVGAVIVKDDRIISKGYHKRFGDL----HAER 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 AI+ E + LYVTLEPC C A+ + I+++ G+ +P Sbjct: 55 QAIKNA-----DEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDPNPLVS 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + + GI + + + F Sbjct: 110 GKGIALLRKEGLN----VEVGILREECDALNERF 139 >gi|332666596|ref|YP_004449384.1| CMP/dCMP deaminase zinc-binding protein [Haliscomenobacter hydrossis DSM 1100] gi|332335410|gb|AEE52511.1| CMP/dCMP deaminase zinc-binding protein [Haliscomenobacter hydrossis DSM 1100] Length = 137 Score = 126 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 49/132 (37%), Positives = 62/132 (46%), Gaps = 4/132 (3%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 F+ C E A +A PVGAV + + II+ R DVT HAEI AIR Sbjct: 7 HPFFLRC-HELAATSAELGNPPVGAVLIRDGLIIAEGLELARSSGDVTRHAEIEAIRAAV 65 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 IL L + +L T EPC MCA AI RIRR+ Y + P GG+ + + T Sbjct: 66 HILKTSDLSDCELITTHEPCVMCAYAIRHYRIRRVVYELAVPTVGGVSSKFPVLSDPTFW 125 Query: 124 ---HSPEIYPGI 132 PEI+ G Sbjct: 126 EARPVPEIHLGF 137 >gi|145229091|ref|XP_001388854.1| cytosine deaminase [Aspergillus niger CBS 513.88] gi|134054953|emb|CAK36962.1| unnamed protein product [Aspergillus niger] Length = 148 Score = 126 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 14/150 (9%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M+ F+ A+EEA+ A +P+GA V + KI+ R N + HAE+ A+ Sbjct: 1 METDPGFI-AAVEEAKQGAAEGGVPIGACLVSKDGKILGRGHNMRVQKGSPVLHAEMSAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R+ + +Y TL PC MC A L +++R+ G + GG + Sbjct: 60 ENSGRLPASAY-EGATMYTTLSPCDMCTGACILYKVKRVVVGENKSFMGGEDYLKS---- 114 Query: 120 ATCHHSPEIYPGISEQ-RSRQIIQDFFKER 148 E+ + + +Q+++ F KE+ Sbjct: 115 ----RGKEVV--VLDNAECKQLMEKFMKEK 138 >gi|320592583|gb|EFX05013.1| tRNA-specific adenosine deaminase [Grosmannia clavigera kw1407] Length = 684 Score = 126 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 67/177 (37%), Gaps = 57/177 (32%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI---- 59 +M+ A+ AQ A NE PVG V V N ++I++ N ++ T HAE++ + Sbjct: 314 HRGYMNEAVAMAQLALRTNETPVGCVLVHNGRVIAKGMNATNMTRNGTRHAELMCLNALL 373 Query: 60 ----------------------------------RMGCRILSQ----------------- 68 R R+ Sbjct: 374 AQWDDVSDVDSRRADDSDCDSAQDYDNDTDEFTDRDWARVNPSKGHLFPYGQKLHPARVV 433 Query: 69 --EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 +I+ LYVT+EPC MCA+ + I+++Y+GA+N K GG + + + + Sbjct: 434 NPDIVRGCSLYVTVEPCIMCASMLRQYGIKKVYFGAANDKFGGTGGVLRIHMNSKPN 490 >gi|134094122|ref|YP_001099197.1| putative guanine deaminase [Herminiimonas arsenicoxydans] gi|133738025|emb|CAL61070.1| putative Guanine deaminase (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) [Herminiimonas arsenicoxydans] Length = 153 Score = 126 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 47/107 (43%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + A+ A+N + P GAV ++ +II+ N D T HAE+ +R Sbjct: 1 MSDHAKLLGEAVRLAKNNHQQGGRPFGAVLTMDGEIIATGVNNIVHSHDPTTHAEMETLR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 + L + L +Y + PC MC AA+ L + +YY N Sbjct: 61 AASQRLGRPNLKGSVVYASGHPCPMCLAALVLTGVDAVYYAFDNQDA 107 >gi|332799789|ref|YP_004461288.1| riboflavin biosynthesis protein RibD [Tepidanaerobacter sp. Re1] gi|332697524|gb|AEE91981.1| riboflavin biosynthesis protein RibD [Tepidanaerobacter sp. Re1] Length = 361 Score = 126 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 60/155 (38%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ FM ALE A+ E P VGAV V + KI+ ++ HAEI A Sbjct: 1 METDEYFMQRALELAEKGRKTTGENPMVGAVIVKDGKIVGEGYHKKAGG----PHAEIEA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++ +YV LEPC C A+ A+I R+ +P Sbjct: 57 LKEAGL-----NAKGATIYVNLEPCCHYGKTPPCTEALIKAQIARVVAAIEDPNSKVAGK 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G + E+ G+ + ++ ++ + F K Sbjct: 112 GFSQLQ----NAGIEVSVGVLKNKASKLNEVFIKN 142 >gi|294675036|ref|YP_003575652.1| riboflavin biosynthesis protein RibD [Prevotella ruminicola 23] gi|294472928|gb|ADE82317.1| riboflavin biosynthesis protein RibD [Prevotella ruminicola 23] Length = 307 Score = 126 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 46/160 (28%), Positives = 66/160 (41%), Gaps = 20/160 (12%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M FM ++ A+N L VGAV V N +II + L AHAE+ A Sbjct: 1 MIDDKKFMQRCIQLAKNGQLNAKPNPMVGAVIVHNGRIIGEGYHVRCGL----AHAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 R + +LPE +YV+LEPC CA I +RR+ G + Sbjct: 57 F-ASVRAEDEALLPESTIYVSLEPCSHYGKTPPCADLIIEKGVRRVVVGCIDEFAEVQGR 115 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 G Q A E+ G+ E + + + FF +E+R Sbjct: 116 GIQKLRDAG----IEVEVGVLEDECKALNRRFFTFHREKR 151 >gi|302529650|ref|ZP_07281992.1| guanine deaminase [Streptomyces sp. AA4] gi|302438545|gb|EFL10361.1| guanine deaminase [Streptomyces sp. AA4] Length = 162 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 48/95 (50%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +++ + A+ P GA+ V + +I++ NR D TAHAE++AIR C+ Sbjct: 12 AWLAECVRIAEKNVADGGGPFGALVVKDGEIVATGVNRVTPSLDPTAHAEVVAIRAACQA 71 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L L L + EPC MC A+ AR+ R+ Y Sbjct: 72 LGTFSLAGCVLVSSCEPCPMCLASSLWARVDRVLY 106 >gi|330991695|ref|ZP_08315645.1| putative cytosine deaminase [Gluconacetobacter sp. SXCC-1] gi|329761163|gb|EGG77657.1| putative cytosine deaminase [Gluconacetobacter sp. SXCC-1] Length = 280 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 57/158 (36%), Gaps = 15/158 (9%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNR-NRELKDVTAHAEILAIR 60 F+ A A+ A + P G + V K++ GN E D+TAHAE L Sbjct: 122 DHEHFLRRAFAVAERARQGGDHPFGCILVDATGKVVLEQGNGYTAEGGDMTAHAERLLAT 181 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L +Y + EPC MCA A+ A I R+ YG S + Sbjct: 182 RASKRFPPAELAGCTMYTSAEPCAMCAGAVYWAGIGRVVYGQSEHDLKAMTG--NHPENP 239 Query: 121 TCH-----------HSPEIYPGISEQRSRQIIQDFFKE 147 T + + E + ++ + F+ E Sbjct: 240 TLDLPCRTVFDAGQRRVAVIGPLLEAEAAELQRSFWAE 277 >gi|332974309|gb|EGK11241.1| guanine deaminase [Desmospora sp. 8437] Length = 146 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 3/99 (3%) Query: 7 FMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M A++ A + R E P GAV V ++I+ N +++D TAHAEI AIR CR Sbjct: 6 WMQQAMDLAAENVSRHRGE-PFGAVIVREGEVIATGVNETGKIQDPTAHAEIQAIREACR 64 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L + +L + +++ + EPC+MC AI A R +++ A+ Sbjct: 65 KLGKTVLDDCEMFASGEPCSMCMGAIQWAGFRAVWFAAA 103 >gi|326315881|ref|YP_004233553.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372717|gb|ADX44986.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 169 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 1/101 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ ++ A+ A A R P GAV V + +++ A N N E D TAHAE AIR Sbjct: 14 ERDGRYLRQAIALADKARARGNRPFGAVIVGDDGTVLAEAWNANGETGDCTAHAETSAIR 73 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + ++E+L LY + EPC MCA AI A I R+ YG Sbjct: 74 VASPRHAREVLARATLYSSGEPCVMCAGAIFWANIGRVVYG 114 >gi|332705458|ref|ZP_08425536.1| cytosine/adenosine deaminase [Lyngbya majuscula 3L] gi|332355818|gb|EGJ35280.1| cytosine/adenosine deaminase [Lyngbya majuscula 3L] Length = 147 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 10/137 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A +EAQ IP+G+V V +I+ R NR + H E+ A+ + Sbjct: 1 MLAAFKEAQMGFQEGGIPIGSVVVKGGEIVGRGHNRRVQKGSAILHGEMDALEDVGSQPA 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 +V LY TL PC+MC AI L +I + G EN T Sbjct: 61 SFY-QDVVLYTTLSPCSMCTGAILLYKIPHVVIG---------ENKTFLGEEELLRSRGV 110 Query: 128 IYPGISEQRSRQIIQDF 144 I +++ Q++QDF Sbjct: 111 IVEVLNDDSCYQLMQDF 127 >gi|332881258|ref|ZP_08448908.1| riboflavin biosynthesis protein RibD [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680634|gb|EGJ53581.1| riboflavin biosynthesis protein RibD [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 358 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M +MS ++ A+N P VGAV V + KII + HAE+ Sbjct: 1 MTTDEKYMSRCIQLARNGF-YGAAPNPMVGAVIVHDGKIIGEGYHVRCGG----PHAEVN 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AIR + + E+L E +YV+LEPC CA I I R+ G +P Sbjct: 56 AIR---FVRNPELLKESTIYVSLEPCSHYGKTPPCADLIVEKGIPRVVVGCMDPFAKVAG 112 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + + E+ G+ E + + F Sbjct: 113 RGIRKLQESG----IEVTVGVLEAECLALNRRF 141 >gi|323702710|ref|ZP_08114371.1| riboflavin biosynthesis protein RibD [Desulfotomaculum nigrificans DSM 574] gi|323532373|gb|EGB22251.1| riboflavin biosynthesis protein RibD [Desulfotomaculum nigrificans DSM 574] Length = 375 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 21/154 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + FM ALE A+ A R P VGAV V + +++ + + K TAHAE++A Sbjct: 1 MDQDKHFMQMALELARKARGRTSPNPMVGAVVVKDGQVVGQGWHA----KAGTAHAEVVA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 + E +YVTLEPC C A+ A ++R+ ++P Sbjct: 57 LADAG-----EQARGATVYVTLEPCCHHGRTGPCTEALLKAGVKRVVAAMTDPNPLVAGK 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G A E+ G+ E +RQ+ + F K Sbjct: 112 GLAILRDAG----VEVQVGVLESEARQLNEIFIK 141 >gi|254567633|ref|XP_002490927.1| Cytosine deaminase, zinc metalloenzyme that catalyzes the hydrolytic deamination of cytosine to urac [Pichia pastoris GS115] gi|238030724|emb|CAY68647.1| Cytosine deaminase, zinc metalloenzyme that catalyzes the hydrolytic deamination of cytosine to urac [Pichia pastoris GS115] gi|328352537|emb|CCA38936.1| cytosine deaminase [Pichia pastoris CBS 7435] Length = 150 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 11/141 (7%) Query: 9 SCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 AL+EAQ IP+GA V + ++ N + HAE+ A+ R+ Sbjct: 10 KLALKEAQKGYEDGGIPIGAALVSEDGTVLGVGHNLRIQKGSSVFHAEMSALENAGRLPG 69 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + +Y TL PC MC+ A + I+R+ G N G E + + + Sbjct: 70 KTY-KNCTMYTTLSPCHMCSGACLMYGIKRVVLG-ENETFQGAEELLRSKGVEVVNAK-- 125 Query: 128 IYPGISEQRSRQIIQDFFKER 148 +++I F KER Sbjct: 126 ------NDECKELISKFIKER 140 >gi|255035691|ref|YP_003086312.1| CMP/dCMP deaminase zinc-binding [Dyadobacter fermentans DSM 18053] gi|254948447|gb|ACT93147.1| CMP/dCMP deaminase zinc-binding [Dyadobacter fermentans DSM 18053] Length = 140 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 53/122 (43%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + + F+ E A A PVGAV V I+ R D+T HAE+ AIR Sbjct: 1 MDEHHKFLQRCHELALQAGRSGNTPVGAVIVREGVIVGEGIEATRPDNDITRHAEVEAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + L +Y T EPC +C+ AI +I + + + P GG+ + T A Sbjct: 61 DALNRLGTDKLTGCAMYTTHEPCILCSYAIRHYQISWVGFEHAVPAVGGVSSPWPILTAA 120 Query: 121 TC 122 Sbjct: 121 DI 122 >gi|25010822|ref|NP_735217.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae NEM316] gi|23095201|emb|CAD46411.1| Unknown [Streptococcus agalactiae NEM316] Length = 369 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 25/154 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M K +M+ AL+EA+ + P VGAV V +++IIS+ ++ HAE Sbjct: 1 MMKKEDYMALALKEAEKGM--GFVAPNPLVGAVIVKDDRIISKGYHKRFGDL----HAER 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 AI+ E + LYVTLEPC C A+ + I+++ G+ +P Sbjct: 55 QAIKNA-----DEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDPNPLVS 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + + GI + + + F Sbjct: 110 GKGIALLRKECLN----VEVGILREECDALNERF 139 >gi|116694743|ref|YP_728954.1| cytosine deaminase-related enzyme [Ralstonia eutropha H16] gi|113529242|emb|CAJ95589.1| cytosine deaminase-related enzyme [Ralstonia eutropha H16] Length = 155 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 1/108 (0%) Query: 1 MKKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M ++ ++ A +N RN P GAV V + ++++RA N+ D +AHAE+ A+ Sbjct: 1 MSTTEAYLLDSIRLAMENVRERNTWPFGAVVVRDGEVLARAVNQVDATCDPSAHAEMQAV 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 R R L + L +Y + PC+MC +A+ LA ++ +YY SN G Sbjct: 61 RAASRALGKPDLSGCTVYASGYPCSMCLSAMYLAGVKAVYYAYSNEDG 108 >gi|152981801|ref|YP_001353377.1| hypothetical protein mma_1687 [Janthinobacterium sp. Marseille] gi|151281878|gb|ABR90288.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 150 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 47/106 (44%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ A+ AQ+ R P GAV + + I+ N D T HAE+ AIR+ Sbjct: 3 SNHEKFLREAVRLAQDNKARGGRPFGAVLAVGGESIAIGVNNIVHSNDPTTHAEMEAIRV 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 + L + L +Y + PC MC AA+ L + +YY N Sbjct: 63 ASQKLGRPNLKGSVIYASGHPCPMCLAAMLLTGVDEVYYAFDNNDA 108 >gi|254433467|ref|ZP_05046975.1| hypothetical protein NOC27_398 [Nitrosococcus oceani AFC27] gi|207089800|gb|EDZ67071.1| hypothetical protein NOC27_398 [Nitrosococcus oceani AFC27] Length = 93 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 8 MSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ A+ A P GAV V + +I+ RA N L+D TAHAE+ AIRM CR Sbjct: 1 MAEAISLASEGMADGLGGPFGAVVVRDGEILGRACNDVIALRDPTAHAEVQAIRMACRNF 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 + L LY + EPC MC A ARI +Y Sbjct: 61 NDFHLEGCALYCSCEPCPMCLGAAYWARIGWIY 93 >gi|87131002|gb|ABD24095.1| cytosine deaminase [Clavispora lusitaniae] Length = 153 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 11/147 (7%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M A EEAQ IP+G A+ + I+ R N + T H EI + Sbjct: 4 DDKLGMQIAFEEAQKGYAEGGIPIGGALIHEDGTILGRGHNMRIQKNSATLHGEISTLEN 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R+ + +Y TL PC MC+ A + ++R+ G N G E + + Sbjct: 64 AGRLPGG-VYKNCTMYTTLSPCHMCSGACLMYGVKRVVLG-ENENFVGAEKLLESMGVEV 121 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148 + +++++ ++++ F +ER Sbjct: 122 VN--------MNDEKCKELMSRFIRER 140 >gi|168178781|ref|ZP_02613445.1| guanine deaminase [Clostridium botulinum NCTC 2916] gi|182671437|gb|EDT83411.1| guanine deaminase [Clostridium botulinum NCTC 2916] Length = 157 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 2/113 (1%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M K + M ++ +E P G+ V ++I+ A N D TAH E+ I Sbjct: 1 MDKNEI-MDLCVKSCMEGMKNHEGGPFGSAIVKAGQVIAVAHNTVVGDNDPTAHGEVNVI 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 R C+ L+ L +LY T EPC MC +AI A I ++YYG + I Sbjct: 60 RKACKKLNTFDLSGCELYTTSEPCPMCMSAIIWANISKVYYGCTVEDARDIGF 112 >gi|299147398|ref|ZP_07040463.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_23] gi|298514676|gb|EFI38560.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_23] Length = 351 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 24/154 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M++ +M +E A+N +P VGAV V N +II + AHAE+ Sbjct: 7 MEE-EKYMRRCIELAKNGLC--NVPPNPTVGAVIVCNGRIIGEGYHIRCGE----AHAEV 59 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 AIR + + +L +YV+LEPC CA I +I R+ G +P Sbjct: 60 NAIRS---VKDESLLKHSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVT 116 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ GI E+ + +I+ F Sbjct: 117 GRGIQKLRDAGR----EVTVGILEKECQSLIRRF 146 >gi|303231427|ref|ZP_07318158.1| riboflavin biosynthesis protein RibD [Veillonella atypica ACS-049-V-Sch6] gi|302513864|gb|EFL55875.1| riboflavin biosynthesis protein RibD [Veillonella atypica ACS-049-V-Sch6] Length = 406 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 59/153 (38%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M ++M A+ A+ A P VGAV V NN I+ + AHAE+ A Sbjct: 1 MMNDELYMKRAISLAKMATGHTSPNPLVGAVVVKNNTIVGEGYHHKAGE----AHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + LYVTLEPC CA + + I R+ G+++P Sbjct: 57 LDAAG-----YNARGATLYVTLEPCAHYGKTPPCAKRVVESGIARVVIGSTDPNPLVAGK 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G Q T A E+ + Q+ + FF Sbjct: 112 GIQILTEAG----IEVTTDVCVDECIQLNEHFF 140 >gi|156040950|ref|XP_001587461.1| hypothetical protein SS1G_11453 [Sclerotinia sclerotiorum 1980] gi|154695837|gb|EDN95575.1| hypothetical protein SS1G_11453 [Sclerotinia sclerotiorum 1980 UF-70] Length = 245 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 72/219 (32%), Gaps = 74/219 (33%) Query: 1 MKKGN-----VFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAH 53 M K FM AL A A NE PVG V V K+++R N + T H Sbjct: 19 MTKDEINTHIFFMGEALAMANLALNTNETPVGCVLVDPVLKKVVARGMNATNRSYNGTRH 78 Query: 54 AEILAI------------------RMG----------------------CRILSQEILPE 73 AE +AI R R E + Sbjct: 79 AEFIAIDELLSSSLRSDCGSADETREAKRKREENGSEADHGQGGGSEISGRGYGPENMKN 138 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS-------- 125 +DLYVT+EPC MCA+ + IR+++YGA N K GG + S Sbjct: 139 LDLYVTIEPCIMCASLLQQFGIRKVWYGAVNDKFGGNGGVLNIHISNGKFDSNETAEDRE 198 Query: 126 -------------------PEIYPGISEQRSRQIIQDFF 145 E+ G + + I++ F+ Sbjct: 199 GDIMEETGGGKRTQKQEGDYEVSGGWLREEAIVILRRFY 237 >gi|296130628|ref|YP_003637878.1| Guanine deaminase [Cellulomonas flavigena DSM 20109] gi|296022443|gb|ADG75679.1| Guanine deaminase [Cellulomonas flavigena DSM 20109] Length = 186 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 2/110 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +++ A+E A P GAV V + ++ NR D TAHAE+ AIR C Sbjct: 33 DARWLARAVELATANVHDGGGPFGAVVVADGVEVAVGQNRVTRDLDPTAHAEVQAIRAAC 92 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--NPKGGGIE 111 R L + LY + EPC +C AA AR+ R+ + A + GG + Sbjct: 93 RAADTFALDGMTLYTSCEPCPLCLAACLWARLDRVVFSADRHDASRGGFD 142 >gi|114770250|ref|ZP_01447788.1| cytosine deaminase [alpha proteobacterium HTCC2255] gi|114549087|gb|EAU51970.1| cytosine deaminase [alpha proteobacterium HTCC2255] Length = 147 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 15/150 (10%) Query: 1 MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M + + A EA+ P+G+V +I+S+ N+ + D AH E+ A+ Sbjct: 1 MNDDDKRLLRIAYNEAKLGFEEGGCPIGSVLARGAEIVSQGRNQRVQKGDPIAHGEMDAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R R Q+ + LY +L PC MC I I R+ G N GG E +F Sbjct: 61 RKAGR---QKTYRDTTLYTSLSPCMMCTGTILQFGIPRVVIG-ENKNFGGNE---EFLRS 113 Query: 120 ATCHHSPEIYPGISEQR-SRQIIQDFFKER 148 E+ I+ +++ F E+ Sbjct: 114 KG----VEVL--IANDEDCIELMTKFINEK 137 >gi|222111201|ref|YP_002553465.1| cmp/dcmp deaminase zinc-binding [Acidovorax ebreus TPSY] gi|221730645|gb|ACM33465.1| CMP/dCMP deaminase zinc-binding [Acidovorax ebreus TPSY] Length = 155 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 45/107 (42%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + A+ A + R P GAV ++I+ N D + HAE+ A+R Sbjct: 1 MSTDTALLRRAVHLAHDNRARGGRPFGAVIARGGEVIATGVNDIVHSHDPSTHAEMQALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 R + L +Y + PC MC AA+ +A R++Y N Sbjct: 61 AATRQRANPSLAGCTVYASGHPCPMCLAALVMAGADRVFYAFDNRDA 107 >gi|114775692|ref|ZP_01451260.1| cytosine deaminase [Mariprofundus ferrooxydans PV-1] gi|114553803|gb|EAU56184.1| cytosine deaminase [Mariprofundus ferrooxydans PV-1] Length = 145 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 10/143 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ A++EA+ IP+G+V V++ +I+ R NR + HAE+ + R Sbjct: 2 DKFLRAAIDEARQGMAEGGIPIGSVLVIDGEIVGRGHNRRVQQGSAVLHAEMDCLEQAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + + LY TL PC MC+ A+ L I R+ G ++ G Sbjct: 62 LTAADY-RRATLYSTLSPCDMCSGAVLLYGIPRVVVGENSTFQGPEGYVRSRGVEVVVV- 119 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 + R+++ F Sbjct: 120 --------DDAECRELMAQFIAA 134 >gi|255941100|ref|XP_002561319.1| Pc16g10090 [Penicillium chrysogenum Wisconsin 54-1255] gi|211585942|emb|CAP93679.1| Pc16g10090 [Penicillium chrysogenum Wisconsin 54-1255] Length = 148 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 14/150 (9%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M++ F+ A+EEA+ +P+GA V + KI+ R N + HAE+ A+ Sbjct: 1 MEQDPGFI-AAVEEAKQGLSEGGVPIGAALVSKDGKILGRGHNMRVQKGSAVLHAEMSAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R+ + +Y TL PC MC A L +++R+ G + GG Sbjct: 60 ENSGRLPASAY-EGATMYTTLSPCDMCTGACILYKVKRVVIGENKNFMGG--------EE 110 Query: 120 ATCHHSPEIYPGISEQ-RSRQIIQDFFKER 148 + E+ + + ++ + F KE+ Sbjct: 111 LLLNKGKEVV--VLDNAECKEFMTKFMKEK 138 >gi|18976434|ref|NP_577791.1| riboflavin-specific deaminase [Pyrococcus furiosus DSM 3638] gi|18891968|gb|AAL80186.1| riboflavin-specific deaminase [Pyrococcus furiosus DSM 3638] Length = 354 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 44/150 (29%), Positives = 61/150 (40%), Gaps = 18/150 (12%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM AL A+ L N P VGAV V +NKII ++ K HAE+ AI Sbjct: 2 SDEKFMKLALRLARKGEGLTNPNPMVGAVLVKDNKIIGTGWHKRFGDK----HAEVNAIE 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 R + LYVTLEPC CA I I R+ +P G Sbjct: 58 DAKRK--GYTIEGATLYVTLEPCSHWGKQPPCADRIIEEGISRVVIAMVDPNPLVSGRGI 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ E+ ++++ + F Sbjct: 116 KKLKEAG----VEVKVGVLEEEAKKLNEIF 141 >gi|213409075|ref|XP_002175308.1| tRNA-specific adenosine deaminase subunit tad2 [Schizosaccharomyces japonicus yFS275] gi|212003355|gb|EEB09015.1| tRNA-specific adenosine deaminase subunit tad2 [Schizosaccharomyces japonicus yFS275] Length = 365 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 24/142 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + FM AL A+ A NE+P HAE++A+ Sbjct: 217 HHQFMKEALNMAELALKWNEVP------------------------GIQHAELVAVEDIL 252 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + I EV LYVT+EPC MCAAA+ I+ +Y+G N + GG + + Sbjct: 253 KRYPPSIFEEVTLYVTVEPCLMCAAALKQLHIKEVYFGCGNDRFGGCGSVFSINKDPSVD 312 Query: 124 HSPEIYPGISEQRSRQIIQDFF 145 +YPG+ + +++ F+ Sbjct: 313 PPYPVYPGLYRAEAIMLMRQFY 334 >gi|163852551|ref|YP_001640594.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1] gi|163664156|gb|ABY31523.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1] Length = 153 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 33/99 (33%), Positives = 51/99 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M ++ A E A P GAV V + ++I+RA NR D + HAE++AIR Sbjct: 1 MPDHESYLREATELALANVAEGGRPYGAVIVRDGEVIARAANRIHATNDPSDHAEMVAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 + L + L + +Y + PC MC AA+ LA +++ Y Sbjct: 61 AASQQLGRPKLDDCIVYASGRPCPMCHAAMRLAGVKQGY 99 >gi|228953373|ref|ZP_04115419.1| Cytosine deaminase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229080221|ref|ZP_04212748.1| Cytosine deaminase [Bacillus cereus Rock4-2] gi|229191139|ref|ZP_04318128.1| Cytosine deaminase [Bacillus cereus ATCC 10876] gi|228592289|gb|EEK50119.1| Cytosine deaminase [Bacillus cereus ATCC 10876] gi|228703116|gb|EEL55575.1| Cytosine deaminase [Bacillus cereus Rock4-2] gi|228806270|gb|EEM52843.1| Cytosine deaminase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 158 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 7/142 (4%) Query: 10 CALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 ALEEA+ A N PVGAV V NN +I+R NR KD+TAHAEI AIR + Sbjct: 1 MALEEAEKALKENTYPVGAVIVDGNNNVIARGRNRVHPQKDITAHAEIDAIRNAGEAMFD 60 Query: 69 EILPE--VDLYVTLEPCTMCAAAISLARIRRLYYGASNP-KGGGIENGTQFYTLATCHHS 125 + +Y TLEPC MC I A+I+R+ + ++ GG + + Sbjct: 61 AKIKNEKFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFGGYKKIKNALVFEGKFNK 120 Query: 126 PEIYPGISEQ---RSRQIIQDF 144 +I E R +++++ + Sbjct: 121 IDIVEEPFEDLKTRQKELMRQW 142 >gi|189462016|ref|ZP_03010801.1| hypothetical protein BACCOP_02688 [Bacteroides coprocola DSM 17136] gi|189431230|gb|EDV00215.1| hypothetical protein BACCOP_02688 [Bacteroides coprocola DSM 17136] Length = 344 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 62/152 (40%), Gaps = 19/152 (12%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K ++ ++ A+N VGAV V N++II + HAE+ A Sbjct: 1 MTKDEKYIRRCIQLARNGMCNAAPNPMVGAVIVCNDRIIGEGYHVRCGEG----HAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + + +L + +YV+LEPC CA I I R+ G +P Sbjct: 57 IRS---VKDESLLKKSTIYVSLEPCSHYGKTPPCADLIISKGIPRVVVGCVDPFSLVSGR 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ E R +I+ F Sbjct: 114 GIQKLRDAG----IEVTVGVLENECRALIKRF 141 >gi|257455158|ref|ZP_05620396.1| riboflavin biosynthesis protein RibD [Enhydrobacter aerosaccus SK60] gi|257447491|gb|EEV22496.1| riboflavin biosynthesis protein RibD [Enhydrobacter aerosaccus SK60] Length = 359 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 45/155 (29%), Positives = 64/155 (41%), Gaps = 17/155 (10%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +MS A+E A+ R VG V V +N+II + + HAE+ A+R Sbjct: 12 QHQYYMSRAIELAKKGRFTTRPNPSVGCVIVKDNQIIGEGFH--YQAGQP--HAEVFALR 67 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + + L YVTLEPC CA A+ A I R+ +P G Sbjct: 68 QAYERDA-KHLQGAIAYVTLEPCSHHGRTPPCADALIQAGISRVVIAVVDPNPKVDGGGI 126 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ GI EQ + Q+ + FFK R Sbjct: 127 AKLQQAG----IEVITGICEQAAYQLNEGFFKVMR 157 >gi|281491487|ref|YP_003353467.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/ 5-amino-6-(5-phosphoribosylamino)uracil reductase [Lactococcus lactis subsp. lactis KF147] gi|281375205|gb|ADA64718.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase/ 5-amino-6-(5-phosphoribosylamino)uracil reductase [Lactococcus lactis subsp. lactis KF147] Length = 362 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 42/155 (27%), Positives = 60/155 (38%), Gaps = 25/155 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 MKK +M A+ A+ + P VGA+ V +II + + AHAEI Sbjct: 1 MKKDEYYMDLAIVLAKKGG--GNVNPNPQVGALIVKEGRIIGQGYHEKYGE----AHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A E LYVTLEPC C AI RI+R+ G +P Sbjct: 55 NAF-----KDCNESPEGATLYVTLEPCAHQGKQPPCFEAIIKNRIKRVVIGHLDPNPLVS 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A E+ + E+ ++ + FF Sbjct: 110 GKGIKAMKEAG----IEVSINVLEKECEELNKIFF 140 >gi|183597629|ref|ZP_02959122.1| hypothetical protein PROSTU_00918 [Providencia stuartii ATCC 25827] gi|188022897|gb|EDU60937.1| hypothetical protein PROSTU_00918 [Providencia stuartii ATCC 25827] Length = 157 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 4/132 (3%) Query: 20 LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 + P GAV V +N+++ N D T HAE+ IR C L E LY + Sbjct: 24 KKGNEPFGAVLVKDNQVVMTGENHIHTESDPTYHAELGLIRQYCSEHKIMNLSEYTLYTS 83 Query: 80 LEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATC---HHSPEIYPGISEQ 135 EPC MC+ A+ +++ R+ Y S + + PE+ G+ ++ Sbjct: 84 CEPCCMCSGAMVWSQLGRMVYSLSHDELAEIAGFNIMLGSDEIFAKSPFKPEVTHGVLKE 143 Query: 136 RSRQIIQDFFKE 147 ++ I +F+ Sbjct: 144 KAMLIYTQYFQA 155 >gi|313675594|ref|YP_004053590.1| riboflavin biosynthesis protein ribd [Marivirga tractuosa DSM 4126] gi|312942292|gb|ADR21482.1| riboflavin biosynthesis protein RibD [Marivirga tractuosa DSM 4126] Length = 359 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 22/159 (13%) Query: 2 KKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 K+ +FM AL+ A A VG V VL+ K+I ++ HAE++AI Sbjct: 12 KQDELFMQRALQLAGYGKATASPNPMVGCVIVLDGKVIGEGWHKKAGE----PHAEVMAI 67 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + + E+L YVTLEPC CA + +++++ GA +P G Sbjct: 68 RS---VENPELLKSSTAYVTLEPCAHYGKTPPCAELLVEKQLKKVVIGAVDPNPLVAGKG 124 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 Q A E+ + EQ ++ + FF +++R Sbjct: 125 IQILKKAG----IEVESAVLEQECLEVNKAFFTYMQKKR 159 >gi|238895863|ref|YP_002920599.1| putative adenosine deaminase [Klebsiella pneumoniae NTUH-K2044] gi|238548181|dbj|BAH64532.1| putative adenosine deaminase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 154 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 34/107 (31%), Positives = 55/107 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + ++ AL A+ P GAV V N++I++ + N D TAHAE+ A+R Sbjct: 3 MSAHDRYLQRALVLAKQNIADGGRPFGAVLVRNDEIVAESVNTFHLSGDPTAHAELNAVR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 L +L E +Y + +PC MC +A+ L +R +++ SN G Sbjct: 63 DLAARLGSAVLRECVIYASGQPCPMCLSALYLTGVREVFFANSNQDG 109 >gi|300855387|ref|YP_003780371.1| riboflavin biosynthesis protein RibD [Clostridium ljungdahlii DSM 13528] gi|300435502|gb|ADK15269.1| riboflavin biosynthesis protein RibD [Clostridium ljungdahlii DSM 13528] Length = 372 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 45/155 (29%), Positives = 66/155 (42%), Gaps = 24/155 (15%) Query: 1 MKK---GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAE 55 M+K +M AL+ A + VGAV V N KII + +R AHAE Sbjct: 1 MEKENTDEKYMKEALKLALLGKGFVNPNPLVGAVIVKNGKIIGKGYHRFFGG----AHAE 56 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109 + A+R + DLYVTLEPC CA AI A I+++ G+ +P Sbjct: 57 VYALREAG-----DNAQGADLYVTLEPCSHYGKTPPCAKAIVEAGIKKVVIGSVDPNPLV 111 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + E+ G+ E+ + +I + F Sbjct: 112 SGRGVKILRDEN----IEVVTGVMEREAVKINEIF 142 >gi|319652245|ref|ZP_08006363.1| hypothetical protein HMPREF1013_02976 [Bacillus sp. 2_A_57_CT2] gi|317396068|gb|EFV76788.1| hypothetical protein HMPREF1013_02976 [Bacillus sp. 2_A_57_CT2] Length = 150 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 2/117 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + FM A+E A N P GAV V II+ N + DV+ HAE+LAIR Sbjct: 2 DHFMKRAIELAINNVKDGGQPFGAVLVKEQDIIAEGVNELHKKHDVSGHAELLAIRRAQE 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKGGGIENGTQFYTL 119 L +Y + EPC +C A+ A I ++YY + G+ Y Sbjct: 62 QFQTNDLAGFTMYASGEPCPLCLTAMYFAGIDKVYYCQSVDDAFHAGLGKSKMIYED 118 >gi|152971270|ref|YP_001336379.1| putative adenosine deaminase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|330013669|ref|ZP_08307752.1| cytidine and deoxycytidylate deaminase zinc-binding region [Klebsiella sp. MS 92-3] gi|150956119|gb|ABR78149.1| putative adenosine deaminase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|328533404|gb|EGF60142.1| cytidine and deoxycytidylate deaminase zinc-binding region [Klebsiella sp. MS 92-3] Length = 152 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 34/107 (31%), Positives = 55/107 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + ++ AL A+ P GAV V N++I++ + N D TAHAE+ A+R Sbjct: 1 MSAHDRYLQRALVLAKQNIADGGRPFGAVLVRNDEIVAESVNTFHLSGDPTAHAELNAVR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 L +L E +Y + +PC MC +A+ L +R +++ SN G Sbjct: 61 DLAARLGSAVLRECVIYASGQPCPMCLSALYLTGVREVFFANSNQDG 107 >gi|87307959|ref|ZP_01090102.1| cytosine deaminase [Blastopirellula marina DSM 3645] gi|87289573|gb|EAQ81464.1| cytosine deaminase [Blastopirellula marina DSM 3645] Length = 145 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 63/144 (43%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ A+EEA+ IP+G+V V++ ++ + NR + HAE+ + R Sbjct: 2 DEFLKLAIEEARKGLAEGGIPIGSVLVVDGQVRGQGHNRRVQKGSAILHAEMDCLEAAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L+ + LY TL PC MC+ L +I ++ G + G ++ Sbjct: 62 -LTAKDYQRAVLYSTLSPCDMCSGTALLYKIPKIVIGENQTFQG----PEEYVRSRGV-- 114 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 EI + +++++F +R Sbjct: 115 QLEI---VDSAECIELMREFIAQR 135 >gi|332982092|ref|YP_004463533.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Mahella australiensis 50-1 BON] gi|332699770|gb|AEE96711.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Mahella australiensis 50-1 BON] Length = 363 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 62/152 (40%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +FM ALE A+ N P VGAV V +II ++ HAEI A+R Sbjct: 2 QHEIFMQRALELARMGWGTTNPNPMVGAVIVKGGRIIGEGYHKKAGE----PHAEINALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E +YVTLEPC CA A+ A ++ + +P G Sbjct: 58 EAG-----EGARGSTVYVTLEPCSHFGRTPPCADALVKAGVKEVVIAMEDPNPRVAGRGI 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A ++ GI EQ +R++ + F K Sbjct: 113 NALRQAG----IKVITGIMEQEARRLNEVFIK 140 >gi|126175278|ref|YP_001051427.1| cytosine deaminase [Shewanella baltica OS155] gi|125998483|gb|ABN62558.1| Cytosine deaminase [Shewanella baltica OS155] Length = 145 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F++ A+EEA+ IP+G+V V++ KI+ R N+ + HAE+ + R Sbjct: 2 DEFLAAAIEEAKQGLAEGGIPIGSVLVIDGKIVGRGHNKRVQKGSSVLHAEMDCLENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + E LY TL PC MC+ A+ L I ++ G + G Sbjct: 62 FSAAEY-QRATLYSTLSPCDMCSGAVLLYGIPKVIVGENTTFQG--------PEAYVKSR 112 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 ++ + +Q++ DF Sbjct: 113 GVDVTV-VDNTECKQLMHDFIANH 135 >gi|329890129|ref|ZP_08268472.1| guanine deaminase [Brevundimonas diminuta ATCC 11568] gi|328845430|gb|EGF94994.1| guanine deaminase [Brevundimonas diminuta ATCC 11568] Length = 150 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 2/109 (1%) Query: 1 MKKGNV--FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + +++ A++ A P GAV V + +I+ NR D ++HAE+ A Sbjct: 1 MTEDEHRRWLTQAVDLALENVRAGGRPFGAVLVKDGALIASGVNRMLATNDPSSHAEMEA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 +R L L LY + PC MC AA + R+ +YY SN Sbjct: 61 LRQAGPALGGVDLSGAVLYASGHPCPMCLAAAVMTRVSAVYYAFSNADA 109 >gi|32475570|ref|NP_868564.1| cytosine deaminase [Rhodopirellula baltica SH 1] gi|32446112|emb|CAD75941.1| cytosine deaminase [Rhodopirellula baltica SH 1] Length = 187 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 10/143 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ AL EA+ + IP+G+V V++N+I+SR NR + HAE+ + R Sbjct: 40 DPFLQAALNEARLGLNEHGIPIGSVLVIDNEIVSRGHNRRIQNGSSILHAEMDCLERAGR 99 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + + LY TL PC MC+ A L +I R+ G + G Sbjct: 100 LTANDY-SRSTLYSTLSPCDMCSGAALLYKIPRIIVGENQTFQGPESYVRSRGVDLQI-- 156 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 +++ ++++ F + Sbjct: 157 -------VNDPDCIELMRAFIQN 172 >gi|170288788|ref|YP_001739026.1| riboflavin biosynthesis protein RibD [Thermotoga sp. RQ2] gi|170176291|gb|ACB09343.1| riboflavin biosynthesis protein RibD [Thermotoga sp. RQ2] Length = 348 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 20/149 (13%) Query: 5 NVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A+E A+ R PVGAV V + +II+ + HAE +AI Sbjct: 3 ETFMKRAIELAKKGLGRVNPNPPVGAVVVKDGRIIAEGFHPYFGG----PHAERMAIESA 58 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + E L L VTLEPC C I + I+ + G +P NG + Sbjct: 59 RKK--GEDLRGATLIVTLEPCDHHGKTPPCTDLIIESGIKTVVIGTRDPNP-VSGNGVEK 115 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + +H E+ G+ E+ +++ +FF Sbjct: 116 FR----NHGIEVIEGVLEEEVKKLC-EFF 139 >gi|15644572|ref|NP_229625.1| riboflavin-specific deaminase [Thermotoga maritima MSB8] gi|148270243|ref|YP_001244703.1| riboflavin biosynthesis protein RibD [Thermotoga petrophila RKU-1] gi|281412422|ref|YP_003346501.1| riboflavin biosynthesis protein RibD [Thermotoga naphthophila RKU-10] gi|4982410|gb|AAD36891.1|AE001819_14 riboflavin-specific deaminase [Thermotoga maritima MSB8] gi|147735787|gb|ABQ47127.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Thermotoga petrophila RKU-1] gi|281373525|gb|ADA67087.1| riboflavin biosynthesis protein RibD [Thermotoga naphthophila RKU-10] Length = 348 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 20/149 (13%) Query: 5 NVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A+E A+ R PVGAV V + +II+ + HAE +AI Sbjct: 3 ETFMKRAIELAKKGLGRVNPNPPVGAVVVKDGRIIAEGFHPYFGG----PHAERMAIESA 58 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + E L L VTLEPC C I + I+ + G +P NG + Sbjct: 59 RKK--GEDLRGATLIVTLEPCDHHGKTPPCTDLIIESGIKTVVIGTRDPNP-VSGNGVEK 115 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + +H E+ G+ E+ +++ +FF Sbjct: 116 FR----NHGIEVIEGVLEEEVKKLC-EFF 139 >gi|224536352|ref|ZP_03676891.1| hypothetical protein BACCELL_01226 [Bacteroides cellulosilyticus DSM 14838] gi|224522049|gb|EEF91154.1| hypothetical protein BACCELL_01226 [Bacteroides cellulosilyticus DSM 14838] Length = 348 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 42/150 (28%), Positives = 60/150 (40%), Gaps = 19/150 (12%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M ++ AQN VGAV V + KII + AHAE+ AIR Sbjct: 5 EEEKYMRRCIQLAQNGLCNAAPNPMVGAVIVCDGKIIGEGYHVRCGK----AHAEVNAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +L +YV+LEPC CA I +I R+ G +P G Sbjct: 61 S---VKETSLLKRSTIYVSLEPCSHHGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGRGI 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 Q A E+ G+ E R +I+ F Sbjct: 118 QKLKDAGR----EVIVGVLEDECRHLIKRF 143 >gi|73539205|ref|YP_299572.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Ralstonia eutropha JMP134] gi|72122542|gb|AAZ64728.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Ralstonia eutropha JMP134] Length = 152 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 32/107 (29%), Positives = 49/107 (45%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M M A+E A R P GAV ++ + ++ N D T HAE+ A+R Sbjct: 1 MATHEHLMREAVELAVTNLRRGGRPFGAVLAIDGEAVATGVNDIVHSHDPTTHAEMEAVR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 R L + L +Y + PC MC AA+++A ++ +YY N Sbjct: 61 AAARKLGRPDLSGSVVYASGHPCPMCLAAMTMAGVQAVYYAFDNNDA 107 >gi|322433246|ref|YP_004210467.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp. MP5ACTX9] gi|321165638|gb|ADW71340.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp. MP5ACTX9] Length = 168 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 43/146 (29%), Positives = 61/146 (41%), Gaps = 8/146 (5%) Query: 1 MK--KGNVFMSCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MK K FM+ ALE+A+ VG V V N I+ + N D TAHAE++ Sbjct: 1 MKDAKDLTFMAAALEQARIGQETPGGAQVGCVLVENGAIVCSSFNEGDLQFDPTAHAEMV 60 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 IR C+ L V +Y TL+PC MC A A + R+ YGAS + ++ + Sbjct: 61 GIRRLCKERRSISLKGVTVYCTLQPCGMCTMACLWAGVSRIVYGASRNDVNSVYFESRHF 120 Query: 118 T-----LATCHHSPEIYPGISEQRSR 138 E+ G+ Sbjct: 121 DTADFIDQAFRDDLEVKGGVLSDECA 146 >gi|33593821|ref|NP_881465.1| hypothetical protein BP2880 [Bordetella pertussis Tohama I] gi|33563894|emb|CAE43152.1| conserved hypothetical protein [Bordetella pertussis Tohama I] gi|332383223|gb|AEE68070.1| hypothetical protein BPTD_2832 [Bordetella pertussis CS] Length = 169 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 50/105 (47%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + + A+ A+ A P GA+ + +++R NR D TAH E+LA+R Sbjct: 15 DDDALLREAIALARANARAGGRPFGALVAKDGVVLARGVNRMLADHDPTAHTELLALREA 74 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 R L L +Y + +PC MC AA+ ++ + R Y SN + Sbjct: 75 GRALRSARLDGCVVYASGQPCPMCLAAMRMSGVARAVYAYSNEQA 119 >gi|302875673|ref|YP_003844306.1| riboflavin biosynthesis protein RibD [Clostridium cellulovorans 743B] gi|307688111|ref|ZP_07630557.1| riboflavin biosynthesis protein RibD [Clostridium cellulovorans 743B] gi|302578530|gb|ADL52542.1| riboflavin biosynthesis protein RibD [Clostridium cellulovorans 743B] Length = 364 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 60/153 (39%), Gaps = 23/153 (15%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M ALE A+ A + P VGAV V N +II ++ HAE+ AI Sbjct: 2 NESYMRRALELAKLGA--GRVSPNPMVGAVIVKNGEIIGEGYHKQYGG----PHAEVNAI 55 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + L +YVTLEPC C AI +I+ + G +P G Sbjct: 56 ---ASVSDNGELEGSTIYVTLEPCCHYGKTPPCTKAIIDNKIKTVVIGTLDPNPLVAGKG 112 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + E+ G+ E+ +I + F K Sbjct: 113 VEILRAEG----IEVIVGVLEEECLKINESFMK 141 >gi|304410115|ref|ZP_07391734.1| Cytosine deaminase [Shewanella baltica OS183] gi|307302173|ref|ZP_07581931.1| Cytosine deaminase [Shewanella baltica BA175] gi|304351524|gb|EFM15923.1| Cytosine deaminase [Shewanella baltica OS183] gi|306914211|gb|EFN44632.1| Cytosine deaminase [Shewanella baltica BA175] Length = 145 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 10/144 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F++ A+EEA+ IP+G+V V++ KI+ R N+ + HAE+ + R Sbjct: 2 DEFLAAAIEEAKQGLAEGGIPIGSVLVIDGKIVGRGHNKRVQKGSSVLHAEMDCLENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + E LY TL PC MC+ A+ L I ++ G + G Sbjct: 62 FSAAEY-QRATLYSTLSPCDMCSGAVLLYGIPKVIVGENTTFQG--------PEAYVKSR 112 Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148 ++ + +Q++ DF Sbjct: 113 GVDVTV-VDNAECKQLMHDFIANH 135 >gi|153808975|ref|ZP_01961643.1| hypothetical protein BACCAC_03276 [Bacteroides caccae ATCC 43185] gi|149128308|gb|EDM19527.1| hypothetical protein BACCAC_03276 [Bacteroides caccae ATCC 43185] Length = 348 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 20/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ +M +E A+N VGAV V + +II + AHAE+ A Sbjct: 1 MEE-EKYMRRCIELAKNGLCNAAPNPMVGAVIVCDGRIIGEGYHIRCGE----AHAEVNA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + + +L +YV+LEPC CA I +I R+ G +P Sbjct: 56 IRS---VKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSQVAGR 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ E RQ+I+ F Sbjct: 113 GIQKLKDAGR----EVIVGVLESECRQLIRRF 140 >gi|282850242|ref|ZP_06259621.1| riboflavin biosynthesis protein RibD [Veillonella parvula ATCC 17745] gi|282579735|gb|EFB85139.1| riboflavin biosynthesis protein RibD [Veillonella parvula ATCC 17745] Length = 403 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 42/151 (27%), Positives = 61/151 (40%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 V+M A+E A+ A P VGAV V +N II + K TAHAE+ A+ Sbjct: 2 DDVVYMKRAIELAKLATGHTSPNPLVGAVVVKDNTIIGEGYHH----KAGTAHAEVHALN 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + LYVTLEPC CA I A I ++ G+++P G Sbjct: 58 QAG-----DNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGKGM 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A E+ + ++ + FF Sbjct: 113 ELLREAG----IEVVCPVCSDECAELNEHFF 139 >gi|327542899|gb|EGF29355.1| cytosine deaminase [Rhodopirellula baltica WH47] Length = 149 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 10/143 (6%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ AL+EA+ + IP+G+V V++N+I+SR NR + HAE+ + R Sbjct: 2 DPFLQAALDEARLGLNEHGIPIGSVLVIDNEIVSRGHNRRIQNGSSILHAEMDCLERAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + + LY TL PC MC+ A L +I R+ G + G Sbjct: 62 LTANDY-SRSTLYSTLSPCDMCSGAALLYKIPRIIVGENQTFQGPESYVRSRGVDLQI-- 118 Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147 +++ ++++ F + Sbjct: 119 -------VNDPDCIELMRAFIQN 134 >gi|228921710|ref|ZP_04085027.1| Cytosine deaminase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228837922|gb|EEM83246.1| Cytosine deaminase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 158 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 7/142 (4%) Query: 10 CALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 ALEEA+ A N PVGAV V NN +I+R NR KD+TAHAEI AIR + Sbjct: 1 MALEEAEKALKENTYPVGAVIVDGNNNVIARGRNRVHPQKDITAHAEIDAIRNAGEAMFD 60 Query: 69 EILPE--VDLYVTLEPCTMCAAAISLARIRRLYYGASNP-KGGGIENGTQFYTLATCHHS 125 + +Y TLEPC MC I A+I+R+ + ++ GG + + Sbjct: 61 AKIKNEKFTIYSTLEPCPMCTDGILFAKIQRVVWLLNDDLGFGGYKKIKNALVFEGKFNK 120 Query: 126 PEIYPGISEQ---RSRQIIQDF 144 +I E R R++++ + Sbjct: 121 IDIVEEPFEDLKTRQRELMRQW 142 >gi|303228926|ref|ZP_07315736.1| riboflavin biosynthesis protein RibD [Veillonella atypica ACS-134-V-Col7a] gi|302516340|gb|EFL58272.1| riboflavin biosynthesis protein RibD [Veillonella atypica ACS-134-V-Col7a] Length = 406 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 60/153 (39%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M ++M A+ A+ A P VGAV V NN I+ + AHAE+ A Sbjct: 1 MMNDELYMKRAISLAKMATGHTSPNPLVGAVVVKNNTIVGEGYHHKAGE----AHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + LYVTLEPC CA + + I R+ G+++P Sbjct: 57 LDAAG-----DNARGATLYVTLEPCAHYGKTPPCAKRVVESGIARVVIGSTDPNPLVAGK 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G Q T A E+ + Q+ + FF Sbjct: 112 GIQILTEAG----IEVTTDVCVDECIQLNEHFF 140 >gi|86749931|ref|YP_486427.1| twin-arginine translocation pathway signal [Rhodopseudomonas palustris HaA2] gi|86572959|gb|ABD07516.1| Twin-arginine translocation pathway signal [Rhodopseudomonas palustris HaA2] Length = 176 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 2/104 (1%) Query: 2 KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ M+ A+ + A + GAV V + ++++ GN D +AHAE+ AI Sbjct: 21 EQDRQHMTQAIALMRKAGVVEKTGGAFGAVIVRDGEVLAATGNSVLRDNDPSAHAEVNAI 80 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 R C+ + L +Y + E C MC A AR+ R+++ AS Sbjct: 81 RAACKKVGAPNLRGATMYTSCECCPMCYATAYWARLDRIFFAAS 124 >gi|319900207|ref|YP_004159935.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Bacteroides helcogenes P 36-108] gi|319415238|gb|ADV42349.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Bacteroides helcogenes P 36-108] Length = 347 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 45/159 (28%), Positives = 65/159 (40%), Gaps = 23/159 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 MK +M ++ AQN VGAV V + KII + + AHAE+ A Sbjct: 1 MK--EKYMRRCIQLAQNGLCNTAPNPMVGAVIVCDGKIIGEGYH----VHCGEAHAEVNA 54 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + +L +YV+LEPC CA I +I R+ G +P Sbjct: 55 IRS---VKDPSLLQRATIYVSLEPCSHYGKTPPCADLIIEKQIPRIIIGCMDPFSKVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF--FKERR 149 G Q A E+ G+ E+ + +I+ F F R Sbjct: 112 GIQKLKDAGR----EVIVGVLEEECKSLIRRFVTFHTLR 146 >gi|126699306|ref|YP_001088203.1| riboflavin biosynthesis protein [Clostridium difficile 630] gi|255100831|ref|ZP_05329808.1| riboflavin biosynthesis protein [Clostridium difficile QCD-63q42] gi|255306720|ref|ZP_05350891.1| riboflavin biosynthesis protein [Clostridium difficile ATCC 43255] gi|115250743|emb|CAJ68567.1| Riboflavin biosynthesis protein ribD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase ; 5-amino-6-(5-phosphoribosylamino)uracil reductase] [Clostridium difficile] Length = 370 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +K +M A+E A+N N P VG V V ++ II + + HAE+ AI Sbjct: 8 EKDIYYMKKAIELAKNGEGFVNPNPLVGCVIVKDSNIIGKGYHEKFGSN----HAEVNAI 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + L + LYV LEPC C I +I+R+ +P NG Sbjct: 64 NSAKQ-----SLKDSTLYVNLEPCSHYGKTPPCVDKIIQNKIKRVVISTLDPNPLVCGNG 118 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + ++ GI E +R + + FF K +R Sbjct: 119 VKKLKDNN----IDVTVGILEDEARDLNEAFFYHIKNKR 153 >gi|254975336|ref|ZP_05271808.1| riboflavin biosynthesis protein [Clostridium difficile QCD-66c26] gi|255092726|ref|ZP_05322204.1| riboflavin biosynthesis protein [Clostridium difficile CIP 107932] gi|255314465|ref|ZP_05356048.1| riboflavin biosynthesis protein [Clostridium difficile QCD-76w55] gi|255517142|ref|ZP_05384818.1| riboflavin biosynthesis protein [Clostridium difficile QCD-97b34] gi|255650247|ref|ZP_05397149.1| riboflavin biosynthesis protein [Clostridium difficile QCD-37x79] gi|260683365|ref|YP_003214650.1| riboflavin biosynthesis protein [Clostridium difficile CD196] gi|260686960|ref|YP_003218093.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Clostridium difficile R20291] gi|306520226|ref|ZP_07406573.1| riboflavin biosynthesis protein [Clostridium difficile QCD-32g58] gi|260209528|emb|CBA63111.1| riboflavin biosynthesis protein [Clostridium difficile CD196] gi|260212976|emb|CBE04276.1| riboflavin biosynthesis protein [Clostridium difficile R20291] Length = 367 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +K +M A+E A+N N P VG V V ++ II + + HAE+ AI Sbjct: 5 EKDIYYMKKAIELAKNGEGFVNPNPLVGCVIVKDSNIIGKGYHEKFGSN----HAEVNAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + L + LYV LEPC C I +I+R+ +P NG Sbjct: 61 NSAKQ-----SLKDSTLYVNLEPCSHYGKTPPCVDKIIQNKIKRVVISTLDPNPLVCGNG 115 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + ++ GI E +R + + FF K +R Sbjct: 116 VKKLKDNN----IDVTVGILEDEARDLNEAFFYHIKNKR 150 >gi|134299939|ref|YP_001113435.1| riboflavin biosynthesis protein RibD [Desulfotomaculum reducens MI-1] gi|134052639|gb|ABO50610.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Desulfotomaculum reducens MI-1] Length = 376 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + +M+ ALE A A R P VGAV V + +++ + + AHAE++A Sbjct: 1 MDQDRHYMNMALELAAKARGRTSPNPMVGAVLVKDGEVVGKGFHAKAGG----AHAEVVA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 + + +YVTLEPC C A+ A ++R+ ++P Sbjct: 57 LADAG-----DRAKGATVYVTLEPCCHHGKTGPCTEALKKAGVKRVVAAMTDPNPLVAGK 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G A E+ G+ E+ ++++ + F K Sbjct: 112 GLNILKDAG----IEVVSGLLEEEAKELNEVFIK 141 >gi|189464287|ref|ZP_03013072.1| hypothetical protein BACINT_00628 [Bacteroides intestinalis DSM 17393] gi|189438077|gb|EDV07062.1| hypothetical protein BACINT_00628 [Bacteroides intestinalis DSM 17393] Length = 345 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 45/159 (28%), Positives = 64/159 (40%), Gaps = 22/159 (13%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ +M ++ AQN VGAV V + KII + AHAE+ A Sbjct: 1 MEE-EKYMRRCIQLAQNGFCNAAPNPMVGAVIVCDGKIIGEGYHVRCGE----AHAEVNA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + +L +YV+LEPC CA I +I R+ G +P Sbjct: 56 IRS---VKDTSLLKRSTIYVSLEPCSHHGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGR 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF--FKERR 149 G Q A E+ G+ E R +I+ F F R Sbjct: 113 GIQKLKDAGR----EVTVGVLENECRHLIRRFITFHTLR 147 >gi|240139885|ref|YP_002964362.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) [Methylobacterium extorquens AM1] gi|240009859|gb|ACS41085.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) [Methylobacterium extorquens AM1] Length = 153 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 32/99 (32%), Positives = 51/99 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M ++ A E A P GAV V + ++++RA NR D + HAE++AIR Sbjct: 1 MPNHESYLREATELALANVAEGGRPYGAVIVRDGEVVARAANRIHATNDPSDHAEMVAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 + L + L + +Y + PC MC AA+ LA +++ Y Sbjct: 61 AASQQLGRPKLDDCIVYASGRPCPMCHAAMRLAGVKQGY 99 >gi|270295600|ref|ZP_06201801.1| riboflavin biosynthesis protein RibD [Bacteroides sp. D20] gi|270274847|gb|EFA20708.1| riboflavin biosynthesis protein RibD [Bacteroides sp. D20] Length = 351 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 45/158 (28%), Positives = 63/158 (39%), Gaps = 21/158 (13%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M ++ AQN VGAV V + KII + AHAE+ AI Sbjct: 3 SEEEKYMLRCIQLAQNGLCNTAPNPMVGAVIVCDGKIIGEGYHVRCGE----AHAEVNAI 58 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + +L +YV+LEPC CA I +I R+ G +P G Sbjct: 59 RS---VKDTSLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCRDPFSKVAGRG 115 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF--FKERR 149 Q A E+ G+ E RQ+I+ F F R Sbjct: 116 IQKLKDAGR----EVIVGVLETECRQLIRRFITFHTLR 149 >gi|237719659|ref|ZP_04550140.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 2_2_4] gi|229450928|gb|EEO56719.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 2_2_4] Length = 345 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 20/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ +M +E A+N VGAV V + +II + AHAE+ A Sbjct: 1 MEE-EKYMRRCIELAKNGLCNVSPNPMVGAVIVCDGRIIGEGYHIRCGE----AHAEVNA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + + +L +YV+LEPC CA I +I R+ G +P Sbjct: 56 IRS---VKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGR 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ E+ + +I+ F Sbjct: 113 GIQKLRDAGR----EVTVGVLEEECKSLIRRF 140 >gi|313203842|ref|YP_004042499.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-aminO-6-(5-phosphoribosylamino)uracil reductase [Paludibacter propionicigenes WB4] gi|312443158|gb|ADQ79514.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Paludibacter propionicigenes WB4] Length = 360 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 22/156 (14%) Query: 5 NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 ++M L+ A+ + VGAV V N+KII + AHAE AI Sbjct: 20 ELYMHRCLQLAELGVGYVAPNPMVGAVLVCNDKIIGEGYHHRYGE----AHAEPNAINSV 75 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + E+L + LYV+LEPC CA I + I R+ G +P G Sbjct: 76 KEV---ELLGQSTLYVSLEPCSHYGKTPPCADLIVSSGIPRVVIGTLDPNPKVAGKGVAK 132 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + E+ G+ E+ R++ + FF ++RR Sbjct: 133 LR----NAGVEVIVGVLEEECRELNKRFFIFQEQRR 164 >gi|294658696|ref|XP_002770827.1| DEHA2F15488p [Debaryomyces hansenii CBS767] gi|202953318|emb|CAR66350.1| DEHA2F15488p [Debaryomyces hansenii] Length = 147 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 14/147 (9%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M A EEA+ + +P+G A+ + I+ R N + T H EI + Sbjct: 4 DDKQGMKIAFEEAKK---KGGVPIGGALIHEDGTILGRGHNMRFQSSSATLHGEISTLEN 60 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R+ I + +Y TL PC MC A + I+R+ G ++ GG Sbjct: 61 AGRLKGS-IYKKCTMYTTLSPCHMCTGACIMYGIKRVVLGENDNFVGG----EDLLKQKG 115 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148 E+ ++++ + ++ F KER Sbjct: 116 ----IEVV-NLNDKDCKDLMSKFIKER 137 >gi|150865735|ref|XP_001385070.2| cytosine deaminase [Scheffersomyces stipitis CBS 6054] gi|149386991|gb|ABN67041.2| cytosine deaminase [Scheffersomyces stipitis CBS 6054] Length = 150 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 56/142 (39%), Gaps = 11/142 (7%) Query: 8 MSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALEEA+ +P+G A+ + ++ R N + H E+ + R+ Sbjct: 9 MQIALEEAKKGYEEGGVPIGGALISEDGTVLGRGHNMRFQKDSAILHGEMSVLENAGRLK 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + +Y TL PC MC+ A + I+R+ G + G Sbjct: 69 GS-VYKNCTMYTTLSPCHMCSGACLMYGIKRVVLGENVNFVGAEA----LLRSEG----V 119 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 E+ +++ + +++ F ER Sbjct: 120 EVV-NLNDPECKALMKKFIDER 140 >gi|188582573|ref|YP_001926018.1| CMP/dCMP deaminase zinc-binding [Methylobacterium populi BJ001] gi|179346071|gb|ACB81483.1| CMP/dCMP deaminase zinc-binding [Methylobacterium populi BJ001] Length = 153 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 48/96 (50%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M ++ A E A P GAV V ++++RA NR D + HAE++AIR Sbjct: 1 MPDHESYLREATELALANVAEGGRPYGAVIVREGEVVARAANRIHATNDPSDHAEMVAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96 + L + L + +Y + PC MC AA+ LA ++ Sbjct: 61 AASQRLGRPKLDDCIVYASGRPCPMCHAAMRLAGVK 96 >gi|115377134|ref|ZP_01464348.1| riboflavin biosynthesis protein RibD [Stigmatella aurantiaca DW4/3-1] gi|310822848|ref|YP_003955206.1| Riboflavin biosynthesis protein RibD [Stigmatella aurantiaca DW4/3-1] gi|115365843|gb|EAU64864.1| riboflavin biosynthesis protein RibD [Stigmatella aurantiaca DW4/3-1] gi|309395920|gb|ADO73379.1| Riboflavin biosynthesis protein RibD [Stigmatella aurantiaca DW4/3-1] Length = 387 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 49/150 (32%), Positives = 66/150 (44%), Gaps = 21/150 (14%) Query: 5 NVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM ALEEA R VGAV V +II+R + K TAHAE++A+ Sbjct: 29 EFFMRIALEEAAKGLGRTSPNPAVGAVLVKGGRIIARGYH----KKAGTAHAEVVALEAA 84 Query: 63 CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQF 116 DLY TLEPC C+ AI A +RR+ G+S+P G Sbjct: 85 G-----PRARGADLYTTLEPCDHYGRTGPCSQAIIDAGVRRVICGSSDPNPKVNGKGVAR 139 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ G+ ++ + Q+ Q FFK Sbjct: 140 LKKAG----VEVLTGVLQKDADQLNQPFFK 165 >gi|229179327|ref|ZP_04306681.1| Cytosine deaminase [Bacillus cereus 172560W] gi|228604225|gb|EEK61692.1| Cytosine deaminase [Bacillus cereus 172560W] Length = 158 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 7/142 (4%) Query: 10 CALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 ALEEA+ A N PVGAV V NN +I+R NR KD+TAHAEI AIR + Sbjct: 1 MALEEAEMALKENTYPVGAVIVDGNNNVIARGRNRVHPQKDITAHAEIDAIRNAGEAMFD 60 Query: 69 EILPE--VDLYVTLEPCTMCAAAISLARIRRLYYGASNP-KGGGIENGTQFYTLATCHHS 125 + +Y TLEPC MC I A+I+R+ + ++ GG + + Sbjct: 61 AKIKNEKFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFGGYKKIKNALVFEGKFNK 120 Query: 126 PEIYPGISEQ---RSRQIIQDF 144 +I E R +++++ + Sbjct: 121 IDIVEEPFEDLKTRQKELMRQW 142 >gi|87120113|ref|ZP_01076009.1| cytosine deaminase [Marinomonas sp. MED121] gi|86164815|gb|EAQ66084.1| cytosine deaminase [Marinomonas sp. MED121] Length = 173 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 52/102 (50%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ N ++ L +Q A P GA+ V++N++ A N D T HAE+ + Sbjct: 16 EQDNHWLKQTLNLSQAAVDAGNHPFGALLVIDNRLALEAENTVNTYNDATRHAEMNLVSQ 75 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 C+ LS+ E LY + EPC MCA AI + I+++ Y S Sbjct: 76 ACQNLSESQRKEAVLYTSTEPCAMCAGAIYWSGIKQVVYACS 117 >gi|160888034|ref|ZP_02069037.1| hypothetical protein BACUNI_00442 [Bacteroides uniformis ATCC 8492] gi|317478584|ref|ZP_07937741.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 4_1_36] gi|156862533|gb|EDO55964.1| hypothetical protein BACUNI_00442 [Bacteroides uniformis ATCC 8492] gi|316905225|gb|EFV27022.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 4_1_36] Length = 351 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 45/158 (28%), Positives = 63/158 (39%), Gaps = 21/158 (13%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M ++ AQN VGAV V + KII + AHAE+ AI Sbjct: 3 SEEEKYMLRCIQLAQNGLCNTAPNPMVGAVIVCDGKIIGEGYHVRCGE----AHAEVNAI 58 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + +L +YV+LEPC CA I +I R+ G +P G Sbjct: 59 RS---VKDTSLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCRDPFSKVAGRG 115 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF--FKERR 149 Q A E+ G+ E RQ+I+ F F R Sbjct: 116 IQKLKDAGR----EVIVGVLETECRQLIRRFITFHTLR 149 >gi|15672975|ref|NP_267149.1| riboflavin-specific deaminase [Lactococcus lactis subsp. lactis Il1403] gi|12723937|gb|AAK05091.1|AE006333_8 riboflavin-specific deaminase [Lactococcus lactis subsp. lactis Il1403] Length = 362 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 41/155 (26%), Positives = 58/155 (37%), Gaps = 25/155 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 MKK +M A+ A + P VGA+ V +II + + AHAEI Sbjct: 1 MKKDEYYMDLAIVLANKGG--GNVNPNPQVGALIVKEGRIIGQGYHEKYGK----AHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A E LYVTLEPC C AI I+R+ G +P Sbjct: 55 NAF-----KDCNESPEGATLYVTLEPCAHQGKQPPCFEAIIKNGIKRVVIGHLDPNPLVS 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A E+ + E+ ++ + FF Sbjct: 110 GKGIKAMREAG----IEVSLNVLEKECEELNKIFF 140 >gi|313889107|ref|ZP_07822763.1| riboflavin biosynthesis protein RibD [Peptoniphilus harei ACS-146-V-Sch2b] gi|312844847|gb|EFR32252.1| riboflavin biosynthesis protein RibD [Peptoniphilus harei ACS-146-V-Sch2b] Length = 371 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 21/158 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M ALE A+ + + P VG V V ++KII + + HAE+ AI Sbjct: 7 NDIFYMERALEIAREGTGKTKTNPLVGCVIVKDDKIIGQGAHLKFGEN----HAEVNAIL 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E + LYV LEPC CA I IRR+ G ++P G Sbjct: 63 DA--KSRGEDIRGATLYVNLEPCSHYGKTPPCAERIVKEGIRRVVIGTADPFEKVSGRGI 120 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A + G+ E+ + + FF K +R Sbjct: 121 KILEDAG----ISVTEGLCEEECLNLNERFFTYLKNKR 154 >gi|298482442|ref|ZP_07000628.1| riboflavin biosynthesis protein RibD [Bacteroides sp. D22] gi|298271421|gb|EFI12996.1| riboflavin biosynthesis protein RibD [Bacteroides sp. D22] Length = 351 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 20/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ +M +E A+N VGAV V N +II + AHAE+ A Sbjct: 7 MEE-EKYMRRCIELAKNGLCNVSPNPMVGAVIVCNGRIIGEGYHIRCGE----AHAEVNA 61 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + + +L +YV+LEPC CA I +I R+ G +P Sbjct: 62 IRS---VKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGR 118 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ E+ + +I+ F Sbjct: 119 GIQKLRDAGR----EVTVGVLEEECKSLIRRF 146 >gi|85001518|ref|XP_955475.1| cytidine and deoxycytidylate deaminase family protein [Theileria annulata strain Ankara] gi|65303621|emb|CAI75999.1| cytidine and deoxycytidylate deaminase family protein, putative [Theileria annulata] Length = 183 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 41/162 (25%), Positives = 63/162 (38%), Gaps = 20/162 (12%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +FM ALEEA+ A + EI V + V ++++ + N + T H E+ AI Sbjct: 11 IFMKLALEEAKKALDKEEIAVACIIVSKATREVVASSSNATNLTYNSTWHCELEAINKLI 70 Query: 64 RILSQ------------EILPEVDLYVTLEPCTMCAAAISLARIRRL-YYGASNPKGGGI 110 + E L+VT EPC MC A+ + I L YYG N K GG Sbjct: 71 DMEPNGYKSEQDSEKLREFCSGFALFVTCEPCIMCTTALQIIGIFLLMYYGCKNEKFGGC 130 Query: 111 ENGTQFYTLATCH-----HSPEIYPGISEQRSRQIIQDFFKE 147 + + G+ + S ++Q F+ Sbjct: 131 GSVLSLHLSKVIFRNGDLPRINCLGGLLSEESVNLLQTFYSR 172 >gi|260642492|ref|ZP_05859416.1| riboflavin biosynthesis protein RibD [Bacteroides finegoldii DSM 17565] gi|260621884|gb|EEX44755.1| riboflavin biosynthesis protein RibD [Bacteroides finegoldii DSM 17565] Length = 373 Score = 123 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 22/159 (13%) Query: 1 MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ +M +E A+N VGAV V + +II + AHAE+ A Sbjct: 29 MEE-EKYMRRCIELAKNGLCNVAPNPMVGAVIVCDGRIIGEGYHVRCGE----AHAEVNA 83 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + + +L +YV+LEPC CA I +I R+ G +P Sbjct: 84 IRS---VKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCRDPFSKVAGR 140 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF--FKERR 149 G Q A E+ G+ E+ +I+ F F R Sbjct: 141 GIQKLQNAGR----EVIVGVLEEECLHLIRRFITFNTLR 175 >gi|154305221|ref|XP_001553013.1| hypothetical protein BC1G_08905 [Botryotinia fuckeliana B05.10] gi|150853647|gb|EDN28839.1| hypothetical protein BC1G_08905 [Botryotinia fuckeliana B05.10] Length = 243 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 68/207 (32%), Gaps = 69/207 (33%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGC-- 63 M AL A A NE PVG V V K+++R N + T HAE +AI Sbjct: 1 MREALAMANLALSTNETPVGCVLVDPTLKKVVARGMNATNRSYNGTRHAEFIAIDELLSS 60 Query: 64 --------------------------------------RILSQEILPEVDLYVTLEPCTM 85 R E + +DLYVT+EPC M Sbjct: 61 SPKVERGDVDENRSVKRKRGESEIECHDEKVDESENSKRSYGPEDMRSLDLYVTIEPCIM 120 Query: 86 CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH--HSP----------------- 126 CA+ + IR+++YGA N K GG + H Sbjct: 121 CASLLQQFGIRKVWYGAVNDKFGGNGGVLNIHVENGKFDSHDVAEDKAKDGNDQTLDEMR 180 Query: 127 --------EIYPGISEQRSRQIIQDFF 145 E+ G + + I++ F+ Sbjct: 181 TKKHEGDYEVSGGWLREEAIVILRRFY 207 >gi|120609775|ref|YP_969453.1| CMP/dCMP deaminase [Acidovorax citrulli AAC00-1] gi|120588239|gb|ABM31679.1| CMP/dCMP deaminase, zinc-binding protein [Acidovorax citrulli AAC00-1] Length = 169 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 1/101 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ ++ A+ A A R P GAV V + +++ A N N E D TAHAE AIR Sbjct: 14 ERDGRYLRHAIALADKARARGNRPFGAVIVGGDGTVLAEAWNANGETGDCTAHAETSAIR 73 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + ++E+L LY + EPC MCA AI A I R+ YG Sbjct: 74 VASPQHAREVLARATLYSSGEPCVMCAGAIFWANIGRVVYG 114 >gi|110636628|ref|YP_676835.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Cytophaga hutchinsonii ATCC 33406] gi|110279309|gb|ABG57495.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Cytophaga hutchinsonii ATCC 33406] Length = 352 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 26/162 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M +M ALE A + P VG V V + II + + HAE+ Sbjct: 1 MDSDERYMRRALELAMLG--SGHVSSNPMVGCVVVKDGHIIGEGYH--EKFGQP--HAEV 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 AI+ + + +L LYV LEPC C+ I +I R+ + +P Sbjct: 55 HAIQS---VPDKSLLEGSTLYVNLEPCSHYGKTPPCSHLIVDYKIARVVFANIDPNPLVA 111 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 G ++ E+ G+ E+ R++ + FF + +R Sbjct: 112 GAGFEYLMSNG----IEVIQGVLEEEGRELNRRFFTYIENKR 149 >gi|119386956|ref|YP_918011.1| CMP/dCMP deaminase, zinc-binding [Paracoccus denitrificans PD1222] gi|119377551|gb|ABL72315.1| CMP/dCMP deaminase, zinc-binding protein [Paracoccus denitrificans PD1222] Length = 157 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 51/106 (48%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + ++ A+ A P GAV V + ++++ N D TAHAE++A+R Sbjct: 3 DQAKHYLEQAVMLAHRNVQAGGRPFGAVVVRDGEVLATGVNETVATHDPTAHAELVALRA 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 L L ++ + +PC MC AA+ LA + +++Y SN G Sbjct: 63 AALRLGSPDLSACVVHASGQPCPMCLAAMRLAGVTKVHYAYSNQDG 108 >gi|304440657|ref|ZP_07400541.1| riboflavin biosynthesis protein RibD [Peptoniphilus duerdenii ATCC BAA-1640] gi|304370844|gb|EFM24466.1| riboflavin biosynthesis protein RibD [Peptoniphilus duerdenii ATCC BAA-1640] Length = 368 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 44/155 (28%), Positives = 62/155 (40%), Gaps = 20/155 (12%) Query: 1 MK--KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 MK FMS A+E A+N A + VG V V N KII ++ HAE+ Sbjct: 1 MKNLDDRYFMSRAIELAKNGIGATKTNPLVGCVIVRNEKIIGEGYHKVFGSC----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 AI E L LYV LEPC CA I RI R+ G +P Sbjct: 57 NAINDAKAK--GENLDGATLYVNLEPCSHYGKTPPCADRIIEERITRVVIGNCDPFEKVS 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + + E+ G+ ++ ++ + +F Sbjct: 115 GRGIERLK----NAGIEVEVGVLKEECEKLNERYF 145 >gi|118593750|ref|ZP_01551119.1| hypothetical protein SIAM614_03553 [Stappia aggregata IAM 12614] gi|118433660|gb|EAV40323.1| hypothetical protein SIAM614_03553 [Stappia aggregata IAM 12614] Length = 189 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 11/158 (6%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNR-NRELKDVTAHAEILAI 59 K + A E A+ A + P G + + ++ GN + E +D+TAHAE L Sbjct: 32 DKDIALLRRAFEIARQARETGDHPFGCLLAGPDGDVLMEQGNGYSAEGQDMTAHAERLLA 91 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN----PKGGGIENGTQ 115 + + L LY + EPC MC+ A+ A I R+ +G + + G E Sbjct: 92 TRASKRWRPDFLAGCTLYTSAEPCAMCSGAVYWAGIGRVVFGQTEKSLKEQTGDHEENPT 151 Query: 116 FY-----TLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 A E+ + E + + DF+ E+ Sbjct: 152 LDLPCRTVFAAGQRQVEVVGPLLEDEAASLQADFWAEK 189 >gi|292494136|ref|YP_003533279.1| Cytidine/deoxycytidylate deaminase, zinc-binding region (TBD) [Haloferax volcanii DS2] gi|291369169|gb|ADE01399.1| Cytidine/deoxycytidylate deaminase, zinc-binding region (TBD) [Haloferax volcanii DS2] Length = 153 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 1/143 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 M + E A+ AA R + P G+V V ++++I R NR D+ H E+ Sbjct: 9 DHERHMRESFELARKAAARGDEPFGSVLVRDDEVIMRDSNRIVTESDIRRHPELQLAYRA 68 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA-SNPKGGGIENGTQFYTLAT 121 CR + + +Y + EPC MCA ++ A R+ YG + G + + A Sbjct: 69 CREYDADERAAMVMYTSTEPCPMCAGGMATAGFARVVYGVGGDEIGEFTGSNPGVRSAAV 128 Query: 122 CHHSPEIYPGISEQRSRQIIQDF 144 E+ + +R++ +++ Sbjct: 129 LDAVTEVVGPVLNDEARRVHREY 151 >gi|162451647|ref|YP_001614014.1| cytidine/deoxycytidylate deaminase [Sorangium cellulosum 'So ce 56'] gi|161162229|emb|CAN93534.1| Cytidine/deoxycytidylate deaminase [Sorangium cellulosum 'So ce 56'] Length = 151 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 9/149 (6%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M + M ALE A+ A E P GA VA + +++ A + +D T HAE+ A+ Sbjct: 1 MSRDEALMGRALELARGAQRAGEPPFGALVAAPDGAVVAEATDEVNAQRDFTWHAEVGAV 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS----NPKGGGIENGTQ 115 R C + L LY T+EPC MC A LARI R+ YG + GG + Sbjct: 61 RRACAAVG-PDLQGYTLYTTVEPCPMCFTAAWLARISRIVYGCTMREVTEATGGAQRELA 119 Query: 116 FYTL---ATCHHSPEIYPGISEQRSRQII 141 ++ G+ + + + Sbjct: 120 VPAEWMNERSGAPLDLVGGVLDAQCLALF 148 >gi|295088113|emb|CBK69636.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Bacteroides xylanisolvens XB1A] Length = 351 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 20/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ +M +E A+N VGAV V N +II + AHAE+ A Sbjct: 7 MEE-EKYMRRCIELAKNGLCNVSPNPMVGAVIVCNGRIIGEGYHIRCGE----AHAEVNA 61 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + + +L +YV+LEPC CA I +I R+ G +P Sbjct: 62 IRS---VKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGR 118 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ E+ + +I+ F Sbjct: 119 GIQKLRDAGR----EVTVGVLEEECKSLIRRF 146 >gi|134094405|ref|YP_001099480.1| putative guanine deaminase [Herminiimonas arsenicoxydans] gi|133738308|emb|CAL61353.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) [Herminiimonas arsenicoxydans] Length = 153 Score = 123 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 32/112 (28%), Positives = 49/112 (43%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + A++ AQ R P GAV ++N++I+ N D T HAE+ AIR Sbjct: 5 HEKMLHQAVQLAQENRERGGRPFGAVLAIDNEVIAVGVNNIVHSHDPTTHAEMEAIRSAS 64 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + L + L +Y + PC MC AA+ L + +YY N + Sbjct: 65 QRLGRPNLKGSVIYASGHPCPMCLAAMVLTGVDAVYYAFDNKDAAPYGFSSD 116 >gi|194291404|ref|YP_002007311.1| guanine deaminase; cytidine and deoxycytidylate deaminase family [Cupriavidus taiwanensis LMG 19424] gi|193225308|emb|CAQ71250.1| Guanine deaminase; cytidine and deoxycytidylate deaminase family [Cupriavidus taiwanensis LMG 19424] Length = 155 Score = 123 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 1/108 (0%) Query: 1 MKKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M ++ ++ A +N RN P GAV V + +++RA N D +AHAE+ A+ Sbjct: 1 MSTTEAYLLDSIRLAMENVRERNTWPFGAVVVKDGTVLARAVNEVDATCDPSAHAEMQAV 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 R R L + L +Y + PC MC A+ LA + ++Y SN G Sbjct: 61 RAASRALGKPDLSGCTVYASGYPCPMCLTAMYLAGVEAVFYAYSNEDG 108 >gi|332157888|ref|YP_004423167.1| Riboflavin biosynthesis protein ribD (ribD) [Pyrococcus sp. NA2] gi|331033351|gb|AEC51163.1| Riboflavin biosynthesis protein ribD (ribD) [Pyrococcus sp. NA2] Length = 349 Score = 123 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 18/154 (11%) Query: 1 MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 MK+ +M ALE A+ R N P VGAV V N K+I + + K HAE+ A Sbjct: 1 MKEDEKYMKLALELARLGEGRVNPNPMVGAVIVKNGKVIGKGHHEYFGGK----HAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I R + + +YVTLEPC C I I R+ +P Sbjct: 57 IEDAKR--NGYSVRGATMYVTLEPCAHWGKQPPCVDRIIKEGISRVVVATLDPNPMVNGE 114 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A E+ GI ++ + ++ + +FK Sbjct: 115 GVKRLMEAG----IEVEVGILKEEAEKLNEIYFK 144 >gi|293371696|ref|ZP_06618107.1| riboflavin biosynthesis protein RibD [Bacteroides ovatus SD CMC 3f] gi|292633393|gb|EFF51963.1| riboflavin biosynthesis protein RibD [Bacteroides ovatus SD CMC 3f] Length = 351 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 20/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ +M +E A+N VGAV V + +II + AHAE+ A Sbjct: 7 MEE-EKYMKRCIELAKNGLCNVSPNPMVGAVIVCDGRIIGEGYHIRCGE----AHAEVNA 61 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + + +L +YV+LEPC CA I +I R+ G +P Sbjct: 62 IRS---VKDESLLKHSTIYVSLEPCSHYGKTPPCANLIIEKQIPRIVIGCQDPFSEVAGR 118 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ E+ + +I+ F Sbjct: 119 GIQKLRDAGR----EVTVGVLEEECKSLIRRF 146 >gi|307108051|gb|EFN56292.1| hypothetical protein CHLNCDRAFT_144679 [Chlorella variabilis] Length = 250 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 4/120 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM- 61 FM AL++A NA NE+PVG V V + +++ N+ E ++ T HAE +A+ Sbjct: 10 DDLRFMRAALQQAANALGENEVPVGCVVVRDGAVVAAGSNKTNETRNGTRHAEFVAVDAL 69 Query: 62 ---GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + PE LYVT EPC MCA A+SL R + YG N K GG + + Sbjct: 70 LQQAGGDAAAARFPECHLYVTCEPCIMCAGALSLLRFASVTYGCPNDKFGGNGSILSVHA 129 >gi|261188372|ref|XP_002620601.1| cytosine deaminase [Ajellomyces dermatitidis SLH14081] gi|239593201|gb|EEQ75782.1| cytosine deaminase [Ajellomyces dermatitidis SLH14081] gi|239609343|gb|EEQ86330.1| cytosine deaminase [Ajellomyces dermatitidis ER-3] gi|327354444|gb|EGE83301.1| cytosine deaminase [Ajellomyces dermatitidis ATCC 18188] Length = 143 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 13/140 (9%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 ALEEA+ +A IP+GA V + KI+ R N + T H EI A+ R+ + Sbjct: 11 ALEEAKKSAAVGGIPIGACLVARDGKILGRGHNMRVQKGSATLHGEIAALENSGRLPAST 70 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 + +Y T+ PC MC A L +++R+ G + GG + E+ Sbjct: 71 YV-GATMYTTMSPCDMCTGACVLYKLKRVVVGENTTFMGG--------EQYLINRGVEVV 121 Query: 130 PGISE-QRSRQIIQDFFKER 148 + + + +++Q F +ER Sbjct: 122 --VLDNKECIEMVQKFIQER 139 >gi|160876335|ref|YP_001555651.1| cytosine deaminase [Shewanella baltica OS195] gi|160861857|gb|ABX50391.1| Cytosine deaminase [Shewanella baltica OS195] gi|315268524|gb|ADT95377.1| Cytosine deaminase [Shewanella baltica OS678] Length = 145 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 10/142 (7%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F++ A+EEA+ + IP+G+V V++ KI+ R N+ + HAE+ + R Sbjct: 2 DEFLAAAIEEAKQGLVEGGIPIGSVLVIDGKIVGRGHNKRVQKGSSVLHAEMDCLENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + E LY TL PC MC+ A+ L I ++ G + G Sbjct: 62 FSAAEY-QRATLYSTLSPCDMCSGAVLLYGIPKVIVGENTTFQG--------PEAYVKSR 112 Query: 125 SPEIYPGISEQRSRQIIQDFFK 146 ++ + +Q++ DF Sbjct: 113 GVDVTV-VDNAECKQLMHDFIA 133 >gi|238925477|ref|YP_002938994.1| riboflavin biosynthesis protein [Eubacterium rectale ATCC 33656] gi|238877153|gb|ACR76860.1| riboflavin biosynthesis protein [Eubacterium rectale ATCC 33656] Length = 394 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 60/158 (37%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+E A+ VGAV V + +II + HAE A+ Sbjct: 8 TDEQYMRRAIELAKRGMGYTSPNPMVGAVIVKDGRIIGEGWHERYGEL----HAERNAL- 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 +E D+YVTLEPC C A+ A I+R+Y G+ +P G Sbjct: 63 ----KHCKESPQGADMYVTLEPCCHHGKQPPCVEAVIEAGIKRVYVGSDDPNPLVAGGGI 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + H E+ + + ++ FF + RR Sbjct: 119 KILKE----HGIEVVTQVLKDECDRLNDVFFYFIQTRR 152 >gi|310644100|ref|YP_003948858.1| riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific deaminase) and 5-amino-6-(5-phosphoribosylamino)uracil reductase) [Paenibacillus polymyxa SC2] gi|309249050|gb|ADO58617.1| Riboflavin biosynthesis protein (Diaminohydroxyphosphoribosylaminopyrimidine deaminase (Riboflavin-specific deaminase) and 5-amino-6-(5-phosphoribosylamino)uracil reductase) [Paenibacillus polymyxa SC2] Length = 366 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 49/152 (32%), Positives = 67/152 (44%), Gaps = 21/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M ALE A++A + E P VG+V V N +I+ + HAEI A Sbjct: 1 MNTHEKYMRLALENARSAKGQTEPNPLVGSVIVNNGRIVGIGAHLKPGE----PHAEIHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 +RM E +YVTLEPC+ CA AI A IRR+ A +P Sbjct: 57 LRMAG-----EHAQGATIYVTLEPCSHHGRTGPCAEAIVKAGIRRVVIAALDPNPLVSGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ EQ S ++ + F Sbjct: 112 GVQILKDAG----IEVIVGVCEQESIRMNEVF 139 >gi|108757223|ref|YP_632926.1| riboflavin biosynthesis protein RibD [Myxococcus xanthus DK 1622] gi|108461103|gb|ABF86288.1| riboflavin biosynthesis protein RibD [Myxococcus xanthus DK 1622] Length = 387 Score = 123 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 23/154 (14%) Query: 5 NVFMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM ALEEA R N + VGAV V +II+R + K +AHAE++A+ Sbjct: 29 EFFMRIALEEAAKGLGRTSPNPV-VGAVLVKGGRIIARGYH----KKAGSAHAEVVALEA 83 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 DLY TLEPC C+ AI A +RR+ +++P G Sbjct: 84 AGA-----RAKGADLYTTLEPCDHYGRTPPCSMAIIEAGVRRVICASADPNPKVSGKGVS 138 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + + ++ + FFK R Sbjct: 139 RMRRAGL----KVLTGVLAEDADRLNRPFFKMIR 168 >gi|213962287|ref|ZP_03390550.1| riboflavin biosynthesis protein RibD [Capnocytophaga sputigena Capno] gi|213954953|gb|EEB66272.1| riboflavin biosynthesis protein RibD [Capnocytophaga sputigena Capno] Length = 323 Score = 123 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 20/133 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VG V V + KII ++ HAE+ AI + + +L E LYV+LEPC Sbjct: 22 VGCVIVHDGKIIGEGWHQKAGE----PHAEVRAI---ASVKDKSLLAESTLYVSLEPCNH 74 Query: 84 ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I RI R+ G ++P G + A C E+ G+ E+ R+ Sbjct: 75 YGKTPPCADLIITHRIPRVVIGTTDPFAKVAGRGIEKLRDAGC----EVTVGVMEKECRE 130 Query: 140 IIQDFF---KERR 149 + + FF +++R Sbjct: 131 LNKRFFTFHEKKR 143 >gi|167762046|ref|ZP_02434173.1| hypothetical protein BACSTE_00394 [Bacteroides stercoris ATCC 43183] gi|167700138|gb|EDS16717.1| hypothetical protein BACSTE_00394 [Bacteroides stercoris ATCC 43183] Length = 347 Score = 123 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 61/152 (40%), Gaps = 20/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ +M ++ AQN VGAV V + KII + AHAE+ A Sbjct: 1 MEE-EKYMRRCIQLAQNGLCNAAPNPMVGAVIVCDGKIIGEGYHVRCGE----AHAEVNA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + +L +YV+LEPC CA I I R+ G +P Sbjct: 56 IRS---VKDPSLLKRSTIYVSLEPCAHYGKTPPCADLIIEKEIPRIVIGCQDPFAKVAGR 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ E R +I+ F Sbjct: 113 GIRKLKDAGR----EVITGVLEDECRSLIRRF 140 >gi|32473097|ref|NP_866091.1| cytidine and deoxycytidylate deaminase family protein [Rhodopirellula baltica SH 1] gi|32397776|emb|CAD73777.1| probable cytidine and deoxycytidylate deaminase family protein [Rhodopirellula baltica SH 1] Length = 165 Score = 123 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 41/142 (28%), Positives = 56/142 (39%), Gaps = 7/142 (4%) Query: 6 VFMSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M + E P GA V + K I+ A N+ D TAHAE++AI + Sbjct: 14 QWMKSVVTMTIEGVAMGEHPFGAGVFTDSGKQIAVAHNQVVSRCDPTAHAEVMAIGKAAK 73 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-----NPKGGGIENGTQFYTL 119 L L + L T EPC MC AAI LA I + YGAS G + Sbjct: 74 KLGDPDLSGLWLVSTGEPCPMCLAAIGLAGIEHVAYGASASTIETANFGTLGLTASELAE 133 Query: 120 ATCHHSPEIYPGISEQRSRQII 141 ++ GI E ++ Sbjct: 134 -QLSPPIQLTGGILEYDCSALL 154 >gi|326406537|gb|ADZ63608.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-5-phosphoribosylamino uracil reductase [Lactococcus lactis subsp. lactis CV56] Length = 362 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 41/155 (26%), Positives = 59/155 (38%), Gaps = 25/155 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P---VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 MKK +M A+ A+ + P VGA+ V +II + + AHAEI Sbjct: 1 MKKDEYYMDLAIVLAKKGG--GNVNPNPQVGALIVKEGRIIGQGYHEKYGK----AHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A E LYVTLEPC C AI I+R+ G +P Sbjct: 55 NAF-----KDCNESPEGAMLYVTLEPCAHQGKQPPCFEAIIKNGIKRVVIGHLDPNPLVS 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A E+ + E+ ++ + FF Sbjct: 110 GKGIKAMREAG----IEVSLNVLEKECEELNKIFF 140 >gi|238921881|ref|YP_002935395.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Eubacterium eligens ATCC 27750] gi|238873553|gb|ACR73261.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Eubacterium eligens ATCC 27750] Length = 373 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 40/156 (25%), Positives = 61/156 (39%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 K+ +M A+E A+N N P VGAV V +++II +R HAE A+ Sbjct: 11 KQDEFYMRRAIELAKNGTGWVNPNPLVGAVIVKDDRIIGEGWHRKYGEL----HAERDAL 66 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 E +YVTLEPC C A+ A I R+ G+ +P G Sbjct: 67 -----SRCMEDTSGATIYVTLEPCCHHGKQPPCTEALVQAGISRVVIGSMDPNPLVSGKG 121 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 ++ H ++ + + + FF R Sbjct: 122 VKYLEE----HGIKVEGCVCNEECLAMNYVFFHYIR 153 >gi|237742612|ref|ZP_04573093.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium sp. 4_1_13] gi|229430260|gb|EEO40472.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium sp. 4_1_13] Length = 369 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 25/153 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M+ A+E A+ + P VGAV V + KII ++ HAE+ A+ Sbjct: 6 DEKYMARAIELAKRG--IGGVNPNPLVGAVIVKDGKIIGEGWHKKFGG----PHAEVWAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 +E +YVTLEPC CA I A I+R +P G Sbjct: 60 NEA-----EENAEGATIYVTLEPCSHQGKTPPCAKRIVEAGIKRCVVACIDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + + + G+ E+ +++I + FFK Sbjct: 115 IKIIE----NAGITVKLGVLEKEAKEINKIFFK 143 >gi|325299195|ref|YP_004259112.1| riboflavin biosynthesis protein RibD [Bacteroides salanitronis DSM 18170] gi|324318748|gb|ADY36639.1| riboflavin biosynthesis protein RibD [Bacteroides salanitronis DSM 18170] Length = 356 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 23/154 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M + ++S ++ A+N P VGAV V ++II + HAE+ Sbjct: 1 MTQDEKYISRCIQLAKNGLC--NTPPNPMVGAVIVYQDRIIGEGYHIRCGEG----HAEV 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 AI + + +L + LYV+LEPC CA I I R+ G ++P Sbjct: 55 NAI---ASVKDESLLRQSTLYVSLEPCSHYGKTPPCADLIIRKGIPRVVVGCTDPFPLVS 111 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ EQ + +I+ F Sbjct: 112 GRGIQKLRDAG----VEVKVGVLEQECKDLIRRF 141 >gi|291527733|emb|CBK93319.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Eubacterium rectale M104/1] Length = 388 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 38/158 (24%), Positives = 61/158 (38%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+E A+ VGAV V + +II + HAE A+ Sbjct: 2 TDEQYMRRAIELAKRGMGYTSPNPMVGAVIVKDGRIIGEGWHERYGEL----HAERNAL- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 +E ++YVTLEPC C A+ A I+R+Y G+ +P G Sbjct: 57 ----KHCKESPQGAEMYVTLEPCCHHGKQPPCVEAVIEAGIKRVYVGSDDPNPLVAGGGI 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + H E+ + + ++ + FF + RR Sbjct: 113 KILKE----HGIEVVTQVLKDECDRLNEVFFYFIQTRR 146 >gi|254562307|ref|YP_003069402.1| Guanine deaminase [Methylobacterium extorquens DM4] gi|254269585|emb|CAX25555.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH) (GDEase) [Methylobacterium extorquens DM4] Length = 153 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 32/99 (32%), Positives = 51/99 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M ++ A E A P GAV V + ++++RA NR D + HAE++AIR Sbjct: 1 MPDHESYLREATEIALANVAEGGRPYGAVIVRDGEVVARAANRIHATNDPSDHAEMVAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 + L + L + +Y + PC MC AA+ LA +++ Y Sbjct: 61 AASQQLGRPKLDDCIVYASGRPCPMCHAAMRLAGVKQGY 99 >gi|295398347|ref|ZP_06808389.1| riboflavin biosynthesis protein RibD [Aerococcus viridans ATCC 11563] gi|294973486|gb|EFG49271.1| riboflavin biosynthesis protein RibD [Aerococcus viridans ATCC 11563] Length = 364 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 21/152 (13%) Query: 1 MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 MK +M AL+ A+ R+ VGAV V N++II R ++ HAE A Sbjct: 1 MKD---YMQEALDLAELGQGWTRSNPMVGAVIVKNSQIIGRGYHQQYGGL----HAEREA 53 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++ + +YVTLEPC C AI I ++ A +P Sbjct: 54 LKDANE--QGHDVKGATMYVTLEPCCHFGKTPPCTQAIIEGGIEKVVVAAIDPNPLVAGK 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q +H E+ G+ + S + + F Sbjct: 112 GIQELR----NHHIEVETGLLAEESEDLNRKF 139 >gi|255658129|ref|ZP_05403538.1| riboflavin biosynthesis protein RibD [Mitsuokella multacida DSM 20544] gi|260849436|gb|EEX69443.1| riboflavin biosynthesis protein RibD [Mitsuokella multacida DSM 20544] Length = 363 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 48/152 (31%), Positives = 67/152 (44%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM ALE A+NA R VGAV V +I++ +R K T HAEI A+R Sbjct: 2 QDEEFMREALELARNAEGRTSPNPMVGAVIVQGGRIVAAGWHR----KAGTPHAEIHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 M + LYVTLEPC+ CA A+ A I+R +P G Sbjct: 58 MAGELA-----KGATLYVTLEPCSHYGRTGPCAKAVVEAGIKRCVIAMKDPNPLVAGRGI 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + A E G+ E+ +R++ + F K Sbjct: 113 KILEDAG----VETVCGVLEEEARRLNEVFLK 140 >gi|241956270|ref|XP_002420855.1| cytosine aminohydrolase, putative; cytosine deaminase, putative [Candida dubliniensis CD36] gi|223644198|emb|CAX41008.1| cytosine aminohydrolase, putative [Candida dubliniensis CD36] Length = 150 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 58/149 (38%), Gaps = 15/149 (10%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + AL++A+ + IP+G + + ++ + N + H E+ A+ Sbjct: 4 DDKKGLQIALDQAKKSYFEGGIPIGSCIISSDGTVLGQGHNERIQKHSSILHGEMSALEN 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R+ + + +Y TL PC+MC AI L +R+ G F Sbjct: 64 AGRLPGKTY-KDCTIYTTLSPCSMCTGAILLYGFKRVVMGE----------NVNFLGNEK 112 Query: 122 C--HHSPEIYPGISEQRSRQIIQDFFKER 148 + E+ +++Q ++ F KE+ Sbjct: 113 LLVENGVEVV-NLNDQACIDLMAKFIKEK 140 >gi|329956196|ref|ZP_08296876.1| riboflavin biosynthesis protein RibD [Bacteroides clarus YIT 12056] gi|328524670|gb|EGF51731.1| riboflavin biosynthesis protein RibD [Bacteroides clarus YIT 12056] Length = 347 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 63/152 (41%), Gaps = 20/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ +M ++ AQN VGAV V + KII + AHAE+ A Sbjct: 1 MEE-EKYMRRCIQLAQNGLCNAAPNPMVGAVVVCDGKIIGEGYHVRCGE----AHAEVNA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + +L +YV+LEPC CA I +I R+ G +P Sbjct: 56 IRS---VKEPSLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFAKVAGR 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ EQ R +I+ F Sbjct: 113 GIQKLKDAGR----EVTVGVLEQECRNLIRRF 140 >gi|325103646|ref|YP_004273300.1| riboflavin biosynthesis protein RibD [Pedobacter saltans DSM 12145] gi|324972494|gb|ADY51478.1| riboflavin biosynthesis protein RibD [Pedobacter saltans DSM 12145] Length = 347 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 22/157 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M ++FM A++ A A + P VGAV + +II ++ +HAE+ Sbjct: 1 MTNDSIFMQRAIDLALLGA--GSVSPNPMVGAVVAHDGQIIGEGYHKKYGE----SHAEV 54 Query: 57 LAIRMGCRILSQEI--LPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108 AI+ L + +YVTLEPC CA I I R+ G +P Sbjct: 55 NAIQNVIDNFKNADHLLKQSTIYVTLEPCAHYGKTPPCADLIIKHCIPRIVIGCRDPFDS 114 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + +A E+ G+ E ++ + FF Sbjct: 115 VNGKGIEKLLIAG----KEVITGVLETECLELNRRFF 147 >gi|224025262|ref|ZP_03643628.1| hypothetical protein BACCOPRO_01999 [Bacteroides coprophilus DSM 18228] gi|224018498|gb|EEF76496.1| hypothetical protein BACCOPRO_01999 [Bacteroides coprophilus DSM 18228] Length = 306 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 19/152 (12%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K ++ ++ A+N VGAV V ++II + HAE+ A Sbjct: 1 MTKDEKYIRRCIQLARNGLCNAAPNPMVGAVVVYRDRIIGEGYHARCGEG----HAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R + + +L E LYV+LEPC CA I I R+ G +P Sbjct: 57 LRS---VRDESLLKEATLYVSLEPCSHYGKTPPCADLIVSKGIPRVVVGCMDPFPLVAGR 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A ++ G+ E+ R++I+ F Sbjct: 114 GIRKLEEAG----IDVTVGVLEEECRELIRRF 141 >gi|257067316|ref|YP_003153571.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810] gi|256558134|gb|ACU83981.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810] Length = 175 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 12/148 (8%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + F+S A+E+A+ + +P+GAV V + K+++ N+ + H E I Sbjct: 8 EDDRRFLSLAIEQARKSWDEGGVPIGAVLVHDGKVLAAGHNQRVQKDSAILHGETDTIEK 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R+ + + E LY TL PC MCA L I R+ G + E Sbjct: 68 AGRLRAS-VYRESVLYTTLSPCIMCAGTALLYEIPRIVIGENR----AFEMSEALLRERG 122 Query: 122 CHHSPEIYPGISEQ-RSRQIIQDFFKER 148 + + + ++++ ER Sbjct: 123 ------VAVDVLDDPECIELMERMIAER 144 >gi|317056285|ref|YP_004104752.1| riboflavin biosynthesis protein RibD [Ruminococcus albus 7] gi|315448554|gb|ADU22118.1| riboflavin biosynthesis protein RibD [Ruminococcus albus 7] Length = 369 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 59/153 (38%), Gaps = 22/153 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 FM AL A+ + P VGAV V + II+ ++ HAE A Sbjct: 3 HEDFMREALALAEKGM--GHVSPNPMVGAVIVRDGNIIASGYHKRYGDL----HAERSAF 56 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 D+YVTLEPC C A+ I+R++ G+S+P G Sbjct: 57 --AECDAKDIDCRGADMYVTLEPCCHHGKQPPCTDAVIEHGIKRVFVGSSDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 T H E+ G+ + ++ + FFK Sbjct: 115 TAILRE----HGIEVTEGVLKDECDRLNEIFFK 143 >gi|294793755|ref|ZP_06758892.1| riboflavin biosynthesis protein RibD [Veillonella sp. 3_1_44] gi|294455325|gb|EFG23697.1| riboflavin biosynthesis protein RibD [Veillonella sp. 3_1_44] Length = 403 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 41/151 (27%), Positives = 61/151 (40%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 V+M A+E A+ A P VGAV V +N II + K TAHAE+ A+ Sbjct: 2 DDVVYMKRAIELAKLATGHTSPNPLVGAVVVKDNTIIGEGYHH----KAGTAHAEVHALN 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + LYVTLEPC CA I A I ++ G+++P G Sbjct: 58 QAG-----DNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGKGM 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A ++ + ++ + FF Sbjct: 113 ELLREAG----IKVVCPVCSDECAELNEHFF 139 >gi|300856157|ref|YP_003781141.1| putative purine deaminase, zinc-binding domain [Clostridium ljungdahlii DSM 13528] gi|300436272|gb|ADK16039.1| putative purine deaminase, zinc-binding domain [Clostridium ljungdahlii DSM 13528] Length = 163 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 1/101 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 K ++ A E A+N+ P GA+ V + I+ N D T HAE +R Sbjct: 4 KDHLYYLRRANEIAKNSREHGNTPFGALLVDKDGNILLEQENIEISTGDCTGHAEASLMR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + S+E L E LY T EPC MC+ AI +R + YG Sbjct: 64 RASQKYSKEFLAECTLYTTFEPCVMCSGAIYWGNVRTVVYG 104 >gi|83589766|ref|YP_429775.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Moorella thermoacetica ATCC 39073] gi|83572680|gb|ABC19232.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Moorella thermoacetica ATCC 39073] Length = 376 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +FM+ ALE A+ R P VGAV V + +++ ++ K T HAEI A+R Sbjct: 4 QDAIFMARALELARQGLGRTSPNPTVGAVIVRDGQVVGEGYHQ----KAGTPHAEIHALR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 LYVTLEPC C AI A I+R+ ++P G Sbjct: 60 AAGEKA-----RGATLYVTLEPCCHYGRTPPCTEAIIAAGIKRVVAAMADPNPRVAGGGF 114 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + + A E+ G+ +R++ + F K Sbjct: 115 RALSQAG----IEVETGLLADEARRLNEAFIK 142 >gi|218131999|ref|ZP_03460803.1| hypothetical protein BACEGG_03622 [Bacteroides eggerthii DSM 20697] gi|217985875|gb|EEC52215.1| hypothetical protein BACEGG_03622 [Bacteroides eggerthii DSM 20697] Length = 347 Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 20/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ +M ++ AQN VGAV V + KII + AHAE+ A Sbjct: 1 MEE-EKYMRRCIQLAQNGLCNTAPNPMVGAVIVCDGKIIGEGYHIRCGE----AHAEVNA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + +L +YV+LEPC CA I +I R+ G +P Sbjct: 56 IRS---VKEPSLLKRSTIYVSLEPCAHYGKTPPCADLIIEKQIPRIVIGCQDPFAKVAGR 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ E+ + +I+ F Sbjct: 113 GIQKLKDAGR----EVIVGVLEEDCKNLIRRF 140 >gi|291524228|emb|CBK89815.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Eubacterium rectale DSM 17629] Length = 386 Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 60/158 (37%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+E A+ VGAV V + +II + HAE A+ Sbjct: 2 TDEQYMRRAIELAKRGMGYTSPNPMVGAVIVKDGRIIGEGWHERYGEL----HAERNAL- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 +E D+YVTLEPC C A+ A I+R+Y G+ +P G Sbjct: 57 ----KHCKESPQGADMYVTLEPCCHHGKQPPCVEAVIEAGIKRVYVGSDDPNPLVAGGGI 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + H E+ + + ++ FF + RR Sbjct: 113 KILKE----HGIEVVTQVLKDECDRLNDVFFYFIQTRR 146 >gi|295104352|emb|CBL01896.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Faecalibacterium prausnitzii SL3/3] Length = 374 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 56/151 (37%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ VGAV V +II + ++ AHAE A+ Sbjct: 2 NDKEYMRLALQLAKKGCGWTSPNPMVGAVVVKEGRIIGQGWHQRYGQ----AHAERNAL- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E LYVTLEPC C AI A I R+ G+++P G Sbjct: 57 ----ASCTEDPQGATLYVTLEPCCHYGKQPPCVDAILDAGIHRVVVGSADPNPLVAGKGI 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 H ++ + ++ + + FF Sbjct: 113 AILRA----HGIDVTENVLQEECDALNKVFF 139 >gi|313114897|ref|ZP_07800395.1| riboflavin biosynthesis protein RibD [Faecalibacterium cf. prausnitzii KLE1255] gi|310622774|gb|EFQ06231.1| riboflavin biosynthesis protein RibD [Faecalibacterium cf. prausnitzii KLE1255] Length = 374 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 56/151 (37%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ VGAV V +II + ++ AHAE A+ Sbjct: 2 NDKEYMRLALQLAKKGCGWTSPNPMVGAVVVKEGRIIGQGWHQRYGQ----AHAERNAL- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E LYVTLEPC C AI A I R+ G+++P G Sbjct: 57 ----ASCTEDPQGATLYVTLEPCCHYGKQPPCVDAILDAGIHRVVVGSADPNPLVAGKGI 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 H ++ + ++ + + FF Sbjct: 113 AILRA----HGIDVTENVLQEECDALNKVFF 139 >gi|160944654|ref|ZP_02091881.1| hypothetical protein FAEPRAM212_02168 [Faecalibacterium prausnitzii M21/2] gi|158443838|gb|EDP20842.1| hypothetical protein FAEPRAM212_02168 [Faecalibacterium prausnitzii M21/2] Length = 374 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 56/151 (37%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ VGAV V +II + ++ AHAE A+ Sbjct: 2 NDKEYMRLALQLAKKGCGWTSPNPMVGAVVVKEGRIIGQGWHQRYGQ----AHAERNAL- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E LYVTLEPC C AI A I R+ G+++P G Sbjct: 57 ----ASCTEDPQGATLYVTLEPCCHYGKQPPCVDAILDAGIHRVVVGSADPNPLVAGKGI 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 H ++ + ++ + + FF Sbjct: 113 AILRA----HGIDVTENVLQEECDALNKVFF 139 >gi|317474402|ref|ZP_07933676.1| riboflavin biosynthesis protein RibD [Bacteroides eggerthii 1_2_48FAA] gi|316909083|gb|EFV30763.1| riboflavin biosynthesis protein RibD [Bacteroides eggerthii 1_2_48FAA] Length = 347 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 20/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ +M ++ AQN VGAV V + KII + AHAE+ A Sbjct: 1 MEE-EKYMRRCIQLAQNGLCNTAPNPMVGAVIVCDGKIIGEGYHIRCGE----AHAEVNA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + +L +YV+LEPC CA I +I R+ G +P Sbjct: 56 IRS---VKEPSLLKRSTIYVSLEPCAHYGKTPPCADLIIEKQIPRIVIGCQDPFAKVAGR 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ E+ + +I+ F Sbjct: 113 GIQKLKDAGR----EVIVGVLEEDCKNLIRRF 140 >gi|301064689|ref|ZP_07205078.1| riboflavin biosynthesis protein RibD [delta proteobacterium NaphS2] gi|300441231|gb|EFK05607.1| riboflavin biosynthesis protein RibD [delta proteobacterium NaphS2] Length = 369 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 22/153 (14%) Query: 1 MKK-GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M+K FM A++EA+ R VGAV V ++++ ++ + HAE+ Sbjct: 1 MEKNDTHFMKLAVKEARKGLGRTSPNPAVGAVIVKEGRVVASGFHK--QAGMP--HAEVE 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A R P LYVTLEPC C I + ++R+ G +P Sbjct: 57 AFRKVGN-----RAPGATLYVTLEPCNHHGKTPPCTELILKSGVKRVVVGMRDPNPLVTG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + E+ GI E ++ + F Sbjct: 112 GGCDYLEKKGL----EVVTGILEDECIRLNEAF 140 >gi|171915861|ref|ZP_02931331.1| riboflavin biosynthesis protein RibD [Verrucomicrobium spinosum DSM 4136] Length = 354 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 16/150 (10%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M AL EA+ VGAV V ++I + + HAE+ A+R Sbjct: 5 EDEKWMRLALAEARRGIGLTSPNPAVGAVLVNEGRLIGQGWHHRVGQ----PHAEVEALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC+ C A++ A + R+ YGA++P G Sbjct: 61 NAEANGHGAEIRGATAYVTLEPCSTHGRTGACTVALAKAGVSRVVYGATDPNPGHAGAAD 120 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A + G+ + ++++ F Sbjct: 121 RLLQEAG----IAVLSGVLREECEEVLRPF 146 >gi|308070849|ref|YP_003872454.1| riboflavin biosynthesis protein ribD [Paenibacillus polymyxa E681] gi|305860128|gb|ADM71916.1| Riboflavin biosynthesis protein ribD [Paenibacillus polymyxa E681] Length = 366 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 49/152 (32%), Positives = 67/152 (44%), Gaps = 21/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M ALE A++A + E P VG+V V N +I+ + HAEI A Sbjct: 1 MTTHEKYMRLALENARSAKGQTEPNPLVGSVIVNNGRIVGIGAHLKPGE----PHAEIHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 +RM E +YVTLEPC+ CA AI A IRR+ A +P Sbjct: 57 LRMAG-----EHAQGATIYVTLEPCSHHGRTGPCAEAIVKAGIRRVVIAALDPNPLVSGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ EQ S ++ + F Sbjct: 112 GVQILKDAG----IEVIVGVCEQESIRMNEVF 139 >gi|121702783|ref|XP_001269656.1| cytosine deaminase, putative [Aspergillus clavatus NRRL 1] gi|119397799|gb|EAW08230.1| cytosine deaminase, putative [Aspergillus clavatus NRRL 1] Length = 148 Score = 121 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 14/150 (9%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M++ F+ A+EEA+ +P+GA V + KI+ R N + HAE+ A+ Sbjct: 1 MEQDPGFI-AAVEEAKKGLAEGGVPIGAALVSKDGKILGRGHNMRVQKGSAVLHAEMAAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R+ +Y TL PC MC A L ++R+ G + GG E Sbjct: 60 EDSGRLPGSAY-EGATMYTTLSPCDMCTGACILYNVKRVVIGENKNFVGGEEYLLSRGR- 117 Query: 120 ATCHHSPEIYPGISE-QRSRQIIQDFFKER 148 E+ + + + ++ + F KE+ Sbjct: 118 -------EVV--VLDNEECKEFMGAFIKEK 138 >gi|289549140|ref|YP_003474128.1| riboflavin biosynthesis protein RibD [Thermocrinis albus DSM 14484] gi|289182757|gb|ADC90001.1| riboflavin biosynthesis protein RibD [Thermocrinis albus DSM 14484] Length = 353 Score = 121 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 21/146 (14%) Query: 8 MSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M ALE A+ VG V V + KIIS + HAE++A+ + Sbjct: 1 MGRALELARLRKGLTHPNPTVGCVVVKDGKIISEGYHERAGA----PHAEVVALSKAGQ- 55 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + LYVTLEPC C AI A ++R+ +P + +G + Sbjct: 56 ----NAKDSTLYVTLEPCSHYGRTPPCTNAIIEAGVKRVVVATLDPNPKVMGSGIERLRA 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145 A ++ G+ E+ +RQ+ +DFF Sbjct: 112 AG----IQVDVGVLEEEARQLNEDFF 133 >gi|269121379|ref|YP_003309556.1| riboflavin biosynthesis protein RibD [Sebaldella termitidis ATCC 33386] gi|268615257|gb|ACZ09625.1| riboflavin biosynthesis protein RibD [Sebaldella termitidis ATCC 33386] Length = 363 Score = 121 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 21/151 (13%) Query: 4 GNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M ALE A+ N P VGAV V + ++ + + HAE+ A+ Sbjct: 2 DKKYMEMALEIAEKGLGHVNPNPLVGAVVVKDGTVVGKGYHGVYGG----PHAEVYALDE 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + D+YVTLEPC CA I + I+R + G+ +P G + Sbjct: 58 AGKSA-----EGADIYVTLEPCSHYGKTPPCAKKIIESGIKRCFVGSIDPNPLVSGKGIE 112 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 E++ G+ ++ I + FFK Sbjct: 113 MLKEND----IEVHTGVLKEECDNINKAFFK 139 >gi|187735315|ref|YP_001877427.1| riboflavin biosynthesis protein RibD [Akkermansia muciniphila ATCC BAA-835] gi|187425367|gb|ACD04646.1| riboflavin biosynthesis protein RibD [Akkermansia muciniphila ATCC BAA-835] Length = 356 Score = 121 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 16/151 (10%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + + +M+ A++ A N L + P VGAV V N++I ++ L HAE AI Sbjct: 10 NQDDCWMNMAIKLASNGIGLTSPNPCVGAVIVHENQVIGSGFHKKAGL----PHAEREAI 65 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 G + + + LYVTLEPC C AI R +R+ YG+ +P Sbjct: 66 ADGVANGNAPLFADSTLYVTLEPCSTSGKTPPCTDAILKYRFKRVVYGSEDPNPKHRGAA 125 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ E+ ++I+ F Sbjct: 126 ADILEQAG----IKVTRGVLEKECDRLIRRF 152 >gi|312977170|ref|ZP_07788918.1| riboflavin biosynthesis protein RibD [Lactobacillus crispatus CTV-05] gi|310895601|gb|EFQ44667.1| riboflavin biosynthesis protein RibD [Lactobacillus crispatus CTV-05] Length = 355 Score = 121 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+K N +M+ ALEEA+ + P VGAV V N ++++ + + HAE A Sbjct: 4 MEKDNFYMNLALEEAKKGRYQTWKNPMVGAVIVKNGQVLATGYHHHYGQN----HAERDA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I L+ E L LYVTLEPC C+ I + I+R+ G +P Sbjct: 60 I----SKLTPEQLFNSTLYVTLEPCNHYGKQPPCSDLIIKSGIKRVVVGQIDPHKLVTGK 115 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G ++ G+ + ++ + F+ Sbjct: 116 GIAKLQENG----VQVTTGVLADDASKLNK-FY 143 >gi|225848913|ref|YP_002729077.1| riboflavin biosynthesis protein RibD [Sulfurihydrogenibium azorense Az-Fu1] gi|225644745|gb|ACN99795.1| riboflavin biosynthesis protein RibD [Sulfurihydrogenibium azorense Az-Fu1] Length = 366 Score = 121 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 18/153 (11%) Query: 1 MKKGNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ +M+ AL+ A + VGAV V + KII + + + HAE A Sbjct: 1 MENLEYYMNIALDLAKERKGYTHPNPTVGAVIVKDGKIIGKGFH--YKAGMP--HAEREA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I+ L ++V+LEPC C AI I ++ +P Sbjct: 57 IKDA--KSKGFDLRGSTIFVSLEPCCHYGKTPPCTEAILEEGISKVVVATLDPNPLVAGK 114 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + E+ G+ E+++++I +DFF Sbjct: 115 GVEILKQKG----VEVVLGVLEKQAQKINEDFF 143 >gi|240103311|ref|YP_002959620.1| Riboflavin biosynthesis protein ribD (ribD) [Thermococcus gammatolerans EJ3] gi|239910865|gb|ACS33756.1| Riboflavin biosynthesis protein ribD (ribD) [Thermococcus gammatolerans EJ3] Length = 408 Score = 121 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 41/155 (26%), Positives = 60/155 (38%), Gaps = 22/155 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 + FM ALE A+ + P VGAV V + K+I ++ K HAE+ Sbjct: 51 NEDERFMRLALELAKRG--EGWVNPNPMVGAVIVKDGKVIGVGWHKRFGEK----HAEVN 104 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AI R +YVTLEPC CA I +R+ +P Sbjct: 105 AIEDAKRKGHDVR--GATMYVTLEPCSHWGKQPPCADRIIREGFKRVVVAMVDPNPLVSG 162 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A E+ G+ E +R++ + F K Sbjct: 163 RGIEKMKKAG----IEVEVGVLEDEARKLNEIFIK 193 >gi|119961232|ref|YP_946898.1| cytosine deaminase [Arthrobacter aurescens TC1] gi|119948091|gb|ABM07002.1| Cytosine deaminase [Arthrobacter aurescens TC1] Length = 150 Score = 121 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 52/137 (37%), Gaps = 14/137 (10%) Query: 9 SCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 A + AQ + IP+GA K+I+ N + D AH E+ A+R R S Sbjct: 13 EAAYQAAQKSLSEGGIPIGAALARGGKVIASGHNERVQHGDPIAHGEMSALRAAGRQTS- 71 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 + LY TL PC MC I +I R+ G + G E+ Sbjct: 72 --YRDTTLYTTLAPCAMCTGTIIQFKIPRVVVGEAETFPGE----FDLLRSRG----VEV 121 Query: 129 YPGISEQ-RSRQIIQDF 144 + + R +++ F Sbjct: 122 V--VLDDPRCVDMMRTF 136 >gi|300813870|ref|ZP_07094175.1| riboflavin biosynthesis protein RibD [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512057|gb|EFK39252.1| riboflavin biosynthesis protein RibD [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 372 Score = 121 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 18/151 (11%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +MS A+E A+ VG V V +++II R ++ HAE +AI Sbjct: 6 DYRSYMSLAMELAEKGKGFTLTNPMVGCVIVNDDRIIGRGYHKKFGDL----HAETMAIE 61 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + E L LYV LEPC C AI +I+++ +P G Sbjct: 62 DA--KKNGESLEGSTLYVNLEPCCHYGKQPPCTKAIIENKIKKVVIANVDPNKKVSGKGI 119 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A E+ GI E+ ++ ++FF Sbjct: 120 KTLEDAG----IEVVEGIMEEEGLKLNEEFF 146 >gi|150003437|ref|YP_001298181.1| riboflavin biosynthesis protein ribD [Bacteroides vulgatus ATCC 8482] gi|254881264|ref|ZP_05253974.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 4_3_47FAA] gi|149931861|gb|ABR38559.1| riboflavin biosynthesis protein ribD [Bacteroides vulgatus ATCC 8482] gi|254834057|gb|EET14366.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 4_3_47FAA] Length = 350 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K ++S L+ A N VGAV V ++ II + AHAE+ A Sbjct: 1 MTKDEKYISRCLQLAYNGLCNTAPNPMVGAVIVYHDTIIGEGYHIRCGE----AHAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + + +L E +YV+LEPC CA I RI ++ G +P Sbjct: 57 IRS---VKDENLLKESTIYVSLEPCSHYGKTPPCADLIIEKRIPKVVIGCIDPYSQVAGK 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ E+ R +I+ F Sbjct: 114 GIEKLRKAG----IEVTVGVLEEECRHLIRRF 141 >gi|146329385|ref|YP_001209386.1| riboflavin biosynthesis protein RibD [Dichelobacter nodosus VCS1703A] gi|146232855|gb|ABQ13833.1| riboflavin biosynthesis protein RibD [Dichelobacter nodosus VCS1703A] Length = 368 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 42/156 (26%), Positives = 60/156 (38%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M ALE A+N+ P VG V V N+ II ++ AHAEI A+ Sbjct: 10 DSDLFYMHRALELARNSIFSAAPNPRVGCVIVKNHTIIGEGWHQRAGE----AHAEINAL 65 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + +YVTLEPC C A+ A ++R+ S+P G Sbjct: 66 NAAGTQA-----RDATVYVTLEPCAHFGRTPPCTHALIAAGVKRVVIACSDPNPLVAGKG 120 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + GI Q + Q+ + FF R Sbjct: 121 IAALRAAG----ISVEQGICAQEALQLNRPFFHRMR 152 >gi|262042008|ref|ZP_06015188.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040626|gb|EEW41717.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 152 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 33/107 (30%), Positives = 55/107 (51%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + ++ AL A+ P GAV V N++I++ + N + TAHAE+ A+R Sbjct: 1 MSAHDRYLQRALVLAKQNIADGGRPFGAVLVRNDEIVAESVNTFHLSGEPTAHAELNAVR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 L +L E +Y + +PC MC +A+ L +R +++ SN G Sbjct: 61 DLAARLGSAVLRECVIYASGQPCPMCLSALYLTGVREVFFANSNQDG 107 >gi|229046739|ref|ZP_04192382.1| Cytosine deaminase [Bacillus cereus AH676] gi|229110499|ref|ZP_04240069.1| Cytosine deaminase [Bacillus cereus Rock1-15] gi|229128373|ref|ZP_04257354.1| Cytosine deaminase [Bacillus cereus BDRD-Cer4] gi|228655232|gb|EEL11089.1| Cytosine deaminase [Bacillus cereus BDRD-Cer4] gi|228672983|gb|EEL28257.1| Cytosine deaminase [Bacillus cereus Rock1-15] gi|228724557|gb|EEL75871.1| Cytosine deaminase [Bacillus cereus AH676] Length = 158 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 7/142 (4%) Query: 10 CALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 ALEEA+ A N PVGAV V NN +I+R NR KD+TAHAE+ AIR + Sbjct: 1 MALEEAEKALKENTYPVGAVIVDGNNNVIARGRNRVHPEKDITAHAELDAIRNAGEAMFD 60 Query: 69 EILPE--VDLYVTLEPCTMCAAAISLARIRRLYYGASNP-KGGGIENGTQFYTLATCHHS 125 + +Y TLEPC MC I A+I+R+ + ++ GG + + Sbjct: 61 AKIKNERFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFGGYKKIKNALVFEGKFNK 120 Query: 126 PEIYPGISEQ---RSRQIIQDF 144 ++ E R R++++ + Sbjct: 121 IDMVEEPFEDLKTRQRELMRQW 142 >gi|294777680|ref|ZP_06743131.1| riboflavin biosynthesis protein RibD [Bacteroides vulgatus PC510] gi|319640266|ref|ZP_07994991.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 3_1_40A] gi|294448748|gb|EFG17297.1| riboflavin biosynthesis protein RibD [Bacteroides vulgatus PC510] gi|317388041|gb|EFV68895.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 3_1_40A] Length = 350 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K ++S L+ A N VGAV V ++ II + AHAE+ A Sbjct: 1 MTKDEKYISRCLQLAYNGLCNTAPNPMVGAVIVYHDTIIGEGYHIRCGE----AHAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + + +L E +YV+LEPC CA I RI ++ G +P Sbjct: 57 IRS---VKDENLLKESTIYVSLEPCSHYGKTPPCADLIIEKRIPKVVIGCIDPFSQVAGR 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ E+ R +I+ F Sbjct: 114 GIEKLRKAG----IEVTVGVLEEECRHLIRRF 141 >gi|163851859|ref|YP_001639902.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1] gi|163663464|gb|ABY30831.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1] Length = 301 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 43/126 (34%), Positives = 56/126 (44%), Gaps = 22/126 (17%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL----NNKIIS--RAGNRNRELKDVTAHAEIL 57 GN +M A EEA+ + P GAV + N++I R N E +D TAHAE+ Sbjct: 125 GNQWMRMASEEARISVENGGGPFGAVILQIDDETNEVIRYWRNHNHVPEWRDPTAHAEVS 184 Query: 58 AIRMGCRILSQEIL----------------PEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 AIR CR L L +Y + EPC MC AAI ARI +L + Sbjct: 185 AIRAACRELGVFSLASIKKEESKLPQKGATSHTVIYSSAEPCPMCYAAIYWARIPKLVFA 244 Query: 102 ASNPKG 107 A+ Sbjct: 245 ATRYDA 250 >gi|15605717|ref|NP_213094.1| riboflavin specific deaminase [Aquifex aeolicus VF5] gi|6225948|sp|O66534|RIBD_AQUAE RecName: Full=Riboflavin biosynthesis protein RibD; Includes: RecName: Full=Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase; Includes: RecName: Full=5-amino-6-(5-phosphoribosylamino)uracil reductase; AltName: Full=HTP reductase gi|2982867|gb|AAC06487.1| riboflavin specific deaminase [Aquifex aeolicus VF5] Length = 356 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 57/150 (38%), Gaps = 21/150 (14%) Query: 4 GNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL A + VGAV V KI+ + HAE++A+ Sbjct: 6 DKNYMKLALSLAKKRKGYTHPNPTVGAVVVKEGKIVGLGYHEKAGK----PHAEVMALGQ 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 LYVTLEPC C AI + I+R+ +P G + Sbjct: 62 AGEKA-----KGATLYVTLEPCTHFGRTPPCTDAIIRSGIKRVVVATLDPNPLMSGKGVE 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ E+ +R++ +DFF Sbjct: 117 KLRNAG----IEVDVGVCEEEARELNEDFF 142 >gi|116671966|ref|YP_832899.1| CMP/dCMP deaminase, zinc-binding [Arthrobacter sp. FB24] gi|116612075|gb|ABK04799.1| CMP/dCMP deaminase, zinc-binding protein [Arthrobacter sp. FB24] Length = 164 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 2/118 (1%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +++ ++ A L + P GAV V + + NR D TAHAE+ AIR C Sbjct: 10 YLAKSIRLATANVLNSGGPFGAVVVTADGQSFG-GVNRVTATNDPTAHAEVTAIRRACSE 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L L LY + EPC MC A+ AR+ R+ + A + + + Sbjct: 69 LGTFDLTGATLYTSCEPCPMCLASALWARVERVVFAADRHDAASVGFDDAVFYEYFEN 126 >gi|332878860|ref|ZP_08446575.1| riboflavin biosynthesis protein RibD [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683211|gb|EGJ56093.1| riboflavin biosynthesis protein RibD [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 350 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 24/159 (15%) Query: 3 KGNVFMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ ++ AQN N + VG+V V N+++I + AHAE+ AI Sbjct: 2 TDQQYIHRCIQLAQNGLGTTYPNPV-VGSVIVYNDRVIGEGWHVRAGE----AHAEVRAI 56 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + +++L E LYV+LEPC CA I RI R+ G ++P G Sbjct: 57 ---ASVKDKQLLSESTLYVSLEPCSHYGKTPPCADLIIAHRIPRVVIGCTDPFAKVAGRG 113 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 Q A C E+ G+ ++ + + FF +++R Sbjct: 114 IQKLREAGC----EVVVGVCQEECEALNKRFFTFHQKKR 148 >gi|307102708|gb|EFN50977.1| hypothetical protein CHLNCDRAFT_33285 [Chlorella variabilis] Length = 167 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 4/104 (3%) Query: 4 GNVFMSCALEEAQNAALRNEIP--VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAI 59 +M A+E + A L + GA+ V +++ N+ D T H E+ AI Sbjct: 7 HETYMKRAIELSAKAGLEEQTGGCFGALIVDKETGEVVGEGYNKVILNNDPTWHGEMEAI 66 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 R C+ +P Y + +PC MC AI AR+ +YYGA+ Sbjct: 67 REACKARGSPHIPGTVCYTSAQPCPMCYTAIMWARVDHVYYGAT 110 >gi|255532071|ref|YP_003092443.1| riboflavin biosynthesis protein RibD [Pedobacter heparinus DSM 2366] gi|255345055|gb|ACU04381.1| riboflavin biosynthesis protein RibD [Pedobacter heparinus DSM 2366] Length = 353 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 59/156 (37%), Gaps = 23/156 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++M LE A A + P VG V V + KII + AHAE+ A Sbjct: 2 TNELYMQRCLELA--AMGMGNVSPNPMVGCVIVSDGKIIGEGYHARFGE----AHAEVNA 55 Query: 59 IRMGCRILSQEILPEVDL---YVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109 I + YV+LEPC CA + RI+++ G ++P G Sbjct: 56 INSVVHNYGNTAETLLAAATAYVSLEPCAHFGKTPPCADLLIKHRIKKVVIGNTDPFDGV 115 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + + E+ G+ E Q+ + FF Sbjct: 116 NGKGIEKLK----NAGIEVVSGVLEAECSQLNRRFF 147 >gi|255320997|ref|ZP_05362170.1| riboflavin biosynthesis protein RibD [Acinetobacter radioresistens SK82] gi|262379913|ref|ZP_06073068.1| riboflavin biosynthesis protein RibD [Acinetobacter radioresistens SH164] gi|255301961|gb|EET81205.1| riboflavin biosynthesis protein RibD [Acinetobacter radioresistens SK82] gi|262298107|gb|EEY86021.1| riboflavin biosynthesis protein RibD [Acinetobacter radioresistens SH164] Length = 362 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + + +M A+E A+ P VG V V + +II + HAE+ A Sbjct: 5 LDQDYFYMRRAIELARLGQYSTKPNPNVGCVIVKDGQIIGEGYHPRAGQ----PHAEVFA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R + YVTLEPC CA A+ +++++ +P Sbjct: 61 LRQAGEQAQ-----DATAYVTLEPCAHYGRTPPCAEALVKHQLKKVVIACPDPNPLVAGK 115 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G A E+ GI E + Q+ F K Sbjct: 116 GIAILKQAG----IEVESGICENEAAQLNCGFLKA 146 >gi|319795234|ref|YP_004156874.1| cmp/dcmp deaminase zinc-binding protein [Variovorax paradoxus EPS] gi|315597697|gb|ADU38763.1| CMP/dCMP deaminase zinc-binding protein [Variovorax paradoxus EPS] Length = 176 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 11/149 (7%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ ++ A+ + A + P G+V V + ++++ A N E D T HAE AIR Sbjct: 20 ERDGRYLRKAIGWSHLARRQGNRPFGSVIVSADGEVLAEAYNNTGETGDCTGHAETNAIR 79 Query: 61 M-GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R +S++ L LY + EPC MCA AI + I R+ +G + Q Sbjct: 80 ALAGRGISRDTLAGATLYASGEPCVMCAGAIFWSNIGRVVFGIDAERLRVFRGERQDQRD 139 Query: 120 ATC---------HHSPEIYPGISEQRSRQ 139 A H E S Sbjct: 140 AELSCRDVFRASPHPIECIGPALLDESAA 168 >gi|253571299|ref|ZP_04848706.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 1_1_6] gi|251839252|gb|EES67336.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 1_1_6] Length = 345 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 20/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ +M +E A+N VGAV V + II + AHAE+ A Sbjct: 1 MEE-EKYMRRCIELAKNGLCNVAPNPMVGAVIVCDGLIIGEGYHIRCGE----AHAEVNA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + + +L +YV+LEPC CA I +I R+ G +P Sbjct: 56 IRS---VKDKSLLSRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSQVAGR 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ E+ R +I+ F Sbjct: 113 GIQKLRDAGR----EVTVGVLEKECRYLIRRF 140 >gi|196014346|ref|XP_002117032.1| hypothetical protein TRIADDRAFT_50979 [Trichoplax adhaerens] gi|190580254|gb|EDV20338.1| hypothetical protein TRIADDRAFT_50979 [Trichoplax adhaerens] Length = 151 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 21/149 (14%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 N +M A E A A + E+PVG V V NKII + N E+K+ T HAE++AI + Sbjct: 9 NEWMEIAFELANEALVAGEVPVGCVLVFGNKIIGKGRNEVNEVKNATRHAEMVAIEEAYK 68 Query: 65 ILSQEI------LPEVDLYVTLEPCTMCAAAISLARIRRL--YYGASNPKGGGIENGTQF 116 L VT+EPC MC+ A+ + YY K I Sbjct: 69 WCENNQVRPSVAFSNSQLLVTVEPCIMCSMALRYLHSEAVGLYY-----KFILITFRLLI 123 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + PG+ +R+ +++ F+ Sbjct: 124 AD--------QTVPGLEAERAVTLLKKFY 144 >gi|237725969|ref|ZP_04556450.1| riboflavin biosynthesis protein ribD [Bacteroides sp. D4] gi|229435777|gb|EEO45854.1| riboflavin biosynthesis protein ribD [Bacteroides dorei 5_1_36/D4] Length = 355 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 19/152 (12%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K ++S L+ A N VGAV V ++ II + AHAE+ A Sbjct: 1 MTKDEKYISRCLQLAHNGLCNTAPNPMVGAVIVYHDTIIGEGYHIRCGE----AHAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + + +L E +YV+LEPC CA I +I ++ G +P Sbjct: 57 IRS---VKDENLLKESTIYVSLEPCSHYGKTPPCADLIIEKKIPKVVIGCMDPFSLVAGR 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ E+ R +I+ F Sbjct: 114 GIEKLRKAG----IEVTVGVLEEECRHLIRRF 141 >gi|212695385|ref|ZP_03303513.1| hypothetical protein BACDOR_04934 [Bacteroides dorei DSM 17855] gi|237711578|ref|ZP_04542059.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 9_1_42FAA] gi|265753006|ref|ZP_06088575.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_33FAA] gi|212662020|gb|EEB22594.1| hypothetical protein BACDOR_04934 [Bacteroides dorei DSM 17855] gi|229454273|gb|EEO59994.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 9_1_42FAA] gi|263236192|gb|EEZ21687.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_33FAA] Length = 355 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 19/152 (12%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K ++S L+ A N VGAV V ++ II + AHAE+ A Sbjct: 1 MTKDEKYISRCLQLAHNGLCNTAPNPMVGAVIVYHDTIIGEGYHIRCGE----AHAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + + +L E +YV+LEPC CA I +I ++ G +P Sbjct: 57 IRS---VKDENLLKESTIYVSLEPCSHYGKTPPCADLIIEKKIPKVVIGCMDPFSLVAGR 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ E+ R +I+ F Sbjct: 114 GIEKLRKAG----IEVTVGVLEEECRHLIRRF 141 >gi|325964675|ref|YP_004242581.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans Sphe3] gi|323470762|gb|ADX74447.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans Sphe3] Length = 164 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 50/119 (42%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 F++ ++ A L + P GA+ V + NR D TAHAE+ AIR CR Sbjct: 8 EQFLARSIRLATANVLNSGGPFGAMIVTADGRAFDGVNRVTADNDPTAHAEVTAIRTACR 67 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 L L LY + EPC MC A+ AR+ R+ + A + + + Sbjct: 68 ELGTFDLSGATLYTSCEPCPMCLASALWARVERVVFAADRHDAASVGFDDAVFYEYFDN 126 >gi|126644134|ref|XP_001388203.1| cytidine and deoxycytidylate deaminase family [Cryptosporidium parvum Iowa II] gi|126117276|gb|EAZ51376.1| cytidine and deoxycytidylate deaminase family, putative [Cryptosporidium parvum Iowa II] Length = 186 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 29/157 (18%) Query: 18 AALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM--------GCRILS 67 A NE+PVG V V +I S A N ++ T H EI+A+ +I + Sbjct: 4 AVKSNEVPVGCVIVNRTTKEIESEAHNETNISRNGTRHCEIVALEKLIVKLKSTSGKINN 63 Query: 68 QEILPE------------------VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 L DL+VT+EPC MC I I ++YG N + GG Sbjct: 64 STRLITQNQDEYSNTRFRINLGDIYDLFVTVEPCIMCIGFIDQMGIHNIFYGCKNYRFGG 123 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + ++ L + GI E S +I+++F++ Sbjct: 124 CGSVLDYHHLNKS-SKIILTSGICENESIKILKEFYE 159 >gi|325662502|ref|ZP_08151105.1| hypothetical protein HMPREF0490_01845 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471198|gb|EGC74423.1| hypothetical protein HMPREF0490_01845 [Lachnospiraceae bacterium 4_1_37FAA] Length = 159 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 1/106 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++ A+E ++ A P GA+ V + +II GN K T HAE Sbjct: 3 QSHEYYLRRAIEISKEARGAGNTPFGALLVNKDGEIIMEQGNIEITEKICTGHAEATLAA 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 S+E L + LY T EPC MCA AI A I R+ YG + + Sbjct: 63 RASHEYSKEYLWDCTLYTTAEPCAMCAGAIYWANIGRVVYGMTERR 108 >gi|94263276|ref|ZP_01287092.1| Guanine deaminase [delta proteobacterium MLMS-1] gi|94266409|ref|ZP_01290105.1| Guanine deaminase [delta proteobacterium MLMS-1] gi|93452981|gb|EAT03477.1| Guanine deaminase [delta proteobacterium MLMS-1] gi|93456359|gb|EAT06483.1| Guanine deaminase [delta proteobacterium MLMS-1] Length = 156 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 39/119 (32%), Positives = 51/119 (42%), Gaps = 1/119 (0%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ + A + R P A+ VL+++II + NR D TAHAEI AIR Sbjct: 2 DDQHFIRQTIALAADHIRRRQGGPFAALVVLDDEIIGQGCNRVTSDNDPTAHAEIEAIRD 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR L LYV EPC MC AA A ++ + Y A I+ Q Sbjct: 62 ACRRRGDFRLTGHTLYVNCEPCPMCLAAAYWADLKEICYAAERRDAAAIDFADQHLYDE 120 >gi|150864126|ref|XP_001382832.2| hypothetical protein PICST_29473 [Scheffersomyces stipitis CBS 6054] gi|149385382|gb|ABN64803.2| tRNA-specific adenosine deaminase subunit [Scheffersomyces stipitis CBS 6054] Length = 276 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 3/143 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVA--VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ L A NE PV + + N+I+S N + T HAE +A++ Sbjct: 11 MAKCLFVGYRALTVNETPVSCLIEDIETNEILSIGYNYTNISLNGTKHAEFIAVKRLRDS 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 +V L V++EPC MCA+ + I + YG SN + GG ++ Sbjct: 71 NLNIDFGKVRLIVSVEPCIMCASFLRQLGIGEVVYGCSNDRFGGNGTVLPIHSDPNLPQE 130 Query: 126 PEI-YPGISEQRSRQIIQDFFKE 147 P Y GI + Q++++F+ + Sbjct: 131 PYCSYGGILRSEAIQLLRNFYIQ 153 >gi|162452397|ref|YP_001614764.1| cytosine/adenosine deaminase [Sorangium cellulosum 'So ce 56'] gi|161162979|emb|CAN94284.1| cytosine/adenosine deaminase [Sorangium cellulosum 'So ce 56'] Length = 163 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 9/149 (6%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DVTAHAEILAI 59 FM A++ + +A +P GAV V +++ + N+ R D TAHAE++ I Sbjct: 10 DAGFMQLAVDASSDALRAGNMPFGAVLVQGGQVLQVSCNQRRTANAGEGDCTAHAEVMLI 69 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY-- 117 R E L +Y + EPC MC+ A+ A + R+ Y AS P + G Sbjct: 70 REATAAHGPEALAGGTVYASGEPCAMCSGALFWAGVSRIVYAASTPDIIAVLGGRALPVR 129 Query: 118 ---TLATCHHSPEIYPGISEQRSRQIIQD 143 LA + + I + + +++ Sbjct: 130 CHEVLANASPAVRVDGPILREAAVALLRS 158 >gi|94265695|ref|ZP_01289434.1| Guanine deaminase [delta proteobacterium MLMS-1] gi|93453781|gb|EAT04153.1| Guanine deaminase [delta proteobacterium MLMS-1] Length = 156 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 39/119 (32%), Positives = 52/119 (43%), Gaps = 1/119 (0%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ + A + R+ P A+ VL+++II + NR D TAHAEI AIR Sbjct: 2 DDQHFIRQTIALAADHIRRHQGGPFAALVVLDDEIIGQGCNRVTSDNDPTAHAEIEAIRD 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 CR L LYV EPC MC AA A ++ + Y A I+ Q Sbjct: 62 ACRRRGDFRLTGHTLYVNCEPCPMCLAAAYWADLKEICYAAERRDAAAIDFADQHLYDE 120 >gi|60680029|ref|YP_210173.1| putative riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacteroides fragilis NCTC 9343] gi|60491463|emb|CAH06213.1| putative riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacteroides fragilis NCTC 9343] Length = 340 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 19/145 (13%) Query: 8 MSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M ++ A+N VGAV V +II + AHAE+ AIR + Sbjct: 1 MRRCIQLAKNGLCNVSPNPMVGAVIVCEGQIIGEGYHIRCGE----AHAEVNAIRS---V 53 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +L +YV+LEPC CA I +I R+ G +P G Q Sbjct: 54 KDPSLLKHSTIYVSLEPCSHHGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGKGIQKLRD 113 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A C E+ G+ E R++I+ F Sbjct: 114 AGC----EVIVGVLETECRELIRKF 134 >gi|87311104|ref|ZP_01093228.1| putative nucleotide deaminase [Blastopirellula marina DSM 3645] gi|87286195|gb|EAQ78105.1| putative nucleotide deaminase [Blastopirellula marina DSM 3645] Length = 162 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 4/138 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+E+A+ + P G ++ ++++ + N + D TAHAE+ A+R+ C+ + Sbjct: 13 MQLAIEKAKQGIAARQSPFGCAIAVDGEVVAVSHNLVLQTVDATAHAEVTALRVACQKVG 72 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS-- 125 + +LP + T EPC MCAAA+ AR+ +YYGA+ + + Sbjct: 73 EILLPRAQVATTCEPCPMCAAALHWARVAEIYYGATIDDAAAAGFNELRVPARSLYEQGG 132 Query: 126 --PEIYPGISEQRSRQII 141 + + R++ Sbjct: 133 SSTRLISDVERAACRELF 150 >gi|325677177|ref|ZP_08156843.1| guanine deaminase [Rhodococcus equi ATCC 33707] gi|325551874|gb|EGD21570.1| guanine deaminase [Rhodococcus equi ATCC 33707] Length = 156 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 45/94 (47%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ ++ A+ P AV V + ++++ + NR + D TAHAEILAIR C L Sbjct: 3 FVQRTIDLARQNVTEGGRPFAAVIVKDGEVLAESPNRVAQTGDPTAHAEILAIRQACTEL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E L +YV PC MC ++ + + Sbjct: 63 GTEHLTGTTIYVLAHPCPMCLGSLYYCSPDEVVF 96 >gi|310827884|ref|YP_003960241.1| riboflavin biosynthesis protein RibD [Eubacterium limosum KIST612] gi|308739618|gb|ADO37278.1| riboflavin biosynthesis protein RibD [Eubacterium limosum KIST612] Length = 367 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 43/155 (27%), Positives = 56/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M ALEEA + VGAV V N +I R + HAE AI Sbjct: 2 NDQDYMRLALEEAWKGCGFVNPNPMVGAVIVKNGCVIGRGAHERYGG----PHAERNAI- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E L + LYVTL PC C + IRR+ G+ +P E Sbjct: 57 ----AHCTEDLQDATLYVTLTPCCHFGKTPPCTDVVLENGIRRVVIGSHDPNPLVAEKSI 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + H E+ GI +Q + FF R Sbjct: 113 EILRQ----HGVEVTTGILQQECDALNDAFFHFIR 143 >gi|294784869|ref|ZP_06750157.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 3_1_27] gi|294486583|gb|EFG33945.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 3_1_27] Length = 369 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 60/155 (38%), Gaps = 25/155 (16%) Query: 2 KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 +M+ A+E A+ + P VGAV V + KII ++ HAE+ Sbjct: 4 NSDEKYMARAIELAKRG--TGGVNPNPLVGAVIVKDGKIIGEGWHKKFGG----PHAEVW 57 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ E +YVTLEPC CA I A I+R +P Sbjct: 58 ALNEAG-----ENAKGATVYVTLEPCSHQGKTPPCAKRIIEAGIKRCVVACIDPNPLVAG 112 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + + E+ G+ E+ ++ + + F K Sbjct: 113 KGMKIIE----NAGIEVELGVLEKEAKDVNKIFLK 143 >gi|265765179|ref|ZP_06093454.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_16] gi|263254563|gb|EEZ25997.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_16] Length = 340 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 19/145 (13%) Query: 8 MSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M ++ A+N VGAV V +II + AHAE+ AIR + Sbjct: 1 MRRCIQLAKNGLCNVSPNPMVGAVIVCEGQIIGEGYHIRCGE----AHAEVNAIRS---V 53 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +L +YV+LEPC CA I +I R+ G +P G Q Sbjct: 54 KDPSLLKHSTIYVSLEPCSHHGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGKGIQKLRD 113 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A C E+ G+ E R++I+ F Sbjct: 114 AGC----EVIVGVLETECRELIRKF 134 >gi|327278242|ref|XP_003223871.1| PREDICTED: tRNA-specific adenosine deaminase-like protein 3-like [Anolis carolinensis] Length = 353 Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 16/146 (10%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMG 62 M A++ AQ A + PVGAV V K+++ R+ + H Sbjct: 211 QYHMELAIQAAQQGAKQGMRPVGAVVVDPSSGKVLAVGH-DCRDGLNPIDH-------QS 262 Query: 63 CRILSQ-----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 I D+Y+T EPC MCA ++ +RI R++YG +P G + + Sbjct: 263 GHSSPSTNGLPYICTGYDMYLTREPCAMCAMSLVHSRIERVFYGVPSP-HGALGTALHIH 321 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQD 143 + +H E++ G+ E R R + Q+ Sbjct: 322 SRRDLNHRYEVFRGVLEGRCRSLEQE 347 >gi|253564134|ref|ZP_04841591.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_2_5] gi|251947910|gb|EES88192.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_2_5] gi|301161570|emb|CBW21110.1| putative riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacteroides fragilis 638R] Length = 340 Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 19/145 (13%) Query: 8 MSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M ++ A+N VGAV V +II + AHAE+ AIR + Sbjct: 1 MRRCIQLAKNGLCNVSPNPMVGAVIVCEGQIIGEGYHIRCGE----AHAEVNAIRS---V 53 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +L +YV+LEPC CA I +I R+ G +P G Q Sbjct: 54 KDPSLLKHSTIYVSLEPCSHHGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGKGIQKLRD 113 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A C E+ G+ E R++I+ F Sbjct: 114 AGC----EVIVGVLEPECRELIRKF 134 >gi|258647712|ref|ZP_05735181.1| riboflavin biosynthesis protein RibD [Prevotella tannerae ATCC 51259] gi|260852547|gb|EEX72416.1| riboflavin biosynthesis protein RibD [Prevotella tannerae ATCC 51259] Length = 322 Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 64/154 (41%), Gaps = 19/154 (12%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M+ +++M L A+N L P VGAV V ++II + K AHAE+ Sbjct: 1 MEIKDIYMHRCLRLAENGRLSA-PPNPMVGAVIVYKDRIIGEGYHA----KCGQAHAEVN 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AI R + L + LYV+LEPC CA I I R+ G +P Sbjct: 56 AI-ASVRPDDRPHLQDSTLYVSLEPCAHYGRTPPCARLILNTGIPRVVVGCEDPFDKVEG 114 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G ++ G+ EQ R++ + FF Sbjct: 115 RGITMLRDGG----VQVTVGVLEQECRELNRHFF 144 >gi|256827880|ref|YP_003156608.1| riboflavin biosynthesis protein RibD [Desulfomicrobium baculatum DSM 4028] gi|256577056|gb|ACU88192.1| riboflavin biosynthesis protein RibD [Desulfomicrobium baculatum DSM 4028] Length = 374 Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 56/153 (36%), Gaps = 20/153 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M + FM A+ A+ R P VGAV ++++ + HAE+ Sbjct: 1 MHEDCAFMDQAIRLAEQGRGRT-APNPCVGAVLTRGGEVVAEGWHT--ACGQP--HAEVE 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+R LYVTLEPC C AI A + + G ++P Sbjct: 56 ALRDAQAKGVDPR--GCTLYVTLEPCNHQGKTPPCTRAILEAGVPEVVVGCADPNPTVAG 113 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G F + G+ EQ R +I DF Sbjct: 114 GGADFLRGRG----VTVRMGVREQECRDLIADF 142 >gi|218531388|ref|YP_002422204.1| CMP/dCMP deaminase zinc-binding [Methylobacterium chloromethanicum CM4] gi|218523691|gb|ACK84276.1| CMP/dCMP deaminase zinc-binding [Methylobacterium chloromethanicum CM4] Length = 153 Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 32/99 (32%), Positives = 50/99 (50%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M ++ A E A P GAV V + +++ RA NR D + HAE++AIR Sbjct: 1 MPDHESYLREATEIALANVAEGGRPYGAVIVRDGEVVVRAANRIHATNDPSDHAEMVAIR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 + L + L + +Y + PC MC AA+ LA +++ Y Sbjct: 61 AASQQLGRPKLDDCIVYASGRPCPMCHAAMRLAGVKQGY 99 >gi|325964826|ref|YP_004242732.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans Sphe3] gi|323470913|gb|ADX74598.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans Sphe3] Length = 164 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 14/137 (10%) Query: 9 SCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 A + AQ +A IP+GA +I+ N + D AH E+ A+R R Q Sbjct: 22 EAAYQAAQKSAGEGGIPIGAALARGGVVIAAGHNERVQKGDPIAHGEMSALRAAGR---Q 78 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 + + LY TL PC MC I +I R+ G + GG E E+ Sbjct: 79 KSYRDTTLYTTLAPCAMCTGTIIQFKIPRVVVGEARTFGGEFE----LLRSRG----VEV 130 Query: 129 YPGISEQ-RSRQIIQDF 144 + + R ++Q F Sbjct: 131 V--VLDDQRCVDMMQTF 145 >gi|53711798|ref|YP_097790.1| riboflavin biosynthesis protein RibD [Bacteroides fragilis YCH46] gi|52214663|dbj|BAD47256.1| riboflavin biosynthesis protein RibD [Bacteroides fragilis YCH46] Length = 340 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 19/145 (13%) Query: 8 MSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M ++ A+N VGAV V +II + AHAE+ AIR + Sbjct: 1 MRRCIQLAKNGLCNVSPNPMVGAVIVCEGQIIGEGYHIRCGE----AHAEVNAIRS---V 53 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +L +YV+LEPC CA I +I R+ G +P G Q Sbjct: 54 KDPSLLKHSTIYVSLEPCSHHGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGKGIQKLRD 113 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A C E+ G+ E R++I+ F Sbjct: 114 AGC----EVIVGVLETECRELIRKF 134 >gi|255655719|ref|ZP_05401128.1| riboflavin biosynthesis protein [Clostridium difficile QCD-23m63] gi|296451726|ref|ZP_06893457.1| riboflavin biosynthesis protein RibD [Clostridium difficile NAP08] gi|296878970|ref|ZP_06902968.1| riboflavin biosynthesis protein RibD [Clostridium difficile NAP07] gi|296259427|gb|EFH06291.1| riboflavin biosynthesis protein RibD [Clostridium difficile NAP08] gi|296429997|gb|EFH15846.1| riboflavin biosynthesis protein RibD [Clostridium difficile NAP07] Length = 370 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +K +M A+E A+N N P VG V V ++ II + + HAE+ AI Sbjct: 8 EKDIYYMKKAIELAKNGEGFVNPNPLVGCVIVKDDYIIGKGYHEKFGSN----HAEVNAI 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + L + LYV LEPC C I +I+R+ +P NG Sbjct: 64 NSAKQ-----SLKDSTLYVNLEPCSHYGKTPPCVDKIIQNKIKRVVISTLDPNPLVCGNG 118 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + ++ G E+ +R + + FF K +R Sbjct: 119 VKKLRDNN----IDVTVGTLEEEARDLNEVFFYYIKNKR 153 >gi|225620931|ref|YP_002722189.1| riboflavin biosynthesis protein RibD [Brachyspira hyodysenteriae WA1] gi|225215751|gb|ACN84485.1| riboflavin biosynthesis protein RibD [Brachyspira hyodysenteriae WA1] Length = 360 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 29/157 (18%) Query: 8 MSCALEEAQNAALRNEI-----P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M A+EEA+ E P VGAV V + K+I ++ HAEI A Sbjct: 1 MKMAIEEAKK----GEGFTSPNPLVGAVIVKDGKVIGIGYHKKCGEN----HAEINAFLD 52 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E + + D+YVTLEPC CA AI +++R+ G + NG + Sbjct: 53 A--KEKGENVEDADIYVTLEPCSHYGKTPPCADAIIKNKLKRVIIGCVDSNPKVAGNGIK 110 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 A E+ + E+ R++ + FF +R Sbjct: 111 KLKDAG----IEVIVNVLEEECRKLNEVFFYYIANKR 143 >gi|317497909|ref|ZP_07956219.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium 5_1_63FAA] gi|316894890|gb|EFV17062.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium 5_1_63FAA] Length = 366 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 62/153 (40%), Gaps = 23/153 (15%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 MK +M A+E A+ N P VGAV V + K+I + HAE A Sbjct: 1 MK--EEYMRRAIELAKKGCGYTNPNPLVGAVIVKDQKVIGEGYHEKIGGL----HAERNA 54 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++ E ++YVTLEPC C A+ A I+++Y G +P Sbjct: 55 LKN-----CIEDPKGAEIYVTLEPCCHYGKTPPCTEALIEAGIKKVYVGNLDPNPKVAGG 109 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + H E GI E+ RQ+ FF Sbjct: 110 GIKILND----HGIETETGILEEECRQLNDIFF 138 >gi|268589808|ref|ZP_06124029.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131] gi|291314796|gb|EFE55249.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131] Length = 157 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 4/132 (3%) Query: 20 LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 + P GAV V +N+++ N D T HAE+ IR C L E LY + Sbjct: 24 KKGNEPFGAVLVKDNQVVMTGENHIHTESDPTYHAELGLIRQYCSEHKIMNLSEYTLYTS 83 Query: 80 LEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATC---HHSPEIYPGISEQ 135 EPC MC+ A+ ++ R+ Y S + + P + G+ ++ Sbjct: 84 CEPCCMCSGAMVWCQLGRMVYSLSHDELAEIAGFNIMLGSDEIFAKSPFKPAVTHGVLKE 143 Query: 136 RSRQIIQDFFKE 147 ++ I +F+ Sbjct: 144 KAMLIYTQYFQA 155 >gi|298386833|ref|ZP_06996388.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 1_1_14] gi|298260507|gb|EFI03376.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 1_1_14] Length = 345 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 20/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ +M +E A+N VGAV V + II + AHAE+ A Sbjct: 1 MEE-EKYMRRCIELAKNGLCNVAPNPMVGAVIVCDGLIIGEGYHIRCGE----AHAEVNA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + + +L +YV+LEPC CA I +I R+ G +P Sbjct: 56 IRS---VKDKSLLSRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSQVAGR 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ E+ R +I+ F Sbjct: 113 GIQKLRDAGR----EVTIGVLEKECRYLIRRF 140 >gi|262066887|ref|ZP_06026499.1| riboflavin biosynthesis protein RibD [Fusobacterium periodonticum ATCC 33693] gi|291379396|gb|EFE86914.1| riboflavin biosynthesis protein RibD [Fusobacterium periodonticum ATCC 33693] Length = 369 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 42/158 (26%), Positives = 63/158 (39%), Gaps = 27/158 (17%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHA 54 M+K FM+ A+E A + P VGAV V + KII ++ HA Sbjct: 1 MEKTVDEKFMARAIELAFKGL--GGVNPNPLVGAVVVKDGKIIGEGWHKKYGG----PHA 54 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108 E+ A+ E +YVTLEPC CA I A I+R +P Sbjct: 55 EVWALNEAG-----EEAKGATIYVTLEPCSHQGKTPPCAKRIVEAGIKRCVIACIDPNPL 109 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A ++ GI E+ ++++ + F K Sbjct: 110 VAGKGIKIIEDAG----IKVDFGILEKEAKEVNKVFLK 143 >gi|302392186|ref|YP_003828006.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase ;5-amino-6-(5-phosphoribosylamino)uracil reductase [Acetohalobium arabaticum DSM 5501] gi|302204263|gb|ADL12941.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase ;5-amino-6-(5-phosphoribosylamino)uracil reductase [Acetohalobium arabaticum DSM 5501] Length = 371 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 21/153 (13%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M AL+ A R P VGAV V + +I+ + + HAE+ A+ Sbjct: 5 NRDIDYMRLALDLAAKGRGRTSPNPMVGAVIVKDGEIVGQGYHHAAGK----PHAEVNAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + + +YVTLEPC C A+ A + R+ +P G Sbjct: 61 QDAADKT-----EDATVYVTLEPCSHYGKTPPCTKALIGAGVSRVVAAMKDPNPKVAGRG 115 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q A E+ G+ E+ ++++ + F K Sbjct: 116 LQKLADAG----IEVESGLLEEEAKELNEAFIK 144 >gi|262405149|ref|ZP_06081699.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_22] gi|262356024|gb|EEZ05114.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_22] Length = 351 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 20/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ +M +E A+N VGAV V + +II + AHAE+ A Sbjct: 7 MEE-EKYMRRCIELAKNGLCNVSPNPMVGAVIVCDGRIIGEGYHIRCGE----AHAEVNA 61 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + + +L +YV+LEPC CA I +I R+ G +P Sbjct: 62 IHS---VKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGR 118 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ E+ + +I+ F Sbjct: 119 GIQKLRDAGR----EVSVGVLEEECKSLIRRF 146 >gi|290993580|ref|XP_002679411.1| purine deaminase [Naegleria gruberi] gi|284093027|gb|EFC46667.1| purine deaminase [Naegleria gruberi] Length = 203 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 61/162 (37%), Gaps = 20/162 (12%) Query: 4 GNVFMSCALEEAQNA-ALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR 60 M A++ ++ + P GA+ + N N+II A N D T HAE+ Sbjct: 42 HEKLMKRAIDLSKESCNDHGNHPFGALLIDNDTNEIILEAHNTVHTENDRTRHAELNLSS 101 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS---------------NP 105 M + ++ L +Y + EPC MCA AI I ++ Y N Sbjct: 102 MASKKYPRDYLTNCTMYTSTEPCIMCAGAIFWVGIGKVVYACPASRLREIVRRKQDGNNL 161 Query: 106 KGGGIENGT--QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 K G + + + + + I E+ + + + ++ Sbjct: 162 KNSGSLTIACREIFEERSEGLNIPLIGPIMEEEAAAVHESYW 203 >gi|260495221|ref|ZP_05815349.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 3_1_33] gi|260197278|gb|EEW94797.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 3_1_33] Length = 369 Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 60/155 (38%), Gaps = 25/155 (16%) Query: 2 KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 +M+ A+E A+ + P VGAV V + KII ++ HAE+ Sbjct: 4 NSDEKYMARAIELAKRG--TGSVNPNPLVGAVVVKDGKIIGEGWHKKYGG----PHAEVW 57 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ E +YVTLEPC CA I A I+R +P Sbjct: 58 ALNEAG-----ENAKGATIYVTLEPCSHQGKTPPCAKRIVEAGIKRCVVACIDPNPLVAG 112 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A E+ G+ E+ ++ + + F K Sbjct: 113 KGIKIIEDAG----IEVKLGVLEKEAKDVNKIFLK 143 >gi|311030745|ref|ZP_07708835.1| riboflavin biosynthesis protein RibD [Bacillus sp. m3-13] Length = 367 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 22/152 (14%) Query: 3 KGNVFMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M A++ A+ A + N + VG+V V N +I+ + AHAE+ AI Sbjct: 2 DDQYYMKFAIDLAKRATGQTSPNPV-VGSVVVKNGEIVGFGAHLRAGE----AHAEVNAI 56 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 +M + +YVTLEPC C+ + +++ R+ +++P G Sbjct: 57 QMA----GVDKANGSTVYVTLEPCSHFGKTPPCSDLLIQSQVSRVVIASTDPNPLVAGRG 112 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A E+ G+ E+ + + Q FF Sbjct: 113 IEKLRKAG----IEVELGVCEEEALALNQVFF 140 >gi|266622681|ref|ZP_06115616.1| putative cytosine deaminase [Clostridium hathewayi DSM 13479] gi|288865589|gb|EFC97887.1| putative cytosine deaminase [Clostridium hathewayi DSM 13479] Length = 160 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 1/106 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++ A+E ++ A P GA+ V + I+ GN K T HAE Sbjct: 4 QSHEYYLRRAIEISKEARAAGNTPFGALLVNKDGDIVMEQGNIEITDKICTGHAEATLAA 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 +++ L + LY T EPC MCA AI A I R+ YG + + Sbjct: 64 RASHEFTKDYLWDCTLYTTAEPCAMCAGAIYWANIGRVVYGMTERR 109 >gi|225028184|ref|ZP_03717376.1| hypothetical protein EUBHAL_02456 [Eubacterium hallii DSM 3353] gi|224954496|gb|EEG35705.1| hypothetical protein EUBHAL_02456 [Eubacterium hallii DSM 3353] Length = 411 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 18/149 (12%) Query: 5 NVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A+E A+ + N P VGAV V + +II + HAE AI Sbjct: 4 EKYMRRAIELAKKGSGHVNPNPLVGAVIVKDGEIIGEGYHECYGQL----HAERNAIANA 59 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + + + +YVTLEPC C AI +I R+ G+ +P G + Sbjct: 60 RKRGNN--IEGSTIYVTLEPCCHYGKTPPCTEAIIEEKIARVVVGSDDPNPLVSGKGFKL 117 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145 E+ P ++ + FF Sbjct: 118 LREKG----IEVIPHFLKEECDAMNHVFF 142 >gi|282883344|ref|ZP_06291938.1| riboflavin biosynthesis protein RibD [Peptoniphilus lacrimalis 315-B] gi|281296848|gb|EFA89350.1| riboflavin biosynthesis protein RibD [Peptoniphilus lacrimalis 315-B] Length = 372 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 18/151 (11%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +MS A++ A+ VG V V +++II R ++ HAE +AI Sbjct: 6 DYRSYMSLAMDLAEKGKGFTLTNPMVGCVIVNDDRIIGRGYHKKFGDL----HAETMAIE 61 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + + E L LYV LEPC C AI +I+++ +P G Sbjct: 62 DAQK--NGESLEGSTLYVNLEPCCHYGKQPPCTKAIIENKIKKVVIANVDPNKKVSGKGI 119 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A E+ GI E+ ++ ++FF Sbjct: 120 KTLEDAG----IEVVEGIMEEEGLKLNEEFF 146 >gi|237715308|ref|ZP_04545789.1| riboflavin biosynthesis protein ribD [Bacteroides sp. D1] gi|294643551|ref|ZP_06721357.1| riboflavin biosynthesis protein RibD [Bacteroides ovatus SD CC 2a] gi|294807058|ref|ZP_06765877.1| riboflavin biosynthesis protein RibD [Bacteroides xylanisolvens SD CC 1b] gi|229444617|gb|EEO50408.1| riboflavin biosynthesis protein ribD [Bacteroides sp. D1] gi|292641126|gb|EFF59338.1| riboflavin biosynthesis protein RibD [Bacteroides ovatus SD CC 2a] gi|294445757|gb|EFG14405.1| riboflavin biosynthesis protein RibD [Bacteroides xylanisolvens SD CC 1b] Length = 345 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 20/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ +M +E A+N VGAV V + +II + AHAE+ A Sbjct: 1 MEE-EKYMRRCIELAKNGLCNVSPNPMVGAVIVCDGRIIGEGYHIRCGE----AHAEVNA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + + +L +YV+LEPC CA I +I R+ G +P Sbjct: 56 IHS---VKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGR 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ E+ + +I+ F Sbjct: 113 GIQKLRDAGR----EVSVGVLEEECKSLIRRF 140 >gi|18309548|ref|NP_561482.1| riboflavin biosynthesis protein RibD [Clostridium perfringens str. 13] gi|18144225|dbj|BAB80272.1| riboflavin biosynthesis protein [Clostridium perfringens str. 13] Length = 366 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM ALE A+ N P VGAV V + +II + + HAEI AI Sbjct: 2 DEFFMKKALELARKGEGYVNPNPLVGAVIVKDGEIIGQGYHEFFGGN----HAEINAINS 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + +YVTLEPC C AI + +R+ G +P G + Sbjct: 58 SIKST-----EGATIYVTLEPCCHYGKTPPCVEAIIKNKFKRVVVGTLDPNPLVSGKGIK 112 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + E+ G+ E+ ++ + F Sbjct: 113 ILRESG----IEVKVGVLEKECIRLNEIF 137 >gi|239820133|ref|YP_002947318.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110] gi|239804986|gb|ACS22052.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110] Length = 158 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 1/104 (0%) Query: 5 NVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A+ A +N R P GAV V K+++RA N L D TAHAE+ A+RM Sbjct: 9 EKYMLDAIRLAMRNVRERRTWPFGAVLVREGKVLARAVNEVDALCDPTAHAEMQAVRMAA 68 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 + L +Y + PC MC A+ LA ++ + Y SN G Sbjct: 69 KAQGGTDLSGSVVYASGYPCPMCLTAMFLAGVKEVCYAYSNEDG 112 >gi|67464318|pdb|1YSB|A Chain A, Yeast Cytosine Deaminase Triple Mutant gi|67464319|pdb|1YSB|B Chain B, Yeast Cytosine Deaminase Triple Mutant Length = 161 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 13/150 (8%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59 K M A EEA +P+G + + ++ R N + T H EI + Sbjct: 12 KWDQKGMDIAYEEALLGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL 71 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYT 118 R+ ++ + LY TL PC MC AI + I R G + N K G + Sbjct: 72 ENCGRLEG-KVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVIGENVNFKSKGEK------Y 124 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148 L T H + + ++R +++++ F ER Sbjct: 125 LQTRGHEVVV---VDDERCKKLMKQFIDER 151 >gi|212223758|ref|YP_002306994.1| riboflavin biosynthesis protein RibD [Thermococcus onnurineus NA1] gi|212008715|gb|ACJ16097.1| riboflavin biosynthesis protein RibD [Thermococcus onnurineus NA1] Length = 361 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 43/156 (27%), Positives = 61/156 (39%), Gaps = 22/156 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M + FM ALE A+ + P VGAV V + ++I +R K HAEI Sbjct: 2 MDEDKKFMHLALELAKRG--EGWVNPNPMVGAVIVKDGEVIGVGWHRKFGEK----HAEI 55 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 AI LYVTLEPC CA I +R+ +P Sbjct: 56 NAIEDAKDRGHDTR--GATLYVTLEPCSHWGKQPPCADRIIAEGFKRVVVAMKDPHSLVA 113 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A E+ GI E+ ++++ + F K Sbjct: 114 GRGIEKMQRAG----IEVDVGILEEEAKKLNEIFIK 145 >gi|120435954|ref|YP_861640.1| cytidine/deoxycytidylate deaminase family protein [Gramella forsetii KT0803] gi|117578104|emb|CAL66573.1| cytidine/deoxycytidylate deaminase family protein [Gramella forsetii KT0803] Length = 149 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 1/97 (1%) Query: 8 MSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 MS A++ A+ N P GAV ++II+ + N+ +D T HAE+ AI+ CR L Sbjct: 11 MSRAIDLAREGRDMDNGGPFGAVITKGDEIIAESCNKVLAKEDCTEHAELRAIQKACRKL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + L L+ + EPC MC A A +YYGAS Sbjct: 71 NSSSLQGCVLFTSCEPCMMCLGAAYWADFDNIYYGAS 107 >gi|146308871|ref|YP_001189336.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pseudomonas mendocina ymp] gi|145577072|gb|ABP86604.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pseudomonas mendocina ymp] Length = 371 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 58/154 (37%), Gaps = 21/154 (13%) Query: 2 KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ ++FM+ AL A+ VG V V + +I+ + HAE+ A+ Sbjct: 3 ERDHLFMARALRLARKGLYSTHPNPRVGCVIVRDGEIVGEGWHARAGE----PHAEVHAL 58 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R E YVTLEPC CA A+ A + R+ +P G Sbjct: 59 RQAG-----ERARGATAYVTLEPCSHHGRTPPCADALVAAGVGRVVAAMQDPNPQVAGRG 113 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + E+ G+ E +R + F K Sbjct: 114 L----LRLANAGIEVLSGVLEAEARALNVGFIKR 143 >gi|50303913|ref|XP_451904.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641036|emb|CAH02297.1| KLLA0B08437p [Kluyveromyces lactis] Length = 152 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 54/149 (36%), Gaps = 11/149 (7%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAI 59 + M A EEA +P+G + N +I+ N + T H E + Sbjct: 3 EWDKKGMDKAYEEAAIGYKEGGVPIGGCLIDNLTGEILGSGHNMRFQKGSPTLHGETSTL 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R+ + +Y TL PC MC AI L I R+ G G ++ Sbjct: 63 ENAGRLKGS-VYKHCTMYTTLSPCDMCTGAILLYGIGRVVVG---ENVNFKSPGEKYLAE 118 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + ++R +I++DF +R Sbjct: 119 RGIEVKV-----VDDERCIEIMKDFIAKR 142 >gi|322807186|emb|CBZ04760.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Clostridium botulinum H04402 065] Length = 365 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 42/156 (26%), Positives = 63/156 (40%), Gaps = 25/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M+ N +M AL+ A+ ++ P VGA+ V NNKII ++ HAE+ Sbjct: 1 MEDYNFYMEKALKLAERG--EGKVNPNPKVGAIVVKNNKIIGEGYHKYFGG----PHAEV 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+R E +YVTLEPC CA +I I + +P Sbjct: 55 YALREAG-----ERAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVE 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G E+ GI E+ S+++ + F K Sbjct: 110 GRGIDILKQNG----IEVVTGIMEKESKKLNEVFIK 141 >gi|306820099|ref|ZP_07453747.1| riboflavin biosynthesis protein RibD [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551877|gb|EFM39820.1| riboflavin biosynthesis protein RibD [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 365 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 21/150 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A++ A+N R P VGAV V +N+II R + AHAE+ A+ Sbjct: 6 DKKYMKLAIDLAKNGIGRTSPNPIVGAVIVKDNQIIGRGWHEKYGE----AHAEVNALDN 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 C++ +YVTLEPC C + I + I + G+ +P G+Q Sbjct: 62 -CQVSPN----GATMYVTLEPCCHFGKQPPCTSKIIESGISHVVIGSFDPNPQVSGKGSQ 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + ++ + ++ ++ FF Sbjct: 117 ILK----NSEIKVTQSVLQRECDELNTVFF 142 >gi|300775167|ref|ZP_07085029.1| riboflavin biosynthesis protein RibD [Chryseobacterium gleum ATCC 35910] gi|300505907|gb|EFK37043.1| riboflavin biosynthesis protein RibD [Chryseobacterium gleum ATCC 35910] Length = 341 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 24/161 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M +++ +E AQ A + P VG+V V N +II + HAEI Sbjct: 1 MNNDELYIKRCIELAQKALGKT-YPNPLVGSVIVHNGEIIGEGYHHKAGEN----HAEIN 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AI + +++++PE +YV+LEPC CA I +++ GA + Sbjct: 56 AINS---VKNKDLIPESTIYVSLEPCAHYGKTPPCALKIRELGFKKVVIGAMDSHDKVNG 112 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 G + A E GI E+ ++ + FF +++R Sbjct: 113 KGKKIIQEAG----IEAVSGILEKECIELNKRFFTYHEKKR 149 >gi|164687268|ref|ZP_02211296.1| hypothetical protein CLOBAR_00909 [Clostridium bartlettii DSM 16795] gi|164603692|gb|EDQ97157.1| hypothetical protein CLOBAR_00909 [Clostridium bartlettii DSM 16795] Length = 370 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 21/152 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ N +M ALE A+ N P VG + V + K+I + HAE+ AI Sbjct: 8 QEDNYYMKKALELAKLGIGAVNPNPLVGCIIVKDGKVIGEGYHMKFGE----PHAEVNAI 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 +E + +YVTLEPC CA + +++R+ ++P NG Sbjct: 64 NSA-----KEDIEGATVYVTLEPCSHFGKTPPCADNLVRHKVKRVVICNNDPNPLVAGNG 118 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + + E+ GI E+ ++ + FF Sbjct: 119 IKKLQ----NAGIEVTTGILEEEGLKLNEVFF 146 >gi|222480528|ref|YP_002566765.1| CMP/dCMP deaminase zinc-binding [Halorubrum lacusprofundi ATCC 49239] gi|222453430|gb|ACM57695.1| CMP/dCMP deaminase zinc-binding [Halorubrum lacusprofundi ATCC 49239] Length = 174 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 4/142 (2%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 ++ A+E A+ A P GA+ VL+ +I++ A N D+ AH E+ R Sbjct: 25 SDRKYVDRAIELAEEAVEMGNTPFGALLVLDGEIVAEAHNETLTEDDLAAHPELALARWA 84 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS----NPKGGGIENGTQFYT 118 R L + +Y + EPC MCA I A I R+ +G + + G + Sbjct: 85 GRELDVDERARCTMYASTEPCPMCATGIHYAGIGRVVFGVAGETLDGLTGDAVSIPCAEV 144 Query: 119 LATCHHSPEIYPGISEQRSRQI 140 + + I+E + ++ Sbjct: 145 IRRAGGDTTVEGPIAEAAAMEL 166 >gi|195953373|ref|YP_002121663.1| CMP/dCMP deaminase zinc-binding [Hydrogenobaculum sp. Y04AAS1] gi|195932985|gb|ACG57685.1| CMP/dCMP deaminase zinc-binding [Hydrogenobaculum sp. Y04AAS1] Length = 147 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 45/141 (31%), Positives = 69/141 (48%), Gaps = 7/141 (4%) Query: 9 SCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 LE + A ++ IPV A+ N++I+S A N + HAEILAI +L+ Sbjct: 8 QKLLELCKEAIAQDRIPVSALVTKNDEIVSWAFNGIKS----IEHAEILAIEKAMNVLNT 63 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 + L D+YV+LEPC MC AISLARI ++Y+ + + K G I + E Sbjct: 64 KRLDGCDIYVSLEPCPMCTYAISLARIEKVYFFSLDDKNGAILSNANIIDKFELKLKWEY 123 Query: 129 YPGISEQRSRQIIQDFFKERR 149 +++ +FK +R Sbjct: 124 KKN---ADFENMLKGYFKNKR 141 >gi|19076024|ref|NP_588524.1| cytosine deaminase (predicted) [Schizosaccharomyces pombe 972h-] gi|74626752|sp|O59834|FCYS_SCHPO RecName: Full=Probable cytosine deaminase; AltName: Full=Cytosine aminohydrolase gi|3136043|emb|CAA19074.1| cytosine deaminase (predicted) [Schizosaccharomyces pombe] Length = 162 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 17/156 (10%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 +K ++ A++ +Q A + P G + V N+ +I AGNR DVT HAE A+ Sbjct: 8 EKDLAYLREAIKVSQQARDEGQHPFGCIIVDENDNVIMSAGNRV-PDGDVTQHAETRAV- 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP-------KGGGI--- 110 G ++ L + LY + EPC MC+ AI + IRR+ +G SN K G Sbjct: 66 -GLITKTRRDLEKCTLYTSTEPCAMCSGAIFWSGIRRMIFGLSNENLIKLTQKSGECPPL 124 Query: 111 -ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 N A+ H E+ E + + F+ Sbjct: 125 YINSRDILGAAS--HPIEVVGPYIEDEAIIPHKGFW 158 >gi|283781867|ref|YP_003372622.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM 6068] gi|283440320|gb|ADB18762.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM 6068] Length = 157 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 43/153 (28%), Positives = 63/153 (41%), Gaps = 16/153 (10%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A+E A++ P GAV V + KII+ N++ + T H EI+A+ Sbjct: 13 DESYMRAAIELARHVPQL---PFGAVIVDRSSGKIIAGGFNQSAM--NPTWHGEIVALND 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFYTLA 120 + + P + LY T EPC MC AI ++I L YG S Sbjct: 68 LAQRGLHDR-PSLALYTTAEPCPMCMGAILWSQIEELIYGTSIRFLQQTGWRQIDILASE 126 Query: 121 TCHHSP----EIYPGISEQRSRQIIQDFFKERR 149 SP I PG+ E+ + F + RR Sbjct: 127 VLARSPLGKCTIVPGVLEEECNAL---FVEARR 156 >gi|327399584|ref|YP_004340453.1| riboflavin biosynthesis protein RibD [Hippea maritima DSM 10411] gi|327182213|gb|AEA34394.1| riboflavin biosynthesis protein RibD [Hippea maritima DSM 10411] Length = 375 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 22/156 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M K +FM A+E A+ A + P VGAV V KII + ++ L HAE+ Sbjct: 13 MNKDELFMKKAIELAKKAKNKT-CPNPLVGAVIVKEGKIIGQGYHKKAGL----PHAEVE 67 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AI + + L + +YV LEPC C+ AI + I+R+ G + Sbjct: 68 AINS---VKDRNQLKDATIYVNLEPCNHYGRTPPCSLAIINSGIKRVVIGMRDINKKASG 124 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + ++ G+ E ++++ + F + Sbjct: 125 GIERLKGA-----GIDVKVGVLEDEAKKLNEVFIEN 155 >gi|76798747|ref|ZP_00780965.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae 18RS21] gi|76585902|gb|EAO62442.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae 18RS21] Length = 362 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 25/147 (17%) Query: 8 MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M+ AL+EA+ + P VGAV V +++IIS+ ++ HAE AI+ Sbjct: 1 MALALKEAEKGM--GFVAPNPLVGAVIVKDDRIISKGYHKRFGDL----HAERQAIKNA- 53 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 E + LYVTLEPC C A+ + I+++ G+ +P G Sbjct: 54 ----DEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDPNPLVSGKGIALL 109 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 + + GI + + + F Sbjct: 110 RKEGLN----VEVGILREECDALNERF 132 >gi|114566748|ref|YP_753902.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337683|gb|ABI68531.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 367 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 42/153 (27%), Positives = 58/153 (37%), Gaps = 20/153 (13%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 FM ALE A A R P VGAV V + +I+ ++ T HAEI A+ Sbjct: 4 NDDQRFMQRALELAARARGRTSPNPLVGAVLVKDGQILGEGYHQRA----GTPHAEINAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R E +YV LEPC CA A+ A + + +P G Sbjct: 60 NTAGR----ERAKGASIYVNLEPCSHYGRTAPCALALVEAGVAEVVIATLDPNPQVSGRG 115 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q A G+ +R++ + FFK Sbjct: 116 VQILQEAGIKTRV----GVLTAEARELNEFFFK 144 >gi|328883182|emb|CCA56421.1| Cytosine deaminase [Streptomyces venezuelae ATCC 10712] Length = 168 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 15/141 (10%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +++ AL EA+ +PVGA + ++ R NR + D +AHAE A R R Sbjct: 26 QWLATALAEARAGRDEGGVPVGAALYGADGALLGRGHNRRVQDGDPSAHAETAAFRAAGR 85 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 S + TL PC C+ + I R+ G + GG + + H Sbjct: 86 QRS---YRGTTMVTTLSPCWYCSGLVRQFGISRVVVGEAETFHGGHDWLAE--------H 134 Query: 125 SPEIYPGISEQ-RSRQIIQDF 144 E+ + + ++++F Sbjct: 135 GVEVL--VLDDPECAALMREF 153 >gi|291521186|emb|CBK79479.1| Cytosine/adenosine deaminases [Coprococcus catus GD/7] Length = 159 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 1/107 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M+ ++ A+E + + P A+ V + II N T HAE + Sbjct: 1 MQSHEAYLKRAIELSVKSRESGNTPFAALLVDKDGNIIMEQMNNEITEHKCTGHAETQLV 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 S+E L + LY T EPC MC+ AI I + Y + Sbjct: 61 ERASHAYSKEFLWDCTLYTTAEPCAMCSGAIYWGNIGHVVYAMTEKD 107 >gi|111021958|ref|YP_704930.1| guanine deaminase [Rhodococcus jostii RHA1] gi|110821488|gb|ABG96772.1| possible guanine deaminase [Rhodococcus jostii RHA1] Length = 161 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 47/105 (44%), Gaps = 1/105 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + A+E A P GAVAV + +IS N DVT HAE+ AI Sbjct: 10 DLAHLRRAIELADETGDAGNRPFGAVAVGADGHVISEGANSVATSADVTEHAELDAITTA 69 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 C L +Y + EPC MC+AA+ A I R+ Y AS+ Sbjct: 70 CGEGRTGDLVGATMYASGEPCPMCSAAMVWAGITRVVYAASSADF 114 >gi|188591891|ref|YP_001796489.1| guanine deaminase [Cupriavidus taiwanensis LMG 19424] gi|170938265|emb|CAP63250.1| Guanine deaminase [Cupriavidus taiwanensis LMG 19424] Length = 145 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 32/100 (32%), Positives = 49/100 (49%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ A R P GAV VL+ ++++ N D T HAE+ A+R R L Sbjct: 1 MREAVRLAVANRDRGARPFGAVLVLDGEVVATGVNDIVHSHDPTTHAEMEAVRAAARKLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 + L +Y + PC MC AA+++A ++ +YY N Sbjct: 61 RPDLRGSVVYASGHPCPMCLAAMTMAGVQAVYYAFDNHDA 100 >gi|325971024|ref|YP_004247215.1| CMP/dCMP deaminase zinc-binding protein [Spirochaeta sp. Buddy] gi|324026262|gb|ADY13021.1| CMP/dCMP deaminase zinc-binding protein [Spirochaeta sp. Buddy] Length = 156 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 1/115 (0%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ A+E+A+ L+N P GA+ V + A N D TAHAE+ IR Sbjct: 2 DERTYLIQAVEKARETMLQNLGGPFGALLVDTQGQVFVASNTVLGSNDPTAHAEVNVIRQ 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 C+ L LY T PC MC +A A I+ +YYG + I F Sbjct: 62 VCKQKGTHDLQGCILYTTCYPCPMCLSACIWANIKEVYYGCTAQDAEAIGFRDDF 116 >gi|158429187|pdb|2O3K|A Chain A, Yeast Cytosine Deaminase D92e Triple Mutant Bound To Transition State Analogue Hpy gi|158429188|pdb|2O3K|B Chain B, Yeast Cytosine Deaminase D92e Triple Mutant Bound To Transition State Analogue Hpy Length = 161 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 13/150 (8%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59 K M A EEA +P+G + + ++ R N + T H EI + Sbjct: 12 KWDQKGMDIAYEEALLGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL 71 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYT 118 R+ ++ + LY TL PC MC AI + I R G + N K G + Sbjct: 72 ENCGRLEG-KVYKDTTLYTTLSPCEMCTGAIIMYGIPRCVIGENVNFKSKGEK------Y 124 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148 L T H + + ++R +++++ F ER Sbjct: 125 LQTRGHEVVV---VDDERCKKLMKQFIDER 151 >gi|255009912|ref|ZP_05282038.1| putative riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacteroides fragilis 3_1_12] gi|313147700|ref|ZP_07809893.1| riboflavin biosynthesis protein ribD [Bacteroides fragilis 3_1_12] gi|313136467|gb|EFR53827.1| riboflavin biosynthesis protein ribD [Bacteroides fragilis 3_1_12] Length = 346 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 20/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ +M ++ A+N VGAV V + +II + AHAE+ A Sbjct: 1 MEE-EKYMRRCIQLARNGLCNVSPNPMVGAVIVCDEQIIGEGYHVRCGE----AHAEVNA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR + +L +YV+LEPC CA I +I ++ G +P Sbjct: 56 IRS---VKDPSLLKRSTIYVSLEPCSHHGKTPPCADLIIEKQIPKIVIGCQDPFSKVAGK 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ E+ R++IQ F Sbjct: 113 GIQKLRNAGR----EVIVGVLEKECRELIQKF 140 >gi|294953511|ref|XP_002787800.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239902824|gb|EER19596.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 319 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 3/118 (2%) Query: 3 KGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM A+ A E P GA N+ ++ A N +D T HAE+ AIRM Sbjct: 33 SHEQFMEAAVLSATTGVKLKEGGPFGACITRNDVVVCCAHNTFFSDRDPTCHAEMNAIRM 92 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +L + L +Y + EPC MC AI + IR LY G + +NG ++ + Sbjct: 93 AMHLLKTDDLAGCVIYSSFEPCPMCWGAILASGIRLLYVGL--DRHTAAKNGVEYLSF 148 Score = 44.1 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 42/123 (34%), Gaps = 6/123 (4%) Query: 28 AVAV-LNNKIISRAGNRN--RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 + V ++KII+ N D + IR+ CR ++ L ++ EP Sbjct: 186 CIIVNKDSKIIA-DSNTPSIESFTDSVDTPMVKTIRLACRAINSPYLQGCKIFTLEEPDV 244 Query: 85 MCAAAISLARIRRLYYGASNPKGGG-IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 AA A + L+Y S G Y L + + G II Sbjct: 245 ESHAACLWALVDSLHY-CSEALPGSRARYQRDQYELEPSNRDIRVVYGCGVDTCLSIIPV 303 Query: 144 FFK 146 +F+ Sbjct: 304 WFQ 306 >gi|50083486|ref|YP_044996.1| putative cytidine and deoxycytidylate deaminase zinc-binding protein [Acinetobacter sp. ADP1] gi|49529462|emb|CAG67174.1| putative cytidine and deoxycytidylate deaminase zinc-binding protein [Acinetobacter sp. ADP1] Length = 184 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 60/156 (38%), Gaps = 11/156 (7%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRE-LKDVTAHAEILAI 59 ++ F+ A+ + P A+ V + I++ AGN + D T HAE +A Sbjct: 29 EQDLYFLRKTFALAEQTKAQGLHPFAAIVVDADGNIVTEAGNNSLPPTGDPTRHAETVAA 88 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-------- 111 R+ S + L LY EPC MCA AI I R+ YG S K I Sbjct: 89 GQAARLKSLKELRTCTLYTNAEPCAMCAGAIYWTGIGRVVYGMSEKKLLSITGDHPENPT 148 Query: 112 -NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + A+ E+ + + Q F++ Sbjct: 149 LSLPCRTVFASGQRGIEVIGPCLSEEAAVAHQGFWQ 184 >gi|77409347|ref|ZP_00786049.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae COH1] gi|77172049|gb|EAO75216.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae COH1] Length = 362 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 25/147 (17%) Query: 8 MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M+ AL+EA+ + P VGAV V +++IIS+ ++ HAE AI+ Sbjct: 1 MALALKEAEKGM--GFVAPNPLVGAVIVKDDRIISKGYHKRFGDL----HAERQAIKNA- 53 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 E + LYVTLEPC C A+ + I+++ G+ +P G Sbjct: 54 ----DEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDPNPLVSGKGIALL 109 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 + + GI + + + F Sbjct: 110 RKEGLN----VEVGILREECDALNERF 132 >gi|294783803|ref|ZP_06749125.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 1_1_41FAA] gi|294479615|gb|EFG27394.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 1_1_41FAA] Length = 369 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 27/158 (17%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHA 54 M K FM+ A+E A + P VGAV V + KII ++ HA Sbjct: 1 MDKTVDEKFMARAIELAFRGL--GGVNPNPLVGAVVVKDGKIIGEGWHKKYGG----PHA 54 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108 E+ A+ E +YVTLEPC CA I A I+R +P Sbjct: 55 EVWALNEAG-----EEAKGATIYVTLEPCSHQGKTPPCAKRIVEAGIKRCVIACVDPNPL 109 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A ++ GI E+ ++++ + F K Sbjct: 110 VAGKGIKIIEDAG----IKVDFGILEKEAKEVNKVFLK 143 >gi|313635947|gb|EFS01887.1| tRNA-specific adenosine deaminase [Listeria seeligeri FSL S4-171] Length = 81 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 45/73 (61%) Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136 YVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ E+ G+ E Sbjct: 1 YVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDDRFNHTCEVESGLMEAE 60 Query: 137 SRQIIQDFFKERR 149 S ++++ FF+E R Sbjct: 61 SSEMLKSFFQELR 73 >gi|160896585|ref|YP_001562167.1| CMP/dCMP deaminase [Delftia acidovorans SPH-1] gi|160362169|gb|ABX33782.1| CMP/dCMP deaminase zinc-binding [Delftia acidovorans SPH-1] Length = 171 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 1/101 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +++ A+ A A R P GA+ V + ++++ A N N E D TAHAE+ AIR Sbjct: 16 ERDGLYLRRAIAMADRARQRGNRPFGALIVAADGRVLAEASNANGESGDCTAHAELSAIR 75 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + + +E L LY + EPC MCA AI + I R+ YG Sbjct: 76 LASPLHDREALSAATLYSSAEPCVMCAGAIFWSAIGRVVYG 116 >gi|295102179|emb|CBK99724.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Faecalibacterium prausnitzii L2-6] Length = 374 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 55/151 (36%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ VGAV +II + ++ AHAE A+ Sbjct: 2 NDKEYMRLALQLAKKGCGWTSPNPMVGAVVAKEGRIIGQGWHQRYGQ----AHAERNAL- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E LYVTLEPC C AI A I R+ G+++P G Sbjct: 57 ----ASCTEDPQGATLYVTLEPCCHYGKQPPCVDAILGAGIHRVVVGSADPNPLVAGKGI 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 H ++ + ++ + + FF Sbjct: 113 TILRA----HGIDVTENVLQEECDALNKVFF 139 >gi|254173530|ref|ZP_04880202.1| riboflavin biosynthesis protein RibD [Thermococcus sp. AM4] gi|214032222|gb|EEB73052.1| riboflavin biosynthesis protein RibD [Thermococcus sp. AM4] Length = 360 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 60/155 (38%), Gaps = 22/155 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 + FM ALE A+ + P VGAV V + ++I +R K HAE+ Sbjct: 3 SEDERFMRLALELAKRG--EGWVNPNPMVGAVIVKDGEVIGVGWHRRFGEK----HAEVN 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AI + +YVTLEPC CA I +R+ +P Sbjct: 57 AIEDA--KSRGHDVRGATMYVTLEPCSHWGKQPPCADRIIKEGFKRVVVAMVDPNPLVSG 114 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A E+ G+ E +R++ + F K Sbjct: 115 RGIEKMRKAG----IEVEVGVLEDEARRLNEIFIK 145 >gi|255528573|ref|ZP_05395347.1| riboflavin biosynthesis protein RibD [Clostridium carboxidivorans P7] gi|296188130|ref|ZP_06856522.1| riboflavin biosynthesis protein RibD [Clostridium carboxidivorans P7] gi|255507738|gb|EET84204.1| riboflavin biosynthesis protein RibD [Clostridium carboxidivorans P7] gi|296047256|gb|EFG86698.1| riboflavin biosynthesis protein RibD [Clostridium carboxidivorans P7] Length = 370 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 25/153 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M AL A + + P VGAV V N I+ + ++ HAE+ A+ Sbjct: 9 DEYYMKMALNLALKG--QGNVNPNPLVGAVIVNNGNIVGQGYHKFYGG----PHAEVYAL 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + E +LYV+LEPC CA A+ A I+++ +P NG Sbjct: 63 KEAG-----ESAKGGELYVSLEPCSHYGKTPPCAEAVLKAGIKKVVIAMKDPNSLVAGNG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + E+ G+ E+ ++++ + F K Sbjct: 118 IKLLEKNG----VEVIVGVLEEEAKKVNEIFIK 146 >gi|182626736|ref|ZP_02954476.1| riboflavin biosynthesis protein RibD [Clostridium perfringens D str. JGS1721] gi|177907904|gb|EDT70496.1| riboflavin biosynthesis protein RibD [Clostridium perfringens D str. JGS1721] Length = 366 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 39/149 (26%), Positives = 57/149 (38%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM ALE A+ N P VGAV V + +II + + HAEI AI Sbjct: 2 DEFFMKKALELARKGEGYVNPNPLVGAVIVKDGEIIGQGYHEFFGGN----HAEINAINS 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + +YVTLEPC C AI R +R+ G +P + Sbjct: 58 SIKST-----EGATIYVTLEPCCHYGKTPPCVEAIIKNRFKRVVVGNLDPNPLVSGKSIK 112 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + E+ G+ E+ ++ + F Sbjct: 113 ILRESG----IEVKVGVLEKECIRLNEIF 137 >gi|39970877|ref|XP_366829.1| hypothetical protein MGG_02905 [Magnaporthe oryzae 70-15] gi|149210385|ref|XP_001522567.1| hypothetical protein MGCH7_ch7g670 [Magnaporthe oryzae 70-15] gi|86196625|gb|EAQ71263.1| hypothetical protein MGCH7_ch7g670 [Magnaporthe oryzae 70-15] gi|145017270|gb|EDK01633.1| hypothetical protein MGG_02905 [Magnaporthe oryzae 70-15] Length = 593 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 41/162 (25%), Positives = 64/162 (39%), Gaps = 44/162 (27%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR--- 60 F+ AL+ A+ A NE PVG V V ++I+R N ++ T HAE +A+ Sbjct: 209 HQGFIEEALDMARLALKTNETPVGCVLVYRGRVIARGMNATNITRNGTRHAEYMALSSLF 268 Query: 61 ------------------------MGCRILSQEILP-----------------EVDLYVT 79 + + P E LYVT Sbjct: 269 GTKPDAPPPSHPSCKHEVDDPGEWDAVDVTKSYLYPYGQKLHPSPHVTASIVQESTLYVT 328 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 +EPC MCA+ + +I+++Y+GA N K GG + + +T Sbjct: 329 VEPCVMCASLLKQLKIKKVYFGAVNDKFGGTGGVFRIHKNST 370 >gi|220913945|ref|YP_002489254.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6] gi|219860823|gb|ACL41165.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6] Length = 164 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 2/120 (1%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 F++ ++ A L + P GA+ V + K NR D TAHAE+ AIR C Sbjct: 8 EQFLARSIRLATANVLNSGGPFGAMIVTADGKTF-DGVNRVTADNDPTAHAEVTAIRTAC 66 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R + L LY + EPC MC A+ AR+ R+ + A + + + Sbjct: 67 REMGTFDLSGAVLYTSCEPCPMCLASALWARVERVVFAADRHDAASVGFDDAVFYEYFDN 126 >gi|154505762|ref|ZP_02042500.1| hypothetical protein RUMGNA_03302 [Ruminococcus gnavus ATCC 29149] gi|153793780|gb|EDN76200.1| hypothetical protein RUMGNA_03302 [Ruminococcus gnavus ATCC 29149] Length = 159 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 35/106 (33%), Positives = 48/106 (45%), Gaps = 1/106 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++ A+E ++ A P GA+ V +II GN K T HAE Sbjct: 3 QSHEFYLRRAIEISKEAREAGNTPFGALLVNKEGEIIMEQGNIEITEKICTGHAEATLAA 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 S+E L + LY T EPC MCA AI A I R+ YG + + Sbjct: 63 RASHEYSREFLWDCTLYTTAEPCAMCAGAIYWANIGRVVYGMTERR 108 >gi|323693355|ref|ZP_08107571.1| riboflavin biosynthesis protein [Clostridium symbiosum WAL-14673] gi|323502599|gb|EGB18445.1| riboflavin biosynthesis protein [Clostridium symbiosum WAL-14673] Length = 370 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 56/157 (35%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M AL A+ VGAV V ++I R ++ HAE A Sbjct: 1 MLNDEKYMRMALSLARKGCGLAAPNPMVGAVIVKEGRVIGRGYHQKYGG----PHAEQNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + E +YVTLEPC C AI A I R+ G+++P Sbjct: 57 L-----SSCTEPPQGAVMYVTLEPCCHSGKQPPCVKAILRAGISRVVVGSADPNPLVGGK 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + H + I + ++ + FF R Sbjct: 112 GIRILRE----HGVSVTEDILREECAKLNEVFFHYIR 144 >gi|290958302|ref|YP_003489484.1| zinc-binding protein [Streptomyces scabiei 87.22] gi|260647828|emb|CBG70933.1| putative zinc-binding protein [Streptomyces scabiei 87.22] Length = 161 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 15/145 (10%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +++ A+EEA+ IP+GA + ++ R NR + D + HAE A R R Sbjct: 8 AWLATAVEEARTGLAEGGIPIGAALYGPDGTLLGRGHNRRVQDGDPSTHAETAAFRAAGR 67 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + TL PC C+ + I R+ G + GG + + H Sbjct: 68 QRT---YRGTTMVTTLSPCWYCSGLVRQFGISRVVVGEATTFHGGHDWLAE--------H 116 Query: 125 SPEIYPGISEQ-RSRQIIQDFFKER 148 EI + + +++DF ++R Sbjct: 117 GVEIV--LLDDPECVALMRDFVRQR 139 >gi|229820162|ref|YP_002881688.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333] gi|229566075|gb|ACQ79926.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333] Length = 163 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 5/104 (4%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-----NNKIISRAGNRNRELKDVTAHAEI 56 + + F++ A++ A P GA+ V + +++ NR D TAHAE+ Sbjct: 5 SRDSAFLALAVDLATANVADGGGPFGALIVRSDAQPGDHVVATGTNRVTRDHDATAHAEV 64 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 AIR R + L + LY + EPC +C AA AR+ RL Y Sbjct: 65 EAIRAAGRAVGSHALTGMTLYASCEPCPLCLAAALWARLDRLVY 108 >gi|88808480|ref|ZP_01123990.1| putative cytidine/deoxycytidylate deaminase [Synechococcus sp. WH 7805] gi|88787468|gb|EAR18625.1| putative cytidine/deoxycytidylate deaminase [Synechococcus sp. WH 7805] Length = 107 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 50/93 (53%) Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 +A+R G +L + L VTLEPC MCA A+ AR+ ++ + A + K GG+ + Sbjct: 1 MALRQGAWVLGDWRMNHCTLLVTLEPCPMCAGALVQARVGQVIFAAKDRKRGGLGSTINL 60 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + HH + G+ E+ + ++ +F++RR Sbjct: 61 ADHESAHHHMHVIGGVMEEEASALLAGWFRQRR 93 >gi|110003913|emb|CAK98253.1| putative cytidine and deoxycytidylate deaminase protein [Spiroplasma citri] Length = 159 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 20/158 (12%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 MK + + + +Q A + +P+ A+ V N KII+ N+ VT HAEI A+ Sbjct: 13 MKDTTLIFNKLYKLSQRAYKKKHVPISALVVDRNGKIIAIGYNKT-TKNSVTTHAEIFAL 71 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 CR + + ++VT+EPC MC AI + I+ + Y SN K G +++ Sbjct: 72 NQACRKKRTNKISDCSIWVTVEPCMMCLGAIINSGIKVINYYLSNEKYGFLKS------- 124 Query: 120 ATCHHSPEI----YPGISE-QRS---RQIIQDFFKERR 149 +H+ ++ I + + + + +++ FF++ R Sbjct: 125 ---NHTFDVSKLKVQHIRKYEENMILKDLMKKFFEQLR 159 >gi|332977386|gb|EGK14164.1| riboflavin biosynthesis protein RibD [Desmospora sp. 8437] Length = 368 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + + +M AL A+ A + P VGAV V + +++ + LK T HAE+ A Sbjct: 5 LTEDERWMELALRLAEAARGQTSPNPLVGAVVVKDGQLLGSGAH----LKAGTPHAEVHA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + LYVTLEPC C + +RR+ G+++P Sbjct: 61 LEQAGKSA-----KGSTLYVTLEPCNHYGRTPPCTERTISSGVRRVVVGSTDPDPLVSGK 115 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G Q A + G+ R ++ + +F RR Sbjct: 116 GVQRLREAGL----SVKTGVLADRCTRLNEAYFHHRR 148 >gi|187778552|ref|ZP_02995025.1| hypothetical protein CLOSPO_02147 [Clostridium sporogenes ATCC 15579] gi|187772177|gb|EDU35979.1| hypothetical protein CLOSPO_02147 [Clostridium sporogenes ATCC 15579] Length = 364 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 40/156 (25%), Positives = 62/156 (39%), Gaps = 25/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M+ N +M AL+ A+ ++ P VGA+ + +NKII ++ HAE+ Sbjct: 1 MEDYNFYMEKALKLAKKG--EGKVNPNPKVGAIVIKDNKIIGEGYHKYFGG----PHAEV 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+R +YVTLEPC CA AI A I + +P Sbjct: 55 YALREAGEKA-----KGATIYVTLEPCSHYGKTPPCAKAIVKAGIAKAVIAMKDPNSLVQ 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G E+ I E+ S+++ + F K Sbjct: 110 GRGIDILKQNG----IEVVTDIMEKESKELNEVFIK 141 >gi|226364462|ref|YP_002782244.1| deaminase [Rhodococcus opacus B4] gi|226242951|dbj|BAH53299.1| putative deaminase [Rhodococcus opacus B4] Length = 161 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 47/105 (44%), Gaps = 1/105 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + A+E A P GAVAV + +IS N DVT HAE+ AI Sbjct: 10 DLAHLRRAIELADETGDAGNRPFGAVAVGADGHVISEGANSVATSADVTEHAELDAITTA 69 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 C L +Y + EPC MC+AA+ A I R+ Y AS+ Sbjct: 70 CGEGRTGDLVGATMYASGEPCPMCSAAMVWAGITRVVYAASSADF 114 >gi|224110294|ref|XP_002315474.1| predicted protein [Populus trichocarpa] gi|118483375|gb|ABK93588.1| unknown [Populus trichocarpa] gi|222864514|gb|EEF01645.1| predicted protein [Populus trichocarpa] Length = 186 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 2/120 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F++ A+EEA + P GAV VLN++++ N + D TAHAE+ AIR Sbjct: 29 DRDHKFLTKAVEEAYKGVDSGDGGPFGAVVVLNDEVVVACHNMVLKHTDPTAHAEVTAIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L+Q L + ++Y + EPC MC AI L+RI+RL YGA I F A Sbjct: 89 EACKKLNQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF-DDFIADA 147 >gi|271964778|ref|YP_003338974.1| guanine deaminase [Streptosporangium roseum DSM 43021] gi|270507953|gb|ACZ86231.1| Guanine deaminase [Streptosporangium roseum DSM 43021] Length = 188 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 52/130 (40%), Gaps = 33/130 (25%) Query: 7 FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ A+ A + + P G V V + II+R NR D TAH E+ AIR +I Sbjct: 6 FMTEAVRLATESVMNGWGGPFGTVIVKDGDIIARGQNRVLLTGDPTAHGEVEAIRKAIQI 65 Query: 66 LSQE--------------------------------ILPEVDLYVTLEPCTMCAAAISLA 93 L+ +L LY + PC MC +AI + Sbjct: 66 LNPWAPSISEEYQNESTLTLVPRPEGSPDPLPRRAGMLLGCSLYTSGAPCPMCMSAIYWS 125 Query: 94 RIRRLYYGAS 103 RI +Y+G+ Sbjct: 126 RIDSVYFGSD 135 >gi|156387793|ref|XP_001634387.1| predicted protein [Nematostella vectensis] gi|156221469|gb|EDO42324.1| predicted protein [Nematostella vectensis] Length = 96 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 2/96 (2%) Query: 1 MKKGNV-FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ V F+ A++ ++ + + P GAV +NKII+ N + D TAHAE+ A Sbjct: 1 MEEYKVQFLERAVQLSKEGSDQGLGTPFGAVITKDNKIIAETANLSFVNCDPTAHAEVSA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 IR C L L DLY + PC MC AAI AR Sbjct: 61 IRQACSALKSRDLTGCDLYTSCYPCAMCMAAIYWAR 96 >gi|298374645|ref|ZP_06984603.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_19] gi|298269013|gb|EFI10668.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_19] Length = 359 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 23/154 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 ++ +M+ +E A+ R + P VGAV V +II +R AHAE+ Sbjct: 2 IEVEEKYMARCIELAKGG--RGNVSPNPMVGAVVVHKGRIIGEGFHRKCGE----AHAEV 55 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 AI + + +L + +YV+LEPC CA I I R+ G +P Sbjct: 56 NAI---ASVKDESLLTDSTIYVSLEPCSHYGKTPPCAELIIRKGIPRVVVGCLDPFPEVS 112 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ E+ +R + + F Sbjct: 113 GRGVRMLREAG----VEVVTGVMEEEARALNKAF 142 >gi|325289915|ref|YP_004266096.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Syntrophobotulus glycolicus DSM 8271] gi|324965316|gb|ADY56095.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Syntrophobotulus glycolicus DSM 8271] Length = 398 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 21/154 (13%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M AL+ A+ A R P VG + V + II ++ K T HAE+ A+ Sbjct: 37 DQDKFYMQRALDLAEMAEGRTSPNPMVGCLIVKDGLIIGEGYHQ----KAGTPHAEVHAL 92 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + D+YVTLEPC C A+ A ++R++ +P G Sbjct: 93 TAAGK-----RASGADVYVTLEPCSHFGRTPPCCDALIQAGVKRVFVALVDPNPLVRGKG 147 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 Q A E++ G+ E + ++ + F K Sbjct: 148 IQKMRAAG----IEVFTGLLENEAAKLNEPFVKA 177 >gi|325508006|gb|ADZ19642.1| Riboflavin biosynthesis protein RIBD (pirimidine deaminase and pirimidine reductase) [Clostridium acetobutylicum EA 2018] Length = 365 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 40/151 (26%), Positives = 61/151 (40%), Gaps = 21/151 (13%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM ALE A+ + VGAV V +NKI+ + HAE+ A+ M Sbjct: 2 NEAFMKRALEIAEKGSGYVNPNPMVGAVIVKDNKIVGEGYHEKFGGN----HAEVNALNM 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + +LYVTLEPC CA A+ A I+R+ +P G + Sbjct: 58 AGK-----DAEGSELYVTLEPCSHYGKTPPCALAVVKAGIKRVIIAMEDPNPLVSTKGIK 112 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 E+ G+ ++ S ++ + F K Sbjct: 113 ILKENG----IEVITGVMKKESEKLNEVFIK 139 >gi|331270609|ref|YP_004397101.1| riboflavin biosynthesis protein RibD [Clostridium botulinum BKT015925] gi|329127159|gb|AEB77104.1| riboflavin biosynthesis protein RibD [Clostridium botulinum BKT015925] Length = 372 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 23/152 (15%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+ ++ P VGAV V +NKII ++ HAEI A++ Sbjct: 2 DLRYMKRAINLSKLGIGHT-YPNPLVGAVIVKDNKIIGEGYHQYFGEN----HAEINALK 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 +E + +YVTLEPC CA AI + I+++ G +P G Sbjct: 57 NV-----KEDVNGATMYVTLEPCSHYGKTPPCANAIVKSGIKKVIIGMRDPNSLVAGRGI 111 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + ++ E+ G+ E+ +++ + F K Sbjct: 112 RILK----NNGIEVIQGVLEEEIKKVNEIFIK 139 >gi|299532967|ref|ZP_07046354.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni S44] gi|298719191|gb|EFI60161.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni S44] Length = 166 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 1/104 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 ++ A+ A A R P GA+ V + ++++RA N N E D TAHAE+ AIR+ Sbjct: 13 DGCYLREAIALADTARERGNRPFGALIVAADGRVLARASNANGESGDCTAHAELSAIRLA 72 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 + S++ L LY + EPC MCA AI + I R+ YG + Sbjct: 73 SPLHSRDELAVATLYSSAEPCVMCAGAIFWSAIGRVVYGIDAER 116 >gi|302679520|ref|XP_003029442.1| hypothetical protein SCHCODRAFT_78305 [Schizophyllum commune H4-8] gi|300103132|gb|EFI94539.1| hypothetical protein SCHCODRAFT_78305 [Schizophyllum commune H4-8] Length = 158 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 16/146 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV----LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A EEA A IP+G+ V + +I+ N + T H EI + Sbjct: 13 MQRAFEEADAGAKEGGIPIGSALVQHDDSGDHLIASGRNLRIQKGSATLHGEICCLETAG 72 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R L + + +Y TL PC MC AI L +I R+ G + GG E Q Sbjct: 73 R-LKAGVYRKCTIYTTLSPCIMCTGAILLYKIPRVVIGENANFVGGEELLKQ-------- 123 Query: 124 HSPEIYPGISEQ-RSRQIIQDFFKER 148 H E+ + + R ++++ F KE+ Sbjct: 124 HGVEVV--VLDDNRCKELMAKFIKEK 147 >gi|299532573|ref|ZP_07045963.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni S44] gi|298719520|gb|EFI60487.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni S44] Length = 164 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 3/109 (2%) Query: 2 KKGNVFMSCALEEA---QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + ++ ++ A P GAV V + K+++RA N+ +L D TAHAE+ A Sbjct: 4 QDSEKYLLESIRLAMGNVKGRESATWPFGAVLVRDGKVLARAVNQVDDLCDPTAHAEMQA 63 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 +R+ + L L +Y + PC+MC A+ LA ++++Y+ SN G Sbjct: 64 LRIAAKALGSTDLSGSVMYASGYPCSMCHTAMLLAGVKQVYFAYSNEDG 112 >gi|295692792|ref|YP_003601402.1| riboflavin biosynthesis protein ribd [Lactobacillus crispatus ST1] gi|295030898|emb|CBL50377.1| Riboflavin biosynthesis protein ribD [Lactobacillus crispatus ST1] Length = 352 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+K +M+ ALEEA+ + P VGAV V N ++++ + + HAE A Sbjct: 1 MEKDTFYMNLALEEAKKGRYQTWKNPMVGAVIVKNGQVLATGYHHHYGQN----HAERDA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I L+ E L LYVTLEPC C+ I + I+R+ G +P Sbjct: 57 I----SKLTPEQLFNSTLYVTLEPCNHYGKQPPCSDLIIKSGIKRVVVGQIDPHKLVTGK 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G ++ G+ + ++ + F+ Sbjct: 113 GIAQLQKNG----IQVTTGVLADDASKLNK-FY 140 >gi|330505155|ref|YP_004382024.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pseudomonas mendocina NK-01] gi|328919441|gb|AEB60272.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pseudomonas mendocina NK-01] Length = 371 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 38/156 (24%), Positives = 57/156 (36%), Gaps = 22/156 (14%) Query: 1 MKKGNV-FMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M + + FM+ AL A+ VG V V + +I+ + HAE+ Sbjct: 1 MSEHDQLFMARALRLARKGLYSTHPNPRVGCVIVRDGEIVGEGWHARAGE----PHAEVH 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+R YVTLEPC CA A+ A + R+ +P Sbjct: 57 ALRQAGDKA-----RGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPQVAG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 NG L + E+ G+ E +R + F K Sbjct: 112 NGL----LRLMNAGIEVRSGVLESEARALNAGFIKR 143 >gi|325110159|ref|YP_004271227.1| CMP/dCMP deaminase zinc-binding protein [Planctomyces brasiliensis DSM 5305] gi|324970427|gb|ADY61205.1| CMP/dCMP deaminase zinc-binding protein [Planctomyces brasiliensis DSM 5305] Length = 154 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 39/147 (26%), Positives = 58/147 (39%), Gaps = 12/147 (8%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRM 61 M A+E A++ P GAV + I++ NR E + T H EI+AI Sbjct: 7 DARIMRRAIELAEHNRQ---FPFGAVITQSGSETILAEGWNRGSE--NPTWHGEIVAIND 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 Q + LY T EPC MC +AI A I R+ YG S P + + Sbjct: 62 FFSREQQPDTESLTLYTTAEPCPMCQSAIHWAGIDRVVYGTSIPTLISLGFQQISLRASD 121 Query: 122 C-----HHSPEIYPGISEQRSRQIIQD 143 E+ G+ ++ Q+ + Sbjct: 122 IQCRAPFQECELTGGLLKEECDQLFKQ 148 >gi|221068800|ref|ZP_03544905.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] gi|220713823|gb|EED69191.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] Length = 164 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 3/109 (2%) Query: 2 KKGNVFMSCALEEA---QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + ++ ++ A P GAV V + KI++RA N+ +L D TAHAE+ A Sbjct: 4 QDSEKYLLESIRLAMGNVKGRESATWPFGAVLVRDGKILARAVNQVDDLCDPTAHAEMQA 63 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 +R+ + L L +Y + PC+MC A+ LA ++++Y+ SN G Sbjct: 64 LRIAAKALGSTDLSGAVMYASGYPCSMCHTAMLLAGVKQVYFAYSNEDG 112 >gi|67464322|pdb|1YSD|A Chain A, Yeast Cytosine Deaminase Double Mutant gi|67464323|pdb|1YSD|B Chain B, Yeast Cytosine Deaminase Double Mutant Length = 161 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 13/150 (8%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59 K M A EEA +P+G + + ++ R N + T H EI + Sbjct: 12 KWDQKGMDIAYEEALLGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL 71 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYT 118 R+ ++ + LY TL PC MC AI + I R G + N K G + Sbjct: 72 ENCGRLEG-KVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFKSKGEK------Y 124 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148 L T H + + ++R +++++ F ER Sbjct: 125 LQTRGHEVVV---VDDERCKKLMKQFIDER 151 >gi|315305132|ref|ZP_07875140.1| cytidine/deoxycytidylate deaminase family protein [Listeria ivanovii FSL F6-596] gi|313626498|gb|EFR95623.1| cytidine/deoxycytidylate deaminase family protein [Listeria ivanovii FSL F6-596] Length = 81 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 45/73 (61%) Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136 YVTLEPC MC+ AI L+RI ++YYGA +PK G + +H+ E+ G+ E Sbjct: 1 YVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDDRFNHTCEVESGLMEAE 60 Query: 137 SRQIIQDFFKERR 149 S ++++ FF+E R Sbjct: 61 SSEMLKSFFQELR 73 >gi|237743881|ref|ZP_04574362.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium sp. 7_1] gi|229432912|gb|EEO43124.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium sp. 7_1] Length = 370 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 59/155 (38%), Gaps = 25/155 (16%) Query: 2 KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 +M+ A+E A+ + P VGAV V + KII ++ HAE+ Sbjct: 4 NSDEKYMARAIELAKRG--TGSVNPNPLVGAVVVKDGKIIGEGWHKKYGG----PHAEVW 57 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ E +YVTLE C CA I A I+R +P Sbjct: 58 ALNEAG-----ENAKGATIYVTLESCSHQGKTPPCAKRIVEAGIKRCVVACIDPNPLVAG 112 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A E+ G+ E+ ++ + + F K Sbjct: 113 KGMKIIEDAG----IEVKFGVLEKEAKDVNKIFLK 143 >gi|284006397|emb|CBA71633.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Arsenophonus nasoniae] Length = 369 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 58/154 (37%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FMS AL A+ + P VG V V + +++ + AHAEI A++M Sbjct: 5 DKQFMSRALSLAKQGRFTTSPNPNVGCVIVRDGEVVGEGFHCKTGE----AHAEIYALQM 60 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ A I+R+ +P G Sbjct: 61 AGEKA-----NGATAYVTLEPCSHYGKTPPCADALISAGIQRVVVAMQDPNPQVAGRGLL 115 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ + Q+ Q F K R Sbjct: 116 KLQQAG----IEVIHGLLIDEAEQLNQGFLKRMR 145 >gi|284054867|ref|ZP_06385077.1| tRNA-adenosine deaminase [Arthrospira platensis str. Paraca] Length = 87 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M AL+ A E+PVGA+ V K+I++ NR D TAHAEI+A+R Sbjct: 6 TTHSHWMQQALKLGAAAGEAGEVPVGALIVNQQGKLIAQGENRRERDPDPTAHAEIIALR 65 Query: 61 MGCRILSQEILPEVDLYVTLEP 82 +IL L LYVTLEP Sbjct: 66 QASQILGDWHLNTCTLYVTLEP 87 >gi|330825753|ref|YP_004389056.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus denitrificans K601] gi|329311125|gb|AEB85540.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus denitrificans K601] Length = 163 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 46/106 (43%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + A++ A ++ P GAV + + ++ N + D +AHAE+ A+R Sbjct: 9 TSDIALLRRAVDLAHANRMQGGRPFGAVIARDGRQLATGVNETHQTCDPSAHAEMQALRE 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 R L +Y + PC MC AA+ +A R+++ N Sbjct: 69 ATRARRDASLAGCSVYASGHPCPMCLAALVMAGAERVFFAFDNRDA 114 >gi|319762326|ref|YP_004126263.1| cmp/dcmp deaminase zinc-binding protein [Alicycliphilus denitrificans BC] gi|317116887|gb|ADU99375.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus denitrificans BC] Length = 163 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 46/106 (43%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + A++ A ++ P GAV + + ++ N + D +AHAE+ A+R Sbjct: 9 TSDIALLRRAVDLAHANRMQGGRPFGAVIARDGRQLATGVNETHQTCDPSAHAEMQALRE 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 R L +Y + PC MC AA+ +A R+++ N Sbjct: 69 ATRARRDASLAGCSVYASGHPCPMCLAALVMAGAERVFFAFDNRDA 114 >gi|264680472|ref|YP_003280382.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] gi|262210988|gb|ACY35086.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] Length = 166 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 1/106 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ A+ A A R P GA+ V + ++++RA N N E D TAHAE+ AIR Sbjct: 11 DSDGRYLREAIALADTARERGNRPFGALIVAADGRVLARASNANGESGDCTAHAELSAIR 70 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 + + S+ L LY + EPC MCA AI + I R+ YG + Sbjct: 71 LASPLHSRGELAVATLYSSAEPCVMCAGAIFWSAIGRVVYGIDAER 116 >gi|226950300|ref|YP_002805391.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A2 str. Kyoto] gi|226842626|gb|ACO85292.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A2 str. Kyoto] Length = 365 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 25/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M+ N +M AL+ A+ ++ P VGA+ V NNKII ++ +HAE+ Sbjct: 1 MEDYNFYMEKALKLAERG--EGKVNPNPKVGAIVVKNNKIIGEGYHKYFGG----SHAEV 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+R +YVTLEPC CA +I I + +P Sbjct: 55 YALREAGEKA-----KGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVE 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G E+ GI E+ S+++ + F K Sbjct: 110 GRGIDILKQNG----IEVVTGIMEKESKKLNEVFIK 141 >gi|323705867|ref|ZP_08117439.1| riboflavin biosynthesis protein RibD [Thermoanaerobacterium xylanolyticum LX-11] gi|323534863|gb|EGB24642.1| riboflavin biosynthesis protein RibD [Thermoanaerobacterium xylanolyticum LX-11] Length = 360 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 21/150 (14%) Query: 5 NVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL+ A+ P VGAV + + +II + HAEI A++ Sbjct: 2 EKYMKRALQLAKLGVGHTNPNPLVGAVIIKDGRIIGEGYHEYYGG----PHAEINALKNA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 +E + LYVTLEPC C A+ + I+ ++ +P G + Sbjct: 58 -----KEDVNGATLYVTLEPCCHHGKTPPCVDAVIKSGIKNVFIAMEDPNELVAGRGIKK 112 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A + +Y G+ + + ++ + F K Sbjct: 113 LEEAGLN----VYTGLLKDEAEKLNEVFIK 138 >gi|34764917|ref|ZP_00145265.1| DIAMINOHYDROXYPHOSPHORIBOSYLAMINOPYRIMIDINE DEAMINASE; 5-AMINO-6-(5-PHOSPHORIBOSYLAMINO)URACIL REDUCTASE [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27885744|gb|EAA23138.1| DIAMINOHYDROXYPHOSPHORIBOSYLAMINOPYRIMIDINE DEAMINASE; 5-AMINO-6-(5-PHOSPHORIBOSYLAMINO)URACIL REDUCTASE [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 223 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 60/153 (39%), Gaps = 25/153 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M+ A+E A+ + P VGAV V + KII ++ HAE+ A+ Sbjct: 6 DEKYMARAIELAKRG--IGGVNPNPLVGAVIVKDGKIIGEGWHKKFGG----PHAEVWAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 E +YVTLEPC CA I A I+R +P G Sbjct: 60 NEAG-----ENAEGATIYVTLEPCSHQGKTPPCAKRIVEAGIKRCVVACIDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + A E+ G+ E+ ++ + + F K Sbjct: 115 IKIMEDAG----IEVELGVLEKEAKDVNKIFLK 143 >gi|327440271|dbj|BAK16636.1| pyrimidine deaminase [Solibacillus silvestris StLB046] Length = 371 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 25/154 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 MK +M ALE A A+ R P VGAV V + I+ +R HAE+ Sbjct: 1 MKTDQDYMQLALELA--ASARGNTNPNPLVGAVIVKDGVIVGTGLHRKAGE----PHAEV 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+ M E + +YVTLEPC CA + + +R+ +P Sbjct: 55 HAVNMAG-----EHTKDATIYVTLEPCSHYGKTPPCAKLLKESGFKRVVVATEDPNPEVA 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ ++ ++++ + F Sbjct: 110 GRGIRLLRDAG----IEVEVGVLQEEAQKLNERF 139 >gi|319645199|ref|ZP_07999432.1| RibD protein [Bacillus sp. BT1B_CT2] gi|317393008|gb|EFV73802.1| RibD protein [Bacillus sp. BT1B_CT2] Length = 362 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ ALE A+ P VGAV V + +++ + AHAE+ AI+ Sbjct: 2 TDAHYMNLALELARQGEGQTGANPLVGAVVVKDGEVVGMGAHLKYGE----AHAEVHAIQ 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M R +YVTLEPC CA I + ++R+ A +P G Sbjct: 58 MAGRHA-----EGAVIYVTLEPCSHYGKTPPCAELIIRSGLKRVVVAAEDPNPLVSGRGI 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ ++++ ++ + F Sbjct: 113 EMLRSAG----IEVETGVLKEQAEELNEKF 138 >gi|52080843|ref|YP_079634.1| riboflavin-specific deaminase [Bacillus licheniformis ATCC 14580] gi|52786214|ref|YP_092043.1| hypothetical protein BLi02475 [Bacillus licheniformis ATCC 14580] gi|52004054|gb|AAU23996.1| riboflavin-specific deaminase [Bacillus licheniformis ATCC 14580] gi|52348716|gb|AAU41350.1| RibD [Bacillus licheniformis ATCC 14580] Length = 362 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ ALE A+ P VGAV V + +++ + AHAE+ AI+ Sbjct: 2 TDAHYMNLALELARQGEGQTGANPLVGAVVVKDGEVVGMGAHLKYGE----AHAEVHAIQ 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M R +YVTLEPC CA I + ++R+ A +P G Sbjct: 58 MAGRHA-----EGAVIYVTLEPCSHYGKTPPCAELIIRSGLKRVVVAAEDPNPLVSGRGI 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ ++++ ++ + F Sbjct: 113 EMLRSAG----IEVETGVLKEQAEELNEKF 138 >gi|256819357|ref|YP_003140636.1| riboflavin biosynthesis protein RibD [Capnocytophaga ochracea DSM 7271] gi|256580940|gb|ACU92075.1| riboflavin biosynthesis protein RibD [Capnocytophaga ochracea DSM 7271] Length = 331 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 19/150 (12%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M ++ A N VG+V V +II ++ AHAE+ AI Sbjct: 9 DEWYMRRCIQLAYNGLGSTYPNPMVGSVIVYEGRIIGEGWHQKAGE----AHAEVRAITS 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + + +LP+ +YV+LEPC CA I +I R+ G ++P G + Sbjct: 65 ---VKDKSLLPKSTIYVSLEPCCHFGKTPPCADLIIAHKIGRVVIGTTDPFAKVHGKGIE 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A C E+ G+ E R++ + FF Sbjct: 122 KLRNAGC----EVIVGVCEAECRELNKRFF 147 >gi|156973476|ref|YP_001444383.1| pyrimidine deaminase [Vibrio harveyi ATCC BAA-1116] gi|156525070|gb|ABU70156.1| hypothetical protein VIBHAR_01166 [Vibrio harveyi ATCC BAA-1116] Length = 374 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 57/153 (37%), Gaps = 21/153 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + MS AL+ A+ P VG V V + +I+ + HAE+ A+ Sbjct: 12 SQDFEMMSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGE----PHAEVHAM 67 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 RM YVTLEPC CA + A++ R+ +P G Sbjct: 68 RMAGDKTQ-----GATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRG 122 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q A E+ G+ E + ++ + F K Sbjct: 123 FQMLRDAG----VEVQVGLLESEAIELNKGFIK 151 >gi|168179301|ref|ZP_02613965.1| riboflavin biosynthesis protein RibD [Clostridium botulinum NCTC 2916] gi|182669874|gb|EDT81850.1| riboflavin biosynthesis protein RibD [Clostridium botulinum NCTC 2916] Length = 365 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 25/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M+ N +M AL+ A+ ++ P VGA+ V NNKII ++ HAE+ Sbjct: 1 MEDYNFYMEKALKLAKRG--EGKVNPNPKVGAIVVKNNKIIGEGYHKYFGG----PHAEV 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+R +YVTLEPC CA +I I + +P Sbjct: 55 YALREAGEKA-----KGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVE 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G E+ GI E+ S+++ + F K Sbjct: 110 GRGIDILKQNG----IEVVTGIMEKESKKLNEVFIK 141 >gi|295399034|ref|ZP_06809016.1| riboflavin biosynthesis protein RibD [Geobacillus thermoglucosidasius C56-YS93] gi|312110361|ref|YP_003988677.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y4.1MC1] gi|294978500|gb|EFG54096.1| riboflavin biosynthesis protein RibD [Geobacillus thermoglucosidasius C56-YS93] gi|311215462|gb|ADP74066.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y4.1MC1] Length = 361 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ +M A+E A+ + P VGAV V + +I+ + HAE+ A Sbjct: 1 MRNDEQYMRLAIEMAKAGIGQTSPNPIVGAVVVNSGEIVGFGAHLKAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IRM +YVTLEPC CA + A +RR+ ++P Sbjct: 57 IRMAGEKA-----KGATVYVTLEPCSHYGKTPPCADLLIDAGVRRVVIATTDPNPLVAGK 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + + ++ G+ ++ + ++ + FF Sbjct: 112 GIEKLR----NAGIDVKLGVLKEEADELNRVFF 140 >gi|15893879|ref|NP_347228.1| riboflavin biosynthesis protein RIBD (pirimidine deaminase and pirimidine reductase) [Clostridium acetobutylicum ATCC 824] gi|15023459|gb|AAK78568.1|AE007574_6 Riboflavin biosynthesis protein RIBD (pirimidine deaminase and pirimidine reductase) [Clostridium acetobutylicum ATCC 824] Length = 383 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 21/153 (13%) Query: 2 KKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 K FM ALE A+ + VGAV V +NKI+ + HAE+ A+ Sbjct: 18 KLNEAFMKRALEIAEKGSGYVNPNPMVGAVIVKDNKIVGEGYHEKFGGN----HAEVNAL 73 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 M + +LYVTLEPC CA A+ A I+R+ +P G Sbjct: 74 NMAGK-----DAEGSELYVTLEPCSHYGKTPPCALAVVKAGIKRVIIAMEDPNPLVSTKG 128 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + E+ G+ ++ S ++ + F K Sbjct: 129 IKILKENG----IEVITGVMKKESEKLNEVFIK 157 >gi|256846007|ref|ZP_05551465.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 3_1_36A2] gi|256719566|gb|EEU33121.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 3_1_36A2] Length = 369 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 59/153 (38%), Gaps = 25/153 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M+ A+E A+ + P VGAV V + KII ++ HAE+ A+ Sbjct: 6 DEKYMARAIELAKRG--IGGVNPNPLVGAVIVKDGKIIGEGWHKKFGG----PHAEVWAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 E +YVTLEPC CA I I+R +P G Sbjct: 60 NEAG-----ENAEGATIYVTLEPCSHQGKTPPCAKRIVEVGIKRCVVACIDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + A E+ G+ E+ ++ + + F K Sbjct: 115 IKIMEDAG----IEVELGVLEKEAKDVNKIFLK 143 >gi|310793981|gb|EFQ29442.1| cytidine and deoxycytidylate deaminase zinc-binding region [Glomerella graminicola M1.001] Length = 398 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 42/175 (24%), Positives = 61/175 (34%), Gaps = 57/175 (32%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI---- 59 FM AL+ A+ A NE PVG V V N +I+R N ++ T HAE +A+ Sbjct: 81 HQAFMGQALDMARLALRTNETPVGCVLVYNGSVIARGMNATNVTRNGTRHAEFMAVSALL 140 Query: 60 -------RMGCRI-----------------------LSQEILPEVDLY------------ 77 + + + E LY Sbjct: 141 SYRSRNNEEAADTQLRQQASERSKADVTDDESDLFPMDDDYVKEGHLYPYGQKLHRAMRV 200 Query: 78 -----------VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 VT+EPC MCA + I+++Y+GA N K GG + +T Sbjct: 201 ERSIVRECTLYVTVEPCVMCAGLLRQLGIKKVYFGAVNDKFGGTGGVFSIHKNST 255 >gi|262376969|ref|ZP_06070195.1| riboflavin biosynthesis protein RibD [Acinetobacter lwoffii SH145] gi|262308007|gb|EEY89144.1| riboflavin biosynthesis protein RibD [Acinetobacter lwoffii SH145] Length = 362 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + + V+M A+E A+ P VG V V + +I + + HAE+ A Sbjct: 4 LNQDQVWMRRAIELARQGQYSTKPNPNVGCVIVKDGIVIGEGFH--PQAGQP--HAEVFA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R E YVTLEPC CA + A + ++ +P Sbjct: 60 LRQAG-----EQARGATAYVTLEPCAHYGRTPPCAKGLVEAGVAKVVVACPDPNPLVAGK 114 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G Q A E+ GI E + Q+ Q F K Sbjct: 115 GVQILKDAE----IEVEIGICEDEAHQLNQGFLKA 145 >gi|301098687|ref|XP_002898436.1| cytosine deaminase [Phytophthora infestans T30-4] gi|262105207|gb|EEY63259.1| cytosine deaminase [Phytophthora infestans T30-4] Length = 145 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 12/145 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ A++EA+ IP+G+V +++KI +R NR + HAE+ + R Sbjct: 2 DPFLQAAIDEAKLGLSEGGIPIGSVLEIDDKIAARGHNRRVQRGSAVLHAEMDCLENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + + LY TL PC MC+ A+ L +I + G + G E Sbjct: 62 LTAADY-ARATLYSTLSPCDMCSGAVLLYKIPTIVVGENKTFQGPGEYVRSRGVDVKL-- 118 Query: 125 SPEIYPGISEQR-SRQIIQDFFKER 148 + +++QDF ++ Sbjct: 119 --------LQDETCIKLMQDFIHDK 135 >gi|264677007|ref|YP_003276913.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] gi|262207519|gb|ACY31617.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] Length = 164 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 3/109 (2%) Query: 2 KKGNVFMSCALEEA---QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + ++ ++ A P GAV V + K+++RA N+ +L D TAHAE+ A Sbjct: 4 QDSEKYLLESIRLAMGNVKGRESATWPFGAVLVRDGKVLARAVNQVDDLCDPTAHAEMQA 63 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 +R+ + L L +Y + PC+MC A+ LA ++++Y+ SN G Sbjct: 64 LRIAAKALGSTDLSGAVMYASGYPCSMCHTAMLLAGVKQVYFAYSNEDG 112 >gi|11245466|gb|AAG33626.1|AF312392_1 cytosine deaminase-uracil phosphoribosyltransferase fusion protein [synthetic construct] Length = 373 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 13/150 (8%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59 K M A EEA +P+G + + ++ R N + T H EI + Sbjct: 9 KWDQKGMDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL 68 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYT 118 R+ ++ + LY TL PC MC AI + I R G + N K G + Sbjct: 69 ENCGRLEG-KVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFKSKGEK------Y 121 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148 L T H + + ++R ++I++ F ER Sbjct: 122 LQTRGHEVVV---VDDERCKKIMKQFIDER 148 >gi|319401871|ref|NP_001187388.1| tRNA-specific adenosine deaminase-like protein 3 [Ictalurus punctatus] gi|308322883|gb|ADO28579.1| tRNA-specific adenosine deaminase-like protein 3 [Ictalurus punctatus] Length = 353 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 68/176 (38%), Gaps = 41/176 (23%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIR 60 K +M+ A+E A++ VGAV V + +II+ + HA ++ I Sbjct: 177 KIQEYMTTAVEAARSGREEGMDAVGAVIVDPKSGQIIAVGHDLT--QDHPLHHAVMVCID 234 Query: 61 M----------------GCRI--------------------LSQEILPEVDLYVTLEPCT 84 + CR + I +LYVT EPC Sbjct: 235 LVAWAQGGGVYTYEKHPACRYTASDPQLYAGHSETSGSEENVQPYICTGYELYVTREPCV 294 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 MCA A+ +RI ++YG ++P G + + + +H ++Y G+ Q ++ Sbjct: 295 MCAMALVHSRISSVFYGTASPD-GALGTKYKIHCQKELNHHFDVYKGVMRQACEEL 349 >gi|150010266|ref|YP_001305009.1| riboflavin biosynthesis protein ribD [Parabacteroides distasonis ATCC 8503] gi|149938690|gb|ABR45387.1| riboflavin biosynthesis protein ribD [Parabacteroides distasonis ATCC 8503] Length = 359 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 23/150 (15%) Query: 5 NVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ +E A+ R + P VGAV V +II +R AHAE+ AI Sbjct: 6 EKYMARCIELAKGG--RGNVSPNPMVGAVVVHKGRIIGEGFHRKCGE----AHAEVNAI- 58 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + + +L + +YV+LEPC CA I I R+ G +P G Sbjct: 59 --ASVKDESLLKDSTIYVSLEPCSHYGKTPPCAELIIRKGIPRVVVGCLDPFPEVSGRGV 116 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ E+ +R + + F Sbjct: 117 RMLREAG----VEVVTGVMEEEARALNKAF 142 >gi|298373665|ref|ZP_06983654.1| riboflavin biosynthesis protein RibD [Bacteroidetes oral taxon 274 str. F0058] gi|298274717|gb|EFI16269.1| riboflavin biosynthesis protein RibD [Bacteroidetes oral taxon 274 str. F0058] Length = 349 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 62/160 (38%), Gaps = 22/160 (13%) Query: 1 MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M + A+ A VGAV V + KII +R AHAE+ A Sbjct: 1 MIIDEQYMRRCITLARYADGYAAPNPMVGAVIVRDGKIIGEGYHRRYGE----AHAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + +L++++L LYV LEPC C I + I + G + N Sbjct: 57 VNS---VLNKDLLRRSTLYVNLEPCSHYGKTPPCVDLIVRSGIPNVVVGMRDVNPEVCGN 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 G + A + G+ E R + + F +++R Sbjct: 114 GIRKLLEAGVG----VVEGVLEDECRFLNRRFITFMQKKR 149 >gi|206561430|ref|YP_002232195.1| putative guanine/cytidine deaminase [Burkholderia cenocepacia J2315] gi|198037472|emb|CAR53408.1| putative guanine/cytidine deaminase [Burkholderia cenocepacia J2315] Length = 159 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 1/108 (0%) Query: 1 MKKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M ++ ++ A +N R P GAV V + K+++R+ N D +AHAE+ A+ Sbjct: 5 MSHTETYLVDSIRLAMENVRERKTWPFGAVLVRDGKVLARSVNEVEATCDPSAHAEMQAV 64 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 R + L L +Y + PC+MC +A+ LA + +YY SN G Sbjct: 65 RAASKALGSTDLSGAVMYASGYPCSMCLSAMYLAGVSEVYYAYSNEDG 112 >gi|196231665|ref|ZP_03130522.1| riboflavin biosynthesis protein RibD [Chthoniobacter flavus Ellin428] gi|196224137|gb|EDY18650.1| riboflavin biosynthesis protein RibD [Chthoniobacter flavus Ellin428] Length = 344 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 56/150 (37%), Gaps = 19/150 (12%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM AL EA+ + VGAV V KII+R + L HAEI A+R Sbjct: 2 QDEEFMRAALAEARRGLGQTSPNPAVGAVIVRAGKIIARGYHHRAGL----PHAEIEALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + + +YVTLEPC C AI A RR+ G +P G Sbjct: 58 A---LPKPALARGATIYVTLEPCSTHGRTPPCVEAIIAAGFRRVVIGTIDPNPSHAGRGV 114 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + + + E R + F Sbjct: 115 KLLRDTG----IAVTTDVLEAECRALNAAF 140 >gi|169342987|ref|ZP_02864015.1| riboflavin biosynthesis protein RibD [Clostridium perfringens C str. JGS1495] gi|169298896|gb|EDS80970.1| riboflavin biosynthesis protein RibD [Clostridium perfringens C str. JGS1495] Length = 365 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 57/149 (38%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM ALE A+ N P VGAV V + +II + + HAEI AI Sbjct: 2 DEFFMKKALELARKGEGYVNPNPLVGAVIVKDGEIIGQGYHEFFGGN----HAEINAINS 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + +YVTLEPC C AI + +R+ G +P + Sbjct: 58 SIKST-----EGATIYVTLEPCCHYGKTPPCVEAIIKNKFKRVVVGTLDPNPLVSGKSIK 112 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + E+ G+ E+ ++ + F Sbjct: 113 ILRESG----IEVKVGVLEKECIRLNEIF 137 >gi|326201832|ref|ZP_08191702.1| riboflavin biosynthesis protein RibD [Clostridium papyrosolvens DSM 2782] gi|325987627|gb|EGD48453.1| riboflavin biosynthesis protein RibD [Clostridium papyrosolvens DSM 2782] Length = 367 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 61/152 (40%), Gaps = 21/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M A E ++ R P VGAV V + +IIS + AHAE+ A Sbjct: 1 MNIHEFYMKRAFEISKGGWGRTNPNPLVGAVIVKDGEIISEGFHEALGG----AHAEVCA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + +YV LEPC CA AI+ + I+ + +P Sbjct: 57 FQNA-----TSDISGATIYVNLEPCSHYGRTPPCAKAIAESGIKEVVVAMVDPNPKVSGK 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A + + G+ E+ +R++ + F Sbjct: 112 GIQILKDANIN----VIVGVLEEEARRLNEIF 139 >gi|282880496|ref|ZP_06289203.1| riboflavin biosynthesis protein RibD [Prevotella timonensis CRIS 5C-B1] gi|281305599|gb|EFA97652.1| riboflavin biosynthesis protein RibD [Prevotella timonensis CRIS 5C-B1] Length = 314 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 17/149 (11%) Query: 4 GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++M L+ A+ A + VGAV V ++II + AHAE+ A Sbjct: 9 DKMYMRRCLQLAKQGRALAKPNPMVGAVLVCGDRIIGEGYHIKYGE----AHAEVNAF-A 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 R + +LPE LYV+LEPC CA I R++R+ G + G Sbjct: 64 AVRQQDEHLLPESTLYVSLEPCSHYGKTPPCADLIVEKRVKRVVCGCIDVFAKVQGRGID 123 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ + + + F Sbjct: 124 KLRKAG----IEVTVGVLEEECKLLNRQF 148 >gi|257052125|ref|YP_003129958.1| CMP/dCMP deaminase zinc-binding [Halorhabdus utahensis DSM 12940] gi|256690888|gb|ACV11225.1| CMP/dCMP deaminase zinc-binding [Halorhabdus utahensis DSM 12940] Length = 155 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 42/143 (29%), Positives = 61/143 (42%), Gaps = 10/143 (6%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+ + VGA+ V N I++ E D TAH+EI IR C Sbjct: 17 NEELMRTAISLGTDPEA-----VGALLVKNGDIVASGTGAIFERPDATAHSEIEVIREAC 71 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG----GGIENGTQFYTL 119 + L E L LY T EPC MC AA ARI + Y ++ G I + + Sbjct: 72 QRLDSERLDGCWLYSTHEPCPMCTAACCWARIEGVVYALTDEDMPADWGTIFSAVSAREI 131 Query: 120 A-TCHHSPEIYPGISEQRSRQII 141 +C H PE++ G + +++ Sbjct: 132 RDSCEHRPELHDGFMHAEATRLL 154 >gi|126323601|ref|XP_001371730.1| PREDICTED: similar to hCG22695, [Monodelphis domestica] Length = 538 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 72/185 (38%), Gaps = 45/185 (24%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 K +M A+ AQ A + +GAV V + + G+ R + HA ++ I + Sbjct: 354 KMQAYMEQAIWAAQQGAEKGMKSIGAVVVDPATETVLAVGHDCRSASNPLLHATMVCIDL 413 Query: 62 GCR------------------ILSQEILP-------------------------EVDLYV 78 + L L +LY+ Sbjct: 414 VAQGQGRGTYNFKSYPACTVSPLGNRDLSASKSIRAGTIRKLESRDDELPYICTGYELYI 473 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 T EPC MCA A+ +RI+R++YG ++P G + + +T +H E++ GI E R Sbjct: 474 TSEPCVMCAMALVHSRIQRVFYGIASPD-GALGTKYKIHTRQDLNHRFEVFRGILEDRCY 532 Query: 139 QIIQD 143 +I+D Sbjct: 533 SLIKD 537 >gi|323484047|ref|ZP_08089417.1| hypothetical protein HMPREF9474_01166 [Clostridium symbiosum WAL-14163] gi|323402489|gb|EGA94817.1| hypothetical protein HMPREF9474_01166 [Clostridium symbiosum WAL-14163] Length = 370 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 56/157 (35%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M AL A+ VGAV V ++I R ++ HAE A Sbjct: 1 MLNDEKYMRMALSLARKGCGLAAPNPMVGAVIVKEGRVIGRGYHQKYGG----PHAEQNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + E +YVTLEPC C AI A I R+ G+++P Sbjct: 57 L-----SSCTEPPQGAVMYVTLEPCCHSGKQPPCVKAILQAEISRVVVGSADPNPLVGGK 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + H + I + ++ + FF R Sbjct: 112 GIRILRE----HGVSVTEDILREECAKLNEVFFHYIR 144 >gi|188534657|ref|YP_001908454.1| Riboflavin biosynthesis protein RibD [Erwinia tasmaniensis Et1/99] gi|188029699|emb|CAO97578.1| Riboflavin biosynthesis protein RibD [Erwinia tasmaniensis Et1/99] Length = 367 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 60/155 (38%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + V+M+ ALE A+ P VG V V +++I+ + HAE+ A+R Sbjct: 2 RDEVYMARALELARRGRFTTTPNPNVGCVLVRDDQIVGEGYHLRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C A+ A ++R+ +P G Sbjct: 58 MAGEKS-----RGATVYVTLEPCSHHGRTPPCCDALIAAGVKRVVTAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ Q + + + F K R Sbjct: 113 YRLQQAG----IEVSHGLMMQEAEALNRGFLKRMR 143 >gi|183601038|ref|ZP_02962531.1| hypothetical protein PROSTU_04659 [Providencia stuartii ATCC 25827] gi|188019376|gb|EDU57416.1| hypothetical protein PROSTU_04659 [Providencia stuartii ATCC 25827] Length = 371 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +++ ++M+ ALE AQ + P VG V V + +I+ ++ HAE+ A Sbjct: 2 IEQDRIYMARALELAQKGRFTTSPNPNVGCVIVRDGEIVGEGYHQKAGE----PHAEVHA 57 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM YVTLEPC CA A+ A +RR+ +P Sbjct: 58 LRMAGEKA-----KGATAYVTLEPCSHHGRTPPCAEALINAGVRRVVAAMQDPNPQVAGR 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + A E G+ + + + + F K R Sbjct: 113 GLYMLSQAG----IETASGVLMEEAESLNRGFLKRMR 145 >gi|153940820|ref|YP_001392147.1| riboflavin biosynthesis protein RibD [Clostridium botulinum F str. Langeland] gi|152936716|gb|ABS42214.1| riboflavin biosynthesis protein RibD [Clostridium botulinum F str. Langeland] gi|295320152|gb|ADG00530.1| riboflavin biosynthesis protein RibD [Clostridium botulinum F str. 230613] Length = 365 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 25/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M+ N +M AL+ A+ ++ P VGA+ V NNKII ++ HAE+ Sbjct: 1 MEDYNFYMEKALKLAERG--EGKVNPNPKVGAIVVKNNKIIGEGYHKYFGG----PHAEV 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+R +YVTLEPC CA +I I + +P Sbjct: 55 YALREAGEKA-----KGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVE 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G E+ GI E+ S+++ + F K Sbjct: 110 GRGIDILKQNG----IEVVTGIMEKESKKLNEVFIK 141 >gi|298209105|ref|YP_003717284.1| riboflavin biosynthesis protein RibD [Croceibacter atlanticus HTCC2559] gi|83849032|gb|EAP86901.1| riboflavin biosynthesis protein RibD [Croceibacter atlanticus HTCC2559] Length = 333 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 19/153 (12%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M ++ L+ A+ VG+V V +NKII ++ L AHAE+ A Sbjct: 1 MNSHKTYIKRCLQLAKKGLGTTYPNPMVGSVIVYDNKIIGEGWHQIAGL----AHAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + + +L + +YV+LEPC CA I I + G +P Sbjct: 57 INA---VKDKSLLKKSTIYVSLEPCSHYGKTPPCADLIIANNIPNVVIGTVDPFAKVKGQ 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A C +I G+ E +++ + FF Sbjct: 114 GIKKLLDAGC----KITVGVLEDECQELNKRFF 142 >gi|256027507|ref|ZP_05441341.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Fusobacterium sp. D11] gi|289765470|ref|ZP_06524848.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium sp. D11] gi|289717025|gb|EFD81037.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium sp. D11] Length = 370 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 60/155 (38%), Gaps = 25/155 (16%) Query: 2 KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 +M+ A+E A+ + P VGAV V + KII ++ HAE+ Sbjct: 4 NSDEKYMARAIELAKRG--TGSVNPNPLVGAVVVKDGKIIGEGWHKKYGG----PHAEVW 57 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ E +YVTLEPC CA I A I++ +P Sbjct: 58 ALNEAG-----ENAKGATIYVTLEPCSHQGKTPPCAKRIIEAGIKKCVVACIDPNPLVAG 112 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A E+ GI E+ ++ + + F K Sbjct: 113 KGIKIIEDAG----IEVKLGILEKEAKDVNKIFLK 143 >gi|239816940|ref|YP_002945850.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110] gi|239803517|gb|ACS20584.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110] Length = 176 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 11/149 (7%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ ++ A+ + A R P G+V V ++++ A N N E D TAHAE+ A+R Sbjct: 20 ERDGRYLRKAIVWSHAARRRGNRPFGSVIVSAAGEVLAEAANSNTESGDCTAHAEMNALR 79 Query: 61 M-GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R L++E L +Y + EPC MCA AI + I R+ +G + Q Sbjct: 80 ALAGRGLTREELAGATIYASGEPCVMCAGAIFWSNIGRVVFGIDAERLRVFRGERQDQRD 139 Query: 120 ATC---------HHSPEIYPGISEQRSRQ 139 A H E + Sbjct: 140 AELSCRDVFRASPHPIECIGPALLDEASA 168 >gi|170751807|ref|YP_001758067.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM 2831] gi|170658329|gb|ACB27384.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM 2831] Length = 152 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 32/107 (29%), Positives = 50/107 (46%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M + A+ A P GAV V + ++ RA N D +AHAE++A+R Sbjct: 1 MSTHEDHIREAVALAAANVEAGGAPYGAVIVRDGAVLVRAANTVHATNDPSAHAEMVALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 R+L + L + +Y + PC MC AA+ LA + Y+ S + Sbjct: 61 EASRLLGRRDLGDCVMYASGRPCPMCHAAMRLAGFKEGYFAFSAEEA 107 >gi|34810531|pdb|1P6O|A Chain A, The Crystal Structure Of Yeast Cytosine Deaminase Bound To 4(R)-Hydroxyl-3,4-Dihydropyrimidine At 1.14 Angstroms. gi|34810532|pdb|1P6O|B Chain B, The Crystal Structure Of Yeast Cytosine Deaminase Bound To 4(R)-Hydroxyl-3,4-Dihydropyrimidine At 1.14 Angstroms. gi|46015452|pdb|1RB7|A Chain A, Yeast Cytosine Deaminase Crystal Form P212121 With Sodium Acetate. gi|46015453|pdb|1RB7|B Chain B, Yeast Cytosine Deaminase Crystal Form P212121 With Sodium Acetate Length = 161 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 13/150 (8%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59 K M A EEA +P+G + + ++ R N + T H EI + Sbjct: 12 KWDQKGMDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL 71 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYT 118 R+ ++ + LY TL PC MC AI + I R G + N K G + Sbjct: 72 ENCGRLEG-KVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFKSKGEK------Y 124 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148 L T H + + ++R ++I++ F ER Sbjct: 125 LQTRGHEVVV---VDDERCKKIMKQFIDER 151 >gi|225555098|gb|EEH03391.1| tRNA specific adenosine deaminase [Ajellomyces capsulatus G186AR] Length = 234 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 35/146 (23%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +K FM AL+ T HAE LAI Sbjct: 87 QKHEYFMEKALDM-----------------------------------GTRHAEFLAIEE 111 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + I E DLYVT+EPC MCA+A+ +IR +Y+G +N + GG ++ Sbjct: 112 VLRNYPRSIFRETDLYVTVEPCIMCASALRQYQIRHVYFGCANERFGGTGGVLNLHSDPG 171 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147 + G+ + + +++ F+ + Sbjct: 172 IDPPYGLTGGLFRREAIMLLRRFYIQ 197 >gi|258515514|ref|YP_003191736.1| riboflavin biosynthesis protein RibD [Desulfotomaculum acetoxidans DSM 771] gi|257779219|gb|ACV63113.1| riboflavin biosynthesis protein RibD [Desulfotomaculum acetoxidans DSM 771] Length = 367 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 40/151 (26%), Positives = 59/151 (39%), Gaps = 21/151 (13%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL+ A A R P VG+V V N ++ R + K T HAEI A++ Sbjct: 2 DEQYMKMALDLAARARGRTSPNPMVGSVIVKNGAVVGRGYH----KKAGTPHAEIHALKE 57 Query: 62 GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +YVTLEPC C AI A I+R ++P G Sbjct: 58 AGEAA-----RGATIYVTLEPCCHHGRTGPCTEAILSAGIKRAVVAMTDPNPLVAGKGLD 112 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ G+ + + ++ + F K Sbjct: 113 ILRKAG----VEVVSGLLAEEAAKLNEVFIK 139 >gi|239827589|ref|YP_002950213.1| riboflavin biosynthesis protein RibD [Geobacillus sp. WCH70] gi|239807882|gb|ACS24947.1| riboflavin biosynthesis protein RibD [Geobacillus sp. WCH70] Length = 361 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 23/154 (14%) Query: 1 MKKGNVFMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M+ +M A+E A+ + N + VGAV V + +I+ + HAE+ Sbjct: 1 MRNDEQYMRLAIEIAKAGIGQTSPNPV-VGAVVVKDGEIVGFGAHLKAGEL----HAEVH 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AIRM +YVTLEPC CA + ++R+ ++P Sbjct: 56 AIRMAGEKA-----KGSTVYVTLEPCSHYGKTPPCADLLVETGVQRVVIATTDPNPLVAG 110 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A ++ G+ ++ + ++ + FF Sbjct: 111 KGIEKLRSAG----IDVKLGVLKEEADELNRVFF 140 >gi|88801234|ref|ZP_01116773.1| riboflavin biosynthesis protein [Reinekea sp. MED297] gi|88776020|gb|EAR07256.1| riboflavin biosynthesis protein [Reinekea sp. MED297] Length = 366 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 23/158 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M + +M+ AL+ A P VG V V + +++ +R K T HAE+ Sbjct: 5 MTSHDAWMAQALKLAARGRRTT-TPNPNVGCVIVRDGELVGSGYHR----KAGTPHAEVH 59 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ YVTLEPC CA A+ A + + ++P Sbjct: 60 ALAEAGSKA-----RGATAYVTLEPCSHYGKTPPCADALIKAGVANVVCAMTDPNPQVAG 114 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + + E+ G+ + ++ + F K R Sbjct: 115 QGLEKLR----NAGIEVISGVLNAEAERLNRGFLKRMR 148 >gi|148508325|gb|ABQ76108.1| cytosine/adenosine deaminases [uncultured haloarchaeon] Length = 153 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 1/144 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M+ A+E A+ AA R + P G+V V ++ I+ R NR D+ H E+ Sbjct: 8 RSHEAHMTEAIELAREAADRGDDPFGSVLVRDDTIVMRESNREHTESDIRRHPELHLAYR 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA-SNPKGGGIENGTQFYTLA 120 C+ S + + +Y + EPC MCA ++ A + Y ++ I + + Sbjct: 68 ACQAYSPQERAMMAMYTSTEPCPMCAGGMTTAHFGSVIYSVGTDELAQFIGSQSPVRAED 127 Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144 E++ + R+I Q+F Sbjct: 128 ILSGVTEVHGPVLNDDGRRIHQEF 151 >gi|291616522|ref|YP_003519264.1| RibD [Pantoea ananatis LMG 20103] gi|291151552|gb|ADD76136.1| RibD [Pantoea ananatis LMG 20103] Length = 367 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ ALE A+ P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 TDERYMARALELARRGRFTTTPNPNVGCVIVRDGQIVGEGWHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAG-----DRARGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ Q + + + F K R Sbjct: 113 HRLHQAG----IEVSHGLMMQEAEALNRGFLKRMR 143 >gi|327392953|dbj|BAK10375.1| riboflavin biosynthesis protein ribD [Pantoea ananatis AJ13355] Length = 367 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ ALE A+ P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 TDERYMARALELARRGRFTTTPNPNVGCVIVRDGQIVGEGWHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAG-----DRARGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ Q + + + F K R Sbjct: 113 HRLHQAG----IEVSHGLMMQEAEALNRGFLKRMR 143 >gi|115955248|ref|XP_001190079.1| PREDICTED: similar to DEADC1 protein [Strongylocentrotus purpuratus] Length = 108 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 6/97 (6%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A+ A+ A R E+PVG + V ++II GN E K+ T HAEILA+ Sbjct: 9 DEKWMKEAVNMAKQALGRGEVPVGCLLVYEDQIIGTGGNAANETKNATRHAEILALEEAM 68 Query: 64 RILSQEIL------PEVDLYVTLEPCTMCAAAISLAR 94 R + L + L+VT+EPC MCA A+ + Sbjct: 69 RWCDDKQLERGELFSQTKLFVTVEPCIMCAGALRIMG 105 >gi|114794616|pdb|2HXV|A Chain A, Crystal Structure Of A Diaminohydroxyphosphoribosylaminopyrimidine Deaminase 5-Amino-6-(5-Phosphoribosylamino)uracil Reductase (Tm1828) From Thermotoga Maritima At 1.80 A Resolution Length = 360 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 40/149 (26%), Positives = 61/149 (40%), Gaps = 20/149 (13%) Query: 5 NVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 F A+E A+ R PVGAV V + +II+ + HAE AI Sbjct: 15 ETFXKRAIELAKKGLGRVNPNPPVGAVVVKDGRIIAEGFHPYFGG----PHAERXAIESA 70 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + E L L VTLEPC C I + I+ + G +P NG + Sbjct: 71 RKK--GEDLRGATLIVTLEPCDHHGKTPPCTDLIIESGIKTVVIGTRDPNP-VSGNGVEK 127 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + +H E+ G+ E+ +++ +FF Sbjct: 128 FR----NHGIEVIEGVLEEEVKKLC-EFF 151 >gi|257468833|ref|ZP_05632927.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Fusobacterium ulcerans ATCC 49185] gi|317063083|ref|ZP_07927568.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium ulcerans ATCC 49185] gi|313688759|gb|EFS25594.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium ulcerans ATCC 49185] Length = 358 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 59/153 (38%), Gaps = 25/153 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M ALE A A + P VGAV V + KI+ +R HAE+ A+ Sbjct: 2 DKKYMERALELA--ALGEGNVNPNPMVGAVVVKDGKILGEGYHRKYGG----PHAEVFAL 55 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 +YVTLEPC CA I I+R + +P G Sbjct: 56 EEAGEKA-----KGATIYVTLEPCSHYGKTPPCAKKIIDMGIKRCVIASLDPNPLVSGRG 110 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + T A E+ GI E+ + ++ + F K Sbjct: 111 IKMMTDAG----IEVITGIMEKEALELNRVFMK 139 >gi|150016108|ref|YP_001308362.1| riboflavin biosynthesis protein RibD [Clostridium beijerinckii NCIMB 8052] gi|149902573|gb|ABR33406.1| riboflavin biosynthesis protein RibD [Clostridium beijerinckii NCIMB 8052] Length = 361 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 21/151 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M ALE A+ N P VGAV V +N+II + AHAE A++ Sbjct: 2 DEKYMEIALELAKRGIGKVNPNPLVGAVIVKDNEIIGEGYHECYGE----AHAERNAVKN 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + + E +YVTLEPC C I + +R+ G +P + +G Sbjct: 58 A-----TKSVEESTIYVTLEPCAHYGKTPPCVDLIIEKKFKRVVIGMLDPNE--LVSGKS 110 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 L H E+ GI E+ +++ + F K Sbjct: 111 VEKLKQ--HGIEVVVGIKEKECKELNEIFIK 139 >gi|168214536|ref|ZP_02640161.1| riboflavin biosynthesis protein RibD [Clostridium perfringens CPE str. F4969] gi|170714018|gb|EDT26200.1| riboflavin biosynthesis protein RibD [Clostridium perfringens CPE str. F4969] Length = 366 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 40/149 (26%), Positives = 59/149 (39%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM ALE A+ N P VGAV V +II + + HAEI AI Sbjct: 2 DEFFMKKALELARKGEGYVNPNPLVGAVIVKGGEIIGQGYHEFFGGN----HAEINAINS 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 S + + +YVTLEPC C AI + +R+ G +P G + Sbjct: 58 -----SIKSIEGATIYVTLEPCCHYGKTPPCVEAIIKNKFKRVVVGTLDPNPLVSGKGIR 112 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + E+ G+ E+ ++ + F Sbjct: 113 ILRESG----IEVNVGVLEKECIRLNEIF 137 >gi|8039802|sp|P50853|RIBD_ACTPL RecName: Full=Riboflavin biosynthesis protein RibD; Includes: RecName: Full=Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase; Includes: RecName: Full=5-amino-6-(5-phosphoribosylamino)uracil reductase; AltName: Full=HTP reductase Length = 376 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+ A+ N P VG V V N +I++ + HAE A+ Sbjct: 14 TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAV- 68 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +E L YVTLEPC C+ + I++++ G+S+P G Sbjct: 69 ----LHCKEDLSGATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGA 124 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ ++ + FF Sbjct: 125 NQLRQAG----VEVVEGLLKEECDALNPIFF 151 >gi|126207866|ref|YP_001053091.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae L20] gi|1173516|gb|AAA86522.1| riboflavin-specific deaminase [Actinobacillus pleuropneumoniae] gi|126096658|gb|ABN73486.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 410 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+ A+ N P VG V V N +I++ + HAE A+ Sbjct: 48 TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAV- 102 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +E L YVTLEPC C+ + I++++ G+S+P G Sbjct: 103 ----LHCKEDLSGATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGA 158 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ ++ + FF Sbjct: 159 NQLRQAG----VEVVEGLLKEECDALNPIFF 185 >gi|303252625|ref|ZP_07338788.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302648593|gb|EFL78786.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 379 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+ A+ N P VG V V N +I++ + HAE A+ Sbjct: 17 TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAV- 71 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +E L YVTLEPC C+ + I++++ G+S+P G Sbjct: 72 ----LHCKEDLSGATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGA 127 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ ++ + FF Sbjct: 128 NQLRQAG----VEVVEGLLKEECDALNPIFF 154 >gi|32455816|ref|NP_862468.1| hypothetical protein pADP-1_p031 [Pseudomonas sp. ADP] gi|13937453|gb|AAK50264.1|U66917_31 hypothetical protein [Pseudomonas sp. ADP] gi|12644709|gb|AAK00500.1| cytosine deaminase-like protein [Acidovorax citrulli] Length = 158 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 + A+EEA+ + L +P+G+V V K++SR N + HAE+ A+ R Sbjct: 11 LQIAIEEAEASFLEGGLPIGSVLVHRGKLVSRGRNLRAQTGSTLHHAEMTALANAGRQPP 70 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 + E LY TL PC MC A+ L I ++ G + G + + E Sbjct: 71 EFY-RETVLYTTLSPCPMCTGAMILYGIPKVVIGTPTVREWGEDRLREL--------GVE 121 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 + + +++ ++R Sbjct: 122 VV-HTRSEACAELLSRMITQQR 142 >gi|206969393|ref|ZP_03230348.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH1134] gi|206736434|gb|EDZ53592.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH1134] Length = 367 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 23/153 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M + ++M ALE A A P VG+V V +N+I+ + HAEI Sbjct: 1 MLEHELYMKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGE----PHAEIH 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 AIRM E +YVTLEPC+ CA AI A I+++ +P Sbjct: 56 AIRMAG-----EQARGGTIYVTLEPCSHHGRTGPCAGAIVQAGIKKVVVATLDPNPLVSG 110 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ E+ S+++ + F Sbjct: 111 RGIKILQDAG----IEVLVGVCEEESKKMNEVF 139 >gi|301308353|ref|ZP_07214307.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 20_3] gi|300833823|gb|EFK64439.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 20_3] Length = 359 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 23/150 (15%) Query: 5 NVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ +E A+ R + P VGAV V +II +R AHAE+ AI Sbjct: 6 EKYMARCIELAKGG--RGNVSPNPMVGAVVVHKGRIIGEGFHRKCGE----AHAEVNAI- 58 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + + +L + +YV+LEPC CA I I R+ G +P G Sbjct: 59 --ASVKDESLLKDSTIYVSLEPCSHYGKTPPCAELIIRKGIPRVVVGCLDPFPEVSGRGV 116 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ E+ +R + + F Sbjct: 117 RMLREAG----VEVVTGVMEEEARALNKAF 142 >gi|255012465|ref|ZP_05284591.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 2_1_7] Length = 359 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 23/150 (15%) Query: 5 NVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ +E A+ R + P VGAV V +II +R AHAE+ AI Sbjct: 6 EKYMARCIELAKGG--RGNVSPNPMVGAVVVHKGRIIGEGFHRKCGE----AHAEVNAI- 58 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + + +L + +YV+LEPC CA I I R+ G +P G Sbjct: 59 --ASVKDESLLKDSTIYVSLEPCSHYGKTPPCAELIIRKGIPRVVVGCLDPFPEVSGRGV 116 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ E+ +R + + F Sbjct: 117 RMLREAG----VEVVTGVMEEEARALNKAF 142 >gi|227358137|ref|ZP_03842478.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Proteus mirabilis ATCC 29906] gi|227161473|gb|EEI46510.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Proteus mirabilis ATCC 29906] Length = 385 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+E A + P VG V V KII + + HAE+ A+ Sbjct: 17 NDETYMRRAIELAALGRFTTSPNPNVGCVIVKEGKIIGEGYHHHAGG----PHAEVNALN 72 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M E +YVTLEPC CA A+ A ++R+ +P G Sbjct: 73 MAG-----ENAKGATVYVTLEPCSHFGKTPPCADALINAGVKRVVAAMQDPNPQVAGRGL 127 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ Q + ++ FFK R Sbjct: 128 HKLVAAG----IDVSHGVLMQEAEKLNIGFFKRMR 158 >gi|312141603|ref|YP_004008939.1| cmp/dcmp deaminase [Rhodococcus equi 103S] gi|311890942|emb|CBH50261.1| CMP/dCMP deaminase [Rhodococcus equi 103S] Length = 156 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 44/94 (46%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ ++ A+ P AV V + ++++ + NR + D TAHAEILAI C L Sbjct: 3 FVQRTIDLARQNVTEGGRPFAAVIVKDGEVLAESPNRVAQTGDPTAHAEILAISQACTEL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E L +YV PC MC ++ + + Sbjct: 63 GTEHLTGTTIYVLAHPCPMCLGSLYYCSPDEVVF 96 >gi|167464708|ref|ZP_02329797.1| riboflavin specific deaminase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 341 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI-PV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++M AL+ A+ A + + PV G V V + +II + +R HAE+ A++ Sbjct: 5 QDEMYMRLALDMAKGAKGQTGVNPVVGCVLVKDGRIIGMGAHLHRGQG----HAEVHALQ 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C+ + ++R+ A +P G Sbjct: 61 MAGAEA-----EGSTAYVTLEPCSHFGKTPPCSGRLIDHGVKRVVIAAVDPNPQVAGAGI 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ + + + + F Sbjct: 116 ERLRSAG----IEVDVGLLAEEASAMNEAF 141 >gi|78063661|ref|YP_373569.1| cytidine/deoxycytidylate deaminase [Burkholderia sp. 383] gi|77971546|gb|ABB12925.1| Cytidine/deoxycytidylate deaminase [Burkholderia sp. 383] Length = 155 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 47/94 (50%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ ++ A P V V + +I++ + N + D TAHAEILA+R CR L Sbjct: 3 FVKRTIDLAMKNVEEGGRPFATVIVRDGEIVAESPNLVAQTSDPTAHAEILAVRDACRKL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E L + ++Y+ PC MC ++ +R+ Y Sbjct: 63 GTEHLTDCEIYILASPCPMCLGSLYYCSPKRVVY 96 >gi|255715725|ref|XP_002554144.1| KLTH0E15290p [Lachancea thermotolerans] gi|238935526|emb|CAR23707.1| KLTH0E15290p [Lachancea thermotolerans] Length = 152 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 11/143 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A +EA +P+G + + ++ N + T H EI + R+ Sbjct: 9 MEIAYKEAAKGMEEGGVPIGGCLIDNRDGTVVGSGHNMRFQKGSATLHGEISTLENCGRM 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + LY TL PC MC AI L I R G +G ++ C Sbjct: 69 KGS-VYKNCTLYTTLSPCDMCTGAILLYGIPRCVVG---ENVNFKGDGERYLAERGCEVR 124 Query: 126 PEIYPGISEQRSRQIIQDFFKER 148 + +++ ++I++ F ER Sbjct: 125 V-----VDDEKCKKIMKQFIDER 142 >gi|256839100|ref|ZP_05544610.1| riboflavin biosynthesis protein RibD [Parabacteroides sp. D13] gi|256740019|gb|EEU53343.1| riboflavin biosynthesis protein RibD [Parabacteroides sp. D13] Length = 359 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 23/150 (15%) Query: 5 NVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ +E A+ R + P VGAV V +II +R AHAE+ AI Sbjct: 6 EKYMARCIELAKGG--RGNVSPNPMVGAVVVHKGRIIGEGFHRKCGE----AHAEVNAI- 58 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + + +L + +YV+LEPC CA I I R+ G +P G Sbjct: 59 --ASVKDESLLKDSTIYVSLEPCSHYGKTPPCAELIIRKGIPRVVVGCLDPFPEVSGRGV 116 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ E+ +R + + F Sbjct: 117 RMLREAG----VEVVTGVMEEEARALNKAF 142 >gi|311277409|ref|YP_003939640.1| CMP/dCMP deaminase zinc-binding protein [Enterobacter cloacae SCF1] gi|308746604|gb|ADO46356.1| CMP/dCMP deaminase zinc-binding protein [Enterobacter cloacae SCF1] Length = 151 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 4/142 (2%) Query: 7 FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A++ + N P GA V N +++ N D +AHAE++AIR C+ Sbjct: 3 YMKLAVDATIHGMENNIGGPFGATIVRNGEVVVAISNTMTRDTDPSAHAELVAIREACKK 62 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + ++Y T EPC MC A I I+++YY +++ Q Sbjct: 63 RGTFDLSDCEIYATCEPCPMCVAVIIWTGIKKVYYCSTHHDAHTHGFSDQHLRDYFSGKD 122 Query: 126 PEIYPGIS---EQRSRQIIQDF 144 I+ + ++ F Sbjct: 123 TSCLDMINVAKREDCDRLFSYF 144 >gi|323306816|gb|EGA60101.1| Fcy1p [Saccharomyces cerevisiae FostersO] Length = 158 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 58/149 (38%), Gaps = 11/149 (7%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59 K M A EEA +P+G + + ++ R N + T H EI + Sbjct: 9 KWDQKGMDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL 68 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R+ ++ + LY TL PC MC AI + I R G N L Sbjct: 69 ENCGRLEG-KVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVG-ENXNFKSKGEKY----L 122 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148 T H + + ++R ++I++ F ER Sbjct: 123 QTRGHEVVV---VDDERCKKIMKQFIDER 148 >gi|323331315|gb|EGA72733.1| Fcy1p [Saccharomyces cerevisiae AWRI796] Length = 153 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 13/150 (8%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59 K M A EEA +P+G + + ++ R N + T H EI + Sbjct: 4 KWDQKGMDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYT 118 R+ ++ + LY TL PC MC AI + I R G + N K G + Sbjct: 64 ENCGRLEG-KVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFKSKGEK------Y 116 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148 L T H + + ++R ++I++ F ER Sbjct: 117 LQTRGHEVVV---VDDERCKKIMKQFIDER 143 >gi|85860188|ref|YP_462390.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Syntrophus aciditrophicus SB] gi|85723279|gb|ABC78222.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Syntrophus aciditrophicus SB] Length = 380 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 25/154 (16%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +M AL+ A+ + P VG+V V N++II +R AHAEI A Sbjct: 2 NDEFYMKRALQLARKG--EGWVSPNPMVGSVIVKNDRIIGEGYHRKFGE----AHAEINA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + +E +YV+LEPC C + R +R+ G ++P Sbjct: 56 LNGA-----KESAEGSTIYVSLEPCSHYGKTPPCVERLVACRPKRVVIGTTDPNPLVAGR 110 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G E+ G+ E+ R+I + F K Sbjct: 111 GIGILKRNG----IEVTVGVLEEVCREINESFLK 140 >gi|85014509|ref|XP_955750.1| deoxycytidylate deaminase [Encephalitozoon cuniculi GB-M1] gi|19171444|emb|CAD27169.1| BELONGS TO THE CYTIDINE AND DEOXYCYTIDYLATE DEAMINASE FAMILY [Encephalitozoon cuniculi GB-M1] Length = 150 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 40/147 (27%), Positives = 59/147 (40%), Gaps = 23/147 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A++EA A E+PVG V V N ++S++ N K HAE+++IR Sbjct: 6 TTHSFFMEMAVKEAMRAFDALEVPVGCVVVRNGIVVSKSHNMTNANKSPLDHAEVISIRD 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG---GIENGTQFYT 118 YVT EPC MC + + +YYG N G G + Sbjct: 66 A-------DCSNSTFYVTCEPCIMCMGILGRLKGVEVYYGCRNEVFGSETVCGIGIKSTY 118 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145 L + R +I+Q F+ Sbjct: 119 LP-------------DSRCFEILQRFY 132 >gi|71026495|ref|XP_762917.1| cytidine deaminase [Theileria parva strain Muguga] gi|68349869|gb|EAN30634.1| cytidine deaminase, putative [Theileria parva] Length = 153 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 14/127 (11%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM ALEEA+ A + E+ V + V ++++ + N + T H E+ AI Sbjct: 10 ENFMKLALEEAKKALDKEEVAVACIIVSKATREVVASSSNATNLTYNSTWHCELEAINKL 69 Query: 63 CRILSQ------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 + E L+VT EPC MC A+ L + +YYG N K GG Sbjct: 70 IDMEPNGYKSQQDSGKLREFCSGFVLFVTCEPCIMCTTALQLIGLTEVYYGCKNEKFGGC 129 Query: 111 ENGTQFY 117 + + Sbjct: 130 GSVLSLH 136 >gi|269962351|ref|ZP_06176701.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio harveyi 1DA3] gi|269832847|gb|EEZ86956.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio harveyi 1DA3] Length = 374 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 57/152 (37%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + MS AL+ A+ P VG V V + +I+ + HAE+ A+R Sbjct: 13 QDFEMMSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGE----PHAEVHAMR 68 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC CA + A++ R+ +P G Sbjct: 69 MAGDKA-----EGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGF 123 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q A E+ G+ E + ++ + F K Sbjct: 124 QMLRDAG----VEVQVGLLENEAIELNKGFIK 151 >gi|6325319|ref|NP_015387.1| Fcy1p [Saccharomyces cerevisiae S288c] gi|2493561|sp|Q12178|FCY1_YEAST RecName: Full=Cytosine deaminase; AltName: Full=Cytosine aminohydrolase gi|30750134|pdb|1UAQ|A Chain A, The Crystal Structure Of Yeast Cytosine Deaminase gi|30750135|pdb|1UAQ|B Chain B, The Crystal Structure Of Yeast Cytosine Deaminase gi|805042|emb|CAA89179.1| unknown [Saccharomyces cerevisiae] gi|1314130|emb|CAA95006.1| unknown [Saccharomyces cerevisiae] gi|1762322|gb|AAC13409.1| cytosine deaminase [Saccharomyces cerevisiae] gi|2343114|gb|AAB67713.1| cytosine deaminase [Saccharomyces cerevisiae] gi|151942846|gb|EDN61192.1| cytosine deaminase [Saccharomyces cerevisiae YJM789] gi|190407999|gb|EDV11264.1| cytosine deaminase [Saccharomyces cerevisiae RM11-1a] gi|256268919|gb|EEU04266.1| Fcy1p [Saccharomyces cerevisiae JAY291] gi|259150215|emb|CAY87018.1| Fcy1p [Saccharomyces cerevisiae EC1118] gi|285815591|tpg|DAA11483.1| TPA: Fcy1p [Saccharomyces cerevisiae S288c] gi|323302562|gb|EGA56369.1| Fcy1p [Saccharomyces cerevisiae FostersB] gi|323335147|gb|EGA76437.1| Fcy1p [Saccharomyces cerevisiae Vin13] gi|323346295|gb|EGA80585.1| Fcy1p [Saccharomyces cerevisiae Lalvin QA23] gi|323350206|gb|EGA84353.1| Fcy1p [Saccharomyces cerevisiae VL3] Length = 158 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 13/150 (8%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59 K M A EEA +P+G + + ++ R N + T H EI + Sbjct: 9 KWDQKGMDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL 68 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYT 118 R+ ++ + LY TL PC MC AI + I R G + N K G + Sbjct: 69 ENCGRLEG-KVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFKSKGEK------Y 121 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148 L T H + + ++R ++I++ F ER Sbjct: 122 LQTRGHEVVV---VDDERCKKIMKQFIDER 148 >gi|229916731|ref|YP_002885377.1| riboflavin biosynthesis protein RibD [Exiguobacterium sp. AT1b] gi|229468160|gb|ACQ69932.1| riboflavin biosynthesis protein RibD [Exiguobacterium sp. AT1b] Length = 354 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 24/156 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 MK+ +M A++ A++A + + P VGAV V + +I+ + HAE+ A Sbjct: 1 MKQ---YMEQAIQLAKSADGQTGVNPLVGAVLVKDGRIVGMGAHLKAGE----PHAEVHA 53 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IRM LYVTLEPC CA I + I+R+ +P N Sbjct: 54 IRMAGAAAY-----GATLYVTLEPCSHHGKTPPCADLIVESGIKRVVIAMKDPNPLVAGN 108 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 G A E+ G+ E +R + F + Sbjct: 109 GIMRLQAAG----VEVDVGLLEAEARALNPAFLRSL 140 >gi|331004720|ref|ZP_08328174.1| hypothetical protein HMPREF0491_03036 [Lachnospiraceae oral taxon 107 str. F0167] gi|330409099|gb|EGG88557.1| hypothetical protein HMPREF0491_03036 [Lachnospiraceae oral taxon 107 str. F0167] Length = 160 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 60/156 (38%), Gaps = 12/156 (7%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 KK ++ +E +QNA P GA+ V KI+ N K T HAE Sbjct: 4 KKHEYYLRRCIEISQNARNNGNTPFGAILVDEYGKILLEQENIEITGKICTGHAETTLAE 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGGIENGTQF 116 + S+E L LY T EPC MC AI A I R+ + + + G E F Sbjct: 64 RASHLYSKEFLWRCTLYTTAEPCAMCTGAIYWANIGRVVFAMTERRLLELTGNNEQNPTF 123 Query: 117 Y-----TLATCHHSPEIYPG--ISEQRSRQIIQDFF 145 A E+ + E+ + I + ++ Sbjct: 124 DLPCRKIFAAGQKKIEVIGPVSVLEEEAAAIHKGYW 159 >gi|326941086|gb|AEA16982.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus thuringiensis serovar chinensis CT-43] Length = 365 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 23/153 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M + ++M ALE A A P VG+V V +N+I+ + HAEI Sbjct: 1 MLEHELYMKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGE----PHAEIH 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 AIRM E +YVTLEPC+ CA AI A I+++ +P Sbjct: 56 AIRMAG-----EQARGATIYVTLEPCSHYGRTGPCAEAIVQAGIKKVVVATLDPNPLVSG 110 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ E+ S+++ + F Sbjct: 111 RGIKILQDAG----IEVLVGVCEEESKKMNEVF 139 >gi|50286109|ref|XP_445483.1| hypothetical protein [Candida glabrata CBS 138] gi|49524788|emb|CAG58394.1| unnamed protein product [Candida glabrata] gi|109706861|gb|ABG43005.1| cytosine deaminase [Candida glabrata] gi|109706865|gb|ABG43007.1| cytosine deaminase [Candida glabrata] Length = 155 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 11/143 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A EEA +P+G + + ++ R N + T H EI + R+ Sbjct: 12 MKIAYEEAAKGFEEGGVPIGGCLINNKDGTVLGRGHNMRFQKGSPTLHGEISTLENCGRL 71 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 ++ + LY TL PC MC AI L I R G S+ G ++ Sbjct: 72 EG-KVYKDTTLYTTLSPCDMCTGAILLYGIPRCVIGESDNFK---SPGEEYLKSRG---- 123 Query: 126 PEIYPGISEQRSRQIIQDFFKER 148 E+ ++++ + I++ F R Sbjct: 124 VEVVQ-MNDEPCKAIMKKFIDTR 145 >gi|253681051|ref|ZP_04861854.1| riboflavin biosynthesis protein RibD [Clostridium botulinum D str. 1873] gi|253562900|gb|EES92346.1| riboflavin biosynthesis protein RibD [Clostridium botulinum D str. 1873] Length = 372 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A+E ++ VGA+ V +NKII ++ HAEI A++ Sbjct: 2 DLSYMKRAIELSKLGIGYTYPNPLVGAIIVKDNKIIGEGYHKRFGEN----HAEINALKN 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +E + +YVTLEPC C AI + I+++ G S+P GT+ Sbjct: 58 A-----KEDVSGATMYVTLEPCSHYGKTPPCVNAIIKSGIKKVIIGMSDPNPLVAGRGTR 112 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 E+ GI ++ +++ + F K Sbjct: 113 ILKDNG----IEVVEGILKEEVKKVNEIFIK 139 >gi|146283237|ref|YP_001173390.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas stutzeri A1501] gi|145571442|gb|ABP80548.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas stutzeri A1501] gi|327481632|gb|AEA84942.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas stutzeri DSM 4166] Length = 156 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 52/154 (33%), Gaps = 22/154 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + + A+ A P GA+ V + +++ GN D+T HAE + + Sbjct: 4 DDLALLRKSFDVARRALENGTHPFGAILVGPDGEVLLEQGNAYMPDHDMTGHAERVLMTR 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + E L +Y + EPC MCA A + R+ YG S + Sbjct: 64 ASTRYTPEFLSRCTMYTSAEPCAMCAGAAYWVGLGRVVYGLSE------RSLKDLTGNHP 117 Query: 122 CHH---------------SPEIYPGISEQRSRQI 140 + E+ + E + + Sbjct: 118 ENPTLDLPCRIVFDAGQRKVEVLGPLLEDEAAAL 151 >gi|119394655|gb|ABL74489.1| putative cytidine deaminase [Zea mays] gi|119394657|gb|ABL74490.1| putative cytidine deaminase [Zea mays] Length = 186 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 K + F++ A+EEA + P GAV V N++++ N + D TAHAE+ AIR Sbjct: 29 DKDHKFLTKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L + L + ++Y + EPC MC A+ L+RI+RL YGA I Sbjct: 89 EACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140 >gi|332652827|ref|ZP_08418572.1| riboflavin biosynthesis protein RibD [Ruminococcaceae bacterium D16] gi|332517973|gb|EGJ47576.1| riboflavin biosynthesis protein RibD [Ruminococcaceae bacterium D16] Length = 368 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 57/151 (37%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ ALE A+ VGAV V + +II + + HAE A++ Sbjct: 2 NDTDYMNLALELARRGMGWTSPNPMVGAVLVKDGEIIGQGWHTRYGEL----HAEREALK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 LYVTLEPC C AI A I R+ G+ +P G Sbjct: 58 N-----CTGSPAGTTLYVTLEPCCHQGRQPPCTQAILDAGITRVVVGSDDPNPLVAGKGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + H ++ G+ +Q + Q FF Sbjct: 113 ELLRE----HGIQVETGVCKQACDALNQVFF 139 >gi|46143613|ref|ZP_00134868.2| COG1985: Pyrimidine reductase, riboflavin biosynthesis [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307247384|ref|ZP_07529431.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307260857|ref|ZP_07542543.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306856081|gb|EFM88237.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306869424|gb|EFN01215.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 364 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+ A+ N P VG V V N +I++ + HAE A+ Sbjct: 2 TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAV- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +E L YVTLEPC C+ + I++++ G+S+P G Sbjct: 57 ----LHCKEDLSGATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGA 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ ++ + FF Sbjct: 113 NQLRQAG----VEVVEGLLKEECDALNPIFF 139 >gi|322514846|ref|ZP_08067864.1| riboflavin biosynthesis protein RibD [Actinobacillus ureae ATCC 25976] gi|322119150|gb|EFX91295.1| riboflavin biosynthesis protein RibD [Actinobacillus ureae ATCC 25976] Length = 361 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+ A+ N P VG V V N +I++ + HAE AI Sbjct: 2 TDLDYMRRAIVLAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAI- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +E L E YVTLEPC C+ + I++++ G+S+P G Sbjct: 57 ----LHCKEDLSEATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGA 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ + + FF Sbjct: 113 SQLRQAG----VEVVEGLLKDECDALNPIFF 139 >gi|190149675|ref|YP_001968200.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|189914806|gb|ACE61058.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 379 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+ A+ N P VG V V N +I++ + HAE A+ Sbjct: 17 TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAV- 71 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +E L YVTLEPC C+ + I++++ G+S+P G Sbjct: 72 ----LHCKEDLSGATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGA 127 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ ++ + FF Sbjct: 128 NQLRQAG----VEVVEGLLKEECDALNPIFF 154 >gi|220931842|ref|YP_002508750.1| riboflavin biosynthesis protein RibD [Halothermothrix orenii H 168] gi|219993152|gb|ACL69755.1| riboflavin biosynthesis protein RibD [Halothermothrix orenii H 168] Length = 366 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K +M AL A+ VGAV V ++KI+ +R HAE+ A Sbjct: 1 MDKDIYYMEKALTLARKGVGYTSPNPMVGAVVVRDDKIVGEGHHRYYGG----PHAEVYA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + LYV LEPC C I + ++R+ +P Sbjct: 57 LEEAGEKAF-----GSTLYVNLEPCSHYGKTPPCVFKIIESGVKRVVISMVDPNPRVSGK 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G + A E+ G+ E+++R + + F K Sbjct: 112 GIEMLKKAG----IEVTVGVLEEKARNLNEVFIKN 142 >gi|171779591|ref|ZP_02920547.1| hypothetical protein STRINF_01428 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281693|gb|EDT47127.1| hypothetical protein STRINF_01428 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 351 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N +MS A+ EA+ + VGAV V +N +I+R + + HAE AI Sbjct: 2 DNYYMSQAIAEAKKGFRQTYTNPLVGAVIVKDNHVIARGAHLQYGHE----HAEKNAI-- 55 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + E L + LYVTLEPC C AI A I+++ G +P G Sbjct: 56 -LHCQTPEELVDSTLYVTLEPCHHRGKQPPCTQAILAAGIKKVVVGQLDPNPLVAGKGLA 114 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQ--DFF 145 F E+ G+ E+ +R + +F+ Sbjct: 115 FLKEEG----IEVVTGVLEEEARGLNSHYNFY 142 >gi|78043574|ref|YP_360307.1| riboflavin biosynthesis protein RibD [Carboxydothermus hydrogenoformans Z-2901] gi|77995689|gb|ABB14588.1| riboflavin biosynthesis protein RibD [Carboxydothermus hydrogenoformans Z-2901] Length = 361 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 24/154 (15%) Query: 3 KGNVFMSCALEEAQNAALR---NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58 M AL+ A+ A R N + VGAV V + I+ ++ L HAE A Sbjct: 2 NDQQLMKRALKLAKRALGRTSPNPV-VGAVIVDKDGNIVGEGYHKKAGL----PHAEREA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +++ +YVTLEPC C AI A I+++ +P Sbjct: 57 LKVAGEKA-----RGGTMYVTLEPCCHYGRTPPCTDAIIAAGIKKVVVAVRDPNPKVSGK 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + + E+ G+ + + + + FFK Sbjct: 112 GIEILR----NAGIEVVEGVLAEEAFYLNEKFFK 141 >gi|115713119|ref|XP_781669.2| PREDICTED: similar to DEADC1 protein, partial [Strongylocentrotus purpuratus] Length = 104 Score = 116 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 6/94 (6%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A+ A+ A R E+PVG + V ++II GN E K+ T HAEILA+ Sbjct: 9 DEKWMKEAVNMAKQALGRGEVPVGCLLVYEDQIIGTGGNAANETKNATRHAEILALEEAM 68 Query: 64 RILSQEIL------PEVDLYVTLEPCTMCAAAIS 91 R + L + L+VT+EPC MCA A+ Sbjct: 69 RWCDDKQLERGELFSQTKLFVTVEPCIMCAGALR 102 >gi|226314093|ref|YP_002773989.1| hypothetical protein BBR47_45080 [Brevibacillus brevis NBRC 100599] gi|226097043|dbj|BAH45485.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 150 Score = 116 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Query: 7 FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+E+ P GA V N+II+ NR D + HAE++AIR C+ Sbjct: 3 YMKLAVEKTLEGMNNKLGGPFGAAVVKGNEIIAVCSNRMMADMDPSQHAEMVAIREACKA 62 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L L ++Y T EPC MC AI + I+ ++Y Sbjct: 63 LGTMDLAGCEIYATCEPCPMCVGAIIWSGIKVVHY 97 >gi|332290249|ref|YP_004421101.1| hypothetical protein UMN179_02191 [Gallibacterium anatis UMN179] gi|330433145|gb|AEC18204.1| conserved hypothetical protein [Gallibacterium anatis UMN179] Length = 372 Score = 116 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 62/156 (39%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ + FM+ A+E A+ VG V V N +I+ + + HAE++A+ Sbjct: 8 QQDHQFMALAIELAKKGRFTCTPNPAVGCVLVKNGEIVGKGYHEKAGE----PHAEVMAM 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R YVTLEPC CA + A ++R+ +P G Sbjct: 64 REAGEKA-----NGATAYVTLEPCSHYGRTPPCAKGLIEAGVKRVVAAMQDPNPQVAGRG 118 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + A E G+ +Q++ Q+ + F K R Sbjct: 119 LKMLADAG----IETAVGLLQQQAEQLNKGFLKRMR 150 >gi|269119566|ref|YP_003307743.1| CMP/dCMP deaminase zinc-binding protein [Sebaldella termitidis ATCC 33386] gi|268613444|gb|ACZ07812.1| CMP/dCMP deaminase zinc-binding protein [Sebaldella termitidis ATCC 33386] Length = 160 Score = 116 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 1/106 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 K ++ A+E ++ A P GA+ V II GN K T HAE Sbjct: 4 KSHEFYLERAIEVSKEARESGNTPFGAILVDKEGNIIMEQGNIEITAKKCTGHAEASLAE 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 S+E L + LY T EPC MCA AI A I + Y + + Sbjct: 64 RASHEYSKEFLWDCTLYTTAEPCCMCAGAIYWANIGTVAYAMTEKR 109 >gi|77461240|ref|YP_350747.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pseudomonas fluorescens Pf0-1] gi|77385243|gb|ABA76756.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pseudomonas fluorescens Pf0-1] Length = 376 Score = 116 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 58/152 (38%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM+ ALE A+ + P VG V V + +I+ + HAE+ A+R Sbjct: 10 DAHFMARALELARKGHYTTHPNPRVGCVIVRDGQIVGEGWHERAGE----PHAEVHALRA 65 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A I R+ +P G Q Sbjct: 66 AG-----ERARGATAYVTLEPCSHHGRTPPCADALVNAGIGRVVAAMRDPNPQVAGRGLQ 120 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 T A G+ E +R++ Q F K Sbjct: 121 RLTDAG----IATESGVLEAEARKLNQGFLKR 148 >gi|116694008|ref|YP_728219.1| putative cytosine/adenosine deaminase [Ralstonia eutropha H16] gi|113528507|emb|CAJ94854.1| Putative Cytosine/adenosine deaminase [Ralstonia eutropha H16] Length = 145 Score = 116 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 32/100 (32%), Positives = 48/100 (48%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ A R P GAV VL+ + ++ N D T HAE+ A+R R L Sbjct: 1 MREAVRLAAANRDRGARPFGAVLVLDGEAVATGVNDIVHSHDPTTHAEMEAVRAAARKLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 + L +Y + PC MC AA+++A ++ +YY N Sbjct: 61 RPDLRGSVVYASGHPCPMCLAAMTMAGVQAVYYAFDNHDA 100 >gi|262382448|ref|ZP_06075585.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_33B] gi|262295326|gb|EEY83257.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_33B] Length = 345 Score = 116 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 23/154 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 ++ +M+ +E A+ R + P VGAV V +II +R AHAE+ Sbjct: 2 IEVEEKYMARCIELAKGG--RGNVSPNPMVGAVVVHKGRIIGEGFHRKCGE----AHAEV 55 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 AI + + +L + +YV+LEPC CA I I R+ G +P Sbjct: 56 NAI---ASVKDESLLKDSTIYVSLEPCSHYGKTPPCAELIIRKGIPRVVVGCLDPFPEVS 112 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ E+ +R + + F Sbjct: 113 GRGVRMLREAG----VEVVTGVMEEEARVLNKAF 142 >gi|220910961|ref|YP_002486270.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6] gi|219857839|gb|ACL38181.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6] Length = 160 Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 14/130 (10%) Query: 16 QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75 + ++ IP+GA N +I+ N + D AH E+ A+R R S + Sbjct: 30 RKSSSEGGIPIGAALARNGVVIASGHNERVQNGDPIAHGEMSALRAAGRQRS---YRDTT 86 Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 LY TL PC MC I +I R+ G + G E E+ + + Sbjct: 87 LYTTLAPCAMCTGTIIQFKIPRVVVGEARTFPGEFE----LLRSRG----VEVI--VLDD 136 Query: 136 -RSRQIIQDF 144 R ++++F Sbjct: 137 QRCVDMMREF 146 >gi|27379891|ref|NP_771420.1| cytosine deaminase [Bradyrhizobium japonicum USDA 110] gi|27353044|dbj|BAC50045.1| bll4780 [Bradyrhizobium japonicum USDA 110] Length = 150 Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 13/141 (9%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM A+ EA+ + + +P+GAV +N+II+R N + +V H E+ +R Sbjct: 7 HFDFMLEAIREAEASIAQGGLPIGAVLTRDNQIIARGHNNRVQENNVILHGEMSCLREAG 66 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 I + +Y TL PC+MCA A++L +++ + G S G ++ + + Sbjct: 67 AIT----FHDTIMYTTLSPCSMCAGALALFKVKLVVIGESVTFPG-SKDILDKFGIPWID 121 Query: 124 HSPEIYPGISEQRSRQIIQDF 144 +++ RS +++++ Sbjct: 122 --------LADDRSITMMKNW 134 >gi|299538422|ref|ZP_07051705.1| riboflavin biosynthesis protein ribD [Lysinibacillus fusiformis ZC1] gi|298726009|gb|EFI66601.1| riboflavin biosynthesis protein ribD [Lysinibacillus fusiformis ZC1] Length = 370 Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 60/154 (38%), Gaps = 25/154 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M +M AL+ A A+ + P VGAV V N I+ +R HAE+ Sbjct: 2 MNVDEKYMQLALDLA--ASAKGNTNPNPLVGAVIVKNGVIVGTGLHRKAGE----PHAEV 55 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A RM LYVTLEPC CA + + + R+ +P Sbjct: 56 HAFRMAGEHAM-----GATLYVTLEPCSHYGKTPPCANLVKESGVSRVVVAMQDPNPAVA 110 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A + G+ EQ++R++ + F Sbjct: 111 GRGIQLLQDAG----IVVEVGVLEQQARRLNERF 140 >gi|296503905|ref|YP_003665605.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus thuringiensis BMB171] gi|296324957|gb|ADH07885.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus thuringiensis BMB171] Length = 365 Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 23/153 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M + ++M ALE A A P VG+V V +N+I+ + HAEI Sbjct: 1 MLEHELYMKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGE----PHAEIH 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 AIRM E +YVTLEPC+ CA AI A I+++ +P Sbjct: 56 AIRMAG-----EQARGATIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSG 110 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ E+ S+++ + F Sbjct: 111 RGIKILQDAG----IEVLVGVCEEESKKMNEVF 139 >gi|167768613|ref|ZP_02440666.1| hypothetical protein CLOSS21_03172 [Clostridium sp. SS2/1] gi|167710137|gb|EDS20716.1| hypothetical protein CLOSS21_03172 [Clostridium sp. SS2/1] Length = 361 Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 42/146 (28%), Positives = 59/146 (40%), Gaps = 21/146 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+E A+ N P VGAV V + K+I + HAE A++ Sbjct: 1 MRRAIELAKKGCGYTNPNPLVGAVIVKDQKVIGEGYHEKIGGL----HAERNALKN---- 52 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E ++YVTLEPC C A+ A I+++Y G +P G + Sbjct: 53 -CIEDPKGAEIYVTLEPCCHYGKTPPCTEALIEAGIKKVYVGNLDPNPKVAGGGIKILND 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145 H E GI E+ RQ+ FF Sbjct: 112 ----HGIETETGILEEECRQLNDIFF 133 >gi|206890490|ref|YP_002249110.1| riboflavin biosynthesis protein RibD [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742428|gb|ACI21485.1| riboflavin biosynthesis protein RibD [Thermodesulfovibrio yellowstonii DSM 11347] Length = 370 Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 39/127 (30%), Positives = 54/127 (42%), Gaps = 21/127 (16%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VGAV V N KIIS ++ L HAE AIR E L LYVTLEPC Sbjct: 32 VGAVIVKNGKIISEGYHKKAGL----PHAEAEAIRNA-----NESLKGATLYVTLEPCCH 82 Query: 84 -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 C AI + I R+ G +P G + +H ++ G+ E+ Sbjct: 83 KDKKTPPCTDAIINSGINRVVIGMRDPNPKVSGKGVEILN----NHGIKVIEGVLEEE-V 137 Query: 139 QIIQDFF 145 + + +F+ Sbjct: 138 KKLNEFY 144 >gi|78188601|ref|YP_378939.1| riboflavin biosynthesis protein RibD [Chlorobium chlorochromatii CaD3] gi|78170800|gb|ABB27896.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Chlorobium chlorochromatii CaD3] Length = 366 Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 61/152 (40%), Gaps = 19/152 (12%) Query: 3 KGNVFMSCALEEA-QNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M ALE A + A + P VGA+ V +II + AHAE+ AI Sbjct: 5 EHTFYMQRALELALRGAGRVSPNPMVGALLVQEGEIIGEGWHERYGE----AHAEVNAI- 59 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + ++ L E LYVTLEPC C+ I +I R+ G +P G Sbjct: 60 --AAVTNEAWLREATLYVTLEPCSHFGKTPPCSDLIIAKQIPRVVVGCRDPFPAVAGRGI 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ G+ E Q + F K Sbjct: 118 AKLRAAG----IEVIEGVLEAECLQSNEAFIK 145 >gi|197283994|ref|YP_002149866.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Proteus mirabilis HI4320] gi|194681481|emb|CAR40325.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Proteus mirabilis HI4320] Length = 385 Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+E A + P VG V V KII + + HAE+ A+ Sbjct: 17 NDETYMRRAIELAALGRFTTSPNPNVGCVIVKEGKIIGEGYHHHAGG----PHAEVNALN 72 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M E +YVTLEPC CA A+ A ++R+ +P G Sbjct: 73 MAG-----ENAKGATVYVTLEPCSHFGKTPPCADALINAGVKRVVAAMQDPNPQVAGRGL 127 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ Q + ++ FFK R Sbjct: 128 HKLVAAG----IDVSHGVLMQEAEKLNIGFFKRMR 158 >gi|89894408|ref|YP_517895.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Desulfitobacterium hafniense Y51] gi|89333856|dbj|BAE83451.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Desulfitobacterium hafniense Y51] Length = 372 Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 44/155 (28%), Positives = 64/155 (41%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ N +MS ALE A A R P VG V V + I+ ++ K T HAE+ A Sbjct: 8 MELDNHYMSRALELAALAMGRTSPNPLVGCVIVKDGVIVGEGYHQ----KAGTPHAEVHA 63 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++ E YVTLEPC CA A+ A I+R+ +P Sbjct: 64 LQAAG-----EHARGATAYVTLEPCSHFGKTPPCADALIKAGIQRVVVAMVDPNPLVSGQ 118 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G A ++ G+ E+ +R + + F K Sbjct: 119 GITRLRAAG----IQVDVGLKEKEARTLNKGFLKA 149 >gi|254820531|ref|ZP_05225532.1| cytidine/deoxycytidylate deaminase [Mycobacterium intracellulare ATCC 13950] Length = 166 Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 44/94 (46%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F +E A+ P V V ++++ + NR + D TAHAEILAIR C L Sbjct: 4 FAQRTIELARRNVAEGGRPFATVIVRGGEVLAESANRVAQTNDPTAHAEILAIREACVKL 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E L + +YV PC MC ++ R + + Sbjct: 64 GTEHLVDTTIYVLAHPCPMCLGSLYYCSPREVVF 97 >gi|310766817|gb|ADP11767.1| Riboflavin biosynthesis protein RibD [Erwinia sp. Ejp617] Length = 367 Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++M+ ALE A+ P VG V V + +I+ + HAE+ A+R Sbjct: 2 RDEIYMARALELARRGRFTTTPNPNVGCVLVRDGQIVGEGYHMRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A I+R+ +P G Sbjct: 58 MAGEKS-----LGATAYVTLEPCSHHGRTPPCCEALIAAGIKRVVTAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ Q + + + F K R Sbjct: 113 YRLQQAG----IEVSHGLMMQEAEALNRGFLKRMR 143 >gi|296332262|ref|ZP_06874724.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674964|ref|YP_003866636.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus subtilis subsp. spizizenii str. W23] gi|296150576|gb|EFG91463.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413208|gb|ADM38327.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus subtilis subsp. spizizenii str. W23] Length = 361 Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 21/148 (14%) Query: 5 NVFMSCALEEAQNAALRNE-IP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL+ A+ + E P VGAV V + +I+ + AHAE+ AI M Sbjct: 3 EYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGE----AHAEVHAIHMA 58 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 D+YVTLEPC CA I + I+R++ +P G Sbjct: 59 G-----SHAKGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVAGRGISM 113 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ GI ++ ++ + F Sbjct: 114 IEKAG----IEVKEGILADQAEKLNEKF 137 >gi|254303903|ref|ZP_04971261.1| diaminohydroxyphosphoribosylaminopyrimidine/5-amino-6-(5- phosphoribosylamino)uracil reductase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324095|gb|EDK89345.1| diaminohydroxyphosphoribosylaminopyrimidine/5-amino-6-(5- phosphoribosylamino)uracil reductase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 369 Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 60/153 (39%), Gaps = 25/153 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M+ A+E AQ + P VGAV V + KII ++ HAE+ A+ Sbjct: 6 DEKYMARAIELAQKG--IGGVNPNPLVGAVVVKDGKIIGEGWHKKFGG----PHAEVWAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 E +YVTLEPC CA I A I+R +P G Sbjct: 60 NEAG-----ENAEGATIYVTLEPCSHQGKTPPCARRIVEAGIKRCVVACIDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + A +I G+ E+ ++ + + F K Sbjct: 115 MKIIEEAG----IDIKLGVLEKEAKDVNKIFLK 143 >gi|150388845|ref|YP_001318894.1| riboflavin biosynthesis protein RibD [Alkaliphilus metalliredigens QYMF] gi|149948707|gb|ABR47235.1| riboflavin biosynthesis protein RibD [Alkaliphilus metalliredigens QYMF] Length = 366 Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 56/149 (37%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N +M A+E A+ P VGAV V NNK+I + HAE+ A Sbjct: 2 HNQYMRKAIELAKKGTGHTNPNPLVGAVIVKNNKVIGEGYHHYYGG----PHAEVDAFNN 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E + +YVTLEPC CA AI I ++ +P NG Sbjct: 58 A-----TEDVKGATMYVTLEPCSHYGKTPPCAKAIVEKGIAQVVIAMRDPNPLVAGNGIG 112 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + E+ + E ++ + + F Sbjct: 113 ILRESG----IEVISEVLESEAKNLNEIF 137 >gi|109706863|gb|ABG43006.1| cytosine deaminase [Candida glabrata] Length = 155 Score = 116 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 11/143 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A EEA +P+G + + ++ R N + T H EI + R+ Sbjct: 12 MKIAYEEAAKGFEEGGVPIGGCLINNKDGTVLGRGHNMRFQKGSPTLHGEISTLENCGRL 71 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 ++ + LY TL PC MC AI L I R G S+ G ++ Sbjct: 72 EG-KVYKDTTLYTTLSPCDMCTGAILLYGIPRCVIGESDNFK---SPGEEYLKSRG---- 123 Query: 126 PEIYPGISEQRSRQIIQDFFKER 148 E+ ++++ + I++ F R Sbjct: 124 VEVVQ-MNDEPCKAIMKKFIDTR 145 >gi|242043474|ref|XP_002459608.1| hypothetical protein SORBIDRAFT_02g007460 [Sorghum bicolor] gi|241922985|gb|EER96129.1| hypothetical protein SORBIDRAFT_02g007460 [Sorghum bicolor] Length = 186 Score = 116 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F++ A+EEA + P GAV V N++++ N + D TAHAE+ AIR Sbjct: 29 DRDHKFLTKAVEEAYRGVDNGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L + L + ++Y + EPC MC A+ L+RI+RL YGA I Sbjct: 89 EACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140 >gi|256842978|ref|ZP_05548466.1| riboflavin biosynthesis protein RibD [Lactobacillus crispatus 125-2-CHN] gi|256848647|ref|ZP_05554081.1| riboflavin biosynthesis protein [Lactobacillus crispatus MV-1A-US] gi|262045946|ref|ZP_06018910.1| riboflavin biosynthesis protein RibD [Lactobacillus crispatus MV-3A-US] gi|293381447|ref|ZP_06627444.1| riboflavin biosynthesis protein RibD [Lactobacillus crispatus 214-1] gi|256614398|gb|EEU19599.1| riboflavin biosynthesis protein RibD [Lactobacillus crispatus 125-2-CHN] gi|256714186|gb|EEU29173.1| riboflavin biosynthesis protein [Lactobacillus crispatus MV-1A-US] gi|260573905|gb|EEX30461.1| riboflavin biosynthesis protein RibD [Lactobacillus crispatus MV-3A-US] gi|290921994|gb|EFD98999.1| riboflavin biosynthesis protein RibD [Lactobacillus crispatus 214-1] Length = 353 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 21/152 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M A++EA+ + P VGAV V + I++ + HAE AI Sbjct: 3 NSDEAYMQLAIQEAKKGLYQTWKNPMVGAVIVKDGNILATGHHIRYGYY----HAERDAI 58 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 L+ E L LYVTLEPC C+ I ++I+R+ +P G Sbjct: 59 ----SKLTPEQLFNSTLYVTLEPCSHYGKQPPCSDLIVSSKIKRVVIAQVDPHQLVTGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 H+ ++ G+ E +++++ + F+ Sbjct: 115 IAKLRQ----HNIQVTVGVLEDQAKKLNK-FY 141 >gi|255994555|ref|ZP_05427690.1| riboflavin biosynthesis protein RibD [Eubacterium saphenum ATCC 49989] gi|255993268|gb|EEU03357.1| riboflavin biosynthesis protein RibD [Eubacterium saphenum ATCC 49989] Length = 368 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 18/154 (11%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +K +MS ALE A+ P VGAV V N +II + + K +AHAE+ A Sbjct: 6 IKDKEKYMSMALELAEKGLGTTSPNPMVGAVIVKNGEIIGKGFH----KKAGSAHAEVEA 61 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++ + D+YVTLEPC C+ + +I R++ G +P Sbjct: 62 VQDA--HSKDYDIEGADMYVTLEPCSHKGRTPACSDLLIKEKIGRVFIGMRDPNPLVNGG 119 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A E+ GI E+R RQ+ + F K Sbjct: 120 GIEKLEGALI--KCEV--GILEERCRQLNKVFLK 149 >gi|227877508|ref|ZP_03995573.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Lactobacillus crispatus JV-V01] gi|227862901|gb|EEJ70355.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Lactobacillus crispatus JV-V01] Length = 356 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 21/152 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M A++EA+ + P VGAV V + I++ + HAE AI Sbjct: 6 NSDEAYMQLAIQEAKKGLYQTWKNPMVGAVIVKDGNILATGHHIRYGYY----HAERDAI 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 L+ E L LYVTLEPC C+ I ++I+R+ +P G Sbjct: 62 ----SKLTPEQLFNSTLYVTLEPCSHYGKQPPCSDLIVSSKIKRVVIAQVDPHQLVTGKG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 H+ ++ G+ E +++++ + F+ Sbjct: 118 IAKLRQ----HNIQVTVGVLEDQAKKLNK-FY 144 >gi|320120555|gb|EFE28957.2| riboflavin biosynthesis protein RibD [Filifactor alocis ATCC 35896] Length = 364 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 41/155 (26%), Positives = 61/155 (39%), Gaps = 25/155 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M +M A+E A+ + P VGAV V ++ II + HAE Sbjct: 1 MVFHETYMKTAIELAKKG--EGYVSPNPLVGAVIVKDDIIIGSGYHTKYGGL----HAER 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++ CR +YVTLEPC CA AI + I +Y G+S+P Sbjct: 55 EALKN-CRTSP----KGASMYVTLEPCSHYGKQPPCALAIIESGIDTVYIGSSDPNPEVN 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G Q A ++ G+ ++ + FF Sbjct: 110 GKGIQVLRDAN----IKVVTGLLKEECDSLNTFFF 140 >gi|110802102|ref|YP_697858.1| riboflavin biosynthesis protein RibD [Clostridium perfringens SM101] gi|110682603|gb|ABG85973.1| riboflavin biosynthesis protein RibD [Clostridium perfringens SM101] Length = 365 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 40/149 (26%), Positives = 56/149 (37%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM ALE A+ N P VGAV V +II + HAEI AI Sbjct: 2 DEFFMKKALELARKGEGYVNPNPLVGAVIVKGGEIIGEGYHEFFGGD----HAEINAINS 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + +YVTLEPC C AI + + + G +P NG + Sbjct: 58 SVKST-----EGATIYVTLEPCCHYGKTPPCVEAIIKNKFKTVVVGTLDPNPLVSGNGIK 112 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ ++ + F Sbjct: 113 ILREAG----IEVKVGVLEKECIRLNEIF 137 >gi|183984819|ref|YP_001853110.1| deaminase [Mycobacterium marinum M] gi|183178145|gb|ACC43255.1| deaminase [Mycobacterium marinum M] Length = 166 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 43/94 (45%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F A++ A+ P V V + ++++ + N+ + D TAHAEILAIR C L Sbjct: 4 FAQRAIDLARQNVAEGGRPFATVIVKDGQVLAESANKVAQTNDPTAHAEILAIRAACTKL 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E L YV PC MC ++ + + Sbjct: 64 GTEQLFGTTFYVLAHPCPMCLGSLYYCSPDEVIF 97 >gi|154250091|ref|YP_001410916.1| riboflavin biosynthesis protein RibD [Fervidobacterium nodosum Rt17-B1] gi|154154027|gb|ABS61259.1| riboflavin biosynthesis protein RibD [Fervidobacterium nodosum Rt17-B1] Length = 365 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 19/153 (12%) Query: 2 KKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 K FM A+ A+ + PVGAV V + KI+S ++ HAE AI Sbjct: 8 KVHERFMKLAIVIAKKGIGFVNPNPPVGAVIVKDGKILSMGYHKYYGGY----HAERDAI 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + +YVTLEPC C I + I+ +Y ++P NG Sbjct: 64 LSALNA--GIDISGSTMYVTLEPCDHYGKTPPCTDLIIQSGIKEVYIACTDPNP-ISGNG 120 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + +++ G+ E+ +R++ + FFK Sbjct: 121 AEKLRKNG----VDVHIGLLEEEARELAKFFFK 149 >gi|223939370|ref|ZP_03631249.1| riboflavin biosynthesis protein RibD [bacterium Ellin514] gi|223891974|gb|EEF58456.1| riboflavin biosynthesis protein RibD [bacterium Ellin514] Length = 365 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 18/145 (12%) Query: 8 MSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A+ A P VGAV V + K+I R + HAE+ A++ Sbjct: 1 MQNALALARRAYGNTSPNPLVGAVLVKHGKVIGRGWHHRAGQ----PHAEVEALKDAASK 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + LYVTLEPC C AI A+I+++ A++P Sbjct: 57 GNDP--KGATLYVTLEPCCTHGRTPPCTEAIKAAKIKKVVVAATDPNPAHAGRAFPLLER 114 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ GI + + ++ + F Sbjct: 115 AG----IKVVSGILAEEAGELNESF 135 >gi|307262983|ref|ZP_07544605.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306871609|gb|EFN03331.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 364 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+ A+ N P VG V V N +I++ + HAE A+ Sbjct: 2 TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAV- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +E L YVTLEPC C+ + I++++ G+S+P G Sbjct: 57 ----LHCKEDLSGATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGA 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ ++ + FF Sbjct: 113 NQLRQAG----VEVVEGLLKEECDALNPIFF 139 >gi|29349136|ref|NP_812639.1| riboflavin biosynthesis protein ribD [Bacteroides thetaiotaomicron VPI-5482] gi|29341044|gb|AAO78833.1| riboflavin biosynthesis protein ribD [Bacteroides thetaiotaomicron VPI-5482] Length = 339 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 19/145 (13%) Query: 8 MSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M +E A+N VGAV V + II + AHAE+ AIR + Sbjct: 1 MRRCIELAKNGLCNVAPNPMVGAVIVCDGLIIGEGYHIRCGE----AHAEVNAIRS---V 53 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + +L +YV+LEPC CA I +I R+ G +P G Q Sbjct: 54 KDKSLLSRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSQVAGRGIQKLRD 113 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ R +I+ F Sbjct: 114 AGR----EVTVGVLEKECRYLIRRF 134 >gi|326793810|ref|YP_004311630.1| riboflavin biosynthesis protein RibD [Marinomonas mediterranea MMB-1] gi|326544574|gb|ADZ89794.1| riboflavin biosynthesis protein RibD [Marinomonas mediterranea MMB-1] Length = 383 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 58/157 (36%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+K +MS A++ A+ VG V V +++II + HAE+ A Sbjct: 5 MQKHTEYMSQAVQLAKKGLYTTHPNPRVGCVIVKDDRIIGEGFHARAGEG----HAEVNA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + E + YVTLEPC CA A+ A I + YG +P Sbjct: 61 LASAM-----ESVEGATAYVTLEPCSHQGKTPPCADALIKAGIAVVVYGMQDPNPQVAGR 115 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A ++ + E ++ F K R Sbjct: 116 GLAKLEKAG----VQVIGPVLENECERLNLGFNKRMR 148 >gi|222082119|ref|YP_002541484.1| hypothetical protein Arad_8671 [Agrobacterium radiobacter K84] gi|221726798|gb|ACM29887.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 158 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 56/150 (37%), Gaps = 14/150 (9%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 VF+ + E A A L P GA+ V + ++ N +D+T HAE + + Sbjct: 6 NDEVFLRRSFEVAARARLNGNHPFGAILVGPDGTVLMEQENAYNPTQDMTGHAERVLMTR 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + S L + +Y + EPC MCA A A + R+ YG S + I T Sbjct: 66 ASQQYSPGFLVQCAMYTSAEPCAMCAGAAYWAGVGRVVYGLSESQLKAITG--NHPENPT 123 Query: 122 CH-----------HSPEIYPGISEQRSRQI 140 E+ + + + + Sbjct: 124 LDLPCRVVFEAGQRKVEVVGPMLCEEATAL 153 >gi|187608406|ref|NP_001119919.1| hypothetical protein LOC791769 [Danio rerio] gi|169145700|emb|CAQ15728.1| novel protein similar to vertebrate tRNA-specific adenosine deaminase 3 (ADAT3) [Danio rerio] Length = 336 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 42/172 (24%), Positives = 67/172 (38%), Gaps = 32/172 (18%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59 K +M A++ A++ VGAV V +II+ A + R HA ++ I Sbjct: 167 TKMREYMCVAVKAAKSGRELGMDAVGAVIVDPKTEQIIAVAHDCKRGSH-PLHHAVMVCI 225 Query: 60 RM----------------GCRILSQ------------EILPEVDLYVTLEPCTMCAAAIS 91 + CR I DLYVT EPC MCA A+ Sbjct: 226 DLVACGQDGGAYKYEKYPACRFSCSNSVCDGKETGLPYICTGYDLYVTREPCVMCAMALV 285 Query: 92 LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 +RI R++YGAS G + + + +H E++ G+ + ++ Sbjct: 286 HSRISRVFYGASTAD-GAFGSRYKIHCQKDLNHRFEVFKGVMVNACEDLCKE 336 >gi|22204218|emb|CAD43470.1| novel protein [Danio rerio] Length = 336 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 42/172 (24%), Positives = 67/172 (38%), Gaps = 32/172 (18%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59 K +M A++ A++ VGAV V +II+ A + R HA ++ I Sbjct: 167 TKMREYMCVAVKAAKSGRELGMDAVGAVIVDPKTEQIIAVAHDCKRGSH-PLHHAVMVCI 225 Query: 60 RM----------------GCRILSQ------------EILPEVDLYVTLEPCTMCAAAIS 91 + CR I DLYVT EPC MCA A+ Sbjct: 226 DLVACGQDGGAYNYEKYPACRFSCSNSVCDGKETGLPYICTGYDLYVTREPCVMCAMALV 285 Query: 92 LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 +RI R++YGAS G + + + +H E++ G+ + ++ Sbjct: 286 HSRISRVFYGASTAD-GAFGSRYKIHCQKDLNHRFEVFKGVMVNACEDLCKE 336 >gi|325528019|gb|EGD05243.1| cytidine/deoxycytidylate deaminase [Burkholderia sp. TJI49] Length = 155 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 48/94 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ ++ A P V V + +I++ + N + +D TAHAEILA+R CR L Sbjct: 3 FVKRTIDLAMKNVEEGGRPFATVIVRDGEIVAESPNLVAQTRDPTAHAEILAVRDACRRL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E L + ++Y+ PC MC ++ +R+ Y Sbjct: 63 GTEHLTDCEIYILASPCPMCLGSLYYCSPKRVVY 96 >gi|315224801|ref|ZP_07866622.1| riboflavin biosynthesis protein RibD [Capnocytophaga ochracea F0287] gi|314945204|gb|EFS97232.1| riboflavin biosynthesis protein RibD [Capnocytophaga ochracea F0287] Length = 331 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 19/150 (12%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M ++ A N VG+V V +II ++ AHAE+ AI Sbjct: 9 DEWYMHRCIQLAYNGLGSTYPNPMVGSVIVYEGRIIGEGWHQKAGE----AHAEVRAITS 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + + +LP+ +YV+LEPC CA I +I R+ G ++P G + Sbjct: 65 ---VKDKSLLPKSTIYVSLEPCCHFGKTPPCADLIIAHKIGRVVIGTTDPFAKVHGKGIE 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A C E+ G+ E R++ + FF Sbjct: 122 KLRNAGC----EVTVGVCEAECRELNKRFF 147 >gi|326519634|dbj|BAK00190.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 154 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 1/115 (0%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F+S A+EEA A R P GAV V N+K++ N + D TAHAE+ AIR Sbjct: 9 DREHKFLSIAVEEAYRAVDRGHGRPFGAVVVRNDKVVVSCHNMVVKNTDATAHAEVTAIR 68 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 C+ L + L + ++Y + EPC MC A+ L+RI+RL YGA+ + + Q Sbjct: 69 EACKKLGKTDLSDCEMYASCEPCPMCFGAVRLSRIKRLVYGATAEAAIAMGSCYQ 123 >gi|321311800|ref|YP_004204087.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus subtilis BSn5] gi|320018074|gb|ADV93060.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus subtilis BSn5] Length = 361 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 21/148 (14%) Query: 5 NVFMSCALEEAQNAALRNE-IP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL+ A+ + E P VGAV V + +I+ + AHAE+ AI M Sbjct: 3 EYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGE----AHAEVHAIHMA 58 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 D+YVTLEPC CA I + I+R++ +P G Sbjct: 59 GAHA-----EGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVAGRGISM 113 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ GI ++ ++ + F Sbjct: 114 IKEAG----IEVREGILADQAERLNEKF 137 >gi|255641124|gb|ACU20840.1| unknown [Glycine max] Length = 168 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F++ A+EEA + P GAV VLN++++ N D TAHAE+ AIR Sbjct: 36 DRDHKFLTKAVEEAYKGVECGDGGPFGAVVVLNDEVVVSCHNMVLRNTDPTAHAEVTAIR 95 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L+Q L + ++Y + EPC MC AI L+RI+RL YGA I Sbjct: 96 EACQKLNQIELADCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF 147 >gi|240171878|ref|ZP_04750537.1| deaminase [Mycobacterium kansasii ATCC 12478] Length = 166 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 43/94 (45%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F ++ A+ P V V + +I++ + N+ + D TAHAEILAIR C L Sbjct: 4 FAQRTIDLARQNVAEGGRPFATVIVKDGEILAESANKVAQTNDPTAHAEILAIREACTKL 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E L +YV PC MC ++ + + Sbjct: 64 GTEHLVGTTIYVLAHPCPMCLGSLYYCSPDEVVF 97 >gi|294648973|ref|ZP_06726421.1| riboflavin biosynthesis protein RibD [Acinetobacter haemolyticus ATCC 19194] gi|292825108|gb|EFF83863.1| riboflavin biosynthesis protein RibD [Acinetobacter haemolyticus ATCC 19194] Length = 366 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + + +M A++ A+ P VG V V + +I+ + K HAE+ A Sbjct: 9 LSQAQYWMQRAIDLARLGQYSTKPNPNVGCVIVKDGQILGEGFH----PKAGQPHAEVFA 64 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R E + +YVTLEPC CA A+ A+++++ S+P Sbjct: 65 LRQAG-----ENAKDATVYVTLEPCAHYGRTPPCAEALVKAQVKKVVIACSDPNPLVAGK 119 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G + A E+ G+ + ++ + F K Sbjct: 120 GVKILQDAG----IEVETGVCTENAKGLNLGFLKA 150 >gi|30021491|ref|NP_833122.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus cereus ATCC 14579] gi|29897046|gb|AAP10323.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus cereus ATCC 14579] Length = 302 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 23/153 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M + ++M ALE A A P VG+V V +N+I+ + HAEI Sbjct: 1 MLEHELYMKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGE----PHAEIH 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 AIRM E + +YVTLEPC+ CA AI A I+++ +P Sbjct: 56 AIRMAG-----EQVRGATIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSG 110 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ E+ S+++ + F Sbjct: 111 RGIKILQDAG----IEVLVGVCEEESKKMNEVF 139 >gi|116669980|ref|YP_830913.1| CMP/dCMP deaminase, zinc-binding [Arthrobacter sp. FB24] gi|116610089|gb|ABK02813.1| CMP/dCMP deaminase, zinc-binding protein [Arthrobacter sp. FB24] Length = 161 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 32/96 (33%), Positives = 44/96 (45%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 F+ A++ A P GA+ V + NR D TAHAE++AIR Sbjct: 11 QKFLGQAVDLAVQNVAAGGGPFGALVVTADGTRHFGVNRVTRDNDPTAHAEVVAIRTAAA 70 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + L LY + EPC +C AA ARI R+Y+ Sbjct: 71 ESANFDLSGAVLYASCEPCPLCLAAALWARIDRVYF 106 >gi|153834818|ref|ZP_01987485.1| riboflavin biosynthesis protein RibD [Vibrio harveyi HY01] gi|148868746|gb|EDL67820.1| riboflavin biosynthesis protein RibD [Vibrio harveyi HY01] Length = 374 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + MS AL A+ P VG V V + +I+ + HAE+ A+ Sbjct: 12 SQDFEMMSRALMLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGE----PHAEVHAM 67 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 RM YVTLEPC CA + A++ R+ +P G Sbjct: 68 RMAGDKTQ-----GATAYVTLEPCSHYGRTPPCAEGLIEAKVARVVCAMEDPNPKVAGRG 122 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q A E+ G+ E + ++ + F K Sbjct: 123 FQMLRDAG----VEVQVGLLESEAIELNKGFIK 151 >gi|52627172|ref|NP_001005300.1| tRNA-specific adenosine deaminase-like protein 3 [Danio rerio] gi|147742915|sp|Q8JFW4|ADAT3_DANRE RecName: Full=tRNA-specific adenosine deaminase-like protein 3; AltName: Full=tRNA-specific adenosine-34 deaminase subunit adat3 gi|22204386|emb|CAD43442.1| SI:dZ72B14.5 (novel protein) [Danio rerio] gi|55250228|gb|AAH85551.1| Si:dkey-204g5.2 [Danio rerio] Length = 336 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 42/172 (24%), Positives = 67/172 (38%), Gaps = 32/172 (18%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59 K +M A++ A++ VGAV V +II+ A + R HA ++ I Sbjct: 167 TKMREYMCVAVKAAKSGRELGMDAVGAVIVDPKTEQIIAVAHDCKRGSH-PLHHAVMVCI 225 Query: 60 RM----------------GCRILSQ------------EILPEVDLYVTLEPCTMCAAAIS 91 + CR I DLYVT EPC MCA A+ Sbjct: 226 DLVACGQDGGAYNYEKYPACRFSCSNSVCDGKETGLPYICTGYDLYVTREPCVMCAMALV 285 Query: 92 LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 +RI R++YGAS G + + + +H E++ G+ + ++ Sbjct: 286 HSRISRVFYGASTAD-GAFGSRYKIHCQKDLNHRFEVFKGVMVNACEDLCKE 336 >gi|291522092|emb|CBK80385.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Coprococcus catus GD/7] Length = 371 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 62/153 (40%), Gaps = 20/153 (13%) Query: 2 KKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ +M AL+ A+ VGAV V + ++I++ + HAE+ A Sbjct: 6 QEDLRYMQMALDMAKLGRGYTNPNPMVGAVIVKDGQVIAKGYHHCCGQG----HAEVEAF 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + + + +YVTLEPC CA I +I R+ GA +P G Sbjct: 62 KDA----GNQDVTGATIYVTLEPCSHYGKTPPCADKIIEKKIGRVVVGALDPNPLVAGRG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + + E+ G+ + S ++ + F K Sbjct: 118 IEKIR----NAGIEVTTGVLAEESIKLNEIFMK 146 >gi|126651196|ref|ZP_01723406.1| Guanine deaminase [Bacillus sp. B14905] gi|126592034|gb|EAZ86100.1| Guanine deaminase [Bacillus sp. B14905] Length = 152 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 14/147 (9%) Query: 7 FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++ A+++ ++ +N P GA V ++II+ GN D+TAHAEI+AIR + Sbjct: 3 YIQLAVDKTKDGIDQNIGGPFGATIVRGDEIIAVVGNTMMRDTDITAHAEIVAIREASKK 62 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL------ 119 L L + +Y T EPC MC +AI + I+ ++Y + Sbjct: 63 LGTMDLSDCVIYATCEPCPMCVSAIIWSGIKEVHYCNTAEDAHVHGFSDMHIRDYLTGKD 122 Query: 120 -ATCH-HSPEIYPGISEQRSRQIIQDF 144 + + H E P + + F Sbjct: 123 KSVLNMHKME-TP----EECDALFHHF 144 >gi|327479375|gb|AEA82685.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri DSM 4166] Length = 366 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 59/155 (38%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + +M+ AL+ A+ VG V V + +++ + HAE+ A Sbjct: 1 MTTDHAWMARALQLARKGLYSTHPNPRVGCVIVADGELVGEGWHVRAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R E YVTLEPC CA A+ A + R+ +P N Sbjct: 57 LRQAG-----ERARGATAYVTLEPCSHYGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGN 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G + A E+ G+ E +R++ F K Sbjct: 112 GLERLRSAG----IEVASGVLEGEARELNAGFTKR 142 >gi|162461371|ref|NP_001105964.1| cytidine deaminase2 [Zea mays] gi|119394647|gb|ABL74485.1| putative cytidine deaminase [Zea mays] gi|119394649|gb|ABL74486.1| putative cytidine deaminase [Zea mays] Length = 186 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F++ A+EEA + P GAV V N++++ N + D TAHAE+ AIR Sbjct: 29 DRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVCNDEVVVSCHNMVLKHTDPTAHAEVTAIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L + L + ++Y + EPC MC A+ L+RI+RL YGA I Sbjct: 89 EACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140 >gi|291484757|dbj|BAI85832.1| riboflavin-specific deaminase [Bacillus subtilis subsp. natto BEST195] Length = 361 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 59/148 (39%), Gaps = 21/148 (14%) Query: 5 NVFMSCALEEAQNAALRNE-IP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL+ A+ + E P VGAV V + +I+ + AHAE+ AI M Sbjct: 3 EYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGE----AHAEVHAIHMA 58 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 D+YVTLEPC CA I + I+R++ +P G Sbjct: 59 GAHA-----EGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVAGRGISM 113 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ GI ++ + + F Sbjct: 114 IKEAG----IEVREGILADQAESLNEKF 137 >gi|302521124|ref|ZP_07273466.1| cytidine/deoxycytidine deaminase [Streptomyces sp. SPB78] gi|302430019|gb|EFL01835.1| cytidine/deoxycytidine deaminase [Streptomyces sp. SPB78] Length = 151 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 13/144 (9%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ ++ A+EEA+ +P+GA + ++ R NR + D ++H E A R Sbjct: 5 EQAQEWLRPAIEEARQGLAEGGVPIGAALYGADGTLLGRGHNRRVQDADPSSHGETDAFR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + + TL PC C+ I I R+ G S GG + Sbjct: 65 KAGRQRT---YRGTTMVTTLSPCWYCSGLIKQFGITRVVIGESTTFKGG----EDWLEEQ 117 Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144 EI +++ ++ +F Sbjct: 118 G----VEIIR-LTDPECVDLMTEF 136 >gi|237739215|ref|ZP_04569696.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium sp. 2_1_31] gi|229423815|gb|EEO38862.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium sp. 2_1_31] Length = 369 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 27/158 (17%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHA 54 M K FM+ A+E A + P VGAV V + KII ++ HA Sbjct: 1 MDKTVDKKFMARAIELAFRGL--GGVNPNPLVGAVVVKDGKIIGEGWHKKYGG----PHA 54 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108 E+ A+ E +YVTLEPC CA I A I+R +P Sbjct: 55 EVWALNEAG-----EEAKGATIYVTLEPCSHQGKTPPCAKRIVEAGIKRCVIACIDPNPL 109 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A ++ GI E+ ++++ + F K Sbjct: 110 VAGKGIKIIEDAG----IKVDLGILEKEAKEVNKVFLK 143 >gi|83754218|pdb|2B3Z|A Chain A, Crystal Structure Of A Bifunctional Deaminase And Reductase Involved In Riboflavin Biosynthesis gi|83754219|pdb|2B3Z|B Chain B, Crystal Structure Of A Bifunctional Deaminase And Reductase Involved In Riboflavin Biosynthesis gi|83754220|pdb|2B3Z|C Chain C, Crystal Structure Of A Bifunctional Deaminase And Reductase Involved In Riboflavin Biosynthesis gi|83754221|pdb|2B3Z|D Chain D, Crystal Structure Of A Bifunctional Deaminase And Reductase Involved In Riboflavin Biosynthesis gi|83754933|pdb|2D5N|A Chain A, Crystal Structure Of A Bifunctional Deaminase And Reductase Involved In Riboflavin Biosynthesis gi|83754934|pdb|2D5N|B Chain B, Crystal Structure Of A Bifunctional Deaminase And Reductase Involved In Riboflavin Biosynthesis gi|83754935|pdb|2D5N|C Chain C, Crystal Structure Of A Bifunctional Deaminase And Reductase Involved In Riboflavin Biosynthesis gi|83754936|pdb|2D5N|D Chain D, Crystal Structure Of A Bifunctional Deaminase And Reductase Involved In Riboflavin Biosynthesis gi|211939446|pdb|3EX8|A Chain A, Complex Structure Of Bacillus Subtilis Ribg Reduction Mechanism In Riboflavin Biosynthesis gi|211939447|pdb|3EX8|B Chain B, Complex Structure Of Bacillus Subtilis Ribg Reduction Mechanism In Riboflavin Biosynthesis gi|211939448|pdb|3EX8|C Chain C, Complex Structure Of Bacillus Subtilis Ribg Reduction Mechanism In Riboflavin Biosynthesis gi|211939449|pdb|3EX8|D Chain D, Complex Structure Of Bacillus Subtilis Ribg Reduction Mechanism In Riboflavin Biosynthesis Length = 373 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 21/148 (14%) Query: 5 NVFMSCALEEAQNAALRNE-IP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL+ A+ + E P VGAV V + +I+ + AHAE+ AI M Sbjct: 15 EYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGE----AHAEVHAIHMA 70 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 D+YVTLEPC CA I + I+R++ +P G Sbjct: 71 GAHA-----EGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVAGRGISM 125 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ GI ++ ++ + F Sbjct: 126 MKEAG----IEVREGILADQAERLNEKF 149 >gi|16079385|ref|NP_390209.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus subtilis subsp. subtilis str. 168] gi|221310245|ref|ZP_03592092.1| riboflavin-specific deaminase [Bacillus subtilis subsp. subtilis str. 168] gi|221314569|ref|ZP_03596374.1| riboflavin-specific deaminase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319491|ref|ZP_03600785.1| riboflavin-specific deaminase [Bacillus subtilis subsp. subtilis str. JH642] gi|221323767|ref|ZP_03605061.1| riboflavin-specific deaminase [Bacillus subtilis subsp. subtilis str. SMY] gi|132565|sp|P17618|RIBD_BACSU RecName: Full=Riboflavin biosynthesis protein RibD; Includes: RecName: Full=Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase; Includes: RecName: Full=5-amino-6-(5-phosphoribosylamino)uracil reductase; AltName: Full=HTP reductase gi|40085|emb|CAA35878.1| unnamed protein product [Bacillus subtilis] gi|410125|gb|AAA67481.1| ribG [Bacillus subtilis subsp. subtilis str. 168] gi|2634763|emb|CAB14260.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus subtilis subsp. subtilis str. 168] gi|34873545|gb|AAQ83285.1| RibG [Cloning vector pRFN4] Length = 361 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 21/148 (14%) Query: 5 NVFMSCALEEAQNAALRNE-IP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL+ A+ + E P VGAV V + +I+ + AHAE+ AI M Sbjct: 3 EYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGE----AHAEVHAIHMA 58 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 D+YVTLEPC CA I + I+R++ +P G Sbjct: 59 GAHA-----EGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVAGRGISM 113 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ GI ++ ++ + F Sbjct: 114 MKEAG----IEVREGILADQAERLNEKF 137 >gi|219668833|ref|YP_002459268.1| riboflavin biosynthesis protein RibD [Desulfitobacterium hafniense DCB-2] gi|219539093|gb|ACL20832.1| riboflavin biosynthesis protein RibD [Desulfitobacterium hafniense DCB-2] Length = 365 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 44/155 (28%), Positives = 64/155 (41%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ N +MS ALE A A R P VG V V + I+ ++ K T HAE+ A Sbjct: 1 MELDNHYMSRALELAALAMGRTSPNPLVGCVIVKDGAIVGEGYHQ----KAGTPHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++ E YVTLEPC CA A+ A I+R+ +P Sbjct: 57 LQAAG-----EHARGATAYVTLEPCSHFGKTPPCADALIKAGIQRVVVAMVDPNPLVGGQ 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G A ++ G+ E+ +R + + F K Sbjct: 112 GITRLRAAG----IQVDVGLKEKEARTLNKGFLKA 142 >gi|311899518|dbj|BAJ31926.1| putative cytosine deaminase [Kitasatospora setae KM-6054] Length = 153 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 52/150 (34%), Gaps = 25/150 (16%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ ++ AL EA+ IP+GA + +++ R NR + D + HAE A R Sbjct: 8 EQARAWLDVALAEAETGLAEGGIPIGAALFRRDGELLGRGHNRRVQDGDPSMHAETSAFR 67 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG------IENGT 114 R+ + + TL PC C+ + I + G S GG G Sbjct: 68 AAGRLRG---YRDTVMVTTLSPCWYCSGLVRQFGIGHVVIGESTTFTGGHDWLATHGTGI 124 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 +++ DF Sbjct: 125 TLLDDPR---------------CVRLMTDF 139 >gi|115471365|ref|NP_001059281.1| Os07g0245100 [Oryza sativa Japonica Group] gi|113610817|dbj|BAF21195.1| Os07g0245100 [Oryza sativa Japonica Group] Length = 186 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F++ A+EEA + P GAV V N++++ N + D TAHAE+ AIR Sbjct: 29 DRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L + L + ++Y + EPC MC A+ L+RI+RL YGA I Sbjct: 89 EACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140 >gi|51246206|ref|YP_066090.1| cytosine deaminase [Desulfotalea psychrophila LSv54] gi|50877243|emb|CAG37083.1| probable cytosine deaminase [Desulfotalea psychrophila LSv54] Length = 145 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 1/104 (0%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F + A+ EA+ IP+G+V V++ +I+ R N+ + V HAE+ + R Sbjct: 2 DKFFAVAVAEARKGMATGGIPIGSVLVIDGQIVGRGHNQRVQRGSVVLHAEMDCLENAGR 61 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 I + + LY TL PC MC+ A+ L I R+ G + G Sbjct: 62 IKAADY-RRATLYSTLSPCDMCSGAVLLYGIPRVVIGENRTFCG 104 >gi|218232159|ref|YP_002368101.1| riboflavin biosynthesis protein RibD [Bacillus cereus B4264] gi|218160116|gb|ACK60108.1| riboflavin biosynthesis protein RibD [Bacillus cereus B4264] Length = 367 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 23/153 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M + ++M ALE A A P VG+V V +N+I+ + +HAEI Sbjct: 1 MLEHELYMKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGE----SHAEIH 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 AIRM E +YVTLEPC+ CA AI A I+++ +P Sbjct: 56 AIRMAG-----EQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSG 110 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ E+ S+++ + F Sbjct: 111 RGIKILQDAG----IEVLVGVCEEESKKMNEVF 139 >gi|218778327|ref|YP_002429645.1| CMP/dCMP deaminase zinc-binding [Desulfatibacillum alkenivorans AK-01] gi|218759711|gb|ACL02177.1| CMP/dCMP deaminase zinc-binding [Desulfatibacillum alkenivorans AK-01] Length = 169 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 8/150 (5%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA---HAEILAI 59 FM+ ALE A+ A E PVG + V + ++I++ R T HAE++A+ Sbjct: 2 DHMQFMNKALELARQALEAGEFPVGCILVHDGRVIAQGA-RVGVAGGGTGELEHAEMVAM 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + + EV +Y T+EPC MC A+ + I ++ Y + GGG TL Sbjct: 61 ARFENMENAPPPSEVTIYCTMEPCLMCFGALMIHGITKIVYAYEDAMGGG--TALDRSTL 118 Query: 120 ATCHHS--PEIYPGISEQRSRQIIQDFFKE 147 + EI P + +S + + FF Sbjct: 119 PPLYRDAEVEITPHVGRSQSLALFKAFFSR 148 >gi|323965096|gb|EGB60555.1| riboflavin biosynthesis protein RibD [Escherichia coli M863] gi|327254735|gb|EGE66351.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_7v] Length = 367 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|291518541|emb|CBK73762.1| riboflavin biosynthesis protein RibD [Butyrivibrio fibrisolvens 16/4] Length = 257 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 18/150 (12%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M ALE A+ A N P VGAV V + II + HAE A++ Sbjct: 2 EDKTYMLRALELAKLGAGFVNPNPMVGAVIVKDGVIIGEGYHEKYGQL----HAERNALK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR + +YVTLEPC C AI +RI R+ G + G Sbjct: 58 D-CRERGNDP-AGATMYVTLEPCCHYGKTPPCTEAIVESRINRVVIGTLDVNPVVAGKGA 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 H + G+ E+ +++ + F Sbjct: 116 DILRE----HGIRVEVGLLEKECKKLNRVF 141 >gi|300718994|ref|YP_003743797.1| Cytidine/deoxycytidylate deaminase [Erwinia billingiae Eb661] gi|299064830|emb|CAX61950.1| Cytidine/deoxycytidylate deaminase [Erwinia billingiae Eb661] Length = 157 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 48/94 (51%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ +E A P V V N +I++ + N+ + D TAHAEILAIR C+ L Sbjct: 3 FVKRTIELAMQNVEEGGRPFATVIVRNGEIVAESANKAAQSHDPTAHAEILAIREACKKL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E L + ++Y+ PC MC ++ +++ Y Sbjct: 63 QTENLSDCEIYILASPCPMCLGSLYYCSPKQVIY 96 >gi|189219256|ref|YP_001939897.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4] gi|189186114|gb|ACD83299.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4] Length = 146 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 10/142 (7%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F A EEA+ IP+GA ++++ R NR +L V H E+ + R Sbjct: 2 DPFWHIAFEEAKIGFEEGGIPIGACLAYKDRVLGRGRNRRVQLGSVIKHGELDCLENA-R 60 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + +I E LY TL PC MC+ AI L I+++ G + G E Q + Sbjct: 61 RYTAKIYREAILYTTLSPCWMCSGAILLYGIKKVVIGENRNFKGPEEILIQ--------N 112 Query: 125 SPEIYPGISEQRSRQIIQDFFK 146 EI + ++ +++ F Sbjct: 113 GVEII-HLDDEECTRLLSSFIA 133 >gi|149179738|ref|ZP_01858243.1| riboflavin biosynthesis protein RibD [Bacillus sp. SG-1] gi|148851930|gb|EDL66075.1| riboflavin biosynthesis protein RibD [Bacillus sp. SG-1] Length = 363 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 22/153 (14%) Query: 1 MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ +M AL A+ VGAV V + +I+ + + D HAE+ A Sbjct: 1 MQEQE-YMKLALSLAKAGKGQTAPNPAVGAVVVKDGEIVGMGAHL--KAGDP--HAEVHA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IR D+YVTLEPC CA I +++R++ + +P Sbjct: 56 IRQAGSKA-----EGADIYVTLEPCAHTGKTPPCANLIVENKLKRVFIASVDPNPLVAGK 110 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G A E+ GI E+ + ++ FF Sbjct: 111 GIDILERAG----IEVVTGICEKEALELNAHFF 139 >gi|303249744|ref|ZP_07335948.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251932|ref|ZP_07533833.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302651311|gb|EFL81463.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860624|gb|EFM92636.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 364 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+ A+ N P VG V V N +I++ + HAE A+ Sbjct: 2 TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAV- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +E L YVTLEPC C+ + I++++ G+S+P G Sbjct: 57 ----LHCKEDLSGATAYVTLEPCCHHGRTPPCSNLLIERGIKKVFIGSSDPNPLVAGRGA 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ ++ + FF Sbjct: 113 NQLRQAG----VEVVEGLLKEECDALNPIFF 139 >gi|307249603|ref|ZP_07531590.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858458|gb|EFM90527.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 364 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+ A+ N P VG V V N +I++ + HAE A+ Sbjct: 2 TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAV- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +E L YVTLEPC C+ + I++++ G+S+P G Sbjct: 57 ----LHCKEDLSGATAYVTLEPCCHHGRTPPCSNLLIERGIKKVFIGSSDPNPLVAGRGA 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ ++ + FF Sbjct: 113 NQLRQAG----VEVVEGLLKEECDALNPIFF 139 >gi|237749273|ref|ZP_04579753.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Oxalobacter formigenes OXCC13] gi|229380635|gb|EEO30726.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Oxalobacter formigenes OXCC13] Length = 363 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 59/152 (38%), Gaps = 18/152 (11%) Query: 1 MKKGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M FM ALE A+ + L + P VG V V + +II + HAE+ A Sbjct: 1 MADHEKFMRRALELARKCSVLTSPNPRVGCVIVRDGEIIGEGFTQPVGGN----HAEVEA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + +YVTLEPC CA A+ A ++R+ +P Sbjct: 57 LNDVAKRGQDCR--GATVYVTLEPCSHRGRTPPCADALIRANVKRVVAAIEDPNVQVAGK 114 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A E+ G+ +R++ + F Sbjct: 115 GLAKLKAAG----IEVLCGVLPDEARELNRGF 142 >gi|323976105|gb|EGB71198.1| riboflavin biosynthesis protein RibD [Escherichia coli TW10509] Length = 367 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|289577285|ref|YP_003475912.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter italicus Ab9] gi|289526998|gb|ADD01350.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter italicus Ab9] Length = 360 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 21/150 (14%) Query: 5 NVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ N P VGAV V N KII + HAE+ A++ Sbjct: 2 EEYMKRALTLAEKGWGYTNPNPLVGAVIVKNGKIIGEGYHEYFGG----PHAEVNALKNA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 E + ++VTLEPC C I + I+++Y +P NG + Sbjct: 58 V-----EDVKGSTMFVTLEPCSHYGKTPPCVEEIIKSGIKKVYIAMEDPNPKVSGNGIKR 112 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E++ G+ E+ +R++ + FFK Sbjct: 113 LKEAG----IEVHVGMMEKEARKLNEIFFK 138 >gi|163803478|ref|ZP_02197350.1| hypothetical protein 1103602000439_AND4_19771 [Vibrio sp. AND4] gi|159172738|gb|EDP57587.1| hypothetical protein AND4_19771 [Vibrio sp. AND4] Length = 375 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 57/153 (37%), Gaps = 21/153 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + MS AL+ A+ P VG V V + +I+ + HAE+ A+ Sbjct: 13 SQDFEMMSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGE----PHAEVHAM 68 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 RM YVTLEPC CA + A++ R+ +P G Sbjct: 69 RMAGDKTQ-----GATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCATEDPNPKVAGRG 123 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q A ++ G+ + + ++ + F K Sbjct: 124 FQMLRDAG----VDVQVGLLQSEAIELNKGFIK 152 >gi|125624336|ref|YP_001032819.1| riboflavin biosynthesis protein RibD [Lactococcus lactis subsp. cremoris MG1363] gi|44662840|gb|AAS47500.1| riboflavin-specific deaminase/reductase [Lactococcus lactis subsp. cremoris NZ9000] gi|124493144|emb|CAL98108.1| riboflavin biosynthesis protein RibD [Lactococcus lactis subsp. cremoris MG1363] gi|300071120|gb|ADJ60520.1| riboflavin biosynthesis protein RibD [Lactococcus lactis subsp. cremoris NZ9000] Length = 362 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 25/155 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M+ FM+ A+ A+ + P VGA+ V + +II + + AHAEI Sbjct: 1 MENDEHFMNLAILLARKGG--GNVNPNPQVGAIIVNDGRIIGQGYHEKYGE----AHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A E +YVTLEPC C AI +++R+ G+ +P Sbjct: 55 NAF-----KSCIESPEGSTIYVTLEPCAHQGKQPPCFEAIIKNKVKRVVIGSLDPNPLVA 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A ++ + E+ + + + FF Sbjct: 110 GKGIEAMKKAG----IDVSLKVLEKECKDLNKIFF 140 >gi|110669248|ref|YP_659059.1| cytosine/adenosine deaminases [Haloquadratum walsbyi DSM 16790] gi|109626995|emb|CAJ53471.1| cytosine/adenosine deaminases [Haloquadratum walsbyi DSM 16790] Length = 154 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 1/143 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + M AL+ A+ +A R + P G+V V ++ ++ R N D+ H E+ Sbjct: 10 DHEMHMQEALKLARESAARGDEPFGSVLVRDDTVVMRESNHEITESDIRRHPELHLAYRA 69 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA-SNPKGGGIENGTQFYTLAT 121 C+ + E+ +Y T EPC MCA + A Y S+ N + Sbjct: 70 CQAYDSDERAEMVMYTTTEPCPMCAGGMVTAGFDSTVYSVGSDEIAEFTGNEPSVRSANI 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDF 144 EI + RQ+ +++ Sbjct: 130 LDGITEITGPLLNDEGRQVHEEY 152 >gi|162461226|ref|NP_001105963.1| cytidine deaminase1 [Zea mays] gi|119394643|gb|ABL74483.1| putative cytidine deaminase [Zea mays] gi|119394645|gb|ABL74484.1| putative cytidine deaminase [Zea mays] gi|195654311|gb|ACG46623.1| cytidine/deoxycytidylate deaminase family protein [Zea mays] Length = 186 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F++ A+EEA + P GAV V N++++ N + D TAHAE+ AIR Sbjct: 29 DRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L + L + ++Y + EPC MC A+ L+RI+RL YGA I Sbjct: 89 EACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140 >gi|302559168|ref|ZP_07311510.1| cytosine deaminase [Streptomyces griseoflavus Tu4000] gi|302476786|gb|EFL39879.1| cytosine deaminase [Streptomyces griseoflavus Tu4000] Length = 152 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 36/145 (24%), Positives = 56/145 (38%), Gaps = 15/145 (10%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +++ AL EA+ IP+GA + ++ R NR + D +AHAE A R R Sbjct: 11 AWLATALAEARAGGDEGGIPIGAALYGADGTLLGRGHNRRVQDGDPSAHAETAAFRAAGR 70 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 S + TL PC C+ + I R+ G + GG H Sbjct: 71 QRS---YGGTTMVTTLSPCWYCSGLVRQFGISRVVIGEAATFHGG--------HDWLAAH 119 Query: 125 SPEIYPGISEQ-RSRQIIQDFFKER 148 EI + + +++DF R Sbjct: 120 GVEIV--LLDDPECGAMMRDFVARR 142 >gi|254580711|ref|XP_002496341.1| ZYRO0C16148p [Zygosaccharomyces rouxii] gi|238939232|emb|CAR27408.1| ZYRO0C16148p [Zygosaccharomyces rouxii] Length = 155 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 15/154 (9%) Query: 1 MKKGNVF----MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHA 54 M + + M A EEA N +P+G + + +++ R N + T H Sbjct: 1 MDSASRWDGLGMDIAYEEALIGYKENGVPIGGCLIDSRDGRVLGRGHNLRYQKNSATLHG 60 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 EI + C L + +Y TL PC MC AI + I R G + ++ Sbjct: 61 EISTLEN-CGRLPASVYRHATMYTTLSPCDMCTGAIVMYGIPRCVIGEHDN----FKSPG 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + Y + H + + ++R + +++ F ER Sbjct: 116 EVYLESR-GHQVVV---VDDKRCKDLMKKFILER 145 >gi|227818281|ref|YP_002822252.1| cytidine/deoxycytidylate deaminase family protein [Sinorhizobium fredii NGR234] gi|227337280|gb|ACP21499.1| cytidine/deoxycytidylate deaminase family protein [Sinorhizobium fredii NGR234] Length = 164 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 61/156 (39%), Gaps = 11/156 (7%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNR-NRELKDVTAHAEILAIRM 61 + A + A+ + + P G++ + ++ N + E D TAHAE L Sbjct: 9 DESLLRKAFDVARRSREGGDHPFGSILADRDGNVLLEQCNGYSSEGGDRTAHAERLLATR 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS---------NPKGGGIEN 112 + + L E +Y + EPC MC+ AI A I R+ +G S + K + Sbjct: 69 AGKSYDLDFLAECTMYTSAEPCAMCSGAIYWAGIGRVVFGLSEREMKQQIGDSKENPTLD 128 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 A E+ + + ++ ++++ R Sbjct: 129 LPCDIVFAAGQRPTEVVGPMLADEAAKLHKEYWSRR 164 >gi|299531573|ref|ZP_07044979.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni S44] gi|298720536|gb|EFI61487.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni S44] Length = 162 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 31/83 (37%), Positives = 51/83 (61%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + ++++RA N+ EL D +AHAE+ A+R+G + L +Y + PC+ Sbjct: 31 PFGAVLVRDGQVLARAVNQVDELCDPSAHAEMQALRIGAKAQGSTDLSGAVMYASGYPCS 90 Query: 85 MCAAAISLARIRRLYYGASNPKG 107 MC A+ LA ++++Y+ SN G Sbjct: 91 MCYTAMLLAGVKQVYFAYSNEDG 113 >gi|301054889|ref|YP_003793100.1| riboflavin biosynthesis protein ribD [Bacillus anthracis CI] gi|300377058|gb|ADK05962.1| riboflavin biosynthesis protein ribD [Bacillus cereus biovar anthracis str. CI] Length = 367 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 23/153 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M + ++M ALE A A P VG+V V +N+I+ + HAEI Sbjct: 1 MLEHELYMKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGE----PHAEIH 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 AIRM E +YVTLEPC+ CA AI A I+++ +P Sbjct: 56 AIRMAG-----EQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSG 110 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ E+ S+++ + F Sbjct: 111 RGIKILQDAG----IEVLVGVCEEESKKMNEVF 139 >gi|149564876|ref|XP_001516821.1| PREDICTED: similar to hCG22695 [Ornithorhynchus anatinus] Length = 373 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 67/184 (36%), Gaps = 48/184 (26%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR 60 K +M A+ A+ A + VGAV V +++ + HA ++ I Sbjct: 178 KMQTYMEKAIHTARQGAEKGMKAVGAVVVDPATEDVLAVGH-DCSSASNPLLHATMVCID 236 Query: 61 MGCRILSQ--------------------------------------------EILPEVDL 76 + + + I DL Sbjct: 237 LVAQRQGRGAYSFNAFPACTISPSGDRAIPSASKSIQPGVMRKFESRRDGLPYICTGYDL 296 Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136 YVT EPC MCA A+ +RI+R++YGAS+P G + + ++ +H E++ GI E Sbjct: 297 YVTSEPCVMCAMALLHSRIQRVFYGASSPD-GALGTRYKIHSKEDLNHHFEVFRGILETE 355 Query: 137 SRQI 140 + Sbjct: 356 CCSL 359 >gi|187932958|ref|YP_001885493.1| riboflavin biosynthesis protein RibD [Clostridium botulinum B str. Eklund 17B] gi|187721111|gb|ACD22332.1| riboflavin biosynthesis protein RibD [Clostridium botulinum B str. Eklund 17B] Length = 378 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 21/151 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M ALE A+ N P VGAV V +N+II + AHAE+ AI Sbjct: 17 NEEYMDLALELAKKGIGKVNPNPLVGAVIVKDNEIIGTGYHEYYGG----AHAEVDAINN 72 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + + L +Y+TLEPC C I +I+++ G +P + Sbjct: 73 -----TTKSLEGSTIYITLEPCAHYGKTPPCVNLIIEKKIKKVVIGMLDPNPMVSGKSVK 127 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 E+ G+ E++ +++ + F K Sbjct: 128 KLKEND----IEVIVGVEEEKCKKLNESFIK 154 >gi|119394651|gb|ABL74487.1| putative cytidine deaminase [Zea mays] gi|119394653|gb|ABL74488.1| putative cytidine deaminase [Zea mays] Length = 186 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F++ A+EEA + P GAV V N++++ N + D TAHAE+ AIR Sbjct: 29 DRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVCNDEVVVSCHNMVLKHTDPTAHAEVTAIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L + L + ++Y + EPC MC A+ L+RI+RL YGA I Sbjct: 89 EACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140 >gi|253576364|ref|ZP_04853694.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. oral taxon 786 str. D14] gi|251844257|gb|EES72275.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. oral taxon 786 str. D14] Length = 373 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 23/156 (14%) Query: 1 MK--KGNVFMSCALEEAQNA-ALRNEIPV-GAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 MK +M+ AL+ A+ A PV GAV V + ++ + LK T HAE+ Sbjct: 1 MKVIDDEYYMALALDMAERAQGQTGTNPVVGAVVVKDGALVGLGTH----LKRGTPHAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+ M +YVTLEPC CA + +++R+ +P Sbjct: 57 HALNMAGSQA-----EGSTVYVTLEPCSHHGLTPPCAERLIHEKVQRVVVACEDPNPLVA 111 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A E+ G+ +R+ ++ + F K Sbjct: 112 GKGIELLRAAG----IEVEVGVLRERALKLNRRFIK 143 >gi|311068845|ref|YP_003973768.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus atrophaeus 1942] gi|310869362|gb|ADP32837.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus atrophaeus 1942] Length = 363 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 21/148 (14%) Query: 5 NVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ ALE A+ P VGAV V N +I+ + AHAE+ AI+M Sbjct: 3 EYYMNTALELAKQGEGQTGSNPLVGAVVVKNGEIVGMGAHLKYGE----AHAEVHAIKMA 58 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + + + D+YVTLEPC CA I + I+R++ +P G Sbjct: 59 GK-----HVKDADIYVTLEPCSHYGKTPPCAELIITSGIKRVFVAMRDPNPLVAGKGISM 113 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ GI ++ ++ + F Sbjct: 114 IKAAG----IEVKEGILTDQAEKLNEKF 137 >gi|221064913|ref|ZP_03541018.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] gi|220709936|gb|EED65304.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] Length = 166 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 14/147 (9%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 ++ A+ A A R P GA+ V + +++++A N N E D TAHAE+ AIR+ Sbjct: 13 DGRYLREAIALADTARERGNRPFGALIVAADGRVLAQASNANGESGDCTAHAELSAIRLA 72 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG-----------GGIE 111 + S+ L LY + EPC MCA AI + I R+ YG + Sbjct: 73 SPLHSRNELAVATLYSSAEPCVMCAGAIFWSAIGRVVYGIDAERLRVFRGERLDQKDAEL 132 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSR 138 + + A+ H+ E + + Sbjct: 133 SCRDVFQAAS--HAIECIGPALIEEAS 157 >gi|268611447|ref|ZP_06145174.1| riboflavin biosynthesis protein [Ruminococcus flavefaciens FD-1] Length = 373 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 56/151 (37%), Gaps = 18/151 (11%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M ALE AQ VGAV V + KII ++ HAE A Sbjct: 2 QHEDYMRRALELAQRGMGFTSPNPMVGAVIVRDGKIIGEGWHKKYGEL----HAERTAF- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + D+YVTLEPC C A+ I+R++ G+++P G Sbjct: 57 -AYCDENGIDCTGADMYVTLEPCCHHGKQPPCTDAVIEHGIKRVFIGSADPNPMVSGKGV 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + H E+ + + I FF Sbjct: 116 KILRE----HGIEVTEDVLREECDAINGIFF 142 >gi|118580019|ref|YP_901269.1| riboflavin biosynthesis protein RibD [Pelobacter propionicus DSM 2379] gi|118502729|gb|ABK99211.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pelobacter propionicus DSM 2379] Length = 367 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M M AL A+ + VG V V + I+ +R K T+HAEI A Sbjct: 1 MTDDIRQMKRALALARRGIGKTSPNPAVGCVIVKDGVIVGTGWHR----KAGTSHAEIHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + M E D++VTLEPC C+ A+ A +RR+ G S+P Sbjct: 57 LEMAG-----ESARGADVFVTLEPCCHTGKTPPCSQALIRAGVRRVVAGMSDPNPRVSGG 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G A ++ G+ E+ R + + F K+ Sbjct: 112 GLAELETAG----IQVVCGVLEKECRDLNRPFIKQ 142 >gi|317131626|ref|YP_004090940.1| riboflavin biosynthesis protein RibD [Ethanoligenens harbinense YUAN-3] gi|315469605|gb|ADU26209.1| riboflavin biosynthesis protein RibD [Ethanoligenens harbinense YUAN-3] Length = 367 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 41/155 (26%), Positives = 56/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M ALE A+ N P VGAV V + ++I +R HAE A+ Sbjct: 2 SDETYMKLALEYAEKGCGWVNPNPMVGAVVVKDGRVIGTGWHRRYGEL----HAERNAL- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E LYVTLEPC C AI + I R+ G+ +P G Sbjct: 57 ----ASCTEPPQGATLYVTLEPCCHYGKTPPCTDAILESGIHRVVVGSVDPNPLVAGKGI 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + E+ G+ I + FF R Sbjct: 113 RILRQRG----IEVAEGVLGDACTGINEVFFHFIR 143 >gi|307245212|ref|ZP_07527303.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254158|ref|ZP_07536003.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258621|ref|ZP_07540356.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853856|gb|EFM86070.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862858|gb|EFM94807.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867278|gb|EFM99131.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 361 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+ A+ N P VG V V N +I++ + HAE AI Sbjct: 2 TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAI- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +E L YVTLEPC C+ + I++++ G+S+P G Sbjct: 57 ----LHCKEDLFGATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGA 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ ++ + FF Sbjct: 113 GQLRQAG----VEVVEGLLKEECDALNPIFF 139 >gi|170756114|ref|YP_001782503.1| riboflavin biosynthesis protein RibD [Clostridium botulinum B1 str. Okra] gi|169121326|gb|ACA45162.1| riboflavin biosynthesis protein RibD [Clostridium botulinum B1 str. Okra] Length = 365 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 61/156 (39%), Gaps = 25/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M+ N M AL+ A+ ++ P VGA+ V NNKII ++ HAE+ Sbjct: 1 MEDYNFHMEKALKLAERG--EGKVNPNPKVGAIVVKNNKIIGEGYHKYFGG----PHAEV 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+R +YVTLEPC CA +I I + +P Sbjct: 55 YALREAGEKA-----KGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVE 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G E+ GI E+ S+++ + F K Sbjct: 110 GRGIDILKQNG----IEVVTGIMEKESKKLNEVFIK 141 >gi|281210912|gb|EFA85078.1| cytidine deaminase-like protein [Polysphondylium pallidum PN500] Length = 499 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 70/182 (38%), Gaps = 44/182 (24%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRA-----GNRNRELKDVT------ 51 N FM A+E+A PVGAV V N I GN E+ + T Sbjct: 309 NTFMKKAIEQANIGKSLGFNPVGAVLVDPETNTIHGAGFDQTPGNHMNEITNTTTVKYHL 368 Query: 52 ----AHAEILAIRMGCRIL---------------------------SQEILPEVDLYVTL 80 +H + I + ++ LY+T Sbjct: 369 SPILSHCTMNLIHQLANQHIERCVQKSGTAGMPALASMQQTPNSEDDAYLATDLYLYITR 428 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MC+ A+ +RI+R+ +GA P GG+ + +T + +H ++Y GI E + + + Sbjct: 429 EPCIMCSMALVHSRIKRVIFGAVQPNAGGLGGCLKVHTQKSINHRFQVYHGILENQCKLL 488 Query: 141 IQ 142 + Sbjct: 489 FE 490 >gi|264677000|ref|YP_003276906.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] gi|262207512|gb|ACY31610.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] Length = 162 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 32/83 (38%), Positives = 51/83 (61%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V N ++++RA N+ EL D +AHAE+ A+R+G + L +Y + PC+ Sbjct: 31 PFGAVLVRNGQVLARAVNQVDELCDPSAHAEMQALRIGAKAQGSTDLSGAVMYASGYPCS 90 Query: 85 MCAAAISLARIRRLYYGASNPKG 107 MC A+ LA ++++Y+ SN G Sbjct: 91 MCYTAMLLAGVKQVYFAYSNEDG 113 >gi|219871320|ref|YP_002475695.1| riboflavin biosynthesis protein RibD [Haemophilus parasuis SH0165] gi|219691524|gb|ACL32747.1| riboflavin biosynthesis protein RibD [Haemophilus parasuis SH0165] Length = 363 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 59/151 (39%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++FM+ A+E A+ N P VG V V + KII+ ++ HAE AI Sbjct: 2 THSIFMARAIELAELGRGWTNPNPLVGCVIVKDGKIIAEGYHQRYGE----WHAERNAI- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + QE L YVTLEPC C+ + I+ + G+S+P G Sbjct: 57 ----LHCQEDLSGATAYVTLEPCCHHGWTPPCSDLLIERGIKTVVIGSSDPNPLVAGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ + + + FF Sbjct: 113 AQLRQAG----IEVIENVMKAECDALNPIFF 139 >gi|55379804|ref|YP_137654.1| cytosine deaminase [Haloarcula marismortui ATCC 43049] gi|55232529|gb|AAV47948.1| cytosine deaminase [Haloarcula marismortui ATCC 43049] Length = 154 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 1/143 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + A E A+ A R + P G+V V +N+++ A NR DV H E+ Sbjct: 10 DHETHIQRAFELARTAVDRGDRPFGSVLVRDNEVVMEASNRVLTESDVRRHPELQLAHRA 69 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA-SNPKGGGIENGTQFYTLAT 121 + + E +Y + EPC MCA + A + R+ Y S+ G + + Sbjct: 70 MQEFDPDERAETVMYTSTEPCPMCAGGLRYAGLGRVVYSVGSDEMGEFSGHEESVRSGEI 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDF 144 ++ I + I +DF Sbjct: 130 LAGITDVAGPICHEEGLAIHEDF 152 >gi|157159935|ref|YP_001457253.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli HS] gi|157065615|gb|ABV04870.1| riboflavin biosynthesis protein RibD [Escherichia coli HS] Length = 367 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|218199364|gb|EEC81791.1| hypothetical protein OsI_25504 [Oryza sativa Indica Group] gi|222636744|gb|EEE66876.1| hypothetical protein OsJ_23692 [Oryza sativa Japonica Group] Length = 186 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F++ A+EEA + P GAV V N++++ N + D TAHAE+ AIR Sbjct: 29 DRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L + L + ++Y + EPC MC A+ L+RI+RL YGA I Sbjct: 89 EACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140 >gi|302833465|ref|XP_002948296.1| hypothetical protein VOLCADRAFT_73641 [Volvox carteri f. nagariensis] gi|300266516|gb|EFJ50703.1| hypothetical protein VOLCADRAFT_73641 [Volvox carteri f. nagariensis] Length = 172 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 16/156 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M AL +A +A E+PVG V V + ++ R N + ++ T HAE++AI Sbjct: 1 MCQALAQAHDAWACREVPVGCVVVRDGDVVGRGHNLTNKTRNGTRHAEMIAIDQILAACG 60 Query: 68 ----QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA--- 120 DLYVT+EPC MCA A+SL R++++G N + GG + Sbjct: 61 GAVQDAAFERCDLYVTVEPCIMCAGALSLLGFRKVFFGCGNDRFGGCGSILPVNQEGCGP 120 Query: 121 ---------TCHHSPEIYPGISEQRSRQIIQDFFKE 147 G+ +++ +++++F+ Sbjct: 121 CARQASAGTHAGRGFPAQGGLFAEQAVELLREFYAA 156 >gi|157156281|ref|YP_001461596.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli E24377A] gi|157078311|gb|ABV18019.1| riboflavin biosynthesis protein RibD [Escherichia coli E24377A] Length = 367 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|88607630|ref|YP_504671.1| riboflavin biosynthesis protein RibD [Anaplasma phagocytophilum HZ] gi|88598693|gb|ABD44163.1| riboflavin biosynthesis protein RibD [Anaplasma phagocytophilum HZ] Length = 364 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 25/155 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M FM+ AL A+ + P VG V + + ++ R HAEI Sbjct: 1 MVPDERFMAMALTLARRGL--GNVYPNPAVGCVVIRDGVVVGRGW--TVAGGRP--HAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 +A++ +YVTLEPC C +A+ A + R+ G +P Sbjct: 55 VALQNAGN-----RAIGATVYVTLEPCCHDGVTGPCTSALINAGVSRVVIGVQDPDYRVS 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G A E+ G+ +Q++ + FF Sbjct: 110 GKGISSLEAAG----IEVKYGVLQQQAEALNAGFF 140 >gi|152976519|ref|YP_001376036.1| riboflavin biosynthesis protein RibD [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025271|gb|ABS23041.1| riboflavin biosynthesis protein RibD [Bacillus cytotoxicus NVH 391-98] Length = 370 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ AQ A + P VGAV V N KI+ + + HAE+ A+R Sbjct: 2 TDQEYMKIALQLAQSTAGQTSPNPMVGAVVVKNGKIVGMGAHLRAGEE----HAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + +++R+ + NG Sbjct: 58 MAGAHA-----KGATVYVTLEPCSHFGKTPPCCNLLIQKKVKRVVIATLDSNPLVAGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A + + GI E+ +R + + FF K +R Sbjct: 113 KKLEEAGIY----VTTGILEEEARSLNRYFFHYMKTKR 146 >gi|189485534|ref|YP_001956475.1| riboflavin biosynthesis protein RibD [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287493|dbj|BAG14014.1| riboflavin biosynthesis protein RibD [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 355 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 28/156 (17%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 GN +M AL+ AQ + + P VG V V +NKI+ R ++ HAE+ A Sbjct: 2 NGNKYMQLALDLAQKG--KGRVYTNPLVGCVIVKDNKIVGRGWHQCFGGN----HAEVNA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + DLYVTLEPC T C I A I+R+YY + + Sbjct: 56 IIDAGK-----NAEGADLYVTLEPCNSYGKRTPCTLTIIKAGIKRVYYAVPDSN---VSG 107 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 G + +++ G+ +++SR +I+D+ K Sbjct: 108 GREILERNN----IKVHEGLLKKQSRILIKDYLKHL 139 >gi|160872356|ref|ZP_02062488.1| cytosine deaminase (Cytosine aminohydrolase) [Rickettsiella grylli] gi|159121155|gb|EDP46493.1| cytosine deaminase (Cytosine aminohydrolase) [Rickettsiella grylli] Length = 169 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 9/146 (6%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 KK F+ A +EA IP+G++ V+ NK+ ++ N+ + + H E + Sbjct: 6 KKEREFLDLAYQEALLGLKEGGIPIGSILVVENKVRAKGRNKRIQEHSMIKHGETDCLEN 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R + E L LY TL PC+MCA AI L +I R+ G + + L Sbjct: 66 TRRKVLPEDLQRATLYTTLSPCSMCAGAILLHKIPRVIVGEN--------KTFEQSELWL 117 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147 + E+ +++++ ++ F ++ Sbjct: 118 KQNQTEVIV-VNQEKCIAMMLSFIRK 142 >gi|333025189|ref|ZP_08453253.1| putative cytidine/deoxycytidine deaminase [Streptomyces sp. Tu6071] gi|332745041|gb|EGJ75482.1| putative cytidine/deoxycytidine deaminase [Streptomyces sp. Tu6071] Length = 151 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 58/147 (39%), Gaps = 13/147 (8%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ ++ A+EEA+ +P+GA + ++ R NR + D ++H E A R Sbjct: 5 EQAQEWLRPAVEEARQGLAEGGVPIGAALYGADGTLLGRGHNRRVQDADPSSHGETDAFR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + + TL PC C+ I I R+ G S GG + Sbjct: 65 KAGRQRT---YRGTTMVTTLSPCWYCSGLIKQFGITRVVIGESTTFKGG----EDWLEEQ 117 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147 EI +++ ++ +F ++ Sbjct: 118 G----VEIIR-LTDPECVDLMTEFIEK 139 >gi|196248758|ref|ZP_03147458.1| riboflavin biosynthesis protein RibD [Geobacillus sp. G11MC16] gi|196211634|gb|EDY06393.1| riboflavin biosynthesis protein RibD [Geobacillus sp. G11MC16] Length = 366 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 59/153 (38%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M AL+ A+ + VGAV V + I+ + HAE+ A Sbjct: 1 MYNDEHYMRLALDVAKAGVGQTSPNPAVGAVVVNDGTIVGIGAHLKAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 IRM +YVTLEPC CA + A +RR+ ++P Sbjct: 57 IRMAGEKA-----RGATVYVTLEPCSHYGKTPPCADLLIEAGVRRVVVATTDPNPLVAGK 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G A ++ GI ++ + ++ + FF Sbjct: 112 GINKLRRAG----IDVEVGILKEEADELNRMFF 140 >gi|206562263|ref|YP_002233026.1| guanine deaminase [Burkholderia cenocepacia J2315] gi|198038303|emb|CAR54258.1| guanine deaminase [Burkholderia cenocepacia J2315] Length = 155 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 47/94 (50%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ ++ A P V V + +I++ + N + D TAHAEILA+R CR L Sbjct: 3 FVKRTIDLAMKNVEEGGRPFATVIVRDGEIVAESPNLVAQTSDPTAHAEILAVRDACRTL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E L + ++Y+ PC MC ++ +R+ Y Sbjct: 63 GTEHLTDCEIYILASPCPMCLGSLYYCSPKRVIY 96 >gi|145588458|ref|YP_001155055.1| riboflavin biosynthesis protein RibD [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046864|gb|ABP33491.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 371 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 18/152 (11%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M AL EAQ A L N P VG V V + ++I R + AHAEI AI Sbjct: 6 DHQWMGEALGEAQKALYLANPNPRVGCVIVKDGQVIGRGHTQRVGG----AHAEIQAI-- 59 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + + + +YVTLEPC C A+ +AR ++ +P G Sbjct: 60 ADAKANGKDIAGSTIYVTLEPCSHTGRTPPCVNALVVARPAKVIVSMLDPNPLVSGGGLA 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 T A E+ G+ E ++ I + F Sbjct: 120 RLTDAG----IEVQCGLLESEAQAINRGFISR 147 >gi|331676081|ref|ZP_08376793.1| riboflavin biosynthesis protein RibD [Escherichia coli H591] gi|331076139|gb|EGI47421.1| riboflavin biosynthesis protein RibD [Escherichia coli H591] Length = 367 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|307256427|ref|ZP_07538209.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865057|gb|EFM96958.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 364 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+ A+ N P VG V V N +I++ + HAE A+ Sbjct: 2 TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAV- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +E L YVTLEPC C+ + I++++ G+S+P G Sbjct: 57 ----LHCKEDLSGATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGA 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ ++ + FF Sbjct: 113 GQLRQAG----VEVVEGLLKEECDALNPIFF 139 >gi|299529821|ref|ZP_07043254.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni S44] gi|298722235|gb|EFI63159.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni S44] Length = 146 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 7/136 (5%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A++ A L+ P GAV N++++ N D + HAE+ AIR G + + Sbjct: 1 MRLAVDLAHANRLQGGRPFGAVLAQGNEVVATGVNEIIVSHDPSTHAEMQAIRAGTQKRA 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN----PKGGGIENGTQFYTL---A 120 L + +Y + PC MC AA+ + ++++ N P G E+ Q L Sbjct: 61 NPSLAGLSIYASGHPCPMCLAALVMNGAEQVFFAFDNQDAAPYGLSSESSYQRLRLSLTP 120 Query: 121 TCHHSPEIYPGISEQR 136 I GI + Sbjct: 121 QPLPITRIDTGIRAAQ 136 >gi|237747123|ref|ZP_04577603.1| riboflavin biosynthesis protein RibD [Oxalobacter formigenes HOxBLS] gi|229378474|gb|EEO28565.1| riboflavin biosynthesis protein RibD [Oxalobacter formigenes HOxBLS] Length = 374 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 61/152 (40%), Gaps = 18/152 (11%) Query: 1 MKKGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + + FM ALE A+N + L + P VG V V N I+ R HAEI A Sbjct: 13 LTEHEFFMKRALELARNCSVLVSPNPKVGCVIVRNGHILGEGYTRPAGKN----HAEIEA 68 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + E +YVTLEPC CA A+ A + R+ +P Sbjct: 69 LNEA--VSRGEDCRGATVYVTLEPCAHFGRTPPCADALVRAGVSRVIAAMEDPNPLVAGK 126 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A H + GI +R++ + F Sbjct: 127 GLEKLKAAGIH----VICGILADEAREMNRGF 154 >gi|322377269|ref|ZP_08051761.1| riboflavin biosynthesis protein RibD [Streptococcus sp. M334] gi|321281982|gb|EFX58990.1| riboflavin biosynthesis protein RibD [Streptococcus sp. M334] Length = 366 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A++ AQ A N P VGAV V +N II + + HAE A++ Sbjct: 2 SDSKYMQLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----PHAERNALK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR LYVTLEPC C AI + I R+ G+ + G Sbjct: 58 N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ G+ E +I+ F Sbjct: 113 KILEENNL----QVTVGVLENECLNLIKSF 138 >gi|167746303|ref|ZP_02418430.1| hypothetical protein ANACAC_01012 [Anaerostipes caccae DSM 14662] gi|167654296|gb|EDR98425.1| hypothetical protein ANACAC_01012 [Anaerostipes caccae DSM 14662] Length = 354 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 58/146 (39%), Gaps = 21/146 (14%) Query: 8 MSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+E AQ P VGAV V + ++I + HAE A+ Sbjct: 1 MRRAIELAQKGTGHTNPNPLVGAVIVKDGQVIGEGFHEAYGGL----HAERNAL-----K 51 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E +LYVTLEPC C A+ + IR++Y G +P G + Sbjct: 52 SCTEDPKGAELYVTLEPCCHYGKTPPCTEAVIKSGIRKVYVGNVDPNPKVAGMGIKILRE 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145 H ++ GI ++ R++ FF Sbjct: 112 ----HGIKVETGILDEECRELNDIFF 133 >gi|191166718|ref|ZP_03028545.1| riboflavin biosynthesis protein RibD [Escherichia coli B7A] gi|309794861|ref|ZP_07689282.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 145-7] gi|190903229|gb|EDV62951.1| riboflavin biosynthesis protein RibD [Escherichia coli B7A] gi|308121514|gb|EFO58776.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 145-7] gi|320201655|gb|EFW76231.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-5-phosphoribosylaminouracil reductase [Escherichia coli EC4100B] Length = 367 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|260771105|ref|ZP_05880032.1| cytosine deaminase [Vibrio furnissii CIP 102972] gi|260613702|gb|EEX38894.1| cytosine deaminase [Vibrio furnissii CIP 102972] Length = 158 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 14/148 (9%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 ++ + A++A R P AV V N +I+ N D+T HAE L + Sbjct: 7 DYRWLRHSFALAEDAKSRGIHPFAAVLVDANGEILLEQINGYLPDLDMTGHAERLIMTQA 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ + L + LYV+ EPC MCA AI A + R+ YG S + + T Sbjct: 67 SKLYRPDFLNQCTLYVSAEPCAMCAGAIYWAGVGRVVYGLSETRLKALTG--NHPENPTL 124 Query: 123 -----------HHSPEIYPGISEQRSRQ 139 + E++ + E + Q Sbjct: 125 ALPCRIVFESGQRTTEVHGPLLEAEAEQ 152 >gi|294933962|ref|XP_002780922.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239891069|gb|EER12717.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 294 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 39/124 (31%), Positives = 52/124 (41%), Gaps = 1/124 (0%) Query: 2 KKGNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 K FM+ A A LR+ P GA V + IS A N KD T HAE+ AIR Sbjct: 17 KVDECFMTAACMSATAGVILRHGGPFGAAVVRDGMPISCAHNTVLYNKDPTCHAEVNAIR 76 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R L + L + LY + EPC MC AI + ++ +Y GA + + Sbjct: 77 HAVRHLGRSELSDCVLYTSCEPCPMCWGAIMASGLKVMYVGADRYCAAKFGFDDKAFYDE 136 Query: 121 TCHH 124 Sbjct: 137 FAGP 140 Score = 51.1 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 27/87 (31%) Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 AIRM L L +Y + +P A ARI +L+Y Q Sbjct: 200 AIRMAALTLGTHELSGCKVYASTQPDVFSHCACLWARISQLFYAERAADESEASYQRQQL 259 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 L G + + + + + Sbjct: 260 ALKAEDRDLMTTWGCAVEECENVFKQW 286 >gi|193068693|ref|ZP_03049654.1| riboflavin biosynthesis protein RibD [Escherichia coli E110019] gi|209917627|ref|YP_002291711.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli SE11] gi|218552977|ref|YP_002385890.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli IAI1] gi|260853634|ref|YP_003227525.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli O26:H11 str. 11368] gi|260866572|ref|YP_003232974.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli O111:H- str. 11128] gi|293418481|ref|ZP_06660916.1| riboflavin biosynthesis protein RibD [Escherichia coli B088] gi|300820347|ref|ZP_07100499.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 119-7] gi|300903321|ref|ZP_07121249.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 84-1] gi|301301562|ref|ZP_07207697.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 124-1] gi|331666763|ref|ZP_08367637.1| riboflavin biosynthesis protein RibD [Escherichia coli TA271] gi|192958056|gb|EDV88498.1| riboflavin biosynthesis protein RibD [Escherichia coli E110019] gi|209910886|dbj|BAG75960.1| pyrimidine deaminase/reductase [Escherichia coli SE11] gi|218359745|emb|CAQ97286.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli IAI1] gi|257752283|dbj|BAI23785.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli O26:H11 str. 11368] gi|257762928|dbj|BAI34423.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli O111:H- str. 11128] gi|291325009|gb|EFE64424.1| riboflavin biosynthesis protein RibD [Escherichia coli B088] gi|300404616|gb|EFJ88154.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 84-1] gi|300527132|gb|EFK48201.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 119-7] gi|300843059|gb|EFK70819.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 124-1] gi|315256239|gb|EFU36207.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 85-1] gi|323152118|gb|EFZ38411.1| riboflavin biosynthesis protein RibD [Escherichia coli EPECa14] gi|323184760|gb|EFZ70131.1| riboflavin biosynthesis protein RibD [Escherichia coli 1357] gi|323945315|gb|EGB41371.1| riboflavin biosynthesis protein RibD [Escherichia coli H120] gi|324016680|gb|EGB85899.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 117-3] gi|331065987|gb|EGI37871.1| riboflavin biosynthesis protein RibD [Escherichia coli TA271] Length = 367 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|119718363|ref|YP_925328.1| cytosine deaminase [Nocardioides sp. JS614] gi|119539024|gb|ABL83641.1| Cytosine deaminase [Nocardioides sp. JS614] Length = 154 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 34/147 (23%), Positives = 55/147 (37%), Gaps = 12/147 (8%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + A+EEA+ IP+GAV + + +++ NR +L H E + Sbjct: 2 TDEEMLVLAVEEARRGLAEGGIPIGAVLIHDGEVLGGGHNRRVQLGSAIRHGETDCLENI 61 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L + + TL PC MC AI L I R+ G + GG E Sbjct: 62 GR-LPASVYARSTMVTTLSPCDMCTGAILLYGIPRVVVGENRNFLGGEELLAS------- 113 Query: 123 HHSPEIYPGISEQR-SRQIIQDFFKER 148 E+ + + +++ F E Sbjct: 114 -RGVEVV--VLDDLGCVEMMATFIAEH 137 >gi|323144123|ref|ZP_08078762.1| riboflavin biosynthesis protein RibD [Succinatimonas hippei YIT 12066] gi|322416100|gb|EFY06795.1| riboflavin biosynthesis protein RibD [Succinatimonas hippei YIT 12066] Length = 366 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 38/147 (25%), Positives = 56/147 (38%), Gaps = 21/147 (14%) Query: 8 MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL+ A VG V V N II + HAEI+A+R Sbjct: 1 MKRALKLAARGKFTTSPNPAVGCVIVRNGMIIGEGYHHKAGE----PHAEIMAMRSAG-- 54 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + YVTLEPC CA A+ A ++R+ +P G + Sbjct: 55 ---SSVAGATCYVTLEPCSHYGRTPPCAKALVKAGVKRVVIACGDPNPQVAGRGVKILKD 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ G+ E ++ ++ + FFK Sbjct: 112 AG----IEVDVGLYENKALKLNRAFFK 134 >gi|221068807|ref|ZP_03544912.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] gi|220713830|gb|EED69198.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] Length = 162 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 32/83 (38%), Positives = 51/83 (61%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 P GAV V + +I++RA N+ EL D +AHAE+ A+R+G + L +Y + PC+ Sbjct: 31 PFGAVLVRDGQILARAVNQVDELCDPSAHAEMQALRIGAKAQGSTDLSGAVMYASGYPCS 90 Query: 85 MCAAAISLARIRRLYYGASNPKG 107 MC A+ LA ++++Y+ SN G Sbjct: 91 MCYTAMLLAGVKQVYFAYSNEDG 113 >gi|16128399|ref|NP_414948.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli str. K-12 substr. MG1655] gi|89107284|ref|AP_001064.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli str. K-12 substr. W3110] gi|170080000|ref|YP_001729320.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli str. K-12 substr. DH10B] gi|238899702|ref|YP_002925498.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli BW2952] gi|256023969|ref|ZP_05437834.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia sp. 4_1_40B] gi|300947935|ref|ZP_07162083.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 116-1] gi|300957979|ref|ZP_07170144.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 175-1] gi|301025699|ref|ZP_07189215.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 196-1] gi|301647336|ref|ZP_07247148.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 146-1] gi|331640931|ref|ZP_08342066.1| riboflavin biosynthesis protein RibD [Escherichia coli H736] gi|140252|sp|P25539|RIBD_ECOLI RecName: Full=Riboflavin biosynthesis protein RibD; Includes: RecName: Full=Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase; Includes: RecName: Full=5-amino-6-(5-phosphoribosylamino)uracil reductase; AltName: Full=HTP reductase gi|581147|emb|CAA45735.1| unnamed protein product [Escherichia coli K-12] gi|1773098|gb|AAB40170.1| riboflavin biosynthesis protein RibG [Escherichia coli] gi|1786616|gb|AAC73517.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli str. K-12 substr. MG1655] gi|73853031|emb|CAJ28593.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli] gi|85674554|dbj|BAE76194.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli str. K12 substr. W3110] gi|169887835|gb|ACB01542.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli str. K-12 substr. DH10B] gi|238861183|gb|ACR63181.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli BW2952] gi|260450399|gb|ACX40821.1| riboflavin biosynthesis protein RibD [Escherichia coli DH1] gi|299880011|gb|EFI88222.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 196-1] gi|300315315|gb|EFJ65099.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 175-1] gi|300452535|gb|EFK16155.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 116-1] gi|301074481|gb|EFK89287.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 146-1] gi|309700676|emb|CBI99972.1| riboflavin biosynthesis protein [Escherichia coli ETEC H10407] gi|315135096|dbj|BAJ42255.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli DH1] gi|323938599|gb|EGB34848.1| riboflavin biosynthesis protein RibD [Escherichia coli E1520] gi|323943220|gb|EGB39376.1| riboflavin biosynthesis protein RibD [Escherichia coli E482] gi|331037729|gb|EGI09949.1| riboflavin biosynthesis protein RibD [Escherichia coli H736] Length = 367 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|332529894|ref|ZP_08405846.1| cmp/dcmp deaminase zinc-binding protein [Hylemonella gracilis ATCC 19624] gi|332040688|gb|EGI77062.1| cmp/dcmp deaminase zinc-binding protein [Hylemonella gracilis ATCC 19624] Length = 170 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 14/158 (8%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 ++ + ++ A+ + N R P GAV V ++++ A E D T HAE A+R Sbjct: 15 ERDSSYLRQAITWSANGRARGNRPFGAVIVSEQGEVLAEAWCNTSETGDCTGHAETNAVR 74 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY-----------GASNPKGGG 109 + ++ ++ L LY + EPC MCA AI + I R+ Y G + Sbjct: 75 LVSPLVDRDTLARATLYSSAEPCVMCAGAIFWSNIGRVVYGIDAVRLRVFRGERAEQRDA 134 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + + + H E +++ Q F+K Sbjct: 135 ELSCRDVFASSP--HPIECIGPALIEQASAPHQGFWKR 170 >gi|310790867|gb|EFQ26400.1| cytidine and deoxycytidylate deaminase zinc-binding region [Glomerella graminicola M1.001] Length = 149 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 14/150 (9%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M ++ A+EEA+ A +P+GA V + K++ R NR ++ H E A+ Sbjct: 1 MNDAEG-LAIAIEEAKTGASEGGVPIGAALVSADGKLLGRGHNRRVQMGSAIHHGETDAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R+ + +Y TL PC MC A L I R+ G + GG Q Sbjct: 60 FNSGRLPGKAY-KGSTMYTTLSPCDMCTGACLLYGISRVVIGENRTFLGGEAYLKQ---- 114 Query: 120 ATCHHSPEIYPGISE-QRSRQIIQDFFKER 148 E+ + + + ++ F E+ Sbjct: 115 ----RGVEVV--VLDSAECKALMDKFIAEK 138 >gi|195623500|gb|ACG33580.1| cytidine/deoxycytidylate deaminase family protein [Zea mays] Length = 186 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F++ A+EEA + P GAV V N++++ N + D TAHAE+ AIR Sbjct: 29 DRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVCNDEVVVSCHNMVLKHTDPTAHAEVTAIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L + L + ++Y + EPC MC +A+ L+RI+RL YGA I Sbjct: 89 EACKKLGKIELSDCEIYASCEPCPMCFSAVHLSRIKRLVYGAKAEAAIAIGF 140 >gi|255631480|gb|ACU16107.1| unknown [Glycine max] Length = 156 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 34/85 (40%), Positives = 48/85 (56%) Query: 28 AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCA 87 A+ V N++I++R N D TAHAE+ IR C L+Q L + ++Y + EPC MC Sbjct: 26 AIIVCNDEIVARCHNMVLRNTDPTAHAEVTVIRKACEKLNQIELSDCEIYASCEPCPMCF 85 Query: 88 AAISLARIRRLYYGASNPKGGGIEN 112 AI L+R++RL YGA I Sbjct: 86 GAIHLSRVKRLVYGAKAEAAIAIGF 110 >gi|307312211|ref|ZP_07591847.1| riboflavin biosynthesis protein RibD [Escherichia coli W] gi|306907713|gb|EFN38215.1| riboflavin biosynthesis protein RibD [Escherichia coli W] gi|315059691|gb|ADT74018.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli W] gi|323379743|gb|ADX52011.1| riboflavin biosynthesis protein RibD [Escherichia coli KO11] gi|324116898|gb|EGC10811.1| riboflavin biosynthesis protein RibD [Escherichia coli E1167] Length = 367 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|51246637|ref|YP_066521.1| riboflavin biosynthesis protein (RibD) [Desulfotalea psychrophila LSv54] gi|50877674|emb|CAG37514.1| probable riboflavin biosynthesis protein (RibD) [Desulfotalea psychrophila LSv54] Length = 401 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 43/155 (27%), Positives = 65/155 (41%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++ +M AL EA+ R P VGA+ V + ++ R + K T HAE+ A Sbjct: 36 IELDQKYMLLALAEARRGQGRTSPNPCVGAIIVGDGSVVGRGYH----KKAGTPHAEVHA 91 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R YVTLEPC C A++ A + R+ G ++P Sbjct: 92 LRDAGEKA-----AGATAYVTLEPCSHTGRTPPCCVALAKAGVLRVVVGMTDPNPLVNGR 146 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G Q+ H E+ GI E R+I + F K+ Sbjct: 147 GVQYLRD----HGIEVSTGICEADCREINRPFIKK 177 >gi|312963303|ref|ZP_07777786.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens WH6] gi|311282383|gb|EFQ60981.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens WH6] Length = 378 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+N VG V V + +I+ + HAE+ A+R Sbjct: 12 DAHYMARALELARNGLYTTHPNPRVGCVIVRDGQIVGEGWHER--TGQP--HAEVHALRA 67 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ A + R+ +P G Q Sbjct: 68 AGDKA-----RGATAYVTLEPCSHYGHTPPCADALVSAGLARVVAAMQDPNPEVAGRGMQ 122 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + + F K Sbjct: 123 RLAQAG----IEVRSGVLEGEARALNRGFLKR 150 >gi|300818262|ref|ZP_07098473.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 107-1] gi|300529153|gb|EFK50215.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 107-1] Length = 367 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|170021214|ref|YP_001726168.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli ATCC 8739] gi|188492525|ref|ZP_02999795.1| riboflavin biosynthesis protein RibD [Escherichia coli 53638] gi|194438906|ref|ZP_03070991.1| riboflavin biosynthesis protein RibD [Escherichia coli 101-1] gi|253774601|ref|YP_003037432.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160480|ref|YP_003043588.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli B str. REL606] gi|300930291|ref|ZP_07145704.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 187-1] gi|312970509|ref|ZP_07784690.1| riboflavin biosynthesis protein RibD [Escherichia coli 1827-70] gi|169756142|gb|ACA78841.1| riboflavin biosynthesis protein RibD [Escherichia coli ATCC 8739] gi|188487724|gb|EDU62827.1| riboflavin biosynthesis protein RibD [Escherichia coli 53638] gi|194422200|gb|EDX38202.1| riboflavin biosynthesis protein RibD [Escherichia coli 101-1] gi|242376192|emb|CAQ30883.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli BL21(DE3)] gi|253325645|gb|ACT30247.1| riboflavin biosynthesis protein RibD [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972381|gb|ACT38052.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli B str. REL606] gi|253976591|gb|ACT42261.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli BL21(DE3)] gi|300461863|gb|EFK25356.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 187-1] gi|310337158|gb|EFQ02296.1| riboflavin biosynthesis protein RibD [Escherichia coli 1827-70] gi|323963400|gb|EGB58962.1| riboflavin biosynthesis protein RibD [Escherichia coli H489] gi|323972264|gb|EGB67474.1| riboflavin biosynthesis protein RibD [Escherichia coli TA007] Length = 367 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|23928436|gb|AAN40022.1| putative cytidine deaminase [Zea mays] Length = 180 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F++ A+EEA E P GAV V N++++ N + D AHAE+ AIR Sbjct: 23 DRDHKFLTKAVEEAYRGVDCGDEGPFGAVVVRNDEVVVSCHNMVLKHTDPIAHAEVTAIR 82 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L + L + ++Y + EPC MC A+ L+RI+RL YGA I Sbjct: 83 EACKKLGKIELSDCEIYASCEPCPMCFGALHLSRIKRLVYGAKAEAAIAIGF 134 >gi|311243850|ref|XP_003121217.1| PREDICTED: tRNA-specific adenosine deaminase 2 isoform 2 [Sus scrofa] Length = 152 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 8/107 (7%) Query: 49 DVTAHAEILAIRMGCRILS------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 + T HAE++AI E+ LYVT+EPC MCAAA+ L +I + YG Sbjct: 28 NATRHAEMVAIDQVLDWCHRGGKSPSEVFERTVLYVTVEPCIMCAAALRLMKIPLVVYGC 87 Query: 103 SNPKGGGIENGTQF--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 N + GG + L + PG + + ++++ F+K+ Sbjct: 88 QNERFGGCGSVLDIASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 134 >gi|78222833|ref|YP_384580.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine deaminase [Geobacter metallireducens GS-15] gi|78194088|gb|ABB31855.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Geobacter metallireducens GS-15] Length = 370 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 40/148 (27%), Positives = 60/148 (40%), Gaps = 21/148 (14%) Query: 5 NVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 M AL A+ + VG V V + I+ +R K T HAE+ A+R Sbjct: 6 EKIMKRALALARRGKGKTSPNPAVGCVIVRDGAIVGEGWHR----KAGTPHAEVHALRQA 61 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + D+YVTLEPC CA A+ A + R++ G +P G + Sbjct: 62 GELA-----RGADVYVTLEPCSHFGKTPPCADALVEAGVGRVFVGMVDPNPKVSGRGIER 116 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 +A E+ GI E R++ + F Sbjct: 117 LRVAG----IEVVTGIREAECRRLNEPF 140 >gi|255935941|ref|XP_002558997.1| Pc13g05630 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583617|emb|CAP91632.1| Pc13g05630 [Penicillium chrysogenum Wisconsin 54-1255] Length = 165 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 22/147 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 K FM AL + A E PVG V V N++I+ N +V Sbjct: 11 SKHGYFMKQALLMGEKAIQSGETPVGCVLVHNDQIVGYGMNDTNRSMNV----------K 60 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR-RLYYGASNPKGGGIENGTQFYTLA 120 + + L DLYVT+EPC MCA+A+ RIR ++ + Sbjct: 61 MLQSHPRSALQSTDLYVTVEPCVMCASALKQYRIRNKVV-----DRSRLTG------PSP 109 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147 + S +Y G+ E+ + +++ F+ + Sbjct: 110 SIDPSYPVYGGLFEKEAIMLLRRFYIQ 136 >gi|254773714|ref|ZP_05215230.1| cytidine/deoxycytidylate deaminase [Mycobacterium avium subsp. avium ATCC 25291] Length = 177 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 45/94 (47%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F ++ A+ P V V + ++++ + N+ + D TAHAEILAIR C L Sbjct: 15 FARRTIDLARQNVAEGGRPFATVIVQDGEVLAESANKAAQTNDPTAHAEILAIRAACLKL 74 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E L + +YV PC MC A+ R + + Sbjct: 75 GTEHLVDATIYVLAHPCPMCLGALYYCSPREVVF 108 >gi|331661791|ref|ZP_08362714.1| riboflavin biosynthesis protein RibD [Escherichia coli TA143] gi|331060213|gb|EGI32177.1| riboflavin biosynthesis protein RibD [Escherichia coli TA143] Length = 367 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|320173768|gb|EFW48951.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-5-phosphoribosylaminouracil reductase [Shigella dysenteriae CDC 74-1112] Length = 367 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|332202099|gb|EGJ16168.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae GA41317] Length = 366 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 60/150 (40%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A++ AQ A N P VGAV V +N II + + +HAE A++ Sbjct: 2 SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----SHAERNALK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR LYVTLEPC C AI + I R+ G+ + G Sbjct: 58 N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ GI E +I+ F Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138 >gi|225860210|ref|YP_002741719.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae Taiwan19F-14] gi|298230114|ref|ZP_06963795.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255023|ref|ZP_06978609.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae str. Canada MDR_19A] gi|298501980|ref|YP_003723920.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Streptococcus pneumoniae TCH8431/19A] gi|225726901|gb|ACO22752.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae Taiwan19F-14] gi|298237575|gb|ADI68706.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Streptococcus pneumoniae TCH8431/19A] gi|327390586|gb|EGE88926.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae GA04375] Length = 366 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 60/150 (40%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A++ AQ A N P VGAV V +N II + + +HAE A++ Sbjct: 2 SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----SHAERNALK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR LYVTLEPC C AI + I R+ G+ + G Sbjct: 58 N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ GI E +I+ F Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138 >gi|194397666|ref|YP_002036884.1| riboflavin biosynthesis protein [Streptococcus pneumoniae G54] gi|194357333|gb|ACF55781.1| riboflavin biosynthesis protein [Streptococcus pneumoniae G54] Length = 366 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 60/150 (40%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A++ AQ A N P VGAV V +N II + + +HAE A++ Sbjct: 2 SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----SHAERNALK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR LYVTLEPC C AI + I R+ G+ + G Sbjct: 58 N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ GI E +I+ F Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138 >gi|218693874|ref|YP_002401541.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli 55989] gi|218350606|emb|CAU96298.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli 55989] Length = 367 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|82542902|ref|YP_406849.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Shigella boydii Sb227] gi|81244313|gb|ABB65021.1| bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis [Shigella boydii Sb227] gi|320186043|gb|EFW60788.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-5-phosphoribosylaminouracil reductase [Shigella flexneri CDC 796-83] gi|332098511|gb|EGJ03477.1| riboflavin biosynthesis protein RibD [Shigella boydii 3594-74] Length = 367 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|226329108|ref|ZP_03804626.1| hypothetical protein PROPEN_03011 [Proteus penneri ATCC 35198] gi|225202294|gb|EEG84648.1| hypothetical protein PROPEN_03011 [Proteus penneri ATCC 35198] Length = 384 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A+E A + P VG V V +I+ + + HAE+ A++M Sbjct: 17 DEHYMRRAIELAALGRFTTSPNPNVGCVIVKEGEIVGEGYHHHAGG----PHAEVNALKM 72 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ A ++R+ +P G Sbjct: 73 AGDKA-----KGATAYVTLEPCSHFGKTPPCADALINAGVKRVVAAMQDPNPQVAGRGLH 127 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ GI Q + ++ FFK R Sbjct: 128 KLLSAG----IDVSHGILMQEAEKLNVGFFKRMR 157 >gi|187734040|ref|YP_001879123.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Shigella boydii CDC 3083-94] gi|187431032|gb|ACD10306.1| riboflavin biosynthesis protein RibD [Shigella boydii CDC 3083-94] Length = 367 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|328675280|gb|AEB27955.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Francisella cf. novicida 3523] Length = 355 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 57/154 (37%), Gaps = 22/154 (14%) Query: 1 MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MK +M AL A L VG + V N IIS + AHAE+ Sbjct: 1 MKNIDKYYMQQALSLANRGRLTVSPNPMVGCIIVKNGTIISEGWHETVGK----AHAEVH 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ +YVTLEPC C + A I+++ +P Sbjct: 57 ALTKVGDKA-----KGATVYVTLEPCCHHGRTPPCTDTLIKAGIKKVVIATLDPNPKVAG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A + G+ E++++++ + FF Sbjct: 112 KGVKKLKDAG----ITVEVGLLEKQAQELNKIFF 141 >gi|146297767|ref|YP_001192358.1| riboflavin biosynthesis protein RibD [Flavobacterium johnsoniae UW101] gi|146152185|gb|ABQ03039.1| riboflavin biosynthesis protein RibD [Flavobacterium johnsoniae UW101] Length = 349 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 64/160 (40%), Gaps = 22/160 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K ++ +E A+N VG+V V + II ++ HAE+ A Sbjct: 1 MNKHEKYIKRCIELARNGFGTTYPNPMVGSVIVYEDTIIGEGWHKKAGE----PHAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R + + +L + +YV+LEPC C I +I + G +P Sbjct: 57 VRS---VKDKSLLKKATIYVSLEPCSHFGKTPPCCDLIIANKIPNVVVGTVDPNEKVAGR 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 G + A + + GI E ++ + FF +++R Sbjct: 114 GIKKLIEAGAN----VVVGILEDECNELNKRFFTFHQKKR 149 >gi|303241094|ref|ZP_07327603.1| riboflavin biosynthesis protein RibD [Acetivibrio cellulolyticus CD2] gi|302591354|gb|EFL61093.1| riboflavin biosynthesis protein RibD [Acetivibrio cellulolyticus CD2] Length = 362 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 21/145 (14%) Query: 8 MSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 MS A+E A+ R P VGAV V + +II+ + AHAE+ A + Sbjct: 1 MSRAIELAKKGWGRTNPNPLVGAVIVKDERIIAEGFHEVIGG----AHAEVSAFKNAV-- 54 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E + LYV LEPC CA AI A+I+++ +P G Q Sbjct: 55 ---EDVAGGTLYVNLEPCSHYGRTPPCAKAIIEAKIKKVVVAMIDPNPKVSGRGVQMLRD 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E ++++ + F Sbjct: 112 AG----IEVEVGVLEDEAKKLNEIF 132 >gi|239627638|ref|ZP_04670669.1| riboflavin synthase subunit alpha [Clostridiales bacterium 1_7_47_FAA] gi|239517784|gb|EEQ57650.1| riboflavin synthase subunit alpha [Clostridiales bacterium 1_7_47FAA] Length = 370 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 44/156 (28%), Positives = 59/156 (37%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 N++M AL A R N P VGAV V + +I + + HAE Sbjct: 4 TSDNIYMGRALALAAKGEGRVNPNPLVGAVIVRDGAVIGQGYHGFYGG----PHAE---- 55 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R L+ LYVTLEPC C AI + IRR+ GA +P G Sbjct: 56 RAALDSLTAPA-KGAVLYVTLEPCCHYGKTPPCTDAIIKSGIRRVVIGAMDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 H E+ G+ E+ + + FF R Sbjct: 115 IAALKS----HGIEVIQGVLEEECIRQNEVFFHFIR 146 >gi|120434994|ref|YP_860680.1| bifunctional riboflavin biosynthesis protein RibD [Gramella forsetii KT0803] gi|117577144|emb|CAL65613.1| bifunctional riboflavin biosynthesis protein RibD [Gramella forsetii KT0803] Length = 347 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 22/160 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M ++ +E AQN VG+V V NKII ++ HAE+ A Sbjct: 1 MNIHEKYIKRCIELAQNGLGTTYPNPMVGSVIVYKNKIIGEGWHKKAGE----PHAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + Q +L +YV+LEPC C+ I I+++ G +P Sbjct: 57 INS---VKDQSLLKHAIIYVSLEPCSHFGKTPPCSDLIIAKGIKKVIIGTMDPFAKVAGR 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 G + A C E+ GI E+ ++ + FF K++R Sbjct: 114 GIKKLMDAGC----EVNVGILEEECLELNKRFFTFQKKQR 149 >gi|293408560|ref|ZP_06652399.1| riboflavin biosynthesis protein RibD [Escherichia coli B354] gi|291471738|gb|EFF14221.1| riboflavin biosynthesis protein RibD [Escherichia coli B354] Length = 367 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|52142146|ref|YP_084683.1| riboflavin biosynthesis protein; diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus cereus E33L] gi|51975615|gb|AAU17165.1| riboflavin biosynthesis protein; diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus cereus E33L] Length = 367 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 23/153 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M + ++M ALE A A P VG+V V +N+I+ + HAEI Sbjct: 1 MLEHELYMKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGE----PHAEIH 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 AIRM +YVTLEPC+ CA AI A I+++ +P Sbjct: 56 AIRMAGEQAC-----GGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSG 110 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ E+ S+++ + F Sbjct: 111 RGIKILQDAG----IEVLVGVCEEESKKMNEVF 139 >gi|37527755|ref|NP_931100.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787191|emb|CAE16271.1| riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP reductase)] [Photorhabdus luminescens subsp. laumondii TTO1] Length = 369 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 58/157 (36%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M+ ALE A+ + P VG V V + +I+ + HAE+ A Sbjct: 1 MNNDKKYMARALELARQGRFTTSPNPNVGCVIVHDGQIVGEGFHLRSGE----PHAEVYA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +++ +YVTLEPC CA A+ A + R+ +P Sbjct: 57 LQIAGDKA-----KGATVYVTLEPCSHHGKTPPCADALIAAGVSRVVAAMQDPNPQVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A + G+ + + + + F K R Sbjct: 112 GLYKLQQAG----IAVEHGLMMEEAESLNRGFLKRMR 144 >gi|315616646|gb|EFU97263.1| riboflavin biosynthesis protein RibD [Escherichia coli 3431] Length = 367 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIDAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|284920223|emb|CBG33282.1| riboflavin biosynthesis protein [Escherichia coli 042] Length = 367 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|23097878|ref|NP_691344.1| riboflavin specific deaminase [Oceanobacillus iheyensis HTE831] gi|22776102|dbj|BAC12379.1| riboflavin specific deaminase (diaminohydroxyphosphoribosylaminopyrimidine deaminase : 5-amino-6-(5-phosphoribosylamino) uracil reductase) [Oceanobacillus iheyensis HTE831] Length = 367 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M +M A+E A+ A++ + P VGAV V +N+I+ + HAEI Sbjct: 1 MTDDKHYMKLAIENAK--AMKGQTDPNPLVGAVIVNHNRIVGVGSHLKAGE----PHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 A++M E +YVTLEPC+ CA A+ A +RR+ +P Sbjct: 55 HALQMAG-----ENAKGATIYVTLEPCSHQGRTGPCALALVEAGVRRVVIATLDPNPLVA 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 NG + A E+ G+ E S + + F Sbjct: 110 GNGVKILEDAG----IEVEVGVLEDESISMNEVF 139 >gi|332885428|gb|EGK05677.1| riboflavin biosynthesis protein RibD [Dysgonomonas mossii DSM 22836] Length = 348 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 19/153 (12%) Query: 1 MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M L+ A + VGAV V N+KII +R AHAE+ A Sbjct: 1 MTVDEKYMYRCLQLALNGKGFVSPNPMVGAVVVHNDKIIGEGFHREYGK----AHAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + + +L E +YV+LEPC CA I +I + +P Sbjct: 57 I---ASVKDKSLLKESTIYVSLEPCAHQGKTPPCAQLIIDNQIPHVVIACLDPYPAVSGR 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A ++ GI E+ + ++ ++FF Sbjct: 114 GIKMLQDAG----IKVDVGILEREAWELNKEFF 142 >gi|160897646|ref|YP_001563228.1| CMP/dCMP deaminase [Delftia acidovorans SPH-1] gi|160363230|gb|ABX34843.1| CMP/dCMP deaminase zinc-binding [Delftia acidovorans SPH-1] Length = 153 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 51/106 (48%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ + A++ A + LR P GA+ +I+S N + D +AHAE+ A+R Sbjct: 4 QEHIRLLRHAVQLAHDNRLRGGRPFGALLAREGQILSTGVNEIVQSHDPSAHAEMQALRA 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 G R + L +Y + PC MC AA+ +A ++++ N Sbjct: 64 GTRAQANPSLAGCTIYASGHPCPMCLAALVMAGAEQVFFAFDNADA 109 >gi|317470714|ref|ZP_07930099.1| riboflavin biosynthesis protein RibD [Anaerostipes sp. 3_2_56FAA] gi|316901849|gb|EFV23778.1| riboflavin biosynthesis protein RibD [Anaerostipes sp. 3_2_56FAA] Length = 359 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 21/149 (14%) Query: 5 NVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A+E A+ N P VGAV V + ++I + HAE A+ Sbjct: 3 EQYMRRAIELAKKGTGYTNPNPLVGAVIVKDGEVIGEGFHEAYGGL----HAERNAL--- 55 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + +LYVTLEPC C A+ + IR++Y G +P G + Sbjct: 56 --KSCTKDPNGAELYVTLEPCCHYGRTPPCTEAVIKSGIRKVYVGNVDPNPKVAGMGIKI 113 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145 H E GI ++ R + FF Sbjct: 114 LRE----HGIEAETGILDEECRGLNDIFF 138 >gi|302873074|ref|YP_003841707.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B] gi|307688768|ref|ZP_07631214.1| CMP/dCMP deaminase zinc-binding protein [Clostridium cellulovorans 743B] gi|302575931|gb|ADL49943.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B] Length = 167 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 16/154 (10%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI- 59 M + M ALE + + + E+PVGAV ++II RA + + HAE+ + Sbjct: 1 MNIDDK-MRIALEIGKKSLEQGELPVGAVIFKGDEIIGRAYSSGESKQQFLRHAEMKVLW 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + + S + L+VTLEPC MC A A I +YY +P G + Sbjct: 60 EVDEQGYSVRDRKNMQLFVTLEPCMMCLGAAMGAFIGEIYYSVPSPIDGAVA-----LAE 114 Query: 120 ATCHHS---------PEIYPGISEQRSRQIIQDF 144 ++ + + P+ + G+ ++ +++++ + Sbjct: 115 SSLNSNNVEIPSYTLPKCFGGVLQEEGKELLKRY 148 >gi|264678844|ref|YP_003278751.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] gi|262209357|gb|ACY33455.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] Length = 146 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 47/100 (47%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A++ A L+ P GAV N++++ N D + HAE+ AIR G + + Sbjct: 1 MRMAVDLAHANRLKGGRPFGAVLAQGNEVVATGVNEIIASHDPSTHAEMQAIRAGTQKRA 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 L + +Y + PC MC AA+ + ++++ N Sbjct: 61 NPSLAGLSIYASGHPCPMCLAALVMNGAEQVFFAFDNQDA 100 >gi|259909281|ref|YP_002649637.1| Riboflavin biosynthesis protein RibD [Erwinia pyrifoliae Ep1/96] gi|224964903|emb|CAX56426.1| Riboflavin biosynthesis protein RibD [Erwinia pyrifoliae Ep1/96] gi|283479336|emb|CAY75252.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Erwinia pyrifoliae DSM 12163] Length = 367 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++M+ ALE A+ P VG V V + +I+ + HAE+ A+R Sbjct: 2 RDEIYMARALELARRGRFTTTPNPNVGCVLVRDGQIVGEGYHMLAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A I+R+ +P G Sbjct: 58 MAGEKS-----LGATAYVTLEPCSHHGRTPPCCEALIAAGIKRVVTAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ Q + + + F K R Sbjct: 113 YRLQQAG----IEVSHGLMMQEAEALNRGFLKRMR 143 >gi|219849511|ref|YP_002463944.1| riboflavin biosynthesis protein RibD [Chloroflexus aggregans DSM 9485] gi|219543770|gb|ACL25508.1| riboflavin biosynthesis protein RibD [Chloroflexus aggregans DSM 9485] Length = 409 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 43/150 (28%), Positives = 61/150 (40%), Gaps = 21/150 (14%) Query: 5 NVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL AQ AA R P VGAV V + +I+ +R HAE+ A+R+ Sbjct: 8 ETYMRRALVLAQQAAGRTSPNPMVGAVIVKDGRIVGEGYHRRAGE----PHAEVEALRVA 63 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 +YVTLEPC C AI A I +YY ++P G Sbjct: 64 GEAA-----RGATMYVTLEPCAHVGRTPPCTDAIIAAGITEVYYAIADPNPLVSGKGHAQ 118 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A + G+ E + ++ + FFK Sbjct: 119 LAAAG----IRVQCGVCEAEAFELNRPFFK 144 >gi|310777941|ref|YP_003966274.1| CMP/dCMP deaminase zinc-binding protein [Ilyobacter polytropus DSM 2926] gi|309747264|gb|ADO81926.1| CMP/dCMP deaminase zinc-binding protein [Ilyobacter polytropus DSM 2926] Length = 159 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 1/105 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +E ++ + P GA+ V I+ +GN KD+T HAE ++ Sbjct: 2 DHEKYLRRCIEISEESVASGNNPFGALLVDKEGNILIESGNIEVTEKDITGHAETTVAKL 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 + S+E L E LY T EPC MC AI A I + YG S K Sbjct: 62 AGKKYSKEFLWETTLYTTAEPCCMCTGAIYWANIGNVVYGISEKK 106 >gi|15614117|ref|NP_242420.1| riboflavin specific deaminase [Bacillus halodurans C-125] gi|10174171|dbj|BAB05273.1| riboflavin specific deaminase(diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase) [Bacillus halodurans C-125] Length = 368 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 61/158 (38%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL A++A + P VGAV V + +I+ + HAE+ AIR Sbjct: 2 TDEQYMKLALALAESARGQTSPNPLVGAVVVKDGQIVGMGAHLKAGE----PHAEVHAIR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC CA + A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHYGKTPPCADLLIEAGVARVVIATEDPFPKVSGRGI 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ GI +Q + + + FF + +R Sbjct: 113 RKLQQAG----IEVEVGICKQEALDLNRIFFHFVRTKR 146 >gi|302345996|ref|YP_003814349.1| riboflavin biosynthesis protein RibD [Prevotella melaninogenica ATCC 25845] gi|302150238|gb|ADK96500.1| riboflavin biosynthesis protein RibD [Prevotella melaninogenica ATCC 25845] Length = 372 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 59/152 (38%), Gaps = 18/152 (11%) Query: 2 KKGNVFMSCALEEAQNA--ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58 K +M L+ A+N + VGAV V +II + HAE+ A Sbjct: 5 KTDEKYMRRCLQLARNGQQLAKPNPMVGAVIVSKEGRIIGEGYHVRCGKG----HAEVNA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 R + +L E +YV+LEPC CA I +RR+ G +P Sbjct: 61 F-ASVRKEDEALLREATVYVSLEPCSHYGKTPPCADLIISKGVRRVVCGCIDPFAEVQGR 119 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ E+ ++ + F Sbjct: 120 GVKKIREAG----IEVTVGVLEKECLELNKRF 147 >gi|225858039|ref|YP_002739549.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae 70585] gi|225721875|gb|ACO17729.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae 70585] Length = 366 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A++ AQ A N P VGAV V +N II + + HAE A++ Sbjct: 2 SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----PHAERNALK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR LYVTLEPC C AI + I R+ G+ + G Sbjct: 58 N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ GI E +I+ F Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138 >gi|221231089|ref|YP_002510241.1| riboflavin biosynthesis protein [Streptococcus pneumoniae ATCC 700669] gi|220673549|emb|CAR68035.1| riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase] [Streptococcus pneumoniae ATCC 700669] Length = 366 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A++ AQ A N P VGAV V +N II + + HAE A++ Sbjct: 2 SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----PHAERNALK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR LYVTLEPC C AI + I R+ G+ + G Sbjct: 58 N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ GI E +I+ F Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138 >gi|183603379|ref|ZP_02714555.2| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae SP195] gi|183571310|gb|EDT91838.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae SP195] Length = 384 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A++ AQ A N P VGAV V +N II + + HAE A++ Sbjct: 20 SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----PHAERNALK 75 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR LYVTLEPC C AI + I R+ G+ + G Sbjct: 76 N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 130 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ GI E +I+ F Sbjct: 131 KILEENNL----QVTVGILENECLNLIKSF 156 >gi|168486049|ref|ZP_02710557.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae CDC1087-00] gi|183570882|gb|EDT91410.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae CDC1087-00] Length = 366 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A++ AQ A N P VGAV V +N II + + HAE A++ Sbjct: 2 SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----PHAERNALK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR LYVTLEPC C AI + I R+ G+ + G Sbjct: 58 N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ GI E +I+ F Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138 >gi|148992759|ref|ZP_01822402.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae SP9-BS68] gi|147928485|gb|EDK79500.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae SP9-BS68] gi|332075850|gb|EGI86317.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae GA17570] Length = 366 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A++ AQ A N P VGAV V +N II + + HAE A++ Sbjct: 2 SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----PHAERNALK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR LYVTLEPC C AI + I R+ G+ + G Sbjct: 58 N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ GI E +I+ F Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138 >gi|149011050|ref|ZP_01832355.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae SP19-BS75] gi|149017852|ref|ZP_01834311.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae SP23-BS72] gi|168492136|ref|ZP_02716279.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae CDC0288-04] gi|225853791|ref|YP_002735303.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae JJA] gi|237649748|ref|ZP_04524000.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae CCRI 1974] gi|237821446|ref|ZP_04597291.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae CCRI 1974M2] gi|147764686|gb|EDK71616.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae SP19-BS75] gi|147931416|gb|EDK82394.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae SP23-BS72] gi|183573645|gb|EDT94173.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae CDC0288-04] gi|225723048|gb|ACO18901.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae JJA] gi|301793457|emb|CBW35830.1| riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase] [Streptococcus pneumoniae INV104] gi|332077484|gb|EGI87945.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae GA41301] gi|332204191|gb|EGJ18256.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae GA47901] Length = 366 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A++ AQ A N P VGAV V +N II + + HAE A++ Sbjct: 2 SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----PHAERNALK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR LYVTLEPC C AI + I R+ G+ + G Sbjct: 58 N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ GI E +I+ F Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138 >gi|15900115|ref|NP_344719.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae TIGR4] gi|14971645|gb|AAK74359.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae TIGR4] Length = 366 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A++ AQ A N P VGAV V +N II + + HAE A++ Sbjct: 2 SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----PHAERNALK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR LYVTLEPC C AI + I R+ G+ + G Sbjct: 58 N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ GI E +I+ F Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138 >gi|15902208|ref|NP_357758.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae R6] gi|116515773|ref|YP_815688.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae D39] gi|148996604|ref|ZP_01824322.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae SP11-BS70] gi|168576390|ref|ZP_02722273.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae MLV-016] gi|182683162|ref|YP_001834909.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae CGSP14] gi|303255119|ref|ZP_07341195.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae BS455] gi|307066860|ref|YP_003875826.1| pyrimidine reductase, riboflavin biosynthesis [Streptococcus pneumoniae AP200] gi|15457706|gb|AAK98968.1| Riboflavin biosynthese; a deaminase [Streptococcus pneumoniae R6] gi|116076349|gb|ABJ54069.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae D39] gi|147757179|gb|EDK64218.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae SP11-BS70] gi|182628496|gb|ACB89444.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae CGSP14] gi|183577789|gb|EDT98317.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae MLV-016] gi|301801129|emb|CBW33802.1| riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase] [Streptococcus pneumoniae INV200] gi|302597949|gb|EFL65019.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae BS455] gi|306408397|gb|ADM83824.1| Pyrimidine reductase, riboflavin biosynthesis [Streptococcus pneumoniae AP200] Length = 366 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A++ AQ A N P VGAV V +N II + + HAE A++ Sbjct: 2 SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----PHAERNALK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR LYVTLEPC C AI + I R+ G+ + G Sbjct: 58 N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ GI E +I+ F Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138 >gi|212709165|ref|ZP_03317293.1| hypothetical protein PROVALCAL_00198 [Providencia alcalifaciens DSM 30120] gi|212688077|gb|EEB47605.1| hypothetical protein PROVALCAL_00198 [Providencia alcalifaciens DSM 30120] Length = 371 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +++ ++M+ A E A+ + P VG V V + +I+ ++ HAE+ A Sbjct: 2 LEQDRIYMARAFELAKEGRFTTSPNPNVGCVIVRDGEIVGEGYHQKAGE----PHAEVHA 57 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM YVTLEPC CA A+ A I R+ +P Sbjct: 58 LRMAGDKA-----KGATAYVTLEPCSHHGRTPPCAEALINAGISRVVAAMQDPNPQVAGR 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A E I + + + + F K R Sbjct: 113 GLYMLNQAG----IETASNILLEEAEALNRGFLKRMR 145 >gi|83775265|dbj|BAE65387.1| unnamed protein product [Aspergillus oryzae] Length = 145 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 54/107 (50%) Query: 41 GNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + T HAE +A+ R + +L LYVT+EPC MCA+A+ RI+ +Y+ Sbjct: 4 HSCEEADLSGTRHAEFIALERMLRNYPKSLLRSTKLYVTVEPCVMCASALRQYRIQAVYF 63 Query: 101 GASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G SN + GG + +T + +Y G+ + + +++ F+ + Sbjct: 64 GCSNERFGGTGSILSLHTDFSIDPPYPVYGGLFSKEAVMLLRRFYIQ 110 >gi|148380824|ref|YP_001255365.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str. ATCC 3502] gi|153933315|ref|YP_001385131.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str. ATCC 19397] gi|153935215|ref|YP_001388600.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str. Hall] gi|148290308|emb|CAL84432.1| riboflavin biosynthesis protein ribd [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Clostridium botulinum A str. ATCC 3502] gi|152929359|gb|ABS34859.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str. ATCC 19397] gi|152931129|gb|ABS36628.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str. Hall] Length = 365 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 40/156 (25%), Positives = 62/156 (39%), Gaps = 25/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M+ N +M AL+ A+ ++ P VGA+ V NNKII ++ HAE+ Sbjct: 1 MEDYNFYMEKALKLAERG--EGKVNPNPKVGAIVVNNNKIIGEGYHKYFGG----PHAEV 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++ +YVTLEPC CA +I I + +P Sbjct: 55 YALKEAGEKA-----KGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVE 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G E+ GI E+ S+++ + F K Sbjct: 110 GRGIDILKQNG----IEVITGIMEKESKKLNEVFIK 141 >gi|297622519|ref|YP_003703953.1| riboflavin biosynthesis protein RibD [Truepera radiovictrix DSM 17093] gi|297163699|gb|ADI13410.1| riboflavin biosynthesis protein RibD [Truepera radiovictrix DSM 17093] Length = 393 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 57/150 (38%), Gaps = 18/150 (12%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +MS ALE A+ VG V V +++II + AHAE+ A++ Sbjct: 11 EHERYMSRALELAERGRGSTAPNPMVGCVIVRDDEIIGEGWHERAGE----AHAEVRALQ 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + LYVTLEPC C AI A +RR+ A +P +G Sbjct: 67 DA--RSRGARVRGATLYVTLEPCNHTGRTPPCTEAILEAGVRRVVIAALDPDPRVDGSGV 124 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ + + F Sbjct: 125 ARLQAAG----VEVVTGVLAAEAEAQNEVF 150 >gi|302817816|ref|XP_002990583.1| hypothetical protein SELMODRAFT_448085 [Selaginella moellendorffii] gi|300141751|gb|EFJ08460.1| hypothetical protein SELMODRAFT_448085 [Selaginella moellendorffii] Length = 1449 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + F+S A++EA + P GAV V NN+++ N D TAHAE+ A+R Sbjct: 59 DRDYKFLSKAVDEAYKGVTCGDGGPFGAVVVRNNEVVVSCHNMVLRHTDPTAHAEVTAVR 118 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L++ L + +++ + EPC MC AI L+RI+RL YGA + F A Sbjct: 119 EACKKLNRLELSDCEIFASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAVGF-DDFIADA 177 >gi|327405290|ref|YP_004346128.1| riboflavin biosynthesis protein RibD [Fluviicola taffensis DSM 16823] gi|327320798|gb|AEA45290.1| riboflavin biosynthesis protein RibD [Fluviicola taffensis DSM 16823] Length = 347 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 27/156 (17%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-----P-VGAVAVLNNKIISRAGNRNRELKDVTAHA 54 M +M AL+ A+ I P VGAV V N +II ++ AHA Sbjct: 1 MNLDEKYMLRALQLAK----SGGISVAPNPLVGAVIVHNQQIIGEGYHQKYGE----AHA 52 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108 E+ A+ + + +L E +YVTLEPC CA + ++ +R+ +P Sbjct: 53 EVNAVNS---VKDKSLLSESTIYVTLEPCSHFGKTPPCADLLVHSQFKRVVIAQIDPFSE 109 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + + ++ GI E ++++ + F Sbjct: 110 VAGRGIEKLK----NAGIQVDCGILESEAKELNKRF 141 >gi|329298304|ref|ZP_08255640.1| riboflavin biosynthesis protein RibD [Plautia stali symbiont] Length = 367 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 55/155 (35%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ ALE A+ P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 TDAHYMARALELARRGQYTTTPNPNVGCVIVRDGEIVGEGWHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGDHAC-----GATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ + + + F K R Sbjct: 113 YRLQQAG----IEVSHGLMMNEAEALNRGFLKRMR 143 >gi|159901995|gb|ABX10725.1| cytidine and deoxycytidylate deaminase family protein [uncultured planctomycete 13FN] Length = 164 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 13/147 (8%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIR 60 M A+E A+ P GAV V + I++ NR K+ T HAEI I Sbjct: 5 NHESSMRHAIEVAKANPRH---PFGAVIVSSASEVIVAEGVNR--SSKNPTLHAEIDVIN 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP---KGGGIENGTQFY 117 + LY T EPC MC +AI + ++ + YG S P + G + + Sbjct: 60 NYAASGGT-DWHRLTLYTTAEPCPMCMSAILWSGVKSIVYGTSIPTLVRLGWDQIDIRAT 118 Query: 118 TLATCHHSP--EIYPGISEQRSRQIIQ 142 +A H E+ PG+ + + Sbjct: 119 EVAAKSHQTSCEVIPGVLVSECDALFR 145 >gi|261876153|ref|YP_695000.2| riboflavin biosynthesis protein RibD [Clostridium perfringens ATCC 13124] gi|255529887|gb|ABG83871.2| riboflavin biosynthesis protein RibD [Clostridium perfringens ATCC 13124] Length = 371 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 55/149 (36%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM ALE A+ N P VGAV V +II + + HAEI AI Sbjct: 8 DEFFMKKALELARKGEGYVNPNPLVGAVIVKGGEIIGQGYHEFFGGN----HAEINAINS 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + +YVTLEPC C AI + +R+ G + + Sbjct: 64 SIKST-----EGATIYVTLEPCCHYGKTPPCIEAIIKNKFKRVVVGTLDQNPLVSGKSIK 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + E+ G+ E+ ++ + F Sbjct: 119 ILRESG----IEVKVGVLEKECIRLNEIF 143 >gi|168216370|ref|ZP_02641995.1| riboflavin biosynthesis protein RibD [Clostridium perfringens NCTC 8239] gi|182381291|gb|EDT78770.1| riboflavin biosynthesis protein RibD [Clostridium perfringens NCTC 8239] Length = 365 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 55/149 (36%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM ALE A+ N P VGAV V +II + + HAEI AI Sbjct: 2 DEFFMKKALELARKGEGYVNPNPLVGAVIVKGGEIIGQGYHEFFGGN----HAEINAINS 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + +YVTLEPC C AI + +R+ G + + Sbjct: 58 SIKST-----EGATIYVTLEPCCHYGKTPPCIEAIIKNKFKRVVVGTLDQNPLVSGKSIK 112 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + E+ G+ E+ ++ + F Sbjct: 113 ILRESG----IEVKVGVLEKECIRLNEIF 137 >gi|41406760|ref|NP_959596.1| hypothetical protein MAP0662c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118463808|ref|YP_880050.1| cytidine/deoxycytidylate deaminase [Mycobacterium avium 104] gi|41395110|gb|AAS02979.1| hypothetical protein MAP_0662c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118165095|gb|ABK65992.1| cytidine/deoxycytidylate deaminase [Mycobacterium avium 104] Length = 166 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 45/94 (47%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F ++ A+ P V V + ++++ + N+ + D TAHAEILAIR C L Sbjct: 4 FARRTIDLARQNVAEGGRPFATVIVQDGEVLAESANKAAQTNDPTAHAEILAIRAACLKL 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E L + +YV PC MC A+ R + + Sbjct: 64 GTEHLVDATIYVLAHPCPMCLGALYYCSPREVIF 97 >gi|323191332|gb|EFZ76595.1| riboflavin biosynthesis protein RibD [Escherichia coli RN587/1] Length = 367 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ + HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|295704047|ref|YP_003597122.1| riboflavin biosynthesis protein RibD [Bacillus megaterium DSM 319] gi|294801706|gb|ADF38772.1| riboflavin biosynthesis protein RibD [Bacillus megaterium DSM 319] Length = 363 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 21/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M+ AL+ A++ + E P VG+V V +N+I+ + HAEI A Sbjct: 1 MINHEFYMNIALQNARSTKGQTEPNPLVGSVIVNDNRIVGIGTHLKAGE----PHAEIHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 +RM E YVTLEPC+ CA A+ A ++++ +P N Sbjct: 57 LRMAG-----EQAKGATAYVTLEPCSHHGRTGPCAEALVEAGVKKVVIATLDPNPLVAGN 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + + E+ G+ E+ SRQ+ + F Sbjct: 112 GVEILK----NAGIEVITGVCEEESRQMNEVF 139 >gi|89891631|ref|ZP_01203135.1| riboflavin biosynthesis protein RibD [Flavobacteria bacterium BBFL7] gi|89516178|gb|EAS18841.1| riboflavin biosynthesis protein RibD [Flavobacteria bacterium BBFL7] Length = 337 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 41/160 (25%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRNRELKDVTAHAEI 56 M + +M L+ AQN P VG+V V N++II + LK HAE+ Sbjct: 1 MTTEDKYMQRCLQLAQNGLGTT-YPNPLVGSVIVSENDEIIGEGWH----LKSGEPHAEV 55 Query: 57 LAIRMGCRILSQEI-LPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109 A+R + + +YV LEPC CA+ I +++ G +P Sbjct: 56 NAVRDAEKKGYDGDAFAKATIYVNLEPCSHTGKTPPCASMIVQKGFKKVVVGTLDPHDKV 115 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A E+ GI E+ ++ + FF R Sbjct: 116 AGKGITIIEKAG----IEVVVGILEKECNELNKRFFTFHR 151 >gi|58578775|ref|YP_196987.1| riboflavin biosynthesis protein ribD [Ehrlichia ruminantium str. Welgevonden] gi|58417401|emb|CAI26605.1| Riboflavin biosynthesis protein ribD [Ehrlichia ruminantium str. Welgevonden] Length = 370 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 25/152 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 FMS AL A+ + P VG + V + ++ R + HAEI+A+ Sbjct: 10 DKKFMSLALRLARRGL--GNVFPNPAVGCIIVNDGVVVGRGWTQVGGR----PHAEIVAL 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 + YVTLEPC+ C + A I+R+ ++P NG Sbjct: 64 DNVKHLA-----KGATAYVTLEPCSHYGKTGPCVLNLINAGIKRVVIATNDPDMRVSGNG 118 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A E+ G+ + +R + FF Sbjct: 119 IKLLRDAN----VEVRCGVMDNEARALNIGFF 146 >gi|57238845|ref|YP_179981.1| riboflavin biosynthesis protein ribD [Ehrlichia ruminantium str. Welgevonden] gi|57160924|emb|CAH57829.1| riboflavin biosynthesis protein RibD [Ehrlichia ruminantium str. Welgevonden] Length = 365 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 25/152 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 FMS AL A+ + P VG + V + ++ R + HAEI+A+ Sbjct: 5 DKKFMSLALRLARRGL--GNVFPNPAVGCIIVNDGVVVGRGWTQVGGR----PHAEIVAL 58 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 + YVTLEPC+ C + A I+R+ ++P NG Sbjct: 59 DNVKHLA-----KGATAYVTLEPCSHYGKTGPCVLNLINAGIKRVVIATNDPDMRVSGNG 113 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A E+ G+ + +R + FF Sbjct: 114 IKLLRDAN----VEVRCGVMDNEARALNIGFF 141 >gi|307609878|emb|CBW99403.1| hypothetical protein LPW_11791 [Legionella pneumophila 130b] Length = 154 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 46/94 (48%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ +E A+ P + V N KI++ A N + D TAHAE+ AIR+ L Sbjct: 3 FIKRTIELARENVEHGGRPFACLIVQNGKILAEATNTVAQTHDPTAHAEVNAIRIATAKL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E L + D Y+ PC MC AA+ R++ + Sbjct: 63 GCEHLYDCDFYILAHPCPMCLAAMYYCSPRKVIF 96 >gi|327312630|ref|YP_004328067.1| riboflavin biosynthesis protein RibD [Prevotella denticola F0289] gi|326946400|gb|AEA22285.1| riboflavin biosynthesis protein RibD [Prevotella denticola F0289] Length = 380 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 18/152 (11%) Query: 2 KKGNVFMSCALEEAQNA--ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58 K ++M L+ A+N + VGAV V + +II + HAE+ A Sbjct: 5 KTDEIYMRRCLQLARNGQQLAKPNPMVGAVIVSKDGRIIGEGYHVRCGEG----HAEVNA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 R + +L E +YV+LEPC CA I +RR+ G +P Sbjct: 61 F-ASVRKEDEALLHEATVYVSLEPCSHYGKTPPCADLIISKGVRRVVCGCIDPFSKVQGR 119 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A ++ G+ E+ ++ + F Sbjct: 120 GVKRLREAG----IDVTVGVLEKECLELNKRF 147 >gi|227893613|ref|ZP_04011418.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Lactobacillus ultunensis DSM 16047] gi|227864473|gb|EEJ71894.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Lactobacillus ultunensis DSM 16047] Length = 352 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+K +M+ AL+EA+ + P VGAV V NN++++ + + HAE A Sbjct: 1 MEKDQYYMNLALQEAKKGRFQTWKNPMVGAVIVKNNQVLATGHHIHYGQN----HAERDA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I L+ E L LYVTLEPC C+ I ++I+R+ G +P Sbjct: 57 I----SKLTPEQLFNSTLYVTLEPCNHYGKQPPCSDLIVKSKIKRVVIGQVDPHKLVTGK 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G H+ E+ G+ + ++ + F+ Sbjct: 113 GIAKLKS----HNIEVKTGVLTSKIEELNK-FY 140 >gi|318042353|ref|ZP_07974309.1| putative cytosine deaminase [Synechococcus sp. CB0101] Length = 144 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 4/103 (3%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A +EAQ + + IP+GAV + I++R N+ + D T+H E IR R Sbjct: 5 MDAARQEAQQSWMEGGIPIGAVLAREDGTIVARGHNQRVQNGDPTSHGETQCIRNAGRRR 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 ++ L TL PC MCA L RR+ G G Sbjct: 65 ---DWRDLTLVTTLSPCPMCAGTAVLLGFRRVLIGERRSFQGA 104 >gi|221066605|ref|ZP_03542710.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] gi|220711628|gb|EED66996.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] Length = 146 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 46/100 (46%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M A+ A L+ P GAV N++++ N D + HAE+ AIR G + + Sbjct: 1 MRLAVNLAHANRLQGGRPFGAVLAQGNEVVATGVNEIIASHDPSTHAEMQAIRAGTQQRA 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 L + +Y + PC MC AA+ + ++++ N Sbjct: 61 NPSLAGLSIYASGHPCPMCLAALVMNGAEQVFFAFDNQDA 100 >gi|297201565|ref|ZP_06918962.1| cytidine/deoxycytidine deaminase [Streptomyces sviceus ATCC 29083] gi|197711065|gb|EDY55099.1| cytidine/deoxycytidine deaminase [Streptomyces sviceus ATCC 29083] Length = 152 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 13/143 (9%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + +++ A+EEA+ IP+GA + ++ R NR + D + HAE A R Sbjct: 8 QAHRWLATAVEEARAGLAEGGIPIGAALYGADGTLLGRGHNRRVQDGDPSLHAETAAFRA 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R S + TL PC C+ + I R+ G + GG + + Sbjct: 68 AGRQRS---YRGTTMVTTLSPCWYCSGLVRQFGIGRVVVGEATTFHGGHDWLAE------ 118 Query: 122 CHHSPEIYPGISEQRSRQIIQDF 144 H EI + + +++ DF Sbjct: 119 --HGVEIVL-VDDPECVRMMTDF 138 >gi|76160949|gb|ABA40438.1| unknown [Solanum tuberosum] Length = 186 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F++ A+EEA + P GAV V NN+++ N + D TAHAE+ A+R Sbjct: 29 DRDHKFLTQAVEEAYKGVECGDGGPFGAVVVCNNEVVVSCHNMVLKHTDPTAHAEVTAVR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L++ L + ++Y + EPC MC AI L+RI+RL YGA I Sbjct: 89 EACKKLNRIELADCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF 140 >gi|255038066|ref|YP_003088687.1| riboflavin biosynthesis protein RibD [Dyadobacter fermentans DSM 18053] gi|254950822|gb|ACT95522.1| riboflavin biosynthesis protein RibD [Dyadobacter fermentans DSM 18053] Length = 354 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 20/155 (12%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M+ N +M AL+ A R + P VG V V + +II +R HAE+ Sbjct: 1 METDNQWMERALQLA--GYGRGAVSPNPMVGCVIVHDGRIIGEGWHRAYGG----PHAEV 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 AI + +LP+ YVTLEPC CA + R++R+ ++P Sbjct: 55 RAIEDTDARGNSHLLPQATAYVTLEPCSHTGKTPPCADLLVSRRLKRVVICNNDPNPLVS 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A E+ G++E ++ + FF Sbjct: 115 GRGIRRLREAG----IEVECGVAEAAGTELNKRFF 145 >gi|269792620|ref|YP_003317524.1| riboflavin biosynthesis protein RibD [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100255|gb|ACZ19242.1| riboflavin biosynthesis protein RibD [Thermanaerovibrio acidaminovorans DSM 6589] Length = 377 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEA-QNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL A + + P VG V V + +++ ++ HAE+ A+ M Sbjct: 18 HGYFMRMALSLAIRGGTAVSPNPKVGCVIVKDGQVVGWGYHKRYGG----PHAEVEALTM 73 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A IRR+ YG +P G + Sbjct: 74 AG-----DRAQGATAYVTLEPCSHHGKTPPCAPRLVEAGIRRVVYGMMDPNPKVNGRGLE 128 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 E+ + E R R + F + Sbjct: 129 ILASGG----VEVVGPVMEDRCRWENRGFIRR 156 >gi|332341777|gb|AEE55111.1| riboflavin biosynthesis protein RibD [Escherichia coli UMNK88] Length = 367 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ + HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|315634417|ref|ZP_07889704.1| riboflavin biosynthesis protein RibD [Aggregatibacter segnis ATCC 33393] gi|315477007|gb|EFU67752.1| riboflavin biosynthesis protein RibD [Aggregatibacter segnis ATCC 33393] Length = 374 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 29/159 (18%) Query: 3 KGNVFMSCALEEAQNAALRNE---IP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 + FM AL+ A+ + E P VG V V + +++ + + HAE+ Sbjct: 8 QDAAFMQLALDLAK----QGEFTTTPNPSVGCVLVKDGEVVGKGFHAKAGE----PHAEV 59 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 +A+R YVTLEPC CA + A + ++ +P Sbjct: 60 MALREAGEKA-----RGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVA 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G Q + A + G+ E+ + Q+ + F K R Sbjct: 115 GKGLQILSDAGIQSAV----GLLEENAEQLNKGFLKRMR 149 >gi|288904903|ref|YP_003430125.1| riboflavin-specific deaminase [Streptococcus gallolyticus UCN34] gi|288731629|emb|CBI13184.1| riboflavin-specific deaminase [Streptococcus gallolyticus UCN34] Length = 351 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 39/145 (26%), Positives = 59/145 (40%), Gaps = 19/145 (13%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ A+ EA+ + VGAV V N ++I+R + + HAE AI Sbjct: 2 HENYMAQAIAEAKKGFRQTYTNPLVGAVIVKNGRVIARGAHLQYGHE----HAEKNAI-- 55 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + E L LYVTLEPC C AI A I+++ G +P G + Sbjct: 56 -LHCEAPEELTNSTLYVTLEPCHHTGKQPPCTQAIVEAGIKKVVVGQLDPNPLVAGKGLE 114 Query: 116 FYTLATCHHSPEIYPGISEQRSRQI 140 F E+ + E +R + Sbjct: 115 FLKSQG----IEVVTQVLENEARAL 135 >gi|95929567|ref|ZP_01312309.1| riboflavin biosynthesis protein RibD [Desulfuromonas acetoxidans DSM 684] gi|95134264|gb|EAT15921.1| riboflavin biosynthesis protein RibD [Desulfuromonas acetoxidans DSM 684] Length = 364 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 21/147 (14%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL+ A+ A R PVGAV V + +++ R + HAE+ A+R Sbjct: 1 MQIALDLARKALGRTTPNPPVGAVIVRDGQVVGRGFHPKAGE----PHAEVFALRDAA-- 54 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + D YVTLEPC C A+ A + R++ G +P G + Sbjct: 55 ---DQARGADAYVTLEPCSHHGRTPPCCEALIAAGVSRVFVGLIDPNPQVSGQGVERLRA 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ G+ E + R++I F K Sbjct: 112 AG----VEVEVGVLETQCRRLIAPFIK 134 >gi|281357052|ref|ZP_06243542.1| riboflavin biosynthesis protein RibD [Victivallis vadensis ATCC BAA-548] gi|281316610|gb|EFB00634.1| riboflavin biosynthesis protein RibD [Victivallis vadensis ATCC BAA-548] Length = 346 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 42/151 (27%), Positives = 57/151 (37%), Gaps = 18/151 (11%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL A+ P VGAV V + +II R + HAEI A+ Sbjct: 8 DQKFMLEALALARMGWGLTSPNPMVGAVIVRDGEIIGRGYHCKAGE----PHAEINALID 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + +YVTLEPC C AI A I R+ G+ +P G Q Sbjct: 64 VEKH--GLDAKGATIYVTLEPCSTVGRTPACTDAIRAAGISRVVIGSLDPNPKHAGRGVQ 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A ++ G+ +I + FFK Sbjct: 122 LLEEAG----IQVTVGVERAACGEINRPFFK 148 >gi|163783070|ref|ZP_02178065.1| riboflavin specific deaminase [Hydrogenivirga sp. 128-5-R1-1] gi|159881750|gb|EDP75259.1| riboflavin specific deaminase [Hydrogenivirga sp. 128-5-R1-1] Length = 362 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 56/147 (38%), Gaps = 21/147 (14%) Query: 7 FMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +MS AL A + VG V V +I+ + HAE++A+ Sbjct: 6 YMSLALSLAKRRKGLTHPNPTVGCVVVNEGEIVGLGYH--EGAGHP--HAEVVALEQAGE 61 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LYVTLEPC C A+ A IR+ +P G + Sbjct: 62 KA-----KGSTLYVTLEPCTHFGRTPPCTDALIRAGIRKAVVAVKDPNPVVGGKGIERLR 116 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145 A ++ G+ E+ +R++ +DFF Sbjct: 117 EAGL----DVEVGVLEEEARELNEDFF 139 >gi|118445111|ref|YP_879181.1| riboflavin biosynthesis protein RibD [Clostridium novyi NT] gi|118135567|gb|ABK62611.1| riboflavin biosynthesis protein RibD [Clostridium novyi NT] Length = 377 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 23/150 (15%) Query: 6 VFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A+E ++ P VGAV V +NKII + + AHAE+ A++ Sbjct: 9 KFMKKAIELSKLGVGYT-YPNPLVGAVIVKDNKIIGQGYHERFGG----AHAEVNALKNA 63 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 E + +YVTLEPC CA I + I+ + G +P G Sbjct: 64 -----TEDVTGATMYVTLEPCSHYGKTPPCANTIVKSGIKEVIVGMRDPNELVAGRGINI 118 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 ++ G+ E+ ++I + F K Sbjct: 119 LKENG----IKVIVGVFEEEIKKINEIFIK 144 >gi|296166409|ref|ZP_06848841.1| possible guanine deaminase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898170|gb|EFG77744.1| possible guanine deaminase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 166 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 44/94 (46%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F +E A+ P V V + ++++ + N + D TAHAEILAIR C L Sbjct: 4 FARRTIELARRNVADGGRPFATVIVNDGEVLAESANMVAQANDPTAHAEILAIREACMKL 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E L + +Y+ PC MC ++ + + + Sbjct: 64 GTEHLVDSTVYLMAHPCPMCLGSLYYCSPKEVIF 97 >gi|254392686|ref|ZP_05007860.1| guanine deaminase [Streptomyces clavuligerus ATCC 27064] gi|326439435|ref|ZP_08214169.1| Guanine deaminase [Streptomyces clavuligerus ATCC 27064] gi|197706347|gb|EDY52159.1| guanine deaminase [Streptomyces clavuligerus ATCC 27064] Length = 187 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 31/134 (23%) Query: 1 MKKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M K FM+ A A + + P GAV N++I++R NR D TAH E+ AI Sbjct: 1 MAKRKKFMAEAARLATESVVNGWGGPFGAVITKNDEIVARGQNRVLLTGDPTAHGEVEAI 60 Query: 60 RMGCRILSQE------------------------------ILPEVDLYVTLEPCTMCAAA 89 R ++L+ +L ++Y + PC MC +A Sbjct: 61 RKAIQVLNPWAPSIPETHQNTSTLKLIRAEPSDLLPKRARMLKGCEIYTSGAPCPMCMSA 120 Query: 90 ISLARIRRLYYGAS 103 I +R +Y+ Sbjct: 121 IYWSRCDAVYFSCD 134 >gi|154686573|ref|YP_001421734.1| hypothetical protein RBAM_021420 [Bacillus amyloliquefaciens FZB42] gi|154352424|gb|ABS74503.1| RibD [Bacillus amyloliquefaciens FZB42] Length = 371 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 25/150 (16%) Query: 5 NVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ A+E A+ + P VGAV V N +I+ + AHAE+ AI Sbjct: 3 EYYMNTAIELARRG--EGQTQSNPLVGAVVVKNGQIVGMGAHLQYGE----AHAEVHAIH 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M R DLYVTLEPC CA I + I+R++ +P G Sbjct: 57 MAGRHA-----KGADLYVTLEPCSHYGKTPPCAELIIKSGIKRVFIAVKDPNPLVAGKGI 111 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ Q++ ++ + F Sbjct: 112 GMLEAAG----IEVKTGLLRQQAEELNKMF 137 >gi|331681807|ref|ZP_08382440.1| riboflavin biosynthesis protein RibD [Escherichia coli H299] gi|331081009|gb|EGI52174.1| riboflavin biosynthesis protein RibD [Escherichia coli H299] Length = 367 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ + HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|293392571|ref|ZP_06636891.1| riboflavin biosynthesis protein RibD [Serratia odorifera DSM 4582] gi|291424973|gb|EFE98182.1| riboflavin biosynthesis protein RibD [Serratia odorifera DSM 4582] Length = 370 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 56/157 (35%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M ++M+ A E A+ P VG V V + +I+ + HAE+ A Sbjct: 1 MHNDELYMARAFELARLGRFTTAPNPNVGCVIVRDGQIVGEGYHLRAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM + YVTLEPC CA A+ A + R+ +P Sbjct: 57 LRMAGK-----RARGATAYVTLEPCSHHGRTPPCADALIDAGVSRVVAAMQDPNPQVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A E+ G+ + + F K R Sbjct: 112 GLYKLQQAG----IEVRHGLMLAEAEAVNLGFLKRMR 144 >gi|294054578|ref|YP_003548236.1| riboflavin biosynthesis protein RibD [Coraliomargarita akajimensis DSM 45221] gi|293613911|gb|ADE54066.1| riboflavin biosynthesis protein RibD [Coraliomargarita akajimensis DSM 45221] Length = 369 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 40/147 (27%), Positives = 58/147 (39%), Gaps = 20/147 (13%) Query: 2 KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M+ AL+ A VGAV V + I++ + HAEI A+ Sbjct: 6 SEHEFYMARALKLAAQGWGTTHPNPMVGAVIVEDGAIVAEGWHT--AAGQP--HAEIEAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 R + + LYVTLEPC+ C AI A I+ + GA++P NG Sbjct: 62 AALGRAPA----SDAVLYVTLEPCSTSGRTGACTDAILRAGIQNVVIGATDPNPDHAGNG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQI 140 A H + GI EQ + Sbjct: 118 LDLLREAGVH----VQAGILEQECDDL 140 >gi|145223166|ref|YP_001133844.1| CMP/dCMP deaminase, zinc-binding [Mycobacterium gilvum PYR-GCK] gi|145215652|gb|ABP45056.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium gilvum PYR-GCK] Length = 146 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 55/140 (39%), Gaps = 13/140 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A+EEA+ IP+GA + ++ NR +L D + HAE A R R Sbjct: 7 LDVAVEEARKGLAEGGIPIGAALFAADGTLLGSGHNRRVQLDDPSLHAETDAFRNAGRQR 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + TL PC C+ + I + G S GG + + H Sbjct: 67 G---YRSTTMVTTLSPCWYCSGLVRQFNIGTVVIGESRTFTGGHDWLAE--------HGV 115 Query: 127 EIYPGISEQRSRQIIQDFFK 146 ++ + ++R +++DF Sbjct: 116 KVTV-VDDERCVTLMRDFIA 134 >gi|153954787|ref|YP_001395552.1| hypothetical protein CKL_2169 [Clostridium kluyveri DSM 555] gi|219855247|ref|YP_002472369.1| hypothetical protein CKR_1904 [Clostridium kluyveri NBRC 12016] gi|146347645|gb|EDK34181.1| RibD [Clostridium kluyveri DSM 555] gi|219568971|dbj|BAH06955.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 369 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 59/153 (38%), Gaps = 21/153 (13%) Query: 2 KKGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 K +M ALE A N P VGA+ V I+ R ++ HAE+ A+ Sbjct: 5 NKDEHYMEIALELASKGEGFVNPNPQVGALVVKEGNIVGRGYHKFYGG----PHAEVYAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + +YVTLEPC C AI A I+++ +P G Sbjct: 61 KEAGDKA-----AGGQIYVTLEPCSHYGKTPPCVEAIVRAGIKKVVVALKDPNPLVSGRG 115 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 +F + E+ G+ E+ + I + F K Sbjct: 116 IEFLR----NKGIEVVTGVLEKEALNINEIFIK 144 >gi|301022597|ref|ZP_07186469.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 69-1] gi|300397478|gb|EFJ81016.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 69-1] Length = 367 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ + HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|147678096|ref|YP_001212311.1| pyrimidine reductase and pyrimidine deaminase [Pelotomaculum thermopropionicum SI] gi|146274193|dbj|BAF59942.1| pyrimidine reductase and Pyrimidine deaminase [Pelotomaculum thermopropionicum SI] Length = 376 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ ALE A A R P VGAV V N ++ + + K T HAEI+A++ Sbjct: 2 DDRYYMNMALELAARARGRTSPNPMVGAVLVKNGVVVGQGYHM----KAGTPHAEIIALK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 LYV LEPC CA A+ A + R+ ++P G Sbjct: 58 EAGNEA-----RGATLYVNLEPCCHYGRTGPCADAVIEAGVARVVAAMADPNPLVAGGGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + A E+ G+ E +R++ + F K Sbjct: 113 KKIKEAGL----EVTLGVMEDEARELNEAFIK 140 >gi|325498303|gb|EGC96162.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia fergusonii ECD227] Length = 367 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ + HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|229592849|ref|YP_002874968.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens SBW25] gi|229364715|emb|CAY52681.1| riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase] [Pseudomonas fluorescens SBW25] Length = 369 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ VG V V + +++ + HAE+ A+R Sbjct: 3 DAHYMARALELARKGLYTTHPNPRVGCVIVRDGQVVGEGWHVRTGE----PHAEVHALRA 58 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ A + R+ +P G Q Sbjct: 59 AGDKA-----RGATAYVTLEPCSHYGHTPPCADALVSAGLARVVAAMQDPNPEVAGRGMQ 113 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A ++ G+ E +R + + F K Sbjct: 114 RLAQAG----IDVRSGVLESEARALNRGFLKR 141 >gi|282877095|ref|ZP_06285937.1| riboflavin biosynthesis protein RibD [Prevotella buccalis ATCC 35310] gi|281300777|gb|EFA93104.1| riboflavin biosynthesis protein RibD [Prevotella buccalis ATCC 35310] Length = 326 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 17/149 (11%) Query: 4 GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++M L+ A+ A + VGAV V +I+ + AHAE+ A Sbjct: 7 DKMYMRRCLQLAKQGRALAKPNPMVGAVIVYQGRILGEGYHVRCGQ----AHAEVNAF-A 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 R + +LP+ LYV+LEPC CA I ++R+ G +P G Q Sbjct: 62 SVRPADEPLLPQSTLYVSLEPCCHTGKTPPCADLIIRKHVKRVVCGCIDPFAQVHGRGVQ 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ ++ R + + F Sbjct: 122 KLRDAG----IDVTVGVLDEECRALNRQF 146 >gi|168210245|ref|ZP_02635870.1| riboflavin biosynthesis protein RibD [Clostridium perfringens B str. ATCC 3626] gi|170711633|gb|EDT23815.1| riboflavin biosynthesis protein RibD [Clostridium perfringens B str. ATCC 3626] Length = 365 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM ALE A+ N P VGAV V +II + + HAEI +I Sbjct: 2 DEFFMKKALELARKGEGYVNPNPLVGAVIVKGGEIIGQGYHEFFGGN----HAEINSINS 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + +YVTLEPC C AI +++R+ G +P + Sbjct: 58 SIKST-----EGATIYVTLEPCCHYGKTPPCVEAIIKNKLKRVVVGTLDPNPLVSGKSIK 112 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + E+ G+ E+ ++ + F Sbjct: 113 ILRESG----IEVKVGVLEKECIRLNEIF 137 >gi|238765182|ref|ZP_04626114.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia kristensenii ATCC 33638] gi|238696616|gb|EEP89401.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia kristensenii ATCC 33638] Length = 369 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 57/157 (36%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ +M+ A E A+ + P VG V V + +I+ + HAE+ A Sbjct: 1 MQPDEFYMARAFELARLGRFTTSPNPNVGCVVVRDGEIVGEGYHLRAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM YVTLEPC CA A+ A ++R+ +P Sbjct: 57 LRMAGEKA-----RGATAYVTLEPCSHHGRTPPCADALLTAGVKRVVAAMQDPNPQVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A E+ G+ + + F K R Sbjct: 112 GLYKLKQAG----VEVDHGLMLAEAEAVNLGFLKRMR 144 >gi|87121732|ref|ZP_01077619.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase, C-terminal [Marinomonas sp. MED121] gi|86162983|gb|EAQ64261.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase, C-terminal [Marinomonas sp. MED121] Length = 383 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 55/153 (35%), Gaps = 21/153 (13%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ A++ A+ VG V V +N +++ ++ HAE+ AI Sbjct: 8 NHEYWMAQAIQLARKGLYTTHPNPRVGCVLVRDNSLVAEGYHKVAGEG----HAEVNAIA 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC+ CA A+ A + RL YG +P G Sbjct: 64 NA-----NGDTQGCTAYVTLEPCSHQGKTGPCAKALIKANVSRLVYGMQDPNPDVAGRGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ + E + + F K Sbjct: 119 AMLKEAG----IEVIGPVMETEALALNPGFIKR 147 >gi|332160725|ref|YP_004297302.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664955|gb|ADZ41599.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 369 Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 57/157 (36%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ +M+ A E A+ + P VG V V + +I+ + HAE+ A Sbjct: 1 MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM YVTLEPC CA A+ A ++R+ +P Sbjct: 57 LRMAGEKA-----RGATAYVTLEPCSHHGRTPPCADALLTAGVKRVVAAMQDPNPQVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A E+ G+ + + F K R Sbjct: 112 GLYKLKQAG----VEVDHGLMLAEAEAVNLGFLKRMR 144 >gi|292487445|ref|YP_003530317.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Erwinia amylovora CFBP1430] gi|292898687|ref|YP_003538056.1| riboflavin biosynthesis protein RibD [Erwinia amylovora ATCC 49946] gi|291198535|emb|CBJ45643.1| riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase] [Erwinia amylovora ATCC 49946] gi|291552864|emb|CBA19909.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Erwinia amylovora CFBP1430] Length = 367 Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ P VG V V +++I+ + HAE+ A+RM Sbjct: 3 DEAYMARALELARRGRFTTTPNPNVGCVLVRDDQIVGEGYHMRAGE----PHAEVHALRM 58 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC C A+ A ++R+ +P G Sbjct: 59 AGEKS-----RGATAYVTLEPCSHHGRTPPCCEALIAAGVKRVVTAMQDPNPQVAGRGLY 113 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ + + + F K R Sbjct: 114 RLQQAG----IEVSHGLMMPEAEALNRGFLKRMR 143 >gi|282857766|ref|ZP_06266975.1| riboflavin biosynthesis protein RibD [Pyramidobacter piscolens W5455] gi|282584436|gb|EFB89795.1| riboflavin biosynthesis protein RibD [Pyramidobacter piscolens W5455] Length = 364 Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 58/158 (36%), Gaps = 25/158 (15%) Query: 3 KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M AL+ A + P VG V V + +++ R + + HAE A+ Sbjct: 6 TDEHHMRQALDLALRGLGKT-TPNPMVGCVIVKDGEVVGRGWHDHLGGL----HAEAAAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R +YVTLEPC CA A+ + + R +P G Sbjct: 61 RDAGDKA-----RGATVYVTLEPCSHQGRQPPCAPALVKSGVTRCVCAVGDPNPKVSGRG 115 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF--KERR 149 + + A E G+ E+ + + + FF + RR Sbjct: 116 LKILSDAG----VETVCGVLEKEASWLNRGFFSLQTRR 149 >gi|218703696|ref|YP_002411215.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli UMN026] gi|293403533|ref|ZP_06647624.1| ribD [Escherichia coli FVEC1412] gi|298379145|ref|ZP_06989026.1| ribD [Escherichia coli FVEC1302] gi|300900480|ref|ZP_07118647.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 198-1] gi|218430793|emb|CAR11667.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli UMN026] gi|291429386|gb|EFF02406.1| ribD [Escherichia coli FVEC1412] gi|298280258|gb|EFI21762.1| ribD [Escherichia coli FVEC1302] gi|300355961|gb|EFJ71831.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 198-1] Length = 367 Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ + HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|253581821|ref|ZP_04859045.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium varium ATCC 27725] gi|251836170|gb|EES64707.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium varium ATCC 27725] Length = 358 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 59/153 (38%), Gaps = 25/153 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M ALE A A + P VGAV V + KI+ ++ HAE+ A+ Sbjct: 2 DKKYMERALELA--ALGEGYVNPNPMVGAVVVKDGKIVGEGYHKKYGG----PHAEVFAL 55 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 +YVTLEPC CA I I+R + +P G Sbjct: 56 EEAGEKA-----EGATIYVTLEPCSHYGKTPPCAKKIIDMGIKRCIIASLDPNPLVSGRG 110 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + T A E+ GI E+ + ++ + F K Sbjct: 111 IKMMTDAG----IEVVTGIMEKEALELNRVFMK 139 >gi|260438155|ref|ZP_05791971.1| riboflavin biosynthesis protein RibD [Butyrivibrio crossotus DSM 2876] gi|292809343|gb|EFF68548.1| riboflavin biosynthesis protein RibD [Butyrivibrio crossotus DSM 2876] Length = 360 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 51/151 (33%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+ A+ VGAV V + +II + HAE AI+ Sbjct: 2 TDRDYMLRAISLAKKGTGYTSPNPLVGAVIVKDGRIIGEGYHAIYGDL----HAERNAIK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 +YVTLEPC C AI A I ++ G+ +P G Sbjct: 58 NL-----TVDAKGATIYVTLEPCCHYGKQPPCTEAILAAGITKVVIGSRDPNPLVSGRGA 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 F H E+ + ++ FF Sbjct: 113 DFLRS----HGIEVIEDFMREECDELNPIFF 139 >gi|300721779|ref|YP_003711057.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Xenorhabdus nematophila ATCC 19061] gi|297628274|emb|CBJ88835.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase [Xenorhabdus nematophila ATCC 19061] Length = 369 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 57/157 (36%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M ++MS ALE A + P VG V V + +I+ + HAE+ A Sbjct: 2 MTLDEIYMSRALELAYQGRFTTSPNPNVGCVIVKDEEIVGEGFHLRAGE----PHAEVHA 57 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM YVTLEPC CA A+ A + R+ +P Sbjct: 58 LRMAGEKA-----KGATAYVTLEPCSHHGKTPPCADALIAAGLSRVVVAMQDPNPQVAGR 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A + G+ ++ + + F K R Sbjct: 113 GLYKLQQAG----IAVEHGLMMDQAESLNKGFLKRMR 145 >gi|289523035|ref|ZP_06439889.1| riboflavin biosynthesis protein RibD [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503578|gb|EFD24742.1| riboflavin biosynthesis protein RibD [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 365 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 21/153 (13%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ +M L A+ R P VG V V ++KI+ +R + HAE++A+ Sbjct: 9 RQNEYYMRIVLSLARRGTGRTSPNPRVGCVVVKDDKIVGTGFHR----CPGSPHAEVMAL 64 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 M + LYV LEPC CA I I+R++ +P G Sbjct: 65 SMAKDMS-----RGATLYVNLEPCIHYGRTPPCAPLIVERGIKRVFISTEDPFPKVRGRG 119 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 ++ H E+ G+ +R + + F K Sbjct: 120 VEYLRS----HGVEVVSGVLSDEARWLNRGFLK 148 >gi|260665250|ref|ZP_05866099.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii SJ-7A-US] gi|313472797|ref|ZP_07813285.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 1153] gi|260560987|gb|EEX26962.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii SJ-7A-US] gi|313448878|gb|EEQ68026.2| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 1153] Length = 352 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 20/150 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 MK FM AL EA VGAV V +N++++ + HAE A Sbjct: 2 MKTDEDFMGLALTEASKGRYHTWTNPMVGAVVVKDNQVLATGYHHRYGD----VHAERDA 57 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I L+ E L LYVTLEPC C+ I ++I+R+ +P Sbjct: 58 I----SKLTPEQLFNSTLYVTLEPCNHTGKQPPCSDLIIASKIKRVVISEIDPHSLVTGK 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 G + H+ + G+ Q ++++ Q Sbjct: 114 GIKKLKA----HNISVTTGVLAQEAKKLNQ 139 >gi|256421680|ref|YP_003122333.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588] gi|256036588|gb|ACU60132.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588] Length = 131 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 2/115 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M+ + A AA E PVG+V V + II ++++ KD+T HAE++AI R + Sbjct: 1 MARCYQLADIAAKEGESPVGSVIVKDGIIIGEGSEKSKQQKDITRHAEVVAILDALR--N 58 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + L LY +EPC +C+ I +I + + + + GG T Sbjct: 59 TDSLAGSVLYTNVEPCLLCSYVIRHYKIAEVVFARHSGELGGTHQPFDLLTSPDF 113 >gi|238855788|ref|ZP_04646080.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 269-3] gi|282934748|ref|ZP_06339990.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 208-1] gi|238831564|gb|EEQ23909.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 269-3] gi|281301189|gb|EFA93491.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 208-1] Length = 359 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 20/150 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 MK FM AL EA VGAV V +N++++ + HAE A Sbjct: 9 MKTDEDFMGLALTEASKGRYHTWTNPMVGAVVVKDNQVLATGYHHRYGD----VHAERDA 64 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I L+ E L LYVTLEPC C+ I ++I+R+ +P Sbjct: 65 I----SKLTPEQLFNSTLYVTLEPCNHTGKQPPCSDLIIASKIKRVVISEIDPHSLVTGK 120 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 G + H+ + G+ Q ++++ Q Sbjct: 121 GIKKLKA----HNISVTTGVLAQEAKKLNQ 146 >gi|317509467|ref|ZP_07967084.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Segniliparus rugosus ATCC BAA-974] gi|316252241|gb|EFV11694.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Segniliparus rugosus ATCC BAA-974] Length = 167 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 44/94 (46%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ ++ A+ P V V + +I++ + N+ + D TAHAEILAIR C L Sbjct: 3 FIQRTVDLARQNVAEGGRPFATVIVRDGEILAESANKVAQTGDPTAHAEILAIREACAKL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E L +YV PC MC ++ + + Sbjct: 63 GTEHLVGATIYVLAHPCPMCLGSLYYCSPDEVVF 96 >gi|311280696|ref|YP_003942927.1| riboflavin biosynthesis protein RibD [Enterobacter cloacae SCF1] gi|308749891|gb|ADO49643.1| riboflavin biosynthesis protein RibD [Enterobacter cloacae SCF1] Length = 368 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 55/155 (35%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + V+M+ AL+ AQ VG V V + I+ + HAE+ A+R Sbjct: 2 QDEVYMARALKLAQRGRFTTHPNPRVGCVIVRDGDIVGEGFHLRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGDKA-----RGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----VEVSHGLMMSEAEQLNKGFLKRMR 143 >gi|294498727|ref|YP_003562427.1| riboflavin biosynthesis protein RibD [Bacillus megaterium QM B1551] gi|294348664|gb|ADE68993.1| riboflavin biosynthesis protein RibD [Bacillus megaterium QM B1551] Length = 363 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 21/152 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M+ AL+ A+ + P VG+V V +N+I+ + HAEI A Sbjct: 1 MINHEFYMNIALQNAKATKGQTDPNPLVGSVIVNDNRIVGIGTHLKAGE----PHAEIHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 +RM E YVTLEPC+ CA A+ A ++++ +P N Sbjct: 57 LRMAG-----EQAKGATAYVTLEPCSHHGRTGPCAEALVEAGVKKVVIATLDPNPLVAGN 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + + E+ G+ E+ SRQ+ + F Sbjct: 112 GVKILE----NAGIEVITGVCEEESRQMNEVF 139 >gi|226308791|ref|YP_002768751.1| cytosine deaminase [Rhodococcus erythropolis PR4] gi|229489217|ref|ZP_04383083.1| cytosine deaminase [Rhodococcus erythropolis SK121] gi|226187908|dbj|BAH36012.1| putative cytosine deaminase [Rhodococcus erythropolis PR4] gi|229324721|gb|EEN90476.1| cytosine deaminase [Rhodococcus erythropolis SK121] Length = 154 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 55/146 (37%), Gaps = 10/146 (6%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 F+ A+E+A+ +P+GA + ++++ NR ++ H E I Sbjct: 7 TDEYFLGLAIEQAKIGWEEGGVPIGAALIHRGEVLAVGRNRRVQMNSAIRHGETDCIERA 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R L + E LY TL PC MCA L I R+ G N E L + Sbjct: 67 GR-LPASVYRECVLYTTLSPCFMCAGTARLYEIPRIVVG-ENRSFEASEEW-----LRSS 119 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKER 148 ++ + + ++ ER Sbjct: 120 GIQVDV---VDDAECVALMDRMLAER 142 >gi|318604604|emb|CBY26102.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia enterocolitica subsp. palearctica Y11] Length = 369 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 57/157 (36%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ +M+ A E A+ + P VG V V + +I+ + HAE+ A Sbjct: 1 MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM YVTLEPC CA A+ A ++R+ +P Sbjct: 57 LRMAGEKA-----RGATAYVTLEPCSHHGRTPPCADALLTAGVKRVVAAMQDPNPQVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A E+ G+ + + F K R Sbjct: 112 GLYKLKQAG----VEVDHGLMLAEAEAVNLGFLKRMR 144 >gi|315179290|gb|ADT86204.1| zinc-binding domain protein [Vibrio furnissii NCTC 11218] Length = 158 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 14/148 (9%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 ++ + A++A R P AV V N +I+ N D+T HAE L + Sbjct: 7 DYRWLRHSFALAEDAKSRGIHPFAAVLVDANGEILLEQINGYLPDLDMTGHAERLIMTQA 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 ++ + L + LYV+ EPC MCA AI A + R+ YG S + + T Sbjct: 67 SKLYRPDFLNQCTLYVSAEPCAMCAGAIYWAGVGRVVYGLSETRLKALTG--NHPENPTL 124 Query: 123 -----------HHSPEIYPGISEQRSRQ 139 E++ + E + + Sbjct: 125 ALPCRIVFESGQRITEVHGPLLEAEAEE 152 >gi|291532792|emb|CBL05905.1| Cytosine/adenosine deaminases [Megamonas hypermegale ART12/1] Length = 158 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 1/105 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ A+E ++ + P GA+ V I+ N + + HAE + Sbjct: 2 DHLFYLRKAIEVSKKSREHGNTPFGAILVDGEGNILLEQENIEITESNCSGHAETSLMIK 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 + S++ L LY T EPC MCA AI + ++ YG S + Sbjct: 62 ASKKYSKDFLWNCTLYSTAEPCAMCAGAIYWGNVGKVVYGISEKR 106 >gi|123443368|ref|YP_001007342.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090329|emb|CAL13195.1| riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 369 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 57/157 (36%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ +M+ A E A+ + P VG V V + +I+ + HAE+ A Sbjct: 1 MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM YVTLEPC CA A+ A ++R+ +P Sbjct: 57 LRMAGEKA-----RGATAYVTLEPCSHHGRTPPCADALLTAGVKRVVAAMQDPNPQVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A E+ G+ + + F K R Sbjct: 112 GLYKLKQAG----VEVDHGLMLAEAEAVNLGFLKRMR 144 >gi|301799334|emb|CBW31869.1| riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase] [Streptococcus pneumoniae OXC141] Length = 366 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A++ AQ A N P VGA+ V +N II + + HAE A++ Sbjct: 2 SDSKYMKLAIKLAQKGAGYVNPNPMVGAIIVKDNHIIGQGYHEFFGG----PHAERNALK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR LYVTLEPC C AI + I R+ G+ + G Sbjct: 58 N-CRKSP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ GI E +I+ F Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138 >gi|168493876|ref|ZP_02718019.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae CDC3059-06] gi|169833009|ref|YP_001693699.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae Hungary19A-6] gi|168995511|gb|ACA36123.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae Hungary19A-6] gi|183576084|gb|EDT96612.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae CDC3059-06] Length = 366 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A++ AQ A N P VGA+ V +N II + + HAE A++ Sbjct: 2 SDSKYMKLAIKLAQKGAGYVNPNPMVGAIIVKDNHIIGQGYHEFFGG----PHAERNALK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR LYVTLEPC C AI + I R+ G+ + G Sbjct: 58 N-CRKSP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ GI E +I+ F Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138 >gi|149005931|ref|ZP_01829660.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae SP18-BS74] gi|168483819|ref|ZP_02708771.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae CDC1873-00] gi|225855949|ref|YP_002737460.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae P1031] gi|307126404|ref|YP_003878435.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae 670-6B] gi|147762287|gb|EDK69248.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae SP18-BS74] gi|172042835|gb|EDT50881.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae CDC1873-00] gi|225725798|gb|ACO21650.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae P1031] gi|306483466|gb|ADM90335.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae 670-6B] gi|332076629|gb|EGI87091.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae GA17545] gi|332203340|gb|EGJ17407.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae GA47368] Length = 366 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A++ AQ A N P VGA+ V +N II + + HAE A++ Sbjct: 2 SDSKYMKLAIKLAQKGAGYVNPNPMVGAIIVKDNHIIGQGYHEFFGG----PHAERNALK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR LYVTLEPC C AI + I R+ G+ + G Sbjct: 58 N-CRKSP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ GI E +I+ F Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138 >gi|148253573|ref|YP_001238158.1| putative cytidine/deoxycytidylate deaminase family protein [Bradyrhizobium sp. BTAi1] gi|146405746|gb|ABQ34252.1| Putative Cytidine/deoxycytidylate deaminase family protein [Bradyrhizobium sp. BTAi1] Length = 240 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 57/150 (38%), Gaps = 14/150 (9%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 + F+ + A+ + P AV V +++ A N +D TAHAE L Sbjct: 86 RDAHFLRHSFAVARRSMSHGNHPFAAVLVDAGGRVLIEAENGYMPARDATAHAERLVATQ 145 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C ++ +I LY + EPC MCA AI A I R+ YG S + + T Sbjct: 146 ACTSIAADIRATATLYSSAEPCAMCAGAIYWAGIGRVVYGLSERRL--RDFTGNHPENPT 203 Query: 122 CH-----------HSPEIYPGISEQRSRQI 140 + E+ + E + + Sbjct: 204 LDLPCRDVFASGQRTTEVVGPLLEDEAAAL 233 >gi|300924134|ref|ZP_07140126.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 182-1] gi|301330725|ref|ZP_07223327.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 78-1] gi|300419587|gb|EFK02898.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 182-1] gi|300843386|gb|EFK71146.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 78-1] Length = 367 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGAIAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|256020381|ref|ZP_05434246.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Shigella sp. D9] gi|332281560|ref|ZP_08393973.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase [Shigella sp. D9] gi|332103912|gb|EGJ07258.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase [Shigella sp. D9] Length = 367 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGAIAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|226951731|ref|ZP_03822195.1| riboflavin biosynthesis protein RibD [Acinetobacter sp. ATCC 27244] gi|226837521|gb|EEH69904.1| riboflavin biosynthesis protein RibD [Acinetobacter sp. ATCC 27244] Length = 366 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + + +M A++ A+ P VG V V + KI+ + K HAE+ A Sbjct: 9 LSQAKYWMQRAIDLARLGQYSTKPNPNVGCVIVKDGKILGEGFH----PKAGQPHAEVFA 64 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R E + YVTLEPC CA A+ A+++++ S+P Sbjct: 65 LRQAG-----ENAKDATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVIACSDPNPLVAGK 119 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G + A E+ G+ + ++ + F K Sbjct: 120 GVKILLDAG----IEVETGVCTEIAKGLNLGFLKA 150 >gi|221140247|ref|ZP_03564740.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus aureus subsp. aureus str. JKD6009] Length = 347 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%) Query: 5 NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 2 SQFMDYAIQLANMVQGQTGVNPPVGAVIVKEGRIVGIGAHLRKGDK----HAEVQALDMA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 Q+ +Y+TLEPC C I +I ++ Y + N Sbjct: 58 -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 105 Query: 117 YTLATCH-HSPEIYPGISEQRSRQIIQDFFKER 148 + T H E+ + ++R+ Q+ QDFFK + Sbjct: 106 HGDETLRAHGIEVEC-VDDERASQLYQDFFKAK 137 >gi|324114633|gb|EGC08601.1| riboflavin biosynthesis protein RibD [Escherichia fergusonii B253] Length = 367 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ + HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGE----PHAEVYALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|294810932|ref|ZP_06769575.1| Cytosine/adenosine deaminase [Streptomyces clavuligerus ATCC 27064] gi|294323531|gb|EFG05174.1| Cytosine/adenosine deaminase [Streptomyces clavuligerus ATCC 27064] Length = 206 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 31/134 (23%) Query: 1 MKKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M K FM+ A A + + P GAV N++I++R NR D TAH E+ AI Sbjct: 20 MAKRKKFMAEAARLATESVVNGWGGPFGAVITKNDEIVARGQNRVLLTGDPTAHGEVEAI 79 Query: 60 RMGCRILSQE------------------------------ILPEVDLYVTLEPCTMCAAA 89 R ++L+ +L ++Y + PC MC +A Sbjct: 80 RKAIQVLNPWAPSIPETHQNTSTLKLIRAEPSDLLPKRARMLKGCEIYTSGAPCPMCMSA 139 Query: 90 ISLARIRRLYYGAS 103 I +R +Y+ Sbjct: 140 IYWSRCDAVYFSCD 153 >gi|297192826|ref|ZP_06910224.1| cytidine/deoxycytidine deaminase [Streptomyces pristinaespiralis ATCC 25486] gi|197722375|gb|EDY66283.1| cytidine/deoxycytidine deaminase [Streptomyces pristinaespiralis ATCC 25486] Length = 149 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 17/148 (11%) Query: 1 MKKGNV--FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57 M + +++ A+ EA+ IP+GA + ++ R NR + D +AHAE Sbjct: 1 MAQDRYGTWLATAVAEARAGLAEGGIPIGAALYGADGTLLGRGHNRRVQDGDPSAHAETE 60 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 A R R S + TL PC C+ + I R+ G + GG + Sbjct: 61 AFRAAGRQRS---YRGTTMVTTLSPCWYCSGLVRQFGISRVVIGETETFHGG----HDWL 113 Query: 118 TLATCHHSPEIYPGISEQ-RSRQIIQDF 144 EI + + R +++DF Sbjct: 114 AANG----VEIV--LLDDPACRSMMRDF 135 >gi|307244664|ref|ZP_07526768.1| riboflavin biosynthesis protein RibD [Peptostreptococcus stomatis DSM 17678] gi|306492045|gb|EFM64094.1| riboflavin biosynthesis protein RibD [Peptostreptococcus stomatis DSM 17678] Length = 372 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 18/148 (12%) Query: 5 NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +MS A+E A+ A VGAV V + +++ + + HAE A++ Sbjct: 3 EKYMSMAIELAKKACGYTNPNPMVGAVIVKDGQVLGKGYH----TWCGCLHAEREALKD- 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 C+ + +YVTLEPC C AI I ++ G+ +P G Q Sbjct: 58 CQSRGVTV-TGATMYVTLEPCCHYGKTPPCTEAIIENGIAKVVVGSLDPNPKVAGKGIQI 116 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 H + G+ E+ + + F Sbjct: 117 LKD----HGINVVTGVMEKECDDLNEVF 140 >gi|254518952|ref|ZP_05131008.1| cytidine/deoxycytidylate deaminase [Clostridium sp. 7_2_43FAA] gi|226912701|gb|EEH97902.1| cytidine/deoxycytidylate deaminase [Clostridium sp. 7_2_43FAA] Length = 160 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 1/104 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 K ++ +E ++ + +P G + V + II N T HAE + Sbjct: 3 KDHIYYLRKCVEVSKRSRESGNMPFGCILVDKDGNIILEQMNIEGTDYKCTGHAETQLME 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 S+ L + LY T EPC MC AI + R+ YG S Sbjct: 63 KASMKYSKSFLWDCTLYSTAEPCAMCTGAIYWGNVGRIVYGLSE 106 >gi|332827503|gb|EGK00249.1| riboflavin biosynthesis protein RibD [Dysgonomonas gadei ATCC BAA-286] Length = 355 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 19/153 (12%) Query: 1 MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M L+ AQ VGAV V KII +R AHAE+ A Sbjct: 1 MTVEEKYMYRCLQLAQNGRGFTSPNPMVGAVIVHQGKIIGEGYHRQYGK----AHAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + + +L + +YV+LEPC CA I +I ++ +P Sbjct: 57 VNS---VKDKALLKDSTIYVSLEPCSHHGKTPPCAQLIIDNQIPKVVVACLDPYPAVSGR 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + E+ G+ E+ ++ + + FF Sbjct: 114 GIKMLQDRG----IEVSVGVLEKEAQALNRVFF 142 >gi|225159038|ref|ZP_03725347.1| riboflavin biosynthesis protein RibD [Opitutaceae bacterium TAV2] gi|224802351|gb|EEG20614.1| riboflavin biosynthesis protein RibD [Opitutaceae bacterium TAV2] Length = 388 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 41/147 (27%), Positives = 59/147 (40%), Gaps = 22/147 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + FM AL A+ A P VGA+ V + +++ + D HAE +A+ Sbjct: 7 RHECFMWQALALARRAWGNT-HPNPMVGAIIVEDGAVVAEGWHAR----DGGPHAERVAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 R P LYVTLEPC+ C AI A IRR+ GA++P G Sbjct: 62 TALGRAPK----PGATLYVTLEPCSTHGRTGACCDAIIEAGIRRVVVGATDPNPDHAGAG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQI 140 A E+ G+ E+ + Sbjct: 118 YARLRAAG----VEVITGVRERECADL 140 >gi|307105321|gb|EFN53571.1| hypothetical protein CHLNCDRAFT_13956 [Chlorella variabilis] Length = 131 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%) Query: 26 VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 GAV V +++ N+ D T H E+ AIR C LP LY + +PC Sbjct: 6 FGAVIVDKETGEVVGEGYNKVILHNDPTWHGEMEAIRKACAKRGSPHLPGTVLYTSAQPC 65 Query: 84 TMCAAAISLARIRRLYYGAS 103 MC+ AI AR+ +YYGA+ Sbjct: 66 PMCSTAIMWARVDHVYYGAT 85 >gi|58616834|ref|YP_196033.1| riboflavin biosynthesis protein ribD [Ehrlichia ruminantium str. Gardel] gi|58416446|emb|CAI27559.1| Riboflavin biosynthesis protein ribD [Ehrlichia ruminantium str. Gardel] Length = 370 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 25/152 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 FMS AL A+ + P VG + V + ++ R + HAEI+A+ Sbjct: 10 DKKFMSLALRLARRGL--GNVFPNPAVGCIIVNDGVVVGRGWTQVGGR----PHAEIVAL 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 + YVTLEPC+ C + A I+R+ ++P NG Sbjct: 64 DNVKHLA-----KGATAYVTLEPCSHYGKTGPCVLNLINAGIKRVVIAINDPDMRVSGNG 118 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A E+ G+ + +R + FF Sbjct: 119 IKLLRDAN----VEVRCGVMDNEARALNIGFF 146 >gi|260593448|ref|ZP_05858906.1| riboflavin biosynthesis protein RibD [Prevotella veroralis F0319] gi|260534564|gb|EEX17181.1| riboflavin biosynthesis protein RibD [Prevotella veroralis F0319] Length = 331 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 59/156 (37%), Gaps = 21/156 (13%) Query: 1 MKK---GNVFMSCALEEAQNA-ALRNEIP-VGAVAV-LNNKIISRAGNRNRELKDVTAHA 54 MK+ +M L+ A N P VGAV V +II + HA Sbjct: 6 MKQADIDEKYMRRCLQLAYNGMLKAKPNPMVGAVIVSKEGRIIGEGYHVQCGKG----HA 61 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108 E+ A + + +L + LYV+LEPC CA I + R+ G +P Sbjct: 62 EVNAF-ASVKEVDSHLLHDATLYVSLEPCSHYGKTPPCADLIIRKGVHRVVCGCIDPFAE 120 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ E+ ++ + F Sbjct: 121 VHGRGVQKLRDAG----IEVTVGVLEKECLELNKRF 152 >gi|261867792|ref|YP_003255714.1| riboflavin biosynthesis protein RibD [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413124|gb|ACX82495.1| riboflavin biosynthesis protein RibD [Aggregatibacter actinomycetemcomitans D11S-1] Length = 374 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 40/159 (25%), Positives = 62/159 (38%), Gaps = 29/159 (18%) Query: 3 KGNVFMSCALEEAQNAALRNE---IP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 + FM AL+ A+ + E P VG V V N KI+ + + HAE+ Sbjct: 8 QDVAFMQLALDLAK----QGEFTTTPNPSVGCVLVKNGKIVGKGFHFKAGE----PHAEV 59 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 +A+R E YVTLEPC CA + A + ++ +P Sbjct: 60 MALREAG-----ENARGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVA 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G Q A + G+ E+++ Q+ + F K R Sbjct: 115 GKGLQILADAGIQSAV----GLLEEKAEQLNKGFLKRMR 149 >gi|283471035|emb|CAQ50246.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus ST398] Length = 347 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%) Query: 5 NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 2 SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 Q+ +Y+TLEPC C I +I ++ Y + N Sbjct: 58 -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 105 Query: 117 YTLATC-HHSPEIYPGISEQRSRQIIQDFFKER 148 + T H E+ + ++R+ Q+ QDFFK + Sbjct: 106 HGDETLRDHGIEVEC-VDDERASQLYQDFFKAK 137 >gi|282917028|ref|ZP_06324786.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus D139] gi|283770846|ref|ZP_06343738.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus H19] gi|282319515|gb|EFB49867.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus D139] gi|283460993|gb|EFC08083.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus H19] Length = 347 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%) Query: 5 NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 2 SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 Q+ +Y+TLEPC C I +I ++ Y + N Sbjct: 58 -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 105 Query: 117 YTLATC-HHSPEIYPGISEQRSRQIIQDFFKER 148 + T H E+ + ++R+ Q+ QDFFK + Sbjct: 106 HGDETLRDHGIEVEC-VDDERASQLYQDFFKAK 137 >gi|169827319|ref|YP_001697477.1| riboflavin biosynthesis protein ribD [Lysinibacillus sphaericus C3-41] gi|168991807|gb|ACA39347.1| Riboflavin biosynthesis protein ribD [Lysinibacillus sphaericus C3-41] Length = 375 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 25/153 (16%) Query: 2 KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 K +M AL+ A A+ + P VGAV V N+ I+ +R HAE+ Sbjct: 8 TKDEKYMQLALDLA--ASAKGNTNPNPLVGAVIVKNDIIVGTGLHRKAGE----PHAEVH 61 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A RM LYVTLEPC CA + + + R+ +P Sbjct: 62 AFRMAGEHAQN-----ATLYVTLEPCSHFGKTPPCANLVKDSGVSRVVVAMQDPNPTVAG 116 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A + G+ EQ++R++ + F Sbjct: 117 RGIQLLRDAG----ITVEVGVLEQQARRLNERF 145 >gi|291086763|ref|ZP_06344381.2| riboflavin biosynthesis protein RibD [Clostridium sp. M62/1] gi|291076874|gb|EFE14238.1| riboflavin biosynthesis protein RibD [Clostridium sp. M62/1] Length = 383 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 60/150 (40%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A++ A+ A N P VGAV V +N+II + + HAE A++ Sbjct: 19 SDTEYMKLAIKLAKKGAGYVNPNPMVGAVIVKDNRIIGQGYHEIFGGL----HAERNALK 74 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR LYVTLEPC C AI + I R+ G + G Sbjct: 75 N-CRESP----VGATLYVTLEPCCHYGKTPPCTEAIIKSGITRVVVGTLDCNPIVSGKGV 129 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ GI E +Q+I+ F Sbjct: 130 KVLEENN----IQVVIGILEMECQQLIKVF 155 >gi|196037929|ref|ZP_03105239.1| riboflavin biosynthesis protein RibD [Bacillus cereus NVH0597-99] gi|196031199|gb|EDX69796.1| riboflavin biosynthesis protein RibD [Bacillus cereus NVH0597-99] Length = 367 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 23/153 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M + ++M ALE A A P VG+V V +N+I+ + HAEI Sbjct: 1 MLEHELYMKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGE----PHAEIH 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 AIRM E +YVTLEPC+ CA AI A I+++ +P Sbjct: 56 AIRMAG-----EQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSG 110 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ E++S+++ + F Sbjct: 111 RGIKILQDAG----IEVLVGVCEEKSKKMNEVF 139 >gi|322830058|gb|EFZ33221.1| deaminase, putative [Trypanosoma cruzi] Length = 333 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 31/157 (19%) Query: 22 NEIPVGAVAV------------------------LNNKIISRAGNRNRELKDVTAHAEIL 57 E+PVG V V L N I +R N + AHAE + Sbjct: 162 GEVPVGCVLVPAEASCPANAGRLDDNNPNNSGASLGNLIAARGRNATNKEHHALAHAEFV 221 Query: 58 A----IRMGCRILSQE--ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 A +R + L LYV +EPC MCAA + RI+++Y+G NP+ GG Sbjct: 222 AVEALLRDAAEKGRKPPASLAGYVLYVVVEPCIMCAAMLLYNRIKKVYFGCGNPRFGGNG 281 Query: 112 NGTQFYTLATCH-HSPEIYPGISEQRSRQIIQDFFKE 147 + + + E G + + ++Q+F+ Sbjct: 282 TVLAVHAAKSTSAPAYESCGGHRAEEAITLLQEFYSR 318 >gi|82751356|ref|YP_417097.1| riboflavin specific deaminase [Staphylococcus aureus RF122] gi|82656887|emb|CAI81317.1| riboflavin specific deaminase [Staphylococcus aureus RF122] Length = 347 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%) Query: 5 NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 2 SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 Q+ +Y+TLEPC C I +I ++ Y + N Sbjct: 58 -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 105 Query: 117 YTLATC-HHSPEIYPGISEQRSRQIIQDFFKER 148 + T H E+ + ++R+ Q+ QDFFK + Sbjct: 106 HGDDTLRDHGIEVEC-VDDERASQLYQDFFKAK 137 >gi|318058022|ref|ZP_07976745.1| zinc-binding protein [Streptomyces sp. SA3_actG] gi|318076299|ref|ZP_07983631.1| zinc-binding protein [Streptomyces sp. SA3_actF] Length = 151 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 13/144 (9%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ ++ A+EEA+ +P+GA + ++ R NR + D ++H E A R Sbjct: 5 EQAQEWLRPAVEEARQGLAEGGVPIGAALYGADGALLGRGHNRRVQDADPSSHGETDAFR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R + + TL PC C+ I I R+ G S GG + Sbjct: 65 KAGRQRT---YRGTTMVTTLSPCWYCSGLIKQFGITRVVIGESTTFKGG----EDWLEEQ 117 Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144 EI +++ ++ +F Sbjct: 118 G----VEIIR-LTDPECVDLMTEF 136 >gi|288803443|ref|ZP_06408875.1| riboflavin biosynthesis protein RibD [Prevotella melaninogenica D18] gi|288334053|gb|EFC72496.1| riboflavin biosynthesis protein RibD [Prevotella melaninogenica D18] Length = 365 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 18/152 (11%) Query: 2 KKGNVFMSCALEEAQNA--ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58 + +M L+ A+N + VGAV V +II + HAE+ A Sbjct: 5 ETDEKYMRRCLQLARNGQLLAKPNPMVGAVIVSKEGRIIGEGYHVRCGKG----HAEVNA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + +L E +YV+LEPC CA I +RR+ G +P Sbjct: 61 FASVSKEDEA-LLREATVYVSLEPCSHYGKTPPCADLIISKGVRRVVCGCIDPFAEVQGR 119 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ E+ ++ + F Sbjct: 120 GVKKIREAG----IEVTVGVLEKECLELNKRF 147 >gi|256851712|ref|ZP_05557100.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 27-2-CHN] gi|260661570|ref|ZP_05862482.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 115-3-CHN] gi|256615670|gb|EEU20859.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 27-2-CHN] gi|260547627|gb|EEX23605.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 115-3-CHN] Length = 352 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 22/158 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K FM+ A+ A VGAV V + K+++ + HAE A Sbjct: 2 MNKDEQFMALAINSASKGRYHTWTNPMVGAVVVKDGKVLATGYHHKYGD----VHAERDA 57 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I L+ E L LYVTLEPC C+ I ++I+R+ +P G Sbjct: 58 I----SKLTPEQLFNSTLYVTLEPCNHTGKQPPCSDLIIASKIKRVVISEIDPHGLVTGK 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ--DFFKER 148 G + H+ + G+ Q ++++ + +FF E Sbjct: 114 GIKKLRS----HNISVTTGVLTQEAKKLNKHYNFFYEH 147 >gi|282933540|ref|ZP_06338910.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 208-1] gi|297205330|ref|ZP_06922726.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii JV-V16] gi|281302283|gb|EFA94515.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 208-1] gi|297149908|gb|EFH30205.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii JV-V16] Length = 351 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 22/158 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K FM+ A+ A VGAV V + K+++ + HAE A Sbjct: 1 MNKDEQFMALAINSASKGRYHTWTNPMVGAVVVKDGKVLATGYHHKYGD----VHAERDA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I L+ E L LYVTLEPC C+ I ++I+R+ +P G Sbjct: 57 I----SKLTPEQLFNSTLYVTLEPCNHTGKQPPCSDLIIASKIKRVVISEIDPHGLVTGK 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ--DFFKER 148 G + H+ + G+ Q ++++ + +FF E Sbjct: 113 GIKKLRS----HNISVTTGVLTQEAKKLNKHYNFFYEH 146 >gi|308174118|ref|YP_003920823.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus amyloliquefaciens DSM 7] gi|307606982|emb|CBI43353.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus amyloliquefaciens DSM 7] gi|328552752|gb|AEB23244.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus amyloliquefaciens TA208] gi|328912449|gb|AEB64045.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bacillus amyloliquefaciens LL3] Length = 371 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 21/148 (14%) Query: 5 NVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ A+E A+ + + P VGAV V N +I+ + AHAE+ AI M Sbjct: 3 EYYMNTAIELARRGEGQTQPNPLVGAVVVKNGQIVGMGAHLQYGE----AHAEVHAINMA 58 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 DLYVTLEPC CA I + I+R++ +P G Sbjct: 59 G-----SHAKGADLYVTLEPCSHYGKTPPCAELIMKSGIKRVFIAVEDPNPLVAGKGITM 113 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ Q++ ++ + F Sbjct: 114 LEAAG----IEVKTGLLRQQAEELNKMF 137 >gi|86142849|ref|ZP_01061288.1| riboflavin biosynthesis protein RibD [Leeuwenhoekiella blandensis MED217] gi|85830881|gb|EAQ49339.1| riboflavin biosynthesis protein RibD [Leeuwenhoekiella blandensis MED217] Length = 343 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 26/155 (16%) Query: 8 MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 MS L+ A+N P VG+V V ++II ++ + HAE+ A+ Sbjct: 1 MSRCLQLAKNGL--GNTYPNPMVGSVIVYEDRIIGEGWHQ--QAGQP--HAEVNAVNS-- 52 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + Q +L + +YV+LEPC C+ I I+++ G +P G + Sbjct: 53 -VNDQSLLDKATIYVSLEPCSHFGKTPPCSDLIIAKGIKKVVIGTVDPFAEVAGRGIKKL 111 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 A C E+ G+ EQ +Q+ + FF +++R Sbjct: 112 IDAGC----EVLVGVLEQECQQLNKRFFTFHQKKR 142 >gi|165975842|ref|YP_001651435.1| riboflavin-specific deaminase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165875943|gb|ABY68991.1| riboflavin-specific deaminase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 364 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+ A+ N P VG V V N +I++ + HAE A+ Sbjct: 2 TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAV- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +E L YVTLEPC C+ + I++++ G+S+P G Sbjct: 57 ----LHCKEDLFGATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGA 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ ++ + FF Sbjct: 113 GQLRQAG----VEVVEGLLKEECDALNPIFF 139 >gi|255535790|ref|YP_003096161.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Flavobacteriaceae bacterium 3519-10] gi|255341986|gb|ACU08099.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Flavobacteriaceae bacterium 3519-10] Length = 342 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 62/158 (39%), Gaps = 22/158 (13%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++M +E A+ A + VG+V V + +II ++ K + HAEI AI Sbjct: 2 TDELYMKRCIELAKKALGQTYPNPMVGSVIVHDGRIIGEGFHQ----KAGSPHAEINAIN 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +L + +YV+LEPC CA ++ +++ G + G Sbjct: 58 S---VKDPSLLRDSTIYVSLEPCAHFGKTPPCADKLAEIGFKKVVIGILDSHDKVNGKGK 114 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK---ERR 149 Q + E+ + + + FF ++R Sbjct: 115 QILE----NAGIEVVTDVLRNECFDLNKRFFAFQEKKR 148 >gi|327398273|ref|YP_004339142.1| CMP/dCMP deaminase zinc-binding protein [Hippea maritima DSM 10411] gi|327180902|gb|AEA33083.1| CMP/dCMP deaminase zinc-binding protein [Hippea maritima DSM 10411] Length = 183 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 16/152 (10%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 K+ M A+E A+ + P GA K++S N + K HAEI+A Sbjct: 23 KEDKEKMLFAIELAKLSIRNGGGPFGAAIFSKEGKLVSCGVNLVTKEKLSILHAEIVAFI 82 Query: 61 MGCRILSQEILPEV---DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG---- 113 M + L L E +L+ + EPC MC AI + I+R+ +GA + I Sbjct: 83 MAQKKLKTYSLSEAGYFELFSSSEPCAMCLGAILWSGIKRVVFGAYSDAARNIGFDEGPV 142 Query: 114 ----TQFYTLATCHHSPEIYPGISEQRSRQII 141 + + + G+ + ++ +++ Sbjct: 143 FEASWNYLK----NKGIIVEGGLLKDKAAEVL 170 >gi|313898762|ref|ZP_07832296.1| riboflavin biosynthesis protein RibD [Clostridium sp. HGF2] gi|319935115|ref|ZP_08009555.1| riboflavin biosynthesis protein RibD [Coprobacillus sp. 29_1] gi|312956344|gb|EFR37978.1| riboflavin biosynthesis protein RibD [Clostridium sp. HGF2] gi|319809940|gb|EFW06323.1| riboflavin biosynthesis protein RibD [Coprobacillus sp. 29_1] Length = 366 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 60/150 (40%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A++ A+ A N P VGAV V +N+II + + HAE A++ Sbjct: 2 SDTEYMKLAIKLAKKGAGYVNPNPMVGAVIVKDNRIIGQGYHEIFGGL----HAERNALK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR LYVTLEPC C AI + I R+ G + G Sbjct: 58 N-CRESP----VGATLYVTLEPCCHYGKTPPCTEAIIKSGITRVVVGTLDCNPIVSGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ GI E +Q+I+ F Sbjct: 113 KVLEENN----IQVVIGILEMECQQLIKVF 138 >gi|258424182|ref|ZP_05687064.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9635] gi|257845803|gb|EEV69835.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9635] Length = 347 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%) Query: 5 NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 2 SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 Q+ +Y+TLEPC C I +I ++ Y + N Sbjct: 58 -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLNT 105 Query: 117 YTLATC-HHSPEIYPGISEQRSRQIIQDFFKER 148 + T H E+ + ++R+ Q+ QDFFK + Sbjct: 106 HGDETLRDHGIEVEC-VDDERASQLYQDFFKAK 137 >gi|309778325|ref|ZP_07673252.1| riboflavin biosynthesis protein RibD [Erysipelotrichaceae bacterium 3_1_53] gi|308913921|gb|EFP59734.1| riboflavin biosynthesis protein RibD [Erysipelotrichaceae bacterium 3_1_53] Length = 366 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 60/150 (40%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A++ A+ A N P VGAV V +N+II + + HAE A++ Sbjct: 2 SDTEYMKLAIKLAKKGAGYVNPNPMVGAVIVKDNRIIGQGYHEIFGGL----HAERNALK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR LYVTLEPC C AI + I R+ G + G Sbjct: 58 N-CRESP----VGATLYVTLEPCCHYGKTPPCTEAIIKSGITRVVVGTLDCNPIVSGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ GI E +Q+I+ F Sbjct: 113 KVLEENN----IQVVIGILEMECQQLIKVF 138 >gi|289423250|ref|ZP_06425061.1| riboflavin biosynthesis protein RibD [Peptostreptococcus anaerobius 653-L] gi|289156350|gb|EFD05004.1| riboflavin biosynthesis protein RibD [Peptostreptococcus anaerobius 653-L] Length = 433 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 23/157 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 ++K +M AL+ A+ R + P VGAV V +++II + + HAE Sbjct: 7 LEKDQHYMKIALDLAKRGIAR--VSPNPLVGAVIVKDDQIIGKGYHEKYGGL----HAER 60 Query: 57 LAIRMG-CRILSQEIL--PEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKG 107 AI+ R ++ L +YVTLEPC C AI +I+R+ + +P Sbjct: 61 NAIKDYKNRAINDPNLTIEGATMYVTLEPCCHYGKTPPCTEAIIENKIKRVVVASLDPNP 120 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + E+ G+ + + + + F Sbjct: 121 LVAGKGVKILEEVG----IEVDIGVLKDEADRQNRIF 153 >gi|325977849|ref|YP_004287565.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177777|emb|CBZ47821.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 351 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 39/145 (26%), Positives = 59/145 (40%), Gaps = 19/145 (13%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ A+ EA+ + VGAV V N ++I+R + + HAE AI Sbjct: 2 HENYMAQAIAEAKKGFRQTYTNPLVGAVIVKNGRVIARGAHLQYGHE----HAEKNAI-- 55 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + E L LYVTLEPC C AI A I+++ G +P G + Sbjct: 56 -LYCEAPEELANSTLYVTLEPCHHTGKQPPCTQAIVEAGIKKVVVGQLDPNPLVAGKGLE 114 Query: 116 FYTLATCHHSPEIYPGISEQRSRQI 140 F E+ + E +R + Sbjct: 115 FLKSQG----IEVVTQVLENEARAL 135 >gi|256751435|ref|ZP_05492313.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter ethanolicus CCSD1] gi|256749654|gb|EEU62680.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter ethanolicus CCSD1] Length = 360 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 21/148 (14%) Query: 5 NVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ P VGAV V N KII + HAE+ A++ Sbjct: 2 EEYMKRALTLAEKGWGHTNPNPLVGAVIVKNGKIIGEGYHEYFGG----PHAEVNALKNA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 E + ++VTLEPC C I + I+R+Y +P NG + Sbjct: 58 V-----EDVKGSTMFVTLEPCSHYGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNGIKR 112 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E++ GI E+++R++ + F Sbjct: 113 LKEAG----IEVHVGIMEKKARKLNEIF 136 >gi|67078030|ref|YP_245650.1| riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific deaminase) and 5-amino-6-(5-phosphoribosylamino)uracil reductase) [Bacillus cereus E33L] gi|66970336|gb|AAY60312.1| riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific deaminase) and 5-amino-6-(5-phosphoribosylamino)uracil reductase) [Bacillus cereus E33L] Length = 367 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 23/153 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M + ++M ALE A A P VG+V V +N+I+ + HAEI Sbjct: 1 MLEHELYMKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGE----PHAEIH 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 AIRM E +YVTLEPC+ CA AI A I+++ +P Sbjct: 56 AIRMAG-----EQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSG 110 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ E++S+++ + F Sbjct: 111 RGIKILQDAG----IEVLVGVCEEKSKKMNEVF 139 >gi|226324277|ref|ZP_03799795.1| hypothetical protein COPCOM_02056 [Coprococcus comes ATCC 27758] gi|225206725|gb|EEG89079.1| hypothetical protein COPCOM_02056 [Coprococcus comes ATCC 27758] Length = 370 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 51/151 (33%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+E A+ N P VGAV V + II + HAE AI Sbjct: 2 TDEFYMRRAIELAKKGRGWTNPNPMVGAVIVKDGSIIGEGYHEKCGEL----HAERNAI- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E LYVTLEPC C AI +I R+ G+ +P G Sbjct: 57 ----ASLTESAEGATLYVTLEPCCHYGKTPPCTEAILEQKIARVVIGSRDPNPKVSGKGA 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A + + + FF Sbjct: 113 KILREAG----VRVEEDFLREECDALNPVFF 139 >gi|157092991|gb|ABV22150.1| cytidine/deoxycytidylate deaminase [Perkinsus chesapeaki] Length = 295 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 37/104 (35%), Positives = 46/104 (44%), Gaps = 3/104 (2%) Query: 2 KKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 K FM+ A A P GA V N +S N KD T HAE+ AI Sbjct: 18 KVDECFMTAACMSANAGVILCHGG-PFGASVVHNGMPVSCGHNTVLFDKDPTCHAEVNAI 76 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 R R L + L + LY T EPC MC AI + ++ +Y GA Sbjct: 77 RHAVRDLGRSELSDCVLYTTCEPCPMCWGAIMASGLKVIYVGAD 120 Score = 52.2 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 45/145 (31%), Gaps = 14/145 (9%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59 + +MS + A ++ V V +++ + +R +L D + AI Sbjct: 155 DEDEKWMS---KLASHSH---------VIVVSAAGELVGDSLSRGSDLGDALDTPMVRAI 202 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 RM L L +Y + +P A ARI L+Y Q L Sbjct: 203 RMAAMTLGTHELSGCKVYASTQPDVFSHCACLWARISELFYAEPAADESEASYERQQLAL 262 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 G + + + + Sbjct: 263 KAEDRDLTTVWGCAVDECENVFKQW 287 >gi|332703475|ref|ZP_08423563.1| riboflavin biosynthesis protein RibD [Desulfovibrio africanus str. Walvis Bay] gi|332553624|gb|EGJ50668.1| riboflavin biosynthesis protein RibD [Desulfovibrio africanus str. Walvis Bay] Length = 380 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 60/152 (39%), Gaps = 18/152 (11%) Query: 1 MKKGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +FM ALE A+ VGAV V + ++++ ++ HAE A Sbjct: 1 MTDHAIFMRRALELAERCRGFTAPNPCVGAVLVRDGQVVAEGWHKIYGG----PHAEREA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I D+YVTLEPC C AI A IRR++ G + Sbjct: 57 IADARAKGVDT--STCDMYVTLEPCSHHGKTPPCTEAILEAGIRRVFVGCKDLNPTVPGR 114 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 GT++ ++ GI EQ R I DF Sbjct: 115 GTEYL----LSKGVQVELGILEQECRDAIADF 142 >gi|325953844|ref|YP_004237504.1| riboflavin biosynthesis protein RibD [Weeksella virosa DSM 16922] gi|323436462|gb|ADX66926.1| riboflavin biosynthesis protein RibD [Weeksella virosa DSM 16922] Length = 345 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 26/161 (16%) Query: 2 KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 + +M+ L+ A N P VG+V V N II HAE+ Sbjct: 5 RTDEFYMNRCLQLAANGL--GNTYPNPFVGSVIVHNQNIIGEGFTSFYGG----PHAEVN 58 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AI + +E+LP LYVTLEPC C+ I +I R+ G +P + Sbjct: 59 AIHS---VEKKELLPSSTLYVTLEPCAHFGKTPPCSDLIIEHKIPRVVVGCLDPF--ALV 113 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 NG + T H E+ GI E+ ++ + FF +++R Sbjct: 114 NGEGINRMRT--HGIEVSVGILEKECLELNRRFFTIHQKKR 152 >gi|320142810|gb|EFW34610.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus MRSA177] Length = 357 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%) Query: 5 NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 12 SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 67 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 Q+ +Y+TLEPC C I +I ++ Y + N Sbjct: 68 -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 115 Query: 117 YTLATCH-HSPEIYPGISEQRSRQIIQDFFKER 148 + T H E+ + ++R+ Q+ QDFFK + Sbjct: 116 HGDETLRAHGIEVEC-VDDERASQLYQDFFKAK 147 >gi|282927316|ref|ZP_06334937.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9765] gi|282592080|gb|EFB97105.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9765] Length = 347 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%) Query: 5 NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 2 SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 Q+ +Y+TLEPC C I +I ++ Y + N Sbjct: 58 -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 105 Query: 117 YTLATCH-HSPEIYPGISEQRSRQIIQDFFKER 148 + T H E+ + ++R+ Q+ QDFFK + Sbjct: 106 HGDETLRAHGIEVEC-VDDERASQLYQDFFKAK 137 >gi|258510931|ref|YP_003184365.1| riboflavin biosynthesis protein RibD [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477657|gb|ACV57976.1| riboflavin biosynthesis protein RibD [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 371 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + +M ALE A+ + VGA+ V +++ + + T HAE+ A Sbjct: 1 MTEDERYMRMALEVARLGEGQTSPNPMVGAIVVNGGRVVGQGAHLMA----GTPHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM LYVTLEPC C AI +RR+ A + Sbjct: 57 LRMAGDAAQ-----GATLYVTLEPCNHHGRTPPCTDAILATGVRRVVVAALDVDPRTAGL 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A E+ G+ E +R++ + FF Sbjct: 112 GVKRLQEAG----IEVTVGVLEAEARELNRHFF 140 >gi|57652067|ref|YP_186652.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus COL] gi|151221874|ref|YP_001332696.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus str. Newman] gi|161509986|ref|YP_001575645.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|258450849|ref|ZP_05698907.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A5948] gi|262050319|ref|ZP_06023164.1| riboflavin specific deaminase [Staphylococcus aureus D30] gi|262053078|ref|ZP_06025250.1| riboflavin specific deaminase [Staphylococcus aureus 930918-3] gi|284024817|ref|ZP_06379215.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus aureus subsp. aureus 132] gi|294849930|ref|ZP_06790669.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9754] gi|304380637|ref|ZP_07363309.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|57286253|gb|AAW38347.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus COL] gi|150374674|dbj|BAF67934.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus str. Newman] gi|160368795|gb|ABX29766.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257861473|gb|EEV84276.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A5948] gi|259159032|gb|EEW44104.1| riboflavin specific deaminase [Staphylococcus aureus 930918-3] gi|259161579|gb|EEW46176.1| riboflavin specific deaminase [Staphylococcus aureus D30] gi|269941247|emb|CBI49636.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus TW20] gi|294823269|gb|EFG39699.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9754] gi|304340832|gb|EFM06760.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315195936|gb|EFU26300.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus aureus subsp. aureus CGS01] gi|329314447|gb|AEB88860.1| Riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus T0131] gi|329727002|gb|EGG63459.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus 21189] Length = 347 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%) Query: 5 NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 2 SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 Q+ +Y+TLEPC C I +I ++ Y + N Sbjct: 58 -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 105 Query: 117 YTLATCH-HSPEIYPGISEQRSRQIIQDFFKER 148 + T H E+ + ++R+ Q+ QDFFK + Sbjct: 106 HGDETLRAHGIEVEC-VDDERASQLYQDFFKAK 137 >gi|126650091|ref|ZP_01722324.1| riboflavin specific deaminase [Bacillus sp. B14905] gi|126593263|gb|EAZ87225.1| riboflavin specific deaminase [Bacillus sp. B14905] Length = 375 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 25/153 (16%) Query: 2 KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 K +M AL+ A A+ + P VGAV V N+ I+ +R HAE+ Sbjct: 8 NKDEKYMQLALDLA--ASAKGNTNPNPLVGAVIVKNDIIVGTGLHRKAGE----PHAEVH 61 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A RM LYVTLEPC CA + + + R+ +P Sbjct: 62 AFRMAGEHAKN-----ATLYVTLEPCSHFGKTPPCANLVKESGVSRVVVAMQDPNPTVAG 116 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A + E+ G+ EQ++R++ + F Sbjct: 117 RGIQLLRDAGI--AVEV--GVLEQQARRLNERF 145 >gi|167846243|ref|ZP_02471751.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia pseudomallei B7210] Length = 141 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 41/99 (41%), Positives = 58/99 (58%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ +M AL A+ A E+PVGAV V +++I+R N D +AHAE+ A+R Sbjct: 43 ERDRRYMRLALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 102 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 R L +P +LYVTLEPC MC+ AI ARI R+ + Sbjct: 103 AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVF 141 >gi|310657724|ref|YP_003935445.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Clostridium sticklandii DSM 519] gi|308824502|emb|CBH20540.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Clostridium sticklandii] Length = 382 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 25/145 (17%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 ++ FM AL A+ R + P VGAV V + K+I + +HAEI Sbjct: 18 LESDEKFMKLALSLAEKG--RGYVNPNPLVGAVIVKDGKVIGEGYHTAFGK----SHAEI 71 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 AI E + +YVTLEPC C AI ++ R+ ++P Sbjct: 72 EAINSA-----TEDIKSATMYVTLEPCCHQGKTPPCTEAIIKNQLARVVVATTDPNPLVS 126 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQ 135 +G + + EI G+ E+ Sbjct: 127 GSGIEKLKQSN----IEITVGVLEE 147 >gi|306830959|ref|ZP_07464121.1| riboflavin biosynthesis protein RibD [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426982|gb|EFM30092.1| riboflavin biosynthesis protein RibD [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 351 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 39/145 (26%), Positives = 59/145 (40%), Gaps = 19/145 (13%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ A+ EA+ + VGAV V N ++I+R + + HAE AI Sbjct: 2 HENYMAQAIAEAKKGFRQTYTNPLVGAVIVKNGRVIARGAHLQYGHE----HAEKNAI-- 55 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + E L LYVTLEPC C AI A I+++ G +P G + Sbjct: 56 -LYCEAPEELANSTLYVTLEPCHHTGKQPPCTQAIVEAGIKKVVVGQLDPNPLVAGKGLE 114 Query: 116 FYTLATCHHSPEIYPGISEQRSRQI 140 F E+ + E +R + Sbjct: 115 FLKSQG----IEVVTQVLENEARAL 135 >gi|148987916|ref|ZP_01819379.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae SP6-BS73] gi|147926380|gb|EDK77453.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae SP6-BS73] Length = 366 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A++ AQ A N P VGA+ V +N II + + HAE A++ Sbjct: 2 SDSKYMKLAIKLAQKGAGYVNPNPMVGAIIVKDNHIIGQGYHEFFGG----PHAERNALK 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 CR LYVTLEPC C AI + I R+ G+ + G Sbjct: 58 N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ GI E +I+ F Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138 >gi|167036452|ref|YP_001664030.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320114877|ref|YP_004185036.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166855286|gb|ABY93694.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319927968|gb|ADV78653.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 360 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 21/148 (14%) Query: 5 NVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ P VGAV V N KII + HAE+ A++ Sbjct: 2 EEYMKRALTLAEKGWGHTNPNPLVGAVIVKNGKIIGEGYHEYFGG----PHAEVNALKNA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 E + ++VTLEPC C I + I+R+Y +P NG + Sbjct: 58 V-----EDVKGSTMFVTLEPCSHYGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNGIKR 112 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E++ GI E+++R++ + F Sbjct: 113 LKEAG----IEVHVGIMEKKARKLNEIF 136 >gi|52841362|ref|YP_095161.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54294070|ref|YP_126485.1| hypothetical protein lpl1134 [Legionella pneumophila str. Lens] gi|54297084|ref|YP_123453.1| hypothetical protein lpp1129 [Legionella pneumophila str. Paris] gi|52628473|gb|AAU27214.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750869|emb|CAH12280.1| hypothetical protein lpp1129 [Legionella pneumophila str. Paris] gi|53753902|emb|CAH15373.1| hypothetical protein lpl1134 [Legionella pneumophila str. Lens] Length = 154 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 46/94 (48%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F+ +E A+ P + V N KI++ A N + D TAHAE+ AIR+ L Sbjct: 3 FIKRTIELARENVGHGGRPFACLIVQNGKILAEATNTVAQTHDPTAHAEVNAIRIATAKL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E L + D Y+ PC MC AA+ R++ + Sbjct: 63 GCEHLYDCDFYILAHPCPMCLAAMYYCSPRKVIF 96 >gi|238755138|ref|ZP_04616485.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia ruckeri ATCC 29473] gi|238706698|gb|EEP99068.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia ruckeri ATCC 29473] Length = 369 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 56/157 (35%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M ++M+ A E A+ + P VG V V + KI+ + HAE+ A Sbjct: 1 MHPDEIYMARAFELARLGRFTTSPNPNVGCVIVRDGKIVGEGYHLRAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM YVTLEPC CA A+ A IRR+ +P Sbjct: 57 LRMAGDAA-----RGATAYVTLEPCSHHGRTPPCADALVAAGIRRVVTAMQDPNPQVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A + G+ + + F K R Sbjct: 112 GLYQLKQAG----ITVEHGLMLAEAEAVNLGFLKRMR 144 >gi|315443623|ref|YP_004076502.1| cytosine/adenosine deaminase [Mycobacterium sp. Spyr1] gi|315261926|gb|ADT98667.1| cytosine/adenosine deaminase [Mycobacterium sp. Spyr1] Length = 146 Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 54/141 (38%), Gaps = 13/141 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A+EEA+ IP+GA + ++ NR +L D + HAE A R R Sbjct: 7 LDVAVEEARKGLAEGGIPIGAALFAADGTLLGSGHNRRVQLDDPSLHAETDAFRNAGRQR 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + TL PC C+ + I + G S GG H Sbjct: 67 G---YRSTTMVTTLSPCWYCSGLVRQFNIGAVVIGESRTFTGG--------HHWLAEHGV 115 Query: 127 EIYPGISEQRSRQIIQDFFKE 147 ++ + ++R +++DF + Sbjct: 116 KVTV-VDDERCVTLMRDFIAD 135 >gi|312171548|emb|CBX79806.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Erwinia amylovora ATCC BAA-2158] Length = 367 Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ P VG V V +++I+ + HAE+ A+RM Sbjct: 3 DEAYMARALELARRGRFTTTPNPNVGCVLVRDDQIVGEGYHMRAGE----PHAEVHALRM 58 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC C A+ A ++R+ +P G Sbjct: 59 AGEKS-----RGATAYVTLEPCSHHGRTPPCCEALIAAGVKRVVTAMQDPNPQVAGRGLY 113 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ + + + F K R Sbjct: 114 RLQQAG----IEVSHGMMMPEAEALNRGFLKRMR 143 >gi|261346387|ref|ZP_05974031.1| riboflavin biosynthesis protein RibD [Providencia rustigianii DSM 4541] gi|282565705|gb|EFB71240.1| riboflavin biosynthesis protein RibD [Providencia rustigianii DSM 4541] Length = 371 Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +++ ++M+ A E A+ + P VG V V + +++ ++ HAE+ A Sbjct: 2 LEQDRIYMARAFELARKGRFTTSPNPNVGCVIVRDGEVVGEGYHQKAGE----PHAEVHA 57 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM YVTLEPC CA A+ A + R+ +P Sbjct: 58 LRMAGDKA-----RGATAYVTLEPCSHHGRTPPCAEALIKAGVSRVVASMQDPNPQVAGR 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + A E I +++ + + F K R Sbjct: 113 GLYMLSQAG----IETSSNILLEQAEALNRGFLKRMR 145 >gi|21283440|ref|NP_646528.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus MW2] gi|49486593|ref|YP_043814.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus MSSA476] gi|297207517|ref|ZP_06923953.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911601|ref|ZP_07129045.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus TCH70] gi|21204881|dbj|BAB95576.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus MW2] gi|49245036|emb|CAG43497.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus MSSA476] gi|296887853|gb|EFH26750.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887022|gb|EFK82223.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus TCH70] Length = 347 Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%) Query: 5 NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 2 SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 Q+ +Y+TLEPC C I +I ++ Y + N Sbjct: 58 -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKITKVVYATKD-------NSLDT 105 Query: 117 YTLATCH-HSPEIYPGISEQRSRQIIQDFFKER 148 + T H E+ + ++R+ Q+ QDFFK + Sbjct: 106 HGDETLRAHGIEVEC-VDDERASQLYQDFFKAK 137 >gi|170760325|ref|YP_001788192.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A3 str. Loch Maree] gi|169407314|gb|ACA55725.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A3 str. Loch Maree] Length = 365 Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 60/156 (38%), Gaps = 25/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M+ N +M AL+ A+ ++ P VGA+ V NNKII ++ HAE+ Sbjct: 1 MEDYNFYMEKALKLAERG--EGKVNPNPKVGAIVVKNNKIIGEGYHKYFGG----PHAEV 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+R +Y+TLEPC CA I I + +P Sbjct: 55 YALREASEKA-----KGATMYITLEPCSHYGKTPPCAEYIVKMGISKAIIAMKDPNPLVE 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G E+ I E+ S+++ + F K Sbjct: 110 GRGIDILKQNG----IEVVTEIMEKESKKLNEVFIK 141 >gi|254491989|ref|ZP_05105167.1| riboflavin biosynthesis protein RibD [Methylophaga thiooxidans DMS010] gi|224462804|gb|EEF79075.1| riboflavin biosynthesis protein RibD [Methylophaga thiooxydans DMS010] Length = 368 Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M FM+ A++ A+ + P VG V V N++II + HAE+ A Sbjct: 1 MPSPEHFMARAIQLAERGLYTTDPNPRVGCVIVKNDEIIGEGWHMRAGEG----HAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I+ D YVTLEPC C A+ A+++R++ ++P + Sbjct: 57 IQAAGHAA-----EGADCYVTLEPCSHFGRTPPCVDALITAKVKRVFVAMTDPNPVVSGS 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A E++ I +S ++ F + R Sbjct: 112 GITRLRQAG----VEVHTDILAAQSEKLNPGFCQRMR 144 >gi|148242060|ref|YP_001227217.1| putative cytosine deaminase [Synechococcus sp. RCC307] gi|147850370|emb|CAK27864.1| Putative cytosine deaminase [Synechococcus sp. RCC307] Length = 149 Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 6/111 (5%) Query: 1 MKKG--NVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEIL 57 M + M A EA+ IP+GAV ++++R N+ + D T+H E Sbjct: 1 MDRDLRQQLMDQARAEAELGWAEGGIPIGAVLATESGEVVARGHNQRVQNGDPTSHGETQ 60 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 IR R L L TL PC MCA L RR+ G G Sbjct: 61 CIRNAGRRRDWHQL---TLVTTLSPCPMCAGTAVLLGFRRVLIGERRSFAG 108 >gi|154491828|ref|ZP_02031454.1| hypothetical protein PARMER_01449 [Parabacteroides merdae ATCC 43184] gi|154088069|gb|EDN87114.1| hypothetical protein PARMER_01449 [Parabacteroides merdae ATCC 43184] Length = 395 Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 24/161 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M +M+ +E A+ N P VGAV V KII +R AHAE+ Sbjct: 49 MVVEEKYMARCIELAR-GGEGNTAPNPMVGAVIVHKGKIIGEGFHRKCGE----AHAEVN 103 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ + + +L + +YV+LEPC CA I I R+ G +P Sbjct: 104 AV---ASVRDEALLRDSTIYVSLEPCSHYGKTPPCAELIIRKGIPRVVVGTLDPFPEVSG 160 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF--FK-ERR 149 G + A E+ G+ E+ +R + F F+ +R Sbjct: 161 RGVRMLREAG----IEVVTGVLEEEARALNPAFMTFQIRKR 197 >gi|317128514|ref|YP_004094796.1| riboflavin biosynthesis protein RibD [Bacillus cellulosilyticus DSM 2522] gi|315473462|gb|ADU30065.1| riboflavin biosynthesis protein RibD [Bacillus cellulosilyticus DSM 2522] Length = 362 Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 21/150 (14%) Query: 4 GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N +M A+E A+ VGAV V NN+I+ + HAE AI M Sbjct: 2 DNKYMKMAIELAKVTEGHTTPNPVVGAVIVNNNQIVGFGAHLKAGEH----HAEKHAIEM 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +YVTLEPC CA A+ A I+++ G+ +P G + Sbjct: 58 AKDKT-----EGATIYVTLEPCSHYGRTPPCADAVIEAGIKKVIIGSVDPNPKVSGRGIK 112 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G ++ + ++ FF Sbjct: 113 KLEDAG----IEVEVGCMKEETDKLNDVFF 138 >gi|294101991|ref|YP_003553849.1| riboflavin biosynthesis protein RibD [Aminobacterium colombiense DSM 12261] gi|293616971|gb|ADE57125.1| riboflavin biosynthesis protein RibD [Aminobacterium colombiense DSM 12261] Length = 369 Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M A+ A+ + P VG V V + I++ +R+ + HAE+ A+ Sbjct: 7 RDDEYYMRRAISLARRGTGQTSPNPLVGCVIVKEDTIVAEGYHRSYGM----PHAEVEAL 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + + +YV LEPC CA ++ +++ R+ G +P G Sbjct: 63 QRAG-----DGAKGATVYVNLEPCAHFGKTPPCAPQLARSKVSRVVIGMVDPNAVVNGKG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + G+ E + + + F + R Sbjct: 118 VEILRSNQL----ITETGVLEDECKWVNRGFIRRVR 149 >gi|300713101|ref|YP_003738913.1| Cytidine/deoxycytidylate deaminase, zinc-binding region (TBD) [Halalkalicoccus jeotgali B3] gi|299126785|gb|ADJ17122.1| Cytidine/deoxycytidylate deaminase, zinc-binding region (TBD) [Halalkalicoccus jeotgali B3] Length = 191 Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 3/144 (2%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + M E AQ A R + P G+V V ++ II NR D+ H E+ Sbjct: 47 NHDEHMRETFELAQEATARGDKPFGSVLVRDDTIIMSDSNREITEDDIRRHPELHLAYRA 106 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ--FYTLA 120 CR + + +Y + PC MCA+ ++ A R+ Y + G + G + + Sbjct: 107 CREYDADERAAMVMYTSTGPCPMCASGMATAGFGRVVYSVGSD-GIAVFTGIEPTVRSAE 165 Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144 E+ + R+I Q+F Sbjct: 166 ILDGISEVVGPVLNDEGRRIHQEF 189 >gi|293390135|ref|ZP_06634469.1| riboflavin biosynthesis protein RibD [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950669|gb|EFE00788.1| riboflavin biosynthesis protein RibD [Aggregatibacter actinomycetemcomitans D7S-1] Length = 374 Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 29/159 (18%) Query: 3 KGNVFMSCALEEAQNAALRNE---IP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 + FM AL+ A+ + E P VG V V N KI+ + + HAE+ Sbjct: 8 QDVAFMQLALDLAK----QGEFTTTPNPSVGCVLVKNGKIVGKGFHFKAGE----PHAEV 59 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 +A+R E YVTLEPC CA ++ A + ++ +P Sbjct: 60 MALREAG-----ENARGATAYVTLEPCFHFGRTPPCAKGLAEAGVSKVIAAMYDPNPQVA 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G Q A + G+ E+++ Q+ + F K R Sbjct: 115 GKGLQILADAGIQSAV----GLLEEKAEQLNKGFLKRMR 149 >gi|89097868|ref|ZP_01170755.1| riboflavin specific deaminase [Bacillus sp. NRRL B-14911] gi|89087370|gb|EAR66484.1| riboflavin specific deaminase [Bacillus sp. NRRL B-14911] Length = 371 Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 43/155 (27%), Positives = 62/155 (40%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL A+ + P VGAV V + +I + LK T HAE+ AIR Sbjct: 2 TDEDYMDLALSLARKTIGQTSPNPCVGAVVVKDGQIAGMGAH----LKAGTQHAEVHAIR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + ++YVTLEPC CA I + I+R+ + +P G Sbjct: 58 MA-----DGLARGAEIYVTLEPCSHHGKTPPCADLIIESGIKRVVIASIDPNPIVAGRGI 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ GI + + +I FF R Sbjct: 113 AKLEAAG----IEVEVGIRREEAEEINSAFFHFMR 143 >gi|325268454|ref|ZP_08135084.1| riboflavin biosynthesis protein RibD [Prevotella multiformis DSM 16608] gi|324988982|gb|EGC20935.1| riboflavin biosynthesis protein RibD [Prevotella multiformis DSM 16608] Length = 380 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 18/152 (11%) Query: 2 KKGNVFMSCALEEAQNA--ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58 + ++M L+ A+N + VGAV V + +II + HAE+ A Sbjct: 5 ETDEIYMRRCLQLARNGQQLAKPNPMVGAVIVSKDGRIIGEGYHVRCGEG----HAEVNA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + +L E +YV+LEPC CA I +RR+ G +P Sbjct: 61 F-ASVKKEEEALLHEATVYVSLEPCSHYGKTPPCADLIISKGVRRVVCGCIDPFSKVQGR 119 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A ++ G+ E+ ++ + F Sbjct: 120 GVKRLREAG----IDVTVGVLEKECLELNKRF 147 >gi|311745056|ref|ZP_07718841.1| riboflavin biosynthesis protein RibD [Algoriphagus sp. PR1] gi|311302325|gb|EAZ81787.2| riboflavin biosynthesis protein RibD [Algoriphagus sp. PR1] Length = 340 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 26/156 (16%) Query: 7 FMSCALEEAQNAALRNEI---PV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M ALE A+ R ++ PV G V V +KII ++ AHAE+ A+ Sbjct: 6 YMRRALELAELG--RGKVSPNPVVGCVIVKEDKIIGEGYHQKYGE----AHAEVNAVNS- 58 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + Q + +YVTLEPC CA + ++ ++ A + G Q Sbjct: 59 --VEDQTDIVGSTVYVTLEPCAHFGKTPPCANLLVDKKVGKVVIAAFDSNPLVGGKGIQI 116 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 A E+ G+ ++ +R + FF +++R Sbjct: 117 LEEAG----IEVETGLLQEEARWQNRRFFTQIEKKR 148 >gi|303258272|ref|ZP_07344279.1| riboflavin biosynthesis protein RibD [Burkholderiales bacterium 1_1_47] gi|302859025|gb|EFL82109.1| riboflavin biosynthesis protein RibD [Burkholderiales bacterium 1_1_47] Length = 363 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 18/155 (11%) Query: 3 KGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M ALE A+ A VG V V + +II + AHAE++A+R Sbjct: 4 SDCSYMRRALELAKKARFNCPPNPAVGCVIVKDRRIIGEGFTQKTGE----AHAEVMALR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E + +YVTLEPC CA A+ A++ R+ +P G Sbjct: 60 DAASR--GESVEGATVYVTLEPCSHYGRTPPCALALKNAKVARVVAALKDPNPLVAGKGL 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + A ++ G+ + + +I + F K +R Sbjct: 118 KMLEEAG----VKVECGLEAEEAEEINRGFLKRQR 148 >gi|312887826|ref|ZP_07747413.1| riboflavin biosynthesis protein RibD [Mucilaginibacter paludis DSM 18603] gi|311299645|gb|EFQ76727.1| riboflavin biosynthesis protein RibD [Mucilaginibacter paludis DSM 18603] Length = 343 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 58/150 (38%), Gaps = 22/150 (14%) Query: 8 MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M LE A+ + P VGAV V +II ++ AHAE+ A+ Sbjct: 1 MLRCLELAKLGL--GSVSPNPMVGAVIVHQGRIIGEGYHQRYGE----AHAEVNAVNNVI 54 Query: 64 RILSQ--EILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 ++L E +YV+LEPC CA I +I + G +P G + Sbjct: 55 NRFDDAAQLLSESVIYVSLEPCAHYGKTPPCADLIIKHQIPEVVVGCRDPFDQVNGKGIE 114 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A ++ G+ E+ + + FF Sbjct: 115 KLQAAG----VKVTVGVLEKECLDLNKRFF 140 >gi|49484015|ref|YP_041239.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257425881|ref|ZP_05602305.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus 55/2053] gi|257428548|ref|ZP_05604946.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus 65-1322] gi|257431182|ref|ZP_05607559.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus 68-397] gi|257433863|ref|ZP_05610221.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus E1410] gi|257436780|ref|ZP_05612824.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus M876] gi|282904343|ref|ZP_06312231.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus C160] gi|282906168|ref|ZP_06314023.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus Btn1260] gi|282909085|ref|ZP_06316903.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911393|ref|ZP_06319195.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus WBG10049] gi|282914562|ref|ZP_06322348.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus M899] gi|282919530|ref|ZP_06327265.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus C427] gi|282924908|ref|ZP_06332574.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus C101] gi|283958523|ref|ZP_06375974.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus A017934/97] gi|293503640|ref|ZP_06667487.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus 58-424] gi|293510656|ref|ZP_06669361.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus M809] gi|293537197|ref|ZP_06671877.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus M1015] gi|295428344|ref|ZP_06820973.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590692|ref|ZP_06949330.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus MN8] gi|49242144|emb|CAG40844.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257271575|gb|EEV03721.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus 55/2053] gi|257275389|gb|EEV06876.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus 65-1322] gi|257278130|gb|EEV08778.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus 68-397] gi|257281956|gb|EEV12093.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus E1410] gi|257284131|gb|EEV14254.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus M876] gi|282313274|gb|EFB43670.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus C101] gi|282317340|gb|EFB47714.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus C427] gi|282321743|gb|EFB52068.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus M899] gi|282325088|gb|EFB55398.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus WBG10049] gi|282327349|gb|EFB57644.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331460|gb|EFB60974.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus Btn1260] gi|282595961|gb|EFC00925.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus C160] gi|283790672|gb|EFC29489.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus A017934/97] gi|290920042|gb|EFD97110.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus M1015] gi|291095306|gb|EFE25571.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus 58-424] gi|291466547|gb|EFF09068.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus M809] gi|295127744|gb|EFG57381.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575578|gb|EFH94294.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus MN8] gi|312437774|gb|ADQ76845.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus TCH60] gi|315195682|gb|EFU26069.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus CGS00] Length = 347 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%) Query: 5 NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 2 SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 Q+ +Y+TLEPC C I +I ++ Y + N Sbjct: 58 -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 105 Query: 117 YTLATC-HHSPEIYPGISEQRSRQIIQDFFKER 148 + T H E+ + ++R+ Q+ QDFFK + Sbjct: 106 HGDETIRDHGIEVEC-VDDERASQLYQDFFKAK 137 >gi|168187451|ref|ZP_02622086.1| riboflavin biosynthesis protein RibD [Clostridium botulinum C str. Eklund] gi|169294672|gb|EDS76805.1| riboflavin biosynthesis protein RibD [Clostridium botulinum C str. Eklund] Length = 372 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 23/150 (15%) Query: 6 VFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A+E ++ A P VGAV V +NKII + + HAE+ A++ Sbjct: 4 KFMKKAIELSKLGAGYT-YPNPLVGAVIVKDNKIIGQGYHERFGGL----HAEVNALKNA 58 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 E + +YVTLEPC CA I + I+ + G +P G Sbjct: 59 -----TEDVTGATMYVTLEPCSHYGKTPPCANTIVKSGIKEVIVGMRDPNELVAGRGINI 113 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 ++ GI E+ ++I + F K Sbjct: 114 LKENG----IKVTVGIFEEEIKKINEIFIK 139 >gi|167038695|ref|YP_001661680.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X514] gi|300913745|ref|ZP_07131062.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X561] gi|307723238|ref|YP_003902989.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X513] gi|166852935|gb|ABY91344.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X514] gi|300890430|gb|EFK85575.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X561] gi|307580299|gb|ADN53698.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X513] Length = 360 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 21/148 (14%) Query: 5 NVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ N P VGAV V N KII + HAE+ A++ Sbjct: 2 EEYMKRALTLAKKGWGYTNPNPLVGAVIVKNGKIIGEGYHEYFGG----PHAEVNALKNA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 E + ++VTLEPC C I + I+R+Y +P NG + Sbjct: 58 V-----ENVEGSTMFVTLEPCSHYGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNGIKR 112 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E++ G+ E+ +R++ + F Sbjct: 113 LKEAG----IEVHVGMMEKEARKLNEIF 136 >gi|289755883|ref|ZP_06515261.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis EAS054] gi|289696470|gb|EFD63899.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis EAS054] Length = 111 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 28/78 (35%), Positives = 41/78 (52%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 L VT+EPCTMCA A+ LAR+ RL +GA PK G + + +H PE+ G Sbjct: 32 RGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGG 91 Query: 132 ISEQRSRQIIQDFFKERR 149 + + ++ FF +R Sbjct: 92 VLARECAAPLEAFFARQR 109 >gi|271966223|ref|YP_003340419.1| cytidine/deoxycytidylate deaminase [Streptosporangium roseum DSM 43021] gi|270509398|gb|ACZ87676.1| cytidine/deoxycytidylate deaminase [Streptosporangium roseum DSM 43021] Length = 167 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 43/94 (45%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F ++ A+ P V V + +I++ + N+ + D TAHAEILAIR C L Sbjct: 3 FAQRTVDIARRNVTEGGRPFATVIVKDGEILAESANKVAQTSDPTAHAEILAIREACMRL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E L +YV PC MC ++ + + Sbjct: 63 GTEHLTGTTIYVLAHPCPMCLGSLYYCSPDEVVF 96 >gi|328676184|gb|AEB27054.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Francisella cf. novicida Fx1] Length = 355 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 22/154 (14%) Query: 1 MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MK +M AL A L VG + V N IIS + AHAE+ Sbjct: 1 MKNIDKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGE----AHAEVH 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ YVTLEPC C I A I+++ +P Sbjct: 57 ALTKAVDKA-----KGATAYVTLEPCCHHGRTPPCTDTIIKAGIKKVIIATLDPNPKVAG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + + + G+ E++++++ + FF Sbjct: 112 KGVERLK----NAGITVEVGLLEKQAQELNKIFF 141 >gi|187930956|ref|YP_001890940.1| riboflavin biosynthesis protein RibD [Francisella tularensis subsp. mediasiatica FSC147] gi|187711865|gb|ACD30162.1| riboflavin biosynthesis protein RibD [Francisella tularensis subsp. mediasiatica FSC147] Length = 355 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 22/154 (14%) Query: 1 MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MK +M AL A L VG + V N IIS + AHAE+ Sbjct: 1 MKNIDKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGE----AHAEVH 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ YVTLEPC C I A I+++ +P Sbjct: 57 ALTKAVDKA-----KGATAYVTLEPCCHCGRTPPCTDTIIKAGIKKVIIATLDPNPKVAG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + + + G+ E++++++ + FF Sbjct: 112 KGVERLK----NAGITVEVGLLEKQAQELNKIFF 141 >gi|254375242|ref|ZP_04990722.1| hypothetical protein FTDG_01434 [Francisella novicida GA99-3548] gi|151572960|gb|EDN38614.1| hypothetical protein FTDG_01434 [Francisella novicida GA99-3548] Length = 355 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 22/154 (14%) Query: 1 MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MK +M AL A L VG + V N IIS + AHAE+ Sbjct: 1 MKNIDKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGE----AHAEVH 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ YVTLEPC C I A I+++ +P Sbjct: 57 ALTKAVDKA-----KGATAYVTLEPCCHHGRTPPCTDTIIKAGIKKVIIATLDPNPKVAG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + + + G+ E++++++ + FF Sbjct: 112 KGVERLK----NAGITVEVGLLEKQAQELNKIFF 141 >gi|62260407|gb|AAX77904.1| unknown protein [synthetic construct] Length = 390 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 22/154 (14%) Query: 1 MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MK +M AL A L VG + V N IIS + AHAE+ Sbjct: 27 MKNIDKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGE----AHAEVH 82 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ YVTLEPC C I A I+++ +P Sbjct: 83 ALTKAVDKA-----KGATAYVTLEPCCHCGRTPPCTDTIIKAGIKKVIIATLDPNPKVAG 137 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + + + G+ E++++++ + FF Sbjct: 138 KGVERLK----NAGITVEVGLLEKQAQELNKIFF 167 >gi|89255521|ref|YP_512882.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp. holarctica LVS] gi|115314040|ref|YP_762763.1| bifunctional 5-amino-6-(5-phosphoribosylamino)uracil reductase/ diaminohydroxyphosphoribosylaminopyrimidine deaminase [Francisella tularensis subsp. holarctica OSU18] gi|156501455|ref|YP_001427520.1| riboflavin biosynthesis protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010294|ref|ZP_02275225.1| riboflavin biosynthesis protein RibD [Francisella tularensis subsp. holarctica FSC200] gi|254366949|ref|ZP_04982986.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp. holarctica 257] gi|254368485|ref|ZP_04984502.1| hypothetical protein FTAG_01328 [Francisella tularensis subsp. holarctica FSC022] gi|290954250|ref|ZP_06558871.1| riboflavin biosynthesis protein [Francisella tularensis subsp. holarctica URFT1] gi|295312314|ref|ZP_06803101.1| riboflavin biosynthesis protein [Francisella tularensis subsp. holarctica URFT1] gi|89143352|emb|CAJ78519.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp. holarctica LVS] gi|115128939|gb|ABI82126.1| bifunctional 5-amino-6-(5-phosphoribosylamino)uracil reductase/ diaminohydroxyphosphoribosylaminopyrimidine deaminase [Francisella tularensis subsp. holarctica OSU18] gi|134252776|gb|EBA51870.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp. holarctica 257] gi|156252058|gb|ABU60564.1| riboflavin biosynthesis protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|157121379|gb|EDO65580.1| hypothetical protein FTAG_01328 [Francisella tularensis subsp. holarctica FSC022] Length = 355 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 22/154 (14%) Query: 1 MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MK +M AL A L VG + V N IIS + AHAE+ Sbjct: 1 MKNIDKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGE----AHAEVH 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ YVTLEPC C I A I+++ +P Sbjct: 57 ALTKAVDKA-----KGATAYVTLEPCCHCGRTPPCTDTIIKAGIKKVIIATLDPNPKVAG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + + + G+ E++++++ + FF Sbjct: 112 KGVERLK----NAGITVEVGLLEKQAQELNKIFF 141 >gi|56708681|ref|YP_170577.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp. tularensis SCHU S4] gi|110671153|ref|YP_667710.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp. tularensis FSC198] gi|134302741|ref|YP_001122709.1| riboflavin biosynthesis protein RibD [Francisella tularensis subsp. tularensis WY96-3418] gi|224457890|ref|ZP_03666363.1| riboflavin biosynthesis protein RibD [Francisella tularensis subsp. tularensis MA00-2987] gi|254371312|ref|ZP_04987314.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254875556|ref|ZP_05248266.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp. tularensis MA00-2987] gi|56605173|emb|CAG46304.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp. tularensis SCHU S4] gi|110321486|emb|CAL09687.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp. tularensis FSC198] gi|134050518|gb|ABO47589.1| Riboflavin biosynthesis protein RibD [Francisella tularensis subsp. tularensis WY96-3418] gi|151569552|gb|EDN35206.1| hypothetical protein FTBG_01094 [Francisella tularensis subsp. tularensis FSC033] gi|254841555|gb|EET19991.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp. tularensis MA00-2987] gi|282159932|gb|ADA79323.1| Riboflavin biosynthesis protein RibD [Francisella tularensis subsp. tularensis NE061598] Length = 355 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 22/154 (14%) Query: 1 MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MK +M AL A L VG + V N IIS + AHAE+ Sbjct: 1 MKNIDKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGE----AHAEVH 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ YVTLEPC C I A I+++ +P Sbjct: 57 ALTKAVDKA-----KGATAYVTLEPCCHCGRTPPCTDTIIKAGIKKVIIATLDPNPKVAG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + + + G+ E++++++ + FF Sbjct: 112 KGVERLK----NAGITVEVGLLEKQAQELNKIFF 141 >gi|332291081|ref|YP_004429690.1| riboflavin biosynthesis protein RibD [Krokinobacter diaphorus 4H-3-7-5] gi|332169167|gb|AEE18422.1| riboflavin biosynthesis protein RibD [Krokinobacter diaphorus 4H-3-7-5] Length = 333 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 20/160 (12%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 MK N +++ + A+N VGAV V NNKII+ HAE+ Sbjct: 1 MKIHNTYINRCIALAKNGLPVAMPNPSVGAVLVHNNKIIAEGY----TSDYGGPHAEVNC 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + + E++ + LYV+LEPC CA + + I+++ G +P Sbjct: 57 I-AFAKANTPELIAKSTLYVSLEPCSHWGKTPPCADLVVASGIKKVVIGTIDPFAKVAGA 115 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 G + A ++ G+ E+ ++I + FF +++R Sbjct: 116 GIKRLIQAG----VDVTVGVQEKECQEINKRFFTYHEKKR 151 >gi|308185884|ref|YP_003930015.1| bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis [Pantoea vagans C9-1] gi|308056394|gb|ADO08566.1| bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis [Pantoea vagans C9-1] Length = 366 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 23/155 (14%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ ALE A+ +P VG V V + +++ ++ HAE+ A+R Sbjct: 2 DERYMARALELARRGRFTT-MPNPNVGCVIVRDGEVVGEGWHQRAGE----PHAEVHALR 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 57 MAGEKA-----RGATAYVTLEPCSHHGRTPPCCDALIAAGVIRVVAAMQDPNPQVAGRGL 111 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + + + F K R Sbjct: 112 HRLHQAG----IDVSHGLMMPEAEALNRGFLKRMR 142 >gi|313891665|ref|ZP_07825272.1| riboflavin biosynthesis protein RibD [Dialister microaerophilus UPII 345-E] gi|313119943|gb|EFR43128.1| riboflavin biosynthesis protein RibD [Dialister microaerophilus UPII 345-E] Length = 378 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 21/154 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + + +MS AL+ A++ E P VGAV V N K+I ++ HAE+ A Sbjct: 3 INEDEKWMSHALDLAKHGYWYTETNPLVGAVLVKNGKVIGEGWHKKYGD----VHAEVNA 58 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + +E LYVTLEPC C + +++R+ +P Sbjct: 59 FKN-----CKENTEHATLYVTLEPCCHYGKTPPCLNLVLQKKVKRVVIAMKDPNPLVSGK 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + ++ G+ E + ++ + F K Sbjct: 114 SIKILKENG----IQVIVGVLENEAVKLNEIFIK 143 >gi|228472970|ref|ZP_04057727.1| riboflavin biosynthesis protein RibD [Capnocytophaga gingivalis ATCC 33624] gi|228275552|gb|EEK14329.1| riboflavin biosynthesis protein RibD [Capnocytophaga gingivalis ATCC 33624] Length = 347 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 53/154 (34%), Gaps = 21/154 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M +M L A A P VG+V V KII + HAE+ Sbjct: 1 MTIDQRYMQRCLSLAGKALGYT-YPNPLVGSVIVHQGKIIGEGWHTKAGE----PHAEVN 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AI + +L E LYV LEPC CA I I ++ G + Sbjct: 56 AI---ASVKDSSLLKESVLYVNLEPCAHFGKTPPCADLIIEKEIPKVVIGCMDIFSKVAG 112 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A E+ G+ E + + FF Sbjct: 113 KGIERLQKAGR----EVVVGVLENECQALNTRFF 142 >gi|315646375|ref|ZP_07899493.1| riboflavin biosynthesis protein RibD [Paenibacillus vortex V453] gi|315278018|gb|EFU41338.1| riboflavin biosynthesis protein RibD [Paenibacillus vortex V453] Length = 366 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEI-PV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +MS AL+ A+ A + I PV G V V N + + R T HAEI A+ Sbjct: 5 NDEFYMSLALDLAERAQGQTGINPVVGCVIVKNGALAGVGTHLER----GTPHAEIHALN 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C+ + ++R+ +P G Sbjct: 61 MAGTKA-----AGSTVYVTLEPCSHYGATPPCSERLIAEGVKRVVVACEDPNPLVAGKGI 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q A E+ GI +R+ ++ + F K Sbjct: 116 QMLRAAG----IEVVTGILRERALRLNEAFIK 143 >gi|307825581|ref|ZP_07655799.1| riboflavin biosynthesis protein RibD [Methylobacter tundripaludum SV96] gi|307733467|gb|EFO04326.1| riboflavin biosynthesis protein RibD [Methylobacter tundripaludum SV96] Length = 361 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 59/153 (38%), Gaps = 22/153 (14%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ A+ A+ + P VG V V + ++I + + HAE+ A++ Sbjct: 5 RDAFYMAQAISLAKKGRYTTDPNPRVGCVLVRDGEVIGQGWHVKAGQG----HAEVEALK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC C A+ A + R+ +P +G Sbjct: 61 NV------PDAKGATAYVTLEPCSHQGRTPPCCDALIKAGVSRVVAAMQDPNPQVSGSGL 114 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + +A E+ G+ ++ + + + F K Sbjct: 115 KKLKVAG----IEVICGVLQEDALALNRGFIKR 143 >gi|189220330|ref|YP_001940970.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4] gi|189187188|gb|ACD84373.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4] Length = 159 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 43/137 (31%), Positives = 59/137 (43%), Gaps = 12/137 (8%) Query: 1 MKK--GNVFMSCALEEAQNAAL--RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 MK+ F+ A++ L R + P G V VL ++I+ + NR L D TAHAEI Sbjct: 1 MKRSMDLRFLERTACLARDNVLSNRGD-PFGPVVVLEDQIVGQGANRVTVLCDPTAHAEI 59 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN---PKGGGIENG 113 A+R L + L LY+ + P MC A ARI+R+ G N K G Sbjct: 60 EAMRQAAIKLGRFDLRGCLLYMNINPYPMCLTAAYWARIKRIVCGGPNTLTEKAGFKGT- 118 Query: 114 TQFYTLATCHHSPEIYP 130 Y H E+ Sbjct: 119 ---YLWNEIRHPLEVRS 132 >gi|289522481|ref|ZP_06439335.1| putative cytosine deaminase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504317|gb|EFD25481.1| putative cytosine deaminase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 165 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 1/103 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ A+E ++ A P GAV V ++ GN K T HAE++ + Sbjct: 9 DHIKYLRLAIETSRKARESGNTPFGAVLVGPEGDVLLEQGNVEITEKRCTGHAELVLVEK 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 +I ++ L + LY ++EPC MC AI + + + Y S Sbjct: 69 ASQIYDKDFLWQCILYTSVEPCAMCTGAIYWSNVGTIIYALSE 111 >gi|297543534|ref|YP_003675836.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841309|gb|ADH59825.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 360 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 21/148 (14%) Query: 5 NVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ N P VGAV V N KII + HAE+ A++ Sbjct: 2 EEYMKRALTLAKKGWGYTNPNPLVGAVIVKNGKIIGEGYHEYFGG----PHAEVNALKNA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 E + ++VTLEPC C I + I+R+Y +P NG + Sbjct: 58 V-----ENVEGSTMFVTLEPCSHYGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNGIKR 112 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E++ G+ E+ +R++ + F Sbjct: 113 LKEAG----IEVHVGMMEKEARKLNEIF 136 >gi|218549926|ref|YP_002383717.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia fergusonii ATCC 35469] gi|218357467|emb|CAQ90106.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia fergusonii ATCC 35469] Length = 367 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ + HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIATGVARVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|50120065|ref|YP_049232.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Pectobacterium atrosepticum SCRI1043] gi|49610591|emb|CAG74036.1| riboflavin biosynthesis protein [Pectobacterium atrosepticum SCRI1043] Length = 369 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 58/157 (36%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + ++M+ ALE A+ P VG V V + +I+ + HAE+ A Sbjct: 1 MPQDELYMARALELARRGRFTTAPNPNVGCVIVRDGEIVGEGYHFRAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM E YVTLEPC CA A+ A + R+ +P Sbjct: 57 LRMAG-----ERARGATAYVTLEPCSHHGRTPPCADALITAGVSRVVAAMQDPNPQVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A + G+ + ++ F K R Sbjct: 112 GLHRLQQAG----ITVSHGLMMAEAEKVNVGFLKRMR 144 >gi|167855405|ref|ZP_02478171.1| formyltetrahydrofolate deformylase [Haemophilus parasuis 29755] gi|167853471|gb|EDS24719.1| formyltetrahydrofolate deformylase [Haemophilus parasuis 29755] Length = 363 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++FM+ A+E A+ N P VG V V + I++ ++ HAE AI Sbjct: 2 THSIFMARAIELAELGRGWTNPNPLVGCVIVKDGNIVAEGYHQRYGE----WHAERKAI- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + QE L YVTLEPC C+ + I+ + G+S+P G Sbjct: 57 ----LHCQEDLSGATAYVTLEPCCHHGRTPPCSDLLIERGIKTVVIGSSDPNPLVAGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ + + + FF Sbjct: 113 AQLRQAG----IEVIENVMKAECDALNPIFF 139 >gi|302387516|ref|YP_003823338.1| riboflavin biosynthesis protein RibD [Clostridium saccharolyticum WM1] gi|302198144|gb|ADL05715.1| riboflavin biosynthesis protein RibD [Clostridium saccharolyticum WM1] Length = 368 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 59/153 (38%), Gaps = 22/153 (14%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ +M A+ AQ L N P VGAV V +II HAE A Sbjct: 1 MEDME-YMGMAVRLAQKGCGLVNPNPMVGAVLVKEGRIIGEGYYERYGAL----HAERNA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + +E LYVTLEPC C AI + IRR+ G+ +P Sbjct: 56 I-----LNCRESPEGTTLYVTLEPCCHHGKTPPCTEAILQSGIRRVVIGSHDPNPLVKGK 110 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + E+ + ++ ++ + FF Sbjct: 111 GIKQLREQG----IEVVEDVLKEECDKLNEVFF 139 >gi|288929017|ref|ZP_06422863.1| riboflavin biosynthesis protein RibD [Prevotella sp. oral taxon 317 str. F0108] gi|288330001|gb|EFC68586.1| riboflavin biosynthesis protein RibD [Prevotella sp. oral taxon 317 str. F0108] Length = 348 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 41/158 (25%), Positives = 62/158 (39%), Gaps = 22/158 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M L+ A+ L P VGAV V N++II + + HAE+ A Sbjct: 42 DERYMRRCLQLARCGLL-GAKPNPMVGAVIVYNDRIIGEGYH----IHCGEGHAEVNAF- 95 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 R + LP LYV+LEPC CA I + R+ G +P G Sbjct: 96 AAIRPEDEPFLPHSTLYVSLEPCSHYGKTPPCADLIIRKGVPRVVVGCVDPFSKVQGRGI 155 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E+ + + F +E+R Sbjct: 156 EKLRQAG----IEVVVGVLEKACLALNRRFIVFQREQR 189 >gi|169830807|ref|YP_001716789.1| riboflavin biosynthesis protein RibD [Candidatus Desulforudis audaxviator MP104C] gi|169637651|gb|ACA59157.1| riboflavin biosynthesis protein RibD [Candidatus Desulforudis audaxviator MP104C] Length = 372 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 57/151 (37%), Gaps = 21/151 (13%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL+ A A R P VGAV V + +I+ R + L HAEI+A+ Sbjct: 2 DQEYMRMALDLAVRARGRTSPNPLVGAVVVRDGEIVGRGYHARAGL----PHAEIVALAQ 57 Query: 62 GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115 LYV+LEPC C A+ A +RR+ +P G Sbjct: 58 AGEAA-----RGSTLYVSLEPCCHFGRTGPCTEAVIAAGVRRVVTAMRDPNPKVAGRGIA 112 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ + + ++ + F K Sbjct: 113 RLREAG----VEVTEDVLRDEAARLNEIFIK 139 >gi|58699421|ref|ZP_00374173.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of Drosophila ananassae] gi|225630417|ref|YP_002727208.1| riboflavin biosynthesis protein RibD [Wolbachia sp. wRi] gi|58534061|gb|EAL58308.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of Drosophila ananassae] gi|225592398|gb|ACN95417.1| riboflavin biosynthesis protein RibD [Wolbachia sp. wRi] Length = 360 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 59/153 (38%), Gaps = 25/153 (16%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + FMS AL A+ + P VG V V + I+S HAE++A Sbjct: 2 TDDHFMSIALRLAEKNL--GNVAPNPAVGCVIVKDGTIVSEGY----TGIGGRPHAEVVA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 ++ +Y+TLEPC C A I A I+R+ +P Sbjct: 56 LQNAKDSTH-----GATIYITLEPCCHHGVTGPCTAKIIKASIKRVVIATIDPDSRVSGR 110 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A E+ GI ++ ++++ FF Sbjct: 111 GMKALKEAG----IEVEQGIMQKEAKELNVGFF 139 >gi|290954851|ref|YP_003486033.1| nucleotide deaminase [Streptomyces scabiei 87.22] gi|260644377|emb|CBG67462.1| putative nucleotide deaminase [Streptomyces scabiei 87.22] Length = 182 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 33/129 (25%) Query: 8 MSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ A+ A + P GAV + + +IISR NR D TAHAE+ AIR + L Sbjct: 1 MTEAVRLATESVNGGWGGPFGAVIIRDGEIISRGQNRVLLTGDPTAHAEVEAIRKAVQRL 60 Query: 67 SQE--------------------------------ILPEVDLYVTLEPCTMCAAAISLAR 94 + E +L +Y++ PC MC +AI +R Sbjct: 61 NPEAPSISEEHQNESTLAYVSRPEGSPDPVPERARMLMGCSIYISGAPCPMCMSAIYWSR 120 Query: 95 IRRLYYGAS 103 I +Y+ + Sbjct: 121 IDAVYFASD 129 >gi|220929424|ref|YP_002506333.1| riboflavin biosynthesis protein RibD [Clostridium cellulolyticum H10] gi|219999752|gb|ACL76353.1| riboflavin biosynthesis protein RibD [Clostridium cellulolyticum H10] Length = 367 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 58/152 (38%), Gaps = 21/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M LE A+ R P VGAV N KIIS + L AHAE+ A Sbjct: 1 MNIHEFYMKRTLEIAKEGWGRTNPNPLVGAVIAKNGKIISEGFH--EALG--CAHAEVCA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + LYV LEPC C AI + I+ + +P Sbjct: 57 FSNA-----PTDISGATLYVNLEPCSHYGRTPPCVKAIIDSGIKEVVVAMVDPNPKVSGK 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A + + G+ E+ ++++ + F Sbjct: 112 GIQMLKDANIN----VIVGVLEEEAKKLNEIF 139 >gi|114771641|ref|ZP_01449045.1| riboflavin biosynthesis protein RibD [alpha proteobacterium HTCC2255] gi|114547713|gb|EAU50603.1| riboflavin biosynthesis protein RibD [alpha proteobacterium HTCC2255] Length = 365 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 2 KKGNVFMSCALEE-AQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M AL A+ A P VG V V N+ +I R + HAE +A+ Sbjct: 5 NTDERWMRLALSLGARGAGRTWPNPFVGCVIVKNSLVIGRGY----TQQGGRPHAETVAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + +YVTLEPC C + A I+R+ A +P G Sbjct: 61 QQASN-----DAENSTVYVTLEPCAHTGKTPPCVNNLIKAGIKRVVIAAIDPDHRVSGKG 115 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 Q + E+ GI ++ + + FF Sbjct: 116 IQILK----NAGIEVSVGILKEEAEKAHAGFF 143 >gi|85090433|ref|XP_958414.1| cytosine deaminase [Neurospora crassa OR74A] gi|28919775|gb|EAA29178.1| cytosine deaminase [Neurospora crassa OR74A] Length = 159 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 12/142 (8%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAIRMGCRIL 66 ++ A +EA+ + + IP+GA + + I+ R N+ +L H E + R+ Sbjct: 7 LAIAFKEAKKSYEQGGIPIGAALISSTGIVLGRGHNQRVQLDSPIHHGETATLLNAGRLP 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + +Y TL PC MC AI L +IRR+ G ++ G + Sbjct: 67 ASTY-ANSTMYTTLSPCDMCTGAILLYKIRRVVIGENSTFKAA---GEDYLRQRG----V 118 Query: 127 EIYPGISEQ-RSRQIIQDFFKE 147 E+ + + R +++ F +E Sbjct: 119 EVV--VMDDQECRTLMERFVRE 138 >gi|189500554|ref|YP_001960024.1| riboflavin biosynthesis protein RibD [Chlorobium phaeobacteroides BS1] gi|189495995|gb|ACE04543.1| riboflavin biosynthesis protein RibD [Chlorobium phaeobacteroides BS1] Length = 371 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 23/155 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 ++ +MS LE A A + P VG++ VL+ +II + HAE+ Sbjct: 10 RQHERYMSRCLELAGKGA--GYVSPNPMVGSLLVLDGQIIGEGYHERYGG----PHAEVN 63 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AI + E L E LYV LEPC C+ I I R+ +P Sbjct: 64 AI---ASVKDSEQLRESTLYVNLEPCSHHGKTPPCSDLIIQKNIPRVVVACRDPHRMVAG 120 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G Q A E+ G+ E+RS ++ + F K Sbjct: 121 RGIQKLLDAG----VEVIEGVLEERSLKLNEAFMK 151 >gi|152998046|ref|YP_001342881.1| riboflavin biosynthesis protein RibD [Marinomonas sp. MWYL1] gi|150838970|gb|ABR72946.1| riboflavin biosynthesis protein RibD [Marinomonas sp. MWYL1] Length = 384 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ A++ A+ + P VG V V + +II + + HAE+ A+ Sbjct: 5 NHEYWMAKAIQLAKKGRYTTHPNPRVGCVLVKDQQIIGQGFHVKAGEG----HAEVNALA 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ A + R+ YG +P NG Sbjct: 61 DA-----KHDAVGATAYVTLEPCSHQGKTPPCADALIKAGVARVVYGMQDPNPEVSGNGL 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A EI I E + F K R Sbjct: 116 AKIKKAG----IEIIGPILESDCEALNPGFIKRMR 146 >gi|194336939|ref|YP_002018733.1| riboflavin biosynthesis protein RibD [Pelodictyon phaeoclathratiforme BU-1] gi|194309416|gb|ACF44116.1| riboflavin biosynthesis protein RibD [Pelodictyon phaeoclathratiforme BU-1] Length = 366 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 56/154 (36%), Gaps = 23/154 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 FM ALE A A + P VGAV V + +II ++ HAE+ A Sbjct: 5 DDLFFMRRALELAVLGA--GSVSPNPMVGAVIVCDGEIIGEGYHQQFGG----PHAEVHA 58 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + + +L LYVTLEPC C+ I I R+ G +P Sbjct: 59 I---ASVEDEALLHHSTLYVTLEPCSHFGKTPPCSDLIVEKGIPRVVIGCRDPHVKVAGK 115 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G A + G+ E + F K Sbjct: 116 GIAKLQAAG----IRVTEGVLEAECIGCNEAFIK 145 >gi|302803749|ref|XP_002983627.1| hypothetical protein SELMODRAFT_228959 [Selaginella moellendorffii] gi|300148464|gb|EFJ15123.1| hypothetical protein SELMODRAFT_228959 [Selaginella moellendorffii] Length = 216 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + F+S A++EA + P GAV V NN+++ N D TAHAE+ A+R Sbjct: 59 DRDYKFLSKAVDEAYKGVTCGDGGPFGAVVVRNNEVVVSCHNMVLRHTDPTAHAEVTAVR 118 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 C+ L++ L + +++ + EPC MC AI L+RI+RL YGA + F A Sbjct: 119 EACKKLNRLELSDCEIFASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAVGF-DDFIADA 177 >gi|220904884|ref|YP_002480196.1| riboflavin biosynthesis protein RibD [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869183|gb|ACL49518.1| riboflavin biosynthesis protein RibD [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 385 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 58/154 (37%), Gaps = 21/154 (13%) Query: 1 MKKGNV--FMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M + + FM A+ AQ + VGAV V + I++R +R L HAE+ Sbjct: 1 MSELDYTPFMREAIALAQQGRWKTCPNPMVGAVLVRDGHIVARGWHRAFGLD----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 + E L VTLEPC C A+ A I+++ G S+P Sbjct: 57 DCLNDAAAQGVDP--SECTLVVTLEPCCHQGKTPPCTDAVLRAGIKKIVVGLSDPNPEAC 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ G+ R ++ DF Sbjct: 115 GGACRLRES-----GLDVIEGVCADACRDLVADF 143 >gi|121533690|ref|ZP_01665517.1| riboflavin biosynthesis protein RibD [Thermosinus carboxydivorans Nor1] gi|121307681|gb|EAX48596.1| riboflavin biosynthesis protein RibD [Thermosinus carboxydivorans Nor1] Length = 379 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 19/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VGAV V + I+ + T HAEI AI + + LYVTLEPC+ Sbjct: 27 VGAVIVKDGTIVGEGWHHRA----GTPHAEIHAINQAGDLA-----KDATLYVTLEPCSH 77 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C AI A I R+ ++P G +F E+ G+ + Q Sbjct: 78 YGRTGPCVQAIVQAGITRVVAAMTDPNPLVAGQGFKFLRENG----VEVIEGVLATEAAQ 133 Query: 140 IIQDFFK 146 + + F K Sbjct: 134 LNEVFIK 140 >gi|29831349|ref|NP_825983.1| cytidine/deoxycytidine deaminase [Streptomyces avermitilis MA-4680] gi|29608464|dbj|BAC72518.1| putative cytidine/deoxycytidine deaminase [Streptomyces avermitilis MA-4680] Length = 153 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 15/144 (10%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +++ A+EEA+ IP+GA + ++ R NR + D + HAE A R R Sbjct: 12 AWLATAVEEARAGLAEGGIPIGAALYGADGALLGRGHNRRVQDDDPSMHAETAAFRSAGR 71 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + TL PC C+ + I R+ G + GG + + H Sbjct: 72 QRT---YRGTTMVTTLSPCWYCSGLVRQFGISRVVVGEAATFHGGHDWLAE--------H 120 Query: 125 SPEIYPGISEQ-RSRQIIQDFFKE 147 EI + + +++ F K Sbjct: 121 GVEIV--LLDDPECTALLRGFIKN 142 >gi|310779807|ref|YP_003968139.1| riboflavin biosynthesis protein RibD [Ilyobacter polytropus DSM 2926] gi|309749130|gb|ADO83791.1| riboflavin biosynthesis protein RibD [Ilyobacter polytropus DSM 2926] Length = 359 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 55/153 (35%), Gaps = 25/153 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M AL+ A + P VGAV V N I+ ++ HAE+ A+ Sbjct: 2 DKKYMETALKLALKG--EGNVNPNPMVGAVVVKNGTIVGEGYHKQYGG----PHAEVYAL 55 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 +YVTLEPC CA I I++ +P G Sbjct: 56 NEAGSEC-----RGATIYVTLEPCSHYGKTPPCAEKIIEMGIKKCVIACLDPNPLVAGRG 110 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + A E+ G+ E+ + ++ + F K Sbjct: 111 VKILERAG----IEVEVGLMEKEALELNRVFMK 139 >gi|46205243|ref|ZP_00209765.1| COG0590: Cytosine/adenosine deaminases [Magnetospirillum magnetotacticum MS-1] Length = 141 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 30/87 (34%), Positives = 47/87 (54%) Query: 13 EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72 E A P GAV V + ++I+RA NR D + HAE++A+R + L + L Sbjct: 1 ELALANVAEGGRPYGAVIVRDGEVIARAANRIHRTNDPSDHAEMVALRAASQRLGRPKLD 60 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLY 99 + +Y + PC MC AA+ LA +++ Y Sbjct: 61 DCIVYASGRPCPMCHAAMRLAGVKQGY 87 >gi|218264485|ref|ZP_03478318.1| hypothetical protein PRABACTJOHN_04018 [Parabacteroides johnsonii DSM 18315] gi|218221978|gb|EEC94628.1| hypothetical protein PRABACTJOHN_04018 [Parabacteroides johnsonii DSM 18315] Length = 354 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 24/161 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M +M+ +E A+ N P VGAV V KII +R AHAE+ Sbjct: 8 MVVEEKYMARCIELAR-GGEGNTAPNPMVGAVIVHKGKIIGEGFHRKCGE----AHAEVN 62 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ + + +L + +YV+LEPC CA I I R+ G +P Sbjct: 63 AV---ASVRDEALLRDSTIYVSLEPCSHYGKTPPCAELIIKKGIPRVVVGTLDPFPEVSG 119 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF--FK-ERR 149 G + A E+ G+ E+ +R + F F+ +R Sbjct: 120 RGVRMLREAG----VEVVTGVLEEEARTLNPAFMTFQIRKR 156 >gi|46204383|ref|ZP_00209388.1| COG0590: Cytosine/adenosine deaminases [Magnetospirillum magnetotacticum MS-1] Length = 111 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 32/100 (32%), Positives = 45/100 (45%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + A+ A ++ P GAV V + + NR + D TAHAE+ AIR C Sbjct: 7 DTAHLYRAVALAVDSVAHAGGPFGAVLVTADGQVFEGNNRVTQDNDPTAHAEVTAIRRAC 66 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L L LY + EPC MC A+ AR+ ++Y Sbjct: 67 AALGTFDLTGATLYSSCEPCPMCLASALWARVHAVHYATD 106 >gi|325276595|ref|ZP_08142337.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. TJI-51] gi|324098274|gb|EGB96378.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. TJI-51] Length = 376 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ VG V V + +++ + HAE+ A+R Sbjct: 9 DAHYMARALELARKGLFTTHPNPRVGCVIVRDGEVVGEGWHVRAGE----PHAEVHALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ +P G + Sbjct: 65 AG-----ERARGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGRGLR 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + F K Sbjct: 120 RLAEAG----IEVASGVLEAEARALNPGFLKR 147 >gi|294950861|ref|XP_002786810.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239901164|gb|EER18606.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 232 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 3/111 (2%) Query: 8 MSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+ A E P GA N+ ++ A N +D T HAE+ AIRM +L Sbjct: 1 MEAAVLSATTGVKLKEGGPFGACITRNDVVVCCAHNTFFSDRDPTCHAEMNAIRMAMHLL 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + L +Y + EPC MC AI + IR LY G + +NG ++ Sbjct: 61 KTDDLAGCVIYSSFEPCPMCWGAILASGIRLLYVGL--DRHTAAKNGVEYL 109 Score = 35.3 bits (81), Expect = 3.1, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 14/81 (17%) Query: 28 AVAV-LNNKIIS-------RAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 + V +NKII+ + + + + IR+ CR ++ L ++ Sbjct: 149 CIIVNKDNKIIADSSTPSIESFTDSVDTLM------VKTIRLACRAINSPYLQGCKIFTL 202 Query: 80 LEPCTMCAAAISLARIRRLYY 100 P AA A + L+Y Sbjct: 203 EAPDVESHAACLWALVDSLHY 223 >gi|283784233|ref|YP_003364098.1| riboflavin biosynthesis protein [Citrobacter rodentium ICC168] gi|282947687|emb|CBG87242.1| riboflavin biosynthesis protein [Citrobacter rodentium ICC168] Length = 367 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++M+ AL+ A + P VG V V + +I+ + HAE+ A+R Sbjct: 2 QDELYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGYHYRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGMARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ + + + F K R Sbjct: 113 YRLQQAG----IEVSHGLMMSEAEALNKGFLKRMR 143 >gi|190571227|ref|YP_001975585.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357499|emb|CAQ54935.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 405 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 25/153 (16%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + FMS AL+ A+ + + P VG + V N +I HAE++A Sbjct: 2 TDDYFMSIALKLAEKSL--GSVAPNPAVGCIIVKNGMVIGEGY----TGIGGRPHAEVVA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 ++ + +YVTLEPC C A I + I+R+ A +P Sbjct: 56 LQNAKDLTHS-----ATMYVTLEPCCHFGVTEPCTAEIIKSGIKRVVIAAIDPDSRVSGG 110 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A E+ GI ++ + + FF Sbjct: 111 GIKALKEAG----IEVEQGIMQKEAEVLNVGFF 139 >gi|323488255|ref|ZP_08093505.1| riboflavin biosynthesis protein RibD [Planococcus donghaensis MPA1U2] gi|323398113|gb|EGA90909.1| riboflavin biosynthesis protein RibD [Planococcus donghaensis MPA1U2] Length = 367 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 21/152 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + +M+ AL AQ + P VG+V V +N+I+ + HAEI A Sbjct: 1 MSNHDFYMNLALTNAQTLKGQTDPNPLVGSVIVNDNRIVGIGTHLKAGE----PHAEIHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 +RM + +YVTLEPC+ CA AI A I ++ +P N Sbjct: 57 LRMAGDMSQ-----GATIYVTLEPCSHFGRTGPCAQAIIDAGIEKVVIATLDPNPIVAGN 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ E+ + ++ + F Sbjct: 112 GVRMLKEAG----IEVIVGVREEEAIKMNEVF 139 >gi|114703609|emb|CAL46259.1| cytidine deaminase [Paspalum simplex] Length = 148 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 1/112 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + F+S A+EEA + P GAV V N++++ N + D TAHAE+ AIR Sbjct: 29 DRDHKFLSKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIR 88 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 C+ L + L + ++Y + EPC MC A+ L I+RL YG I Sbjct: 89 EACKKLGKIELSDCEIYASCEPCPMCFGAVYLFGIKRLVYGDKAEAAIAIGF 140 >gi|166030622|ref|ZP_02233451.1| hypothetical protein DORFOR_00288 [Dorea formicigenerans ATCC 27755] gi|166029624|gb|EDR48381.1| hypothetical protein DORFOR_00288 [Dorea formicigenerans ATCC 27755] Length = 377 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 54/151 (35%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+E A+ N P VGAV V + +II + HAE AI Sbjct: 4 TDQDYMKRAIELAKKGEGWTNPNPMVGAVIVKDGRIIGEGYHARCGEL----HAERNAI- 58 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E LYVTLEPC C AI +I+++ G+ +P G Sbjct: 59 ----ASLTESAEGATLYVTLEPCCHYGKTPPCTEAILEQKIKKVVIGSRDPNPKVAGKGA 114 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A + + ++ FF Sbjct: 115 KILRDAG----VAVVEDFMRDKCDELNPIFF 141 >gi|182417348|ref|ZP_02948682.1| riboflavin biosynthesis protein RibD [Clostridium butyricum 5521] gi|237668576|ref|ZP_04528560.1| riboflavin biosynthesis protein RibD [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378778|gb|EDT76300.1| riboflavin biosynthesis protein RibD [Clostridium butyricum 5521] gi|237656924|gb|EEP54480.1| riboflavin biosynthesis protein RibD [Clostridium butyricum E4 str. BoNT E BL5262] Length = 360 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 59/153 (38%), Gaps = 25/153 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M ALE A + P VGAV V +NK+I + AHAE A+ Sbjct: 2 DEFYMKRALELAIKGV--GMVNPNPMVGAVIVKDNKVIGEGFHEKYGH----AHAERNAV 55 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + E + +YVTLEPC C + ++R++ G +P Sbjct: 56 KNAV-----EDIEGATVYVTLEPCAHYGKTPPCVDLLIEKKVRKVVIGMLDPNPLVAGKS 110 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + E+ G+ E+ R++ + F K Sbjct: 111 IKKLKENN----IEVKVGVKEKECRKLNEVFIK 139 >gi|218289836|ref|ZP_03494036.1| riboflavin biosynthesis protein RibD [Alicyclobacillus acidocaldarius LAA1] gi|218240127|gb|EED07312.1| riboflavin biosynthesis protein RibD [Alicyclobacillus acidocaldarius LAA1] Length = 371 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + +M ALE A+ + P VGA+ V ++ + + T HAE+ A Sbjct: 1 MTEDERYMRMALEVARLGEGQTSPNPMVGAIVVNGGLVVGQGAHLMA----GTPHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM LYVTLEPC C AI + +RR+ A + Sbjct: 57 LRMAGDAA-----KGATLYVTLEPCNHHGRTPPCTDAILASGVRRVVVAALDVDPRTAGL 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A E+ G+ E +R++ + FF Sbjct: 112 GVKRLQDAGL----EVSVGVLEVEARELNRHFF 140 >gi|329122085|ref|ZP_08250693.1| riboflavin biosynthesis protein RibD [Dialister micraerophilus DSM 19965] gi|327466892|gb|EGF12408.1| riboflavin biosynthesis protein RibD [Dialister micraerophilus DSM 19965] Length = 378 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 21/154 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + + +MS AL+ A++ E P VGAV V N K++ ++ HAE+ A Sbjct: 3 INEDEKWMSHALDLAKHGYWYTETNPLVGAVLVKNGKVVGEGWHKKYGD----VHAEVNA 58 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + +E LYVTLEPC C + +++R+ +P Sbjct: 59 FKN-----CKENTEHATLYVTLEPCCHYGKTPPCLNLVLQKKVKRVVIAMKDPNPLVSGK 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + ++ G+ E + ++ + F K Sbjct: 114 SIKILKENG----IQVIVGVLENEAVKLNEIFIK 143 >gi|170719753|ref|YP_001747441.1| riboflavin biosynthesis protein RibD [Pseudomonas putida W619] gi|169757756|gb|ACA71072.1| riboflavin biosynthesis protein RibD [Pseudomonas putida W619] Length = 376 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 58/152 (38%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ + P VG V V + +++ + HAE+ A+R Sbjct: 9 DAHYMARALELARKGIYTTHPNPRVGCVIVRDGEVVGEGWHVRAGE----PHAEVHALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ +P G + Sbjct: 65 AG-----ERARGACAYVTLEPCSHHGRTPPCAEALVQAGVARVVAAMQDPNPQVAGQGLR 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E ++R + F K Sbjct: 120 RLAEAG----IEVASGVLEAQARALNPGFLKR 147 >gi|261822528|ref|YP_003260634.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Pectobacterium wasabiae WPP163] gi|261606541|gb|ACX89027.1| riboflavin biosynthesis protein RibD [Pectobacterium wasabiae WPP163] Length = 369 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 57/157 (36%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + +M+ ALE A+ P VG V V + +I+ + HAE+ A Sbjct: 1 MPQDAFYMARALELARRGRFTTAPNPNVGCVIVRDGEIVGEGYHFRAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM E YVTLEPC CA A+ A + R+ +P Sbjct: 57 LRMAG-----ERARGATAYVTLEPCSHHGRTPPCADALIAAGVSRVVAAMQDPNPQVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + + G+ + ++ F K R Sbjct: 112 GLHRLQQSG----ITVSHGVMMAEAEKVNVGFLKRMR 144 >gi|269103255|ref|ZP_06155952.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163153|gb|EEZ41649.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Photobacterium damselae subsp. damselae CIP 102761] Length = 378 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+ A+ P VG V V N +I+ + L HAE+ A+R Sbjct: 6 DHKMMSRAIALAKKGRFTTAPNPNVGCVIVNNGQIVGEGFHYRAGL----PHAEVFALRA 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ A I R+ +P NG Sbjct: 62 AGDKA-----RGATAYVTLEPCSHYGRTPPCALALIEAGISRVVCAMVDPNPKVAGNGVT 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + + G+ EQ ++ + F K Sbjct: 117 LLQ----NAGVTVEVGLLEQDAKALNLGFIKA 144 >gi|117620375|ref|YP_856166.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561782|gb|ABK38730.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 167 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 3/110 (2%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 ++ AL+ A + + P A+ V +N++++ A N + D T HAE+ A+R Sbjct: 22 SHQEWLEQALQLALHNRRQGGRPFAALLVRDNQLVTSAVNAMHQDGDPTRHAELEALRQA 81 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++ L +Y + PC MC +A+ + I +YY N Sbjct: 82 SQVGP---LAGAIVYASGHPCPMCLSALVMNGIAAVYYAFDNEDAAPFGF 128 >gi|254787586|ref|YP_003075015.1| riboflavin biosynthesis protein RibD [Teredinibacter turnerae T7901] gi|237683563|gb|ACR10827.1| riboflavin biosynthesis protein RibD [Teredinibacter turnerae T7901] Length = 363 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 VFM AL A+ P VG V V + +I + HAE+ A++ Sbjct: 7 DTVFMQQALRLAEEGLNTT-TPNPRVGCVLVKDGVVIGEGYHHRAGE----PHAEVNALK 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 ++ ++ L YVTLEPC+ CA A+ A I RL Y +P G Sbjct: 62 S---VIDRQQLAGATAYVTLEPCSHTGKTGPCADALVDAGIGRLVYAMEDPNPLVAGRGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + + E+ + + F K R Sbjct: 119 DKLQRAG----VVVDGPLLEEEALSLNLGFVKRMR 149 >gi|330830923|ref|YP_004393875.1| pyrimidine deaminase/reductase RibD [Aeromonas veronii B565] gi|328806059|gb|AEB51258.1| Pyrimidine deaminase/reductase RibD [Aeromonas veronii B565] Length = 369 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 57/156 (36%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +MS ALE A+ P VGAV V + ++ ++ HAE+ A+ Sbjct: 4 QDDYQWMSRALELARRGRYTTAPNPCVGAVLVKDGVVVGEGWHQKAGE----PHAEVYAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + YVTLEPC CA A+ A + R+ +P G Sbjct: 60 RAAG-----DNARGATAYVTLEPCSHHGRTPPCAEALINAGVARVVAAMVDPNPQVGGRG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + A G+ + + FFK R Sbjct: 115 LRMLSEAGIKTDF----GLLASEAEALNPGFFKRMR 146 >gi|326390344|ref|ZP_08211903.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter ethanolicus JW 200] gi|325993621|gb|EGD52054.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter ethanolicus JW 200] Length = 360 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 21/148 (14%) Query: 5 NVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL+ A+ N P VGAV V N KII + HAE+ A++ Sbjct: 2 EEYMKRALKLAEKGWGYTNPNPLVGAVIVKNGKIIGEGYHEYFGG----PHAEVNALKNA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 E + ++VTLEPC C I + I+R+Y +P N + Sbjct: 58 V-----EDVKGSTMFVTLEPCSHYGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNSIKR 112 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ +R++ + F Sbjct: 113 LKEAG----IEVQVGMMEKEARKLNEIF 136 >gi|167031576|ref|YP_001666807.1| riboflavin biosynthesis protein RibD [Pseudomonas putida GB-1] gi|166858064|gb|ABY96471.1| riboflavin biosynthesis protein RibD [Pseudomonas putida GB-1] Length = 376 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ VG V V + +++ + HAE+ A+R Sbjct: 9 DAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGE----PHAEVHALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ +P G Q Sbjct: 65 AG-----ERAIGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLQ 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + F K Sbjct: 120 RLAEAG----IEVASGVLETEARALNPGFLKR 147 >gi|71423764|ref|XP_812564.1| deaminase [Trypanosoma cruzi strain CL Brener] gi|70877358|gb|EAN90713.1| deaminase, putative [Trypanosoma cruzi] Length = 202 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 31/174 (17%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-------------LNNK-----------IISRA 40 + FM A EA+ A E+PVG V V +N I +R Sbjct: 14 DAFMLAAFAEARAALAEGEVPVGCVLVPAEATCPANAGRLDDNNPNNSGASLGSLIAARG 73 Query: 41 GNRNRELKDVTAHAEILA----IRMGCRILSQE--ILPEVDLYVTLEPCTMCAAAISLAR 94 N + AHAE +A +R + L LYV +EPC MCAA + R Sbjct: 74 RNATNKEHHALAHAEFVAVEALLRDAAEKGRKPPASLAGYVLYVVVEPCIMCAAMLLYNR 133 Query: 95 IRRLYYGASNPKGGGIENGTQFYTLATCH-HSPEIYPGISEQRSRQIIQDFFKE 147 I+++Y+G NP+ GG + + + E G + + ++Q+F+ Sbjct: 134 IKKVYFGCGNPRFGGNGTVLAVHAAKSTSAPAYESCGGHRAEEAIALLQEFYSR 187 >gi|258651669|ref|YP_003200825.1| cytosine deaminase [Nakamurella multipartita DSM 44233] gi|258554894|gb|ACV77836.1| Cytosine deaminase [Nakamurella multipartita DSM 44233] Length = 153 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 12/146 (8%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +++ A+ A+ IP+GA +++ +++ N+ +L H E + Sbjct: 7 DADYLAAAVRAARQGLAEGGIPIGAALIVDGGVLATGWNKRVQLGSAIRHGETDCLENAG 66 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R+ + + + TL PC MC AI L +I R+ G + GG E Sbjct: 67 RLPAT-VYARSVMVTTLSPCDMCTGAILLYKIPRVIVGENQTFYGGEE----LLRARG-- 119 Query: 124 HSPEIYPGISEQ-RSRQIIQDFFKER 148 E+ + + ++ F +R Sbjct: 120 --VEVT--VLDDPECVAMMTAFIADR 141 >gi|71652572|ref|XP_814939.1| deaminase [Trypanosoma cruzi strain CL Brener] gi|70879957|gb|EAN93088.1| deaminase, putative [Trypanosoma cruzi] Length = 202 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 31/174 (17%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-------------LNNK-----------IISRA 40 + FM A EA+ A E+PVG V V +N I +R Sbjct: 14 DAFMLAAFAEARAALAEGEVPVGCVLVPAEASCPANAGRLDDNNSNNSEASLGSLIAARG 73 Query: 41 GNRNRELKDVTAHAEILA----IRMGCRILSQE--ILPEVDLYVTLEPCTMCAAAISLAR 94 N + AHAE +A +R + L LYV +EPC MCAA + R Sbjct: 74 RNATNKEHHALAHAEFVAVEALLRDAAEKGRKPPASLAGYVLYVVVEPCIMCAAMLLYNR 133 Query: 95 IRRLYYGASNPKGGGIENGTQFYTLATCH-HSPEIYPGISEQRSRQIIQDFFKE 147 I+++Y+G NP+ GG + + + E G + + ++Q+F+ Sbjct: 134 IKKVYFGCGNPRFGGNGTVLAVHAAKSTSAPAYESCGGHRAEEAIALLQEFYSR 187 >gi|223041905|ref|ZP_03612090.1| riboflavin biosynthesis protein [Actinobacillus minor 202] gi|223017259|gb|EEF15686.1| riboflavin biosynthesis protein [Actinobacillus minor 202] Length = 364 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 22/153 (14%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + +M+ A+ A+ A N P VG V V N++I++ + HAE A Sbjct: 1 MTDFD-YMARAIALAEKARGWTNPNPLVGCVIVKNDEILAEGYHERIGG----WHAERNA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + S L YVTLEPC C+ + I +++ G+ +P Sbjct: 56 I-----LNSSADLRGATAYVTLEPCCHHGRTPPCSDLLIERGISKVFIGSRDPNPLVSGK 110 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A E+ + ++ FF Sbjct: 111 GVKQLQDAG----IEVVTDFMREECDRLNPIFF 139 >gi|15924761|ref|NP_372295.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus Mu50] gi|15927345|ref|NP_374878.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus N315] gi|148268246|ref|YP_001247189.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus JH9] gi|150394314|ref|YP_001316989.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus JH1] gi|156980087|ref|YP_001442346.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus Mu3] gi|253315858|ref|ZP_04839071.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006556|ref|ZP_05145157.2| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794151|ref|ZP_05643130.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9781] gi|258420684|ref|ZP_05683623.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9719] gi|258438334|ref|ZP_05689618.1| riboflavin specific deaminase [Staphylococcus aureus A9299] gi|258443792|ref|ZP_05692131.1| riboflavin specific deaminase [Staphylococcus aureus A8115] gi|258446003|ref|ZP_05694179.1| riboflavin specific deaminase [Staphylococcus aureus A6300] gi|258448269|ref|ZP_05696396.1| riboflavin specific deaminase [Staphylococcus aureus A6224] gi|258454203|ref|ZP_05702174.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A5937] gi|282893262|ref|ZP_06301496.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8117] gi|282927897|ref|ZP_06335508.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A10102] gi|295406080|ref|ZP_06815888.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8819] gi|296276038|ref|ZP_06858545.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus MR1] gi|297244995|ref|ZP_06928872.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8796] gi|13701564|dbj|BAB42857.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus N315] gi|14247543|dbj|BAB57933.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus Mu50] gi|147741315|gb|ABQ49613.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus aureus subsp. aureus JH9] gi|149946766|gb|ABR52702.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus JH1] gi|156722222|dbj|BAF78639.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus Mu3] gi|257788123|gb|EEV26463.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9781] gi|257843288|gb|EEV67698.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9719] gi|257848378|gb|EEV72369.1| riboflavin specific deaminase [Staphylococcus aureus A9299] gi|257851198|gb|EEV75141.1| riboflavin specific deaminase [Staphylococcus aureus A8115] gi|257855245|gb|EEV78184.1| riboflavin specific deaminase [Staphylococcus aureus A6300] gi|257858508|gb|EEV81384.1| riboflavin specific deaminase [Staphylococcus aureus A6224] gi|257863655|gb|EEV86412.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A5937] gi|282590407|gb|EFB95486.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A10102] gi|282764580|gb|EFC04706.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8117] gi|285817450|gb|ADC37937.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Staphylococcus aureus 04-02981] gi|294969077|gb|EFG45098.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8819] gi|297178075|gb|EFH37323.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8796] gi|315130592|gb|EFT86578.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus CGS03] gi|329727599|gb|EGG64055.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus 21172] Length = 347 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%) Query: 5 NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 2 SQFMDYAIQLANMVQGQTGVNPPVGAVVVNEGRIVGIGAHLRKGDK----HAEVQALDMA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 Q+ +Y+TLEPC C I +I ++ Y + N Sbjct: 58 -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 105 Query: 117 YTLATCH-HSPEIYPGISEQRSRQIIQDFFKER 148 + T H E+ + ++R+ Q+ QDFFK + Sbjct: 106 HGDETLRAHGIEVEC-VDDERASQLYQDFFKAK 137 >gi|269138330|ref|YP_003295030.1| riboflavin biosynthesis protein RibD [Edwardsiella tarda EIB202] gi|267983990|gb|ACY83819.1| riboflavin biosynthesis protein RibD [Edwardsiella tarda EIB202] gi|304558362|gb|ADM41026.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Edwardsiella tarda FL6-60] Length = 373 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 55/155 (35%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ A E A+ P VG V V +++I+ + HAE+ A+R Sbjct: 8 SDEFYMARAFELARRGRFTTTPNPNVGCVLVRDDRIVGEGFHLRAGE----PHAEVHALR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + YVTLEPC CA A+ A + R+ +P G Sbjct: 64 MAGELA-----RGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPHVAGRGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + I + F K R Sbjct: 119 YRLQQAG----ISVRHGVMLAEAEAINKGFLKRMR 149 >gi|325860399|ref|ZP_08173511.1| riboflavin biosynthesis protein RibD [Prevotella denticola CRIS 18C-A] gi|325482057|gb|EGC85078.1| riboflavin biosynthesis protein RibD [Prevotella denticola CRIS 18C-A] Length = 380 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 18/152 (11%) Query: 2 KKGNVFMSCALEEAQNA--ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58 + ++M L+ A+N + VGAV V + +II + H+E+ A Sbjct: 5 ETDEIYMRRCLQLARNGQQLAKPNPMVGAVIVSKDGRIIGEGYHVRCGEG----HSEVNA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 R + +L E +YV+LEPC CA I +RR+ G +P Sbjct: 61 F-ASVRKEDEALLHEATVYVSLEPCSHYGKTPPCADLIISKGVRRVVCGCIDPFSKVQGR 119 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A ++ G+ E+ ++ + F Sbjct: 120 GVKRLREAG----IDVTVGVLEKECLELNKRF 147 >gi|313673619|ref|YP_004051730.1| riboflavin biosynthesis protein ribd [Calditerrivibrio nitroreducens DSM 19672] gi|312940375|gb|ADR19567.1| riboflavin biosynthesis protein RibD [Calditerrivibrio nitroreducens DSM 19672] Length = 385 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 62/152 (40%), Gaps = 23/152 (15%) Query: 8 MSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A++ A VGAV V N K+I R + HAEI A+ Sbjct: 8 MDEAIQLALMGKGYNYTNPIVGAVVVKNGKVIGRGYHT--GFGMP--HAEIEAL-----K 58 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +E DLYVTLEPC C AI + I+R++ G +P + Sbjct: 59 DCEESPEGGDLYVTLEPCSTTGKTPPCTDAIIKSGIKRVFIGVVDPNPNHSGKAIKILND 118 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF--FKERR 149 A E++ G +E +II+DF F +R Sbjct: 119 AG----IEVFLGFNEHVCAEIIEDFTKFILKR 146 >gi|239993720|ref|ZP_04714244.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii ATCC 27126] Length = 379 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 18/155 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILA 58 K +M+ A++ AQ + P VG V V NN+++ + + ++ T HAE+ A Sbjct: 7 KNDYFWMAKAIQLAQQGRFTTSPNPRVGCVIVDENNQLLGQGYH----IQAGTPHAEVHA 62 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R Q YVTLEPC CA A+ A++ R+ ++P N Sbjct: 63 LRHASNARPQGA-KGATAYVTLEPCSHFGRTPPCAVALVEAKVARVVIAMTDPNPNVCGN 121 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G A E+ + + + F K Sbjct: 122 GISILQEAG----IEVVSEVMAAEAAALNPGFIKR 152 >gi|241667512|ref|ZP_04755090.1| pyrimidine reductase/pyrimidine deaminase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876058|ref|ZP_05248768.1| pyrimidine reductase/pyrimidine deaminase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842079|gb|EET20493.1| pyrimidine reductase/pyrimidine deaminase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 356 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 59/154 (38%), Gaps = 22/154 (14%) Query: 1 MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MK N +M AL A L VG + V N IIS + AHAEI Sbjct: 1 MKNIENYYMQQALTLANRGRLSVSPNPMVGCIIVKNGAIISEGWHEAVGE----AHAEIY 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A++ YVTLEPC C A+ A I+++ +P Sbjct: 57 ALKKAGDKA-----KGATAYVTLEPCCHHGRTPPCTDALIRAGIQKVVVATLDPNPLVAG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G Q A E+ GI ++++++ + FF Sbjct: 112 KGIQKLKDAG----IEVKVGILQKQAQEQNKIFF 141 >gi|167626935|ref|YP_001677435.1| pyrimidine reductase/pyrimidine deaminase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596936|gb|ABZ86934.1| pyrimidine reductase/pyrimidine deaminase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 356 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 59/154 (38%), Gaps = 22/154 (14%) Query: 1 MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MK N +M AL A L VG + V N IIS + AHAEI Sbjct: 1 MKNIENYYMQQALTLANRGRLSVSPNPMVGCIIVKNGAIISEGWHEAVGE----AHAEIY 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A++ YVTLEPC C A+ A I+++ +P Sbjct: 57 ALKKAGDKA-----KGATAYVTLEPCCHHGRTPPCTDALIRAGIQKVVVATLDPNPLVAG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G Q A E+ GI ++++++ + FF Sbjct: 112 KGIQKLKDAG----IEVKVGILQKQAQEQNKIFF 141 >gi|152968939|ref|YP_001334048.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150953788|gb|ABR75818.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/ 5-amino-6-(5-phosphoribosylamino) uracil reductase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 367 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++M+ AL+ A + P VG V V + +I+ + HAE+ A+R Sbjct: 2 QDEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----RGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ + + + F K R Sbjct: 113 YRLQQAG----IEVSHGLMMNEAEALNKGFLKRMR 143 >gi|269469107|gb|EEZ80655.1| pyrimidine deaminase [uncultured SUP05 cluster bacterium] Length = 350 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 21/154 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 K + +M+ AL+ A P VG V V +++II++ ++ AH EI A+ Sbjct: 7 KNDSHYMAIALKLANEGRYGVGANPMVGCVIVKDDQIIAKGYHQTFGE----AHGEINAL 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + YVTLEPC CA AI + +++ +P G Sbjct: 63 KQ-----IDHQAHGATFYVTLEPCSHQGKTPPCAQAIIDSGAKKVIIALLDPNPLVSGKG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + E+ G+ E ++ ++ + F K Sbjct: 118 MAMLE----NSGIEVITGLMENKALELNRGFVKR 147 >gi|182415465|ref|YP_001820531.1| riboflavin biosynthesis protein RibD [Opitutus terrae PB90-1] gi|177842679|gb|ACB76931.1| riboflavin biosynthesis protein RibD [Opitutus terrae PB90-1] Length = 389 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 24/149 (16%) Query: 2 KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 FM ALE A+ + P VGA+ V ++++ + +D HAE L Sbjct: 7 NNHETFMRRALEVARKGW--GDTHPNPMVGALIVEEGRVVAEGFHA----QDGGPHAERL 60 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 A+ + +YVTLEPC+ C AI + I+++ GA++P Sbjct: 61 ALLN----RGKPPRAGATMYVTLEPCSTSGRTGACTDAIISSGIKQVVVGATDPNPEHSG 116 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQI 140 G + A E+ G+ E+ + Sbjct: 117 KGFEVLRAAG----VEVIHGVLERECTDL 141 >gi|228954395|ref|ZP_04116421.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228805327|gb|EEM51920.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 373 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 26/162 (16%) Query: 1 MKK--GNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 MKK +M AL+ A+ + + P VGAV V + I+ + + HAE+ Sbjct: 1 MKKMTDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++M + + +YVTLEPC C + ++R+ + Sbjct: 57 HALQMAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVS 111 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 NG + A E+ G+ E + + + FF K +R Sbjct: 112 GNGKRRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 149 >gi|315504158|ref|YP_004083045.1| cmp/dcmp deaminase zinc-binding protein [Micromonospora sp. L5] gi|315410777|gb|ADU08894.1| CMP/dCMP deaminase zinc-binding protein [Micromonospora sp. L5] Length = 141 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 1/106 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ A+E A A E P ++ V + ++ N KDVTAH E+ R Sbjct: 4 DDEAFLRRAVELADRAGASGERPFASLLVGADGTVLIEDHNTVVSDKDVTAHPELKLARW 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 R L+ E +Y + +PC MC AI+ + + R+ Y S + Sbjct: 64 AARQLAPEAAVATTMYTSCQPCPMCTVAINASGLGRVVYALSTEQF 109 >gi|205374673|ref|ZP_03227467.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil [Bacillus coahuilensis m4-4] Length = 377 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 21/151 (13%) Query: 2 KKGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M+ A++ A+ + + P VGAV V + +I+ + HAEI A+ Sbjct: 5 QSHEFYMNMAIQNAKVMSGQTSPNPLVGAVIVRDGEIVGFGAHMKAGE----PHAEIHAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 RM +YVTLEPC+ CA A+ A I + +P NG Sbjct: 61 RMAGDKA-----KGATIYVTLEPCSHYGRTGPCAVALIEAGITNVVVATLDPNPIVAGNG 115 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A ++ G+ E ++++ + F Sbjct: 116 VRILEDAG----IKVITGVMEAEAKRMNEVF 142 >gi|257453179|ref|ZP_05618478.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Fusobacterium sp. 3_1_5R] gi|317059713|ref|ZP_07924198.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium sp. 3_1_5R] gi|313685389|gb|EFS22224.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium sp. 3_1_5R] Length = 359 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 61/152 (40%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M ALE A++ R N P VGAV V N KII + + HAE+ A++ Sbjct: 2 EDLEYMHLALELAKHGEGRVNPNPLVGAVVVKNGKIIGKGYHHEYGG----PHAEVFALQ 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E +YVTLEPC CA I + I+R +P G Sbjct: 58 EAG-----EEAKGATIYVTLEPCSHYGKTPPCAKKIIDSGIKRCVISMGDPNPLVAGKGI 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ G+ E +R + + F K Sbjct: 113 SMMRDAG----IEVEIGLCETEARALNRVFLK 140 >gi|73748880|ref|YP_308119.1| riboflavin biosynthesis protein RibD [Dehalococcoides sp. CBDB1] gi|147669641|ref|YP_001214459.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Dehalococcoides sp. BAV1] gi|73660596|emb|CAI83203.1| riboflavin biosynthesis protein RibD [Dehalococcoides sp. CBDB1] gi|146270589|gb|ABQ17581.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Dehalococcoides sp. BAV1] Length = 365 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 25/151 (16%) Query: 6 VFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +MS AL A+ A ++ P VGAV V N +++ + + D HAEI+A++ Sbjct: 2 KYMSQALSLAKLA--IGQVSPNPSVGAVIVKNGEVVGQGFTQP-PGGD---HAEIVALKQ 55 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 LYVTLEPC C ++ + I+ +Y + G + Sbjct: 56 AAEKA-----KGATLYVTLEPCCHQGRTPPCTGSVIASGIKEVYIATLDDNPLVSGKGKK 110 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A +++ G+ E+ +RQ+ + +FK Sbjct: 111 ELEDAG----IKVHLGMMEREARQMNEAYFK 137 >gi|331088370|ref|ZP_08337289.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium 3_1_46FAA] gi|330408614|gb|EGG88080.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium 3_1_46FAA] Length = 375 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A++ A+ N P VGAV V + KII ++ HAE AI Sbjct: 2 TDQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGKIIGEGYHKKYGEL----HAERNAI- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E +YVTLEPC C AI +IR++ G+ +P G Sbjct: 57 ----ASLTESAEGAVIYVTLEPCCHHGKTPPCTEAIIEQKIRKVVIGSRDPNPKVAGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 Q A + + Q+ FF Sbjct: 113 QMLREAG----VTVVEDFMREECDQLNPVFF 139 >gi|312883784|ref|ZP_07743503.1| riboflavin-specific deaminase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368533|gb|EFP96066.1| riboflavin-specific deaminase [Vibrio caribbenthicus ATCC BAA-2122] Length = 365 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 61/155 (39%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + MS AL+ A+ P VG V V + ++ + HAE+ A++ Sbjct: 5 EDHTHMSRALKLAELGKYTTAPNPRVGCVIVKDGLVVGEGFHYRAGE----PHAEVHALQ 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 +E +YVTLEPC CA A+ A++ R+ +P G Sbjct: 61 AA-----KERAIGATVYVTLEPCSHYGRTPPCAEALIKAKVGRVVCAMQDPNTLVSGRGI 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 Q A E+ G+ EQ + + + F K R Sbjct: 116 QMLRSAG----IEVDVGLLEQDALDLNRAFIKTMR 146 >gi|238893351|ref|YP_002918085.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Klebsiella pneumoniae NTUH-K2044] gi|262042437|ref|ZP_06015597.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|238545667|dbj|BAH62018.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/ 5-amino-6-(5-phosphoribosylamino) uracil reductase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259040212|gb|EEW41323.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 367 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++M+ AL+ A + P VG V V + +I+ + HAE+ A+R Sbjct: 2 QDEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----RGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ + + + F K R Sbjct: 113 YRLQQAG----IEVSHGLMMNEAEALNKGFLKRMR 143 >gi|229081368|ref|ZP_04213871.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock4-2] gi|228701990|gb|EEL54473.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock4-2] Length = 373 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 26/162 (16%) Query: 1 MKK--GNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 MKK +M AL+ A+ + + P VGAV V + I+ + + HAE+ Sbjct: 1 MKKMTDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++M + + +YVTLEPC C + ++R+ + Sbjct: 57 HALQMAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVS 111 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 NG + A E+ G+ E + + + FF K +R Sbjct: 112 GNGKRRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 149 >gi|328952293|ref|YP_004369627.1| riboflavin biosynthesis protein RibD [Desulfobacca acetoxidans DSM 11109] gi|328452617|gb|AEB08446.1| riboflavin biosynthesis protein RibD [Desulfobacca acetoxidans DSM 11109] Length = 362 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 55/148 (37%), Gaps = 21/148 (14%) Query: 8 MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+ A VGAV V + I+ R +R HAE+ A+R Sbjct: 1 MALALKLAARGVGCTSPNPMVGAVVVRDGYIVGRGYHRRYGG----PHAEVEALRQAGSQ 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 LYVTLEPC C AI A IRR+ S+P G + Sbjct: 57 A-----DGATLYVTLEPCNHYGQTPPCTEAILAAGIRRVVIANSDPNPHVAGGGAAYLQS 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + G+ + ++ + FFK Sbjct: 112 KGLL----VQSGLLAKAGSRLNEAFFKA 135 >gi|326335510|ref|ZP_08201697.1| riboflavin biosynthesis protein RibD [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692276|gb|EGD34228.1| riboflavin biosynthesis protein RibD [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 360 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 60/161 (37%), Gaps = 24/161 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M +M L A+ A P VG+V V KII + HAE+ Sbjct: 3 MIIDEKYMQRCLFLARKAMGYT-YPNPLVGSVIVHQGKIIGEGWHTKAGE----PHAEVN 57 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AI + + +L E LYV LEPC CA I I R+ G ++ Sbjct: 58 AITS---VRDKSLLKESTLYVNLEPCVHFGKTPPCADLIIEKGIPRIVIGCTDIYSKVAG 114 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 G Q A E+ + EQ S+ + FF ++R Sbjct: 115 KGIQRLQQAGR----EVVLDVLEQESQALNIRFFTFHSQKR 151 >gi|224370210|ref|YP_002604374.1| RibD [Desulfobacterium autotrophicum HRM2] gi|223692927|gb|ACN16210.1| RibD [Desulfobacterium autotrophicum HRM2] Length = 381 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 43/151 (28%), Positives = 60/151 (39%), Gaps = 21/151 (13%) Query: 2 KKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 N FM A+ A+ VGAV V NN+++ + + AHAE+ AI Sbjct: 15 TTHNSFMEQAICLAEQGRGYTAPNPMVGAVVVKNNQVVGQGWH----KGPGLAHAEVNAI 70 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + DLYVTLEPC C I A IRR++ G +P G Sbjct: 71 DDAGDLA-----RGSDLYVTLEPCNHTGRTPPCTEKILRAGIRRVFVGTEDPNPFVAGGG 125 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 +F + GI + S +I+DF Sbjct: 126 IKFLKERG----VAVKVGICRRASETLIEDF 152 >gi|153814754|ref|ZP_01967422.1| hypothetical protein RUMTOR_00969 [Ruminococcus torques ATCC 27756] gi|145847785|gb|EDK24703.1| hypothetical protein RUMTOR_00969 [Ruminococcus torques ATCC 27756] Length = 395 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A++ A+ N P VGAV V + KII ++ HAE AI Sbjct: 22 TDQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGKIIGEGYHKKYGEL----HAERNAI- 76 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E +YVTLEPC C AI +IR++ G+ +P G Sbjct: 77 ----ASLTESAEGAVIYVTLEPCCHHGKTPPCTEAIIEQKIRKVVIGSRDPNPKVAGKGV 132 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 Q A + + Q+ FF Sbjct: 133 QMLREAG----VTVVEDFMREECDQLNPVFF 159 >gi|330006909|ref|ZP_08305781.1| riboflavin biosynthesis protein RibD [Klebsiella sp. MS 92-3] gi|328535663|gb|EGF62112.1| riboflavin biosynthesis protein RibD [Klebsiella sp. MS 92-3] Length = 367 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++M+ AL+ A + P VG V V + +I+ + HAE+ A+R Sbjct: 2 QDEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----RGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ + + + F K R Sbjct: 113 YRLQQAG----IEVSHGLMMNEAEALNKGFLKRMR 143 >gi|70732823|ref|YP_262590.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens Pf-5] gi|68347122|gb|AAY94728.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens Pf-5] Length = 377 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 58/152 (38%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ + P VG V V + +++ + HAE+ A+R Sbjct: 11 DAHYMARALELARKGRYSTHPNPRVGCVIVRDGQVVGEGWHVRAGE----PHAEVHALRA 66 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P G Q Sbjct: 67 AGELA-----RGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQ 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + + G+ E +R I + F K Sbjct: 122 RLAQAG----IDTHGGVLEGEARAINKGFLKR 149 >gi|237730390|ref|ZP_04560871.1| riboflavin bifunctional biosynthesis protein ribD [Citrobacter sp. 30_2] gi|226905929|gb|EEH91847.1| riboflavin bifunctional biosynthesis protein ribD [Citrobacter sp. 30_2] Length = 367 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++M+ AL+ A + P VG V V + +I+ + HAE+ A+R Sbjct: 2 QDELYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKAQ-----GATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEVEQLNKGFLKRMR 143 >gi|145299654|ref|YP_001142495.1| cytidine/deoxycytidylate deaminase [Aeromonas salmonicida subsp. salmonicida A449] gi|142852426|gb|ABO90747.1| cytidine/deoxycytidylate deaminase [Aeromonas salmonicida subsp. salmonicida A449] Length = 172 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 3/110 (2%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 ++ AL+ A R P A+ V N+++++ A N D T HAE+ A+R Sbjct: 22 SHQEWLEQALQLALQNRQRGGRPFAALLVQNDRLVAGAVNAMHLEGDPTRHAELEALRQA 81 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 + L +Y + PC MC +A+ + IR +YY N Sbjct: 82 SQSGP---LAGAIIYASGHPCPMCLSALVMNGIRAVYYAFDNHDAAPFGF 128 >gi|315125800|ref|YP_004067803.1| riboflavin biosynthesis protein [Pseudoalteromonas sp. SM9913] gi|315014314|gb|ADT67652.1| riboflavin biosynthesis protein [Pseudoalteromonas sp. SM9913] Length = 375 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 60/155 (38%), Gaps = 23/155 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + +M+ A+E A+ P VG V V NNKII +R HAE+ A Sbjct: 9 EDDKRYMARAIELAKKGRFTT-TPNPNVGCVLVKNNKIIGEGFHRLAGQG----HAEVNA 63 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + M E YVTLEPC CA + A ++++ + Sbjct: 64 LTMAG-----ENAKGATAYVTLEPCSHYGRTPPCAEGLKAAGVKKVIAAMVDSNPQVAGK 118 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G + A E+ G+ E ++R + FFK Sbjct: 119 GLKILADAG----IEVAYGLLEAQARALNFGFFKR 149 >gi|304383732|ref|ZP_07366191.1| riboflavin biosynthesis protein RibD [Prevotella marshii DSM 16973] gi|304335256|gb|EFM01527.1| riboflavin biosynthesis protein RibD [Prevotella marshii DSM 16973] Length = 315 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 55/151 (36%), Gaps = 17/151 (11%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M L+ A+ VGAV V+ N+II + AHAE+ A Sbjct: 5 TTDEKYMRRCLQLAECGRENAKPNPMVGAVIVVENRIIGEGYHVRYGE----AHAEVNAF 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 C + +LP LYV+LEPC C I + R+ G +P G Sbjct: 61 ASICPKDAA-LLPSATLYVSLEPCAHQGKTPPCTRLIIEKGVGRVVVGCIDPFAKVQGRG 119 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ E + + F Sbjct: 120 IRMLQEAG----IEVTLGVLEAECLALNRRF 146 >gi|300769800|ref|ZP_07079680.1| riboflavin biosynthesis protein RibD [Sphingobacterium spiritivorum ATCC 33861] gi|300763251|gb|EFK60067.1| riboflavin biosynthesis protein RibD [Sphingobacterium spiritivorum ATCC 33861] Length = 350 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 44/162 (27%), Positives = 61/162 (37%), Gaps = 23/162 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M +M LE A A + P VGAV V NKII HAE+ Sbjct: 1 MNMQERYMQRCLELALLGA--GTVSPNPMVGAVIVHENKIIGEGYTSPYGG----PHAEV 54 Query: 57 LAIRMGCRILS---QEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKG 107 AI+ +L E D+YV+LEPC CA I +R++Y +P Sbjct: 55 NAIQQVKDQYPDSADRLLEESDMYVSLEPCAHFGKTPPCANLIVKHNLRKVYIACMDPFA 114 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A E+ G+ E+ + + + FF R Sbjct: 115 QVNGKGLGILQEAG----IEVEVGLLEKEALWLNRRFFTRVR 152 >gi|295108673|emb|CBL22626.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Ruminococcus obeum A2-162] Length = 375 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A++ A+ N P VGAV V + KII ++ HAE AI Sbjct: 2 TDQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGKIIGEGYHKKYGEL----HAERNAI- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E +YVTLEPC C AI +IR++ G+ +P G Sbjct: 57 ----ASLTESAEGAVIYVTLEPCCHHGKTPPCTEAIIEQKIRKVVIGSRDPNPKVAGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 Q A + + Q+ FF Sbjct: 113 QMLREAG----VTVVEDFMREECDQLNPVFF 139 >gi|153811505|ref|ZP_01964173.1| hypothetical protein RUMOBE_01897 [Ruminococcus obeum ATCC 29174] gi|317501334|ref|ZP_07959537.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium 8_1_57FAA] gi|149832246|gb|EDM87331.1| hypothetical protein RUMOBE_01897 [Ruminococcus obeum ATCC 29174] gi|316897298|gb|EFV19366.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium 8_1_57FAA] Length = 395 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A++ A+ N P VGAV V + KII ++ HAE AI Sbjct: 22 TDQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGKIIGEGYHKKYGEL----HAERNAI- 76 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E +YVTLEPC C AI +IR++ G+ +P G Sbjct: 77 ----ASLTESAEGAVIYVTLEPCCHHGKTPPCTEAIIEQKIRKVVIGSRDPNPKVAGKGV 132 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 Q A + + Q+ FF Sbjct: 133 QMLREAG----VTVVEDFMREECDQLNPVFF 159 >gi|237809265|ref|YP_002893705.1| riboflavin biosynthesis protein RibD [Tolumonas auensis DSM 9187] gi|237501526|gb|ACQ94119.1| riboflavin biosynthesis protein RibD [Tolumonas auensis DSM 9187] Length = 370 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 60/155 (38%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +++MS AL+ A+ + P VG V V + +I+ + HAE+ A+R Sbjct: 5 EDHLYMSRALQLAEQGRFTTSPNPNVGCVIVADGRIVGEGFHLRAGE----PHAEVHALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC CA A+ A + R+ +P G Sbjct: 61 MAGDKA-----RGATAYVTLEPCSHFGRTPPCADALVNAGVARVVAAMEDPNPQVSGRGM 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + A I G+ + ++ + F K R Sbjct: 116 RRLADAG----VTIQTGLLQAQAEALNPGFIKRMR 146 >gi|253989703|ref|YP_003041059.1| hypothetical protein PAU_02223 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781153|emb|CAQ84315.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 193 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 18/158 (11%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILA 58 + K +M A+EEA+ +A P GAV V + +I+SR N +K+ H EI A Sbjct: 42 IAKHEKYMREAIEEAKKSAK---YPFGAVIVNRSSGEILSRGVNS--WVKNPILHGEIQA 96 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFY 117 I + + V LY T EPC+MC +A++ IR + +G S + Sbjct: 97 INHYVTLYGNQGWNNVALYTTAEPCSMCMSALAWTGIREVIWGTSISGLRNVGIRQIDIS 156 Query: 118 TLA------TCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + + GI + ++ F ERR Sbjct: 157 AQEIAERASSFYSPISLVGGILANETDKL----FSERR 190 >gi|302307191|ref|NP_983768.2| ADL328Cp [Ashbya gossypii ATCC 10895] gi|299788881|gb|AAS51592.2| ADL328Cp [Ashbya gossypii ATCC 10895] Length = 151 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 54/144 (37%), Gaps = 14/144 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A +EA +P+G + + ++ R N + T H E A+ R Sbjct: 9 MEIAYQEALQGYAEGGVPIGGCLIDQTDGTVLGRGRNMRFQRASATLHGETAALENAGR- 67 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + LY TL PC MCA A+ L I R G ++ G + Sbjct: 68 LPGHVYKHCTLYTTLSPCDMCAGAVLLYGIPRCVVGENDTFLGAEAHLRA--------RG 119 Query: 126 PEIYPGISEQ-RSRQIIQDFFKER 148 E+ + + R R ++Q F R Sbjct: 120 VEVA--VLQDARCRALMQQFVAAR 141 >gi|258415855|ref|ZP_05682126.1| riboflavin specific deaminase [Staphylococcus aureus A9763] gi|257839448|gb|EEV63921.1| riboflavin specific deaminase [Staphylococcus aureus A9763] Length = 347 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 26/153 (16%) Query: 5 NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 2 SQFMDYAIQLANMVQGQTGVNPPVGAVVVNEGRIVGIGAHLRKGDK----HAEVQALDMA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 Q+ +Y+TLEPC C I +I ++ Y + N Sbjct: 58 -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 105 Query: 117 YTLATCH-HSPEIYPGISEQRSRQIIQDFFKER 148 + H E+ + ++R+ Q+ QDFFK + Sbjct: 106 HGDEALRAHGIEVEC-VDDERASQLYQDFFKAK 137 >gi|251796359|ref|YP_003011090.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. JDR-2] gi|247543985|gb|ACT01004.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. JDR-2] Length = 368 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI-PV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +MS ALE A A+ + I PV G V V + +II + LK T HAE+ A++ Sbjct: 5 NDSYYMSLALELAAKASGQTGINPVVGCVVVKDGRIIGVGTH----LKRGTGHAEVHALQ 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + +YVTLEPC C I A+ R+ ++P G Sbjct: 61 MAG-----DEAEGATVYVTLEPCSHYGKTPPCCERIINAKAARVVVATTDPNPQVAGRGI 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 E+ G+ E++SR + + F Sbjct: 116 ARLREEG----IEVEVGLLEEQSRSMNEKF 141 >gi|302751598|gb|ADL65775.1| bifunctional pyrimidine reductase / riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus str. JKD6008] Length = 343 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 26/150 (17%) Query: 8 MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 1 MDYAIQLANMVQGQTGVNPPVGAVIVKEGRIVGIGAHLRKGDK----HAEVQALDMA--- 53 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 Q+ +Y+TLEPC C I +I ++ Y + N + Sbjct: 54 --QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDTHGD 104 Query: 120 ATCH-HSPEIYPGISEQRSRQIIQDFFKER 148 T H E+ + ++R+ Q+ QDFFK + Sbjct: 105 ETLRAHGIEVEC-VDDERASQLYQDFFKAK 133 >gi|297538271|ref|YP_003674040.1| riboflavin biosynthesis protein RibD [Methylotenera sp. 301] gi|297257618|gb|ADI29463.1| riboflavin biosynthesis protein RibD [Methylotenera sp. 301] Length = 370 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 59/152 (38%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M+ AL A+ + VG V V NN+I+ + + HAE+ A+R Sbjct: 6 DHTYMTLALRLAERGLYTTQPNPRVGCVIVKNNQIVGQGAHLKAGE----PHAEVFALRE 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 D YVTLEPC C A+ AR++R+ +P NG + Sbjct: 62 AGA-----NAEGADAYVTLEPCNHHGRTPPCVDALINARVKRVVVAMQDPNPLVAGNGIK 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 H E+ G+ E S+ + F Sbjct: 117 RLQA----HGIEVEVGLMEAESKSLNLGFISR 144 >gi|330877574|gb|EGH11723.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 378 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ VG V V + +I+ + + HAE+ A+R Sbjct: 9 DVHYMAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGE----PHAEVHALRE 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P +G Sbjct: 65 AGELA-----RGATAYVTLEPCSHQGRTPPCADALISAGLGRVVAAMQDPNPQVAGSGLL 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E +R + + F K Sbjct: 120 RLMTAG----ISVQCGVLESEARALNKGFIKR 147 >gi|113461193|ref|YP_719262.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Haemophilus somnus 129PT] gi|112823236|gb|ABI25325.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Haemophilus somnus 129PT] Length = 376 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM ALE A+ P VG V V N +I+ R + + HAE++A+R Sbjct: 8 QDEYFMQIALELAKKGIFTTTPNPAVGCVLVKNGEIVGRGFH--FKAGQP--HAEVMALR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA + A IR + +P G Sbjct: 64 DAG-----DRAKGATAYVTLEPCSHFGRTPPCAQGLIEAGIRNVIVAMKDPNPQVAGKGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ ++++ + + F R Sbjct: 119 AMLQAAGIESAV----GLLQEKAELLNKGFLTRMR 149 >gi|28897453|ref|NP_797058.1| riboflavin-specific deaminase [Vibrio parahaemolyticus RIMD 2210633] gi|260366283|ref|ZP_05778739.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus K5030] gi|260876413|ref|ZP_05888768.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus AN-5034] gi|260898684|ref|ZP_05907180.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus Peru-466] gi|28805665|dbj|BAC58942.1| riboflavin-specific deaminase [Vibrio parahaemolyticus RIMD 2210633] gi|308086936|gb|EFO36631.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus Peru-466] gi|308092982|gb|EFO42677.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus AN-5034] gi|308112701|gb|EFO50241.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus K5030] Length = 374 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + MS AL+ A+ P VG V V + II + HAE+ A+R Sbjct: 13 QDFSMMSRALKLARRGIYTTAPNPNVGCVIVRDGVIIGEGYHHRAGE----PHAEVYAMR 68 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC CA + A++ R+ +P G Sbjct: 69 MAGDKA-----EGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGI 123 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q A E+ G+ E + ++ + F K Sbjct: 124 QMLREAG----VEVQVGLLENDAIELNRGFIK 151 >gi|104779848|ref|YP_606346.1| riboflavin biosynthesis protein RibD [Pseudomonas entomophila L48] gi|95108835|emb|CAK13531.1| Riboflavin biosynthesis protein RibD [Pseudomonas entomophila L48] Length = 375 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ A+E A+ VG V V + +++ + HAE+ A+R Sbjct: 8 DAHYMARAVELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGE----PHAEVHALRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P NG + Sbjct: 64 AGELA-----RGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGNGLR 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + F K Sbjct: 119 RLREAG----IEVASGVLEAEARALNPGFLKR 146 >gi|226355049|ref|YP_002784789.1| riboflavin biosynthesis protein [Deinococcus deserti VCD115] gi|226317039|gb|ACO45035.1| putative Riboflavin biosynthesis protein ribD [Deinococcus deserti VCD115] Length = 368 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 54/142 (38%), Gaps = 21/142 (14%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL EA R PVG V V + +++ R + HAE+ A+R Sbjct: 8 DTEYMRLALNEAARGMGRTSPNPPVGCVIVRDGQVVGRGFHPRAGE----PHAEVFALRE 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + ++ A +P G Sbjct: 64 AG-----EYARGATAYVTLEPCSHFGRTPPCADALVAAGVSQVVIAALDPNPRVGGQGAS 118 Query: 116 FYTLATCHHSPEIYPGISEQRS 137 A E+ G++E+ + Sbjct: 119 RLREAG----IEVIVGVAEEEA 136 >gi|238918989|ref|YP_002932503.1| riboflavin biosynthesis protein RibD, [Edwardsiella ictaluri 93-146] gi|238868557|gb|ACR68268.1| riboflavin biosynthesis protein RibD, putative [Edwardsiella ictaluri 93-146] Length = 373 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 56/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ A E A+ P VG V V +++I+ + HAE+LA+R Sbjct: 8 SDEFYMARAFELARRGRFTTTPNPNVGCVLVRDDRIVGEGFHLRAGE----PHAEVLALR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M E YVTLEPC CA A+ A + R+ +P G Sbjct: 64 MAG-----EQARGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPHVAGRGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + I + F K R Sbjct: 119 YRLQQAG----IAVQHGLMLAEAEAINKGFLKRMR 149 >gi|260899221|ref|ZP_05907616.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus AQ4037] gi|308106651|gb|EFO44191.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus AQ4037] Length = 374 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + MS AL+ A+ P VG V V + II + HAE+ A+R Sbjct: 13 QDFSMMSRALKLARRGIYTTAPNPNVGCVIVRDGVIIGEGYHHRAGE----PHAEVYAMR 68 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC CA + A++ R+ +P G Sbjct: 69 MAGDKA-----EGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGI 123 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q A E+ G+ E + ++ + F K Sbjct: 124 QMLREAG----VEVQVGLLENDAIELNRGFIK 151 >gi|328472537|gb|EGF43400.1| riboflavin-specific deaminase [Vibrio parahaemolyticus 10329] Length = 374 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + MS AL+ A+ P VG V V + II + HAE+ A+R Sbjct: 13 QDFSMMSRALKLARRGIYTTAPNPNVGCVIVRDGVIIGEGYHHRAGE----PHAEVHAMR 68 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC CA + A++ R+ +P G Sbjct: 69 MAGDKA-----EGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGI 123 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q A E+ G+ E + ++ + F K Sbjct: 124 QMLREAG----VEVQVGLLENDAIELNRGFIK 151 >gi|227537349|ref|ZP_03967398.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase [Sphingobacterium spiritivorum ATCC 33300] gi|227242852|gb|EEI92867.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase [Sphingobacterium spiritivorum ATCC 33300] Length = 350 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 44/162 (27%), Positives = 61/162 (37%), Gaps = 23/162 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M +M LE A A + P VGAV V NKII HAE+ Sbjct: 1 MNMQERYMQRCLELALLGA--GTVSPNPMVGAVIVHENKIIGEGYTSPYGG----PHAEV 54 Query: 57 LAIRMGCRILS---QEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKG 107 AI+ +L E D+YV+LEPC CA I +R++Y +P Sbjct: 55 NAIQQVKDQYPDSADRLLAESDMYVSLEPCAHFGKTPPCANLIVKHNLRKVYIACMDPFA 114 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A E+ G+ E+ + + + FF R Sbjct: 115 QVNGKGLGILQQAG----IEVEVGLLEKEALWLNRRFFTRVR 152 >gi|119472108|ref|ZP_01614339.1| Riboflavin biosynthesis protein [Alteromonadales bacterium TW-7] gi|119445128|gb|EAW26421.1| Riboflavin biosynthesis protein [Alteromonadales bacterium TW-7] Length = 383 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 61/155 (39%), Gaps = 23/155 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + ++M+ A+E A+ P VG V V +N+II ++ HAE+ A Sbjct: 9 EHDKLYMARAIELAKKGRFTT-TPNPNVGCVLVKDNQIIGEGFHQLAGQG----HAEVNA 63 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + YVTLEPC CA + A I+++ + Sbjct: 64 LAVAGEKAQ-----GATAYVTLEPCSHYGRTPPCAEGLKAAGIKKVIAAMVDTNPQVAGK 118 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G + + A E+ G+ EQ +R + FFK Sbjct: 119 GLKILSDAG----IEVAHGLLEQEARALNFGFFKR 149 >gi|332141886|ref|YP_004427624.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii str. 'Deep ecotype'] gi|327551908|gb|AEA98626.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii str. 'Deep ecotype'] Length = 379 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 18/155 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNN-KIISRAGNRNRELKDVTAHAEILA 58 K +M+ A++ A + P VG V V + +++ + + ++ T HAE+ A Sbjct: 7 KNDYYWMAKAIQLANKGRFTTSPNPRVGCVIVDEDSQLLGQGYH----IQAGTPHAEVHA 62 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R E YVTLEPC CA A+ A++ R+ ++P N Sbjct: 63 LRQAAHAR-SEGAKGATAYVTLEPCSHFGRTPPCAKALVEAQVARVVIAMTDPNPNVCGN 121 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G A E+ + + + F K Sbjct: 122 GISMLQEAG----IEVVSEVMAAEAAALNPGFIKR 152 >gi|29830136|ref|NP_824770.1| hypothetical protein SAV_3593 [Streptomyces avermitilis MA-4680] gi|29607246|dbj|BAC71305.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 151 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 13/148 (8%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M L A+ AA +GAV + ++I ++G++ + D T H EI AIR L Sbjct: 1 MEECLCLAREAATTGNYALGAVVIKGGQVIGKSGSKLVQGNDPTGHPEITAIRQAAERLG 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTLATCH-- 123 LP+ L TLEPC MC +A A++R + YGA+ + E+ Q YT Sbjct: 61 SRYLPDAYLVTTLEPCPMCTSAAIWAKMRGIAYGATQIDAVTWSQEHPDQKYTWRQIRMR 120 Query: 124 ---------HSPEIYPGISEQRSRQIIQ 142 S E++ + + ++ Sbjct: 121 ARDVIRAGTPSLELHEEVRREECAKLFT 148 >gi|238897276|ref|YP_002922953.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase (C-terminal) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465031|gb|ACQ66805.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase (C-terminal) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 392 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 55/156 (35%), Gaps = 23/156 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +MS AL A P VG V V + +++ + HAEI A+ Sbjct: 13 QDEFYMSYALRLASLGRFTT-TPNPNVGCVLVRHGQVVGEGYHLRLGE----PHAEIHAL 67 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + R+ Y+TLEPC C A+ A +RR+ +P G Sbjct: 68 QKAGRLA-----KGSVAYITLEPCCHYGKTPPCVEALIKAGVRRVVVAIEDPNPEIAGRG 122 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ GI ++ + F K R Sbjct: 123 LYQLKQAG----IEVTSGILSTEAQDLNPGFLKRMR 154 >gi|188994131|ref|YP_001928383.1| putative riboflavin biosynthesis protein [Porphyromonas gingivalis ATCC 33277] gi|188593811|dbj|BAG32786.1| putative riboflavin biosynthesis protein [Porphyromonas gingivalis ATCC 33277] Length = 330 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 19/157 (12%) Query: 1 MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M ++M A+E AQNA VGAV V + +II + + HAE++A Sbjct: 1 MTPDPLYMRRAIELAQNAEGFTSPNPLVGAVLVAHGRIIGEGYHHCAGM----PHAEVIA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + + +L E LYV+LEPC CA I I + +P Sbjct: 57 INS---VRDRALLRESTLYVSLEPCSHYGKTPPCAELILREGIPHVVVAMLDPFPSVSGR 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + A+ + G+ + + ++ + F +R Sbjct: 114 GIKMLRDAS----VSVQVGLLAEEAEELNRHFLTAQR 146 >gi|323439574|gb|EGA97294.1| riboflavin specific deaminase [Staphylococcus aureus O11] gi|323442021|gb|EGA99657.1| riboflavin specific deaminase [Staphylococcus aureus O46] Length = 343 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 26/150 (17%) Query: 8 MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 1 MDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA--- 53 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 Q+ +Y+TLEPC C I +I ++ Y + N + Sbjct: 54 --QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDTHGD 104 Query: 120 ATC-HHSPEIYPGISEQRSRQIIQDFFKER 148 T H E+ + ++R+ Q+ QDFFK + Sbjct: 105 ETLRDHGIEVEC-VDDERASQLYQDFFKAK 133 >gi|322420507|ref|YP_004199730.1| riboflavin biosynthesis protein RibD [Geobacter sp. M18] gi|320126894|gb|ADW14454.1| riboflavin biosynthesis protein RibD [Geobacter sp. M18] Length = 374 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M AL EA+ + VG V V + +++ + + K T HAE+ A+R Sbjct: 4 DHLKMMRLALSEARKGVGKTAPNPAVGCVIVRDGEVVGKGWH----KKAGTPHAEVHALR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + D YVTLEPC CA A+ AR+ R++ +P G Sbjct: 60 AAGELA-----AGADAYVTLEPCSHFGKTPPCARALIEARVGRVFVAMVDPNPLVSGRGI 114 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ E S +I + F Sbjct: 115 KMLQDAG----IEVEVGLLEAESLEINRPF 140 >gi|298695036|gb|ADI98258.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus ED133] Length = 343 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 26/150 (17%) Query: 8 MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 1 MDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA--- 53 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 Q+ +Y+TLEPC C I +I ++ Y + N + Sbjct: 54 --QQNAEGATIYITLEPCSHFGLTPPCVNKIIDCKIAKVVYATKD-------NSLDTHGD 104 Query: 120 ATC-HHSPEIYPGISEQRSRQIIQDFFKER 148 T H E+ + ++R+ Q+ QDFFK + Sbjct: 105 DTLRDHGIEVEC-VDDERASQLYQDFFKAK 133 >gi|268592074|ref|ZP_06126295.1| riboflavin biosynthesis protein RibD [Providencia rettgeri DSM 1131] gi|291312469|gb|EFE52922.1| riboflavin biosynthesis protein RibD [Providencia rettgeri DSM 1131] Length = 371 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 58/157 (36%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +++ N++M+ A E A+ + P VG V V + I+ ++ HAE+ A Sbjct: 2 IEQDNMYMARAFELARKGRFTTSPNPNVGCVIVRDGTIVGEGYHQKAGE----PHAEVHA 57 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM YVTLEPC CA A+ A + R+ +P Sbjct: 58 LRMAGDKAQ-----GATAYVTLEPCSHHGRTPPCAEALIKAGVSRVVAAMQDPNPQVAGR 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + A E + + + F K R Sbjct: 113 GLYMLSQAG----IETRSNVLLNDAEAANRGFLKRMR 145 >gi|152996717|ref|YP_001341552.1| zinc-binding CMP/dCMP deaminase [Marinomonas sp. MWYL1] gi|150837641|gb|ABR71617.1| CMP/dCMP deaminase zinc-binding [Marinomonas sp. MWYL1] Length = 158 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 56/155 (36%), Gaps = 22/155 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 K F+ + A+ A + P A+ V + + ++ N D+T HAE + Sbjct: 5 TKDTEFLRQSFALAEEAKQQGIHPFAAILVDDEDNVLMTQVNGYLPDFDMTGHAERKLMT 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + L + +YV+ EPC MCA + A + RL YG S + Q Sbjct: 65 RASKAYRPDFLAKCTMYVSAEPCAMCAGSAYWAGLGRLVYGLSED------SLKQITGNH 118 Query: 121 TCHH---------------SPEIYPGISEQRSRQI 140 + E+ E+ + ++ Sbjct: 119 PENPTLALPCRTVFESGQRQVEVIGPCLEEEAAKL 153 >gi|42520555|ref|NP_966470.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410294|gb|AAS14404.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of Drosophila melanogaster] Length = 360 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 25/153 (16%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + FMS AL A+ + P VG + V + I+S HAE++A Sbjct: 2 TDDHFMSIALRLAEKNL--GNVAPNPAVGCIIVKDGTIVSEGY----TGIGGRPHAEVVA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 ++ +Y+TLEPC C A I A I+R+ +P Sbjct: 56 LQNAKDSTH-----GATIYITLEPCCHHGVTGPCTAKIIKASIKRVVIATIDPDSRVSGR 110 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A E+ GI ++ ++++ FF Sbjct: 111 GMKALKEAG----IEVEQGIMQKEAKELNVGFF 139 >gi|154759286|ref|NP_001094076.1| tRNA-specific adenosine deaminase-like protein 3 [Mus musculus] gi|81892416|sp|Q6PAT0|ADAT3_MOUSE RecName: Full=tRNA-specific adenosine deaminase-like protein 3; AltName: Full=tRNA-specific adenosine-34 deaminase subunit ADAT3 gi|148699580|gb|EDL31527.1| secretory carrier membrane protein 4, isoform CRA_d [Mus musculus] Length = 349 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 40/153 (26%) Query: 26 VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRM----------------GC---- 63 VGAV V +++++ + HA ++ I + C Sbjct: 195 VGAVVVDPASDRVLATGH-DCSSVASPLLHAVMVCIDLVAQGQGRGSCDLRSHPACSFTQ 253 Query: 64 ------------RILSQEILP----EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 R L ++ LP DLYVT EPC MCA A+ ARI+R++YGA +P Sbjct: 254 ATATQGARAGSVRKLDEDSLPYVCTGYDLYVTREPCVMCAMALVHARIQRVFYGAPSPD- 312 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 G + + + +H +++ GI E + RQ+ Sbjct: 313 GALGTLFRVHARPDLNHRFQVFRGILEDQCRQL 345 >gi|332295838|ref|YP_004437761.1| riboflavin biosynthesis protein RibD [Thermodesulfobium narugense DSM 14796] gi|332178941|gb|AEE14630.1| riboflavin biosynthesis protein RibD [Thermodesulfobium narugense DSM 14796] Length = 372 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 44/155 (28%), Positives = 61/155 (39%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M FM AL+ A N VG + V + KIIS+ +R HAE A Sbjct: 10 MVLHESFMKKALDLALNGKYYTSPNPMVGCIVVKDKKIISQGYHRAYGE----PHAEANA 65 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + DLYVTLEPC C + I + I+R++ +P Sbjct: 66 L-----KPKYIDFSGADLYVTLEPCLHYGKTPSCTSKIISSGIKRVFIATLDPNPKMNGK 120 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + A E+Y GI E+ +R I + FFK Sbjct: 121 SVEILKYAG----IEVYTGILEKEARFINRHFFKA 151 >gi|153845346|ref|ZP_01993762.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus AQ3810] gi|149745121|gb|EDM56372.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus AQ3810] Length = 280 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + MS AL+ A+ P VG V V + I+ + HAE+ A+R Sbjct: 13 QDFSMMSRALKLARRGIYTTAPNPNVGCVIVRDGVIVGEGYHHRAGE----PHAEVHAMR 68 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC CA + A++ R+ +P G Sbjct: 69 MAGDKA-----EGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGI 123 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q A E+ G+ E + ++ + F K Sbjct: 124 QMLREAG----VEVQVGLLENDAIELNRGFIK 151 >gi|222055764|ref|YP_002538126.1| riboflavin biosynthesis protein RibD [Geobacter sp. FRC-32] gi|221565053|gb|ACM21025.1| riboflavin biosynthesis protein RibD [Geobacter sp. FRC-32] Length = 368 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 21/150 (14%) Query: 5 NVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 M A+ A+ + VG V V + I+ +R K T HAEI A+R Sbjct: 6 ENMMKRAVSLARKGVGKTAPNPAVGCVIVKDGAIVGEGWHR----KAGTPHAEIHALRQA 61 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + D++VTLEPC CA A+ A++ R+Y G +P G Sbjct: 62 GALA-----EGADVFVTLEPCSHFGKTPPCADALIAAKVARVYVGMVDPNPRVCGKGISK 116 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A ++ + E++ R + + F K Sbjct: 117 LRAAG----IQVEAPLLEEKCRALNEPFIK 142 >gi|260886861|ref|ZP_05898124.1| riboflavin biosynthesis protein RibD [Selenomonas sputigena ATCC 35185] gi|330839340|ref|YP_004413920.1| riboflavin biosynthesis protein RibD [Selenomonas sputigena ATCC 35185] gi|260863460|gb|EEX77960.1| riboflavin biosynthesis protein RibD [Selenomonas sputigena ATCC 35185] gi|329747104|gb|AEC00461.1| riboflavin biosynthesis protein RibD [Selenomonas sputigena ATCC 35185] Length = 367 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 23/155 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M++ FM AL A NA R P VGAV V +I+ +R K T HAE+ Sbjct: 1 MQQDEDFMREALLLAANARGRT-APNPLVGAVIVREGRIVGAGWHR----KAGTPHAEVH 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 A+ M + +YVTLEPC+ CA A+ A ++R+ +P Sbjct: 56 ALAMAGDLAH-----GATVYVTLEPCSHHGRTGPCAEALVKAGVKRVVTAMLDPNPLVAG 110 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G A E+ G+ + +R++ + + K Sbjct: 111 KGKAMLEAAG----VEVTVGVLAEEARRLNEAYLK 141 >gi|323357173|ref|YP_004223569.1| cytosine/adenosine deaminase [Microbacterium testaceum StLB037] gi|323273544|dbj|BAJ73689.1| cytosine/adenosine deaminase [Microbacterium testaceum StLB037] Length = 159 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 57/152 (37%), Gaps = 9/152 (5%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + A+ +Q A P GA+ V + + A N +DVT HAE +R Sbjct: 8 TDLAHLHRAIALSQLAREHGNHPFGALLVTADGRVVEAENTVLTERDVTGHAETNLVRRV 67 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI------ENGTQF 116 + L LP LY + EPC MC AI A I R+ Y S + Sbjct: 68 WKDLDAAELPASTLYTSCEPCAMCCGAIFWAGIGRVVYALSGTGLIALAGPEDDGTALDL 127 Query: 117 YTLATCHH---SPEIYPGISEQRSRQIIQDFF 145 + H + E+ E+ + Q + F+ Sbjct: 128 PSREVFAHGTRAIEVSGPHLEEAAAQPHRGFW 159 >gi|313496881|gb|ADR58247.1| RibD [Pseudomonas putida BIRD-1] Length = 376 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ VG V V + +++ + HAE+ A+R Sbjct: 9 DAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGE----PHAEVHALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P G + Sbjct: 65 AGELA-----RGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLR 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + F K Sbjct: 120 RLAEAG----IEVASGVLEAEARALNPGFLKR 147 >gi|237797512|ref|ZP_04585973.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020362|gb|EGI00419.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. oryzae str. 1_6] Length = 381 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ VG V V + +I+ + HAE+ A+R Sbjct: 12 DVHYMAHALELARKGLYSTHPNPRVGCVIVRDGQIVGEGWHARAGE----PHAEVHALRQ 67 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P G Sbjct: 68 AGELA-----RGATAYVTLEPCSHQGRTPPCADALVEAGLSRVVAAMQDPNPEVSGRGL- 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + + G+ E +R + + F K Sbjct: 122 ---LRLMNAGIGVQCGVLENEARALNKGFLKR 150 >gi|323436092|ref|ZP_08088234.1| riboflavin biosynthesis protein RibD [Dokdonia donghaensis MED134] gi|321496407|gb|EAQ38739.2| riboflavin biosynthesis protein RibD [Dokdonia donghaensis MED134] Length = 346 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 19/153 (12%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 K N ++ + A+N +P VGAV V NN II+ HAE+ Sbjct: 15 KIHNTYIKRCIALAKNGLPAA-MPNPSVGAVLVHNNTIIAEGY--TSAYGGP--HAEVNC 69 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + + E++ + LYV+LEPC CA + + I+R+ G +P Sbjct: 70 I-AFAKANTPELIAKSTLYVSLEPCSHWGKTPPCADLVIDSGIKRVVIGTIDPFAKVAGA 128 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A ++ G+ E+ +++ + FF Sbjct: 129 GIKKLMQAG----VDVTVGVLEKECQEVNKRFF 157 >gi|304395476|ref|ZP_07377359.1| riboflavin biosynthesis protein RibD [Pantoea sp. aB] gi|304356770|gb|EFM21134.1| riboflavin biosynthesis protein RibD [Pantoea sp. aB] Length = 366 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 55/155 (35%), Gaps = 23/155 (14%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++M+ ALE A+ +P VG V V + ++ ++ HAE+ A+R Sbjct: 2 DELYMARALELARRGRFTT-MPNPNVGCVIVRDGEVAGEGWHQRAGE----PHAEVHALR 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 57 MAGEKA-----RGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGL 111 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + G+ + + + F K R Sbjct: 112 HRLHQSG----IAVSHGLMMPEAEALNRGFLKRMR 142 >gi|304315557|ref|YP_003850702.1| riboflavin biosynthesis protein RibD [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777059|gb|ADL67618.1| riboflavin biosynthesis protein RibD [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 356 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 21/147 (14%) Query: 8 MSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL+ A+ P VGAV V N +II + HAEI A+ Sbjct: 1 MKRALQLAKLGLGHTNPNPLVGAVIVKNGRIIGEGYHEYYGG----PHAEINAL-----K 51 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +E + LYVTLEPC C AI + I+ ++ +P G + Sbjct: 52 SVKEDVIGAQLYVTLEPCCHYGKTPPCVDAIVKSGIKDVFIAMEDPNKLVSGKGIKHLKE 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146 A + +Y G+ ++ + +I + F K Sbjct: 112 AGLN----VYTGLLKEEAEKINEIFIK 134 >gi|126175361|ref|YP_001051510.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS155] gi|125998566|gb|ABN62641.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Shewanella baltica OS155] Length = 384 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 MS A++ A+ R VG V V +N+I+ ++ HAE+ A+RM Sbjct: 11 DTQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGE----PHAEVHALRM 66 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ ++R+ +P G Q Sbjct: 67 AG-----EHARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVAGRGIQ 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ + + F K Sbjct: 122 MLRDAG----IEVDVGLHRDEAYALNLGFMKR 149 >gi|228992853|ref|ZP_04152778.1| RibD (Riboflavin-specific deaminase) [Bacillus pseudomycoides DSM 12442] gi|228766902|gb|EEM15540.1| RibD (Riboflavin-specific deaminase) [Bacillus pseudomycoides DSM 12442] Length = 373 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 23/155 (14%) Query: 1 MKK--GNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 MK+ +M AL+ AQ A + P VGAV V + I+ + + HAE+ Sbjct: 1 MKRMTDQEYMRIALQLAQSTAGQTSPNPMVGAVVVKDGNIVGMGAHLLAGEE----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+RM +YVTLEPC C + +++R+ + Sbjct: 57 HALRMAGDKA-----NGSTVYVTLEPCSHFGKTPPCCDLLIEKKVKRVVIATLDCNPLVS 111 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 +G + A + G+ E+ + + + FF Sbjct: 112 GSGAKRLQKAG----ISVTTGVLEEEATALNRYFF 142 >gi|206578559|ref|YP_002240118.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae 342] gi|206567617|gb|ACI09393.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae 342] Length = 367 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++M+ AL+ A + P VG V V + +I+ + HAE+ A+R Sbjct: 2 QDEMYMARALKLATRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKAQ-----GATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + + + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMNEAEALNKGFLKRMR 143 >gi|323141090|ref|ZP_08075995.1| riboflavin biosynthesis protein RibD [Phascolarctobacterium sp. YIT 12067] gi|322414466|gb|EFY05280.1| riboflavin biosynthesis protein RibD [Phascolarctobacterium sp. YIT 12067] Length = 388 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 26/154 (16%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEIL 57 +M ALE A A P VG V V I+ + HAE+ Sbjct: 16 TDEAYMQRALELALQA--EGNTSPNPMVGCVIVDAEGNIVGEGYHHKAGE----PHAEVN 69 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 A+ ++ YVTLEPC C A++ A I ++ +P Sbjct: 70 ALAEAKQMAQ-----GATAYVTLEPCAHYGRTGPCCVALARAGIGKVVVACLDPNPKVAG 124 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G ++ L E+ G+ E+ ++++ + FF Sbjct: 125 QGLEYLRLQG----IEVVTGVCEKEAKRLNERFF 154 >gi|304410191|ref|ZP_07391810.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS183] gi|307302098|ref|ZP_07581856.1| riboflavin biosynthesis protein RibD [Shewanella baltica BA175] gi|304351600|gb|EFM15999.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS183] gi|306914136|gb|EFN44557.1| riboflavin biosynthesis protein RibD [Shewanella baltica BA175] Length = 384 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 MS A++ A+ R VG V V +N+I+ ++ HAE+ A+RM Sbjct: 11 DTQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGE----PHAEVHALRM 66 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ ++R+ +P G Q Sbjct: 67 AG-----EHARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVAGRGIQ 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ + + F K Sbjct: 122 MLRDAG----IEVDVGLHRDEAYALNLGFMKR 149 >gi|320546418|ref|ZP_08040733.1| riboflavin biosynthesis protein RibD [Streptococcus equinus ATCC 9812] gi|320448803|gb|EFW89531.1| riboflavin biosynthesis protein RibD [Streptococcus equinus ATCC 9812] Length = 351 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 22/157 (14%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A+EEA+ + VGAV V +N +I+R + + HAE AI Sbjct: 2 DKNYMLQAIEEAKRGFRQTYTNPLVGAVIVKDNHVIARGAHLQYGHE----HAEKNAI-- 55 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + E L LYVTLEPC C AI I+++ G +P G Sbjct: 56 -LHCQTPEELFNSTLYVTLEPCHHGGKQPPCTQAIVEVGIKKVVAGQFDPNPLVAGKGVA 114 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQD---FFKERR 149 F E+ + E+ +R + + +++ +R Sbjct: 115 FLKEQG----IEVVTHVLEEEARALNKHYNVYYERKR 147 >gi|170717790|ref|YP_001784854.1| riboflavin biosynthesis protein RibD [Haemophilus somnus 2336] gi|168825919|gb|ACA31290.1| riboflavin biosynthesis protein RibD [Haemophilus somnus 2336] Length = 376 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM AL+ A+ P VG V V N +I+ R + + HAE++A+R Sbjct: 8 QDEYFMQIALDLAKKGIFTTTPNPAVGCVLVKNGEIVGRGFH--FKAGQP--HAEVMALR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA + A IR + +P G Sbjct: 64 DAG-----DRAKGATAYVTLEPCSHFGRTPPCAQGLIEAGIRNVIVAMKDPNPQVAGKGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ ++++ + + F R Sbjct: 119 AMLQAAGIESAV----GLLQEKAELLNKGFLTRMR 149 >gi|288936867|ref|YP_003440926.1| riboflavin biosynthesis protein RibD [Klebsiella variicola At-22] gi|290510077|ref|ZP_06549447.1| riboflavin biosynthesis protein RibD [Klebsiella sp. 1_1_55] gi|288891576|gb|ADC59894.1| riboflavin biosynthesis protein RibD [Klebsiella variicola At-22] gi|289776793|gb|EFD84791.1| riboflavin biosynthesis protein RibD [Klebsiella sp. 1_1_55] Length = 367 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++M+ AL+ A + P VG V V + +I+ + HAE+ A+R Sbjct: 2 QDEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKAQ-----GATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + + + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMNEAEALNKGFLKRMR 143 >gi|320139809|gb|EFW31673.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus MRSA131] Length = 343 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 26/150 (17%) Query: 8 MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 1 MDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA--- 53 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 Q+ +Y+TLEPC C I +I ++ Y + N + Sbjct: 54 --QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDTHGD 104 Query: 120 ATCH-HSPEIYPGISEQRSRQIIQDFFKER 148 T H E+ + ++R+ Q+ QDFFK + Sbjct: 105 ETLRAHGIEVEC-VDDERASQLYQDFFKAK 133 >gi|111657939|ref|ZP_01408648.1| hypothetical protein SpneT_02000888 [Streptococcus pneumoniae TIGR4] Length = 360 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 57/145 (39%), Gaps = 21/145 (14%) Query: 8 MSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A++ AQ A N P VGAV V +N II + + HAE A++ CR Sbjct: 1 MKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----PHAERNALKN-CRE 55 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 LYVTLEPC C AI + I R+ G+ + G + Sbjct: 56 SP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGVKILEE 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 ++ GI E +I+ F Sbjct: 112 NNL----QVTVGILENECLNLIKSF 132 >gi|26987252|ref|NP_742677.1| riboflavin biosynthesis protein RibD [Pseudomonas putida KT2440] gi|24981894|gb|AAN66141.1|AE016242_9 riboflavin biosynthesis protein RibD [Pseudomonas putida KT2440] Length = 378 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ VG V V + +++ + HAE+ A+R Sbjct: 11 DAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGE----PHAEVHALRQ 66 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P G + Sbjct: 67 AGELA-----RGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLR 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + F K Sbjct: 122 RLAEAG----IEVASGVLEAEARALNPGFLKR 149 >gi|148545799|ref|YP_001265901.1| riboflavin biosynthesis protein RibD [Pseudomonas putida F1] gi|148509857|gb|ABQ76717.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pseudomonas putida F1] Length = 376 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ VG V V + +++ + HAE+ A+R Sbjct: 9 DAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGE----PHAEVHALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P G + Sbjct: 65 AGELA-----RGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLR 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + F K Sbjct: 120 RLAEAG----IEVASGVLEAEARALNPGFLKR 147 >gi|331001110|ref|ZP_08324741.1| riboflavin biosynthesis protein RibD [Parasutterella excrementihominis YIT 11859] gi|329569415|gb|EGG51193.1| riboflavin biosynthesis protein RibD [Parasutterella excrementihominis YIT 11859] Length = 355 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 18/150 (12%) Query: 8 MSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M ALE A+ A VG V V + +II + AHAE++A+R Sbjct: 1 MRRALELAKKARFNCPPNPAVGCVIVKDRRIIGEGFTQKTGE----AHAEVMALRDAASR 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E + +YVTLEPC CA A+ A++ R+ +P G + Sbjct: 57 --GESVAGATVYVTLEPCSHYGRTPPCALALKNAKVARVVAALKDPNPLVAGKGLKMLEE 114 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + + +I + F K +R Sbjct: 115 AG----VKVECGLEAEEAEEINRGFLKRQR 140 >gi|242278131|ref|YP_002990260.1| riboflavin biosynthesis protein RibD [Desulfovibrio salexigens DSM 2638] gi|242121025|gb|ACS78721.1| riboflavin biosynthesis protein RibD [Desulfovibrio salexigens DSM 2638] Length = 377 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 60/158 (37%), Gaps = 25/158 (15%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM+ A+E A R P VGAV V + +I++ + HAE I Sbjct: 8 DERFMARAVELAIRGRNRT-APNPTVGAVMVRDGQIVAEGYHMFCGGL----HAERECI- 61 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + + +YVTLEPC C I A I + G +P G Sbjct: 62 -ADAKAKGVDMSKCTMYVTLEPCNHHGKTPPCTEGILEASIPHIVVGTRDPNPKAAG-GI 119 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF----FKER 148 ++ + G+ E++ + +I DF FK+R Sbjct: 120 EYLESKG----VRVDQGVLEEQCKDLISDFLCWQFKDR 153 >gi|170117507|ref|XP_001889940.1| predicted protein [Laccaria bicolor S238N-H82] gi|164635076|gb|EDQ99389.1| predicted protein [Laccaria bicolor S238N-H82] Length = 153 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 23/149 (15%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK--------IISRAGNRNRELKDVTAHAEILAI 59 M A+ EAQ + IP+G+V +L N+ ++ N + T I A+ Sbjct: 6 MILAISEAQMGHKQGGIPIGSVLLLPNESDAEGTFTLLGSGHNERIQKSSPTL---ISAL 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R LS E+ + +Y TL PC+MC+ AI L +I R+ G + G E Sbjct: 63 ENAGR-LSPEVYRKSTIYTTLSPCSMCSGAILLYKIPRVVIGENETFLGEEE----LLRS 117 Query: 120 ATCHHSPEIYPGISE-QRSRQIIQDFFKE 147 E+ + + + + I++ F +E Sbjct: 118 RG----VEVV--VLDNEECKDIMRRFIQE 140 >gi|299143100|ref|ZP_07036209.1| riboflavin biosynthesis protein RibD [Prevotella oris C735] gi|298575428|gb|EFI47325.1| riboflavin biosynthesis protein RibD [Prevotella oris C735] Length = 318 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 17/150 (11%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M L+ A+N VGAV V +++II + HAE+ A Sbjct: 2 EHEYYMKRCLQLAENGRQNAKLNPMVGAVIVAHDRIIGEGYHVRCGEG----HAEVNAF- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 R +++LPE +YV+LEPC CA I I+R G +P G Sbjct: 57 ASVRPEDEKLLPEATIYVSLEPCSHYGKTPPCADLIISKGIKRCVCGCVDPFAKVQGRGI 116 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 Q A E+ G+ E + + F Sbjct: 117 QRMRDAG----IEVVVGVMEAECLALNRRF 142 >gi|217972396|ref|YP_002357147.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS223] gi|217497531|gb|ACK45724.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS223] Length = 384 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 MS A++ A+ R VG V V +N+I+ ++ HAE+ A+RM Sbjct: 11 DTQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGE----PHAEVHALRM 66 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ ++R+ +P G Q Sbjct: 67 AG-----EHARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVAGRGIQ 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ + + F K Sbjct: 122 MLRDAG----IEVDVGLHRDEAYALNLGFMKR 149 >gi|241888469|ref|ZP_04775779.1| riboflavin biosynthesis protein RibD [Gemella haemolysans ATCC 10379] gi|241864861|gb|EER69233.1| riboflavin biosynthesis protein RibD [Gemella haemolysans ATCC 10379] Length = 356 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 36/145 (24%), Positives = 54/145 (37%), Gaps = 19/145 (13%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL EA+ VGA+ V +++II+R + HAE AI Sbjct: 2 HEYFMKLALLEAKRGTKYTHTNPIVGAIIVKDDEIIARGSHLRY----GCEHAEKNAI-- 55 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + E L LYVTLEPC C I I ++ +P G + Sbjct: 56 -STCETPEKLFNSTLYVTLEPCNHKGKQPPCTDTIVEMGISKVVVAQLDPNPLVSGKGIK 114 Query: 116 FYTLATCHHSPEIYPGISEQRSRQI 140 + E+ G+ E+ + + Sbjct: 115 YLQDNG----IEVITGVLEKEAYNL 135 >gi|284031454|ref|YP_003381385.1| CMP/dCMP deaminase zinc-binding protein [Kribbella flavida DSM 17836] gi|283810747|gb|ADB32586.1| CMP/dCMP deaminase zinc-binding protein [Kribbella flavida DSM 17836] Length = 143 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 F+ A+E A A P G++ + +++ N + D+TAH E+ R Sbjct: 6 DEGFLRRAIELAATADKSGNPPFGSLLAGPDGTVLAEDHNTSVTDNDITAHPELKLARWA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L+ ++ +Y + +PC MC+ A+ + + R+ Y S + ++ G F + Sbjct: 66 AANLTPDVAAGTTMYTSCQPCRMCSGALERSGLGRVVYALSGDQLNALKPGGGFAPVP 123 >gi|34540017|ref|NP_904496.1| riboflavin biosynthesis protein RibD [Porphyromonas gingivalis W83] gi|34396328|gb|AAQ65395.1| riboflavin biosynthesis protein RibD [Porphyromonas gingivalis W83] Length = 330 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 19/157 (12%) Query: 1 MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M ++M A+E AQNA VGAV V + +II + + HAE++A Sbjct: 1 MTPDPLYMRRAIELAQNAEGFTSPNPLVGAVLVAHGRIIGEGYHHCAGM----PHAEVIA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + + +L E LYV+LEPC CA I I + +P Sbjct: 57 INS---VRDRALLRESTLYVSLEPCSHYGKTPPCAELILREGIPHVVVAMLDPFPSVSGR 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + A + G+ + + ++ + F +R Sbjct: 114 GIKMLRDAG----VSVQVGLLAEEAEELNRHFLTAQR 146 >gi|305667257|ref|YP_003863544.1| putative riboflavin biosynthesis protein [Maribacter sp. HTCC2170] gi|88709304|gb|EAR01537.1| putative riboflavin biosynthesis protein [Maribacter sp. HTCC2170] Length = 350 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 44/158 (27%), Positives = 63/158 (39%), Gaps = 21/158 (13%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +++M AL A+N VGAV V N KII+ AHAE+ A Sbjct: 1 MSLDHLYMQRALLLAKNGLGTTAPNPMVGAVLVCNEKIIAEGYTSPYGG----AHAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + + IL LYVTLEPC CA I I R+ G + Sbjct: 57 INS---VEDKSILANSTLYVTLEPCSHHGKTPPCADLIIKHNIPRVVIGTLDSHEKVAGK 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF--FKER 148 G + + C ++ G+ E ++ + F F +R Sbjct: 114 GKRMLEESGC----KVTLGVLENACKEHHKRFLTFHQR 147 >gi|320529850|ref|ZP_08030927.1| riboflavin biosynthesis protein RibD [Selenomonas artemidis F0399] gi|320137868|gb|EFW29773.1| riboflavin biosynthesis protein RibD [Selenomonas artemidis F0399] Length = 369 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM AL A+ A R P VGAV V + ++ +R HAEI A+R Sbjct: 7 RDEHFMWEALHLAEFARGRTSPNPLVGAVIVRDGIVVGSGWHRVAGE----PHAEIHALR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 M + LYVTLEPC+ CA A+ A I R+ S+P +G Sbjct: 63 MAGELA-----RGATLYVTLEPCSHHGRTGPCAEAVIAAGIARVVTALSDPNPVVAGHGI 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + A E+ G+ + +R+ + F K Sbjct: 118 ERLRAAG----IEVTTGVLSEEARRQNEVFLK 145 >gi|308272935|emb|CBX29539.1| Riboflavin biosynthesis protein ribD [uncultured Desulfobacterium sp.] Length = 380 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 59/152 (38%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A++ A+ VGAV V + K+ + + AHAE+ AI Sbjct: 16 DDLFYMKMAIDLAEKGRGFTSPNPMVGAVVVKDGKVAGKGYHEAYGK----AHAEVNAID 71 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + LYVTLEPC C I + I+R+ +P NG+ Sbjct: 72 DAKKDSF-----GATLYVTLEPCNHFGKTPPCTKKIIESGIKRVVAAIRDPNPDVKGNGS 126 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 ++ ++ ++ G+ + + + + F K Sbjct: 127 EYLK----NNGIDVIFGVCGKEAEKQNEIFIK 154 >gi|303327265|ref|ZP_07357707.1| riboflavin biosynthesis protein RibD [Desulfovibrio sp. 3_1_syn3] gi|302863253|gb|EFL86185.1| riboflavin biosynthesis protein RibD [Desulfovibrio sp. 3_1_syn3] Length = 385 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 58/154 (37%), Gaps = 21/154 (13%) Query: 1 MKKGNV--FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M + + FM A+ A+ P VGAV + + ++++R + +D HAE+ Sbjct: 1 MTEQDFAPFMREAIALAEQGRWKACPNPTVGAVLLRDGRVVARGWHH-EAGQD---HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 ++ L VTLEPC C AI A I R+ G ++P Sbjct: 57 DCLKDAATRGVDP--KGCTLVVTLEPCNHQGKTPPCTQAILDAGISRVVMGLADPNPQAA 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + E+ + E R ++ DF Sbjct: 115 GGAARLRDT-----GMEVLGPVCEAECRDLVADF 143 >gi|156843603|ref|XP_001644868.1| hypothetical protein Kpol_1065p25 [Vanderwaltozyma polyspora DSM 70294] gi|156115520|gb|EDO17010.1| hypothetical protein Kpol_1065p25 [Vanderwaltozyma polyspora DSM 70294] Length = 154 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 13/150 (8%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59 K + M A EEA +P+G + + KI+ R N + T H EI + Sbjct: 5 KWDKLGMDVAYEEASKGYEEGGVPIGGCLINNEDGKILGRGHNMRFQKGSATLHGEISTL 64 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYT 118 R+ ++ LY TL PC MC AI + I R+ G + N K G E Sbjct: 65 ENCGRLEG-KVYKNTTLYTTLSPCDMCTGAILMYGIPRVVVGENVNFKSPGEEYLKS--- 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148 E+ + ++R + I+ F + R Sbjct: 121 -----RGAEVLV-VDDERCKSIMNLFIETR 144 >gi|154333185|ref|XP_001562853.1| deaminase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134059858|emb|CAM37286.1| putative deaminase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 276 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 75/256 (29%), Gaps = 113/256 (44%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVL-------------------------------N 33 + FM AL EA+ A E+PVG V V + Sbjct: 7 DAFMRAALSEAEMALEEGEVPVGCVLVRTDANEAAYMKFALQSPDAITGASPHTASSLSD 66 Query: 34 NKII-----SRAGNRNRELKDVTAHAEILA---IRMGCRILSQ----------------- 68 ++++ +R N+ AHAE +A +R Sbjct: 67 DQLVESCIAARGRNQTNLQHHALAHAEFIAAEQLRDAATRGGDASAGASASEAGAAGGTK 126 Query: 69 --------------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 L E LYVT+EPC MC+A + RI +++G NP+ G Sbjct: 127 DLVELAKENQLTSSSTVTPLSDLAEYVLYVTVEPCVMCSAMLLYNRIEHVFFGCRNPRFG 186 Query: 109 GIENGTQFYTLATCH----------HSPEIY---------------------------PG 131 G +T H H P + G Sbjct: 187 GNGTVLALHTPLCLHEPSEPAQPAAHGPRLVDTSKRSPSAHENGSECSGAWWPGYVSEGG 246 Query: 132 ISEQRSRQIIQDFFKE 147 +E + ++Q F++ Sbjct: 247 HTEAEAISLLQRFYER 262 >gi|120602900|ref|YP_967300.1| riboflavin biosynthesis protein RibD [Desulfovibrio vulgaris DP4] gi|120563129|gb|ABM28873.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Desulfovibrio vulgaris DP4] Length = 377 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 56/146 (38%), Gaps = 19/146 (13%) Query: 7 FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+ A+ VGAV V + ++++R + HAE+ +R Sbjct: 8 FMREAIALAERGRWYAAPNPTVGAVLVRDGEVVARGWHTGYGK----PHAEVECLRDAAS 63 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 L VTLEPC C+ AI A I R+ G ++P G ++ Sbjct: 64 KGVDP--AHCTLVVTLEPCNHHGKTPPCSHAIVKAGITRVVVGLADPNPVASG-GAEYLR 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144 H + G+ EQ ++ DF Sbjct: 121 A----HGVTVDMGVCEQECHDLVADF 142 >gi|229047052|ref|ZP_04192675.1| Riboflavin biosynthesis protein [Bacillus cereus AH676] gi|228724291|gb|EEL75625.1| Riboflavin biosynthesis protein [Bacillus cereus AH676] Length = 358 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 43/146 (29%), Positives = 63/146 (43%), Gaps = 23/146 (15%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M ALE A A P VG+V V +N+I+ + HAEI AIRM Sbjct: 1 MKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMAG- 54 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 E + +YVTLEPC+ CA AI A I+++ +P G + Sbjct: 55 ----EQVRGATIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQ 110 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ S+++ + F Sbjct: 111 DAG----IEVLVGVCEEESKKMNEVF 132 >gi|253990958|ref|YP_003042314.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782408|emb|CAQ85572.1| Riboflavin biosynthesis protein [Photorhabdus asymbiotica] Length = 362 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 55/150 (36%), Gaps = 21/150 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ ALE A+ + P VG V V + +I+ + HAE+ A+RM Sbjct: 1 MARALELARQGCFTTSPNPNVGCVIVRDGQIVGEGFHLRSGG----PHAEVHALRMAGDK 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC CA A+ A + R+ +P G Sbjct: 57 A-----KGSTAYVTLEPCSHHGKTPPCADALIAAGVSRVVTAMQDPNPQVAGRGLYKLQQ 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ + + + F K R Sbjct: 112 AG----IEVEHGLMMAEAESLNRGFLKRMR 137 >gi|209364139|ref|YP_001424993.2| guanine deaminase [Coxiella burnetii Dugway 5J108-111] gi|207082072|gb|ABS77888.2| guanine deaminase [Coxiella burnetii Dugway 5J108-111] Length = 298 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 36/135 (26%), Positives = 50/135 (37%), Gaps = 22/135 (16%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV----LNNKIISR--AGNRNRELKDVTAHAEI 56 G+ + A EEA +A P GAV V + ++ N + + D TAHAE+ Sbjct: 122 SGDKWAKLANEEALKSAKLGSPPFGAVIVQIDDKSGRVFRYWVDHNHSVDWHDPTAHAEM 181 Query: 57 LAIRMGCRILSQEIL----------------PEVDLYVTLEPCTMCAAAISLARIRRLYY 100 IR R L+ L +Y + EPC MC AAI A I L + Sbjct: 182 SVIRKAARELNVTDLGHIRKEDSKLSQPSEWSHCVIYSSAEPCPMCMAAIYWAGIHYLVF 241 Query: 101 GASNPKGGGIENGTQ 115 A+ Sbjct: 242 SATRYDTAAPGVNWD 256 >gi|330964923|gb|EGH65183.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. actinidiae str. M302091] Length = 378 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ VG V V + +I+ + + HAE+ A+R Sbjct: 9 DVHYMAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGE----PHAEVHALRE 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P +G Sbjct: 65 AGELA-----RGATAYVTLEPCSHQGRTPPCADALISAGLGRVVAAMQDPNPQVAGSGLL 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E +R + + F K Sbjct: 120 RLMTAG----ISVQCGVLEGEARALNKGFIKR 147 >gi|228973365|ref|ZP_04133953.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228786345|gb|EEM34336.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar thuringiensis str. T01001] Length = 358 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 23/146 (15%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M ALE A A P VG+V V +N+I+ + HAEI AIRM Sbjct: 1 MKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMAG- 54 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 E +YVTLEPC+ CA AI A I+++ +P G + Sbjct: 55 ----EQARGATIYVTLEPCSHYGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQ 110 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ S+++ + F Sbjct: 111 DAG----IEVLVGVCEEESKKMNEVF 132 >gi|254372095|ref|ZP_04987588.1| hypothetical protein FTCG_01236 [Francisella tularensis subsp. novicida GA99-3549] gi|151569826|gb|EDN35480.1| hypothetical protein FTCG_01236 [Francisella novicida GA99-3549] Length = 355 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 22/154 (14%) Query: 1 MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MK +M AL A L VG + V N IIS + AHAE+ Sbjct: 1 MKNIDKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGE----AHAEVH 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ YVTLEPC C I A I+++ +P Sbjct: 57 ALIKVGDKA-----KGATAYVTLEPCCHHGRTPPCTDTIIKAGIKKVIIATLDPNPKVAG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + + + G+ E++++++ + FF Sbjct: 112 KGVERLK----NAGITVEVGLLEKQAQELNKIFF 141 >gi|118496729|ref|YP_897779.1| pyrimidine reductase/pyrimidine deaminase [Francisella tularensis subsp. novicida U112] gi|194324036|ref|ZP_03057811.1| riboflavin biosynthesis protein RibD [Francisella tularensis subsp. novicida FTE] gi|208780000|ref|ZP_03247343.1| riboflavin biosynthesis protein RibD [Francisella novicida FTG] gi|118422635|gb|ABK89025.1| pyrimidine reductase/pyrimidine deaminase [Francisella novicida U112] gi|194321933|gb|EDX19416.1| riboflavin biosynthesis protein RibD [Francisella tularensis subsp. novicida FTE] gi|208744004|gb|EDZ90305.1| riboflavin biosynthesis protein RibD [Francisella novicida FTG] Length = 355 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 22/154 (14%) Query: 1 MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MK +M AL A L VG + V N IIS + AHAE+ Sbjct: 1 MKNIDKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGE----AHAEVH 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ YVTLEPC C I A I+++ +P Sbjct: 57 ALIKVGDKA-----KGATAYVTLEPCCHHGRTPPCTDTIIKAGIKKVIIATLDPNPKVAG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + + + G+ E++++++ + FF Sbjct: 112 KGVERLK----NAGITVEVGLLEKQAQELNKIFF 141 >gi|39996788|ref|NP_952739.1| riboflavin biosynthesis protein RibD [Geobacter sulfurreducens PCA] gi|39983676|gb|AAR35066.1| riboflavin biosynthesis protein RibD [Geobacter sulfurreducens PCA] gi|307634902|gb|ADI84522.2| 2,5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone deaminase and 5-amino-6-(5'-phosphoribosylamino)uracil reductase [Geobacter sulfurreducens KN400] Length = 369 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 57/150 (38%), Gaps = 23/150 (15%) Query: 4 GNVFMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M AL A+ + N + VG V V ++ +R K T HAE+ A+R Sbjct: 5 HENMMRRALSLARKGIGKTSPNPV-VGCVIVREGVVVGEGWHR----KAGTPHAEVHALR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + D+YVTLEPC CA A+ A + R++ G +P G Sbjct: 60 EAG-----PLARGADVYVTLEPCSHFGRTPPCADALVAAGVARVFVGMVDPNPTVCGKGI 114 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 ++ G+ + R I + F Sbjct: 115 TRLEAVG----IQVITGVLGKECRLINEPF 140 >gi|283834269|ref|ZP_06354010.1| riboflavin biosynthesis protein RibD [Citrobacter youngae ATCC 29220] gi|291069791|gb|EFE07900.1| riboflavin biosynthesis protein RibD [Citrobacter youngae ATCC 29220] Length = 367 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++M+ AL+ A + P VG V V + +I+ + HAE+ A+R Sbjct: 2 QDELYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGYHYRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKAQ-----GATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEVEQLNKGFLKRMR 143 >gi|169627158|ref|YP_001700807.1| cytidine/deoxycytidylate deaminase [Mycobacterium abscessus ATCC 19977] gi|169239125|emb|CAM60153.1| Probable cytidine/deoxycytidylate deaminase [Mycobacterium abscessus] Length = 166 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 42/94 (44%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F ++ A+ P + V + +++ + NR + D TAHAEILAIR C L Sbjct: 3 FAQRTIDLARRNVEEGGRPFATIIVKDGAVLAESPNRVAQTNDPTAHAEILAIREACTRL 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E L +++ PC MC A+ + + Sbjct: 63 GTEHLAGSTIFILALPCPMCLGALYYCSPDEVVF 96 >gi|289583345|ref|YP_003481755.1| CMP/dCMP deaminase zinc-binding protein [Natrialba magadii ATCC 43099] gi|289532843|gb|ADD07193.1| CMP/dCMP deaminase zinc-binding protein [Natrialba magadii ATCC 43099] Length = 156 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 1/143 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 M A + A+ A R + P G+V V +N ++ A NR D+ H E+ Sbjct: 7 DHEEHMHRAFDLAREAVARGDRPFGSVLVRDNTVVDSASNRVVTEDDIRRHPELHLAYRA 66 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 R E+ +Y + EPC MCA + A + R+ Y + G + AT Sbjct: 67 VRGFDPAGRAELVMYTSTEPCPMCAGGLVSAGLDRIVYSVGGDEIGEFTGDSPAVRAATI 126 Query: 123 HHSP-EIYPGISEQRSRQIIQDF 144 ++ + + R + + F Sbjct: 127 LKGVTDVVGPVLNEDGRHLHETF 149 >gi|86143346|ref|ZP_01061748.1| guanine deaminase [Leeuwenhoekiella blandensis MED217] gi|85830251|gb|EAQ48711.1| guanine deaminase [Leeuwenhoekiella blandensis MED217] Length = 149 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 18/136 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGA--------VAVLNNKIISRAGNRNRELKDVTA 52 +++ F+ A++ A+ V V + II+ NR E D T Sbjct: 3 LQQHKDFLKRAIDWAKRGKAA-------EGGGAFGAVIVKDGSIIAEGHNRVGENTDCTQ 55 Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--NPK-GGG 109 HAE+ I+ C+ L + L LY + EPC MC A A + +YYGAS + K G Sbjct: 56 HAELAMIQEACKKLGSKSLKGCILYTSCEPCLMCLGASRWAALDAVYYGASAADAKEAGY 115 Query: 110 IENGTQFYTLATCHHS 125 + + + + H Sbjct: 116 VYSQLFYNSHTGKRHQ 131 >gi|307265418|ref|ZP_07546974.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter wiegelii Rt8.B1] gi|306919532|gb|EFN49750.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter wiegelii Rt8.B1] Length = 360 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 21/148 (14%) Query: 5 NVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ N P VGAV V N KII + HAE+ A++ Sbjct: 2 EEYMKRALTLAEKGWGYTNPNPLVGAVIVKNGKIIGEGYHEYFGG----PHAEVNALKNA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 E + ++VTLEPC C I + I+R+Y +P NG + Sbjct: 58 V-----EDVKGSTMFVTLEPCSHYGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNGIKR 112 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E++ G+ E+ +R++ + F Sbjct: 113 LKEAG----IEVHVGMMEKDARKLNEIF 136 >gi|330959948|gb|EGH60208.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. maculicola str. ES4326] Length = 381 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ VG V V + +I+ + HAE+ A+R Sbjct: 12 DVHYMARALELARKGLYSTHPNPRVGCVIVRDGQIVGEGWHARAGE----PHAEVHALRQ 67 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P G Sbjct: 68 AGELA-----RGATAYVTLEPCSHQGRTPPCADALVDAGLARVVAAMQDPNPEVSGRGL- 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + + G+ E +R + + F K Sbjct: 122 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 150 >gi|302333432|gb|ADL23625.1| bifunctional pyrimidine reductase / riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 343 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 26/150 (17%) Query: 8 MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 1 MDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGNK----HAEVQALDMA--- 53 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 Q+ +Y+TLEPC C I +I ++ Y + N + Sbjct: 54 --QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDTHGD 104 Query: 120 ATCH-HSPEIYPGISEQRSRQIIQDFFKER 148 T H E+ + ++R+ Q+ QDFFK + Sbjct: 105 DTLRAHGIEVEC-VDDERASQLYQDFFKAK 133 >gi|86605105|ref|YP_473868.1| riboflavin biosynthesis protein RibD [Synechococcus sp. JA-3-3Ab] gi|86553647|gb|ABC98605.1| riboflavin biosynthesis protein RibD [Synechococcus sp. JA-3-3Ab] Length = 371 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 61/160 (38%), Gaps = 30/160 (18%) Query: 4 GNVFMSCALEEAQNAALRNEIP-----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +M L A++ R P V V V ++++ + HAE+LA Sbjct: 6 DRQWMERCLSLARSTPQR---PSPNPRVACVIVRGDQVVGEGVHLGAGQ----PHAEVLA 58 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++ + LYV LEPC C AI A IRR+ G +P Sbjct: 59 LQQAGSLA-----KGATLYVNLEPCNHYGRTPPCTEAILAAGIRRVVVGMQDPNPLVAGK 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF-FK--ERR 149 G + A E+ G+ EQ +++ + F F ++R Sbjct: 114 GIRRLQEAG----VEVTVGVLEQECQELNEGFAFAIVQKR 149 >gi|71892014|ref|YP_277744.1| pyrimidine deaminase/reductase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796120|gb|AAZ40871.1| pyrimidine deaminase/reductase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 379 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 57/155 (36%), Gaps = 23/155 (14%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 F++ AL+ A +P VG V V NNKII + AHAEI A+R Sbjct: 9 DKRFLTRALQLAWKGRFTT-MPNPNVGCVIVRNNKIIGEGYHIRAGE----AHAEIHALR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + + Y+TLEPC C A+ A I+R+ +P G Sbjct: 64 IAGNLAQ-----GATAYITLEPCSHYGRTPPCTTALINAGIKRVVVAMLDPHFYARGRGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ + + I + F K R Sbjct: 119 HLLQQAG----IEVQHSLMLPEAESINRGFLKRIR 149 >gi|257467357|ref|ZP_05631668.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Fusobacterium gonidiaformans ATCC 25563] gi|315918487|ref|ZP_07914727.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium gonidiaformans ATCC 25563] gi|313692362|gb|EFS29197.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium gonidiaformans ATCC 25563] Length = 359 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 61/152 (40%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M ALE A++ R N P VGAV V N KII + + HAE+ A++ Sbjct: 2 EDLEYMHLALELAKHGEGRVNPNPLVGAVVVKNGKIIGKGYHHEYGG----PHAEVFALQ 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E +YVTLEPC CA I + I+R +P G Sbjct: 58 EAG-----EEAKGATIYVTLEPCSHYGKTPPCAKKIIDSGIKRCVISMGDPNPLVGGKGI 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ G+ E +R + + F K Sbjct: 113 SMMRDAG----IEVEIGLCETEARALNRVFLK 140 >gi|153001671|ref|YP_001367352.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS185] gi|151366289|gb|ABS09289.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS185] Length = 384 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 MS A++ A+ R VG V V +N+I+ ++ HAE+ A+RM Sbjct: 11 DTQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGE----PHAEVHALRM 66 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ ++R+ +P G Q Sbjct: 67 AG-----EHARGATAYVTLEPCSHYGRTPPCAFALINIGVKRVVVAVEDPNPQVAGRGIQ 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ + + F K Sbjct: 122 MLRDAG----IEVDVGLHRDEAYALNLGFMKR 149 >gi|306833066|ref|ZP_07466197.1| riboflavin biosynthesis protein RibD [Streptococcus bovis ATCC 700338] gi|304424775|gb|EFM27910.1| riboflavin biosynthesis protein RibD [Streptococcus bovis ATCC 700338] Length = 351 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 19/145 (13%) Query: 4 GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ A+ A+ + VGAV V N ++I+R + + HAE AI Sbjct: 2 HENYMAQAIAAAKQGFRQIYTNPLVGAVIVKNGRVIARGAHLQYGHE----HAEKNAI-- 55 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E L LYVTLEPC C AI A I+++ G +P G + Sbjct: 56 -LHCEVPEELANSTLYVTLEPCHHTGKQPPCTQAIVEAGIKKVVVGQLDPNPLVAGKGLE 114 Query: 116 FYTLATCHHSPEIYPGISEQRSRQI 140 F E+ + E +R + Sbjct: 115 FLKSQG----IEVVTQVLENEARAL 135 >gi|158312920|ref|YP_001505428.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec] gi|158108325|gb|ABW10522.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec] Length = 188 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 49/132 (37%), Gaps = 33/132 (25%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M A A + P GAV V + +I++R NR D TAHAE+ +IR Sbjct: 2 NHEELMGEATRLATQSVENGWGGPFGAVIVKDGEIVARGQNRVLLTGDPTAHAEVESIRK 61 Query: 62 GCRILSQE--------------------------------ILPEVDLYVTLEPCTMCAAA 89 ++L+ E +L +Y PC MC +A Sbjct: 62 AIQVLNPEGPTIAPEEQDLATLELVPRPEGSPDRVPKRAKMLMGYSIYTAGIPCPMCMSA 121 Query: 90 ISLARIRRLYYG 101 I +RI +YY Sbjct: 122 IYWSRISDVYYA 133 >gi|329929844|ref|ZP_08283520.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. HGF5] gi|328935822|gb|EGG32283.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. HGF5] Length = 366 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 59/150 (39%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI-PV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +MS AL+ A+ A + I PV G V V + + + R T HAE+ A+ Sbjct: 5 NDEFYMSLALDLAERAQGQTGINPVVGCVVVKDGALAGVGTHLER----GTPHAEVHALN 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C+ + +RR+ +P G Sbjct: 61 MAG-----PKAAGSTVYVTLEPCSHYGATPPCSERLIAKGVRRVVVACEDPNPLVAGRGI 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 Q A E+ GI + R+ ++ + F Sbjct: 116 QMLRAAG----IEVETGILKDRALRLNEAF 141 >gi|311248289|ref|XP_003123051.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-specific adenosine deaminase-like protein 3-like [Sus scrofa] Length = 351 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 63/173 (36%), Gaps = 42/173 (24%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR--MGC 63 M A+ AQ AA R VGAV V ++++ HA ++ I Sbjct: 177 MERAVWAAQQAASRGLRAVGAVVVDPASGRVLATGH-DCSGTATPLLHAAMVCIDLVAQG 235 Query: 64 RILSQEILP------------------------------------EVDLYVTLEPCTMCA 87 + L DLYVT EPC MCA Sbjct: 236 QGRGTYDLTHHPACSFAPAAAPESVRVGSVRKLEEDMDGLPYVCTGYDLYVTREPCAMCA 295 Query: 88 AAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 A+ +R+RR++YGA +P G + + + +H + + G+ E + Q+ Sbjct: 296 MALVHSRVRRVFYGAPSPD-GALGTHFRIHARPDLNHRFQAFRGVLEAQCCQL 347 >gi|331005895|ref|ZP_08329246.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [gamma proteobacterium IMCC1989] gi|330420291|gb|EGG94606.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [gamma proteobacterium IMCC1989] Length = 397 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 22/156 (14%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FMS A++ A+ P VG V V N ++IS + AHAEI A++ Sbjct: 6 DDHRFMSLAIQLAEKGRYTTRPNPCVGCVLVKNGQVISEGWHYRAGE----AHAEIHALQ 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAIS---LARIRRLYYGASNPKGGGIE 111 + E + YVTLEPC+ CA A++ I R+ YG +P Sbjct: 62 QLPIEVKAENI---TAYVTLEPCSHQGRTGSCAMALADRTNTGIIRVVYGMEDPNPLVAG 118 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G + C + + EQ++ + Q FF+ Sbjct: 119 KGLAILRESGC----VVEGPLMEQQAAALNQGFFRR 150 >gi|298293742|ref|YP_003695681.1| CMP/dCMP deaminase zinc-binding protein [Starkeya novella DSM 506] gi|296930253|gb|ADH91062.1| CMP/dCMP deaminase zinc-binding protein [Starkeya novella DSM 506] Length = 240 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 50/143 (34%), Gaps = 32/143 (22%) Query: 6 VFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A A + + P GAV V + +II R NR HAEI AI Sbjct: 57 KFMEEATRLAIESVEKGWGGPFGAVIVKDGEIIGRGQNRVLLTGIPVFHAEITAIMDASA 116 Query: 65 ILSQE-------------------------------ILPEVDLYVTLEPCTMCAAAISLA 93 L+ + +L ++Y+ PC MC +AI + Sbjct: 117 RLNPKALLGSDYGAGTILEMIPREPGSPDPVPERARMLKGCEIYINGAPCPMCMSAIYWS 176 Query: 94 RIRRLYYGASNPKGGGIENGTQF 116 RI +Y+ AS I F Sbjct: 177 RIDHVYFAASLKDTSAIGFDDAF 199 >gi|301381786|ref|ZP_07230204.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. tomato Max13] gi|302061014|ref|ZP_07252555.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. tomato K40] gi|302130534|ref|ZP_07256524.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 378 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ VG V V + +I+ + + HAE+ A+R Sbjct: 9 DVHYMAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGE----PHAEVHALRE 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P +G Sbjct: 65 AGELA-----RGATAYVTLEPCSHQGRTPPCADALISAGLARVVAAMQDPNPQVAGSGLL 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E +R + + F K Sbjct: 120 RLMTAG----ISVQCGVLESEARALNKGFIKR 147 >gi|281421474|ref|ZP_06252473.1| riboflavin biosynthesis protein RibD [Prevotella copri DSM 18205] gi|281404546|gb|EFB35226.1| riboflavin biosynthesis protein RibD [Prevotella copri DSM 18205] Length = 345 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 55/151 (36%), Gaps = 20/151 (13%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 +FM L+ A+N VGAV V + +II + HAE+ A Sbjct: 23 DEMFMRRCLQLAKNGRENAKPNPMVGAVIVSGDGRIIGEGYHVRCGEG----HAEVNAF- 77 Query: 61 MGCRILSQEIL-PEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 E L + +YV+LEPC CA I ++R G +P G Sbjct: 78 -ASVKPEDEHLLSQATIYVSLEPCSHYGKTPPCADLIVRKGVKRCVCGCVDPFAKVQGRG 136 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ E ++ + F Sbjct: 137 IRKIREAG----IEVTVGVLEAECLELNKRF 163 >gi|300175372|emb|CBK20683.2| unnamed protein product [Blastocystis hominis] Length = 155 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 18/147 (12%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAG-NRNRELKDVTAHAEILAIRMGCRI 65 M A+E + AAL +PVG V + N I+ G NR D H IR Sbjct: 1 MRLAIELGRMAALNGNLPVGMVILDKNGNIMGECGDNRKNMFLD---HCCFAGIRNQSER 57 Query: 66 LS------------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 ++ + + D+ +T EPC MC + +R+RR+ YG + + G + Sbjct: 58 MNMQLGRKRASKEDPYLCTDYDIIITREPCIMCGMCLLHSRVRRVIYGC-DDRNGCFNSH 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQI 140 + +H ++ G+ E + RQ+ Sbjct: 117 IHLHYKEPLNHHFRVFRGVMEAQCRQL 143 >gi|213691299|ref|YP_002321885.1| riboflavin biosynthesis protein RibD [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522760|gb|ACJ51507.1| riboflavin biosynthesis protein RibD [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457366|dbj|BAJ67987.1| riboflavin biosynthesis protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 366 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 57/150 (38%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+E A+ A N P VGAV V +++II + + HAE A+R Sbjct: 2 DDAQYMGLAIELAKRGAGYVNPNPMVGAVIVKDDRIIGQGYHEMFGGL----HAERNALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + LYVTLEPC C AI + I R+ G + G Sbjct: 58 -----HCTQSPAGATLYVTLEPCCHYGKTPPCTEAIVESGIARVVVGTLDCNPVVSGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + H + G+ R +I+ F Sbjct: 113 RMLED----HGIRVDVGVLADECRHLIRVF 138 >gi|188584764|ref|YP_001916309.1| riboflavin biosynthesis protein RibD [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349451|gb|ACB83721.1| riboflavin biosynthesis protein RibD [Natranaerobius thermophilus JW/NM-WN-LF] Length = 380 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 21/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +KK +M AL+ A N P VGAV V N+ I+++ + HAE +A Sbjct: 5 IKKDRQYMDRALDLAWKGWGKTNPNPLVGAVLVKNDDIVAQGYHGRLGG----PHAEAVA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + R +YVTLEPC C I A ++R+ + +P Sbjct: 61 LEKAGREA-----SGTTMYVTLEPCCHYGKTPPCTDKIIEAGVKRVVIASLDPHEKMAGK 115 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ + + + + F Sbjct: 116 GVKKLRQAGI--KVEV--GLKKAEAEKQNEIF 143 >gi|206971231|ref|ZP_03232182.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH1134] gi|206734003|gb|EDZ51174.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH1134] Length = 370 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A++ Sbjct: 2 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + + +YVTLEPC C + ++R+ + NG Sbjct: 58 MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 113 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 146 >gi|91216505|ref|ZP_01253471.1| riboflavin biosynthesis protein ribD [Psychroflexus torquis ATCC 700755] gi|91185299|gb|EAS71676.1| riboflavin biosynthesis protein ribD [Psychroflexus torquis ATCC 700755] Length = 347 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 42/158 (26%), Positives = 64/158 (40%), Gaps = 21/158 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MK ++ LE A N P VG V V N++II + + D HAE+ Sbjct: 1 MKTNEFYIKRCLELAANGLGTT-YPNPLVGCVIVYNDRIIGEGWH--IKAGD--DHAEVR 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AI + Q +L + LYVTLEPC C+ I +I ++ G +P Sbjct: 56 AINS---VKDQSLLKKSILYVTLEPCSHYGKTPPCSDLIIEKKIPKIVIGTLDPFAKVAG 112 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + A + G+ E+ ++ + FF R Sbjct: 113 MGIKKLLAA----KRSVTVGVCEEACEELNKRFFTFHR 146 >gi|168181552|ref|ZP_02616216.1| riboflavin biosynthesis protein RibD [Clostridium botulinum Bf] gi|237796324|ref|YP_002863876.1| riboflavin biosynthesis protein RibD [Clostridium botulinum Ba4 str. 657] gi|182674971|gb|EDT86932.1| riboflavin biosynthesis protein RibD [Clostridium botulinum Bf] gi|229264059|gb|ACQ55092.1| riboflavin biosynthesis protein RibD [Clostridium botulinum Ba4 str. 657] Length = 365 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 59/156 (37%), Gaps = 25/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M+ N +M L+ A+ ++ P VGA+ V NNKII ++ HAE+ Sbjct: 1 MEDYNFYMEKTLKLAERG--EGKVNPNPKVGAIVVKNNKIIGEGYHKYFGG----PHAEV 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+R +YVTLEPC CA I I + +P Sbjct: 55 YALREAGEKA-----KGATIYVTLEPCSHYGKTPPCAEYIVKMGISKAIIAMKDPNPLVE 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G E+ I E+ S+++ + F K Sbjct: 110 GRGIDILKQNG----IEVVTEIMEKESKKLNEVFIK 141 >gi|229152312|ref|ZP_04280505.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus m1550] gi|228631274|gb|EEK87910.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus m1550] Length = 379 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A++ Sbjct: 11 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + + +YVTLEPC C + ++R+ + NG Sbjct: 67 MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 155 >gi|326800779|ref|YP_004318598.1| riboflavin biosynthesis protein RibD [Sphingobacterium sp. 21] gi|326551543|gb|ADZ79928.1| riboflavin biosynthesis protein RibD [Sphingobacterium sp. 21] Length = 348 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 22/157 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M ++M LE A+ + + P VGA+ V ++ II +R AHAE Sbjct: 1 MPNHEIYMRRCLELAELG--QGSVSPNPIVGALVVHHDTIIGEGWHRKYGE----AHAEP 54 Query: 57 LAIRMGCRILSQ--EILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108 AI ++L E +YVTLEPC CA + +++++ ++P Sbjct: 55 NAIADVFNRYPNAADLLRESTVYVTLEPCSHHGKTPPCADLLIKHQVKQVVVACNDPFEQ 114 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G A ++ G+ E+ ++ + + FF Sbjct: 115 VNGRGIAKLREAG----IDVLEGVLEEEAKFVNRRFF 147 >gi|126030525|pdb|2G6V|A Chain A, The Crystal Structure Of Ribd From Escherichia Coli gi|126030526|pdb|2G6V|B Chain B, The Crystal Structure Of Ribd From Escherichia Coli gi|134105114|pdb|2OBC|A Chain A, The Crystal Structure Of Ribd From Escherichia Coli In Complex With A Substrate Analogue, Ribose 5-Phosphate (Beta Form), Bound To The Active Site Of The Reductase Domain gi|134105115|pdb|2OBC|B Chain B, The Crystal Structure Of Ribd From Escherichia Coli In Complex With A Substrate Analogue, Ribose 5-Phosphate (Beta Form), Bound To The Active Site Of The Reductase Domain Length = 402 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + + AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 29 QDEYYXARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 84 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC C A+ A + R+ +P G Sbjct: 85 XAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASXQDPNPQVAGRGL 139 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 140 YRLQQAG----IDVSHGLXXSEAEQLNKGFLKRXR 170 >gi|34810500|pdb|1OX7|A Chain A, Crystal Structure Of Yeast Cytosine Deaminase Apo-Enzyme: Inorganic Zinc Bound gi|34810501|pdb|1OX7|B Chain B, Crystal Structure Of Yeast Cytosine Deaminase Apo-Enzyme: Inorganic Zinc Bound Length = 161 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 13/143 (9%) Query: 9 SCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 A EEA +P+G + + ++ R N + T H EI + R+ Sbjct: 19 DIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNXRFQKGSATLHGEISTLENCGRLE 78 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATCHHS 125 ++ + LY TL PC C AI I R G + N K G + L T H Sbjct: 79 G-KVYKDTTLYTTLSPCDXCTGAIIXYGIPRCVVGENVNFKSKGEK------YLQTRGHE 131 Query: 126 PEIYPGISEQRSRQIIQDFFKER 148 + + ++R ++I + F ER Sbjct: 132 VVV---VDDERCKKIXKQFIDER 151 >gi|228909942|ref|ZP_04073763.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis IBL 200] gi|228849777|gb|EEM94610.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis IBL 200] Length = 379 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A++ Sbjct: 11 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + + +YVTLEPC C + ++R+ + NG Sbjct: 67 MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 155 >gi|319427244|gb|ADV55318.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase, RibD [Shewanella putrefaciens 200] Length = 384 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 MS A++ A+ R VG V V +N+II ++ HAE+ A+RM Sbjct: 11 DIQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIIGEGYHQKAGE----PHAEVHALRM 66 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ ++R+ +P G Q Sbjct: 67 AG-----ERARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQ 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ + + F K Sbjct: 122 MLRDAG----IEVDVGLHRDEAYALNLGFMKR 149 >gi|50083525|ref|YP_045035.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Acinetobacter sp. ADP1] gi|49529501|emb|CAG67213.1| bifunctional protein [Includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP reductase) ] [Acinetobacter sp. ADP1] Length = 362 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 21/153 (13%) Query: 2 KKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ + +MS AL A+ A R VG V V + I+ R HAE+ A+ Sbjct: 5 ERDHYWMSQALALAKTAQFRTRPNPAVGCVIVKDQHIVGRGSTAPVGG----PHAEVFAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R YVTLEPC CA A+ A + R+ +P G Sbjct: 61 REAGVQAQN-----ATAYVTLEPCSHYGRTPPCANALIEAGVSRVVIATLDPNPLVAGKG 115 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A + ++ G+ E++++++ + F K Sbjct: 116 QTMLNQAGI--TTQV--GVLEEQAQELNRGFLK 144 >gi|254442809|ref|ZP_05056285.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Verrucomicrobiae bacterium DG1235] gi|198257117|gb|EDY81425.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Verrucomicrobiae bacterium DG1235] Length = 151 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 21/149 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 +++ FM A+ EA P VGAV V + +I+++ +D HAE Sbjct: 4 IQRDESFMRAAVCEAVRGDAVKTSPNPRVGAVIVEDGEIVAKGH----FERDGGPHAERQ 59 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 A+ R +YVTLEPC+ C AI A IRR+ GAS+P Sbjct: 60 ALEALGRKPK----EGAVIYVTLEPCSTQGRTGACTDAILEAGIRRVVVGASDPTEEHRG 115 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQI 140 NG + A E+ G+ + + Sbjct: 116 NGVRVLEAAG----VEVVSGVLDLECSAL 140 >gi|289432876|ref|YP_003462749.1| riboflavin biosynthesis protein RibD [Dehalococcoides sp. GT] gi|288946596|gb|ADC74293.1| riboflavin biosynthesis protein RibD [Dehalococcoides sp. GT] Length = 365 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 25/151 (16%) Query: 6 VFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +MS AL A+ A ++ P VGAV V N +++ + + D HAEI+A++ Sbjct: 2 KYMSQALSLAKLA--IGQVSPNPSVGAVIVKNGEVVGQGFTQP-PGGD---HAEIVALKQ 55 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 LYVTLEPC C ++ + I+ +Y + G + Sbjct: 56 AAEKA-----KGATLYVTLEPCCHQGRTPPCTGSVIASGIKEVYIATLDDNPLVSGKGKK 110 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A +++ G+ E+ +RQ+ + +FK Sbjct: 111 ELEAAG----IKVHLGMMEREARQMNEAYFK 137 >gi|227327505|ref|ZP_03831529.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 378 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++M+ ALE A+ P VG V V + +I+ + HAE+ A+R Sbjct: 12 QDELYMARALELARRGCFTTAPNPNVGCVIVRDGEIVGEGYHFRAGE----PHAEVHALR 67 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M E YVTLEPC CA A+ A + R+ +P G Sbjct: 68 MAG-----ERARGATAYVTLEPCSHHGRTPPCADALITAGVSRVVAAMQDPNPQVAGRGL 122 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + ++ F K R Sbjct: 123 HRLQQAG----IAVSHGLMMAEAEKVNVGFLKRMR 153 >gi|296504605|ref|YP_003666305.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus thuringiensis BMB171] gi|296325657|gb|ADH08585.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus thuringiensis BMB171] Length = 370 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A++ Sbjct: 2 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + + +YVTLEPC C + ++R+ + NG Sbjct: 58 MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 113 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 146 >gi|212702196|ref|ZP_03310324.1| hypothetical protein DESPIG_00207 [Desulfovibrio piger ATCC 29098] gi|212674401|gb|EEB34884.1| hypothetical protein DESPIG_00207 [Desulfovibrio piger ATCC 29098] Length = 380 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 38/146 (26%), Positives = 57/146 (39%), Gaps = 19/146 (13%) Query: 7 FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL A+N P VGAV V + ++++R + HAE+ +R R Sbjct: 9 FMREALTLAENGRWSACPNPTVGAVLVRDGQVVARGWHH--AAGQP--HAEVECLRDAQR 64 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + L VTLEPC C+ A+ A I+R+ G +P + Sbjct: 65 QGIDP--AQCTLVVTLEPCNHYGKTPPCSEAVLAAGIKRVVIGLYDPTPKAAGGAERLRA 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144 E+ + EQ R + DF Sbjct: 123 A-----GVEVIGPVCEQECRDQVADF 143 >gi|298529749|ref|ZP_07017152.1| riboflavin biosynthesis protein RibD [Desulfonatronospira thiodismutans ASO3-1] gi|298511185|gb|EFI35088.1| riboflavin biosynthesis protein RibD [Desulfonatronospira thiodismutans ASO3-1] Length = 371 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 62/152 (40%), Gaps = 19/152 (12%) Query: 1 MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + FM AL A+ A VGA+ ++I+ + +R HAE+ A Sbjct: 1 MNQSE-FMLKALGLARQAKGFTAPNPCVGALVTCGDRIMGKGWHRAPGEN----HAEVEA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + L +YVTLEPC C AA+ A I + GA +P Sbjct: 56 IENA--RENGADLSSCRMYVTLEPCNHHGRTPPCTAAVIQAGIPEIIIGARDPNSQVQGG 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G +F +H + G+ EQ+ +I DF Sbjct: 114 GAEFLR----NHGLRVTVGVEEQKCLDLIADF 141 >gi|146293872|ref|YP_001184296.1| riboflavin biosynthesis protein RibD [Shewanella putrefaciens CN-32] gi|145565562|gb|ABP76497.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Shewanella putrefaciens CN-32] Length = 384 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 MS A++ A+ R VG V V +N+II ++ HAE+ A+RM Sbjct: 11 DIQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIIGEGYHQKAGE----PHAEVHALRM 66 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ ++R+ +P G Q Sbjct: 67 AG-----ERARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQ 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ + + F K Sbjct: 122 MLRDAG----IEVDVGLHRDEAYALNLGFMKR 149 >gi|217076388|ref|YP_002334104.1| riboflavin biosynthesis protein RibD [Thermosipho africanus TCF52B] gi|217036241|gb|ACJ74763.1| riboflavin biosynthesis protein RibD [Thermosipho africanus TCF52B] Length = 343 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 58/152 (38%), Gaps = 25/152 (16%) Query: 5 NVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM AL+ A+ + P VGAV V + KIIS ++ HAE AI Sbjct: 2 EKFMKLALKLAKKG--TGRVSPNPLVGAVIVKDGKIISTGYHKRYGD----FHAERNAIL 55 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + L L+V LEPC C I ++I +++ +P G Sbjct: 56 NA-----KTSLEGSTLFVNLEPCCHHGKTPPCTDLIIKSKISQVFISILDPNPLVNGKGV 110 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 E++ G+ E+ + + + F K Sbjct: 111 DILRKNG----IEVHVGLLEKEASYLNRVFIK 138 >gi|300812786|ref|ZP_07093184.1| riboflavin biosynthesis protein RibD [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496238|gb|EFK31362.1| riboflavin biosynthesis protein RibD [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 351 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 20/148 (13%) Query: 1 MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M A+ A+ A VG+ V + K+++ +++ HAE Sbjct: 1 MASDEEYMRLAIAAARKAGNATWRNPRVGSCLVKDGKVLATGFHQHYGG----FHAERDT 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I L+ E L +YVTLEPC C I + I+R+ GA++P Sbjct: 57 I----SKLTPEQLSNSTIYVTLEPCCHYGKQPPCTQLIIDSGIKRVVVGATDPHSLVTGK 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQI 140 G A E+ G+ + + Q+ Sbjct: 113 GIAALRQAGL----EVSTGLLAKEASQL 136 >gi|77919046|ref|YP_356861.1| riboflavin biosynthesis protein RibD [Pelobacter carbinolicus DSM 2380] gi|77545129|gb|ABA88691.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pelobacter carbinolicus DSM 2380] Length = 371 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 21/148 (14%) Query: 5 NVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A++ A+ R VGA+ V + +I+ R + K HAEI A+R Sbjct: 6 ENFMRQAIDLARRGEGRTRPNPAVGALIVKDGEIVGRGFH----PKAGQPHAEIYALREA 61 Query: 63 CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + D+YVTLEPC+ CA AI A + R+Y G +P G + Sbjct: 62 G-----DRARGADMYVTLEPCSHHGRTGPCADAIIEAGLARVYVGTLDPNPQVAGGGIRK 116 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E++ G+ E R+II F Sbjct: 117 LQGAG----IEVHCGVLENLCRRIIAPF 140 >gi|30022196|ref|NP_833827.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus cereus ATCC 14579] gi|228960377|ref|ZP_04122030.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar pakistani str. T13001] gi|229111585|ref|ZP_04241136.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock1-15] gi|229129391|ref|ZP_04258362.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus BDRD-Cer4] gi|29897753|gb|AAP11028.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus cereus ATCC 14579] gi|228653996|gb|EEL09863.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus BDRD-Cer4] gi|228671967|gb|EEL27260.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock1-15] gi|228799401|gb|EEM46365.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar pakistani str. T13001] Length = 379 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A++ Sbjct: 11 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + + +YVTLEPC C + ++R+ + NG Sbjct: 67 MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 155 >gi|257063444|ref|YP_003143116.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Slackia heliotrinireducens DSM 20476] gi|256791097|gb|ACV21767.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Slackia heliotrinireducens DSM 20476] Length = 371 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 55/153 (35%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M M A+E A+ AA N P VGAV V + ++I + HAE A Sbjct: 1 MTADEKMMRRAIELARTAAGWTNPNPLVGAVIVKDGRVIGEGCHERYGDL----HAERNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + E +YVTLEPC CA A+ A I R+ G+ +P Sbjct: 57 L-----ASCTESPQGATMYVTLEPCSHTGKQPPCADALVEAGIARVVVGSRDPNPLVSGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G A ++ Q I FF Sbjct: 112 GIARLRAAG----IQVEEDFLRQECDGINPVFF 140 >gi|120598057|ref|YP_962631.1| riboflavin biosynthesis protein RibD [Shewanella sp. W3-18-1] gi|120558150|gb|ABM24077.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Shewanella sp. W3-18-1] Length = 384 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 MS A++ A+ R VG V V +N+II ++ HAE+ A+RM Sbjct: 11 DIQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIIGEGYHQKAGE----PHAEVHALRM 66 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ ++R+ +P G Q Sbjct: 67 AG-----ERARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQ 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ + + F K Sbjct: 122 MLRDAG----IEVDVGLHRDEAYALNLGFMKR 149 >gi|117925508|ref|YP_866125.1| CMP/dCMP deaminase, zinc-binding [Magnetococcus sp. MC-1] gi|117609264|gb|ABK44719.1| CMP/dCMP deaminase, zinc-binding protein [Magnetococcus sp. MC-1] Length = 150 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 50/144 (34%), Positives = 73/144 (50%), Gaps = 19/144 (13%) Query: 12 LEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 L +A +AA R E+PVGA+ ++S AGN D AHAEI+A+R R LS Sbjct: 20 LVQATDAAARGEVPVGALIYAAQGWVVSMAGNGPIGAHDPMAHAEIVAMRCAARRLSNYR 79 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130 L + + V+LEPC +C A LAR++ + Y + G ENG P+I P Sbjct: 80 LSGLCMVVSLEPCPVCQQATGLARLQSVRYLTAQ----GAENGFV---------RPDITP 126 Query: 131 GISEQRS-----RQIIQDFFKERR 149 + E R+ +++ FF+ RR Sbjct: 127 PLQEDRAFMTAGEMMLKIFFEFRR 150 >gi|261405997|ref|YP_003242238.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. Y412MC10] gi|261282460|gb|ACX64431.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. Y412MC10] Length = 369 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 59/150 (39%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI-PV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +MS AL+ A+ A + I PV G V V + + + R T HAE+ A+ Sbjct: 8 NDEFYMSLALDLAERAQGQTGINPVVGCVVVKDGALAGVGTHLER----GTPHAEVHALN 63 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C+ + +RR+ +P G Sbjct: 64 MAG-----PKAAGSTVYVTLEPCSHYGATPPCSERLIAEGVRRVVVACEDPNPLVAGRGI 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 Q A E+ GI + R+ ++ + F Sbjct: 119 QMLRAAG----IEVETGILKDRALRLNEAF 144 >gi|148983580|ref|ZP_01816899.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae SP3-BS71] gi|147923727|gb|EDK74839.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae SP3-BS71] Length = 360 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 40/145 (27%), Positives = 57/145 (39%), Gaps = 21/145 (14%) Query: 8 MSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A++ AQ A N P VGA+ V +N II + + HAE A++ CR Sbjct: 1 MKLAIKLAQKGAGYVNPNPMVGAIIVKDNHIIGQGYHEFFGG----PHAERNALKN-CRK 55 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 LYVTLEPC C AI + I R+ G+ + G + Sbjct: 56 SP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGVKILEE 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 ++ GI E +I+ F Sbjct: 112 NNL----QVTVGILENECLNLIKSF 132 >gi|166366741|ref|YP_001659014.1| riboflavin biosynthesis protein [Microcystis aeruginosa NIES-843] gi|166089114|dbj|BAG03822.1| riboflavin biosynthesis protein [Microcystis aeruginosa NIES-843] Length = 365 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 41/149 (27%), Positives = 52/149 (34%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M L A+ A R P VGAV V II + HAE+ A+R Sbjct: 8 DRTMMQRCLTLARQALGRTSPNPLVGAVIVQEGTIIGEGFH----PGAGQPHAEVFALRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 LYV LEPC C+ AI A I+++ G +P G Q Sbjct: 64 AAEKA-----RGATLYVNLEPCNHYGRTPPCSEAIVQAGIKKVVVGMIDPNPLVAGKGIQ 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E G+ E Q+ Q F Sbjct: 119 RLESAG----IETLVGVEESECLQLNQGF 143 >gi|296453532|ref|YP_003660675.1| riboflavin biosynthesis protein RibD [Bifidobacterium longum subsp. longum JDM301] gi|296182963|gb|ADG99844.1| riboflavin biosynthesis protein RibD [Bifidobacterium longum subsp. longum JDM301] Length = 366 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 57/150 (38%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+E A+ A N P VGAV V +++II + + HAE A+R Sbjct: 2 DDARYMGLAIELAKRGAGYVNPNPMVGAVIVKDDRIIGQGYHEMFGGL----HAERNALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + LYVTLEPC C AI + I R+ G + G Sbjct: 58 -----HCTQSPAGATLYVTLEPCCHYGKTPPCTEAIVESGIARVVVGTLDCNPVVSGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + H + G+ R +I+ F Sbjct: 113 RMLED----HGIRVDVGVLADECRHLIRVF 138 >gi|329768554|ref|ZP_08260041.1| riboflavin biosynthesis protein RibD [Gemella haemolysans M341] gi|328836595|gb|EGF86254.1| riboflavin biosynthesis protein RibD [Gemella haemolysans M341] Length = 356 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 40/145 (27%), Positives = 57/145 (39%), Gaps = 19/145 (13%) Query: 4 GNVFMSCALEEAQNAAL--RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM+ AL EA+ A VGA+ V +NKI++R + HAE AI Sbjct: 2 HEYFMNLALLEAKRGAKYTHTNPLVGAIIVKDNKIVARGSHLRY----GCEHAEKNAI-- 55 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + E + LYVTLEPC C AI I ++ +P G + Sbjct: 56 -STCKTPEKIFNSTLYVTLEPCNHKGKQPPCTEAILKMGISKVVVAQLDPNPIVSGKGIK 114 Query: 116 FYTLATCHHSPEIYPGISEQRSRQI 140 F E+ GI E+ + + Sbjct: 115 FLRDNG----IEVTTGILEKEAYNL 135 >gi|227113442|ref|ZP_03827098.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 378 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++M+ ALE A+ P VG V V + +I+ + HAE+ A+R Sbjct: 12 QDELYMARALELARRGCFTTAPNPNVGCVIVRDGEIVGEGYHFRAGE----PHAEVHALR 67 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M E YVTLEPC CA A+ A + R+ +P G Sbjct: 68 MAG-----ERARGATAYVTLEPCSHHGRTPPCADALITAGVSRVVAAMQDPNPQVAGRGL 122 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + ++ F K R Sbjct: 123 HRLQQAG----IAVSHGLMMAEAEKVNVGFLKRMR 153 >gi|146281221|ref|YP_001171374.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri A1501] gi|145569426|gb|ABP78532.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri A1501] Length = 359 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 56/148 (37%), Gaps = 21/148 (14%) Query: 8 MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+ A+ VG V V + +++ + HAE+ A+R Sbjct: 1 MARALQLARKGLYSTHPNPRVGCVIVADGELVGEGWHVRAGE----PHAEVHALRQAG-- 54 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E YVTLEPC CA A+ A + R+ +P NG + Sbjct: 55 ---ERARGATAYVTLEPCSHYGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGNGLERLRS 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R++ F K Sbjct: 112 AG----IEVASGVLEGEARELNAGFIKR 135 >gi|116748817|ref|YP_845504.1| riboflavin biosynthesis protein RibD [Syntrophobacter fumaroxidans MPOB] gi|116697881|gb|ABK17069.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Syntrophobacter fumaroxidans MPOB] Length = 363 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 40/147 (27%), Positives = 54/147 (36%), Gaps = 21/147 (14%) Query: 8 MSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A A R P VGAV V ++ + HAE+ A+R Sbjct: 1 MKRALRLAAKGAGRTSPNPMVGAVVVRGETTVAEGFHEFVGG----PHAEVNALRQAGDK 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 LYVTLEPC C A+ + + + G +P G G F Sbjct: 57 A-----RGATLYVTLEPCNHQGRTPPCTRAVLDSGVATVVIGMEDPNPGVRGGGASFLRS 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146 H ++ GI E+ R + Q F K Sbjct: 112 ----HGLRVHAGILEKECRALNQPFIK 134 >gi|229047804|ref|ZP_04193384.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH676] gi|228723596|gb|EEL74961.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH676] Length = 379 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A++ Sbjct: 11 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + + +YVTLEPC C + ++R+ + NG Sbjct: 67 MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 RTLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 155 >gi|238783633|ref|ZP_04627654.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia bercovieri ATCC 43970] gi|238715511|gb|EEQ07502.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia bercovieri ATCC 43970] Length = 369 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 36/159 (22%), Positives = 54/159 (33%), Gaps = 25/159 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M+ +M+ A E A+ P VG V V + +I+ + HAE+ Sbjct: 1 MQPDEFYMARAFELARMGRFT--TPPNPNVGCVLVRDGEIVGEGYHLRAGE----PHAEV 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+RM YVTLEPC CA A+ A + R+ +P Sbjct: 55 HALRMAGEKA-----RGATAYVTLEPCSHHGRTPPCADALVAAGVIRVVAAMQDPNPQVA 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A + G+ + + F K R Sbjct: 110 GRGLYKLKQAG----IAVDHGLMLAEAEAVNLGFLKRMR 144 >gi|295093779|emb|CBK82870.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Coprococcus sp. ART55/1] Length = 382 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 57/152 (37%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A+E A+ N P VGAV V + +II + HAE R Sbjct: 11 DPSYMRRAIELARRGTGAVNPNPLVGAVIVKDGRIIGEGYHVRYGEL----HAE----RA 62 Query: 62 G-CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + Q +YVTLEPC C AI +IR++Y G+ +P G Sbjct: 63 AFASLKDQADAEGAVMYVTLEPCCHFGKQPPCVDAIIEHKIRKVYCGSDDPNAMVAGKGF 122 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + A E+Y + I FFK Sbjct: 123 KRLRDAG----IEVYTHCLKAECDAINGIFFK 150 >gi|126663421|ref|ZP_01734418.1| riboflavin biosynthesis protein RibD [Flavobacteria bacterium BAL38] gi|126624369|gb|EAZ95060.1| riboflavin biosynthesis protein RibD [Flavobacteria bacterium BAL38] Length = 346 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 21/154 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M ++ +E A+N P VG+V V NKII ++ HAE+ Sbjct: 1 MTTHEFYIKRCIELAKNGLGTT-YPNPLVGSVIVYENKIIGEGWHKKAGE----PHAEVN 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ + + +L E +YV+LEPC C I + I + G +P Sbjct: 56 AVNS---VKDKSLLKEATIYVSLEPCSHFGKTPPCCDLIIVNEIPNVVVGTVDPFAKVAG 112 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 NG + + ++ GI E ++ + FF Sbjct: 113 NGIKKLVESG----KKVTVGILEDECNELNKRFF 142 >gi|302869363|ref|YP_003838000.1| CMP/dCMP deaminase [Micromonospora aurantiaca ATCC 27029] gi|302572222|gb|ADL48424.1| CMP/dCMP deaminase zinc-binding [Micromonospora aurantiaca ATCC 27029] Length = 141 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 1/106 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ A+E A A E P ++ V + ++ N KDVTAH E+ R Sbjct: 4 DDEAFLRRAVELADRAGASGERPFASLLVGADGTVLIEDHNTVVSDKDVTAHPELKLARW 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 R L+ E ++ + +PC MC AI+ + + R+ Y S + Sbjct: 64 AARQLAPEAAVATTMFTSCQPCPMCTVAINASGLGRVVYALSTEQF 109 >gi|229192323|ref|ZP_04319287.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus ATCC 10876] gi|228591103|gb|EEK48958.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus ATCC 10876] Length = 379 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A++ Sbjct: 11 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGIGAHLRAGEE----HAEVHALQ 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + + +YVTLEPC C + ++R+ + NG Sbjct: 67 MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIERGVKRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 155 >gi|218899272|ref|YP_002447683.1| riboflavin biosynthesis protein RibD [Bacillus cereus G9842] gi|218541932|gb|ACK94326.1| riboflavin biosynthesis protein RibD [Bacillus cereus G9842] Length = 370 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A++ Sbjct: 2 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + + +YVTLEPC C + ++R+ + NG Sbjct: 58 MASQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 113 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 146 >gi|57640359|ref|YP_182837.1| riboflavin biosynthesis protein RibD [Thermococcus kodakarensis KOD1] gi|57158683|dbj|BAD84613.1| riboflavin biosynthesis protein RibD [Thermococcus kodakarensis KOD1] Length = 353 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 47/122 (38%), Gaps = 14/122 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + FM ALE A+ N P VGAV V + KII +R K HAEI AI Sbjct: 3 DEDEKFMRLALELAKRGEGWTNPNPMVGAVIVKDGKIIGVGWHRKFGEK----HAEINAI 58 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + +YVTLEPC CA I +R+ +P G Sbjct: 59 EDAKAK--GYDVRGATMYVTLEPCSHWGKQPPCADRIIQEGFKRVVVAMEDPNPLVAGQG 116 Query: 114 TQ 115 + Sbjct: 117 IE 118 >gi|228902621|ref|ZP_04066772.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis IBL 4222] gi|228967148|ref|ZP_04128184.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar sotto str. T04001] gi|228792517|gb|EEM40083.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar sotto str. T04001] gi|228857062|gb|EEN01571.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis IBL 4222] Length = 379 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A++ Sbjct: 11 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + + +YVTLEPC C + ++R+ + NG Sbjct: 67 MASQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 155 >gi|153947163|ref|YP_001402077.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia pseudotuberculosis IP 31758] gi|152958658|gb|ABS46119.1| riboflavin biosynthesis protein RibD [Yersinia pseudotuberculosis IP 31758] Length = 369 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 55/157 (35%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ +M+ A E A+ + P VG V V + +I+ + HAE+ A Sbjct: 1 MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM YVTLEPC CA A+ A + R+ +P Sbjct: 57 LRMAGEKA-----RGATAYVTLEPCSHYGRTPPCADALVAAGVIRVVAAMQDPNPEVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A + G+ + + F K R Sbjct: 112 GLYKLKQAG----IAVDHGLMLAEAEAVNLGFLKRMR 144 >gi|326563101|gb|EGE13374.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis 12P80B1] Length = 350 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 18/157 (11%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +++ +M A+ EA+ R VG V V ++ +I + + K HAEI A Sbjct: 7 IQQDIYYMQLAIAEAKKGIYTTRPNPAVGCVLVKDSLVIGQGYH----PKAGQPHAEIFA 62 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + YVTLEPC CA A+ A +RR+ + +P N Sbjct: 63 L--ADAKAQGFDTKGATAYVTLEPCSHTGRTPPCADALIAANLRRVVVASLDPNPKVAGN 120 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + + E+ G+ +Q++ + F K R Sbjct: 121 GIKKLQ----NAGIEVLVGVCDQQAAALNLGFLKAMR 153 >gi|331018226|gb|EGH98282.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 378 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ VG V V + +I+ + + HAE+ A+R Sbjct: 9 DVHYMAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGE----PHAEVHALRE 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P +G Sbjct: 65 AGELA-----RGATAYVTLEPCSHQGRTPPCADALISAGLARVVAAMQDPNPQVAGSGLL 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E +R + + F K Sbjct: 120 RLMTAG----ISVQCGVLEGEARALNKGFIKR 147 >gi|28867918|ref|NP_790537.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. tomato str. DC3000] gi|28851154|gb|AAO54232.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. tomato str. DC3000] Length = 381 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ VG V V + +I+ + + HAE+ A+R Sbjct: 12 DVHYMAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGE----PHAEVHALRE 67 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P +G Sbjct: 68 AGELA-----RGATAYVTLEPCSHQGRTPPCADALISAGLARVVAAMQDPNPQVAGSGLL 122 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E +R + + F K Sbjct: 123 RLMTAG----ISVQCGVLEGEARALNKGFIKR 150 >gi|291084824|ref|ZP_06542690.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 76 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 37/69 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL A+ A E+PVGAV V N+++I NR D TAHAEI+A+R G Sbjct: 7 DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66 Query: 63 CRILSQEIL 71 +L L Sbjct: 67 GLVLQNYRL 75 >gi|317122797|ref|YP_004102800.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Thermaerobacter marianensis DSM 12885] gi|315592777|gb|ADU52073.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Thermaerobacter marianensis DSM 12885] Length = 427 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 44/156 (28%), Positives = 61/156 (39%), Gaps = 23/156 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 FM AL A A R P VGAV V + +++ +R HAEI A+ Sbjct: 34 TDRAFMRRALRLASRARGRT-HPNPMVGAVIVRDGEVVGEGFHRRAGE----PHAEIEAL 88 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 RM E LYVTLEPC C AI A +RR+ +P Sbjct: 89 RMAG-----ERARGATLYVTLEPCCHYGRTPPCTGAIISAGLRRVVVAMVDPDP----RV 139 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ E+ +R++ + + RR Sbjct: 140 AGRGIAALAAAGIEVAVGLEEEAARRLNEAYIVHRR 175 >gi|57234067|ref|YP_181903.1| riboflavin biosynthesis protein RibD [Dehalococcoides ethenogenes 195] gi|57224515|gb|AAW39572.1| riboflavin biosynthesis protein RibD [Dehalococcoides ethenogenes 195] Length = 365 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 25/151 (16%) Query: 6 VFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +MS AL A+ A ++ P VGAV V N +++ + + D HAEI+A++ Sbjct: 2 KYMSQALSLAKLA--IGQVSPNPAVGAVIVKNGEVVGQGFTQP-PGGD---HAEIVALKQ 55 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 LYVTLEPC C AI + I+ +Y + G + Sbjct: 56 AAEKA-----KGAALYVTLEPCCHQGRTPPCTVAIIESGIKEVYIATLDDNPLVSGKGKK 110 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A +++ G+ E+ +RQ+ + +FK Sbjct: 111 ELEDAG----IKVHLGMMEREARQMNEAYFK 137 >gi|294141969|ref|YP_003557947.1| riboflavin biosynthesis protein RibD [Shewanella violacea DSS12] gi|293328438|dbj|BAJ03169.1| riboflavin biosynthesis protein RibD [Shewanella violacea DSS12] Length = 379 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 59/153 (38%), Gaps = 16/153 (10%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FMS A++ A+ P VG V L+++I+ + + HAE+ A+ Sbjct: 5 EDTEFMSRAIKLARRGLYTTRPNPCVGCVITLDDQILGEGFH--IQAGGP--HAEVHALA 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + SQ L YVTLEPC CA A+ I R+ +P G Sbjct: 61 MATKRASQAALKGATAYVTLEPCSHYGRTPPCAEALIKHGISRVVVAVEDPNPQVSGRGI 120 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + A E+ G+ + I F K Sbjct: 121 KMLRDAG----IEVDVGLLSDEAAGINPGFMKR 149 >gi|290474698|ref|YP_003467578.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Xenorhabdus bovienii SS-2004] gi|289174011|emb|CBJ80798.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase [Xenorhabdus bovienii SS-2004] Length = 369 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 54/157 (34%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +MS ALE A + P VG V V + I+ + HAE+ A Sbjct: 1 MTLDEKYMSRALELANQGRFTTSPNPNVGCVIVQGDHIVGEGFHVCAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM YVTLEPC CA A+ A I R+ +P Sbjct: 57 LRMAGGKA-----KGATAYVTLEPCSHHGKTPPCADALIAAGISRVVAAMQDPNPQVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A + G+ + + + F K R Sbjct: 112 GLYKLQQAG----IAVEHGVLMAEAEALNKGFLKRMR 144 >gi|300715569|ref|YP_003740372.1| riboflavin biosynthesis protein RibD [Erwinia billingiae Eb661] gi|299061405|emb|CAX58515.1| Riboflavin biosynthesis protein RibD [Erwinia billingiae Eb661] Length = 368 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 55/155 (35%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++M+ ALE A+ P VG V V + ++ + HAE+ A+R Sbjct: 2 SDEIWMARALELARRGRFTTTPNPNVGCVIVRDGVMVGEGYHFRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGDKAQ-----GATAYVTLEPCSHHGRTPPCCDALIAAGVSRVIAAMQDPNPEVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ Q + + + F K R Sbjct: 113 YRLQQAG----IEVSHGLMMQEAEALNRGFLKRMR 143 >gi|228986473|ref|ZP_04146609.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228773294|gb|EEM21724.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 358 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 44/146 (30%), Positives = 62/146 (42%), Gaps = 23/146 (15%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M ALE A A P VG+V V +N+I+ + HAEI AIRM Sbjct: 1 MKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGE----PHAEIHAIRMAG- 54 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 E +YVTLEPC+ CA AI A I+R+ +P G Q Sbjct: 55 ----EQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKRVVVATLDPNPLVSGRGIQILQ 110 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ E+ S+++ + F Sbjct: 111 DAG----IDVLVGVCEEESKKMNEVF 132 >gi|118591858|ref|ZP_01549253.1| putative deaminase [Stappia aggregata IAM 12614] gi|118435501|gb|EAV42147.1| putative deaminase [Stappia aggregata IAM 12614] Length = 155 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 51/127 (40%), Gaps = 6/127 (4%) Query: 8 MSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+ + + IP A V N +I+ R NR RE D TAHAE+ AIR CR Sbjct: 1 MEEAVSFSVDHVRDGGIPFTAFVVDRNGEILGRGVNRVREYHDPTAHAEVEAIRDACRTH 60 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ-----FYTLAT 121 L L + EPC MC + A + R+ + A + + F Sbjct: 61 GTVHLHGATLLASGEPCAMCYMSALDAGVSRILFAADRDEATAYGFDYRGSYRLFSDDPQ 120 Query: 122 CHHSPEI 128 SP + Sbjct: 121 SWRSPVV 127 >gi|317968925|ref|ZP_07970315.1| putative cytosine deaminase [Synechococcus sp. CB0205] Length = 144 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 4/102 (3%) Query: 9 SCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A EA+ IP+GAV + I++R N+ + D T+H E IR R Sbjct: 6 DAARAEAERGWSEGGIPIGAVLAQEDGTIVARGHNQRVQNGDPTSHGETQCIRNPGR--- 62 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 + E+ L TL PC MCA L RR+ G G Sbjct: 63 RRDWRELTLVTTLSPCPMCAGTAVLLGFRRVVIGERKTFQGA 104 >gi|148654182|ref|YP_001281275.1| riboflavin biosynthesis protein RibD [Psychrobacter sp. PRwf-1] gi|148573266|gb|ABQ95325.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Psychrobacter sp. PRwf-1] Length = 368 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 K+ +M+ A+EEA+ R VG V V NN I+ + + HAE+ A+ Sbjct: 28 KQDIYYMNLAIEEAKKGLFTTRPNPAVGCVIVNNNLIVGTGYH--PQAGQP--HAEVFAL 83 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R ++ YVTLEPC CA A+ + + R+ +P G Sbjct: 84 REA-----KDNAKGATAYVTLEPCSHTGRTPPCAQALINSGVSRVVVAGLDPNPKVAGRG 138 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+S Q++ Q+ F K R Sbjct: 139 IAMLKAAG----IEVTVGVSTQQAEQLNLGFLKAMR 170 >gi|218230924|ref|YP_002368914.1| riboflavin biosynthesis protein RibD [Bacillus cereus B4264] gi|218158881|gb|ACK58873.1| riboflavin biosynthesis protein RibD [Bacillus cereus B4264] Length = 370 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 61/158 (38%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A++ Sbjct: 2 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + + +YVTLEPC C + ++R+ + NG Sbjct: 58 MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + E+ G+ E + + + FF K +R Sbjct: 113 RRLEET----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 146 >gi|22124907|ref|NP_668330.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia pestis KIM 10] gi|45440597|ref|NP_992136.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia pestis biovar Microtus str. 91001] gi|51595284|ref|YP_069475.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia pseudotuberculosis IP 32953] gi|108808668|ref|YP_652584.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia pestis Antiqua] gi|108811070|ref|YP_646837.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia pestis Nepal516] gi|145600077|ref|YP_001164153.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia pestis Pestoides F] gi|149364971|ref|ZP_01887006.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia pestis CA88-4125] gi|162418167|ref|YP_001607523.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia pestis Angola] gi|165926574|ref|ZP_02222406.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar Orientalis str. F1991016] gi|165935961|ref|ZP_02224531.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar Orientalis str. IP275] gi|166011096|ref|ZP_02231994.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar Antiqua str. E1979001] gi|166213091|ref|ZP_02239126.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar Antiqua str. B42003004] gi|167398606|ref|ZP_02304130.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421644|ref|ZP_02313397.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423702|ref|ZP_02315455.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470057|ref|ZP_02334761.1| riboflavin biosynthesis protein RibD [Yersinia pestis FV-1] gi|170025475|ref|YP_001721980.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia pseudotuberculosis YPIII] gi|186894301|ref|YP_001871413.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia pseudotuberculosis PB1/+] gi|218930213|ref|YP_002348088.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia pestis CO92] gi|229838788|ref|ZP_04458947.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896058|ref|ZP_04511228.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Yersinia pestis Pestoides A] gi|229899356|ref|ZP_04514499.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Yersinia pestis biovar Orientalis str. India 195] gi|229901297|ref|ZP_04516419.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Yersinia pestis Nepal516] gi|270489486|ref|ZP_06206560.1| riboflavin biosynthesis protein RibD [Yersinia pestis KIM D27] gi|294504911|ref|YP_003568973.1| riboflavin biosynthesis protein RibD (includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase) [Yersinia pestis Z176003] gi|21957743|gb|AAM84581.1|AE013703_11 bifunctional pyrimidine deaminase/reductase [Yersinia pestis KIM 10] gi|45435454|gb|AAS61013.1| riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia pestis biovar Microtus str. 91001] gi|51588566|emb|CAH20174.1| bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis [Yersinia pseudotuberculosis IP 32953] gi|108774718|gb|ABG17237.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Yersinia pestis Nepal516] gi|108780581|gb|ABG14639.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia pestis Antiqua] gi|115348824|emb|CAL21778.1| riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia pestis CO92] gi|145211773|gb|ABP41180.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia pestis Pestoides F] gi|149291384|gb|EDM41458.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia pestis CA88-4125] gi|162350982|gb|ABX84930.1| riboflavin biosynthesis protein RibD [Yersinia pestis Angola] gi|165916106|gb|EDR34713.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar Orientalis str. IP275] gi|165921502|gb|EDR38699.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar Orientalis str. F1991016] gi|165990096|gb|EDR42397.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar Antiqua str. E1979001] gi|166205878|gb|EDR50358.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar Antiqua str. B42003004] gi|166960563|gb|EDR56584.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051110|gb|EDR62518.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057872|gb|EDR67618.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752009|gb|ACA69527.1| riboflavin biosynthesis protein RibD [Yersinia pseudotuberculosis YPIII] gi|186697327|gb|ACC87956.1| riboflavin biosynthesis protein RibD [Yersinia pseudotuberculosis PB1/+] gi|229681226|gb|EEO77320.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Yersinia pestis Nepal516] gi|229687758|gb|EEO79831.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Yersinia pestis biovar Orientalis str. India 195] gi|229695154|gb|EEO85201.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700981|gb|EEO89010.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Yersinia pestis Pestoides A] gi|262362977|gb|ACY59698.1| riboflavin biosynthesis protein RibD (includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase) [Yersinia pestis D106004] gi|262366897|gb|ACY63454.1| riboflavin biosynthesis protein RibD (includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase) [Yersinia pestis D182038] gi|270337990|gb|EFA48767.1| riboflavin biosynthesis protein RibD [Yersinia pestis KIM D27] gi|294355370|gb|ADE65711.1| riboflavin biosynthesis protein RibD (includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase) [Yersinia pestis Z176003] Length = 369 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 55/157 (35%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ +M+ A E A+ + P VG V V + +I+ + HAE+ A Sbjct: 1 MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM YVTLEPC CA A+ A + R+ +P Sbjct: 57 LRMAGEKA-----RGATAYVTLEPCSHYGRTPPCADALVAAGVIRVVAAMQDPNPEVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A + G+ + + F K R Sbjct: 112 GLYKLKQAG----IAVDHGLMLAEAEAVNLGFLKRMR 144 >gi|228922861|ref|ZP_04086159.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836916|gb|EEM82259.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 379 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A++ Sbjct: 11 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + + +YVTLEPC C + ++R+ + NG Sbjct: 67 MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ GI E + + + FF K +R Sbjct: 122 RRLEEA----RIEVTTGILEAEALLLNRYFFHYMKTKR 155 >gi|270308361|ref|YP_003330419.1| riboflavin biosynthesis protein, 5-amino-6-(5-phosphoribosylamino)uracil reductase, diaminohydroxyphosphoribosylaminopyrimidine deaminase [Dehalococcoides sp. VS] gi|270154253|gb|ACZ62091.1| riboflavin biosynthesis protein, 5-amino-6-(5-phosphoribosylamino)uracil reductase, diaminohydroxyphosphoribosylaminopyrimidine deaminase [Dehalococcoides sp. VS] Length = 365 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 25/151 (16%) Query: 6 VFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +MS AL A+ A ++ P VGAV V N +++ + + D HAEI+A++ Sbjct: 2 KYMSQALSLAKLA--IGQVSPNPSVGAVIVKNGEVVGQGFTQP-PGGD---HAEIVALKQ 55 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 LYVTLEPC C +I + I+ +Y + G + Sbjct: 56 AAEKA-----KGAALYVTLEPCCHQGRTPPCTGSIIESGIKEVYIATLDDNPLVSGKGKK 110 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + +++ G+ E+ +RQ+ + +FK Sbjct: 111 ELE----NAGIKVHLGMMEREARQMNEAYFK 137 >gi|148264237|ref|YP_001230943.1| riboflavin biosynthesis protein RibD [Geobacter uraniireducens Rf4] gi|146397737|gb|ABQ26370.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Geobacter uraniireducens Rf4] Length = 368 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 58/152 (38%), Gaps = 23/152 (15%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M A+ A+ R P VG V V + ++ + K T HAE+ A+R Sbjct: 5 HEKMMKRAIVLAKRGIGRT-APNPTVGCVIVKDGAVVGEGWH----KKAGTPHAEVHALR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + D+YVTLEPC CA A+ A++ R++ G +P G Sbjct: 60 QAGEMA-----RGADVYVTLEPCAHFGKTPPCADALIAAKVCRVHIGMVDPNPRVCGEGI 114 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ + E R + + F K Sbjct: 115 SMLRSAG----IEVVVSVLEDNCRSLNEPFIK 142 >gi|319790138|ref|YP_004151771.1| riboflavin biosynthesis protein RibD [Thermovibrio ammonificans HB-1] gi|317114640|gb|ADU97130.1| riboflavin biosynthesis protein RibD [Thermovibrio ammonificans HB-1] Length = 371 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 55/150 (36%), Gaps = 22/150 (14%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM AL EA + VGAV V ++++ + HAE +A+ Sbjct: 2 NDCYFMELALAEAYKGKGKTLPNPAVGAVVVREGRVVATGYH--EAPGRP--HAEAVALE 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 LYVTLEPC C I + ++R+ G +P Sbjct: 58 RAGDKA-----KGATLYVTLEPCNHYGRTPPCTEKIIASGVKRVVVGLRDPNPVASGGIE 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + E+ G+ ++R ++++DF Sbjct: 113 RLRGA-----GIEVTVGVLKERCFELVEDF 137 >gi|312830146|emb|CBX34988.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus ECT-R 2] Length = 347 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%) Query: 5 NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 2 SQFMDYAIQLANMVQGQTGVNPPVGAVVVNEGRIVGIGAHLRKGDK----HAEVQALDMV 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 Q+ +Y+TLEPC C I +I ++ Y + N Sbjct: 58 -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 105 Query: 117 YTLATCH-HSPEIYPGISEQRSRQIIQDFFKER 148 + T H E+ + ++R+ Q+ QDFFK + Sbjct: 106 HGDETLRAHGIEVEC-VDDERASQLYQDFFKAK 137 >gi|312143490|ref|YP_003994936.1| riboflavin biosynthesis protein RibD [Halanaerobium sp. 'sapolanicus'] gi|311904141|gb|ADQ14582.1| riboflavin biosynthesis protein RibD [Halanaerobium sp. 'sapolanicus'] Length = 381 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ ALE A+ VGAV V N +II ++ HAE+ A++ Sbjct: 8 TDIRYMARALEIAKKGEGSASPNPMVGAVLVKNGEIIGEGYHKFYGG----PHAEVYALK 63 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + + D+Y+TLEPC CA + + I+R +P G Sbjct: 64 EAGQNANN-----ADIYLTLEPCSHYGKTPPCADKLIKSGIKRAVIAMVDPNPEVSGRGI 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + A E+ G+ ++++ + + F K Sbjct: 119 ELLKEAG----IEVELGLMAEKAKDLNEVFLK 146 >gi|315607126|ref|ZP_07882130.1| riboflavin biosynthesis protein RibD [Prevotella buccae ATCC 33574] gi|315251180|gb|EFU31165.1| riboflavin biosynthesis protein RibD [Prevotella buccae ATCC 33574] Length = 322 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 56/151 (37%), Gaps = 18/151 (11%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 FM L+ A+N VGAV V + +II + HAE+ A Sbjct: 8 TDEKFMRRCLQLARNGRQNAKPNPMVGAVIVSPDGRIIGEGYHVRCGEG----HAEVNAF 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 C +L E +YV+LEPC CA I +RR+ G +P G Sbjct: 64 ASVCPEDEA-LLHESTIYVSLEPCSHFGKTPPCADLIVRKGVRRVVCGCIDPFAEVSGRG 122 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ EQ + + F Sbjct: 123 VERIRKAG----IEVTVGVLEQECLTLNRRF 149 >gi|261749554|ref|YP_003257240.1| riboflavin biosynthesis protein RibD [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497647|gb|ACX84097.1| riboflavin biosynthesis protein RibD [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 347 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 22/160 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +FM A++ A+N P VG + N I+S + + HAE+ A Sbjct: 1 MNHKKIFMYRAIQLAKNGLGLTSPNPMVGCLIERNGLILSEGWHYKVGMD----HAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I R+ + +L + LYVTLEPC C I ++I R+ G +P Sbjct: 57 IN---RVENTSLLTDSTLYVTLEPCVHFGKTPPCVDLIIKSKIPRVVIGIQDPCHKVNGL 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 G Q E+ + + R + + FF +++R Sbjct: 114 GIQKLRENG----IEVIENVLRDQCRILNKRFFTFYEKKR 149 >gi|331012488|gb|EGH92544.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 249 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+N VG V V + +I+ + HAE+ A+R Sbjct: 9 DVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGE----PHAEVHALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P G Sbjct: 65 AGELA-----RGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGL- 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + + G+ E +R + + F K Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147 >gi|253735372|ref|ZP_04869537.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus TCH130] gi|269203407|ref|YP_003282676.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus ED98] gi|253726661|gb|EES95390.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus TCH130] gi|262075697|gb|ACY11670.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus ED98] Length = 343 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 26/150 (17%) Query: 8 MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 1 MDYAIQLANMVQGQTGVNPPVGAVVVNEGRIVGIGAHLRKGDK----HAEVQALDMA--- 53 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 Q+ +Y+TLEPC C I +I ++ Y + N + Sbjct: 54 --QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDTHGD 104 Query: 120 ATCH-HSPEIYPGISEQRSRQIIQDFFKER 148 T H E+ + ++R+ Q+ QDFFK + Sbjct: 105 ETLRAHGIEVEC-VDDERASQLYQDFFKAK 133 >gi|118616295|ref|YP_904627.1| hypothetical protein MUL_0449 [Mycobacterium ulcerans Agy99] gi|118568405|gb|ABL03156.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length = 102 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 43/91 (47%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 F A++ A+ P V V + ++++ + N+ + D TAHAEILAIR C L Sbjct: 4 FAQRAIDFARLNVAEGGRPFATVIVKDGQVLAESANKVAQTNDPTAHAEILAIRAACTKL 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 E L YV PC MC + L +R Sbjct: 64 GTEQLFGTTFYVLAHPCPMCLGSQELNGGKR 94 >gi|238791408|ref|ZP_04635046.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia intermedia ATCC 29909] gi|238729024|gb|EEQ20540.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia intermedia ATCC 29909] Length = 369 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 36/159 (22%), Positives = 55/159 (34%), Gaps = 25/159 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M+ +M+ A E A+ P VG V V + +I+ + HAE+ Sbjct: 1 MQTDEFYMARAFELARLGRFT--TPPNPNVGCVLVRDGEIVGEGYHLRAGE----PHAEV 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+RM YVTLEPC CA A+ A + R+ +P Sbjct: 55 HALRMAGEKA-----RGATAYVTLEPCSHHGCTPPCADALVAAGVIRVVAAMQDPNPQVA 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A + G+ ++ + F K R Sbjct: 110 GRGLYKLKQAG----IAVDHGLMLAQAEAVNLGFLKRMR 144 >gi|302525979|ref|ZP_07278321.1| cytidine/deoxycytidine deaminase [Streptomyces sp. AA4] gi|302434874|gb|EFL06690.1| cytidine/deoxycytidine deaminase [Streptomyces sp. AA4] Length = 147 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 15/142 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 ++ A EEA+ +P+GA + K++ R NR + D + HAE A R R Sbjct: 6 LAVAREEAEAGKAEGGVPIGAALFDRDGKLLGRGHNRRVQDGDPSLHAETAAFRAAGR-- 63 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + + + TL PC C+ + I + G S GG H Sbjct: 64 -RPHYRDTIMVTTLSPCWYCSGLVRQFGIPHVVIGESRTFTGGHGWLAD--------HGV 114 Query: 127 EIYPGISEQ-RSRQIIQDFFKE 147 I + + ++ +F + Sbjct: 115 RI--DLLDDPACVALMTEFIER 134 >gi|119962643|ref|YP_947330.1| guanine deaminase [Arthrobacter aurescens TC1] gi|119949502|gb|ABM08413.1| guanine deaminase [Arthrobacter aurescens TC1] Length = 160 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 34/129 (26%), Positives = 55/129 (42%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ + +++ A++ A + P GAV V + + NR D TAHAE++AIR Sbjct: 7 QQRDEYLNLAIQLAVHNVSDGGGPFGAVVVTADGTVHEGVNRVTRDHDPTAHAEVVAIRR 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + L LY + EPC +C +A ARI +Y+ A + Sbjct: 67 AAAASKRFDLTGSVLYASCEPCPLCLSATLWARIGHVYFAADRHGAAKAGFDDAVFYEYF 126 Query: 122 CHHSPEIYP 130 PE+ P Sbjct: 127 AGTRPELLP 135 >gi|326562323|gb|EGE12649.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis 103P14B1] gi|326575527|gb|EGE25452.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis 101P30B1] Length = 350 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 18/157 (11%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +++ +M A+ EA+ R VG V V ++ +I + + K HAEI A Sbjct: 7 IQQDIYYMQLAIAEAKKGIYTTRPNPAVGCVLVKDSLVIGQGYH----PKAGQPHAEIFA 62 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + YVTLEPC CA A+ A +RR+ + +P N Sbjct: 63 L--ADAKARGFDTKGATAYVTLEPCSHTGRTPPCADALIAANLRRVVVASLDPNPKVAGN 120 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + + E+ G+ +Q++ + F K R Sbjct: 121 GIKKLQ----NAGIEVLVGVCDQQAAALNLGFLKAMR 153 >gi|184155252|ref|YP_001843592.1| riboflavin biosynthesis protein [Lactobacillus fermentum IFO 3956] gi|183226596|dbj|BAG27112.1| riboflavin biosynthesis protein [Lactobacillus fermentum IFO 3956] Length = 352 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 63/160 (39%), Gaps = 23/160 (14%) Query: 1 MKKGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M FM AL EA + P VGAV V + ++++ + AHAE A Sbjct: 1 MSSDEQFMQLALAEAAKGGSATWKNPQVGAVIVKDGQLLATGYHHQYGQ----AHAERDA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I LS E L +YVTLEPC C+ + + R+ +P Sbjct: 57 I----SKLSNEQLAGATIYVTLEPCFHYGKQPPCSQLLIDSHFARVVVATIDPHQVVGGK 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQD---FFKERR 149 G A ++ G+ + ++ + + F++++R Sbjct: 113 GIAQLKAAG----IDVEVGLLKDQAEALNRHYFYFYRQQR 148 >gi|301320513|gb|ADK69156.1| cytidine and deoxycytidylate deaminase zinc-binding region [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 147 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 4/150 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59 M N + + +++ A N+IPV + +N I+S + N + KD++ HAEI AI Sbjct: 1 MDDFNNILDLMIYQSKKAIKHNDIPVCCCIIDDNNNILSMSINTRYKNKDISQHAEINAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L+ L E L TLEPC MC +AI +I +YY + K G I+N Sbjct: 61 NKLINKLNTFNLSEYKLITTLEPCMMCYSAIKQVKIDTIYYLVDSYKFG-IQNNYSI-ND 118 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +I + +++ DFF +R Sbjct: 119 QNLN-LIQIKNHNKQSEYIKLLNDFFINKR 147 >gi|42560609|ref|NP_975060.1| cytosine deaminase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492105|emb|CAE76702.1| CYTOSINE DEAMINASE [Mycoplasma mycoides subsp. mycoides SC str. PG1] Length = 155 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 4/150 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59 M N + + +++ A N+IPV + +N I+S + N + KD++ HAEI AI Sbjct: 9 MDDFNNILDLMIYQSKKAIKHNDIPVCCCIIDDNNNILSMSINTRYKNKDISQHAEINAI 68 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L+ L E L TLEPC MC +AI +I +YY + K G I+N Sbjct: 69 NKLINKLNTFNLSEYKLITTLEPCMMCYSAIKQVKIDTIYYLVDSYKFG-IQNNYSI-ND 126 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +I + +++ DFF +R Sbjct: 127 QNLN-LIQIKNHNKQSEYIKLLNDFFINKR 155 >gi|117919545|ref|YP_868737.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Shewanella sp. ANA-3] gi|117611877|gb|ABK47331.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Shewanella sp. ANA-3] Length = 381 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 57/152 (37%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N MS A++ A+ R VG V V +N+I+ ++ HAE+ A+RM Sbjct: 7 DNQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGE----PHAEVHALRM 62 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ ++R+ +P G Q Sbjct: 63 AGELA-----RGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQ 117 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ + + F K Sbjct: 118 MLRDAG----IEVDVGLHRDEAYALNLGFMKR 145 >gi|118468256|ref|YP_888948.1| cytosine deaminase [Mycobacterium smegmatis str. MC2 155] gi|118169543|gb|ABK70439.1| cytosine deaminase [Mycobacterium smegmatis str. MC2 155] Length = 146 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 53/141 (37%), Gaps = 13/141 (9%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + A+EEA+ IP+GA + +++ NR + D + HAE A R Sbjct: 4 EQMLDVAVEEARKGLSEGGIPIGAALFSADGELLGSGHNRRVQDGDPSIHAETDAFRAAG 63 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R + + TL PC C+ + I L G + GG E T Sbjct: 64 RQRG---YRKTIMVTTLSPCWYCSGLVRQFNIGALVIGEARTFSGGHEWLADNGVSVTL- 119 Query: 124 HSPEIYPGISEQRSRQIIQDF 144 + ++R ++QDF Sbjct: 120 --------LDDERCVTMMQDF 132 >gi|251771354|gb|EES51935.1| riboflavin biosynthesis protein RibD [Leptospirillum ferrodiazotrophum] Length = 397 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 54/150 (36%), Gaps = 22/150 (14%) Query: 4 GNVFMSCALEEAQNAAL--RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL A+ VGAV V + K++ +R + HAE+LA+R Sbjct: 10 DRRWMQRALVLAEKGRDTVAPNPMVGAVVVRDGKVVGEGYHREAGQE----HAEVLALRA 65 Query: 62 GCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + LYV LEPC C AI A + R+ +P G Sbjct: 66 AG-----DRARGATLYVNLEPCCHVEKRTPPCTEAIVQAGVARVVVAMRDPNPRVFGRGL 120 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ G+ R+ + + F Sbjct: 121 ERLAGQRL----DVSEGLFAARAFEQNRGF 146 >gi|313674792|ref|YP_004052788.1| cmp/dcmp deaminase zinc-binding protein [Marivirga tractuosa DSM 4126] gi|312941490|gb|ADR20680.1| CMP/dCMP deaminase zinc-binding protein [Marivirga tractuosa DSM 4126] Length = 138 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 11/142 (7%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A++ A+ + P GAV V + +S N AHAEI AI Sbjct: 4 EFWMKLAIDLAK----ERKTPFGAVLVDPEGQHVS-GYNTTILDG-AVAHAEINAISK-I 56 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT---LA 120 + L + E+ L+ T+EPC MC +AI A I + YG N + Sbjct: 57 KQLDYDRAEELTLFTTVEPCPMCMSAIIWAGIGEVIYGCDISTASKYGNQINIRAKKIAS 116 Query: 121 TCHHSPEIYPGISEQRSRQIIQ 142 ++P I G+ + + Sbjct: 117 ESWYAPIIKGGLLAIECEGLFK 138 >gi|228959585|ref|ZP_04121266.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|228800077|gb|EEM47013.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar pakistani str. T13001] Length = 358 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 23/146 (15%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M ALE A A P VG+V V +N+I+ + HAEI AIRM Sbjct: 1 MKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMAG- 54 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 E +YVTLEPC+ CA AI A I+++ +P G + Sbjct: 55 ----EQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQ 110 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ S+++ + F Sbjct: 111 DAG----IEVLVGVCEEESKKMNEVF 132 >gi|296101536|ref|YP_003611682.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055995|gb|ADF60733.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 367 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++M+ A++ AQ + P VG V V + +I+ + HAE+ A+R Sbjct: 2 QDEMYMARAMKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----RGATAYVTLEPCSHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 ++ G+ Q + I + F K R Sbjct: 113 YRLQQEG----IDVSHGLMMQDAEAINKGFLKRMR 143 >gi|163815505|ref|ZP_02206878.1| hypothetical protein COPEUT_01670 [Coprococcus eutactus ATCC 27759] gi|158449142|gb|EDP26137.1| hypothetical protein COPEUT_01670 [Coprococcus eutactus ATCC 27759] Length = 382 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 6 VFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A+E A+ N P VGAV V +II + HAE R Sbjct: 13 AYMRRAIELAKKGTGAVNPNPLVGAVIVKAGRIIGEGYHVRYGEL----HAE----RAAF 64 Query: 64 RILSQE-ILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L+ +YVTLEPC C AI +IR++Y G+ +P G + Sbjct: 65 ASLADPAEAEGAVMYVTLEPCCHFGKQPPCVDAIIEHKIRKVYCGSDDPNAMVAGKGFRR 124 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+Y + + FFK Sbjct: 125 LRDAG----IEVYTHCLKDECDALNDIFFK 150 >gi|134105070|pdb|2O7P|A Chain A, The Crystal Structure Of Ribd From Escherichia Coli In Complex With The Oxidised Nadp+ Cofactor In The Active Site Of The Reductase Domain gi|134105071|pdb|2O7P|B Chain B, The Crystal Structure Of Ribd From Escherichia Coli In Complex With The Oxidised Nadp+ Cofactor In The Active Site Of The Reductase Domain Length = 380 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + + AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 7 QDEYYXARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC C A+ A + R+ +P G Sbjct: 63 XAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASXQDPNPQVAGRGL 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 118 YRLQQAG----IDVSHGLXXSEAEQLNKGFLKRXR 148 >gi|53804252|ref|YP_114101.1| riboflavin biosynthesis protein RibD [Methylococcus capsulatus str. Bath] gi|53758013|gb|AAU92304.1| riboflavin biosynthesis protein RibD [Methylococcus capsulatus str. Bath] Length = 378 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + FM+ AL A+ + P VG+V V N+++ ++ HAEI A+R Sbjct: 17 EDHCFMAHALRLAEKGMYTTDPNPRVGSVVVQGNEVVGAGWHQRAGG----PHAEIAALR 72 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +YVTLEPC CA A+ A + R+ +P G Sbjct: 73 DA-----RGRAAGATVYVTLEPCSHHGRTPPCADALIEAGVHRVVAAMQDPNPRVAGQGL 127 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + A E+ G+ + + ++ Q F K R Sbjct: 128 ERLRRAG----IEVSCGLLAREAERLNQGFVKRMR 158 >gi|291279486|ref|YP_003496321.1| bifunctional riboflavin biosynthesis protein RibD [Deferribacter desulfuricans SSM1] gi|290754188|dbj|BAI80565.1| bifunctional riboflavin biosynthesis protein RibD [Deferribacter desulfuricans SSM1] Length = 384 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 62/152 (40%), Gaps = 21/152 (13%) Query: 1 MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K + M ++ A + VGA+ V + KII R + +HAEI A Sbjct: 1 MIKPHDIMKECVQLALLGKGYTKTNPIVGAIIVKDGKIIGRGYHEEYGK----SHAEINA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + E L DLYVTLEPC C AI +I+R++ G +P Sbjct: 57 MNDAV-----EPLEGADLYVTLEPCSIHGKTPPCVDAIIENKIKRVFIGVVDPNPKIAGQ 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A E++ G E+ II+DF Sbjct: 112 GIIKLIEAG----VEVFVGFDEELCASIIEDF 139 >gi|257067810|ref|YP_003154065.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810] gi|256558628|gb|ACU84475.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810] Length = 158 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 44/93 (47%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 + A+E A + R P GAV + + NR D TAHAE+ AIR CR Sbjct: 10 LHRAVELAVASVARGGGPFGAVVLTADGTAVEGANRVTAAHDPTAHAEVEAIREACRRSG 69 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L LY + EPC MC A+ AR+ R+ + Sbjct: 70 SHELRGAVLYASCEPCPMCLASALWARVERVEF 102 >gi|281424669|ref|ZP_06255582.1| riboflavin biosynthesis protein RibD [Prevotella oris F0302] gi|281401039|gb|EFB31870.1| riboflavin biosynthesis protein RibD [Prevotella oris F0302] Length = 318 Score = 106 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 17/150 (11%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M L+ A+N VGAV V +++II + HAE+ A Sbjct: 2 EHEYYMKRCLQLAENGRQNAKPNPMVGAVIVAHDRIIGEGYHVRCGEG----HAEVNAF- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 R +++LPE +YV+LEPC CA I I+R G +P G Sbjct: 57 ASVRPEDEKLLPEATIYVSLEPCSHYGKTPPCADLIISKGIKRCVCGCVDPFAKVQGRGI 116 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 Q A E+ + EQ + + F Sbjct: 117 QRMRDAG----IEVVVDVMEQECLALNRRF 142 >gi|160876409|ref|YP_001555725.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS195] gi|160861931|gb|ABX50465.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS195] gi|315268599|gb|ADT95452.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS678] Length = 384 Score = 106 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 MS A++ A+ P VG V V +N+I+ ++ HAE+ A+RM Sbjct: 11 DTQMMSRAIQLARKGFYTTRPNPCVGCVIVKDNQIVGEGYHQKAGE----PHAEVHALRM 66 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ ++R+ +P G Q Sbjct: 67 AG-----EHARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQ 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ + + F K Sbjct: 122 MLRDAG----IEVDVGLHRDEAYALNLGFMKR 149 >gi|114046668|ref|YP_737218.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Shewanella sp. MR-7] gi|113888110|gb|ABI42161.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Shewanella sp. MR-7] Length = 381 Score = 106 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N MS A++ A+ R VG V V +N+I+ ++ HAE+ A+RM Sbjct: 7 DNQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGE----PHAEVHALRM 62 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ ++R+ +P G Q Sbjct: 63 AGELA-----RGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQ 117 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A ++ G+ + + F K Sbjct: 118 MLRDAG----IQVDVGLHRDEAYALNLGFMKR 145 >gi|58698891|ref|ZP_00373757.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of Drosophila ananassae] gi|58534587|gb|EAL58720.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of Drosophila ananassae] Length = 167 Score = 106 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 59/153 (38%), Gaps = 25/153 (16%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + FMS AL A+ + P VG V V + I+S HAE++A Sbjct: 2 TDDHFMSIALRLAEKNL--GNVAPNPAVGCVIVKDGTIVSEGY----TGIGGRPHAEVVA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 ++ +Y+TLEPC C A I A I+R+ +P Sbjct: 56 LQNAKDSTH-----GATIYITLEPCCHHGVTGPCTAKIIKASIKRVVIATIDPDSRVSGR 110 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A E+ GI ++ ++++ FF Sbjct: 111 GMKALKEAG----IEVEQGIMQKEAKELNVGFF 139 >gi|270339625|ref|ZP_06005479.2| riboflavin biosynthesis protein RibD [Prevotella bergensis DSM 17361] gi|270334334|gb|EFA45120.1| riboflavin biosynthesis protein RibD [Prevotella bergensis DSM 17361] Length = 365 Score = 106 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 57/151 (37%), Gaps = 18/151 (11%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 +M L+ A+N VGAV V + +II + HAE+ A Sbjct: 28 TDERYMRRCLQLARNGWQNAKPNPMVGAVIVSRDGRIIGEGYHVRCGEG----HAEVNAF 83 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + +L E +YV+LEPC CA I +RR+ G +P G Sbjct: 84 -ASVRPEDEVLLKESTVYVSLEPCSHWGKTPPCADLIVKKGVRRVVCGCIDPFSKVQGRG 142 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ EQ ++ + F Sbjct: 143 VAHIRKAG----IEVTVGVLEQECLELNRRF 169 >gi|218283800|ref|ZP_03489723.1| hypothetical protein EUBIFOR_02317 [Eubacterium biforme DSM 3989] gi|218215606|gb|EEC89144.1| hypothetical protein EUBIFOR_02317 [Eubacterium biforme DSM 3989] Length = 389 Score = 106 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 55/151 (36%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A++ A+ N P VGAV V + +II ++ HAE AI Sbjct: 16 TDQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGRIIGEGYHKKYGEL----HAERNAI- 70 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E +YVTLEPC C AI +I+++ G+ +P G Sbjct: 71 ----ASLTESAEGAVIYVTLEPCCHHGKTPPCTEAIIEQKIKKVVIGSRDPNPKVAGKGV 126 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 Q A + + ++ FF Sbjct: 127 QMLRKAG----VTVVEDFMGEECDRLNPVFF 153 >gi|85058629|ref|YP_454331.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Sodalis glossinidius str. 'morsitans'] gi|84779149|dbj|BAE73926.1| riboflavin biosynthesis protein RibD [Sodalis glossinidius str. 'morsitans'] Length = 375 Score = 106 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 56/157 (35%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M V+++ A E A+ P VG V V + +I+ ++ AHAE+ A Sbjct: 1 MDHDEVYLARAFELARRGRFTTAPNPNVGCVIVRDGRIVGEGYHQRAGY----AHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R YVTLEPC CA A+ A + R+ +P Sbjct: 57 LRQAGNAARC-----ATAYVTLEPCSHHGRTPPCADALIDAGVARVVAAMPDPNPQVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A E+ G+ + + F K R Sbjct: 112 GFYRLQQAG----IEVRHGLMLPEAEAVNPGFLKRMR 144 >gi|228998898|ref|ZP_04158483.1| RibD (Riboflavin-specific deaminase) [Bacillus mycoides Rock3-17] gi|228760914|gb|EEM09875.1| RibD (Riboflavin-specific deaminase) [Bacillus mycoides Rock3-17] Length = 370 Score = 106 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 57/151 (37%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ AQ A + P VGAV V + I+ + + HAE+ A+R Sbjct: 2 TDQEYMRIALQLAQSTAGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + +++R+ + +G Sbjct: 58 MAGDKA-----NGSTVYVTLEPCSHFGKTPPCCDLLIEKKVKRVVIATLDCNPLVSGSGA 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A + + E+ + + + FF Sbjct: 113 KRLQKAG----ISVTTSVLEEEATALNRYFF 139 >gi|229080603|ref|ZP_04213123.1| Riboflavin biosynthesis protein [Bacillus cereus Rock4-2] gi|228702704|gb|EEL55170.1| Riboflavin biosynthesis protein [Bacillus cereus Rock4-2] Length = 360 Score = 106 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 23/146 (15%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M ALE A A P VG+V V +N+I+ + HAEI AIRM Sbjct: 1 MKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMAG- 54 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 E +YVTLEPC+ CA AI A I+++ +P G + Sbjct: 55 ----EQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQ 110 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ S+++ + F Sbjct: 111 DAG----IEVLVGVCEEESKKMNEVF 132 >gi|289647764|ref|ZP_06479107.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. aesculi str. 2250] Length = 378 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+N VG V V + +I+ + HAE+ A+R Sbjct: 9 DVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGE----PHAEVHALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P G Sbjct: 65 AGELA-----RGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPDVSGRGL- 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + + G+ E +R + + F K Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147 >gi|289675578|ref|ZP_06496468.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. syringae FF5] Length = 194 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ VG V V +I+ + HAE+ A+R Sbjct: 9 DVHYMARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGE----PHAEVHALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P G Sbjct: 65 AGELA-----RGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGL- 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + + G+ E +R + + F K Sbjct: 119 ---LRLMNAGISVQCGVLESEARALNKGFLKR 147 >gi|317047149|ref|YP_004114797.1| riboflavin biosynthesis protein RibD [Pantoea sp. At-9b] gi|316948766|gb|ADU68241.1| riboflavin biosynthesis protein RibD [Pantoea sp. At-9b] Length = 370 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 53/154 (34%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ P VG V V + +I+ + HAE+ A+RM Sbjct: 3 DERYMARALELARRGCFTTTPNPNVGCVIVRDGEIVGEGWHHRAGE----PHAEVHALRM 58 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC C A+ A + R+ +P G Sbjct: 59 AGEKA-----RGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLY 113 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + I + F K R Sbjct: 114 RLQQAG----IAVSHGLMMNAAEAINRGFLKRMR 143 >gi|52425429|ref|YP_088566.1| RibD protein [Mannheimia succiniciproducens MBEL55E] gi|52307481|gb|AAU37981.1| RibD protein [Mannheimia succiniciproducens MBEL55E] Length = 373 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ FM A+E A+ P VG V V +I+ + + HAE++A+ Sbjct: 6 EQDRAFMQLAIELAEKGQFTTTPNPSVGCVLVKQGEIVGKGFHFKAGE----PHAEVMAM 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + YVTLEPC CA + A + ++ +P G Sbjct: 62 REAGK-----NAKGATAYVTLEPCSHFGRTPPCAKGLIEAGVVKVIAAMEDPNPSVAGQG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + A E G+ ++++ ++ + F K R Sbjct: 117 LKMLQQAG----IETAVGLLQEQAERLNRGFLKRMR 148 >gi|260596783|ref|YP_003209354.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Cronobacter turicensis z3032] gi|260215960|emb|CBA28583.1| Riboflavin biosynthesis protein ribD [Cronobacter turicensis z3032] Length = 367 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 51/155 (32%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ AL+ A VG V V + I+ + HAE+ A+R Sbjct: 2 SDEFYMARALKLASQGRFTTHPNPRVGCVIVNDGVIVGEGFHLRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGDKA-----RGATAYVTLEPCSHHGRTPPCCDALINAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ + + + F K R Sbjct: 113 YRLQQAG----VEVSHGLMMSEAEALNKGFLKRMR 143 >gi|226314399|ref|YP_002774295.1| riboflavin biosynthesis protein RibD [Brevibacillus brevis NBRC 100599] gi|226097349|dbj|BAH45791.1| riboflavin biosynthesis protein RibD [Brevibacillus brevis NBRC 100599] Length = 368 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 24/160 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ + +M ALE A++A + P VGAV V + I+ + HAE+ A Sbjct: 1 MEQDSKYMDLALELARSARGQTSPNPMVGAVIVKDGTIVGMGAHLRAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM +YVTLEPC CA A+ A +RR+ +P Sbjct: 57 LRMAGEKAQ-----GATVYVTLEPCSHYGKTPPCAEALIAAAVRRVVVATLDPNPLVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 G + A E+ G+ E+ ++ + + FF + RR Sbjct: 112 GMEMLRAAG----VEVAVGVREEEAKALNEVFFHYIQTRR 147 >gi|119945176|ref|YP_942856.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Psychromonas ingrahamii 37] gi|119863780|gb|ABM03257.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Psychromonas ingrahamii 37] Length = 387 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 60/152 (39%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ A+ A+ + P VG V V NN I+ ++ L HAE+ A+ + Sbjct: 10 DKYYMAHAILLAKKGRFTSSPNPNVGCVIVANNIIVGEGYHQKAGLG----HAEVNALAI 65 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A++ A I+R+ +P +G + Sbjct: 66 AKDKAM-----GATCYVTLEPCSHFGRTPPCALALTKAGIKRVIIAMVDPNPKVAGDGIK 120 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A ++ G+ + + + + F K Sbjct: 121 ILEKAG----IKVDLGLLKNEAMDLNRGFIKR 148 >gi|291545679|emb|CBL18787.1| riboflavin biosynthesis protein RibD [Ruminococcus sp. SR1/5] Length = 253 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 54/151 (35%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A++ A+ N P VGAV V + +II ++ HAE AI Sbjct: 2 TDQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGRIIGEGYHKKYGEL----HAERNAI- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E +YVTLEPC C I +IR++ G+ +P G Sbjct: 57 ----ASLTEPAEGAVIYVTLEPCCHHGKTPPCTETIIEQKIRKVVIGSRDPNPKVAGKGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 Q A + + Q+ FF Sbjct: 113 QMLREAG----VTVVEDFMREECDQLNPVFF 139 >gi|330988221|gb|EGH86324.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. lachrymans str. M301315] Length = 378 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+N VG V V + +I+ + HAE+ A+R Sbjct: 9 DVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGE----PHAEVHALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P G Sbjct: 65 AGELA-----RGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGL- 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + + G+ E +R + + F K Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147 >gi|71735090|ref|YP_276623.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555643|gb|AAZ34854.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322801|gb|EFW78894.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. glycinea str. B076] gi|320330413|gb|EFW86392.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. glycinea str. race 4] gi|330874037|gb|EGH08186.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. glycinea str. race 4] Length = 378 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+N VG V V + +I+ + HAE+ A+R Sbjct: 9 DVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGE----PHAEVHALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P G Sbjct: 65 AGELA-----RGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGL- 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + + G+ E +R + + F K Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147 >gi|113969440|ref|YP_733233.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Shewanella sp. MR-4] gi|113884124|gb|ABI38176.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Shewanella sp. MR-4] Length = 381 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N MS A++ A+ R VG V V +N+I+ ++ HAE+ A+RM Sbjct: 7 DNQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGE----PHAEVHALRM 62 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ ++R+ +P G Q Sbjct: 63 AGELA-----RGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQ 117 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A ++ G+ + + F K Sbjct: 118 MLRDAG----IQVDVGLHRDEAYALNLGFMKR 145 >gi|157694276|ref|YP_001488738.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Bacillus pumilus SAFR-032] gi|157683034|gb|ABV64178.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Bacillus pumilus SAFR-032] Length = 363 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 25/154 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M +M+ ALE A+ A++ + P VGAV V N+I+ + HAEI Sbjct: 1 MPHHERYMNLALENAR--AMKGQTSPNPLVGAVIVRENEIVGVGAHMKAGE----PHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 A++M +YVTLEPC+ CA A+ A + + A +P Sbjct: 55 HALKMAGDKA-----KGATIYVTLEPCSHHGRTGPCAEALVKAGVETVVVAALDPNPLVA 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A ++ G+ EQ S + + F Sbjct: 110 GRGIAILQDAG----IQVITGVLEQESILMNEVF 139 >gi|120405009|ref|YP_954838.1| CMP/dCMP deaminase [Mycobacterium vanbaalenii PYR-1] gi|119957827|gb|ABM14832.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium vanbaalenii PYR-1] Length = 164 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 52/141 (36%), Gaps = 13/141 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A+EEA+ IP+GA + ++ NR +L D + HAE A R R Sbjct: 25 LEVAVEEARKGLAEGGIPIGAALFSTDGALLGSGHNRRVQLGDPSVHAETDAFRNAGRQR 84 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + TL PC C+ + I + G S GG + T Sbjct: 85 G---YRSTIMVTTLSPCWYCSGLVRQFNIGAVVIGESRTFTGGHDWLADNGVDVTI---- 137 Query: 127 EIYPGISEQRSRQIIQDFFKE 147 + ++R +++DF Sbjct: 138 -----VDDERCVTMMRDFIAA 153 >gi|255020757|ref|ZP_05292816.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Acidithiobacillus caldus ATCC 51756] gi|254969819|gb|EET27322.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Acidithiobacillus caldus ATCC 51756] Length = 369 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 53/150 (35%), Gaps = 21/150 (14%) Query: 8 MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL A+ VGAV V + +I+ R + AHAE+ A+ Sbjct: 1 MAEALTLARRGLYSTHPNPRVGAVVVRDGQIVGRGAHLRAGD----AHAEVFALAQAG-- 54 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E LYVTLEPC C AI A + R+ ++P G Sbjct: 55 ---ERARGATLYVTLEPCCHHGRTPPCTDAILTAGVARVVIAIADPNPRVRGGGIALLQQ 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 ++ G + + + F + R Sbjct: 112 QGL----QVELGCLAEEATALNIGFVRRMR 137 >gi|148544108|ref|YP_001271478.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Lactobacillus reuteri DSM 20016] gi|184153479|ref|YP_001841820.1| riboflavin biosynthesis protein [Lactobacillus reuteri JCM 1112] gi|148531142|gb|ABQ83141.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Lactobacillus reuteri DSM 20016] gi|183224823|dbj|BAG25340.1| riboflavin biosynthesis protein [Lactobacillus reuteri JCM 1112] Length = 352 Score = 106 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 22/153 (14%) Query: 3 KGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM A+ EA A + P VGAV V N ++++R HAE AI Sbjct: 2 EDAYFMQMAIAEAAKAGNETWKNPRVGAVVVKNGQVLARGHTHEYGGI----HAERDAI- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 L+ + LYVTLEPC C+ AI A IRR+ ++P G Sbjct: 57 ---GKLTPKQGQGATLYVTLEPCNHYGKQPPCSQAIIDAGIRRVVIAETDPHKLVTGKGI 113 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQ--DFF 145 + G+ ++ ++ + DFF Sbjct: 114 ATLQQQN----IIVKTGVLKEAAQALNPYYDFF 142 >gi|117619328|ref|YP_857822.1| riboflavin biosynthesis protein RibD [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560735|gb|ABK37683.1| riboflavin biosynthesis protein RibD [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 369 Score = 106 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 55/156 (35%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +MS ALE A+ P VGAV V ++ ++ HAE+ A+ Sbjct: 4 QDDYQWMSRALELARRGRYTTAPNPCVGAVLVKAGVVVGEGWHQRAGE----PHAEVYAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + YVTLEPC CA A+ A + R+ +P G Sbjct: 60 HAAG-----DNARGATAYVTLEPCSHHGRTPPCAEALIKAGVTRVVAAMVDPNPQVGGRG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + A G+ + + FFK R Sbjct: 115 LRMLSEAGIKTDF----GLLASEAEALNPGFFKRMR 146 >gi|309389474|gb|ADO77354.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Halanaerobium praevalens DSM 2228] Length = 379 Score = 106 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A A + P VGAV V N +II ++ + HAE+ A+ Sbjct: 7 SDQKYMDRALKLAALAVGKTSPNPLVGAVIVKNGEIIGEGYHQKYGAQ----HAEVNALA 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 +L+V LEPC C AI + ++R+ +P G Sbjct: 63 KAG-----FKAEGAELFVNLEPCSHFGKTPPCTQAIIASGLKRVVVALVDPNPQVAGRGI 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + A EI G+ +++++ + F K Sbjct: 118 KQLRKAGI--KVEI--GLLAAKAKKLNEIFLK 145 >gi|229086682|ref|ZP_04218850.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock3-44] gi|228696629|gb|EEL49446.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock3-44] Length = 379 Score = 106 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ AL+ A+ + + P VGAV V + I+ + + HAE+ AI Sbjct: 11 TDQEYMNIALQLAESTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHAIH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + R++R+ + +G Sbjct: 67 MAGDKAY-----GSTVYVTLEPCSHFGKTPPCCDLLIEKRVKRVVIATLDCNPLVSGSGA 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A + G+ E+ + + + FF Sbjct: 122 RRLQEAG----ISVTTGVLEEEATTLNRYFF 148 >gi|320538258|ref|ZP_08038144.1| riboflavin biosynthesis protein RibD [Treponema phagedenis F0421] gi|320144885|gb|EFW36615.1| riboflavin biosynthesis protein RibD [Treponema phagedenis F0421] Length = 362 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 40/146 (27%), Positives = 59/146 (40%), Gaps = 21/146 (14%) Query: 8 MSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL+ A+ A + P VGAV V N KII + HAE A+R Sbjct: 1 MRTALQFAKKGAGWTSPNPMVGAVIVKNGKIIGSGFHERYGE----PHAERNALRA---- 52 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E LYVTLEPC C A+ + I R+ G+++P G + Sbjct: 53 -CTETPAGATLYVTLEPCCHHGKQPPCVDAVLESGITRVVIGSADPNPLVGGKGVRRLKE 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145 + E+ I ++ ++ + FF Sbjct: 112 SG----IEVSENILKEECDRLNEVFF 133 >gi|238795566|ref|ZP_04639081.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia mollaretii ATCC 43969] gi|238720685|gb|EEQ12486.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia mollaretii ATCC 43969] Length = 369 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 54/157 (34%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ +M+ A E A+ P VG V V + +I+ + HAE+ A Sbjct: 1 MQPDEFYMARAFELARMGCFTTPPNPNVGCVLVRDGEIVGEGYHLRAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM YVTLEPC CA A+ A + R+ +P Sbjct: 57 LRMAGEKAH-----GATAYVTLEPCSHHGRTPPCADALVAAGVIRVVAAMQDPNPQVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A + G+ + + F K R Sbjct: 112 GLYKLKQAG----IAVDHGLMLAEAEAVNLGFLKRMR 144 >gi|330943560|gb|EGH45897.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. pisi str. 1704B] Length = 245 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ VG V V +I+ + HAE+ A+R Sbjct: 9 DVHYMARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGE----PHAEVHALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P G Sbjct: 65 AGELA-----RGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGL- 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + + G+ E +R + + F K Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147 >gi|330903491|gb|EGH34063.1| cytosine deaminase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 125 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 12/126 (9%) Query: 24 IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 +P+G+V KII R NR + T H E+ A+ R + + + LY TL PC Sbjct: 1 MPIGSVIGHGGKIIGRGHNRRVQEGSATKHGEMDALENAGRQPAS-VYRDSVLYTTLSPC 59 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ-RSRQIIQ 142 MC+ AI L IR++ G + G E + + + +++ Sbjct: 60 AMCSGAILLYGIRKVIIGENESFMGEEE----LLRSRG------VQIDVLDNPECTHMMK 109 Query: 143 DFFKER 148 DF + Sbjct: 110 DFIASK 115 >gi|212638856|ref|YP_002315376.1| riboflavin-specific pyrimidine reductase/deaminase [Anoxybacillus flavithermus WK1] gi|212560336|gb|ACJ33391.1| Riboflavin-specific pyrimidine reductase/deaminase [Anoxybacillus flavithermus WK1] Length = 358 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 62/150 (41%), Gaps = 21/150 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL+ AQ+A + P VGAV V + +I+ + HAE+ A+RM Sbjct: 2 DEQYMRFALQLAQSARGQTSPNPLVGAVVVKHGEIVGFGAHLKAGE----PHAEVHALRM 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +YVTLEPC CA + +++R+ ++P G + Sbjct: 58 AGEKA-----EGATVYVTLEPCSHYGRTPPCADLLIEKKVKRVVVATTDPNPLVAGKGIE 112 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A ++ G+ ++ + + + FF Sbjct: 113 KLKRAG----IDVTVGVLKEEADALNEMFF 138 >gi|332687244|ref|YP_004457018.1| cytosine deaminase [Melissococcus plutonius ATCC 35311] gi|332371253|dbj|BAK22209.1| cytosine deaminase [Melissococcus plutonius ATCC 35311] Length = 164 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 1/106 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 K ++ +E ++ A P GA+ V + I+ N T HAE Sbjct: 8 KDHLYYLKRCIEISKQAKKNGNTPFGALLVDDAGNILFEQENIEITEHICTGHAETTLAA 67 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 + S++ L LY T EPC MC I I + +G + + Sbjct: 68 RASKKYSKDFLWGCTLYTTAEPCAMCTGTIYWGNIGTIVFGMTERR 113 >gi|317504450|ref|ZP_07962429.1| riboflavin biosynthesis protein RibD [Prevotella salivae DSM 15606] gi|315664438|gb|EFV04126.1| riboflavin biosynthesis protein RibD [Prevotella salivae DSM 15606] Length = 318 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 56/151 (37%), Gaps = 19/151 (12%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M L+ A+N VGAV V N+II + + HAE+ A Sbjct: 2 EHEYYMKRCLQLAENGRQNAKPNPMVGAVIVARNRIIGEGYHVRFGEE----HAEVNAF- 56 Query: 61 MGCRILSQE-ILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 E +L E +YV+LEPC CA I I+R G +P G Sbjct: 57 -ASVKPEDEMLLNEATIYVSLEPCSHYGKTPPCADLIISKGIKRCVCGCVDPFAKVQGRG 115 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 Q A E+ G+ E+ + F Sbjct: 116 IQRMRDAG----IEVIVGVMEKECLALNHRF 142 >gi|73666745|ref|YP_302761.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Ehrlichia canis str. Jake] gi|72393886|gb|AAZ68163.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Ehrlichia canis str. Jake] Length = 361 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 60/155 (38%), Gaps = 25/155 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M FMS AL A+ + P VG + V I+ R + HAE+ Sbjct: 2 MHDDKKFMSLALRIARRGL--GNVFPNPAVGCIVVNRGIIVGRGWTQVGGR----PHAEV 55 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 +A+ + +YVTLEPC+ CA + A I+R+ A +P Sbjct: 56 VALNNAG-----YLAKGATVYVTLEPCSHYGKTGPCALKLIDAGIKRMVIAARDPDVRVS 110 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 NG + A ++ + + ++++ FF Sbjct: 111 GNGIKLLRDAN----IDVKCDLMYKEAQELNVGFF 141 >gi|229180391|ref|ZP_04307734.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus 172560W] gi|228603138|gb|EEK60616.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus 172560W] Length = 379 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL A+ + + P VGAV V + I+ + + HAE+ A++ Sbjct: 11 TDQEYMRIALLLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + + +YVTLEPC C + ++R+ + NG Sbjct: 67 MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 155 >gi|2493562|sp|P70814|RIBD_BACAM RecName: Full=Riboflavin biosynthesis protein RibD; Includes: RecName: Full=Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase; Includes: RecName: Full=5-amino-6-(5-phosphoribosylamino)uracil reductase; AltName: Full=HTP reductase gi|1592688|emb|CAA65189.1| deaminase [Bacillus amyloliquefaciens] Length = 371 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 21/148 (14%) Query: 5 NVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ A+E A+ + + P VGAV V +I+ + AHAE+ AI M Sbjct: 3 EYYMNTAIELARRGEGQTQPNPLVGAVVVKKRQIVGMGAHLQYGE----AHAEVHAINMA 58 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + DLYVTLEPC CA I + I+R++ +P G Sbjct: 59 GSLA-----KGADLYVTLEPCSHYGKTPPCAELIMKSGIKRVFIAVEDPNPLVAGKGITM 113 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ Q++ ++ + F Sbjct: 114 LEEAG----IEVKTGLLRQQAEELNKMF 137 >gi|227364534|ref|ZP_03848595.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Lactobacillus reuteri MM2-3] gi|325682351|ref|ZP_08161868.1| riboflavin specific deaminase [Lactobacillus reuteri MM4-1A] gi|227070371|gb|EEI08733.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Lactobacillus reuteri MM2-3] gi|324978190|gb|EGC15140.1| riboflavin specific deaminase [Lactobacillus reuteri MM4-1A] Length = 355 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 22/153 (14%) Query: 3 KGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM A+ EA A + P VGAV V N ++++R HAE AI Sbjct: 5 EDAYFMQMAIAEAAKAGNETWKNPRVGAVVVKNGQVLARGHTHEYGGI----HAERDAI- 59 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 L+ + LYVTLEPC C+ AI A IRR+ ++P G Sbjct: 60 ---GKLTPKQGQGATLYVTLEPCNHYGKQPPCSQAIIDAGIRRVVIAETDPHKLVTGKGI 116 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQ--DFF 145 + G+ ++ ++ + DFF Sbjct: 117 ATLQQQN----IIVKTGVLKEAAQALNPYYDFF 145 >gi|323178323|gb|EFZ63901.1| riboflavin biosynthesis protein RibD [Escherichia coli 1180] Length = 361 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+RM Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALRMAGEK 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC C A+ A + R+ +P G Sbjct: 57 A-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQ 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 112 AG----IDVSHGLMMSEAEQLNKGFLKRMR 137 >gi|26522745|dbj|BAC44849.1| pyrimidine deaminase/pyrimidine reductase [Photobacterium phosphoreum] Length = 388 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 58/153 (37%), Gaps = 21/153 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MS A+ A++ P VG V V + I+ + + HAE+ A+R Sbjct: 4 TDQQMMSRAIALAKHGCYTTAPNPNVGCVIVNDGDIVGEGYH--YQAGQP--HAEVFALR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 Q+ +YVTLEPC CA A+ A++ R+ +P G Sbjct: 60 QA-----QQRAQGATVYVTLEPCSHYGRTPPCAEALINAKVARVVCAMVDPNPAVAGRGI 114 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ +++ + F K+ Sbjct: 115 ALLRAAG----IEVDVGVLASQAQALNPGFIKQ 143 >gi|328948002|ref|YP_004365339.1| riboflavin biosynthesis protein RibD [Treponema succinifaciens DSM 2489] gi|328448326|gb|AEB14042.1| riboflavin biosynthesis protein RibD [Treponema succinifaciens DSM 2489] Length = 390 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 58/150 (38%), Gaps = 22/150 (14%) Query: 6 VFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +FM A+E A+ ++ P VGAV + KII+ + HAE A++ Sbjct: 17 IFMQRAIELAKRGG--GKVHPNPLVGAVIEKDGKIIAEGFHHEYGNL----HAERDALKN 70 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + +LYVTLEPC C AI A I+ + G+ +P G Sbjct: 71 AAEKNACVR--GANLYVTLEPCCHTGKQPPCTQAIIDAGIKNVVIGSRDPNSLVNGKGVA 128 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + +I+ + + + FF Sbjct: 129 QLE----NAGIKIFRDFMKAECDSLNEIFF 154 >gi|326941884|gb|AEA17780.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus thuringiensis serovar chinensis CT-43] Length = 370 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL A+ + + P VGAV V + I+ + + HAE+ A++ Sbjct: 2 TDQEYMRIALLLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + + +YVTLEPC C + ++R+ + NG Sbjct: 58 MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 113 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 146 >gi|257899304|ref|ZP_05678957.1| riboflavin specific deaminase [Enterococcus faecium Com15] gi|257837216|gb|EEV62290.1| riboflavin specific deaminase [Enterococcus faecium Com15] Length = 364 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 41/147 (27%), Positives = 60/147 (40%), Gaps = 23/147 (15%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 FM A+ EA+ + P VGA V K+IS + + +HAE+ AI Sbjct: 9 HQSFMLAAIAEAKKG--KGNTFTNPLVGAAIVKEGKLISLGAHLHYGE----SHAEVNAI 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + S E L LYVTLEPC C AI + I + G +P G Sbjct: 63 QNCS---SPEELFNSTLYVTLEPCNHQGKQPPCTQAIVQSGITTVVIGQLDPNPLVAGKG 119 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQI 140 +F H ++ G+ E++ R + Sbjct: 120 REFLQK----HGIKVIVGVEEEKCRAL 142 >gi|220912199|ref|YP_002487508.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6] gi|219859077|gb|ACL39419.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6] Length = 161 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 46/94 (48%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 ++ A+ A + R P GAV V + + NR D TAHAE++AIR Sbjct: 13 YLQQAVGLATDNVDRGGGPFGAVVVTADGRVFEGVNRVTLDNDPTAHAEVVAIRAAAAGT 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + L LY + EPC +C A+ ARI R+Y+ Sbjct: 73 ANFNLQGAVLYASCEPCPLCLASALWARIDRVYF 106 >gi|49088842|gb|AAT51612.1| PA4056 [synthetic construct] Length = 374 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++M+ ALE A+ + VG V V + +++ + HAE+ A+R Sbjct: 5 DPLYMARALELARQGLYSTQPNPRVGCVLVKDGQVVGEGWHVRAGE----PHAEVHALRQ 60 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ +P G Sbjct: 61 AG-----ENARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLL 115 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E +R++ F K Sbjct: 116 RLMQAG----IAVQSGVLEAEARELNIGFIKR 143 >gi|330953126|gb|EGH53386.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae Cit 7] Length = 378 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ VG V V +I+ + HAE+ A+R Sbjct: 9 DVHYMARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHVRAGE----PHAEVHALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P G Sbjct: 65 AGELA-----RGATAYVTLEPCSHQGRTPPCADALIEAGVTRVVAAMQDPNPEVSGRGL- 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + + G+ E +R + + F K Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147 >gi|193215778|ref|YP_001996977.1| riboflavin biosynthesis protein RibD [Chloroherpeton thalassium ATCC 35110] gi|193089255|gb|ACF14530.1| riboflavin biosynthesis protein RibD [Chloroherpeton thalassium ATCC 35110] Length = 368 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 60/153 (39%), Gaps = 23/153 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 + ++ L+ A+ A + P VG+V V N KII + HAE+ Sbjct: 6 SEDEFYIDRCLKLAKKGA--GFVSPNPLVGSVIVHNGKIIGEGFHEVYGG----PHAEVN 59 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AI + +L E LYV LEPC CA I +I R+ G +P Sbjct: 60 AI---GSVAQPILLQESTLYVNLEPCAHFGKTPPCADLIIRHKIPRVVIGCLDPFEHVSG 116 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ E + ++ + F Sbjct: 117 KGAEKLRHAG----VEVKVGVLESEALRLNEAF 145 >gi|329733229|gb|EGG69566.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus 21193] Length = 347 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 24/152 (15%) Query: 5 NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 2 SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 Q+ +Y+TLEPC C I +I ++ Y + N Sbjct: 58 -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKITKVVYATKD-------NSLDT 105 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + T + ++R+ Q+ QDFFK + Sbjct: 106 HGDETLRAQGIEVECVDDERALQLYQDFFKAK 137 >gi|307137057|ref|ZP_07496413.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli H736] Length = 361 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+RM Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALRMAGEK 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC C A+ A + R+ +P G Sbjct: 57 A-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQ 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 112 AG----IDVSHGLMMSEAEQLNKGFLKRMR 137 >gi|253732422|ref|ZP_04866587.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253723812|gb|EES92541.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 357 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 24/152 (15%) Query: 5 NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM A++ A + + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 12 SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 67 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 Q+ +Y+TLEPC C I +I ++ Y + N Sbjct: 68 -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKITKVVYATKD-------NSLDT 115 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + T + ++R+ Q+ QDFFK + Sbjct: 116 HGDETLRAQGIEVECVDDERALQLYQDFFKAK 147 >gi|332992366|gb|AEF02421.1| riboflavin biosynthesis protein RibD [Alteromonas sp. SN2] Length = 404 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 59/153 (38%), Gaps = 22/153 (14%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIR 60 +M+ A+ AQ + P VG V V NN I + + ++ T HAEI A+R Sbjct: 38 DYYWMAKAIRLAQKGQFTTSPNPRVGCVIVNNNNDSIGQGFH----VQAGTPHAEIHALR 93 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ A++ R+ ++P NG Sbjct: 94 EAGKKA-----KGATAYVTLEPCSHYGRTPPCAEALIKAQVSRVVIAMTDPNPNVSGNGI 148 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + A E+ I S + F K Sbjct: 149 RMLQDAG----IEVSSDIMSAESAALNPGFIKR 177 >gi|228941263|ref|ZP_04103816.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974195|ref|ZP_04134765.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980786|ref|ZP_04141091.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis Bt407] gi|228778955|gb|EEM27217.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis Bt407] gi|228785535|gb|EEM33544.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818422|gb|EEM64494.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 379 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL A+ + + P VGAV V + I+ + + HAE+ A++ Sbjct: 11 TDQEYMRIALLLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + + +YVTLEPC C + ++R+ + NG Sbjct: 67 MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 155 >gi|218246081|ref|YP_002371452.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8801] gi|218166559|gb|ACK65296.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8801] Length = 360 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 58/149 (38%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M L+ A+ A + P VG+V V N +I+ + HAEI A+R Sbjct: 7 DQQMMQRCLQLARQALGQTSPNPLVGSVIVQNGEIVGEGFHPKAGE----PHAEIFALRQ 62 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 QE +YV+LEPC C A+ A + ++ G +P G + Sbjct: 63 A-----QERAKGATVYVSLEPCNHYGRTPPCTDALIAAGVSKVVVGMVDPNPLVSGKGVE 117 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + E+ G+ E RQ+ + F Sbjct: 118 KLQESG----IEVVVGVEESACRQLNEAF 142 >gi|297517703|ref|ZP_06936089.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli OP50] Length = 361 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+RM Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALRMAGEK 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC C A+ A + R+ +P G Sbjct: 57 A-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQ 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 112 AG----IDVSHGLMMSEAEQLNKGFLKRMR 137 >gi|15602614|ref|NP_245686.1| hypothetical protein PM0749 [Pasteurella multocida subsp. multocida str. Pm70] gi|12721046|gb|AAK02833.1| RibD [Pasteurella multocida subsp. multocida str. Pm70] Length = 376 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 59/155 (38%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + V+M ALE A+ P VG V V + I+ R + AHAE++A+R Sbjct: 7 QDVVYMQMALELAEKGQFTTTPNPSVGCVLVKDGIIVGRGFHVKAGE----AHAEVMALR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E YVTLEPC CA + A + ++ +P G Sbjct: 63 EAG-----ENARGATAYVTLEPCSHFGRTPPCAQGLIDAGVVKVVSAMCDPNPQVAGRGL 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + A + G+ +++ + + F K R Sbjct: 118 SMLSDAGIESAV----GLLAEKAEWLNRGFLKRMR 148 >gi|119715379|ref|YP_922344.1| guanine deaminase [Nocardioides sp. JS614] gi|119536040|gb|ABL80657.1| Guanine deaminase [Nocardioides sp. JS614] Length = 158 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 4/133 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +++ A+ AQ P GAV V + NR D TAHAE+ AIR Sbjct: 5 TDEQWLARAVRLAQENVAAGGGPFGAVVVGAGVRVGEGQNRVTRDLDPTAHAEVTAIRQA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--NPKGGGIENG--TQFYT 118 C L L LY + EPC +C A AR+ R+ Y A + GG ++ Sbjct: 65 CAALGDFSLTGCVLYASCEPCPLCLTASLWARLDRVVYAADRHDAARGGFDDREFYDLLG 124 Query: 119 LATCHHSPEIYPG 131 + G Sbjct: 125 RDRATWPTRVEQG 137 >gi|46201728|ref|ZP_00208227.1| COG1985: Pyrimidine reductase, riboflavin biosynthesis [Magnetospirillum magnetotacticum MS-1] Length = 358 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 53/148 (35%), Gaps = 25/148 (16%) Query: 8 MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M AL A+ + P VG V V + +++ R + HAE A+ M Sbjct: 1 MRAALALARRGL--GTVWPNPAVGCVIVRDGRVVGRGWTQPGGR----PHAETEALAMAG 54 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 R +YVTLEPC CA A+ A + R+ +P G Sbjct: 55 RAA-----NGATVYVTLEPCAHHGKTAPCADALIAAGVSRVVVAVQDPDSRVAGKGIDRL 109 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 +A + G+ + ++ FF Sbjct: 110 RVAGIP----VTEGVLHAEASELNAGFF 133 >gi|113868680|ref|YP_727169.1| cytosine/adenosine deaminase [Ralstonia eutropha H16] gi|113527456|emb|CAJ93801.1| Cytosine/adenosine deaminase [Ralstonia eutropha H16] Length = 169 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 58/154 (37%), Gaps = 11/154 (7%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRE-LKDVTAHAEILAIRM 61 + ++ + + R P A+ II+ AGN + D T HAE++A Sbjct: 16 DLELLRQSIALSDASRARGRHPFAALVADQAGNIIASAGNNSMPPEGDPTQHAELVAAAQ 75 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE---------N 112 R L E L + LY + EPC MCA AI I R+ Y S K G+ + Sbjct: 76 AARALPPEQLADCTLYTSAEPCCMCAGAIYWTGIGRVVYALSEHKLLGLTGDHPENPTLS 135 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A ++ + E + F+K Sbjct: 136 LPCREVFARGQRQVDVVGPVLEDEAAAPHAGFWK 169 >gi|313902290|ref|ZP_07835695.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase ;5-amino-6-(5-phosphoribosylamino)uracil reductase [Thermaerobacter subterraneus DSM 13965] gi|313467441|gb|EFR62950.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase ;5-amino-6-(5-phosphoribosylamino)uracil reductase [Thermaerobacter subterraneus DSM 13965] Length = 443 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 39/152 (25%), Positives = 59/152 (38%), Gaps = 23/152 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + FM AL+ A A R P VGAV V + ++ +R HAE+ A Sbjct: 38 EADRHFMRRALDLAARAGGRT-HPNPMVGAVIVRDGVVVGEGYHRRAGE----PHAEVEA 92 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R ++ LYVTLEPC C AI A +RR+ +P Sbjct: 93 LRSA-----RDQARGATLYVTLEPCCHHGRTPPCTEAILAAGLRRVVVAMVDPDPRVAGR 147 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A E+ G+ R+ ++ + + Sbjct: 148 GLSVLAQAG----VEVAVGVEADRALRLNEAY 175 >gi|169634649|ref|YP_001708385.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Acinetobacter baumannii SDF] gi|169153441|emb|CAP02583.1| bifunctional protein [Includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP reductase) ] [Acinetobacter baumannii] Length = 361 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 61/155 (39%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +K+ +M A+E A+ P VG V V +N++I + HAE+ A Sbjct: 4 LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQVIGEGFHPRAGQ----PHAEVFA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R YVTLEPC CA A+ A+++++ +P Sbjct: 60 LRQAGEQAQ-----GATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGK 114 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G Q + E+ GI E + Q+ Q F K Sbjct: 115 GVQILK----NAGIEVEIGICEDLAAQLNQGFLKA 145 >gi|261341007|ref|ZP_05968865.1| riboflavin biosynthesis protein RibD [Enterobacter cancerogenus ATCC 35316] gi|288316872|gb|EFC55810.1| riboflavin biosynthesis protein RibD [Enterobacter cancerogenus ATCC 35316] Length = 367 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++M+ A++ AQ + P VG V V + +I+ + HAE+ A+R Sbjct: 2 QDEIYMARAMKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----RGATAYVTLEPCSHHGRTPPCCEALIAAGVSRVVASMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 ++ G+ Q + + + F K R Sbjct: 113 YRLQQEG----IDVSHGLMMQDAEALNKGFLKRMR 143 >gi|328956808|ref|YP_004374194.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Carnobacterium sp. 17-4] gi|328673132|gb|AEB29178.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Carnobacterium sp. 17-4] Length = 355 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 58/146 (39%), Gaps = 23/146 (15%) Query: 10 CALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 AL+ A+ P VGAV V ++I + ++ HAE+ AI + Sbjct: 1 MALDLARKG-KGWTTPNPLVGAVIVKGGRVIGQGYHQKYGQ----PHAEVNAIVSAKK-- 53 Query: 67 SQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + LYVTLEPC C+ + I+R+ G +P G + Sbjct: 54 ---DVTGATLYVTLEPCSHFGKTPPCSDLLIDKNIKRVVVGTLDPNPLVAGKGIERLRSN 110 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146 E+ G+ E+ S+++ + F K Sbjct: 111 G----IEVVTGVLEEESQKLNEIFIK 132 >gi|320540315|ref|ZP_08039967.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Serratia symbiotica str. Tucson] gi|320029635|gb|EFW11662.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Serratia symbiotica str. Tucson] Length = 371 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 54/157 (34%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ +M+ A + A+ P VG V V + +I+ + HAE+ A Sbjct: 1 MQSDVFYMARAFKLARLGRFTTAPNPNVGCVIVRDGEIVGEGYHLRAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + M YVTLEPC CA A+ A + R+ +P Sbjct: 57 LCMAGEKA-----RGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVTAMQDPNPQVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A E+ G+ + + F K R Sbjct: 112 GLYQLQQAG----IEVCHGLMLAEAEAVNPGFLKRMR 144 >gi|271965977|ref|YP_003340173.1| cytosine/adenosine deaminase [Streptosporangium roseum DSM 43021] gi|270509152|gb|ACZ87430.1| cytosine/adenosine deaminase [Streptosporangium roseum DSM 43021] Length = 141 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 1/102 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ A+E A A + P G++ + +I+ N D+TAH E+ R Sbjct: 4 DDERFLRRAIELAGTARAAGDPPFGSLLTGPDGSVIAEDRNTVLTDSDITAHPELKLARW 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 R L E +Y + +PC MCA AI + + R+ + S Sbjct: 64 AARELDPETAAATTMYTSCQPCGMCAGAIERSGLGRVVFALS 105 >gi|332976011|gb|EGK12882.1| riboflavin biosynthesis protein RibD [Psychrobacter sp. 1501(2011)] Length = 374 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ A+E A+ R VG V V + II + K HAE+ A+R Sbjct: 35 EDYYYMNLAIEAAKKGLYTTRPNPAVGCVLVKDGLIIGTGFH----PKAGQPHAEVFALR 90 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + ++ YVTLEPC CA A+ A++ R+ +P G Sbjct: 91 NATQSVAA-----ATAYVTLEPCSHTGKTPPCAEALIKAQVSRVVIAGLDPNPKVAGRGV 145 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + A ++ G+ +++ Q+ F K R Sbjct: 146 RLLLDAG----IKVSVGVCTEQAEQLNLGFLKSMR 176 >gi|196047192|ref|ZP_03114408.1| riboflavin biosynthesis protein RibD [Bacillus cereus 03BB108] gi|225866095|ref|YP_002751473.1| riboflavin biosynthesis protein RibD [Bacillus cereus 03BB102] gi|196021941|gb|EDX60632.1| riboflavin biosynthesis protein RibD [Bacillus cereus 03BB108] gi|225786227|gb|ACO26444.1| riboflavin biosynthesis protein RibD [Bacillus cereus 03BB102] Length = 370 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 58/158 (36%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A+ Sbjct: 2 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + I R+ + NG Sbjct: 58 MAGDKA-----KGATVYVTLEPCSHFGKTPPCCDLLIKKGITRVVIATLDCNPLVSGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 113 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 146 >gi|163750014|ref|ZP_02157258.1| riboflavin biosynthesis protein RibD [Shewanella benthica KT99] gi|161330288|gb|EDQ01269.1| riboflavin biosynthesis protein RibD [Shewanella benthica KT99] Length = 380 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 56/154 (36%), Gaps = 17/154 (11%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FMS A++ A+ P VG V L+++I+ + HAE+ A+ Sbjct: 5 EDTEFMSRAIKLARRGLYTTRPNPCVGCVITLDDQILGEGFHIRAGG----PHAEVHALA 60 Query: 61 MGC-RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 M R L YVTLEPC CA A+ I R+ +P G Sbjct: 61 MATQRADGLADLKGATAYVTLEPCSHYGRTPPCAEALIKHGISRVVVAVEDPNPRVSGRG 120 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A ++ G+ + QI F K Sbjct: 121 INMLKDAG----IKVDVGLLGDEAAQINPGFMKR 150 >gi|15599251|ref|NP_252745.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa PAO1] gi|9950253|gb|AAG07443.1|AE004822_3 riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa PAO1] Length = 373 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++M+ ALE A+ + VG V V + +++ + HAE+ A+R Sbjct: 5 DPLYMARALELARQGLYSTQPNPRVGCVLVKDGQVVGEGWHVRAGE----PHAEVHALRQ 60 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ +P G Sbjct: 61 AG-----ENARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLL 115 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E +R++ F K Sbjct: 116 RLMQAG----IAVQSGVLEAEARELNIGFIKR 143 >gi|330969741|gb|EGH69807.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. aceris str. M302273PT] Length = 378 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ VG V V +I+ + HAE+ A+R Sbjct: 9 DVHYMARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGE----PHAEVHALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P G Sbjct: 65 AGELA-----RGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGL- 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + + G+ E +R + + F K Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147 >gi|330888055|gb|EGH20716.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. mori str. 301020] Length = 276 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 57/152 (37%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+N VG V V + +I+ + HAE+ A+R Sbjct: 9 DVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGE----PHAEVHALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E+ YVTLEPC CA A+ A + R+ +P G Sbjct: 65 A-----SELARGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGL- 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + + G+ E +R + + F K Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147 >gi|257059130|ref|YP_003137018.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8802] gi|256589296|gb|ACV00183.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8802] Length = 360 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 58/149 (38%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M L+ A+ A + P VG+V V N +I+ + HAEI A+R Sbjct: 7 DQQMMQRCLQLARQALGQTSPNPLVGSVIVQNGEIVGEGFHPKAGE----PHAEIFALRQ 62 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 QE +YV+LEPC C A+ A + ++ G +P G + Sbjct: 63 A-----QERAKGATVYVSLEPCNHYGRTPPCTDALIAAGVSKVVVGMVDPNPLVSGKGVE 117 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + E+ G+ E RQ+ + F Sbjct: 118 KLQESG----IEVVVGVEESACRQLNEAF 142 >gi|260662243|ref|ZP_05863139.1| riboflavin biosynthesis protein RibD [Lactobacillus fermentum 28-3-CHN] gi|260553626|gb|EEX26518.1| riboflavin biosynthesis protein RibD [Lactobacillus fermentum 28-3-CHN] Length = 352 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 59/153 (38%), Gaps = 20/153 (13%) Query: 1 MKKGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M FM AL EA + P VGAV V + ++++ + AHAE A Sbjct: 1 MSSDEQFMQLALAEAAKGGSATWKNPQVGAVIVKDGQLLATGYHHQYGQ----AHAERDA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I LS E L +YVTLEPC C+ + + R+ +P Sbjct: 57 I----SKLSNEQLAGATIYVTLEPCFHYGKQPPCSQLLIDSHFARVVVATIDPHQVVGGK 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G A ++ G+ + ++ + + +F Sbjct: 113 GIAQLKAAG----IDVEVGLLKDQAEALNRHYF 141 >gi|330812014|ref|YP_004356476.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; riboflavin biosynthesis protein RibD [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380122|gb|AEA71472.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; riboflavin biosynthesis protein RibD [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 377 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 57/152 (37%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ + P VG V V + +I+ + HAE+ A+R Sbjct: 11 DAHYMARALELARRGHYTTHPNPRVGCVIVRDGQIVGEGWHIRAGE----PHAEVHALRA 66 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ +P G Q Sbjct: 67 AG-----EQARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQ 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A G+ E +R++ + F K Sbjct: 122 RLAQAG----IATESGVLEGEARKLNEGFLKR 149 >gi|229146686|ref|ZP_04275053.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus BDRD-ST24] gi|228636856|gb|EEK93319.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus BDRD-ST24] Length = 379 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + ++R+ + NG Sbjct: 67 MAGEKA-----KGATVYVTLEPCSHFGKTPPCCDLLLKKGVKRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 RRLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 155 >gi|260588249|ref|ZP_05854162.1| riboflavin biosynthesis protein RibD [Blautia hansenii DSM 20583] gi|260541387|gb|EEX21956.1| riboflavin biosynthesis protein RibD [Blautia hansenii DSM 20583] Length = 362 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 38/146 (26%), Positives = 54/146 (36%), Gaps = 21/146 (14%) Query: 8 MSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL+ A+ VGAV V +II + + AHAE A+ C Sbjct: 1 MKIALQLAKKGCGFTSPNPMVGAVIVKEGRIIGQGWHEKYGE----AHAERNAL-AAC-- 53 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E +YVTLEPC C AI A I R+ G+ +P G Q Sbjct: 54 --TENPKGATMYVTLEPCCHYGKQPPCINAIMEAGIERVVIGSGDPNPLVSGKGIQILKK 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145 + I ++ ++ + FF Sbjct: 112 QGIL----VTEHILQEDCERLNEVFF 133 >gi|118479310|ref|YP_896461.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus thuringiensis str. Al Hakam] gi|229186356|ref|ZP_04313521.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus BGSC 6E1] gi|118418535|gb|ABK86954.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus thuringiensis str. Al Hakam] gi|228597150|gb|EEK54805.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus BGSC 6E1] Length = 379 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 58/158 (36%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + I R+ + NG Sbjct: 67 MAGDKA-----KGATVYVTLEPCSHFGKTPPCCDLLIKKGITRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 155 >gi|163941852|ref|YP_001646736.1| riboflavin biosynthesis protein RibD [Bacillus weihenstephanensis KBAB4] gi|163864049|gb|ABY45108.1| riboflavin biosynthesis protein RibD [Bacillus weihenstephanensis KBAB4] Length = 370 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ AQ + + P VGAV V + KI+ + + HAE+ A+ Sbjct: 2 TDQEYMRIALQLAQGTSGQTSPNPMVGAVVVKDGKIVGMGAHMRAGEE----HAEVHALH 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M E + +YVTLEPC C + ++R+ + NG Sbjct: 58 MAG-----ERAKDATVYVTLEPCSHFGKTPPCCELLIEKGVQRVVIATLDCNPLVSGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + E+ G+ E + + + FF K +R Sbjct: 113 RRLEEVG----IEVTTGVLEAEATLLNRYFFHYMKTKR 146 >gi|225387920|ref|ZP_03757684.1| hypothetical protein CLOSTASPAR_01690 [Clostridium asparagiforme DSM 15981] gi|225045989|gb|EEG56235.1| hypothetical protein CLOSTASPAR_01690 [Clostridium asparagiforme DSM 15981] Length = 161 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 1/99 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + +E ++ + P GA+ I+ N K T HAE A ++ Sbjct: 10 LKRCVEISRQSRANGNTPFGALLADKEGNILLEQPNVEITEKKCTGHAETQAAERASQLY 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 S+E L + LY T EPC MCA AI A I R+ YG + Sbjct: 70 SREFLKDCTLYTTAEPCAMCAGAIYWAGIGRVVYGMTEK 108 >gi|150026064|ref|YP_001296890.1| riboflavin biosynthesis protein RibD [Flavobacterium psychrophilum JIP02/86] gi|149772605|emb|CAL44088.1| Riboflavin biosynthesis protein RibD [Flavobacterium psychrophilum JIP02/86] Length = 335 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 24/161 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MK ++ +E A+N +P VGAV V NKII HAE+ Sbjct: 1 MKIHEKYIKRCIELAKNGLPAA-MPNPSVGAVIVFENKIIGEGYTAAYGGN----HAEVN 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AI + ++++L + +YV+LEPC C I +I + G + Sbjct: 56 AI---LSVKNKDLLAKSTIYVSLEPCSHFGKTPPCCDLIIKYKIPNVVIGTVDSNSKVSG 112 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 G + A + + GI E R+ + FF +++R Sbjct: 113 QGIKKLIEAGAN----VIVGILEAECRESNKRFFTFHEKKR 149 >gi|157073959|ref|NP_001096831.1| tRNA-specific adenosine deaminase-like protein 3 [Rattus norvegicus] gi|81882326|sp|Q561R2|ADAT3_RAT RecName: Full=tRNA-specific adenosine deaminase-like protein 3; AltName: Full=tRNA-specific adenosine-34 deaminase subunit ADAT3 gi|62531223|gb|AAH93394.1| Adat3 protein [Rattus norvegicus] gi|149034525|gb|EDL89262.1| secretory carrier membrane protein 4, isoform CRA_e [Rattus norvegicus] Length = 349 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 40/153 (26%) Query: 26 VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRM----------------GC---- 63 VGAV V + +++ + E HA ++ I + C Sbjct: 195 VGAVVVDPASDHVLATGHDCCSEA-SPLLHAVMVCIDLVAQGQGRGSCDLRRHPACSFTQ 253 Query: 64 ------------RILSQEILP----EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 R L ++ LP DLYVT EPC MCA A+ ARI+R++YGA +P Sbjct: 254 ATATQSARAGSVRKLDEDSLPYVCTGYDLYVTREPCVMCAMALVHARIQRVFYGAPSPD- 312 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 G + + + +H +++ GI E + RQ+ Sbjct: 313 GALGTRFRVHARPDLNHRFQVFRGILEDQCRQL 345 >gi|302189350|ref|ZP_07266023.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. syringae 642] Length = 378 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ A+E A+ VG V V +I+ + HAE+ A+R Sbjct: 9 DVHYMARAIELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGE----PHAEVHALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P G Sbjct: 65 AGELA-----RGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGL- 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + + G+ E SR + + F K Sbjct: 119 ---LRLMNAGIGVQCGVLESESRALNKGFLKR 147 >gi|116669457|ref|YP_830390.1| cytosine deaminase [Arthrobacter sp. FB24] gi|116609566|gb|ABK02290.1| Cytosine deaminase [Arthrobacter sp. FB24] Length = 176 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 14/129 (10%) Query: 17 NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDL 76 + IP+GA N++I+ N + D AH E+ A+R R Q+ + L Sbjct: 35 QSLSEGGIPIGAALARGNELIASGHNERVQHGDPIAHGEMAALRAAGR---QKSYRDTTL 91 Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ- 135 Y TL PC MC I +I R+ G + G E E+ + + Sbjct: 92 YTTLAPCAMCTGTIIQFKIPRVVVGEARTFPGEFE----LLRSRG----VEVL--VLDDQ 141 Query: 136 RSRQIIQDF 144 R ++ F Sbjct: 142 RCVDMMLTF 150 >gi|317492964|ref|ZP_07951388.1| riboflavin biosynthesis protein RibD [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919086|gb|EFV40421.1| riboflavin biosynthesis protein RibD [Enterobacteriaceae bacterium 9_2_54FAA] Length = 373 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 55/154 (35%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ A E A+ P VG V VLN++I+ + HAE+ A+ M Sbjct: 8 DEFYMARAFELARRGRFTTTPNPNVGCVIVLNDEIVGEGYHLRAGE----PHAEVHALHM 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ A + R+ +P G Sbjct: 64 AGDKA-----RGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPNVAGRGLF 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + + + F K R Sbjct: 119 KLQQAG----IDVSHGLMMNEAEAVNRGFLKRMR 148 >gi|251792829|ref|YP_003007555.1| riboflavin biosynthesis protein RibD [Aggregatibacter aphrophilus NJ8700] gi|247534222|gb|ACS97468.1| riboflavin biosynthesis protein RibD [Aggregatibacter aphrophilus NJ8700] Length = 374 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 K FM AL+ A+ VG V V N +II + + HAE++A+R Sbjct: 8 KDAEFMQLALDLAKQGEFTATPNPAVGCVLVKNGQIIGKGFHAKAGE----PHAEVMALR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E YVTLEPC CA + A +R + +P G Sbjct: 64 EAG-----ENARGATAYVTLEPCAHYGRTPPCAKGLVDAGVRIVIAAMCDPNPLVAGKGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ ++ + ++ + F K R Sbjct: 119 GILADAGIESAV----GLLKENAEELNKGFLKRMR 149 >gi|284989444|ref|YP_003407998.1| cytosine deaminase [Geodermatophilus obscurus DSM 43160] gi|284062689|gb|ADB73627.1| Cytosine deaminase [Geodermatophilus obscurus DSM 43160] Length = 165 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 1/100 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ + A+E+A+ +P+GA V +++++ NR ++ H E I Sbjct: 17 ERDRFLLGLAVEQARIGWEEGGVPIGAALVDGDRVLAVGRNRRVQMASAIRHGETDCIER 76 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 R L + LY TL PC MCA L I R+ G Sbjct: 77 AGR-LPASVYRRSVLYTTLSPCLMCAGTALLYDIPRIVVG 115 >gi|116052093|ref|YP_789063.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa UCBPP-PA14] gi|115587314|gb|ABJ13329.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa UCBPP-PA14] Length = 373 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++M+ ALE A+ VG V V + +++ + HAE+ A+R Sbjct: 5 DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGE----PHAEVHALRQ 60 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ +P G Sbjct: 61 AG-----ENARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLL 115 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E +R++ F K Sbjct: 116 RLMQAG----IAVQSGVLEAEARELNIGFIKR 143 >gi|251811149|ref|ZP_04825622.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus epidermidis BCM-HMP0060] gi|282875812|ref|ZP_06284679.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis SK135] gi|251805369|gb|EES58026.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus epidermidis BCM-HMP0060] gi|281294837|gb|EFA87364.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis SK135] gi|329730651|gb|EGG67035.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis VCU144] gi|329737423|gb|EGG73677.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis VCU028] Length = 347 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 24/151 (15%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ A+ + + PVG+V V N +I+ + + K HAE+ AI M Sbjct: 4 FMDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAHLKKGDK----HAEVQAIEMAGL 59 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +YV+LEPC C I A I ++ Y + + G + Sbjct: 60 NTQ-----GATIYVSLEPCTHHGSTPPCVDKIIEAGISKVIYAVKDTTL--VSKGDEILR 112 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ +E + + +DFF +R Sbjct: 113 EAG----IEVEFQYNEN-AAALYRDFFTAKR 138 >gi|57867218|ref|YP_188900.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis RP62A] gi|57637876|gb|AAW54664.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis RP62A] Length = 347 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 24/151 (15%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ A+ + + PVG+V V N +I+ + + K HAE+ AI M Sbjct: 4 FMDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAHLKKGDK----HAEVQAIEMAGL 59 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +YV+LEPC C I A I ++ Y + + G + Sbjct: 60 NTQ-----GATIYVSLEPCTHHGSTPPCVDKIIEAGISKVIYAVKDTTL--VSKGDEILR 112 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ +E + + +DFF +R Sbjct: 113 EAG----IEVEFQYNEN-AAALYRDFFTAKR 138 >gi|196001961|ref|XP_002110848.1| hypothetical protein TRIADDRAFT_54182 [Trichoplax adhaerens] gi|190586799|gb|EDV26852.1| hypothetical protein TRIADDRAFT_54182 [Trichoplax adhaerens] Length = 283 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 27/157 (17%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRA--GNRNRELKDVTAHAEILAIRMGC 63 M A+ A + +GAV V NK++++A G + HA + I Sbjct: 129 MDIAIS---TALENSMFKIGAVMVDPESNKVLAKASDGRSRNVDSSLLKHAVMTCIDDIG 185 Query: 64 RIL--------------------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 ++ + DLYVT EPC MCA A+ +RI+R++Y Sbjct: 186 KMHVAVENTNNSSKLPNEESNNQRGYLCTGYDLYVTKEPCVMCAMALVHSRIKRVFYAVE 245 Query: 104 NPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 + + G + + + + +H E++ I R Q+ Sbjct: 246 DKEYGALGSRYKIHVHEGLNHHFEVFKNIYRDRCLQL 282 >gi|20139385|sp|P57533|RIBD1_BUCAI RecName: Full=Diaminohydroxyphosphoribosylamino-pyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase Length = 147 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 56/157 (35%), Gaps = 29/157 (18%) Query: 3 KGNVFMSCALEEAQNAALRNEI-----P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 +M A+E ++ E P VG V V NN I+ + HAEI Sbjct: 2 NDIFYMKRAIELSKL----GEFTTAPNPNVGCVIVKNNIIVGEGWHEQAGKN----HAEI 53 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+ M YVTLEPC C A+ + I R+ +P Sbjct: 54 NALIMAGEKAQ-----GGTAYVTLEPCNHFGKTPPCCNALIKSGINRVVISNIDPNPKIS 108 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 NG + H + G+ + S+Q + FFK Sbjct: 109 GNGILYLKK----HGICVKTGLLSKESKQYNKGFFKR 141 >gi|228987304|ref|ZP_04147425.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772533|gb|EEM20978.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 379 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + ++R+ + NG Sbjct: 67 MAGEKA-----KGATVYVTLEPCSHFGKTPPCCDLLLKKGVKRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 RRLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 155 >gi|21672710|ref|NP_660777.1| riboflavin biosynthesis protein RibD [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25091139|sp|Q8K9A4|RIBD1_BUCAP RecName: Full=Diaminohydroxyphosphoribosylamino-pyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase gi|21623353|gb|AAM67988.1| riboflavin biosynthesis protein RibD [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 147 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 36/159 (22%), Positives = 59/159 (37%), Gaps = 29/159 (18%) Query: 3 KGNVFMSCALEEAQNAALRNEI-----P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 K +M+ A++ ++ E P VG V V N KI+ ++ HAEI Sbjct: 2 KDRFYMTRAIKLSKL----GEFTTSPNPNVGCVIVQNKKIVGEGWHKKYGEN----HAEI 53 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+ M Y+TLEPC C AI + I+ + + +P Sbjct: 54 NALNMAGEKA-----KGSTAYITLEPCNHFGKTPPCCDAIIQSGIKNVIISSLDPNPKVS 108 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + + G+ + S++ + FFK R Sbjct: 109 GKGVLYLRKKG----ISVKIGLMSKESQKYNKGFFKRMR 143 >gi|47568170|ref|ZP_00238874.1| riboflavin biosynthesis protein RibD [Bacillus cereus G9241] gi|47555160|gb|EAL13507.1| riboflavin biosynthesis protein RibD [Bacillus cereus G9241] Length = 370 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A+ Sbjct: 2 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + ++R+ + NG Sbjct: 58 MAGEKA-----KGATVYVTLEPCSHFGKTPPCCDLLLKKGVKRVVIATLDCNPLVSGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 113 RRLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 146 >gi|107103570|ref|ZP_01367488.1| hypothetical protein PaerPA_01004640 [Pseudomonas aeruginosa PACS2] gi|218889663|ref|YP_002438527.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa LESB58] gi|218769886|emb|CAW25647.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa LESB58] Length = 373 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++M+ ALE A+ VG V V + +++ + HAE+ A+R Sbjct: 5 DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGE----PHAEVHALRQ 60 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ +P G Sbjct: 61 AG-----ENARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLL 115 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E +R++ F K Sbjct: 116 RLMQAG----IAVQSGVLEAEARELNIGFIKR 143 >gi|254242738|ref|ZP_04936060.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa 2192] gi|126196116|gb|EAZ60179.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa 2192] Length = 373 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++M+ ALE A+ VG V V + +++ + HAE+ A+R Sbjct: 5 DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGE----PHAEVHALRQ 60 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ +P G Sbjct: 61 AG-----ENARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLL 115 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E +R++ F K Sbjct: 116 RLMQAG----IAVQSGVLEAEARELNIGFIKR 143 >gi|282859870|ref|ZP_06268958.1| riboflavin biosynthesis protein RibD [Prevotella bivia JCVIHMP010] gi|282587273|gb|EFB92490.1| riboflavin biosynthesis protein RibD [Prevotella bivia JCVIHMP010] Length = 314 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 21/156 (13%) Query: 1 MKK---GNVFMSCALEEAQNA--ALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHA 54 M++ ++M L+ A N + VGAV V N +II + + HA Sbjct: 1 MERQDIDEMYMRRCLQLATNGKLLAKPNPMVGAVIVSNEGRIIGEGYHVRCGEE----HA 56 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108 E+ A R + +L + +YV+LEPC CA I ++R+ G +P Sbjct: 57 EVNAF-ASVRKEDESLLSDSTIYVSLEPCSHFGKTPPCANLIIKKGVKRVVCGCVDPFSK 115 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ G+ E + F Sbjct: 116 VQGRGIQRIREAG----IEVTVGVLEAECLVLNNRF 147 >gi|253687420|ref|YP_003016610.1| riboflavin biosynthesis protein RibD [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753998|gb|ACT12074.1| riboflavin biosynthesis protein RibD [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 378 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 55/155 (35%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++M+ ALE A+ P VG V V + I+ + HAE+ A+R Sbjct: 12 QDELYMARALELARRGRFTTAPNPNVGCVIVRDGDIVGEGYHFRAGE----PHAEVHALR 67 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M E YVTLEPC CA A+ A + R+ +P G Sbjct: 68 MAG-----ERARGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPQVAGRGL 122 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G + ++ F K R Sbjct: 123 HRLQQAG----IAVSHGFMMAEAEKVNVGFLKRMR 153 >gi|300784804|ref|YP_003765095.1| cytosine deaminase [Amycolatopsis mediterranei U32] gi|299794318|gb|ADJ44693.1| cytosine deaminase [Amycolatopsis mediterranei U32] Length = 152 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 15/143 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 ++ A EEA+ +P+GA + ++ R NR + D + HAE A R R Sbjct: 9 LAVAREEAELGKAEGGVPIGAALFDSTGTLLGRGHNRRVQDGDPSMHAETAAFRNAGR-- 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + + + TL PC C+ + I R+ G + GG + Sbjct: 67 -RPHYRDTIMVTTLSPCWYCSGLVRQFGIGRVVIGEAETFHGGHDWLAGL--------GV 117 Query: 127 EIYPGISEQR-SRQIIQDFFKER 148 EI + + ++ +F R Sbjct: 118 EIT--LLDDPGCTALMTEFIAAR 138 >gi|138895866|ref|YP_001126319.1| riboflavin biosynthesis protein RibD [Geobacillus thermodenitrificans NG80-2] gi|134267379|gb|ABO67574.1| Riboflavin biosynthesis protein RibD [Geobacillus thermodenitrificans NG80-2] Length = 359 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 21/146 (14%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL+ A+ + VGAV V + I+ + HAE+ AIRM Sbjct: 1 MRLALDVAKAGVGQTSPNPAVGAVVVNDGTIVGIGAHLKAGE----PHAEVHAIRMAGEK 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +YVTLEPC CA + A +RR+ ++P G Sbjct: 57 A-----RGATVYVTLEPCSHYGKTPPCADLLIEAGVRRVVVATTDPNPLVAGKGINKLRR 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145 A ++ GI ++ + ++ + FF Sbjct: 112 AG----IDVEVGILKEEADELNRMFF 133 >gi|68171296|ref|ZP_00544696.1| Riboflavin biosynthesis protein RibD [Ehrlichia chaffeensis str. Sapulpa] gi|88658608|ref|YP_506994.1| riboflavin biosynthesis protein RibD [Ehrlichia chaffeensis str. Arkansas] gi|67999277|gb|EAM85926.1| Riboflavin biosynthesis protein RibD [Ehrlichia chaffeensis str. Sapulpa] gi|88600065|gb|ABD45534.1| riboflavin biosynthesis protein RibD [Ehrlichia chaffeensis str. Arkansas] Length = 360 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 25/155 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 ++ FMS AL A+ + P VG + V + ++ R + HAE+ Sbjct: 2 IRYDKKFMSLALRIARRGL--GNVFPNPAVGCIVVNHGMVVGRGYTQVGGR----PHAEV 55 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 +A+ + +YVTLEPC+ CA + A ++R+ A +P Sbjct: 56 IALNNAGHLA-----KGSTVYVTLEPCSHYGQTGPCALKLIDAGVKRMVIAAKDPDVRVS 110 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 NG + + ++ G+ + +R++ FF Sbjct: 111 GNGIELLR----NAGIDVKCGVMYEEARELNIGFF 141 >gi|288926889|ref|ZP_06420789.1| riboflavin biosynthesis protein RibD [Prevotella buccae D17] gi|288336328|gb|EFC74709.1| riboflavin biosynthesis protein RibD [Prevotella buccae D17] Length = 286 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 57/151 (37%), Gaps = 18/151 (11%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 FM L+ A+N VGAV V + +II + HAE+ A Sbjct: 25 TDEKFMRRCLQLARNGRQNAKPNPMVGAVIVSPDGRIIGEGYHVRCGEG----HAEVNAF 80 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + +L E +YV+LEPC CA I +RR+ G +P G Sbjct: 81 -ASVRPEDEALLHESTIYVSLEPCSHFGKTPPCADLIVRKGVRRVVCGCIDPFAEVSGRG 139 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ EQ + + F Sbjct: 140 VERIRKAG----IEVTVGVLEQECLTLNRRF 166 >gi|333029739|ref|ZP_08457800.1| riboflavin biosynthesis protein RibD [Bacteroides coprosuis DSM 18011] gi|332740336|gb|EGJ70818.1| riboflavin biosynthesis protein RibD [Bacteroides coprosuis DSM 18011] Length = 348 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 64/161 (39%), Gaps = 25/161 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M K +M ++ A L P VGAV V II + ++ AHAE+ Sbjct: 1 MDK-EKYMKRCIQLASYGKLHA-APNPLVGAVIVHKGIIIGEGFH----IQSGKAHAEVN 54 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AI + Q +LPE ++V+LEPC C I +I + G +P Sbjct: 55 AINS---VKDQSLLPESTIFVSLEPCSHTGKTPPCVDLIINKKIPHVVIGCQDPFSKVAG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 G EI GI E +++I F+ +E+R Sbjct: 112 RGIAKLKEQGI--KVEI--GILENECKELIHRFYIFQEEKR 148 >gi|329735920|gb|EGG72197.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis VCU045] Length = 347 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 24/151 (15%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ A+ + + PVG+V V N +I+ + + K HAE+ AI M Sbjct: 4 FMDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAHLKKGDK----HAEVQAIEMAGL 59 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +YV+LEPC C I A I ++ Y + + G + Sbjct: 60 NTQ-----GATIYVSLEPCTHHGSTPPCVHKIIEAGISKVIYAVKDTTL--VSKGDEILR 112 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ +E + + +DFF +R Sbjct: 113 EAG----IEVEFQYNEN-AAALYRDFFTAKR 138 >gi|27468359|ref|NP_764996.1| riboflavin specific deaminase [Staphylococcus epidermidis ATCC 12228] gi|27315905|gb|AAO05040.1|AE016748_274 riboflavin specific deaminase [Staphylococcus epidermidis ATCC 12228] Length = 347 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 24/151 (15%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ A+ + + PVG+V V N +I+ + + K HAE+ AI M Sbjct: 4 FMDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAHLKKGDK----HAEVQAIEMAGL 59 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +YV+LEPC C I A I ++ Y + + G + Sbjct: 60 NTQ-----GATIYVSLEPCTHHGSTPPCVHKIIEAGISKVIYAVKDTTL--VSKGDEILR 112 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ +E + + +DFF +R Sbjct: 113 EAG----IEVEFQYNEN-AAALYRDFFTAKR 138 >gi|291533443|emb|CBL06556.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Megamonas hypermegale ART12/1] Length = 360 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 21/147 (14%) Query: 8 MSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A++ A NA R P VGAV V +N+++ +R T HAE+ A+ + Sbjct: 1 MRLAMQLAGNAIGRTSPNPLVGAVIVKDNRVVGCGWHREA----GTPHAEVHALNQAGEL 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 D+YVTLEPC C+ A+ A+++ +Y G + G + Sbjct: 57 AQ-----GADVYVTLEPCAHYGKTPPCSKALVEAKVKNVYGGLLDVNPKVAGKGFKILED 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146 A H + G + R+ + FFK Sbjct: 112 AGIH----VEYGFLQDELRKQNEVFFK 134 >gi|229103925|ref|ZP_04234603.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-28] gi|228679493|gb|EEL33692.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-28] Length = 360 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 44/146 (30%), Positives = 63/146 (43%), Gaps = 23/146 (15%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M ALE A NA P VG+V V +N+I+ + HAEI AIRM Sbjct: 1 MKLALENA-NAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGE----PHAEIHAIRMAG- 54 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 E +YVTLEPC+ CA AI A I+++ +P G + Sbjct: 55 ----EQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKVLQ 110 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ S+++ + F Sbjct: 111 DAG----IEVLVGVCEEESKKMNEVF 132 >gi|239617610|ref|YP_002940932.1| riboflavin biosynthesis protein RibD [Kosmotoga olearia TBF 19.5.1] gi|239506441|gb|ACR79928.1| riboflavin biosynthesis protein RibD [Kosmotoga olearia TBF 19.5.1] Length = 345 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 42/149 (28%), Positives = 60/149 (40%), Gaps = 18/149 (12%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM A+EEA+ L N P VGAV V N KI+S + HAEI+AI Sbjct: 2 DEKFMELAIEEARKGEGLVNPNPLVGAVIVKNGKILSTGYHEYFGG----RHAEIVAIEN 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + ++YVTLEPC C I +Y G +P G Sbjct: 58 A--KKMGYDIKGAEIYVTLEPCVHYGKTPPCTDRIIREGFSAVYIGTLDPNPMVHGKG-- 113 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + + GI E +++++I+ F Sbjct: 114 --EEKLKNAGICVKHGILEVKAKELIEVF 140 >gi|330976721|gb|EGH76762.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 378 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ VG V V +I+ + HAE+ A+R Sbjct: 9 DVHYMARALEMARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGE----PHAEVHALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P G Sbjct: 65 AGELA-----RGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGL- 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + + G+ E +R + + F K Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147 >gi|325568121|ref|ZP_08144562.1| riboflavin biosynthesis protein RibD [Enterococcus casseliflavus ATCC 12755] gi|325158322|gb|EGC70473.1| riboflavin biosynthesis protein RibD [Enterococcus casseliflavus ATCC 12755] Length = 358 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 19/145 (13%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N +M A+ EA+ + VGAV V ++I++ + HAE AI Sbjct: 2 HNEYMRLAIAEAKKGRYQTFTNPLVGAVIVKEQRVIAKGAHLVYGQ----PHAERNAIEQ 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 S E L LYVTLEPC C I + I+++ G +P G + Sbjct: 58 ---CHSSEDLINSTLYVTLEPCNHQGKQPPCTQLIIDSGIKKVVIGQLDPNPIVAGQGKR 114 Query: 116 FYTLATCHHSPEIYPGISEQRSRQI 140 F + ++ GI E R++ Sbjct: 115 FLE----NQGIDVLVGIEETEVRRL 135 >gi|124010107|ref|ZP_01694767.1| riboflavin biosynthesis protein RibD [Microscilla marina ATCC 23134] gi|123983875|gb|EAY24280.1| riboflavin biosynthesis protein RibD [Microscilla marina ATCC 23134] Length = 355 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 23/152 (15%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 FM AL+ A A ++ P VG V V +II ++ AHAE+ A+ Sbjct: 14 DEKFMQRALDLAVLGA--GKVSPNPMVGCVIVHQEQIIGEGWHQFYGK----AHAEVNAV 67 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + ++ +L E +YVTLEPC CA + +++R+ +P G Sbjct: 68 NA---VENKALLSEATVYVTLEPCAHQGKTPPCADLLIKHQVKRVVVCNQDPHPLVGGKG 124 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A E+ GI E + +++ + FF Sbjct: 125 LEKLRTAG----IEVTVGILEAQGKEVNKRFF 152 >gi|213969282|ref|ZP_03397420.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gi|213925960|gb|EEB59517.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] Length = 366 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 55/148 (37%), Gaps = 21/148 (14%) Query: 8 MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ ALE A+ VG V V + +I+ + + HAE+ A+R + Sbjct: 1 MAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGE----PHAEVHALREAGEL 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC CA A+ A + R+ +P +G Sbjct: 57 A-----RGATAYVTLEPCSHQGRTPPCADALISAGLARVVAAMQDPNPQVAGSGLLRLMT 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E +R + + F K Sbjct: 112 AG----ISVQCGVLESEARALNKGFIKR 135 >gi|190575897|ref|YP_001973742.1| putative deaminase [Stenotrophomonas maltophilia K279a] gi|190013819|emb|CAQ47457.1| putative deaminase [Stenotrophomonas maltophilia K279a] Length = 150 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 13/147 (8%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 + A+ EA+ +P+GA + +++ NR + D + H E A R Sbjct: 6 DYQALLQTAIAEARQGLAEGGVPIGAALYHNDGRLLGCGHNRRVQEGDPSVHGETDAFRK 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R Q + + TL PC C+ + I + G S GGI + Sbjct: 66 AGR---QRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESRTFQGGI----DWLRENG 118 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148 + + + Q ++ F + Sbjct: 119 VN----VID-LDSQECVDLLGGFIAQH 140 >gi|229134920|ref|ZP_04263727.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus BDRD-ST196] gi|228648595|gb|EEL04623.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus BDRD-ST196] Length = 379 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ AQ + + P VGAV V + KI+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAQGTSGQTSPNPMVGAVVVKDGKIVGMGAHMRAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M E + +YVTLEPC C + ++R+ + NG Sbjct: 67 MAG-----ERAKDATVYVTLEPCSHFGKTPPCCELLIEKGVQRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + E+ G+ E + + + FF K +R Sbjct: 122 RKLEEVG----IEVTTGVLEAEATLLNRYFFHYMKTKR 155 >gi|254236945|ref|ZP_04930268.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa C3719] gi|126168876|gb|EAZ54387.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa C3719] Length = 373 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++M+ ALE A+ VG V V + +++ + HAE+ A+R Sbjct: 5 DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGE----PHAEVHALRQ 60 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ +P G Sbjct: 61 AG-----ENARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLL 115 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E +R++ F K Sbjct: 116 RLMQAG----IAVQSGVLEAEARELNIGFIKR 143 >gi|313680606|ref|YP_004058345.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Oceanithermus profundus DSM 14977] gi|313153321|gb|ADR37172.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Oceanithermus profundus DSM 14977] Length = 380 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 22/150 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL A+ A P VGAV V +I+ + HAE+ A+R Sbjct: 7 DRRFMQRALALAERARGHTSPNPIVGAVVVSGGRIVGEGFHPRAGE----PHAEVFALRQ 62 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +YVTLEPC C+ A+ A + R+ Y A++P G +G Sbjct: 63 AGEAA-----RGATVYVTLEPCNHHGRTPPCSLALLEAGVSRVVYAAADP---GETSGGG 114 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 L + G+ E+ +R + FF Sbjct: 115 AERLRRA--GVRVEAGLLEEEARVQNRAFF 142 >gi|152986432|ref|YP_001346431.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa PA7] gi|150961590|gb|ABR83615.1| riboflavin biosynthesis protein RibD [Pseudomonas aeruginosa PA7] Length = 373 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++M+ ALE A+ VG V V + +++ + HAE+ A+R Sbjct: 5 DPLYMARALELARQGLYSTHPNPRVGCVLVRDGQVVGEGWHVRAGE----PHAEVHALRQ 60 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ A + R+ +P G Sbjct: 61 AGEKA-----RGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLL 115 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A ++ G+ E +R++ F K Sbjct: 116 RLMQAG----IAVHSGVLEAEARELNIGFIKR 143 >gi|313895132|ref|ZP_07828689.1| riboflavin biosynthesis protein RibD [Selenomonas sp. oral taxon 137 str. F0430] gi|312976027|gb|EFR41485.1| riboflavin biosynthesis protein RibD [Selenomonas sp. oral taxon 137 str. F0430] Length = 386 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM AL A+ A R P VGAV V + ++ +R HAEI A+R Sbjct: 24 RDEHFMWEALHLAEFARGRTSPNPLVGAVIVRDGIVVGSGWHRAAGE----PHAEIHALR 79 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 M + LYVTLEPC+ CA A+ A I R+ S+P +G Sbjct: 80 MAGELA-----RGATLYVTLEPCSHHGRTGPCAEAVIAAGIARVVTALSDPNPVVAGHGI 134 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + A E+ G+ + +R+ + F K Sbjct: 135 ERLRAAG----IEVTTGVLSEEARRQNEVFLK 162 >gi|78485744|ref|YP_391669.1| riboflavin biosynthesis protein RibD [Thiomicrospira crunogena XCL-2] gi|78364030|gb|ABB41995.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Thiomicrospira crunogena XCL-2] Length = 391 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 21/145 (14%) Query: 8 MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A++ A+ + VG V II+ ++ HAE +A+ Sbjct: 17 MQRAIDLARKGLYSTKPNPAVGCVITQQENIIAEGWHQKAGE----PHAERVALANA--- 69 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E + +YVTLEPC CA A+ + + R+ +P NG + Sbjct: 70 --TESVKGATVYVTLEPCSHHGKTPPCADALVDSGVARVVIAMQDPNPLVAGNGIKRLEQ 127 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A + GI + + + + F Sbjct: 128 AG----IVVDSGILSEEAAALNKGF 148 >gi|319955752|ref|YP_004167019.1| riboflavin biosynthesis protein ribd [Cellulophaga algicola DSM 14237] gi|319424412|gb|ADV51521.1| riboflavin biosynthesis protein RibD [Cellulophaga algicola DSM 14237] Length = 351 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 43/158 (27%), Positives = 60/158 (37%), Gaps = 21/158 (13%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 MK ++ ++ AQN VGAV V NKII HAE+ A Sbjct: 1 MKIHEFYILRCIQIAQNGLGTTAPNPMVGAVIVHENKIIGEGYTSPYGG----PHAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I +L +YVTLEPC CA I +I+ + G +P Sbjct: 57 INAVADKN---LLVNATIYVTLEPCSHHGKTPPCADLIIKHKIKNVVVGLLDPHEKVAGQ 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF--FKER 148 G Q A C + G+ E R+ + F F+E+ Sbjct: 114 GIQKLKDAGC----TVTVGVLENECREHHKRFLTFQEK 147 >gi|156935037|ref|YP_001438953.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Cronobacter sakazakii ATCC BAA-894] gi|156533291|gb|ABU78117.1| hypothetical protein ESA_02888 [Cronobacter sakazakii ATCC BAA-894] Length = 367 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 50/155 (32%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ AL+ A VG V V I+ + HAE+ A+R Sbjct: 2 SDEFYMARALKLAGQGRFTTHPNPRVGCVIVKEGVIVGEGFHLRAGG----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGDKA-----RGATAYVTLEPCSHHGRTPPCCDALINAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ + + + F K R Sbjct: 113 YRLQQAG----IEVSHGLMMSEAEALNKGFLKRMR 143 >gi|320586926|gb|EFW99589.1| cytosine deaminase [Grosmannia clavigera kw1407] Length = 170 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 20/156 (12%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP-------VGAVAV-LNNKIISRAGNRNRELKDVTA 52 M + AL+EA+ +P +GA V + ++ + N+ +L Sbjct: 1 MLSDQEALQIALDEAKAGFAEGGVPPRLTMAQIGAALVSADGTLMGKGRNQRVQLGSPIH 60 Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 H E + R+ + +Y TL PC MC A L I+R+ G + GG Sbjct: 61 HGETSTLYNTGRLSASAY-KGSTMYTTLSPCDMCTGACILYGIKRVVIGENRTFLGGEAY 119 Query: 113 GTQFYTLATCHHSPEIYPGISEQ-RSRQIIQDFFKE 147 Q ++ + + R++++ F + Sbjct: 120 LKQ--------RGIDVV--VLDNSECRELMEAFIAK 145 >gi|296387387|ref|ZP_06876886.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa PAb1] Length = 373 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++M+ ALE A+ VG V V + +++ + HAE+ A+R Sbjct: 5 DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGE----PHAEVHALRQ 60 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ +P G Sbjct: 61 AG-----ENARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLL 115 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E +R++ F K Sbjct: 116 RLMQAG----IAVQSGVLEAEARELNIGFIKR 143 >gi|326560692|gb|EGE11060.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis 46P47B1] Length = 350 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 18/157 (11%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +++ +M A+ A+ R VG V V ++ +I + + K HAEI A Sbjct: 7 IQQDIYYMQLAIAAAKKGIYTTRPNPAVGCVLVKDSLVIGQGYH----PKAGQPHAEIFA 62 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + YVTLEPC CA A+ A ++R+ + +P N Sbjct: 63 L--ADAKAQGFDTKGATAYVTLEPCSHTGRTPPCADALIAADLKRVVIASLDPNPKVAGN 120 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + + E+ G+ +Q++ + F K R Sbjct: 121 GIKKLQ----NAGIEVLVGVCDQQAAALNLGFLKAMR 153 >gi|86609303|ref|YP_478065.1| riboflavin biosynthesis protein RibD [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557845|gb|ABD02802.1| riboflavin biosynthesis protein RibD [Synechococcus sp. JA-2-3B'a(2-13)] Length = 370 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 58/155 (37%), Gaps = 27/155 (17%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP-----VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55 M +M L A++ R P V V V ++++ + HAE Sbjct: 1 MISDQQWMERCLSLARSTPQR---PSPNPRVSCVIVQGDRVVGEGVH----PGAGQPHAE 53 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109 +LA++ + LYV LEPC C AI A IRR+ G +P Sbjct: 54 VLALQQAGSLA-----RGATLYVNLEPCNHYGRTPPCTEAILAAGIRRVVVGMQDPNPLV 108 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A ++ G+ E+ +++ + F Sbjct: 109 AGKGIRRLQEAG----IDVTVGVLERECQELNEGF 139 >gi|307546181|ref|YP_003898660.1| riboflavin biosynthesis protein RibD [Halomonas elongata DSM 2581] gi|307218205|emb|CBV43475.1| riboflavin biosynthesis protein RibD [Halomonas elongata DSM 2581] Length = 384 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 52/151 (34%), Gaps = 21/151 (13%) Query: 5 NVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M+ AL A++ VG V V ++I + HAEI A+R Sbjct: 8 ERWMARALRLARHGLYTTAPNPRVGCVLVKEGRVIGEGWHERAGE----PHAEIHALRNA 63 Query: 63 CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQF 116 YVTLEPC+ CA A+ A + R+ +P G + Sbjct: 64 GEAA-----RGATAYVTLEPCSHQGRTGPCAVALVEAGVARVVVAMRDPNPQVAGRGIER 118 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E + + F Sbjct: 119 LRQAG----IEVEEGVLEAEAHALNSGFIAR 145 >gi|257483265|ref|ZP_05637306.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 167 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+N VG V V + +I+ + HAE+ A+R Sbjct: 9 DVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGE----PHAEVHALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + R+ +P G Sbjct: 65 AGELA-----RGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGL- 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + + G+ E +R + + F K Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147 >gi|326571732|gb|EGE21745.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis BC8] gi|326571813|gb|EGE21819.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis BC7] gi|326574353|gb|EGE24296.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis CO72] Length = 350 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 18/157 (11%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +++ +M A+ A+ R VG V V ++ +I + + K HAEI A Sbjct: 7 IQQDIYYMQLAIAAAKKGIYTTRPNPAVGCVLVKDSLVIGQGYH----PKAGQPHAEIFA 62 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + YVTLEPC CA A+ A ++R+ + +P N Sbjct: 63 L--ADAKAQGFDTKGATAYVTLEPCSHTGRTPPCADALIAADLKRVVIASLDPNPKVAGN 120 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + + E+ G+ +Q++ + F K R Sbjct: 121 GIKKLQ----NAGIEVLVGVCDQQAAALNLGFLKAMR 153 >gi|300871035|ref|YP_003785907.1| riboflavin biosynthesis protein RibD [Brachyspira pilosicoli 95/1000] gi|300688735|gb|ADK31406.1| riboflavin biosynthesis protein, RibD [Brachyspira pilosicoli 95/1000] Length = 365 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 26/154 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI-----P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 +M A+EEA+ E P VGAV V ++++I ++ HAEI Sbjct: 2 HEKYMRMAIEEAKK----GEGFTSPNPLVGAVIVKDDRVIGIGYHKKYGEN----HAEIN 53 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A + E + +YVTLEPC CA AI +++++ G + Sbjct: 54 AFLNA--KENGEDVEGASIYVTLEPCSHYGKTPPCADAIIKNKLKKVIIGCVDSNPKVAG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 NG + A + + R++ + FF Sbjct: 112 NGIKKLKDAGIEVVVNVLE----EECRKLNEVFF 141 >gi|71276434|ref|ZP_00652710.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase, C-terminal [Xylella fastidiosa Dixon] gi|170730982|ref|YP_001776415.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase, 5-amino-6-(5-phosphoribosylamino)uracil reductase [Xylella fastidiosa M12] gi|71162750|gb|EAO12476.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase, C-terminal [Xylella fastidiosa Dixon] gi|167965775|gb|ACA12785.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase, 5-amino-6-(5-phosphoribosylamino)uracil reductase [Xylella fastidiosa M12] Length = 364 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M AL A+ A P VG V V + +++ ++ D HAE+ A+R Sbjct: 7 DDHCHMERALCLAERGAYTTRPNPMVGCVIVHDGEVVGEGWHQR--AGDP--HAEVFALR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA A+ A +RR+ +P G Sbjct: 63 AAGDCA-----RGATAYVTLEPCAHSGRTPPCAMALIDAGVRRVVAAMVDPFPLVNGGGV 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + G+ E ++R + + F Sbjct: 118 TLLRAAG----VTVEHGLMEAQARALNRGF 143 >gi|154486847|ref|ZP_02028254.1| hypothetical protein BIFADO_00679 [Bifidobacterium adolescentis L2-32] gi|154084710|gb|EDN83755.1| hypothetical protein BIFADO_00679 [Bifidobacterium adolescentis L2-32] Length = 269 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 55/153 (35%), Gaps = 18/153 (11%) Query: 1 MKKGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + +M+ ALE A+ A + P VGAV V ++++ + HAE +A Sbjct: 8 MLQYREYMAQALELARKGAGWVDPNPLVGAVVVSGGEVLATGYHDRYRG----PHAERMA 63 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 L + TLEPC C I I R+ G+ +P Sbjct: 64 FDYADAH--GIDLTGATVIDTLEPCCHVGSQPACTDLILAHGIARVVVGSVDPNPIVAGK 121 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A E+ + + I + FF Sbjct: 122 GLRILEEAG----VEVVRDVMREECDAINRHFF 150 >gi|77361290|ref|YP_340865.1| riboflavin biosynthesis protein [Pseudoalteromonas haloplanktis TAC125] gi|76876201|emb|CAI87423.1| Riboflavin biosynthesis protein [Pseudoalteromonas haloplanktis TAC125] Length = 382 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 23/153 (15%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++M+ A+E A+ P VG V V NN+I+ ++ HAE+ A+ Sbjct: 11 DEMYMARAIELAKKGRFTT-TPNPNVGCVLVKNNEIVGEGFHQLAGQG----HAEVNALA 65 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC CA + A + ++ + G Sbjct: 66 MAGSKA-----KGATAYVTLEPCSHYGRTPPCAEGLKAAGVVKVIAAMVDSNPQVAGKGL 120 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + + A E+ G+ E ++R + FFK Sbjct: 121 KILSDAG----IEVAYGLLEAQARALNLGFFKR 149 >gi|254468535|ref|ZP_05081941.1| riboflavin biosynthesis protein RibD [beta proteobacterium KB13] gi|207087345|gb|EDZ64628.1| riboflavin biosynthesis protein RibD [beta proteobacterium KB13] Length = 363 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 19/154 (12%) Query: 2 KKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 K FM+ A++ A+ + N P VGAV V+++KII+ ++ E HAE++AI Sbjct: 5 KLDFFFMAQAIKLAKKGLGQCNPNPIVGAVIVVDDKIIATGYHQ--EFGGP--HAEVVAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + +L + L+VTLEPC C I I+R+ + +P NG Sbjct: 61 HN---CKDKALLKKSTLFVTLEPCAHEGKTPPCLDLILKHDIKRVVIASQDPNPKV--NG 115 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 +L E+ G+ E ++ + + FFK Sbjct: 116 ISIKSL--IEKGVEVDVGLMEDQAFNLNKGFFKR 147 >gi|326573500|gb|EGE23466.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis O35E] Length = 350 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 18/157 (11%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +++ +M A+ A+ R VG V V ++ +I + + K HAEI A Sbjct: 7 IQQDIYYMQLAIAAAKKGIYTTRPNPAVGCVLVKDSLVIGQGYH----PKAGQPHAEIFA 62 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + YVTLEPC CA A+ A ++R+ + +P N Sbjct: 63 L--ADAKAQGFDTKGATAYVTLEPCSHTGRTPPCADALIAADLKRVVIASLDPNPKVAGN 120 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + + E+ G+ +Q++ + F K R Sbjct: 121 GIKKLQ----NAGIEVLVGVCDQQAAALNLGFLKAMR 153 >gi|228922109|ref|ZP_04085419.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228837525|gb|EEM82856.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 360 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 43/146 (29%), Positives = 63/146 (43%), Gaps = 23/146 (15%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M ALE A A P VG+V V +N+I+ + HAEI AIRM Sbjct: 1 MKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMA-- 53 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +E +YVTLEPC+ CA AI A I+++ +P G + Sbjct: 54 ---EEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQ 110 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ S+++ + F Sbjct: 111 DAG----IEVLVGVCEEESKKMNEVF 132 >gi|260914242|ref|ZP_05920715.1| riboflavin biosynthesis protein RibD [Pasteurella dagmatis ATCC 43325] gi|260631875|gb|EEX50053.1| riboflavin biosynthesis protein RibD [Pasteurella dagmatis ATCC 43325] Length = 377 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + VFM AL+ AQ P VG V V + I+ + + HAE++A+R Sbjct: 7 QDAVFMQMALDLAQQGQFTTTPNPSVGCVLVKDGSIVGKGFHFKAGE----PHAEVMALR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E YVTLEPC CA + A + R+ +P G Sbjct: 63 DAG-----EQAKGATAYVTLEPCSHFGRTPPCAKGLIEAGVARVVSAMRDPNPQVAGKGL 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 Q + G+ E+++ + + F K R Sbjct: 118 QMLAEQGIESAV----GLLEEKAEWLNRGFLKRMR 148 >gi|295096804|emb|CBK85894.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 367 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++M+ A++ AQ + P VG V V + +I+ + HAE+ A+RM Sbjct: 3 DEMYMARAMKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGE----PHAEVHALRM 58 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC C A+ A + R+ +P + G Sbjct: 59 AGEKA-----RGATAYVTLEPCSHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVVGRGLY 113 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 ++ G+ Q + I + F K R Sbjct: 114 RLQQEG----IDVSHGLMMQDAENINKGFLKRMR 143 >gi|292492824|ref|YP_003528263.1| riboflavin biosynthesis protein RibD [Nitrosococcus halophilus Nc4] gi|291581419|gb|ADE15876.1| riboflavin biosynthesis protein RibD [Nitrosococcus halophilus Nc4] Length = 373 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 58/158 (36%), Gaps = 23/158 (14%) Query: 1 MKK--GNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M++ +M+ AL+ A + P VG V V +I+ ++ AHAE+ Sbjct: 1 MEQVNDRAYMARALKLAWRGLFTTDPNPRVGCVLVRAGEIVGEGWHQWAGD----AHAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+R YVTLEPC C A+ A + R+ +P Sbjct: 57 NALRQA-----DVRARGATCYVTLEPCCHRGRTPPCTEALIEAGVVRVVAAMRDPNPKVA 111 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 G A ++ G+ ++ ++ + F + Sbjct: 112 GQGLAQLREAGL----QVEYGLLQEEAQALNPGFVQRL 145 >gi|194016088|ref|ZP_03054703.1| riboflavin biosynthesis protein RibD [Bacillus pumilus ATCC 7061] gi|194012443|gb|EDW22010.1| riboflavin biosynthesis protein RibD [Bacillus pumilus ATCC 7061] Length = 361 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 61/155 (39%), Gaps = 25/155 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 MK +M A+ A+ A++ + P VGAV V +I+ + HAEI Sbjct: 1 MKDDVFYMKLAIANAK--AMKGQTSPNPLVGAVIVQQGEIVGMGAHMKAGE----PHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 A+ M LYVTLEPC+ C AI + ++R+ +P Sbjct: 55 HALHMAGEKA-----EGAHLYVTLEPCSHHGKTGPCTEAIIKSGVKRVVIATQDPNPLVA 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G A E+ GI +Q + ++ FF Sbjct: 110 GKGITVLKQAG----IEVDEGICKQEADRLNVPFF 140 >gi|297804068|ref|XP_002869918.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis lyrata subsp. lyrata] gi|297315754|gb|EFH46177.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis lyrata subsp. lyrata] Length = 426 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 61/150 (40%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M +E A+ A + P VG V V + I+ + + K HAE+ A+R Sbjct: 73 DDSFYMRKCVELAKRAIGCTSPNPMVGCVIVKDGDIVGQGFH----PKAGQPHAEVFALR 128 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YV+LEPC C A+ A+++R+ G +P +G Sbjct: 129 DAGELAEN-----ATAYVSLEPCNHYGRTPPCTEALIKAKVKRVVVGMVDPNPIVSSSGI 183 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ E+ +++ + F Sbjct: 184 SRLKDAG----IDVTVGVEEELCKKMNEGF 209 >gi|229071616|ref|ZP_04204834.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus F65185] gi|228711552|gb|EEL63509.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus F65185] Length = 379 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A++ Sbjct: 11 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + + +YVTLEPC C + ++R+ + NG Sbjct: 67 MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIERGVKRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 RRLEEA----RIEVTTGVLEADAVLLNRYFFHYMKTKR 155 >gi|24374975|ref|NP_719018.1| riboflavin biosynthesis protein RibD [Shewanella oneidensis MR-1] gi|24349701|gb|AAN56462.1|AE015783_5 riboflavin biosynthesis protein RibD [Shewanella oneidensis MR-1] Length = 381 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N MS A++ A+ R VG V V +N+I+ ++ HAE+ A+RM Sbjct: 7 DNQMMSRAIQLARKGFYTTRPNPSVGCVIVNDNQIVGEGYHQKAGE----PHAEVHALRM 62 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ ++R+ +P G Q Sbjct: 63 AGELA-----RGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQ 117 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A ++ G+ + + F K Sbjct: 118 MLRDAG----IQVDVGLHRDEAYALNLGFMKR 145 >gi|144897824|emb|CAM74688.1| Riboflavin biosynthesis protein [Magnetospirillum gryphiswaldense MSR-1] Length = 370 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 52/151 (34%), Gaps = 25/151 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M AL A+ + P VG V V + +++ R + HAE A+ Sbjct: 10 DRAHMRAALALAKRGL--GNVWPNPAVGCVIVADGRVVGRGWTQPGGR----PHAETEAL 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 M + YVTLEPC CA A+ A IRR+ +P G Sbjct: 64 AMAGALA-----RGGTAYVTLEPCSHHGKTPPCAEALVAAGIRRVVVAIQDPDPRVAGRG 118 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + G+ + + ++ F Sbjct: 119 IALLQAAGL----SVVTGVMAEEAAELNAGF 145 >gi|46579612|ref|YP_010420.1| riboflavin biosynthesis protein RibD [Desulfovibrio vulgaris str. Hildenborough] gi|46449027|gb|AAS95679.1| riboflavin biosynthesis protein RibD [Desulfovibrio vulgaris str. Hildenborough] gi|311233416|gb|ADP86270.1| riboflavin biosynthesis protein RibD [Desulfovibrio vulgaris RCH1] Length = 377 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 55/146 (37%), Gaps = 19/146 (13%) Query: 7 FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+ A+ VGAV V + ++ +R + HAE+ +R Sbjct: 8 FMREAIALAERGRWYAAPNPTVGAVLVRDGEVAARGWHTGYGK----PHAEVECLRDAAS 63 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 L VTLEPC C+ AI A I R+ G ++P G ++ Sbjct: 64 KGVDP--AHCTLVVTLEPCNHHGKTPPCSHAIVEAGITRVVVGLADPNPVASG-GAEYLR 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144 H + G+ EQ ++ DF Sbjct: 121 A----HGVTVDMGVCEQECHDLVADF 142 >gi|42783225|ref|NP_980472.1| riboflavin biosynthesis protein RibD [Bacillus cereus ATCC 10987] gi|42739153|gb|AAS43080.1| riboflavin biosynthesis protein RibD [Bacillus cereus ATCC 10987] Length = 370 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A+ Sbjct: 2 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVYALH 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + ++R+ + NG Sbjct: 58 MAGEKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKGVKRVVIATLDCNPLVSGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 113 RKLEEAG----IEVTTGVLEAEAILLNRYFFHYMKTKR 146 >gi|282889950|ref|ZP_06298485.1| hypothetical protein pah_c008o037 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500143|gb|EFB42427.1| hypothetical protein pah_c008o037 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 359 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 42/151 (27%), Positives = 59/151 (39%), Gaps = 24/151 (15%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M AL A A L P VGAV V KI+ AHAEI+A+R Sbjct: 1 MDRALALATQARLL-SPPNPWVGAVIVKQGKIVGEGF----TQAPGEAHAEIMALRQALH 55 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LYVTLEPC C AI A+I + +P G Q Sbjct: 56 QAEN-----STLYVTLEPCSHFGKTPPCVNAIIQAKIAHVVIALEDPDPQVSGRGIQKLK 110 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF-FKER 148 A + G+ +QR+ ++++ + F+ + Sbjct: 111 EAG----ISVTVGVEQQRATELLEPYLFQRK 137 >gi|254521581|ref|ZP_05133636.1| cytosine deaminase [Stenotrophomonas sp. SKA14] gi|219719172|gb|EED37697.1| cytosine deaminase [Stenotrophomonas sp. SKA14] Length = 150 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 52/151 (34%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 + A+ EA+ +P+GA + +++ NR + D + H E A R Sbjct: 6 DYQALLQTAIAEARQGLAEGGVPIGAALYHNDGRLLGCGHNRRVQEGDPSVHGETDAFRK 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFY 117 R Q + + TL PC C+ + I + G S GGI ENG Sbjct: 66 AGR---QRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESRTFQGGIAWLRENGVNVI 122 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 L + Q ++ F + Sbjct: 123 DLDS-------------QECVDLLGGFIAQH 140 >gi|291295639|ref|YP_003507037.1| riboflavin biosynthesis protein RibD [Meiothermus ruber DSM 1279] gi|290470598|gb|ADD28017.1| riboflavin biosynthesis protein RibD [Meiothermus ruber DSM 1279] Length = 384 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 24/155 (15%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ AL+ A+ P VGAV V N +I+ + HAE+ A+ Sbjct: 11 DERYLRRALQLAERGRGHT-HPNPLVGAVLVKNGRIVGEGYHPRAGE----PHAEVFALH 65 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E LYV+LEPC C+ A+ A + R+ A +P Sbjct: 66 QAG-----EEAQGATLYVSLEPCDHHGRTPPCSLALLEAGVGRVVVAARDPNPKAQGGLE 120 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + + G+ E +R + FF R Sbjct: 121 RLRSA-----GVAVELGLLEAEARAQNEVFFHALR 150 >gi|242374059|ref|ZP_04819633.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus epidermidis M23864:W1] gi|242348184|gb|EES39786.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus epidermidis M23864:W1] Length = 347 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 24/151 (15%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM+ A++ AQ + I PVG+V V + +I+ + + K HAE+ A+ M + Sbjct: 4 FMNYAIQLAQMVDGQTGINPPVGSVVVKDGRIVGLGAHLKKGDK----HAEVQALDMAGQ 59 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + +YV+LEPC C I I+++ Y + + G + Sbjct: 60 AA-----KDATIYVSLEPCTHHGSTPPCVDKIIEFGIKKVIYAIKDTTL--VSKGDEILK 112 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ +E + ++ +DFF +R Sbjct: 113 EAG----IEVEFQFNED-AAELYKDFFPAKR 138 >gi|169797510|ref|YP_001715303.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Acinetobacter baumannii AYE] gi|213155676|ref|YP_002317721.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii AB0057] gi|215484945|ref|YP_002327186.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii AB307-0294] gi|301346214|ref|ZP_07226955.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii AB056] gi|301512963|ref|ZP_07238200.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii AB058] gi|301595094|ref|ZP_07240102.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii AB059] gi|332851510|ref|ZP_08433507.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii 6013150] gi|332866790|ref|ZP_08437194.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii 6013113] gi|169150437|emb|CAM88334.1| bifunctional protein [Includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP reductase) ] [Acinetobacter baumannii AYE] gi|213054836|gb|ACJ39738.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii AB0057] gi|213986529|gb|ACJ56828.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii AB307-0294] gi|332729963|gb|EGJ61294.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii 6013150] gi|332734398|gb|EGJ65518.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii 6013113] Length = 361 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +K+ +M A+E A+ P VG V V +N++I + K HAE+ A Sbjct: 4 LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQVIGEGFH----PKAGQPHAEVFA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R YVTLEPC CA A+ A+++++ +P Sbjct: 60 LRQAGEQAQ-----GATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGK 114 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G Q + E+ GI E + Q+ Q F K Sbjct: 115 GVQILK----NAGIEVEIGICEDLAAQLNQGFLKA 145 >gi|217961603|ref|YP_002340173.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH187] gi|222097559|ref|YP_002531616.1| riboflavin biosynthesis protein ribd [Bacillus cereus Q1] gi|217063616|gb|ACJ77866.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH187] gi|221241617|gb|ACM14327.1| riboflavin biosynthesis protein RibD [Bacillus cereus Q1] Length = 370 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A+ Sbjct: 2 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + ++R+ + NG Sbjct: 58 MAGDKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKEVKRVVIATLDCNPLVSGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E+ + + + FF K +R Sbjct: 113 KRLEEAG----IEVTTGVLEEEAVLLNRYFFHYMKTKR 146 >gi|184201786|ref|YP_001855993.1| guanine deaminase [Kocuria rhizophila DC2201] gi|183582016|dbj|BAG30487.1| guanine deaminase [Kocuria rhizophila DC2201] Length = 170 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 31/82 (37%), Positives = 41/82 (50%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 + P GA+ V + A NR D TAHAE+ AIR C L L LY + E Sbjct: 34 DGGPFGALLVTADGREFTAVNRVTADNDPTAHAEVCAIRAACSALGTHDLGGATLYSSCE 93 Query: 82 PCTMCAAAISLARIRRLYYGAS 103 PC MC +A AR+ R+++ A Sbjct: 94 PCPMCLSAALWARLDRVFFAAD 115 >gi|119356772|ref|YP_911416.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Chlorobium phaeobacteroides DSM 266] gi|119354121|gb|ABL64992.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Chlorobium phaeobacteroides DSM 266] Length = 366 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 60/155 (38%), Gaps = 23/155 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 + +M+ E A + P VG+V V N +I+ + HAE+ Sbjct: 4 ESHEWYMNRCFELALQG--SGMVSPNPMVGSVIVHNGEIVGEGYHERFGG----PHAEVH 57 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AI + + E+L LYV LEPC CA I RI R+ G +P Sbjct: 58 AI---ASVGNAEVLQNSTLYVNLEPCSHFGKTPPCADLILAKRIPRVVIGCRDPHEKVAG 114 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + T A ++ G+ + ++ + F K Sbjct: 115 KGIERLTAAG----VQVTEGVLMPEALKLNEAFIK 145 >gi|260910408|ref|ZP_05917080.1| riboflavin biosynthesis protein RibD [Prevotella sp. oral taxon 472 str. F0295] gi|260635484|gb|EEX53502.1| riboflavin biosynthesis protein RibD [Prevotella sp. oral taxon 472 str. F0295] Length = 351 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 22/160 (13%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +M L+ A+ L P VGAV V ++II + + HAE+ A Sbjct: 48 TTDERYMRRCLQLARCGLL-GAKPNPMVGAVIVYRDRIIGEGYH----VHCGEGHAEVNA 102 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 R + +LP+ LYV+LEPC CA I + R+ G +P Sbjct: 103 F-AAVRPEDESLLPQSTLYVSLEPCSHYGKTPPCADLIIRKEVARVVVGCIDPFAKVQGR 161 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 G + A E+ G+ E+ + + F +E+R Sbjct: 162 GIEKLRRAG----IEVVVGVLEKECLALNRHFIVFQREQR 197 >gi|296114110|ref|YP_003628048.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis RH4] gi|295921804|gb|ADG62155.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis RH4] Length = 350 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 18/157 (11%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +++ +M A+ A+ R VG V V ++ +I + + K HAEI A Sbjct: 7 IQQDIYYMQLAIAAAKKGIYTTRPNPAVGCVLVKDSLVIGQGYH----PKAGQPHAEIFA 62 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + YVTLEPC CA A+ A +RR+ + +P N Sbjct: 63 L--ADAKAQGFDTKGATAYVTLEPCSHTGRTPPCADALIAANLRRVVVASLDPNPKVAGN 120 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + + E+ G+ +Q++ + F K R Sbjct: 121 GIKKLQ----NAGIEVLVGVCDQQAAALNLGFLKAMR 153 >gi|196038826|ref|ZP_03106134.1| riboflavin biosynthesis protein RibD [Bacillus cereus NVH0597-99] gi|196030549|gb|EDX69148.1| riboflavin biosynthesis protein RibD [Bacillus cereus NVH0597-99] Length = 370 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 55/158 (34%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ VGAV V + I+ + + HAE+ A+ Sbjct: 2 TDQEYMRIALQLAEGTCGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + I R+ + NG Sbjct: 58 MAGDKA-----KGATVYVTLEPCSHFGKTPPCCDLLIKKGITRVVIATLDCNPLVSGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 113 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 146 >gi|229140846|ref|ZP_04269391.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus BDRD-ST26] gi|228642636|gb|EEK98922.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus BDRD-ST26] Length = 379 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + ++R+ + NG Sbjct: 67 MAGDKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKEVKRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E+ + + + FF K +R Sbjct: 122 KRLEEAG----IEVTTGVLEEEAVLLNRYFFHYMKTKR 155 >gi|227824644|ref|ZP_03989476.1| riboflavin biosynthesis protein ribD [Acidaminococcus sp. D21] gi|226905143|gb|EEH91061.1| riboflavin biosynthesis protein ribD [Acidaminococcus sp. D21] Length = 366 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 56/151 (37%), Gaps = 22/151 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 +M AL+ A+ A P VG V V + ++ + + HAEI A+ Sbjct: 2 TDEEYMQMALDLAEKARGATSPNPLVGCVIVSPDGHVVGKGYHHKAGE----PHAEINAM 57 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 YVTLEPC+ C A+ A I+++ A++P G Sbjct: 58 DDAGEKT-----AGATAYVTLEPCSHYGRTGPCCEALIKAGIKKVVAAATDPNPRVSGRG 112 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ ++ + + F Sbjct: 113 FRRLEEAG----VEVVSGVLADKAYRQNEIF 139 >gi|91776267|ref|YP_546023.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Methylobacillus flagellatus KT] gi|91710254|gb|ABE50182.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Methylobacillus flagellatus KT] Length = 377 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 21/153 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL EA + P VG V V + K++ R + HAE+ A+R Sbjct: 15 SDHHYMNLALREAARGLYSTSPNPRVGCVIVKDGKVVGRGAHLRAGE----PHAEVHALR 70 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + YVTLEPC CA A+ A +RR+ +P +G Sbjct: 71 MAGGQAAGAD-----AYVTLEPCSHFGRTPPCADALVKAGVRRVVAAMQDPNPLVSGSGL 125 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + + H E+ G+ E +R++ F Sbjct: 126 KRLST----HGIEVAYGLLEHEARELNAGFISR 154 >gi|319651135|ref|ZP_08005268.1| riboflavin specific deaminase [Bacillus sp. 2_A_57_CT2] gi|317397189|gb|EFV77894.1| riboflavin specific deaminase [Bacillus sp. 2_A_57_CT2] Length = 365 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 25/153 (16%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +M A+ A AA + + P VGAV V N +I+ + LK T HAE+ A Sbjct: 2 NHQEYMELAISLA--AATKGQTSPNPQVGAVVVKNGEILGMGAH----LKAGTPHAEVHA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + E D+YVTLEPC CA I + I R++ +++P Sbjct: 56 I-----AAAGEKAKGADIYVTLEPCSHFGRTPPCADLIINSGINRVFIASADPNPLVSGK 110 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A E+ G+ ++ + + + FF Sbjct: 111 GIERMQDAG----IEVVTGLLKEEADALNEPFF 139 >gi|239637909|ref|ZP_04678870.1| riboflavin biosynthesis protein RibD [Staphylococcus warneri L37603] gi|239596472|gb|EEQ79008.1| riboflavin biosynthesis protein RibD [Staphylococcus warneri L37603] Length = 347 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 27/157 (17%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K FM+ A++ AQ + + PVG+V V + +I+ + + K HAE+ A Sbjct: 1 MSK---FMNYAIQLAQMVDGQTGVNPPVGSVVVKDGRIVGIGAHLRKGDK----HAEVQA 53 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + M Q +YV+LEPC C I A I ++ Y + I Sbjct: 54 LDMA-----QSEANGATIYVSLEPCTHHGSTPPCVDKIIEAGIHKVIYAVKDTTL--ISK 106 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + E+ + + Q+ QDFF +R Sbjct: 107 GDDILK----NAGIEVEFQYNA-VAAQLYQDFFTAKR 138 >gi|325680426|ref|ZP_08159976.1| riboflavin biosynthesis protein RibD [Ruminococcus albus 8] gi|324107864|gb|EGC02130.1| riboflavin biosynthesis protein RibD [Ruminococcus albus 8] Length = 369 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 19/154 (12%) Query: 1 MKKGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + FM AL+ A+N N P VGAV V + KII+ + + HAE A Sbjct: 1 MDR-EDFMQAALDSAENGMGFVNPNPMVGAVIVRDGKIIASGFHERY----GSLHAERSA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + D+YVTLEPC C AI+ IR +Y G+S+P Sbjct: 56 FAQCNKKGIN--CAGADMYVTLEPCCHHGKQPPCTEAIAAHGIRHVYIGSSDPNPLVSGK 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G F + G+ +++ ++ + FFK Sbjct: 114 GAAFLRSRGIG----VTEGVLKEKCDKLNEIFFK 143 >gi|326561735|gb|EGE12070.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis 7169] gi|326569043|gb|EGE19112.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis BC1] Length = 350 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 18/157 (11%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +++ +M A+ A+ R VG V V ++ +I + + K HAEI A Sbjct: 7 IQQDIYYMQLAIAAAKKGIYTTRPNPAVGCVLVKDSLVIGQGYH----PKAGQPHAEIFA 62 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + YVTLEPC CA A+ A +RR+ + +P N Sbjct: 63 L--ADAKAQGFDTKGATAYVTLEPCSHTGRTPPCADALIAANLRRVVVASLDPNPKVAGN 120 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + + E+ G+ +Q++ + F K R Sbjct: 121 GIKKLQ----NAGIEVLVGVCDQQAAALNLGFLKAMR 153 >gi|304407004|ref|ZP_07388658.1| riboflavin biosynthesis protein RibD [Paenibacillus curdlanolyticus YK9] gi|304343991|gb|EFM09831.1| riboflavin biosynthesis protein RibD [Paenibacillus curdlanolyticus YK9] Length = 373 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 57/151 (37%), Gaps = 22/151 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI-PV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ AQ A + I PV G V V +II + R HAE+ A+R Sbjct: 6 NDAFYMRLALQMAQGATGQTSINPVVGCVIVKEGRIIGMGAHLKRGEG----HAEVNALR 61 Query: 61 MGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 M + YVTLEPC C + ARI R+ A +P G Sbjct: 62 MAG-----DEAEGATAYVTLEPCSHYRKKTPPCCDRLIEARIARVVVAAQDPNPQVAGTG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A + G+ + S + + + Sbjct: 117 VEKLRAAG----IAVSVGLLAEESHAMNERY 143 >gi|251795232|ref|YP_003009963.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2] gi|247542858|gb|ACS99876.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2] Length = 159 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 2/107 (1%) Query: 1 MKKGN-VFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58 MK+ + ++ +E ++ + P GA+ V +I+ N K T HAE Sbjct: 1 MKQDHAYYLKYCIEVSRRSRENGNTPFGAILVNEQGEIVLEQENVELTEKRCTGHAETAL 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 + L LY T EPC MC+ AI + ++ Y A+ Sbjct: 61 MEKASHQFEHHDLWNYTLYTTFEPCAMCSGAIYWGNVGKVVYAATEE 107 >gi|83941150|ref|ZP_00953612.1| riboflavin biosynthesis protein RibD [Sulfitobacter sp. EE-36] gi|83846970|gb|EAP84845.1| riboflavin biosynthesis protein RibD [Sulfitobacter sp. EE-36] Length = 367 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 53/155 (34%), Gaps = 25/155 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M FM+ AL + + + P VG V V +I+ R + HAE Sbjct: 1 MSDDARFMALALSLGRRG--QGAVWPNPAVGCVIVQQGRIVGRGWTQPGGR----PHAEP 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+R +YVTLEPC CA A+ A+ R+ ++ Sbjct: 55 QALRQAGPAAQ-----GATVYVTLEPCAHTGKTPPCADALVAAKPARVVIACTDSDTRVS 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G A + G+ E +R FF Sbjct: 110 GKGIAILRAAG----IIVDVGVLEDEARADHLGFF 140 >gi|33152274|ref|NP_873627.1| riboflavin biosynthesis protein RibD [Haemophilus ducreyi 35000HP] gi|33148497|gb|AAP96016.1| riboflavin-specific deaminase [Haemophilus ducreyi 35000HP] Length = 368 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ A+ A+ A N P VG V V N++II+ ++ HAE AI Sbjct: 2 TDVDYMARAIALAEQARGWTNPNPLVGCVIVKNDQIIAEGYHQKVGE----WHAERNAI- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + Q+ L YVTLEPC C + I +++ G+ +P G Sbjct: 57 ----LNCQQDLTGATAYVTLEPCCHHGRTPPCTDLLIERGINKVFVGSRDPNPLVTGKGI 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A E+ + Q+ FF Sbjct: 113 KQLQAAG----IEVITDFMREACDQLNPIFF 139 >gi|218781151|ref|YP_002432469.1| riboflavin biosynthesis protein RibD [Desulfatibacillum alkenivorans AK-01] gi|218762535|gb|ACL05001.1| riboflavin biosynthesis protein RibD [Desulfatibacillum alkenivorans AK-01] Length = 372 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 27/157 (17%) Query: 2 KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 K+ +M AL A+ P VGAV V + K+I + ++ HAEI Sbjct: 3 KQDTQYMRQALALAEKG--TGNTSPNPMVGAVIVKDGKVIGQGWHKKAGG----PHAEIF 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ +YVTLEPC C+ A+ A I ++ +P Sbjct: 57 ALEEAGA-----DAKGATMYVTLEPCNHHGKTPPCSHAVLKAGIAKVIAAIKDPNPKAQG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 G ++ E G+ E +R+ +FF + Sbjct: 112 -GLKYLQENG----VETQWGVCEAEARKQN-EFFIKH 142 >gi|152979034|ref|YP_001344663.1| riboflavin biosynthesis protein RibD [Actinobacillus succinogenes 130Z] gi|150840757|gb|ABR74728.1| riboflavin biosynthesis protein RibD [Actinobacillus succinogenes 130Z] Length = 375 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 57/156 (36%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ +M AL+ A+ P VG V V +NKI+ + HAE++AI Sbjct: 6 EQDQAYMQLALDLARRGRFTTTPNPNVGCVLVKHNKIVGTGFHFRAGE----PHAEVMAI 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R YVTLEPC CA + A + ++ +P G Sbjct: 62 RDAGDNTQ-----GATAYVTLEPCSHYGRTPPCAQGLINAGVTKVIIATQDPNPQVAGRG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + A + G+ +++ + F K R Sbjct: 117 LKMLQDAGIESAV----GLLAEKAEAVNLGFLKRMR 148 >gi|282900583|ref|ZP_06308525.1| Riboflavin biosynthesis protein RibD [Cylindrospermopsis raciborskii CS-505] gi|281194383|gb|EFA69338.1| Riboflavin biosynthesis protein RibD [Cylindrospermopsis raciborskii CS-505] Length = 385 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M LE A+ A R P VGAV V + +I+ + HAE+ A+R Sbjct: 17 DALMMQRCLELARLALGRTSPNPLVGAVVVKDGEIVGEGFHPRAGE----PHAEVFALRA 72 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E +YV+LEPC C+ ++ A + ++ G +P G Sbjct: 73 AG-----ERARGATIYVSLEPCNHYGRTPPCSLSLINAGVAKVVVGMVDPNPLVAGAGIA 127 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ +++ + F Sbjct: 128 RLRAAG----IEVIIGVEEEACQKLNEGF 152 >gi|330685448|gb|EGG97103.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis VCU121] Length = 347 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 27/157 (17%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K FM+ A++ AQ + + PVG+V V + +I+ + + K HAE+ A Sbjct: 1 MSK---FMNYAIQLAQMVDGQTGVNPPVGSVVVKDGRIVGIGAHLRKGDK----HAEVQA 53 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + M Q +YV+LEPC C I A I+++ Y + I Sbjct: 54 LDMA-----QSEAKGATIYVSLEPCTHHGSTPPCVDKIIEAGIQKVIYAVKDTTL--ISK 106 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + E+ + + Q+ QDFF +R Sbjct: 107 GDDILK----NAGIEVEFQYNA-VAAQLYQDFFTAKR 138 >gi|229013322|ref|ZP_04170462.1| RibD (Riboflavin-specific deaminase) [Bacillus mycoides DSM 2048] gi|228747915|gb|EEL97780.1| RibD (Riboflavin-specific deaminase) [Bacillus mycoides DSM 2048] Length = 379 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 61/158 (38%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ AQ + + P VGAV V + KI+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAQGTSGQTSPNPMVGAVVVKDGKIVGMGAHMRAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M E + +YVTLEPC C + ++R+ + NG Sbjct: 67 MAG-----ERAKDATVYVTLEPCSHFGKTPPCCELLIEKGVQRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A ++ G+ + + + FF K +R Sbjct: 122 RILEEAG----IKVTTGVLGAEATLLNRYFFHYMKTKR 155 >gi|157691490|ref|YP_001485952.1| bifunctional 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus pumilus SAFR-032] gi|157680248|gb|ABV61392.1| bifunctional 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus pumilus SAFR-032] Length = 361 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 25/155 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 MK +M A+ A+ A++ + P VGAV V +I+ + HAEI Sbjct: 1 MKDDVFYMELAIANAK--AMKGQTSPNPLVGAVIVQQGEIVGMGAHMKAGE----PHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 A++M +E LYVTLEPC+ C AI + ++R+ +P Sbjct: 55 HALQMA-----REKAKGAHLYVTLEPCSHYGKTGPCTEAIIKSGVKRVVIATQDPNPLVA 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G A E+ GI +Q + ++ FF Sbjct: 110 GKGMTMLKQAG----IEVDEGICKQEADRLNVPFF 140 >gi|312115805|ref|YP_004013401.1| CMP/dCMP deaminase zinc-binding protein [Rhodomicrobium vannielii ATCC 17100] gi|311220934|gb|ADP72302.1| CMP/dCMP deaminase zinc-binding protein [Rhodomicrobium vannielii ATCC 17100] Length = 212 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 6/142 (4%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M +E ++ A + P GA+ L+ +I++ AGNR D + HAEI+AI Sbjct: 8 DEAMMLRCIELSREATREGDYPFGALIALDGEIVAEAGNRAMRDADFSRHAEIIAIAAAL 67 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT----- 118 + + + L LY T+EPC MC+ I A + R+ Y ++P GG+ T + Sbjct: 68 KTVGRGGLARATLYSTVEPCAMCSFCIREAWVGRVAYALASPAMGGVSKWTILHDADLGR 127 Query: 119 -LATCHHSPEIYPGISEQRSRQ 139 L +PE+ G+ + Sbjct: 128 QLPIFGPAPEVVSGLLAGEALA 149 >gi|240949069|ref|ZP_04753420.1| riboflavin biosynthesis protein [Actinobacillus minor NM305] gi|240296542|gb|EER47167.1| riboflavin biosynthesis protein [Actinobacillus minor NM305] Length = 355 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 21/146 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ A+ A+ A N P VG V V N++I++ + HAE AI + Sbjct: 1 MARAIALAEKARGWTNPNPLVGCVIVKNDEILAEGYHERIGG----WHAERNAI-----L 51 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 S L YVTLEPC C+ + I +++ G+ +P G + Sbjct: 52 NSNADLRGATAYVTLEPCCHHGRTPPCSDLLIERGISKVFIGSRDPNPLVSGKGVKQLQA 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ + ++ FF Sbjct: 112 AG----IEVVTDFMREECDRLNPIFF 133 >gi|301156580|emb|CBW16051.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Haemophilus parainfluenzae T3T1] Length = 376 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 54/155 (34%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM ALE A P VG V V N +I+ + + + HAE +A+ Sbjct: 8 DDVKFMQLALELAAKGQYTTTPNPSVGCVLVKNGEIVGKGFH--FKTGQP--HAERVALA 63 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA + A + R+ ++P G Sbjct: 64 DAGEKA-----KGATAYVTLEPCSHYGRTPPCALGLIEAGVSRVVAAMADPNPQVAGKGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + A + + +++ + + F K R Sbjct: 119 KMLADAGIPSAVN----LLNEQAEALNKGFLKRMR 149 >gi|113475344|ref|YP_721405.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Trichodesmium erythraeum IMS101] gi|110166392|gb|ABG50932.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Trichodesmium erythraeum IMS101] Length = 374 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 52/151 (34%), Gaps = 25/151 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M+ LE A+ A P VG V + N +II + HAE+ A+ Sbjct: 14 DPLIMAHCLELARRAL--GNTAPNPLVGCVIIKNGQIIGEGFH----PGAGYPHAEVFAL 67 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 YV LEPC C A+ A + R+ G +P G Sbjct: 68 TEAGEKA-----RGATAYVNLEPCNHYGRTPPCTDALIAAGVARVVIGMIDPNPLVAGAG 122 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E R++ + F Sbjct: 123 VAKLQDAG----IEVVVGVLEAECRELNEAF 149 >gi|303238038|ref|ZP_07324581.1| riboflavin biosynthesis protein RibD [Prevotella disiens FB035-09AN] gi|302481828|gb|EFL44880.1| riboflavin biosynthesis protein RibD [Prevotella disiens FB035-09AN] Length = 335 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 18/152 (11%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58 + ++M L+ A+N L VGAV V + KII + HAE+ A Sbjct: 7 DRDEMYMCRCLQLAKNGRLNAKPNPMVGAVIVSHDGKIIGEGYHVRCGEG----HAEVNA 62 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 R + +L E +YV+LEPC CA I +RR+ G +P Sbjct: 63 FHSV-RPTDEHLLSESTIYVSLEPCSHYGKTPPCADLIVRKGVRRMVCGCVDPFSEVQGR 121 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A E+ G+ EQ + ++F Sbjct: 122 GIERIRQAG----IEVKVGVLEQECLALNREF 149 >gi|300113757|ref|YP_003760332.1| riboflavin biosynthesis protein RibD [Nitrosococcus watsonii C-113] gi|299539694|gb|ADJ28011.1| riboflavin biosynthesis protein RibD [Nitrosococcus watsonii C-113] Length = 371 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 54/154 (35%), Gaps = 21/154 (13%) Query: 3 KGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ AQ + P VG V V +I+ ++ +HAEI A+R Sbjct: 2 NDRAYMVRALKLAQRGLFTTDPNPRVGCVLVRGGEIVGEGWHQQAGD----SHAEINALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC C A+ A + R+ +P G Sbjct: 58 QAG-----IRAQGSTCYVTLEPCCHRGRTPPCTEALIEAGVARVVAAMGDPHPKVASQGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 A ++ G+ ++ + + F + Sbjct: 113 AQLREAGL----QVEHGLLQEEAEALNVGFVQRL 142 >gi|229123633|ref|ZP_04252828.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus 95/8201] gi|228659768|gb|EEL15413.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus 95/8201] Length = 379 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 55/158 (34%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ VGAV V + I+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAEGTCGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + I R+ + NG Sbjct: 67 MAGDKA-----KGATVYVTLEPCSHFGKTPPCCDLLIKKGITRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 155 >gi|49480339|ref|YP_038170.1| riboflavin biosynthesis protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331895|gb|AAT62541.1| riboflavin biosynthesis protein [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 370 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 55/158 (34%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ VGAV V + I+ + + HAE+ A+ Sbjct: 2 TDQEYMRIALQLAEGTCGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + I R+ + NG Sbjct: 58 MAGDKA-----KGATVYVTLEPCSHFGKTPPCCDLLIKKGITRVVIATLDCNPLVSGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 113 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 146 >gi|210621234|ref|ZP_03292540.1| hypothetical protein CLOHIR_00483 [Clostridium hiranonis DSM 13275] gi|210154845|gb|EEA85851.1| hypothetical protein CLOHIR_00483 [Clostridium hiranonis DSM 13275] Length = 384 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 55/147 (37%), Gaps = 21/147 (14%) Query: 6 VFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ALE A+ N P VGAV V N KII ++ HAE A+ Sbjct: 23 KYMQLALENAKKGVGFVNPNPMVGAVIVKNGKIIGEGYHKKYGGL----HAERNALNN-- 76 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 E + +YVTLEPC C AI +I+++ + +P Sbjct: 77 ---CSENPKDATMYVTLEPCCHYGKTPPCTDAIIENKIKKVVIASLDPNPKMSGKSLDIL 133 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 ++ G+ E ++ + F Sbjct: 134 KKRG----IKVEKGLLENEGDKLNETF 156 >gi|153855732|ref|ZP_01996746.1| hypothetical protein DORLON_02764 [Dorea longicatena DSM 13814] gi|149751955|gb|EDM61886.1| hypothetical protein DORLON_02764 [Dorea longicatena DSM 13814] Length = 378 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 54/151 (35%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A++ A+ N P VGAV V + +II ++ HAE AI Sbjct: 2 TDQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGRIIGEGYHKKCGEL----HAERNAI- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E +YVTLEPC C AI +I+++ G+ +P G Sbjct: 57 ----ASLTESAEGATIYVTLEPCCHYGKTPPCTEAIIEQKIKKVVIGSRDPNPKVAGKGA 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 Q + + + + FF Sbjct: 113 QILRESG----ITVVQDFMREECDCLNPVFF 139 >gi|319401074|gb|EFV89293.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis FRI909] Length = 347 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 24/151 (15%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ AQ + + PVG+V V N +I+ + + K HAE+ AI M Sbjct: 4 FMDDAIQLAQMVNGQTGVNPPVGSVVVKNGRIVGLGAHLKKGDK----HAEVQAIEMAGL 59 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +YV+LEPC C I A I ++ Y + + G + Sbjct: 60 NAQ-----GATIYVSLEPCTHHGSTPPCVDKIIEAGISKVIYAVKDTTL--VSKGDEILR 112 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ +E + + +DFF +R Sbjct: 113 EAG----IEVEFQYNEN-AATLYRDFFTAKR 138 >gi|229093172|ref|ZP_04224290.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock3-42] gi|228690146|gb|EEL43940.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock3-42] Length = 379 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 55/158 (34%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ VGAV V + I+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAEGTCGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + I R+ + NG Sbjct: 67 MAGDKA-----KGATVYVTLEPCSHFGKTPPCCDLLIKKGITRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 155 >gi|218888179|ref|YP_002437500.1| riboflavin biosynthesis protein RibD [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759133|gb|ACL10032.1| riboflavin biosynthesis protein RibD [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 419 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 19/148 (12%) Query: 5 NVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +FM A+ A+ P VGAV V + ++++R + HAE+ +R Sbjct: 8 EIFMREAIALARRGRWRAAPNPTVGAVLVRDGQVVARGYH----TACGMPHAEVECLRDA 63 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L VTLEPC C+ A+ A IR + G ++P G +F Sbjct: 64 AANGVDP--AACTLMVTLEPCNHHGKTPPCSQAVLAAGIRHVVVGMADPNPVARG-GAEF 120 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 H + G+ EQ R ++ DF Sbjct: 121 LRQ----HGVRVDMGVCEQDCRDLVADF 144 >gi|119474644|ref|ZP_01614997.1| riboflavin-specific deaminase/reductase [marine gamma proteobacterium HTCC2143] gi|119450847|gb|EAW32080.1| riboflavin-specific deaminase/reductase [marine gamma proteobacterium HTCC2143] Length = 370 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 58/153 (37%), Gaps = 22/153 (14%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A++ A+ VG + V N +II R + AHAE+ AI Sbjct: 2 NDADYMQLAIDLAEKGLYTASPNPRVGCIIVRNGQIIGRGYHVRTGQ----AHAEVNAIA 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + + +YVTLEPC C+ A+ A + R+ ++P +G Sbjct: 58 DAGNV------EDATVYVTLEPCSHTGRTPPCSDALITANVARVVVAMADPNPLVAGSGI 111 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ ++RQ+ + K Sbjct: 112 AKLEQAG----IVVELGLLASQARQLNPGYIKR 140 >gi|307564973|ref|ZP_07627490.1| riboflavin biosynthesis protein RibD [Prevotella amnii CRIS 21A-A] gi|307346286|gb|EFN91606.1| riboflavin biosynthesis protein RibD [Prevotella amnii CRIS 21A-A] Length = 313 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 57/150 (38%), Gaps = 18/150 (12%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++M L+ A+N + VGAV V N +II + + HAE+ A Sbjct: 7 DEMYMRRCLQLAKNGMLLAKPNPMVGAVIVSDNGRIIGEGYHICYGKE----HAEVNAF- 61 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 R + +L + +YV LEPC CA I + R+ G +P G Sbjct: 62 ASVRKKDEHLLSKSTIYVNLEPCSHFGKTPPCADLIIKKGVGRVVCGCIDPFSVVSGRGV 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 Q A + G+ E+ + + F Sbjct: 122 QRIREAGIP----VSVGVLERECLALNKRF 147 >gi|302384487|ref|YP_003820309.1| CMP/dCMP deaminase zinc-binding protein [Clostridium saccharolyticum WM1] gi|302195115|gb|ADL02686.1| CMP/dCMP deaminase zinc-binding protein [Clostridium saccharolyticum WM1] Length = 161 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 2/99 (2%) Query: 9 SCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 CA E ++ + P GA+ + I+ N T HAE ++ S Sbjct: 12 RCA-EISRQSREAGNTPFGALLAGKDGSILLEQPNIEITEGKCTGHAETQVAERASQLYS 70 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 ++ L + LY T EPC MCA AI A I R+ YG S Sbjct: 71 KDFLSDCTLYTTAEPCAMCAGAIYWAGIGRVVYGMSEKD 109 >gi|229198234|ref|ZP_04324942.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus m1293] gi|228585253|gb|EEK43363.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus m1293] Length = 373 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 62/162 (38%), Gaps = 26/162 (16%) Query: 1 MKK--GNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 MKK +M AL+ A+ + + P VGAV V + I+ + + HAE+ Sbjct: 1 MKKMTDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+ M +YVTLEPC C + ++R+ + Sbjct: 57 HALHMAGDKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKEVKRVVIATLDCNPLVS 111 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 NG + A E+ G+ E + + + FF K +R Sbjct: 112 GNGKKRLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 149 >gi|225181336|ref|ZP_03734780.1| riboflavin biosynthesis protein RibD [Dethiobacter alkaliphilus AHT 1] gi|225167917|gb|EEG76724.1| riboflavin biosynthesis protein RibD [Dethiobacter alkaliphilus AHT 1] Length = 367 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 25/154 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M +M AL+ A A + VGAV V + + + ++ HAEI Sbjct: 1 MDADERYMWLALDLA--AQGQGTTSPNPMVGAVLVKDGETVGTGYHQKAGG----PHAEI 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 +A+ LYVTLEPC C I A +R++ +P Sbjct: 55 IALEEAGEAA-----RGATLYVTLEPCSHTGKTPPCVDRIIAAGVRKVVVAMQDPNELVN 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A ++ G+ E+++ ++ + F Sbjct: 110 GLGLKKLQEAG----IKVKSGVLEEKALRLNEVF 139 >gi|304570589|ref|YP_388926.2| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 373 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 57/155 (36%), Gaps = 22/155 (14%) Query: 1 MKKGN---VFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55 M + FM A+ A+ + P VGAV V + + ++R + HAE Sbjct: 1 MSHDHPFSSFMLEAVALAEKGRWATSPNPCVGAVLVKDGQTVARGWHTAYGK----PHAE 56 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109 I +R R E L VTLEPC C+ A+ A IR + G +P Sbjct: 57 IECLRDAARRGVNP--AECTLVVTLEPCNHTGKTPPCSIAVLQAGIRHVVVGMMDPNPVA 114 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G F + G+ Q ++ DF Sbjct: 115 QG-GANFLRENG----VTVETGVCRQECEDVVDDF 144 >gi|285019600|ref|YP_003377311.1| riboflavin biosynthesis RibD oxidoreductase [Xanthomonas albilineans GPE PC73] gi|283474818|emb|CBA17317.1| probable riboflavin biosynthesis ribd oxidoreductase protein [Xanthomonas albilineans] Length = 369 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M+ AL A+ A P VG V V +++ + ++ HAE+ A+R Sbjct: 8 DHRWMAQALRLAERGAYTTRPNPMVGCVIVRDDEQVGEGFHQRAGG----PHAEVFALRA 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ ++P G Sbjct: 64 AG-----EYARGATAYVTLEPCAHYGRTPPCALALIEAGVARVVVAMADPFPQVNGGGFA 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + G+ E+++R + + F Sbjct: 119 LLREAG----IAVQSGLMEEQARALNRGF 143 >gi|322434629|ref|YP_004216841.1| riboflavin biosynthesis protein RibD [Acidobacterium sp. MP5ACTX9] gi|321162356|gb|ADW68061.1| riboflavin biosynthesis protein RibD [Acidobacterium sp. MP5ACTX9] Length = 373 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 57/152 (37%), Gaps = 18/152 (11%) Query: 1 MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + FM ALE A+ A VG V V + KII+ + HAEI A Sbjct: 1 MSQDQQFMQRALELAESTTALASPNPQVGCVFVRDGKIIAEGFHLYEARD----HAEIAA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 ++ + + YVTLEPC+ CA + A I R + N Sbjct: 57 LKQA--EANGIDVAGDTAYVTLEPCSHHGRTGPCADVLIAAGISRCVIATLDANPVVRGN 114 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A + G+ EQ++R + F Sbjct: 115 GVAKLEAAG----IAVTVGVLEQKARTLNDAF 142 >gi|194367233|ref|YP_002029843.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia R551-3] gi|194350037|gb|ACF53160.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia R551-3] Length = 150 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 + A+ EA+ +P+GA + +++ NR + D + H E A R Sbjct: 6 DYQALLQTAIAEARQGLAEGGVPIGAALYHNDGRLLGCGHNRRVQESDPSVHGETDAFRK 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFY 117 R Q + + TL PC C+ + I + G S GGI ENG + Sbjct: 66 AGR---QRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESRTFQGGIDWLRENGVKVI 122 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 L + Q ++ F + Sbjct: 123 DLDS-------------QECVDLLGGFIAQH 140 >gi|159903849|ref|YP_001551193.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus str. MIT 9211] gi|159889025|gb|ABX09239.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus str. MIT 9211] Length = 365 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 59/153 (38%), Gaps = 23/153 (15%) Query: 6 VFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMG 62 +M A + AQ A N P VGAV + +K+ I + K + HAE+ A+R Sbjct: 13 YWMQRAFQLAQLADGETNPNPLVGAVVLDPDKLLIGEGFH----SKAGSPHAEVEALRQA 68 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L VTLEPC C I + + R+ G +P NG + Sbjct: 69 GDAA-----KGGTLLVTLEPCCHYGLTPPCTKTIIESGVSRVVVGLQDPDPRVSGNGIRL 123 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF-FKER 148 A E+ GI ++ + F F+ + Sbjct: 124 LKEAG----IEVITGILKEEISFQNRAFIFRIK 152 >gi|332534978|ref|ZP_08410796.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pseudoalteromonas haloplanktis ANT/505] gi|332035596|gb|EGI72088.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pseudoalteromonas haloplanktis ANT/505] Length = 377 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 23/155 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + ++M+ A+E A+ P VG V V NN+II ++ HAE+ A Sbjct: 9 EHDEMYMARAIELAKKGRFTT-TPNPNVGCVLVKNNQIIGEGFHQLAGQG----HAEVNA 63 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + + YVTLEPC CA + A + ++ + Sbjct: 64 LAVAGKNAQ-----GATAYVTLEPCSHYGRTPPCAEGLKAAGVVKVIAAMVDTNPQVAGK 118 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G + + A ++ G+ E ++R + FFK Sbjct: 119 GLKILSDAG----IDVAYGLLESQARALNVGFFKR 149 >gi|206976286|ref|ZP_03237194.1| riboflavin biosynthesis protein RibD [Bacillus cereus H3081.97] gi|206745482|gb|EDZ56881.1| riboflavin biosynthesis protein RibD [Bacillus cereus H3081.97] Length = 370 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + P VGAV V + I+ + + HAE+ A+ Sbjct: 2 TDQEYMRIALQLAEGTFGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + ++R+ + NG Sbjct: 58 MAGDKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKEVKRVVIATLDCNPLVSGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E+ + + + FF K +R Sbjct: 113 KRLEEAG----IEVTTGVLEEEAVLLNRYFFHYMKTKR 146 >gi|109897636|ref|YP_660891.1| riboflavin biosynthesis protein RibD [Pseudoalteromonas atlantica T6c] gi|109699917|gb|ABG39837.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pseudoalteromonas atlantica T6c] Length = 372 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 22/153 (14%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ A+ A+ + P VG V I+ + ++ K T HAEI AI Sbjct: 8 DAKMMALAIRLAEKGQYTTSPNPNVGCVITDAQGNIVGQGWHQ----KAGTPHAEIHAIA 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 E YVTLEPC C+ A+ A ++R+ +P +G Sbjct: 64 QAG-----ERTKGATAYVTLEPCNHHGRTGPCSEALLDAGVKRVVAAMVDPNPLVAGSGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 Q + A ++ G+ E ++ + + F K Sbjct: 119 QKLSDAG----VQVSSGLLESEAKALNRGFIKR 147 >gi|290968502|ref|ZP_06560041.1| riboflavin biosynthesis protein RibD [Megasphaera genomosp. type_1 str. 28L] gi|290781498|gb|EFD94087.1| riboflavin biosynthesis protein RibD [Megasphaera genomosp. type_1 str. 28L] Length = 378 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 58/156 (37%), Gaps = 24/156 (15%) Query: 1 MKKGNVFMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M+ +M AL A+ A N + VG V V + +I+ + HAE+L Sbjct: 1 MEAAE-YMKKALALAKIALGYTSPNPV-VGCVIVKDGEIVGTGYHHQAGA----PHAEVL 54 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A++ + +YVTLEPC CA + +I+++ +P Sbjct: 55 ALQEAG-----DRATGATVYVTLEPCAHYGRTPPCARTLVQHKIKKVVIAMLDPNPLVAG 109 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G A + G+ + ++ + F K Sbjct: 110 KGAAILRQAG----IVVEVGLLSAEAVKLNEVFIKN 141 >gi|256421260|ref|YP_003121913.1| riboflavin biosynthesis protein RibD [Chitinophaga pinensis DSM 2588] gi|256036168|gb|ACU59712.1| riboflavin biosynthesis protein RibD [Chitinophaga pinensis DSM 2588] Length = 352 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 24/159 (15%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M L+ A+ A + P VGAV V +II +R AHAE+ + Sbjct: 6 DEFYMQRCLQLAKLGA--GNVAPNPMVGAVLVYEGRIIGEGYHRQYGF----AHAEVNCV 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + Q ++P +YV+LEPC CA I +I + G + G Sbjct: 60 HSV-KPEDQHLIPAATMYVSLEPCAHYGKTPPCAELIVSQQISTVVIGCVDTFSQVAGKG 118 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 A + G+ E +R++ FF +++R Sbjct: 119 IGILKAAG----ITVRTGVLEAAARELNSRFFTFHEQKR 153 >gi|288574956|ref|ZP_06393313.1| riboflavin biosynthesis protein RibD [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570697|gb|EFC92254.1| riboflavin biosynthesis protein RibD [Dethiosulfovibrio peptidovorans DSM 11002] Length = 356 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 51/152 (33%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M AL A VG V + +I+ +R HAE A+ Sbjct: 6 EDVTYMRRALSLAMRGTGYTSPNPMVGCVIARDGEILGEGYHRRCGA----PHAEREALM 61 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ A I R +P G Sbjct: 62 SAVGGV-----AGATAYVTLEPCSHHGKTPPCAPALVEAGIGRCVVATVDPDPRVSGRGI 116 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + A ++ G+ E+ R + + F K Sbjct: 117 EILRSAG----VDVSVGVLEEECRWLNRGFIK 144 >gi|225874950|ref|YP_002756409.1| riboflavin biosynthesis protein RibD [Acidobacterium capsulatum ATCC 51196] gi|225792610|gb|ACO32700.1| riboflavin biosynthesis protein RibD [Acidobacterium capsulatum ATCC 51196] Length = 380 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 54/151 (35%), Gaps = 21/151 (13%) Query: 2 KKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M AL A+ A VG V V ++ + KD HAEI+A+ Sbjct: 13 NEDQRWMQRALALARLSKAVSSPNPAVGCVLVREGALVGEGYHD-YSRKD---HAEIVAL 68 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 + + YVTLEPC C A+ A +RR+ +P G Sbjct: 69 KQAG-----DQARGATAYVTLEPCCHTGRTGPCTEALIAAGVRRVVAATVDPNPKVSGQG 123 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E GI E +R + F Sbjct: 124 LERLRQAG----IETTAGIGESEARALNDAF 150 >gi|108800567|ref|YP_640764.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium sp. MCS] gi|119869706|ref|YP_939658.1| CMP/dCMP deaminase, zinc-binding [Mycobacterium sp. KMS] gi|126436183|ref|YP_001071874.1| CMP/dCMP deaminase, zinc-binding [Mycobacterium sp. JLS] gi|108770986|gb|ABG09708.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium sp. MCS] gi|119695795|gb|ABL92868.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium sp. KMS] gi|126235983|gb|ABN99383.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium sp. JLS] Length = 154 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 50/138 (36%), Gaps = 13/138 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A EA+ IP+GA ++ NR + D + HAE A R R Sbjct: 15 LDVAYAEARKGLSEGGIPIGAALFSAGGTLLGSGHNRRVQDDDPSVHAETDAFRNAGR-- 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 Q + TL PC C+ + I + G S GG E + H Sbjct: 73 -QRDYRSTVMVTTLSPCWYCSGLVRQFNIGAVIVGESRTFTGGHEWLAE--------HGV 123 Query: 127 EIYPGISEQRSRQIIQDF 144 E+ + + R ++ +F Sbjct: 124 EVTV-LDDDRCVSMMTEF 140 >gi|228934673|ref|ZP_04097506.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228824925|gb|EEM70724.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 360 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 43/146 (29%), Positives = 63/146 (43%), Gaps = 23/146 (15%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M ALE A A P VG+V V +N+I+ + HAEI AIRM Sbjct: 1 MKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGE----PHAEIHAIRMAG- 54 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 E +YVTLEPC+ CA AI A I+++ +P G + Sbjct: 55 ----EQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQ 110 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E++S+++ + F Sbjct: 111 DAG----IEVLVGVCEEKSKKMNEVF 132 >gi|21241517|ref|NP_641099.1| 5-amino-6-uracil reductase [Xanthomonas axonopodis pv. citri str. 306] gi|21106864|gb|AAM35635.1| riboflavin-specific deaminase [Xanthomonas axonopodis pv. citri str. 306] Length = 369 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL A+ A P VG V V + + ++ HAE+ A+R Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGG----PHAEVFALR 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ A +RR+ ++P G Sbjct: 67 AAGELA-----RGATAYVTLEPCAHYGRTPPCALALIEAGVRRVVAAMADPFPQVNGGGF 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ + ++R + + F Sbjct: 122 ALLREAG----IEVLSGVMQAQARTLNRGF 147 >gi|253998546|ref|YP_003050609.1| riboflavin biosynthesis protein RibD [Methylovorus sp. SIP3-4] gi|253985225|gb|ACT50082.1| riboflavin biosynthesis protein RibD [Methylovorus sp. SIP3-4] Length = 368 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 58/157 (36%), Gaps = 25/157 (15%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M+ AL A+ P VG V V + +I+ + HAE+ A+R Sbjct: 6 DHQMMARALRLAEQGLYTT-TPNPRVGCVIVKDGQIVGEGAHLKAGE----PHAEVHALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + D YVTLEPC CA A+ A ++R+ +P +G Sbjct: 61 QAGNLAQ-----GADAYVTLEPCSHHGRTPPCADALIKAGVKRVVAAMQDPNPQVAGSGL 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE--RR 149 Q + G+ E ++R + F RR Sbjct: 116 QRLQAQG----IAVQSGLLEAQARSLNAGFISRMTRR 148 >gi|58259071|ref|XP_566948.1| cytosine deaminase [Cryptococcus neoformans var. neoformans JEC21] gi|57223085|gb|AAW41129.1| cytosine deaminase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 165 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 12/145 (8%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAI 59 + FMS A E+A + IP+GA V ++IISR N +L H E+ + Sbjct: 12 EDYPHFMSVAHEQALKSLSEGGIPIGAALVHLPTSRIISRGHNNRVQLSSNVRHGEMDCL 71 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R+ +L E ++ TL PC MC+A L +IR + + GG Q Sbjct: 72 ENLGRVPEG-LLSECAMFTTLSPCIMCSATCILYKIRTVVLAENENFLGG----EQLLRD 126 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 + + + + +++++ Sbjct: 127 NGAN-----VINLDSEEIKNMMKNW 146 >gi|325922230|ref|ZP_08184016.1| cytosine/adenosine deaminase [Xanthomonas gardneri ATCC 19865] gi|325547300|gb|EGD18368.1| cytosine/adenosine deaminase [Xanthomonas gardneri ATCC 19865] Length = 151 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 13/135 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A+ EA+ IP+GA + +++ NR + D + H E A R R Sbjct: 11 LDTAIAEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR-- 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 Q + + TL PC C+ + I + G S GG+ + H Sbjct: 69 -QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGVSWLRE--------HGV 119 Query: 127 EIYPGISEQRSRQII 141 + + Q ++ Sbjct: 120 NVID-LQSQECIDLL 133 >gi|219129188|ref|XP_002184777.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217403886|gb|EEC43836.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 564 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 15/153 (9%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-------RELKDVTAHA 54 + M A+ EA A ++P GAV +++ I++RA N+ DVT HA Sbjct: 7 RDDEACMREAIAEAAAATSEGKMPFGAVLAIDSVIVARAHNQCPAAAKRGGGTGDVTRHA 66 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE--N 112 E+ +R+ L+ E LY + EPC MCA AI + + ++ YG S + + Sbjct: 67 EMELVRLFTSKLTAEERSNAVLYTSTEPCVMCAGAIYWSGVSKVVYGCSARQLEALSGPG 126 Query: 113 GTQFYTLATCH------HSPEIYPGISEQRSRQ 139 G E + + S Q Sbjct: 127 GFDIPVDTLYGMASKGARRMECLGPLLAEESLQ 159 >gi|313109499|ref|ZP_07795455.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa 39016] gi|310881957|gb|EFQ40551.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa 39016] Length = 373 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++M+ ALE A+ VG V V + +++ + HAE+ A+R Sbjct: 5 DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGE----PHAEVHALRQ 60 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ +P G Sbjct: 61 AG-----ENARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVGGRGLL 115 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E +R++ F K Sbjct: 116 RLMQAG----IAVQSGVLEAEARELNIGFIKR 143 >gi|229168856|ref|ZP_04296574.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH621] gi|228614586|gb|EEK71693.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH621] Length = 379 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 61/158 (38%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ AQ + + P VGAV V + KI+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAQGTSGQTSPNPMVGAVVVKDGKIVGMGAHMRAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M E + +YVTLEPC C + ++R+ + NG Sbjct: 67 MAG-----ERAKDATVYVTLEPCSHFGKTPPCCELLIEKGVQRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + E+ G+ + + + + FF K +R Sbjct: 122 RRLEEVG----IEVTTGVLDAEATLLNRYFFHYMKTKR 155 >gi|228916750|ref|ZP_04080315.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228842937|gb|EEM88020.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 379 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 55/158 (34%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ VGAV V + I+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAEGTCGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + I R+ + NG Sbjct: 67 MAGDKA-----KGATVYVTLEPCSHFGKTPPCCDLLIKKGITRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 155 >gi|321249831|ref|XP_003191590.1| cytosine deaminase [Cryptococcus gattii WM276] gi|317458057|gb|ADV19803.1| Cytosine deaminase, putative [Cryptococcus gattii WM276] Length = 165 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 20/149 (13%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAI 59 + FMS A ++A + IP+GA V ++IISR N +L H E+ + Sbjct: 12 EDYPHFMSVAHDQALKSRSEGGIPIGAALVHLPTSRIISRGHNNRVQLSSNVRHGEMDCL 71 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQ 115 R+ +L E ++ TL PC MC+A L +I + + GG ++NG Sbjct: 72 ENLGRVPEG-LLRECAMFTTLSPCIMCSATCILYKIPTVVLAENENFLGGEQLLVDNGVN 130 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 L + +++++D+ Sbjct: 131 VINLDS-------------DEIKKMMKDW 146 >gi|229075817|ref|ZP_04208794.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock4-18] gi|228707369|gb|EEL59565.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock4-18] Length = 379 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAKGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + ++R+ + NG Sbjct: 67 MAGEKAKN-----ATVYVTLEPCSHFGKTPPCCELLIEKGVKRIVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 KKLEEAG----IEVTTGVLETEAVLLNRYFFHYMKTKR 155 >gi|94677040|ref|YP_589028.1| riboflavin biosynthesis protein RibD [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94220190|gb|ABF14349.1| riboflavin biosynthesis protein RibD [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 378 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 MK +++ A + A+ P VG V + +++++ + HAEI A Sbjct: 1 MKSDEFYLALAFKLARRGKLTTAPNPNVGCVIIRDHRVVGEGYHVRAGE----PHAEIHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM + Y+TLEPC C A+ A I R+ +P Sbjct: 57 LRMAGAMAY-----GATAYITLEPCNHYGHTPPCTEALIAAGISRVVAAMLDPNPKVNGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G Y L + E+ I Q + I + F K R Sbjct: 112 G--LYRLQQAN--IEVRHSIMLQDAEMINKGFLKRMR 144 >gi|331703065|ref|YP_004399752.1| cytosine deaminase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801620|emb|CBW53773.1| Cytosine deaminase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 147 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 4/150 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59 M N + + +++ A N+IPV + NN I++ + N + K+++ HAEI AI Sbjct: 1 MNDFNNILDLMIYQSKKAIKHNDIPVCCCIIDNNNNILTISINTRYKNKNISQHAEINAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L+ L E L TLEPC MC +AI +I +YY + K G I+N Sbjct: 61 NKLINKLNTFNLSEYKLITTLEPCMMCYSAIKQVKINTIYYLVDSYKFG-IQNNYSI-ND 118 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +I + +++ DFF +R Sbjct: 119 QNLN-LIQIKNHNKQSEYIKLLNDFFINKR 147 >gi|313200621|ref|YP_004039279.1| riboflavin biosynthesis protein ribd [Methylovorus sp. MP688] gi|312439937|gb|ADQ84043.1| riboflavin biosynthesis protein RibD [Methylovorus sp. MP688] Length = 368 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 58/157 (36%), Gaps = 25/157 (15%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M+ AL A+ P VG V V + +I+ + HAE+ A+R Sbjct: 6 DHQMMARALRLAEQGLYTT-TPNPRVGCVIVKDGQIVGEGAHLKAGE----PHAEVHALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + D YVTLEPC CA A+ A ++R+ +P +G Sbjct: 61 QAGDLAQ-----GADAYVTLEPCSHHGRTPPCADALIKAGVKRVVAAMQDPNPQVAGSGL 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE--RR 149 Q + G+ E ++R + F RR Sbjct: 116 QRLQAQG----IAVQSGLLEAQARSLNAGFISRMTRR 148 >gi|33323001|gb|AAQ07237.1|AF496545_1 hypothetical protein [Lactobacillus delbrueckii subsp. lactis] Length = 89 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 47/73 (64%) Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136 +VTLEPC MCA AI +RI+ +Y+ A +PK G + +++ +H PE+ G+ +++ Sbjct: 1 FVTLEPCAMCAGAIINSRIKEVYFAAMDPKAGAAGSVVDLFSVEKFNHHPEVIRGLYKEQ 60 Query: 137 SRQIIQDFFKERR 149 +++DFF+E R Sbjct: 61 GALLLKDFFREIR 73 >gi|254823485|ref|ZP_05228486.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium intracellulare ATCC 13950] Length = 143 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 13/142 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A EEA++ IP+GA + ++ R NR + D + HAE+ A R R Sbjct: 2 LDVAFEEARSGLAEGGIPIGAALFTADGVLLGRGRNRRVQQGDPSLHAEVDAFRAAGR-- 59 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 Q + TL PC C+ + I L G S GG E Q H Sbjct: 60 -QRDYRSTVMVTTLSPCWYCSGLVRQFNIGALVVGESRTFTGGHEWLAQ--------HGV 110 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 + + + R Q++ F E Sbjct: 111 TVTV-VDDPRCTQMMSAFIAEH 131 >gi|302390233|ref|YP_003826054.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase ;5-amino-6-(5-phosphoribosylamino)uracil reductase [Thermosediminibacter oceani DSM 16646] gi|302200861|gb|ADL08431.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase ;5-amino-6-(5-phosphoribosylamino)uracil reductase [Thermosediminibacter oceani DSM 16646] Length = 373 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 17/130 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ FM AL+ A+ P VGAV V + +I+ +R HAE+ A Sbjct: 1 MERDVFFMRRALDLAKKGRGTTSPNPMVGAVVVKDGEIVGEGYHRKAGE----PHAEVEA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + E +LYV LEPC CA I A ++R+ ++P Sbjct: 57 LAQAA-----ERARGAELYVNLEPCCHYGRTPPCADTIIRAGVKRVVAAMADPNPLVAGK 111 Query: 113 GTQFYTLATC 122 G + A Sbjct: 112 GIKRLKEAGI 121 >gi|223043509|ref|ZP_03613554.1| riboflavin biosynthesis protein RibD [Staphylococcus capitis SK14] gi|222442997|gb|EEE49097.1| riboflavin biosynthesis protein RibD [Staphylococcus capitis SK14] Length = 349 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 24/151 (15%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM+ A++ A+ + I PVG+V V + +I+ + + K HAE+ A+ M Sbjct: 4 FMNYAIQLAKMVDGQTGINPPVGSVVVKDGRIVGLGAHLKKGDK----HAEVQALDMAG- 58 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 E + +YV+LEPC C I IR++ Y + G + Sbjct: 59 ----EDAKDATIYVSLEPCTHHGSTPPCVNKIIEFGIRKVIYAVKDTTL--ASKGDEILK 112 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ +E + ++ +DFF +R Sbjct: 113 EAG----IEVEFQFNEN-AAELYKDFFTAKR 138 >gi|296455801|gb|ADH22036.1| cytosine deaminase [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 155 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 4/150 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 M N + + +++ A N+IPV + NN I+S + N + K+++ HAEI AI Sbjct: 9 MNDFNNILDLMIYQSKKAIKHNDIPVCCCIIDSNNNILSMSINTRYKNKNISQHAEINAI 68 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L+ L E L TLEPC MC +AI +I +YY + K G I+N Sbjct: 69 NKLINKLNTFNLSEYKLITTLEPCMMCYSAIKQVKINTIYYLVDSYKFG-IQNNYSI-ND 126 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +I + +++ +FF +R Sbjct: 127 QNLN-LIQIKNHNKQSEYIKLLNNFFINKR 155 >gi|256383711|gb|ACU78281.1| cytosine deaminase [Mycoplasma mycoides subsp. capri str. GM12] gi|256384542|gb|ACU79111.1| cytosine deaminase [Mycoplasma mycoides subsp. capri str. GM12] Length = 147 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 4/150 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 M N + + +++ A N+IPV + NN I+S + N + K+++ HAEI AI Sbjct: 1 MNDFNNILDLMIYQSKKAIKHNDIPVCCCIIDSNNNILSMSINTRYKNKNISQHAEINAI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L+ L E L TLEPC MC +AI +I +YY + K G I+N Sbjct: 61 NKLINKLNTFNLSEYKLITTLEPCMMCYSAIKQVKINTIYYLVDSYKFG-IQNNYSI-ND 118 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +I + +++ +FF +R Sbjct: 119 QNLN-LIQIKNHNKQSEYIKLLNNFFINKR 147 >gi|324328017|gb|ADY23277.1| riboflavin biosynthesis protein RibD [Bacillus thuringiensis serovar finitimus YBT-020] Length = 370 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A+ Sbjct: 2 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C ++ ++R+ + NG Sbjct: 58 MAGEKA-----KGATVYVTLEPCSHFGKTPPCCESLIKKEVKRVVIATLDCNPLVSGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 113 RRLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 146 >gi|134107133|ref|XP_777879.1| hypothetical protein CNBA5760 [Cryptococcus neoformans var. neoformans B-3501A] gi|50260577|gb|EAL23232.1| hypothetical protein CNBA5760 [Cryptococcus neoformans var. neoformans B-3501A] Length = 165 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 12/145 (8%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAI 59 + FMS A E+A + IP+GA V ++IISR N +L H E+ + Sbjct: 12 EDYPHFMSVAHEQALKSLSEGGIPIGAALVHLPTSRIISRGHNNRVQLSSNVRHGEMDCL 71 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R+ +L E ++ TL PC MC+A L +IR + + GG Q Sbjct: 72 ENLGRVPEG-LLSECAMFTTLSPCIMCSATCILYKIRTVVLAENENFVGG----EQLLRD 126 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 + + + + +++++ Sbjct: 127 NGAN-----VINLDSEEIKNMMKNW 146 >gi|145298017|ref|YP_001140858.1| pyrimidine deaminase/reductase RibD [Aeromonas salmonicida subsp. salmonicida A449] gi|142850789|gb|ABO89110.1| pyrimidine deaminase/reductase RibD [Aeromonas salmonicida subsp. salmonicida A449] Length = 369 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 55/156 (35%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M+ ALE A+ P VGAV V ++ ++ HAEI A+ Sbjct: 4 QDDYQWMNRALELARRGRYTTAPNPCVGAVLVKAGVVVGEGWHKRAGE----PHAEIYAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + YVTLEPC CA A+ A + R+ +P G Sbjct: 60 HEAG-----DEARGATAYVTLEPCSHHGRTPPCAEALIKAGVTRVVAAMVDPNPEVGGRG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + A G+ + + FFK R Sbjct: 115 LRMLSEAGIKTDF----GLLSSEAEALNPGFFKRMR 146 >gi|171463092|ref|YP_001797205.1| riboflavin biosynthesis protein RibD [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192630|gb|ACB43591.1| riboflavin biosynthesis protein RibD [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 372 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 43/149 (28%), Positives = 61/149 (40%), Gaps = 18/149 (12%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FMS AL EAQ A L N P VG V KII R + AHAE+ A+ Sbjct: 6 DHQFMSEALSEAQKALYLSNPNPRVGCVIAKEGKIIGRGFTQAAGK----AHAEVQALAD 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + +YVTLEPC C A+ A+ ++ S+P G + Sbjct: 62 AKARGN--DATGSTIYVTLEPCSHTGKTPPCVDALIAAKPSKVIVAMSDPNPLVAGQGLE 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 LA E+ G+ E ++ + + F Sbjct: 120 KLKLAG----IEVQYGLMESEAQLLNRGF 144 >gi|294930369|ref|XP_002779543.1| cytidine deaminase, putative [Perkinsus marinus ATCC 50983] gi|239888855|gb|EER11338.1| cytidine deaminase, putative [Perkinsus marinus ATCC 50983] Length = 111 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 1/94 (1%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL AQ A +E+PVG V N +++ AGN ++ T HAE++A Sbjct: 18 DDKRFMRVALAAAQEAYDTDEVPVGCAFVSNGVVLATAGNETNHTRNATRHAELVATDKI 77 Query: 63 CRILSQEI-LPEVDLYVTLEPCTMCAAAISLARI 95 + LYVT+EPC MCAAA+ + I Sbjct: 78 YDKYKSCDAIRHSTLYVTVEPCVMCAAALHILGI 111 >gi|194333661|ref|YP_002015521.1| riboflavin biosynthesis protein RibD [Prosthecochloris aestuarii DSM 271] gi|194311479|gb|ACF45874.1| riboflavin biosynthesis protein RibD [Prosthecochloris aestuarii DSM 271] Length = 373 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 19/152 (12%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M LE A+ A L + P VG+V V+ ++++ + HAE+ A+ Sbjct: 10 RDEYYMHRCLELARKGAGLVSPNPMVGSVIVVEDRVVGEGFHERYGG----PHAEVNAL- 64 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +LP LYV LEPC C+ I +IRR+ G +P G Sbjct: 65 --ASVSDASLLPSSTLYVNLEPCSHYGKTPPCSDLIISKKIRRVVVGCLDPHEKVAGKGI 122 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + A E+ G+ ++ S + + F K Sbjct: 123 EKLRQAG----VEVTIGVLQRESEALNEAFIK 150 >gi|159029666|emb|CAO87744.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 386 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 42/149 (28%), Positives = 54/149 (36%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M L A+ A R P VG+V V II + HAE+LA+R Sbjct: 29 DRKMMQRCLTLARQALGRTSPNPLVGSVIVQEGIIIGEGFH----PGAGQPHAEVLALRQ 84 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 LYV LEPC C+ AI A I+++ G +P G Q Sbjct: 85 AAEKA-----RGATLYVNLEPCNHYGRTPPCSEAIVRAGIKKVVVGMIDPNPLVAGKGIQ 139 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E G+ E RQ+ Q F Sbjct: 140 RLASAG----IETLVGVEESECRQVNQGF 164 >gi|21230168|ref|NP_636085.1| riboflavin-specific deaminase/5-amino-6-uracil reductase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769842|ref|YP_244604.1| riboflavin-specific deaminase/5-amino-6-uracil reductase [Xanthomonas campestris pv. campestris str. 8004] gi|188993059|ref|YP_001905069.1| Riboflavin biosynthesis protein RibD (Diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-[5-phosphoribosylamino]uracil reductase) [Xanthomonas campestris pv. campestris str. B100] gi|21111703|gb|AAM40009.1| riboflavin-specific deaminase/5-amino-6-uracil reductase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575174|gb|AAY50584.1| riboflavin-specific deaminase/5-amino-6-uracil reductase [Xanthomonas campestris pv. campestris str. 8004] gi|167734819|emb|CAP53029.1| Riboflavin biosynthesis protein RibD (Diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-[5-phosphoribosylamino]uracil reductase) [Xanthomonas campestris pv. campestris] Length = 364 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 58/150 (38%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL A+ A P VG V V + + ++ HAE+ A+R Sbjct: 6 DNHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGACVGEGFHQRAGG----PHAEVFALR 61 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E YVTLEPC CA A+ A + R+ ++P G Sbjct: 62 AAG-----EQARGATAYVTLEPCAHYGRTPPCALALIAAGVTRVVAAMADPFPQVNGGGF 116 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A +++ G+ E ++R + Q F Sbjct: 117 TLLRDAG----IQVHSGVMEAQARALNQGF 142 >gi|229098580|ref|ZP_04229521.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock3-29] gi|228684902|gb|EEL38839.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock3-29] Length = 379 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAKGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + ++R+ + NG Sbjct: 67 MAGEKAKN-----ATVYVTLEPCSHFGKTPPCCELLIEKGVKRIVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 KKLEEAG----IEVTTGVLETEAVLLNRYFFHYMKTKR 155 >gi|312898694|ref|ZP_07758084.1| riboflavin biosynthesis protein RibD [Megasphaera micronuciformis F0359] gi|310620613|gb|EFQ04183.1| riboflavin biosynthesis protein RibD [Megasphaera micronuciformis F0359] Length = 371 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 57/148 (38%), Gaps = 21/148 (14%) Query: 8 MSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A+ P VG V V + +I+ R + + T HAE+ A+R Sbjct: 1 MEEALNLARMGLGYTSPNPTVGCVIVKDGEIVGRGYHH----QAGTPHAEVWALREA--- 53 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +E +YVTLEPC CA A+ A + ++ +P G Sbjct: 54 --KEKAKGATVYVTLEPCAHYGKTPPCARALVKAGVAKVVCAMLDPNPLVAGKGAAILRN 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ + + ++ + F K Sbjct: 112 AGIP----VIVGLMSKEAVKMNEVFIKN 135 >gi|297569249|ref|YP_003690593.1| riboflavin biosynthesis protein RibD [Desulfurivibrio alkaliphilus AHT2] gi|296925164|gb|ADH85974.1| riboflavin biosynthesis protein RibD [Desulfurivibrio alkaliphilus AHT2] Length = 368 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 38/146 (26%), Positives = 57/146 (39%), Gaps = 22/146 (15%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M ALE A+ + P VGAV V + +++ R +R HAEI Sbjct: 5 TDQAYMKMALELARKGVGKTSPNPCVGAVLVKDGQVVGRGWHRRAGE----PHAEIN--- 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + ++ +YVTLEPC C+ AI A IRR+ YG S+P Sbjct: 58 --ALAAAGDLAGGATIYVTLEPCNHQGRTPPCSKAIEAAGIRRVVYGMSDPNP-----VA 110 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQI 140 E+ G+ R++ Sbjct: 111 GGGGAYLAGRGLEVLAGVLADDCRRL 136 >gi|83955709|ref|ZP_00964289.1| riboflavin biosynthesis protein RibD [Sulfitobacter sp. NAS-14.1] gi|83840003|gb|EAP79179.1| riboflavin biosynthesis protein RibD [Sulfitobacter sp. NAS-14.1] Length = 367 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 53/155 (34%), Gaps = 25/155 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M FM+ AL + + + P VG V V +I+ R + HAE Sbjct: 1 MSDDARFMALALSLGRRG--QGAVWPNPAVGCVIVQQGRIVGRGWTQPGGR----PHAEP 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+R +YVTLEPC CA A+ A+ R+ ++ Sbjct: 55 QALRQAGPAAQ-----GATVYVTLEPCAHTGKTPPCADALVAAKPARVVIACTDRDPRVS 109 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G A + G+ E +R FF Sbjct: 110 GKGIAILRAAG----IIVDVGVLEDEARADHLGFF 140 >gi|298488889|ref|ZP_07006913.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156564|gb|EFH97660.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 366 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 55/148 (37%), Gaps = 21/148 (14%) Query: 8 MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ ALE A+N VG V V + +I+ + HAE+ A+R + Sbjct: 1 MARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGE----PHAEVHALRQAGEL 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC CA A+ A + R+ +P G L Sbjct: 57 A-----RGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPDVSGRGL----L 107 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + + G+ E +R + + F K Sbjct: 108 RLMNAGIGVQCGVLESEARALNKGFLKR 135 >gi|90406961|ref|ZP_01215152.1| Putative pyrimidine deaminase/pyrimidine reductase [Psychromonas sp. CNPT3] gi|90312003|gb|EAS40097.1| Putative pyrimidine deaminase/pyrimidine reductase [Psychromonas sp. CNPT3] Length = 381 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 60/151 (39%), Gaps = 21/151 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ +MS ALE A+ P VG V VL++ ++ + HAE+ A+ Sbjct: 8 EQDKEYMSRALELAKKGRFTSAPNPNVGCVIVLDDIVVGTGFHFKAGQG----HAEVYAL 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 M YVTLEPC CA A+ A ++R+ +P G Sbjct: 64 AMAGSKAQS-----STCYVTLEPCSHFGRTPPCALALIKAGVKRVCVAMRDPNPQVAGQG 118 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ E +++Q+ F Sbjct: 119 IKLLQDAG----IEVSVGLLEPQAKQLNLGF 145 >gi|288941195|ref|YP_003443435.1| CMP/dCMP deaminase protein [Allochromatium vinosum DSM 180] gi|288896567|gb|ADC62403.1| CMP/dCMP deaminase zinc-binding protein [Allochromatium vinosum DSM 180] Length = 189 Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 55/149 (36%), Gaps = 12/149 (8%) Query: 8 MSCALEEAQNAALRN-EIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M+ L+ A+ + P A + ++I+ NR AHAE++AI + + Sbjct: 33 MALVLDLARENIRAGADGPFSAAIFERRSGRLIAAGVNRVVSSGCSIAHAEMVAIGIAQQ 92 Query: 65 ILSQEILP-----EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L L L+ + EPC MC AI + I R+ GA + I Sbjct: 93 RLGSFDLRQAVPGGCVLFTSAEPCAMCMGAIPWSGIERVVIGARDSDVRAIGFDEGHKPA 152 Query: 120 ATC----HHSPEIYPGISEQRSRQIIQDF 144 E+ + S QI+ D+ Sbjct: 153 DWIAGYAQRGIEVTRDLLRAESAQILWDY 181 >gi|254466662|ref|ZP_05080073.1| guanine deaminase [Rhodobacterales bacterium Y4I] gi|206687570|gb|EDZ48052.1| guanine deaminase [Rhodobacterales bacterium Y4I] Length = 164 Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 5/113 (4%) Query: 5 NVFMS--CALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M AL EA+ A +P A V + +++ N E D TAHAE+ AIR Sbjct: 12 ERLMQDVVALSEARVA--EGGVPFSAQVVSADGRVLGAGVNTVMEDHDPTAHAEVCAIRD 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 C + L L + EPC +C A A + + Y S + G Sbjct: 70 ACARHGRTNLAGTVLLASGEPCALCYMAALFAGVSEVLYAVSADEAARYGYGY 122 >gi|91087043|ref|XP_974513.1| PREDICTED: similar to cytidine and deoxycytidylate deaminase zinc-binding region [Tribolium castaneum] gi|270010523|gb|EFA06971.1| hypothetical protein TcasGA2_TC009931 [Tribolium castaneum] Length = 317 Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 63/175 (36%), Gaps = 43/175 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILA 58 ++K FM A++ + +R AV V +++ + +E HA ++A Sbjct: 150 LEKHAEFMRIAIDICEITGVRES----AVVVDPVGGTVVAFGFDLTQEY--PVKHAVMVA 203 Query: 59 IRMGCR----------------------------------ILSQEILPEVDLYVTLEPCT 84 I R + +Y T EPC Sbjct: 204 IDEVARTQKGGVWERHQDYEKIQTFVETKYKNLGFGFSNSAEGPYLCTGYSVYCTTEPCI 263 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA A+ +R +R++YG + K G + + + + + +H E + G+ E+ R Sbjct: 264 TCAMALVHSRAKRVFYGVKSAK-GALGSLCKIHVVENLNHHYEAFSGLLEEECRA 317 >gi|28199619|ref|NP_779933.1| riboflavin-specific deaminase [Xylella fastidiosa Temecula1] gi|182682363|ref|YP_001830523.1| riboflavin biosynthesis protein RibD [Xylella fastidiosa M23] gi|28057734|gb|AAO29582.1| riboflavin-specific deaminase [Xylella fastidiosa Temecula1] gi|182632473|gb|ACB93249.1| riboflavin biosynthesis protein RibD [Xylella fastidiosa M23] gi|307578645|gb|ADN62614.1| riboflavin biosynthesis protein RibD [Xylella fastidiosa subsp. fastidiosa GB514] Length = 364 Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M AL A+ A P VG V V + +++ ++ D HAE+ A+ Sbjct: 7 DDHRHMERALCLAERGAYTTRPNPMVGCVIVRDGEVVGEGWHQR--AGDP--HAEVFALC 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ A +RR+ +P G Sbjct: 63 AAG-----DRARGATAYVTLEPCAHSGRTPPCAMALIDAGVRRVVAAMVDPFPLVNGGGV 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + G+ E ++R + + F Sbjct: 118 TLLRAAG----VTVEHGLMEAQARALNRGF 143 >gi|163792387|ref|ZP_02186364.1| hypothetical protein BAL199_16108 [alpha proteobacterium BAL199] gi|159182092|gb|EDP66601.1| hypothetical protein BAL199_16108 [alpha proteobacterium BAL199] Length = 163 Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 52/152 (34%), Gaps = 11/152 (7%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 + ALE A+ A + P G+V V + +++ NR D T H E R Sbjct: 5 TDLKHLRRALELAREALEAGDAPFGSVLVASDGTVLAEDRNRT-GGGDRTRHPEFALARW 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG-------ASNPKGGGIENGT 114 + P +Y + E C MCAAA + R+ Y A G + Sbjct: 64 AAENMKPADRPGATVYTSGEHCPMCAAAHGFVGLGRIVYAGSSGQLVAWRADFGAAPSPV 123 Query: 115 QFYTLATCHHSPEIYPGI--SEQRSRQIIQDF 144 + + + + R++ + + Sbjct: 124 RALPIREVVPGLTVEGPVPELADELREMHRRY 155 >gi|257869314|ref|ZP_05648967.1| riboflavin-specific deaminase [Enterococcus gallinarum EG2] gi|257803478|gb|EEV32300.1| riboflavin-specific deaminase [Enterococcus gallinarum EG2] Length = 359 Score = 103 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 23/149 (15%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M A+ EA + + P VGAV V + +I++ + HAE AI Sbjct: 2 HETYMKRAISEALKG--KGQTFTNPLVGAVIVKDEEIVAVGSHM--AYGQP--HAEKNAI 55 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 S E L + +YVTLEPC C AI + I+++ G +P G Sbjct: 56 DSCS---SPEKLIDSTIYVTLEPCHHYGKQPPCTTAILQSGIKKVVIGQLDPNPLVSGKG 112 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 F + G+ E+ R+I + Sbjct: 113 KAFLESQG----VAVITGVLEKEVREINR 137 >gi|256080812|ref|XP_002576670.1| cytidine/deoxycytidylate deaminase-related [Schistosoma mansoni] gi|238661949|emb|CAZ32907.1| cytidine/deoxycytidylate deaminase-related [Schistosoma mansoni] Length = 89 Score = 103 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 6/89 (6%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR---MGCR 64 M A E A A NE+PVG V N ++I+ N +D T HAE++ IR CR Sbjct: 1 MDIAFELACEALRCNEVPVGCAFVYNGEVIASGRNEVNATRDATQHAEMVTIRRLEQWCR 60 Query: 65 ILSQE---ILPEVDLYVTLEPCTMCAAAI 90 +E IL E DL+VT+EPC MC AA+ Sbjct: 61 NNQKELDKILVECDLFVTVEPCIMCTAAV 89 >gi|94985175|ref|YP_604539.1| CMP/dCMP deaminase, zinc-binding [Deinococcus geothermalis DSM 11300] gi|94555456|gb|ABF45370.1| CMP/dCMP deaminase, zinc-binding protein [Deinococcus geothermalis DSM 11300] Length = 187 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 13/136 (9%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDV-------TAHA 54 ++ AL A+ A PVGAV V ++I+R NR E + AHA Sbjct: 15 THRPYLQEALRLAREAQAAGSAPVGAVLVNAAGEVIARGRNRVGEAQTPEHVGAASVAHA 74 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E+ ++ L LY +LEPC MC A +L + R+ + +P GG Sbjct: 75 EMDVFFSVGKVQDAATL---TLYTSLEPCLMCGGAAALLEVGRVVWATDDPW-GGSGRLI 130 Query: 115 QFYTLATCHHSPEIYP 130 ++ E+ P Sbjct: 131 KWSEHPAM-QDTEVVP 145 >gi|88799403|ref|ZP_01114981.1| hypothetical protein MED297_17393 [Reinekea sp. MED297] gi|88777942|gb|EAR09139.1| hypothetical protein MED297_17393 [Reinekea sp. MED297] Length = 161 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 4/102 (3%) Query: 3 KGNVFMSCA---LEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILA 58 M A + A + + +P A+ V N +II + N+ + D TAHAEI A Sbjct: 6 SDEFLMEYADKVINLAISNVKEDGLPFAAIVVDQNGEIIGKGVNQVAKHLDCTAHAEIQA 65 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 IR L + L V+ EPC +C AI +A I ++ Sbjct: 66 IREASGNEKTVSLKGMILIVSGEPCALCYMAIRMAEIMKVVI 107 >gi|228935432|ref|ZP_04098250.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228824184|gb|EEM69998.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 379 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 56/158 (35%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ VGAV V + I+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAEETCGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + ++R+ + NG Sbjct: 67 MAGDKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKEVKRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 155 >gi|314933920|ref|ZP_07841285.1| riboflavin biosynthesis protein RibD [Staphylococcus caprae C87] gi|313654070|gb|EFS17827.1| riboflavin biosynthesis protein RibD [Staphylococcus caprae C87] Length = 349 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 24/151 (15%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM+ A++ AQ + I PVG+V V + +I+ + + K HAE+ A+ M Sbjct: 4 FMNYAIQLAQMVDGQTGINPPVGSVVVKDGRIVGLGAHLKKGDK----HAEVQALDMAG- 58 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 E + +YV+LEPC C I IR++ Y + G + Sbjct: 59 ----ENAKDATIYVSLEPCTHHGSTPPCVNKIIEFGIRKVIYAVKDTTL--ASKGDEILK 112 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ +E + ++ +DFF +R Sbjct: 113 EAG----IEVEFQFNEN-AAELYKDFFTAKR 138 >gi|224824436|ref|ZP_03697543.1| riboflavin biosynthesis protein RibD [Lutiella nitroferrum 2002] gi|224602929|gb|EEG09105.1| riboflavin biosynthesis protein RibD [Lutiella nitroferrum 2002] Length = 364 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 23/150 (15%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M+ AL A+ P VG V V + +++ + + T HAE+ A+R Sbjct: 7 DHAMMAQALRLAEQGLYTT-TPNPRVGCVVVRDGEVVGEGWH----IAAGTPHAEVHALR 61 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + YVTLEPC CA + A + R+ +P G Sbjct: 62 MAGELA-----RGATAYVTLEPCSHYGRTPPCAKGLIEAGVGRVVAAMQDPYHEVAGRGL 116 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E +R++ + F Sbjct: 117 DMLRAAG----IEVAVGLLEAEARRLNKGF 142 >gi|119025436|ref|YP_909281.1| riboflavin biosynthesis protein RibD [Bifidobacterium adolescentis ATCC 15703] gi|118765020|dbj|BAF39199.1| riboflavin biosynthesis protein RibD [Bifidobacterium adolescentis ATCC 15703] Length = 317 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 57/156 (36%), Gaps = 21/156 (13%) Query: 1 MKKGNVF---MSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55 M+ + M+ ALE A+ A + P VGAV V + ++++ + HAE Sbjct: 39 MEDMLQYRESMAQALELARKGAGWVDPNPLVGAVVVRDGEVLATGYHDRYRG----PHAE 94 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109 +A L + TLEPC C A I I R+ G+ +P Sbjct: 95 RMAFDYADAH--GIDLTGATVIDTLEPCCHVGSQPACTALILAHGIARVVVGSVDPNPIV 152 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A E+ + + I + FF Sbjct: 153 AGKGLRILEEAG----VEVVRDVMREECDAINRHFF 184 >gi|66047689|ref|YP_237530.1| riboflavin biosynthesis protein RibD:riboflavin-specific deaminase, C-terminal [Pseudomonas syringae pv. syringae B728a] gi|63258396|gb|AAY39492.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase, C-terminal [Pseudomonas syringae pv. syringae B728a] Length = 366 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 53/148 (35%), Gaps = 21/148 (14%) Query: 8 MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ ALE A+ VG V V +I+ + HAE+ A+R + Sbjct: 1 MARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGE----PHAEVHALRQAGEL 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC CA A+ A + R+ +P G L Sbjct: 57 A-----RGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGL----L 107 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + + G+ E +R + + F K Sbjct: 108 RLMNAGIGVQCGVLESEARALNKGFLKR 135 >gi|114045649|ref|YP_736199.1| CMP/dCMP deaminase, zinc-binding protein [Shewanella sp. MR-7] gi|113887091|gb|ABI41142.1| CMP/dCMP deaminase, zinc-binding protein [Shewanella sp. MR-7] Length = 157 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 36/89 (40%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Query: 12 LEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 L AQ +P AV V +I++ NR + L D TAHAEI AIRM +L Q Sbjct: 13 LALAQKEVEGTGLPFSAVIVDESGRIVAEGVNRVQALHDCTAHAEIQAIRMATLLLKQVS 72 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLY 99 L + L + EPC C AI LA+I R+ Sbjct: 73 LEGMTLIASGEPCGFCYMAIQLAKISRVI 101 >gi|218437502|ref|YP_002375831.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 7424] gi|218170230|gb|ACK68963.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 7424] Length = 362 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M + A+ AA + P VGAV V + ++I + K HAE+ A++ Sbjct: 6 DREMMQHCINLARQAAGKTSPNPMVGAVIVKDGQVIGEGFH----PKAGQPHAEVFALKQ 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E +Y++LEPC C A+ A++ ++ G +P +G + Sbjct: 62 AA-----EQAKGATIYISLEPCNHYGRTPPCTEALIEAQVNKVVIGMIDPDPRVSGSGVK 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E R++ + F Sbjct: 117 RLQEAG----IEVVVGVEEDACRRLNEGF 141 >gi|229492959|ref|ZP_04386754.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis SK121] gi|229319989|gb|EEN85815.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis SK121] Length = 166 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 6/142 (4%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 ++ AL+ A+ E+P+GAV +++++ RA + R L HA++ A+ L Sbjct: 9 LAVALDVAREGMELGEMPIGAVVFDDDRVLGRAYTQERALGRRVVHADLQALLQADEALG 68 Query: 68 QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + L V LEPC MC A + R+++ +P G E Q + Sbjct: 69 FTRASGELTLAVNLEPCLMCMGAAITLGVTRVWFALESPNDGAAE-LVQLWAPPVELPFF 127 Query: 127 ----EIYPGISEQRSRQIIQDF 144 E+ GI +R + ++ Sbjct: 128 CKPREVLGGIRRDEARNLFAEY 149 >gi|209517119|ref|ZP_03265966.1| riboflavin biosynthesis protein RibD [Burkholderia sp. H160] gi|209502512|gb|EEA02521.1| riboflavin biosynthesis protein RibD [Burkholderia sp. H160] Length = 383 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + V M AL A+ + P VG V V N ++I + HAEI A+ Sbjct: 4 QTDFVHMERALALAKRGMYTTDPNPRVGCVLVRNGEVIGEGYTQPAGQD----HAEIRAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + L YVTLEPC CA A+ A+I R+ +P G Sbjct: 60 KDA--RSRGHDLRGATAYVTLEPCSHFGRTPPCANALIEAQIGRVIAAMEDPNPQVSGRG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ +R++ F Sbjct: 118 LAMLREAG----IEVRCGLLANEARELNIGF 144 >gi|229025568|ref|ZP_04181976.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH1272] gi|228735750|gb|EEL86337.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH1272] Length = 370 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ AL+ AQ + + P VGAV V + KI+ + + HAE+ A+ Sbjct: 2 TDQEYMALALQLAQGTSGQTSPNPMVGAVVVKDGKIVGMGAHMCAGEE----HAEVHALH 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M E +YVTLEPC C + ++R+ + NG Sbjct: 58 MAG-----ERAKGATVYVTLEPCSHFGKTPPCCELLIEKGVQRVVIATLDCNPLVSGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + E+ G+ E + + + FF K +R Sbjct: 113 RRLEETG----IEVTTGVLEAEATLLNRYFFHYMKTKR 146 >gi|71906245|ref|YP_283832.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Dechloromonas aromatica RCB] gi|71845866|gb|AAZ45362.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Dechloromonas aromatica RCB] Length = 367 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 55/149 (36%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M+ AL+ A+ P VG V V + +I+ + HAE+ A+R Sbjct: 7 DHGMMARALQLAERGLWTTSPNPRVGCVLVRDGEIVGEGWHEKAGE----PHAEVHALRS 62 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ ++P G Sbjct: 63 AG-----ERAKGTTAYVTLEPCSHHGRTPPCAEALIAAGVSRVVAAMTDPNPLVSGKGLA 117 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E G+ E +R++ F Sbjct: 118 LLRAAG----IETASGLLENEARELNIGF 142 >gi|313207146|ref|YP_004046323.1| riboflavin biosynthesis protein ribd [Riemerella anatipestifer DSM 15868] gi|312446462|gb|ADQ82817.1| riboflavin biosynthesis protein RibD [Riemerella anatipestifer DSM 15868] gi|315022456|gb|EFT35483.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Riemerella anatipestifer RA-YM] gi|325335416|gb|ADZ11690.1| Pyrimidine deaminase [Riemerella anatipestifer RA-GD] Length = 339 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 26/160 (16%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++S + A+ A R P VGAV V N II + HAEI A Sbjct: 2 SHEKYISRCIALAEKA--RGNTYPNPLVGAVIVHNGIIIGEGYHHKAGE----PHAEINA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + ++ +L E +YV+LEPC CA I+ +++ G+++ Sbjct: 56 INS---VENKGLLKESTIYVSLEPCSHFGRTPPCATKITEIGFKKVVIGSADSNEKVSGK 112 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 G A E+ + E+R R + + FF +++R Sbjct: 113 GKAMIEEAG----IEVVDKVLEERCRWLNRRFFTFHEKKR 148 >gi|297275690|ref|XP_001096552.2| PREDICTED: tRNA-specific adenosine deaminase-like protein 3-like isoform 2 [Macaca mulatta] Length = 367 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 59/155 (38%), Gaps = 42/155 (27%) Query: 26 VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ--------------- 68 VGAV V +++++ + HA ++ + + R + Sbjct: 211 VGAVVVDPASDRVLATGH-DCSSADNPLLHAVMVCVDLVARGQGRGTYDFRPFPACSFAP 269 Query: 69 -----------------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 + DLYVT EPC MCA A+ +RI R++YGA +P Sbjct: 270 AAAPQAVRAGAVRKLDADEDGLPYVCTGYDLYVTREPCAMCAMALVHSRILRVFYGAPSP 329 Query: 106 KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 G + + + +H +++ G+ E+ R + Sbjct: 330 D-GALGTRFRIHARPDLNHRFQVFRGVLEEECRWL 363 >gi|166710620|ref|ZP_02241827.1| riboflavin-specific deaminase; 5-amino-6-uracil reductase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 369 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL A+ A P VG V V + + ++ HAE+ A+R Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGG----PHAEVFALR 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ A + R+ ++P G Sbjct: 67 AAGELA-----RGATAYVTLEPCAHYGRTPPCALALIEAGVTRVVAAMADPFPQVNGGGF 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ ++R + Q F Sbjct: 122 ALLRDAG----IEVLSGVMHAQARTLNQGF 147 >gi|158315851|ref|YP_001508359.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec] gi|158111256|gb|ABW13453.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec] Length = 212 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 5/115 (4%) Query: 10 CALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDV--TAHAEILAIRMGCRIL 66 ALE A + L + VGA+ +II N+ AHAE+ A+ Sbjct: 24 KALEMAWESYLAGGVGVGAILTDSGGRIIGYGRNQRFASASPRLLAHAEMEAL--AALPP 81 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 ++ + LY TL PC MC A+ +ARI ++ +GA +P GIE+ Sbjct: 82 GKDRAHDAVLYTTLHPCPMCLGAVVVARIGQVRFGAFDPTWLGIEHLPDLNEEVR 136 >gi|170078074|ref|YP_001734712.1| riboflavin biosynthesis protein RibD [Synechococcus sp. PCC 7002] gi|169885743|gb|ACA99456.1| riboflavin biosynthesis protein RibD [Synechococcus sp. PCC 7002] Length = 371 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M + A+ AA + VGAV V + KII + HAE+ A+R Sbjct: 13 DRAMMQRCITLAKQAAGKTAPNPMVGAVVVQDQKIIGEGFH----PGAGQPHAEVFALRE 68 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 LYV+LEPC C+ A+ A I ++ G +P G + Sbjct: 69 AGAAAQ-----GATLYVSLEPCNHHGRTPPCSQAVVKAGISKVVVGMVDPNPLVAGGGLK 123 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 T A E+ G+ E R + F Sbjct: 124 TLTDAG----IEVVTGVEEAACRALNAGF 148 >gi|262395034|ref|YP_003286888.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio sp. Ex25] gi|262338628|gb|ACY52423.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio sp. Ex25] Length = 375 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 56/154 (36%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 MS A++ A+ P VG V V + +I+ + HAE+ A+RM Sbjct: 14 DFAMMSRAIKLARRGIYTTAPNPNVGCVIVRDEEIVGEGYHHRAGE----PHAEVHAMRM 69 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA + A++ R+ +P G Q Sbjct: 70 AGEKA-----VGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMVDPNPKVAGRGIQ 124 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ EQ + + F K R Sbjct: 125 MLRDAG----IEVQIGLLEQDALALNPGFIKYMR 154 >gi|21232920|ref|NP_638837.1| cytosine deaminase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767007|ref|YP_241769.1| cytosine deaminase [Xanthomonas campestris pv. campestris str. 8004] gi|21114755|gb|AAM42761.1| cytosine deaminase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572339|gb|AAY47749.1| cytosine deaminase [Xanthomonas campestris pv. campestris str. 8004] Length = 151 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 13/135 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A+ EA+ IP+GA + +++ NR + D + H E A R R Sbjct: 11 LDTAIAEARQGLAEGGIPIGAALYHSDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR-- 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 Q + + TL PC C+ + I + G S GGI+ + H Sbjct: 69 -QRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGIDWLRE--------HGV 119 Query: 127 EIYPGISEQRSRQII 141 + + Q ++ Sbjct: 120 NVID-LHSQECMDLL 133 >gi|113968486|ref|YP_732279.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. MR-4] gi|113883170|gb|ABI37222.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. MR-4] Length = 157 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 35/89 (39%), Positives = 45/89 (50%), Gaps = 1/89 (1%) Query: 12 LEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 L AQ +P AV V +I++ NR + L D TAHAEI AIR +L Q Sbjct: 13 LALAQKEVEGTGLPFSAVIVDESGRIVAEGVNRVQALHDCTAHAEIQAIRKATLLLKQVS 72 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLY 99 L + L + EPC C AI LA+I R+ Sbjct: 73 LEGMTLIASGEPCGFCYMAIQLAKISRVI 101 >gi|295677354|ref|YP_003605878.1| riboflavin biosynthesis protein RibD [Burkholderia sp. CCGE1002] gi|295437197|gb|ADG16367.1| riboflavin biosynthesis protein RibD [Burkholderia sp. CCGE1002] Length = 383 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + V M AL A+ + P VG V V N ++I + HAEI A+ Sbjct: 4 QTDFVHMERALALAKRGMYTTDPNPRVGCVLVRNGEVIGEGYTQPAGQD----HAEIRAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + L YVTLEPC CA A+ A+I R+ +P G Sbjct: 60 KDA--RSRGHDLRGATAYVTLEPCSHFGRTPPCANALIEAQIGRVIAAMEDPNPQVSGRG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ +R++ F Sbjct: 118 LAMLREAG----IEVRCGLLANEARELNIGF 144 >gi|291562115|emb|CBL40931.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [butyrate-producing bacterium SS3/4] Length = 369 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 49/151 (32%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+E A+ VGAV V + +II + HAE AI Sbjct: 2 TDRDYMLRAIELAKGGLGWTSPNPLVGAVIVKDGRIIGEGYHERCGEL----HAERNAI- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E LYVTLEPC C AI +I R+ G+ +P G Sbjct: 57 ----ASLTESAEGATLYVTLEPCCHYGKTPPCTEAILEQKIARVVIGSRDPNPLVAGKGA 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A + + + FF Sbjct: 113 AILRAAG----VRVEEDFMREECDALNPVFF 139 >gi|303328437|ref|ZP_07358874.1| zinc-binding domain protein [Desulfovibrio sp. 3_1_syn3] gi|302861431|gb|EFL84368.1| zinc-binding domain protein [Desulfovibrio sp. 3_1_syn3] Length = 90 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 46/90 (51%) Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R G L L L VTLEPC MCAAA+ AR+ + YGA++ G + + ++ Sbjct: 1 RAGGAALGNYRLAGCVLAVTLEPCAMCAAALVHARLAGVVYGAADDLAGAVISRAEYLDA 60 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 C+H G+ + +++DFF+ +R Sbjct: 61 PFCNHRVWHMGGVRAEACAALLRDFFERKR 90 >gi|229019323|ref|ZP_04176149.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH1273] gi|228742008|gb|EEL92182.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH1273] Length = 379 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ AL+ AQ + + P VGAV V + KI+ + + HAE+ A+ Sbjct: 11 TDQEYMALALQLAQGTSGQTSPNPMVGAVVVKDGKIVGMGAHMCAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M E +YVTLEPC C + ++R+ + NG Sbjct: 67 MAG-----ERAKGATVYVTLEPCSHFGKTPPCCELLIEKGVQRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + E+ G+ E + + + FF K +R Sbjct: 122 RRLEETG----IEVTTGVLEAEATLLNRYFFHYMKTKR 155 >gi|193076093|gb|ABO10696.2| hypothetical protein A1S_0221 [Acinetobacter baumannii ATCC 17978] Length = 361 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +K+ +M A+E A+ P VG V V +N++I + K HAE+ A Sbjct: 4 LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQLIGEGFH----PKAGQPHAEVFA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R E YVTLEPC CA A+ A+++++ +P Sbjct: 60 LREAG-----EHAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGK 114 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G Q + E+ GI E + Q+ Q F K Sbjct: 115 GVQILK----NAGIEVEIGICEDLAAQLNQGFLKA 145 >gi|146338815|ref|YP_001203863.1| putative cytidine and deoxycytidylate deaminase zinc-binding protein [Bradyrhizobium sp. ORS278] gi|146191621|emb|CAL75626.1| putative cytidine and deoxycytidylate deaminase zinc-binding protein [Bradyrhizobium sp. ORS278] Length = 139 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 14/132 (10%) Query: 21 RNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 P A+ V + +++ A N +D TAHAE L CR ++ +I LY + Sbjct: 3 HGNHPFAAILVDGDGRVLIEAENGYMPDRDATAHAERLVATQACRSIAPDIRATATLYSS 62 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-----------HSPEI 128 EPC MCA AI A I R+ YG S + + T + E+ Sbjct: 63 AEPCAMCAGAIYWAGIGRVVYGLSERRL--RDFTGNHPENPTLDLPCRDVFASGQRTTEV 120 Query: 129 YPGISEQRSRQI 140 + E + + Sbjct: 121 LGPLLEDEAAAL 132 >gi|83648598|ref|YP_437033.1| riboflavin biosynthesis protein RibD [Hahella chejuensis KCTC 2396] gi|83636641|gb|ABC32608.1| riboflavin biosynthesis protein RibD [Hahella chejuensis KCTC 2396] Length = 362 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 38/148 (25%), Positives = 52/148 (35%), Gaps = 21/148 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL A+ + P VG V V I+ + HAE+ A+R Sbjct: 1 MARALRLAERGLYTTDPNPRVGCVLVKEGVIVGEGWHERAGEG----HAEVNALRAAG-- 54 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E D YVTLEPC CA A+ A +RR+ +P G Sbjct: 55 ---ESARGADCYVTLEPCSHYGRTPPCAEALVKAGVRRVIAAMEDPNPSVAGKGLALLRG 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E G + ++ FFK Sbjct: 112 AG----VESEVGCMAAEAYELNLGFFKR 135 >gi|21241410|ref|NP_640992.1| cytosine deaminase [Xanthomonas axonopodis pv. citri str. 306] gi|294625645|ref|ZP_06704268.1| cytosine deaminase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666814|ref|ZP_06732047.1| cytosine deaminase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|21106745|gb|AAM35528.1| cytosine deaminase [Xanthomonas axonopodis pv. citri str. 306] gi|292600068|gb|EFF44182.1| cytosine deaminase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603398|gb|EFF46816.1| cytosine deaminase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 151 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 13/135 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A+ EA+ IP+GA + +++ NR + D + H E A R R Sbjct: 11 LDTAIAEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR-- 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 Q + + TL PC C+ + I + G S GGI + H Sbjct: 69 -QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGIAWLRE--------HGV 119 Query: 127 EIYPGISEQRSRQII 141 + + Q ++ Sbjct: 120 NVID-LQSQECIDLL 133 >gi|297157114|gb|ADI06826.1| cytidine/deoxycytidine deaminase [Streptomyces bingchenggensis BCW-1] Length = 143 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 1/101 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + A+ A A + P G++ + I++ A N R D+TAH E+ R Sbjct: 6 DETLLRRAIGIAARAVTLGDAPYGSLLAGPDGTILAEAHNTVRRDNDITAHPELKLARWA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 R L + LY + +PC MC I + + R+ Y S Sbjct: 66 ARELDPDTAARTTLYTSCQPCGMCGGGIVRSGVGRVVYALS 106 >gi|328876450|gb|EGG24813.1| CMP/dCMP deaminase [Dictyostelium fasciculatum] Length = 251 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 60/151 (39%), Gaps = 15/151 (9%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEILAIRM 61 K +M AL+ + R GAV V N ++ N+ + H EI+AI Sbjct: 60 KHENWMKLALQITKAVNGR----FGAVIVNENGTLACTGVNQ--GKINRINHGEIVAINN 113 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTLA 120 + ++ + LY T EPC MC AAI + + + +G+ Q + A Sbjct: 114 CSNLYTKNMFEGWTLYTTGEPCPMCQAAIMWTKFKTVVFGSYVSNMYCERCLNQLPISSA 173 Query: 121 TCH-------HSPEIYPGISEQRSRQIIQDF 144 + H EI G+ E+ + ++ F Sbjct: 174 AINSLGYGIGHYTEIIGGVLEKETDKLFPTF 204 >gi|325577912|ref|ZP_08148145.1| riboflavin biosynthesis protein RibD [Haemophilus parainfluenzae ATCC 33392] gi|325160342|gb|EGC72469.1| riboflavin biosynthesis protein RibD [Haemophilus parainfluenzae ATCC 33392] Length = 376 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 54/155 (34%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM ALE A P VG V V N +I+ + + + HAE +A+ Sbjct: 8 DDVKFMQLALELAAKGQYTTTPNPSVGCVLVKNGEIVGKGFH--FKAGQP--HAERMALA 63 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA + A + R+ ++P G Sbjct: 64 DAGEKA-----KGATAYVTLEPCSHYGRTPPCALGLIEAGVSRVVAAMADPNPQVAGKGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + A + + +++ + + F K R Sbjct: 119 KMLADAGIPTAVN----LLNEQAEALNKGFLKRMR 149 >gi|213018626|ref|ZP_03334434.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995577|gb|EEB56217.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 399 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 25/148 (16%) Query: 8 MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 MS AL+ A+ + + P VG + V N +I HAE++A++ Sbjct: 1 MSIALKLAEKSL--GSVAPNPAVGCIIVKNGMVIGEGY----TGIGGRPHAEVVALQNAK 54 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + +YVTLEPC C A I + I+R+ A +P G + Sbjct: 55 DLTHS-----ATMYVTLEPCCHFGVTEPCTAEIIKSGIKRVVIAAIDPDSRVSGGGIKAL 109 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ GI ++ + + FF Sbjct: 110 KEAG----IEVEQGIMQKEAEVLNVGFF 133 >gi|225454196|ref|XP_002273879.1| PREDICTED: similar to cytidine/deoxycytidylate deaminase family protein [Vitis vinifera] Length = 379 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 58/151 (38%), Gaps = 21/151 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M +E A+ A + P VG V V + K++ + K H E+ A+ Sbjct: 26 EDDGFYMRRCVELARKAIGCTSPNPMVGCVIVKDGKVVGEGFH----PKAGQPHGEVFAL 81 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + YV+LEPC C A+ A+++++ G +P G Sbjct: 82 RDAGDLAEN-----ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVIGMVDPNPIVASKG 136 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ + E+ +++ + + Sbjct: 137 VDRLRDAG----IEVTVAVEEELCKKLNEAY 163 >gi|21673577|ref|NP_661642.1| riboflavin biosynthesis protein RibD [Chlorobium tepidum TLS] gi|21646689|gb|AAM71984.1| riboflavin biosynthesis protein RibD [Chlorobium tepidum TLS] Length = 373 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 41/157 (26%), Positives = 61/157 (38%), Gaps = 23/157 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + +M LE A+ A + P VG+V V ++I +R HAE+ A Sbjct: 12 EDETYMWRCLELAERGA--GSVSPNPMVGSVIVCAGRVIGEGWHRQYGG----PHAEVDA 65 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + + +L + LYV LEPC CA I RI R+ G +P Sbjct: 66 I---ASVEDESLLRQSTLYVNLEPCSHYGKTPPCADLIVEKRIPRVVVGCLDPHEKVAGK 122 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A E+ G+ E S ++ + F R Sbjct: 123 GIARLREAG----IEVTVGVLEAESERLNEAFMTSHR 155 >gi|293366290|ref|ZP_06612971.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis M23864:W2(grey)] gi|291319592|gb|EFE59957.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis M23864:W2(grey)] Length = 343 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 24/150 (16%) Query: 8 MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A++ A+ + + PVG+V V N +I+ + + K HAE+ AI M Sbjct: 1 MDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAHLKKGDK----HAEVQAIEMAGLN 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +YV+LEPC C I A I ++ Y + + G + Sbjct: 57 TQ-----GATIYVSLEPCTHHGSTPPCVHKIIEAGISKVIYAVKDTTL--VSKGDEILRE 109 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ +E + + +DFF +R Sbjct: 110 AG----IEVEFQYNEN-AAALYRDFFTAKR 134 >gi|262370188|ref|ZP_06063515.1| pyrimidine deaminase [Acinetobacter johnsonii SH046] gi|262315227|gb|EEY96267.1| pyrimidine deaminase [Acinetobacter johnsonii SH046] Length = 367 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 50/152 (32%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A+ A P VG V V + ++ + HAE+ A+R Sbjct: 12 DQAWMKQAIALALQGQYSTKPNPNVGCVIVKDGLLLGTGYHPQAGQL----HAEVFAMRE 67 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA + A + R+ +P G Q Sbjct: 68 AGEQTQ-----GATAYVTLEPCAHYGRTPPCAKGLVEAGVARVVIACPDPNPLVAGKGVQ 122 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ GI + + Q+ F K Sbjct: 123 ILKEAG----IEVDVGICQTEAHQLNAGFLKA 150 >gi|291541288|emb|CBL14399.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Roseburia intestinalis XB6B4] Length = 396 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 57/153 (37%), Gaps = 19/153 (12%) Query: 1 MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ +M A+E A+ + VGAV V ++II ++ HAE A Sbjct: 31 MQQ-ERYMRRAMELAELGRGWTKTNPVVGAVLVKEDRIIGEGYHKKFGGL----HAEREA 85 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + E DLYVTLEPC C A+ A I ++ GA + Sbjct: 86 L--ADCRSRGEDPAGADLYVTLEPCCHYGKTPPCTQAVIEAGISHVFVGAKDINPLVAGG 143 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + + G+ ++ + FF Sbjct: 144 GIRQLREQGIL----VTEGVLQEECEYQNRVFF 172 >gi|91225069|ref|ZP_01260291.1| riboflavin-specific deaminase [Vibrio alginolyticus 12G01] gi|91190012|gb|EAS76283.1| riboflavin-specific deaminase [Vibrio alginolyticus 12G01] Length = 375 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 56/154 (36%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 MS A++ A+ P VG V V + +I+ + HAE+ A+RM Sbjct: 14 DFAMMSRAIKLAKRGIYTTAPNPNVGCVIVRDEEIVGEGYHHRAGE----PHAEVHAMRM 69 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA + A++ R+ +P G Q Sbjct: 70 AGEKA-----VGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMVDPNPKVAGRGIQ 124 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ EQ + + F K R Sbjct: 125 MLRDAG----IEVQIGLLEQDALALNPGFIKYMR 154 >gi|300727427|ref|ZP_07060836.1| riboflavin biosynthesis protein RibD [Prevotella bryantii B14] gi|299775307|gb|EFI71906.1| riboflavin biosynthesis protein RibD [Prevotella bryantii B14] Length = 320 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 58/158 (36%), Gaps = 23/158 (14%) Query: 1 MKK---GNVFMSCALEEAQNAA--LRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHA 54 M + +M + A+N + VGAV V +N+II + HA Sbjct: 1 MNQKSIDEKYMRRCIAIARNGLNSAKPNPSVGAVIVSADNRIIGEGYTSSYGG----PHA 56 Query: 55 EILAIRMGCRILSQEIL-PEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKG 107 E+ A E L + LYV+LEPC CA + ++R G +P Sbjct: 57 EVNAF--ASVKPEDEHLLADATLYVSLEPCSHYGKTPPCADLVVRKGVKRCVCGCIDPFS 114 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A ++ G+ E+ + + FF Sbjct: 115 EVQGRGIKKLRDAG----IDVTVGVLEKECKASNKRFF 148 >gi|222099734|ref|YP_002534302.1| Riboflavin biosynthesis protein RibD [Thermotoga neapolitana DSM 4359] gi|221572124|gb|ACM22936.1| Riboflavin biosynthesis protein RibD [Thermotoga neapolitana DSM 4359] Length = 348 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 14/110 (12%) Query: 5 NVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A+E A+ R PVGAV V +IIS + HAE +AI Sbjct: 3 ERFMKRAIELAKKGLGRVNPNPPVGAVVVKEGRIISEGFHPYFGG----PHAERVAIESA 58 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106 R E L L VTLEPC C I + I+++ G +P Sbjct: 59 KRK--GEDLTGTTLVVTLEPCDHHGKTPPCTDLIIESGIKKVVIGMRDPN 106 >gi|58583479|ref|YP_202495.1| riboflavin-specific deaminase; 5-amino-6-uracil reductase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84625292|ref|YP_452664.1| riboflavin-specific deaminase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188575264|ref|YP_001912193.1| riboflavin biosynthesis protein RibD [Xanthomonas oryzae pv. oryzae PXO99A] gi|58428073|gb|AAW77110.1| riboflavin-specific deaminase; 5-amino-6-uracil reductase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84369232|dbj|BAE70390.1| riboflavin-specific deaminase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519716|gb|ACD57661.1| riboflavin biosynthesis protein RibD [Xanthomonas oryzae pv. oryzae PXO99A] Length = 369 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL A+ A P VG V V + + ++ HAE+ A+R Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGG----PHAEVFALR 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ A + R+ ++P G Sbjct: 67 AAGELA-----RGATAYVTLEPCAHYGRTPPCALALIEAGVTRVVAAMADPFPQVNGGGF 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ ++R + Q F Sbjct: 122 ALLRDAG----IEVLSGVMHAQARTLNQGF 147 >gi|332662070|ref|YP_004444858.1| riboflavin biosynthesis protein RibD [Haliscomenobacter hydrossis DSM 1100] gi|332330884|gb|AEE47985.1| riboflavin biosynthesis protein RibD [Haliscomenobacter hydrossis DSM 1100] Length = 351 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 62/152 (40%), Gaps = 24/152 (15%) Query: 1 MKKG-NVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55 M K N +++ + A+ A + P VGAV V +NKII ++ AHAE Sbjct: 1 MVKDINRYITRCFDLARMGA--GSVSPNPMVGAVLVYDNKIIGEGYHQKYGG----AHAE 54 Query: 56 ILAIRMGCRILSQEIL-PEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108 + A+ LS L PE LYV+LEPC C I +I R+ + Sbjct: 55 VNAL--ASVSLSNRPLIPESTLYVSLEPCCIFGKTPPCTNLIIQEKIPRVVISCLDLTPE 112 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 G + H E+ G+ E+ + + Sbjct: 113 VKGRGVELLRA----HGIEVTTGVLEKEGQAL 140 >gi|312880086|ref|ZP_07739886.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase ;5-amino-6-(5-phosphoribosylamino)uracil reductase [Aminomonas paucivorans DSM 12260] gi|310783377|gb|EFQ23775.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase ;5-amino-6-(5-phosphoribosylamino)uracil reductase [Aminomonas paucivorans DSM 12260] Length = 378 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 54/154 (35%), Gaps = 21/154 (13%) Query: 2 KKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ FM AL A + VG V V K++ +R HAE+ A+ Sbjct: 16 REHQYFMHMALSLALRGTGFVSPNPRVGCVVVREGKVVGWGYHRRYGG----PHAEVEAL 71 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + +YV LEPC CA + AR+ R G +P G Sbjct: 72 RRAGTLA-----EGSTVYVNLEPCSHQGKTPPCAPQLVEARVARAVVGMRDPNPRVDGRG 126 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ + + +R I + F + Sbjct: 127 IDLLRDAG----IEVLESVLPEEARWINRGFIRR 156 >gi|289664006|ref|ZP_06485587.1| cytosine deaminase [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667443|ref|ZP_06488518.1| cytosine deaminase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 151 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 13/135 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A+ EA+ IP+GA + +++ NR + D + H E A R R Sbjct: 11 LDTAITEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR-- 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 Q + + TL PC C+ + I + G S GGI + H Sbjct: 69 -QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGIAWLRE--------HGV 119 Query: 127 EIYPGISEQRSRQII 141 + + Q ++ Sbjct: 120 NVID-LQSQECIDLL 133 >gi|325925419|ref|ZP_08186818.1| cytosine/adenosine deaminase [Xanthomonas perforans 91-118] gi|325928766|ref|ZP_08189935.1| cytosine/adenosine deaminase [Xanthomonas perforans 91-118] gi|325540847|gb|EGD12420.1| cytosine/adenosine deaminase [Xanthomonas perforans 91-118] gi|325544179|gb|EGD15563.1| cytosine/adenosine deaminase [Xanthomonas perforans 91-118] Length = 151 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 13/135 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A+ EA+ IP+GA + +++ NR + D + H E A R R Sbjct: 11 LDTAITEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR-- 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 Q + + TL PC C+ + I + G S GGI + H Sbjct: 69 -QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGIAWLRE--------HGV 119 Query: 127 EIYPGISEQRSRQII 141 + + Q ++ Sbjct: 120 NVID-LQSQECIDLL 133 >gi|311694330|gb|ADP97203.1| CMP/dCMP deaminase, zinc-binding protein [marine bacterium HP15] Length = 159 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 3/107 (2%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A++ A + +P AV V N ++ + N+ E D TAHAEI AIR R + Sbjct: 17 AIDLAISNVKAGGLPFSAVIVNQNGDVVGKGVNQVAEHLDCTAHAEIQAIRDASRNENSV 76 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L L + EPC +C AI +A I + + ENG + Sbjct: 77 SLKGTTLIASGEPCALCYMAIRMAGIGHVRILL--DRYEAAENGFDY 121 >gi|297584480|ref|YP_003700260.1| riboflavin biosynthesis protein RibD [Bacillus selenitireducens MLS10] gi|297142937|gb|ADH99694.1| riboflavin biosynthesis protein RibD [Bacillus selenitireducens MLS10] Length = 361 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 60/151 (39%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALE--EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M A+E EA VG V V +N+I + HAE A+ Sbjct: 2 NDDHYMKLAIEIAEATKGQTSPNPQVGCVIVKHNQIKGIGAHLKAGE----WHAERQALH 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +E YVTLEPC C+ A+ A I R+ +S+P G Sbjct: 58 MA-----KEEANGATAYVTLEPCSHHGKTPPCSDALIEAGISRVVTASSDPNPDVSGRGI 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A E+ G+ ++R+ ++ + FF Sbjct: 113 RRLRDAG----IEVVEGVQKERADRMNRWFF 139 >gi|320333701|ref|YP_004170412.1| CMP/dCMP deaminase zinc-binding protein [Deinococcus maricopensis DSM 21211] gi|319754990|gb|ADV66747.1| CMP/dCMP deaminase zinc-binding protein [Deinococcus maricopensis DSM 21211] Length = 184 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 12/128 (9%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDV-------TAHA 54 ++ L A+ A + PVGAV V II+R NR E + AHA Sbjct: 2 DHRPYLQETLRLAREAQTQGSAPVGAVLVNEHGDIIARGRNRVGEAQTPQHVGDASVAHA 61 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E+ ++ + L LY +LEPC MC A +L +RR+ + +P GG Sbjct: 62 EMDLYFQIGKLKDPQHL---TLYTSLEPCLMCGGASALLGVRRIVWATDDPW-GGSGRLI 117 Query: 115 QFYTLATC 122 ++ Sbjct: 118 KWADHPAM 125 >gi|229117606|ref|ZP_04246978.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock1-3] gi|228665926|gb|EEL21396.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock1-3] Length = 379 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAKGTSGQTSPNPMVGAVVVKDGNIVGMGAHLCAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + ++R+ + NG Sbjct: 67 MAGEKAKN-----ATVYVTLEPCSHFGKTPPCCELLIEKGVKRIVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 KKLEEAG----IEVTTGVLETEAVLLNRYFFHYMKTKR 155 >gi|332676151|gb|AEE72967.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes 266] Length = 323 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 21/144 (14%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL+ A + + P VG V V +++I + +R T HAE+ A+R Sbjct: 1 MALALDMAAKSPCPDPNPRVGCVIVAEDRVIGQGWHR----GAGTPHAEVEALRQAG--- 53 Query: 67 SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + + VTLEPC C+ A+ A I R+ S+P T Sbjct: 54 --DDVRGATAVVTLEPCHHTGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRT-- 109 Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144 H E+ G+ + + + D+ Sbjct: 110 ---HGVEVVTGVLSEEATALNADW 130 >gi|262280656|ref|ZP_06058439.1| pyrimidine deaminase [Acinetobacter calcoaceticus RUH2202] gi|262257556|gb|EEY76291.1| pyrimidine deaminase [Acinetobacter calcoaceticus RUH2202] Length = 361 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +KK +M A+E A+ P VG V V ++++I + K HAE+ A Sbjct: 4 LKKDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFH----PKAGQPHAEVFA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R YVTLEPC CA A+ A+++++ +P Sbjct: 60 LRQAAEQAQ-----GATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGK 114 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G Q + E+ GI E + ++ Q F K Sbjct: 115 GVQILK----NAGIEVEVGICEDLAEKLNQGFLKA 145 >gi|317484774|ref|ZP_07943673.1| riboflavin biosynthesis protein RibD [Bilophila wadsworthia 3_1_6] gi|316923981|gb|EFV45168.1| riboflavin biosynthesis protein RibD [Bilophila wadsworthia 3_1_6] Length = 379 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 53/148 (35%), Gaps = 19/148 (12%) Query: 5 NVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A E A+ P VGAV V + ++R + +HAE+ ++ Sbjct: 6 ESFMREAAELAERGRWSAAPNPTVGAVLVRDGVAVARGWHTAYGK----SHAEVECLKDA 61 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L VTLEPC C A+ A IR + G +P + Sbjct: 62 EAKGVDP--SACTLVVTLEPCNHQGQTPPCTEAVIAAGIRHVVIGLRDPNPKAAGGMERL 119 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 E+ G+ E+ R ++ DF Sbjct: 120 AEA-----GVEVEAGVCEELCRDLVADF 142 >gi|184156566|ref|YP_001844905.1| pyrimidine deaminase [Acinetobacter baumannii ACICU] gi|332874950|ref|ZP_08442801.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii 6014059] gi|183208160|gb|ACC55558.1| Pyrimidine deaminase [Acinetobacter baumannii ACICU] gi|322506453|gb|ADX01907.1| ribD [Acinetobacter baumannii 1656-2] gi|323516332|gb|ADX90713.1| pyrimidine deaminase [Acinetobacter baumannii TCDC-AB0715] gi|332736893|gb|EGJ67869.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii 6014059] Length = 361 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +K+ +M A+E A+ P VG V V ++++I + K HAE+ A Sbjct: 4 LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFH----PKAGQPHAEVFA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R YVTLEPC CA A+ A+++++ +P Sbjct: 60 LRQAGEQAQ-----GATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGK 114 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G Q + E+ GI E + Q+ Q F K Sbjct: 115 GVQILK----NAGIEVEIGICEDLAAQLNQGFLKA 145 >gi|21618159|gb|AAM67209.1| probable riboflavin biosynthesis related protein [Arabidopsis thaliana] Length = 426 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 60/150 (40%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M +E A+ A + P VG V V + I+ + + K HAE+ A+R Sbjct: 73 DDSFYMRKCVELAKRAIGCTSPNPMVGCVIVKDGDIVGQGFH----PKAGQPHAEVFALR 128 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YV+LEPC C A+ A++RR+ G +P +G Sbjct: 129 DAGELAEN-----ATAYVSLEPCNHYGRTPPCTEALIKAKVRRVVIGMVDPNPIVFSSGI 183 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ + E+ +++ + F Sbjct: 184 SRLKDAG----IDVTVSVEEELCKKMNEGF 209 >gi|27904888|ref|NP_778014.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46396884|sp|Q89AB0|RIBD_BUCBP RecName: Full=Riboflavin biosynthesis protein RibD; Includes: RecName: Full=Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase; Includes: RecName: Full=5-amino-6-(5-phosphoribosylamino)uracil reductase; AltName: Full=HTP reductase gi|27904286|gb|AAO27119.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 372 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 21/153 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 K +M A++ A+ +L P VG + V NN I+ ++ +K HAEI A+ Sbjct: 2 KDIFYMKKAIKLAKKGSLTTSPNPNVGCIIVNNNIIVGSGWHKKTGMK----HAEIYAL- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 S E Y+TLEPC C A++ I R+ +P NG Sbjct: 57 ----KTSGEKAKGATAYITLEPCSHFGKTPPCCVALTKYGISRVVIATLDPNPKVSGNGV 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 ++ H + G + S +I + FF+ Sbjct: 113 KWLKK----HGILVTIGTLSKESIKINKGFFQR 141 >gi|18415600|ref|NP_567618.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis thaliana] gi|26452452|dbj|BAC43311.1| unknown protein [Arabidopsis thaliana] gi|29824151|gb|AAP04036.1| unknown protein [Arabidopsis thaliana] gi|332658979|gb|AEE84379.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Arabidopsis thaliana] Length = 426 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 60/150 (40%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M +E A+ A + P VG V V + I+ + + K HAE+ A+R Sbjct: 73 DDSFYMRKCVELAKRAIGCTSPNPMVGCVIVKDGDIVGQGFH----PKAGQPHAEVFALR 128 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YV+LEPC C A+ A++RR+ G +P +G Sbjct: 129 DAGELAEN-----ATAYVSLEPCNHYGRTPPCTEALIKAKVRRVVIGMVDPNPIVFSSGI 183 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ + E+ +++ + F Sbjct: 184 SRLKDAG----IDVTVSVEEELCKKMNEGF 209 >gi|20091176|ref|NP_617251.1| cytosine deaminase [Methanosarcina acetivorans C2A] gi|19916284|gb|AAM05731.1| cytosine deaminase [Methanosarcina acetivorans C2A] Length = 189 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 48/135 (35%), Gaps = 16/135 (11%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIR 60 FM A+ AQ + P+G V + NN +I+ + N + D H E AIR Sbjct: 40 SDRNFMRIAVLLAQKSYDEGGCPIGGVIIDNNTRRIVGKGHNTLVQDNDPYNHGETSAIR 99 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R ++ TL PC +CA I + + R+ + + T Sbjct: 100 DAGRQ----DFSNTTIFTTLSPCDVCATLIYMRQFDRVV----------VGDVTNASGNE 145 Query: 121 TCHHSPEIYPGISEQ 135 H + I E Sbjct: 146 QMLHEKGVKVDILED 160 >gi|52141386|ref|YP_085445.1| riboflavin biosynthesis protein [Bacillus cereus E33L] gi|51974855|gb|AAU16405.1| riboflavin biosynthesis protein [Bacillus cereus E33L] Length = 370 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 55/158 (34%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ VGA+ V + I+ + + HAE+ A+ Sbjct: 2 TDQEYMRIALQLAEGTCGQTSPNPMVGAIVVKDGNIVGMGAHLRAGEE----HAEVHALH 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + I R+ + NG Sbjct: 58 MAGDKA-----KGATVYVTLEPCSHFGKTPPCCDLLIKKGITRVVIATLDCNPLVSGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 113 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 146 >gi|284047735|ref|YP_003398074.1| riboflavin biosynthesis protein RibD [Acidaminococcus fermentans DSM 20731] gi|283951956|gb|ADB46759.1| riboflavin biosynthesis protein RibD [Acidaminococcus fermentans DSM 20731] Length = 371 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 22/151 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 +M AL+ A+ A P VG V V +I+ + + HAEI+A+ Sbjct: 8 TDEEYMQMALDLAEKARGCTSPNPLVGCVIVNPEGQIVGKGYHHKAGQ----PHAEIMAM 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 + YVTLEPC+ C A+ A I+++ A +P G Sbjct: 64 ADAGNQV-----EGCTAYVTLEPCSHYGRTGPCCEALIRAGIKKVVAAADDPNPKVAGRG 118 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ ++ + + F Sbjct: 119 FARLQEAG----VEVVRGVLADKANRQNEVF 145 >gi|242243028|ref|ZP_04797473.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus epidermidis W23144] gi|242233486|gb|EES35798.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase [Staphylococcus epidermidis W23144] Length = 343 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 24/150 (16%) Query: 8 MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A++ A+ + + PVG+V V N +I+ + + K HAE+ AI M Sbjct: 1 MDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAHLKKGDK----HAEVQAIEMAGLK 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +YV+LEPC C I A I ++ Y + + G + Sbjct: 57 AQ-----GATIYVSLEPCTHHGSTPPCVDKIIEAGISKVIYAVKDTTL--VSKGDEILRE 109 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ +E + + +DFF +R Sbjct: 110 AG----IEVEFQYNEN-AATLYRDFFTAKR 134 >gi|229163049|ref|ZP_04291005.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus R309803] gi|228620455|gb|EEK77325.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus R309803] Length = 379 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + ++R+ + NG Sbjct: 67 MAGEKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKGVQRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ GI E + + + FF K +R Sbjct: 122 RRLEEAG----IEVTTGILEAEATLLNRFFFHYMKTKR 155 >gi|332295153|ref|YP_004437076.1| CMP/dCMP deaminase zinc-binding protein [Thermodesulfobium narugense DSM 14796] gi|332178256|gb|AEE13945.1| CMP/dCMP deaminase zinc-binding protein [Thermodesulfobium narugense DSM 14796] Length = 154 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 10/132 (7%) Query: 18 AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLY 77 + E+P+GA+ I+S + N HAEILAI+ + ++ + +Y Sbjct: 16 SFNAGELPIGAIICKEGNILSMSQNFCERSNSPIEHAEILAIKKAIQRYNRWYIQGSTIY 75 Query: 78 VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 +LEPC MCA AI +I+ + + S+ + Q E++ ++R Sbjct: 76 CSLEPCLMCAGAIIECKIKNVIFCVSSKN-----STRQILESNDIF-CIEMF----DERF 125 Query: 138 RQIIQDFFKERR 149 R +I+ FFKE R Sbjct: 126 RNLIERFFKEIR 137 >gi|83311440|ref|YP_421704.1| riboflavin biosynthesis protein ribD [Magnetospirillum magneticum AMB-1] gi|82946281|dbj|BAE51145.1| Riboflavin biosynthesis protein ribD [Magnetospirillum magneticum AMB-1] Length = 375 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 52/148 (35%), Gaps = 25/148 (16%) Query: 8 MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M AL A+ + P VG V V + +++ R + HAE A+ M Sbjct: 18 MRAALALARRGL--GTVWPNPAVGCVIVKDGRVVGRGWTQPGGR----PHAETEALAMAG 71 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 +YVTLEPC CA A+ A + R+ +P G Sbjct: 72 SAA-----LGATVYVTLEPCAHHGKTAPCADALVAAGVSRVVVAVQDPDSRVAGKGVDRL 126 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 +A + G+ + ++ FF Sbjct: 127 RVAGIP----VTEGVLHAEAAELNAGFF 150 >gi|323343508|ref|ZP_08083735.1| riboflavin biosynthesis protein RibD [Prevotella oralis ATCC 33269] gi|323095327|gb|EFZ37901.1| riboflavin biosynthesis protein RibD [Prevotella oralis ATCC 33269] Length = 321 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 54/152 (35%), Gaps = 19/152 (12%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ +M ++ A N VGA+ +II + HAE+ Sbjct: 15 EEDIRYMRRCIQLALNGMQNAKPNPMVGALLACEGRIIGEGYHIRFGEG----HAEVNCF 70 Query: 60 RMGCRILSQEIL-PEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + E L P+ LYV+LEPC CA I +RR+ G +P Sbjct: 71 --ASVKPADEHLLPQSTLYVSLEPCSHYGKTPPCADLIIRNGVRRVVVGCIDPFAQVHGR 128 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A E+ G+ E+ + + F Sbjct: 129 GIHKLREAG----IEVVVGVLERECLALNKRF 156 >gi|189346359|ref|YP_001942888.1| riboflavin biosynthesis protein RibD [Chlorobium limicola DSM 245] gi|189340506|gb|ACD89909.1| riboflavin biosynthesis protein RibD [Chlorobium limicola DSM 245] Length = 372 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 53/155 (34%), Gaps = 19/155 (12%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M E A A+ VG V V ++I +R HAE+ A+ Sbjct: 11 THEHYMQRCHELALMGSGAVSPNPMVGCVIVSGGQVIGEGFHRQYGG----PHAEVNAV- 65 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +E L LYV LEPC C+ I I R+ G +P G Sbjct: 66 --ASVADRERLRNATLYVNLEPCSHFGKTPPCSDMIVEMGIPRVVIGCRDPHLKVAGKGI 123 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 E+ G+ E S ++ + F R Sbjct: 124 AKLLAGG----VEVIEGVLETESERLNEAFITVHR 154 >gi|289671055|ref|ZP_06492130.1| riboflavin biosynthesis protein RibD [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 369 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL A+ A P VG V V + + ++ HAE+ A+R Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGG----PHAEVFALR 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ A + R+ ++P G Sbjct: 67 AAGELA-----RGATAYVTLEPCAHYGRTPPCALALIDAGVTRVVAAMADPFPQVNGGGF 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ ++R + + F Sbjct: 122 ALLRDAG----IEVLSGVMHAQARTLNRGF 147 >gi|289663675|ref|ZP_06485256.1| riboflavin biosynthesis protein RibD [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 369 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL A+ A P VG V V + + ++ HAE+ A+R Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGG----PHAEVFALR 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ A + R+ ++P G Sbjct: 67 AAGELA-----RGATAYVTLEPCAHYGRTPPCALALIDAGVTRVVAAMADPFPQVNGGGF 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ ++R + + F Sbjct: 122 ALLRDAG----IEVLSGVMHAQARTLNRGF 147 >gi|325915009|ref|ZP_08177339.1| cytosine/adenosine deaminase [Xanthomonas vesicatoria ATCC 35937] gi|325538779|gb|EGD10445.1| cytosine/adenosine deaminase [Xanthomonas vesicatoria ATCC 35937] Length = 151 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 13/135 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A+ EA+ IP+GA + +++ NR + D + H E A R R Sbjct: 11 LDTAIAEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR-- 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 Q + + TL PC C+ + I + G S GGI + H Sbjct: 69 -QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGIAWLRE--------HGV 119 Query: 127 EIYPGISEQRSRQII 141 + + Q ++ Sbjct: 120 NVID-LQSQECIDLL 133 >gi|269965078|ref|ZP_06179243.1| riboflavin-specific deaminase [Vibrio alginolyticus 40B] gi|269830381|gb|EEZ84606.1| riboflavin-specific deaminase [Vibrio alginolyticus 40B] Length = 375 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 56/154 (36%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 MS A++ A+ P VG V V + +I+ + HAE+ A+RM Sbjct: 14 DFAMMSRAIKLAKRGIYTTAPNPNVGCVIVRDEEIVGEGYHHRAGE----PHAEVHAMRM 69 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA + A++ R+ +P G Q Sbjct: 70 AGEKA-----VGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMVDPNPKVAGRGIQ 124 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ EQ + + F K R Sbjct: 125 MLRDAG----IEVQIGLLEQDALALNPGFIKYMR 154 >gi|226288486|gb|EEH43998.1| tRNA-specific adenosine deaminase [Paracoccidioides brasiliensis Pb18] Length = 164 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 49/151 (32%), Gaps = 45/151 (29%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE------LKDVTAHAEI 56 K FM AL+ + A E PVG V V N +II A + + K T Sbjct: 16 KHEYFMRKALDMGEEALASGETPVGCVLVHNEEIIGSAVSSSNLRRRRSVEKSPT----- 70 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 RIR +Y+G +N + GG Sbjct: 71 ----------------------------------KQYRIRHVYFGCANERFGGTGGVLNL 96 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 ++ E+ G+ + + +++ F+ + Sbjct: 97 HSDPGIDPPYELTGGLFRKEAIMLLRRFYIQ 127 >gi|111145470|gb|ABH06955.1| cytidine/deoxycytidylate deaminase family protein [Desulfovibrio vulgaris] Length = 88 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 41/82 (50%) Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 L L TLEPC MCA AI AR+ + YGA +PK G + + + + +H P Sbjct: 5 NYRLGGTFLVXTLEPCLMCAGAIVHARVEGVVYGAEDPKAGAVTSCLEAFEQPFLNHRPW 64 Query: 128 IYPGISEQRSRQIIQDFFKERR 149 G+ + I++DFF RR Sbjct: 65 HMGGVRRRACTAILKDFFNGRR 86 >gi|78046250|ref|YP_362425.1| putative cytosine deaminase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034680|emb|CAJ22325.1| putative cytosine deaminase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 151 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 13/135 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A+ EA+ IP+GA + +++ NR + D + H E A R R Sbjct: 11 LDTAITEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR-- 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 Q + + TL PC C+ + I + G S GGI + H Sbjct: 69 -QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGIAWLRE--------HGV 119 Query: 127 EIYPGISEQRSRQII 141 + + Q ++ Sbjct: 120 NVID-LHSQECIDLL 133 >gi|313904567|ref|ZP_07837942.1| riboflavin biosynthesis protein RibD [Eubacterium cellulosolvens 6] gi|313470537|gb|EFR65864.1| riboflavin biosynthesis protein RibD [Eubacterium cellulosolvens 6] Length = 367 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 54/146 (36%), Gaps = 21/146 (14%) Query: 8 MSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+E A+ VGAV V + KII +R HAE R + Sbjct: 1 MRRAIELARQGEGWCHPNPMVGAVIVRDGKIIGEGYHRKCGEL----HAE----RNAFQS 52 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L +E LYVTLEPC C AI +IR++ G+ +P G + Sbjct: 53 L-RESAEGAVLYVTLEPCCHVGRTPPCTEAIIGHKIRKVVIGSRDPNPKVHGKGAELLRR 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ + + FF Sbjct: 112 AG----IEVVEDFLREECDALNDVFF 133 >gi|229157695|ref|ZP_04285770.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus ATCC 4342] gi|228625652|gb|EEK82404.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus ATCC 4342] Length = 379 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 58/158 (36%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M LYVTLEPC C + ++R+ + NG Sbjct: 67 MAGEKA-----KGATLYVTLEPCSHFGKTPPCCDLLLKKGVKRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ + E + + + FF K +R Sbjct: 122 RRLEEAG----IEVTTVVLEAEAVLLNRYFFHYMKTKR 155 >gi|221632527|ref|YP_002521748.1| riboflavin biosynthesis protein RibD [Thermomicrobium roseum DSM 5159] gi|221155601|gb|ACM04728.1| riboflavin biosynthesis protein RibD [Thermomicrobium roseum DSM 5159] Length = 382 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 53/142 (37%), Gaps = 25/142 (17%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 + +M A+ A+ A + + P VGAV V +++ + HAEI Sbjct: 5 LDTDRYWMQRAIALARRA--QGRVAPNPAVGAVIVREGEVVGEGCTQPPGG----PHAEI 58 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 +A++ E LYVTLEPC C AI A IRR+ +P Sbjct: 59 VALQRAG-----ERARGATLYVTLEPCAHYGRTPPCVEAIVQAGIRRVVAAILDPFPAVA 113 Query: 111 ENGTQFYTLATCHHSPEIYPGI 132 G A ++ GI Sbjct: 114 GRGFTLLRQAG----VDVTVGI 131 >gi|166710521|ref|ZP_02241728.1| cytosine deaminase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 151 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 13/135 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A+ EA+ IP+GA + +++ NR + D + H E A R R Sbjct: 11 LDTAITEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR-- 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 Q + + TL PC C+ + I + G S GGI + H Sbjct: 69 -QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGIAWLRE--------HGV 119 Query: 127 EIYPGISEQRSRQII 141 + + Q ++ Sbjct: 120 NVID-LQSQECIDLL 133 >gi|288555991|ref|YP_003427926.1| riboflavin specific deaminase [Bacillus pseudofirmus OF4] gi|288547151|gb|ADC51034.1| riboflavin specific deaminase [Bacillus pseudofirmus OF4] Length = 360 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 58/153 (37%), Gaps = 25/153 (16%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 K +M AL A+ R + P VG+V V + I+ + HAE+ A Sbjct: 2 KDIDYMKLALTLAEQ--TRGQTSPNPMVGSVVVKDGAIVGMGAHLKAGEG----HAEVNA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++M +YVTLEPC CA I +++R+ +P Sbjct: 56 LKMAGEKA-----EGATIYVTLEPCSHYGKTPPCADLIIEKQLKRVVVATVDPNPEVSGR 110 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + + + G+ E + ++ + FF Sbjct: 111 GIKRLRDSG----ITVDVGVCEAEAIELNRMFF 139 >gi|239502078|ref|ZP_04661388.1| pyrimidine deaminase [Acinetobacter baumannii AB900] Length = 361 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +K+ +M A+E A+ P VG V V +N++I + K HAE+ A Sbjct: 4 LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQLIGEGFH----PKAGQPHAEVFA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R YVTLEPC CA A+ A+++++ +P Sbjct: 60 LREAGEQAQ-----GATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGK 114 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G Q + E+ GI E + Q+ Q F K Sbjct: 115 GVQILE----NAGIEVEIGICEDLAAQLNQGFLKA 145 >gi|320016370|gb|ADV99941.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 369 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 54/157 (34%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ +M+ A E + + P VG V V + +I+ + HAE+ A Sbjct: 1 MQPDEFYMARAFELVRLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM YVTLEPC CA A+ A + R+ +P Sbjct: 57 LRMAGEKA-----RGATAYVTLEPCSHYGRTPPCADALVAAGVIRVVAAMQDPNPEVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A + G+ + + F K R Sbjct: 112 GLYKLKQAG----IAVDHGLMLAEAEAVNLGFLKRMR 144 >gi|220909715|ref|YP_002485026.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 7425] gi|219866326|gb|ACL46665.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 7425] Length = 392 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 53/149 (35%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M L A+ A P VG V V + +I+ + HAE+ A+R Sbjct: 25 DQIMMQRCLTLARQAQGQTAPNPLVGCVIVKDGEIVGEGFHPKAGE----PHAEVFALRA 80 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + LYV LEPC C+ A+ A I R+ G +P G Sbjct: 81 AG-----DRAVGATLYVNLEPCNHYGRTPPCSEAVVKAGIGRVVVGMVDPDPRVSGGGIA 135 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E R + + F Sbjct: 136 RLRAAG----IEVTVGVEEMACRDLNEAF 160 >gi|13472273|ref|NP_103840.1| hypothetical protein mll2512 [Mesorhizobium loti MAFF303099] gi|14023018|dbj|BAB49626.1| mll2512 [Mesorhizobium loti MAFF303099] Length = 156 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 34/109 (31%), Positives = 44/109 (40%), Gaps = 8/109 (7%) Query: 1 MKKGNVF--MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57 M + +F + A + A+ AA P G V V ++ I+ R GN + HAE Sbjct: 1 MTRDQMFAHLRAANDVAREAAAHGHHPFGCVLVGPDDHILMRQGN-----INTVRHAETE 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 R E L L T EPC MC + A I RL YG K Sbjct: 56 LGRRAADAYPPEFLWSCTLVSTGEPCAMCTGTLYWANIGRLVYGFEETK 104 >gi|188990100|ref|YP_001902110.1| cytosine deaminase [Xanthomonas campestris pv. campestris str. B100] gi|167731860|emb|CAP50044.1| cytosine deaminase [Xanthomonas campestris pv. campestris] Length = 151 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 13/135 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A+ EA+ IP+GA + +++ NR + D + H E A R R Sbjct: 11 LDTAIAEARQGLAEGGIPIGAALYHSDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR-- 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 Q + + TL PC C+ + I + G S GGI+ + H Sbjct: 69 -QRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGIDWLRE--------HGV 119 Query: 127 EIYPGISEQRSRQII 141 + + Q ++ Sbjct: 120 TVID-MQSQECMDLL 133 >gi|291534448|emb|CBL07560.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Roseburia intestinalis M50/1] Length = 366 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 57/153 (37%), Gaps = 19/153 (12%) Query: 1 MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ +M A+E A+ + VGAV V ++II ++ HAE A Sbjct: 1 MQQ-ERYMRRAMELAELGRGWTKTNPVVGAVLVKEDRIIGEGYHKKFGGL----HAEREA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + E DLYVTLEPC C A+ A I ++ GA + Sbjct: 56 L--ADCRSRGEDPAGADLYVTLEPCCHYGKTPPCTQAVIEAGISHVFVGAEDINPLVAGA 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + + G+ ++ + FF Sbjct: 114 GIRQLREQGIL----VTEGVLQEECEYQNRVFF 142 >gi|146310543|ref|YP_001175617.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Enterobacter sp. 638] gi|145317419|gb|ABP59566.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Enterobacter sp. 638] Length = 367 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 55/155 (35%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++M+ AL+ AQ + P VG V V + I+ + HAE+ A+R Sbjct: 2 QDEIYMARALKLAQRGRFTTHPNPNVGCVIVKDGVIVGEGFHYRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----RGATAYVTLEPCSHHGRTPPCCEALIDAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + + + F K R Sbjct: 113 YRLQQEG----IDVSHGLMMADTEALNKGFLKRMR 143 >gi|71898908|ref|ZP_00681075.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase, C-terminal [Xylella fastidiosa Ann-1] gi|71731320|gb|EAO33384.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase, C-terminal [Xylella fastidiosa Ann-1] Length = 364 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M AL A+ A P VG V V + +++ ++ D HAE+ A+ Sbjct: 7 DDHRHMERALCLAERGAYTTRPNPMVGCVIVRDGEVVGEGWHQR--AGDP--HAEVFALC 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ A +RR+ +P G Sbjct: 63 AAGDLA-----RGATAYVTLEPCAHSGRTPPCAMALIDAGVRRVVAAMVDPFPLVNGGGV 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + G+ E ++R + + F Sbjct: 118 TLLRAAG----VTVEHGLMEAQARALNRGF 143 >gi|262373927|ref|ZP_06067204.1| riboflavin biosynthesis protein RibD [Acinetobacter junii SH205] gi|262310938|gb|EEY92025.1| riboflavin biosynthesis protein RibD [Acinetobacter junii SH205] Length = 366 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + + +M A++ A+ P VG V V + KII + K HAE+ A Sbjct: 9 LSENQYWMQQAIDLARRGQYSTKPNPNVGCVIVKDGKIIGEGFH----PKAGQPHAEVFA 64 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R E + YVTLEPC CA A+ A+++++ S+P Sbjct: 65 LRQAG-----ENAKDATAYVTLEPCAHFGRTPPCAEALVKAQVKKVVVACSDPNPLVAGK 119 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G + A E+ GI ++ ++ + F K Sbjct: 120 GVKILQDAG----IEVETGICDEEAKTLNFGFLKA 150 >gi|293610032|ref|ZP_06692333.1| hypothetical protein HMPREF0013_02182 [Acinetobacter sp. SH024] gi|292827264|gb|EFF85628.1| hypothetical protein HMPREF0013_02182 [Acinetobacter sp. SH024] Length = 361 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +K+ +M A+E A+ P VG V V ++++I + + K HAE+ A Sbjct: 4 LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGQGFH----PKAGQPHAEVFA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R E YVTLEPC CA A+ A+++++ +P Sbjct: 60 LREAG-----EHAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGK 114 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G Q + E+ GI E + ++ Q F K Sbjct: 115 GVQILE----NAGIEVEVGICEDLASKLNQGFLKA 145 >gi|295135421|ref|YP_003586097.1| bifunctional riboflavin biosynthesis protein RibD [Zunongwangia profunda SM-A87] gi|294983436|gb|ADF53901.1| bifunctional riboflavin biosynthesis protein RibD [Zunongwangia profunda SM-A87] Length = 348 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 19/150 (12%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ L+ A+N VG+V V N+II ++ HAE+ A+ Sbjct: 6 HEKYIKRCLQLAENGLGSTYPNPMVGSVIVYKNQIIGEGWHQKAGE----PHAEVNAVNS 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + ++++L + +YV+LEPC C+ I I+++ +P G + Sbjct: 62 ---VKNRDLLKKSTIYVSLEPCSHFGKTPPCSDLIIAKGIKKVVVATVDPFAEVAGRGIK 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A C ++ G+ EQ ++ + + FF Sbjct: 119 KLMEAGC----DVTLGVLEQEAQHLNKRFF 144 >gi|71066695|ref|YP_265422.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Psychrobacter arcticus 273-4] gi|71039680|gb|AAZ19988.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Psychrobacter arcticus 273-4] Length = 351 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 K FM A+E+A+ R VG V V +++ + + HAE+ A++ Sbjct: 11 KDRYFMMLAIEQAKLGLYSTRPNPAVGCVIVQAEEVVGQGFHPKVGQ----PHAEVFALK 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA A+ + + R+ +P G Sbjct: 67 DAG-----IRAVGATAYVTLEPCSHTGRTPPCAKALIESGVIRVVVAGLDPNPQVAGRGV 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + A E+ GI ++ + + F K R Sbjct: 122 RLLEQAG----IEVTVGILTAQAEVLNKGFLKAMR 152 >gi|294632878|ref|ZP_06711437.1| cytosine deaminase [Streptomyces sp. e14] gi|292830659|gb|EFF89009.1| cytosine deaminase [Streptomyces sp. e14] Length = 160 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 1/99 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + A+ A A + + P G++ + +++ A N R D+TAH E+ R Sbjct: 21 DETLLRRAIGIAARAVEQGDAPYGSLLAGPDGAVLAEAHNTVRRDDDITAHPELKLARWA 80 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 R L +V +Y + +PC MCA I + I R+ Y Sbjct: 81 ARELDPRTAADVTMYTSCQPCGMCAGGILRSGIGRVVYA 119 >gi|192359452|ref|YP_001983157.1| riboflavin biosynthesis protein RibD [Cellvibrio japonicus Ueda107] gi|190685617|gb|ACE83295.1| riboflavin biosynthesis protein RibD [Cellvibrio japonicus Ueda107] Length = 383 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 26/160 (16%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + + FM+ AL A+ +P VG V V N +II+ + HAE+ A Sbjct: 5 RDDHRFMARALRLAERGLYTT-MPNPRVGCVLVKNQQIIAEGWHVRAGEG----HAEVNA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 +R+ E YVTLEPC C+ A+ A + R+ Y +P Sbjct: 60 LRIAA-----EQARGATAYVTLEPCNHTGKTGPCSQALIDAGVARVVYAMEDPNPLVSGR 114 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 G + A E+ + E+++R + F + +R Sbjct: 115 GLERLAAAG----IEVDGPLFEEQARALNPGFITRMERKR 150 >gi|189424808|ref|YP_001951985.1| riboflavin biosynthesis protein RibD [Geobacter lovleyi SZ] gi|189421067|gb|ACD95465.1| riboflavin biosynthesis protein RibD [Geobacter lovleyi SZ] Length = 367 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 58/153 (37%), Gaps = 21/153 (13%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M A+ A+ R VG V V + I+ + K T HAE+ Sbjct: 3 TSDIAYMKRAISLARKGLGRTAPNPAVGCVIVCDGVIVGEGWH----KKAGTPHAEVH-- 56 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 ++ D+YVTLEPC C A+ A +RR+ G +P G Sbjct: 57 ---ALAMAGAAAKGADVYVTLEPCCHHGKTPPCCDALIAAGVRRVVAGMVDPFLQVAGKG 113 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q A + G+ EQ+ +++ + F K Sbjct: 114 LQTLRQAG----VRVEVGLLEQQCKELNKGFIK 142 >gi|30264187|ref|NP_846564.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. Ames] gi|47529628|ref|YP_020977.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. 'Ames Ancestor'] gi|49187016|ref|YP_030268.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. Sterne] gi|165871134|ref|ZP_02215784.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. A0488] gi|167633706|ref|ZP_02392030.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. A0442] gi|167639402|ref|ZP_02397673.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. A0193] gi|170687109|ref|ZP_02878327.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. A0465] gi|170705665|ref|ZP_02896128.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. A0389] gi|177652658|ref|ZP_02935074.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. A0174] gi|190566211|ref|ZP_03019130.1| riboflavin biosynthesis protein RibD [Bacillus anthracis Tsiankovskii-I] gi|196035025|ref|ZP_03102432.1| riboflavin biosynthesis protein RibD [Bacillus cereus W] gi|218905249|ref|YP_002453083.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH820] gi|227816888|ref|YP_002816897.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. CDC 684] gi|229603428|ref|YP_002868410.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. A0248] gi|254683878|ref|ZP_05147738.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. CNEVA-9066] gi|254721713|ref|ZP_05183502.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. A1055] gi|254736225|ref|ZP_05193931.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. Western North America USA6153] gi|254744115|ref|ZP_05201798.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. Kruger B] gi|254754105|ref|ZP_05206140.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. Vollum] gi|254758204|ref|ZP_05210231.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. Australia 94] gi|30258832|gb|AAP28050.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. Ames] gi|47504776|gb|AAT33452.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. 'Ames Ancestor'] gi|49180943|gb|AAT56319.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. Sterne] gi|164713053|gb|EDR18580.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. A0488] gi|167512461|gb|EDR87836.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. A0193] gi|167531112|gb|EDR93799.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. A0442] gi|170129205|gb|EDS98069.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. A0389] gi|170668726|gb|EDT19471.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. A0465] gi|172081993|gb|EDT67061.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. A0174] gi|190563130|gb|EDV17096.1| riboflavin biosynthesis protein RibD [Bacillus anthracis Tsiankovskii-I] gi|195992564|gb|EDX56525.1| riboflavin biosynthesis protein RibD [Bacillus cereus W] gi|218537200|gb|ACK89598.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH820] gi|227005412|gb|ACP15155.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. CDC 684] gi|229267836|gb|ACQ49473.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. A0248] Length = 370 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 56/158 (35%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ VGAV V + I+ + + HAE+ A+ Sbjct: 2 TDQEYMRIALQLAEGTCGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + ++R+ + NG Sbjct: 58 MAGDKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKEVKRVVIATLDCNPLVSGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 113 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 146 >gi|88803651|ref|ZP_01119175.1| riboflavin biosynthesis protein ribD [Polaribacter irgensii 23-P] gi|88780384|gb|EAR11565.1| riboflavin biosynthesis protein ribD [Polaribacter irgensii 23-P] Length = 354 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 62/160 (38%), Gaps = 22/160 (13%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + ++ L+ A+N R VGAV V I+ HAE+ A Sbjct: 1 MIRHEQYIQRCLQIAKNGIGTTRPNPSVGAVIVCKGVIVGEGFTAAYGGN----HAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + +++L E LYVTLEPC CA I I+R+ G + Sbjct: 57 VNS---VEHKKLLVESTLYVTLEPCSHFGKTPPCADLIIKYNIKRVVIGCVDTNSLVAGQ 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 G + A + G+ E R+ + FF +++R Sbjct: 114 GIERLKSAG----VVVTVGVLEAECRKHHKRFFVVQEKKR 149 >gi|56965745|ref|YP_177479.1| riboflavin biosynthesis protein RibD [Bacillus clausii KSM-K16] gi|56911991|dbj|BAD66518.1| riboflavin biosynthesis protein RibD [Bacillus clausii KSM-K16] Length = 367 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 25/150 (16%) Query: 5 NVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ A++ + P VG V V +II + AHAEI A+R Sbjct: 3 ERYMRLALDNAK--AMKGQTDPNPLVGCVLVKEGRIIGVGAHLKAGE----AHAEINALR 56 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC+ CA + A ++ + +P NG Sbjct: 57 MAG-----SEAKGSTAYVTLEPCSHTGRTGPCAVELVEAGVKEVIIATLDPNPLVSGNGV 111 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + H + GI E+ + Q+ F Sbjct: 112 RILEEGGVH----VQTGILEKEAVQLNDVF 137 >gi|46446676|ref|YP_008041.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus Protochlamydia amoebophila UWE25] gi|46400317|emb|CAF23766.1| probable diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus Protochlamydia amoebophila UWE25] Length = 368 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 45/154 (29%), Positives = 60/154 (38%), Gaps = 26/154 (16%) Query: 1 MKK---GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHA 54 MK + FM A+ E+ A L P VG V V + KII + AHA Sbjct: 1 MKNSEIHHTFMLEAIAESWKARLHA-PPNPWVGCVIVKDQKIIGKGY----TYPSGQAHA 55 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108 EI A++ E LYVTLEPC C AI A I +Y +P Sbjct: 56 EINALKSA-----SENAKGASLYVTLEPCSHHGKTPPCTEAIIRAGILNVYVALKDPDSR 110 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 G Q A H + GI E+ ++ ++ Sbjct: 111 VRGQGIQKLREAGIH----VKVGIGEKEAKVVLT 140 >gi|298244121|ref|ZP_06967927.1| CMP/dCMP deaminase zinc-binding [Ktedonobacter racemifer DSM 44963] gi|297551602|gb|EFH85467.1| CMP/dCMP deaminase zinc-binding [Ktedonobacter racemifer DSM 44963] Length = 170 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 8/146 (5%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M+ L A A + + + A+ ++I+ N+ +E +D HAE++ +R Sbjct: 12 DEKMMARTLAYANAALDKGSVGIAALLSRRDEILDLEHNQFQETRDAIDHAEMVVLRRMA 71 Query: 64 RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R LSQ E E+ LY +LEPC MC AAIS A ++R+ + A N G + T Sbjct: 72 RYLSQLSEEEKRELTLYSSLEPCLMCMAAISFAGLKRVVFSAYNADGTDEVTVARGLTSE 131 Query: 121 TCHHS-----PEIYPGISEQRSRQII 141 + + + G+ + R+I+ Sbjct: 132 QVNQALTRGPLTLLGGVQREEGREIL 157 >gi|228929160|ref|ZP_04092187.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228947830|ref|ZP_04110117.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228811817|gb|EEM58151.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228830450|gb|EEM76060.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 379 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 56/158 (35%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ VGAV V + I+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAEGTCGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + ++R+ + NG Sbjct: 67 MAGDKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKEVKRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 155 >gi|283851293|ref|ZP_06368575.1| riboflavin biosynthesis protein RibD [Desulfovibrio sp. FW1012B] gi|283573243|gb|EFC21221.1| riboflavin biosynthesis protein RibD [Desulfovibrio sp. FW1012B] Length = 383 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 57/154 (37%), Gaps = 23/154 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M FM+ AL A+ R + P VGAV V + I++ ++ HAE+ Sbjct: 1 MASDADFMARALVLAERG--RGFVTPNPRVGAVLVRDGAIVAEGWHKVFGG----PHAEV 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 + + +YVTLEPC C+ + AR+ R+ G +P Sbjct: 55 ECLHDAEKKGVDP--AGATMYVTLEPCNHFGKTPPCSRTLLDARVGRVVVGCLDPNP-VA 111 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + ++ G+ R I DF Sbjct: 112 GGGAELLRQGG----VDVTVGVLALECRDAIADF 141 >gi|257877850|ref|ZP_05657503.1| riboflavin biosynthesis protein RibD [Enterococcus casseliflavus EC20] gi|257812016|gb|EEV40836.1| riboflavin biosynthesis protein RibD [Enterococcus casseliflavus EC20] Length = 358 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 37/139 (26%), Positives = 53/139 (38%), Gaps = 19/139 (13%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N +M A+ EA+ + VGAV V ++I++ + HAE AI Sbjct: 2 HNEYMRLAIAEAKKGRYQTFTNPLVGAVIVKEQRVIAKGAHLVYGQ----PHAERNAIEQ 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E L LYVTLEPC C I + I+++ G +P G Q Sbjct: 58 ---CHFSEDLINSTLYVTLEPCNHQGKQPPCTQLIIDSGIKKVVIGQLDPNPIVAGQGKQ 114 Query: 116 FYTLATCHHSPEIYPGISE 134 F ++ GI E Sbjct: 115 FLEEQG----IDVLVGIEE 129 >gi|229104716|ref|ZP_04235378.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock3-28] gi|228678780|gb|EEL32995.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock3-28] Length = 379 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAKGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + ++R+ + NG Sbjct: 67 MAGEKAKN-----ATVYVTLEPCSHFGKTPPCCELLIEKGVKRIVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A ++ G+ E + + + FF K +R Sbjct: 122 KKLEEAG----IKVTTGVLETEAVLLNRYFFHYMKTKR 155 >gi|297567806|ref|YP_003686777.1| hypothetical protein Mesil_3462 [Meiothermus silvanus DSM 9946] gi|296852255|gb|ADH65269.1| hypothetical protein Mesil_3462 [Meiothermus silvanus DSM 9946] Length = 383 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 56/151 (37%), Gaps = 22/151 (14%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM ALE A R PVG V V +++ R + HAE+LA+R Sbjct: 6 DVAFMRQALELAAQGIGRTSPNPPVGCVLVRGAEVVGRGFHPRAGE----PHAEVLALRQ 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E Y+TLEPC CA A+ A + R+ ++P G + Sbjct: 62 AG-----ERAQGATAYITLEPCAHYGRTPPCAQALIEAGVARVVVATTDPNPQVSGRGLE 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A + G+ + + Q+ F+ Sbjct: 117 QLARAG----VAVTTGLLRDEAERQ-QEVFR 142 >gi|226506666|ref|NP_001147339.1| cytidine/deoxycytidylate deaminase family protein [Zea mays] gi|195610278|gb|ACG26969.1| cytidine/deoxycytidylate deaminase family protein [Zea mays] Length = 184 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 11/121 (9%) Query: 2 KKGNVFMSCALEEAQNAAL--RNEIPVGAVAVLNNKII---------SRAGNRNRELKDV 50 ++ ++ A++EA A P GAV V S + N R+ D Sbjct: 18 RRDYRLIAKAVDEAYRAVECDGGGYPFGAVVVRVGGGGGDGDDDEVVSSSHNSVRKDADP 77 Query: 51 TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 +AHAE+ AIR C+ L + L ++Y + EPC MC I LA+I+++ YGA + Sbjct: 78 SAHAEVTAIRQACKKLGKTSLSGCEIYTSCEPCPMCLGLIRLAKIKKVVYGAKSEVAAAA 137 Query: 111 E 111 Sbjct: 138 G 138 >gi|187927760|ref|YP_001898247.1| riboflavin biosynthesis protein RibD [Ralstonia pickettii 12J] gi|187724650|gb|ACD25815.1| riboflavin biosynthesis protein RibD [Ralstonia pickettii 12J] Length = 370 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 20/150 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M AL A+ P VG V V ++ +I + HAEI AI+ Sbjct: 6 DHAMMQRALALAEKGLFTT-TPNPRVGCVIVRDDTVIGEGYTQPAGQD----HAEIQAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + + YVTLEPC CA + A I R+ +P G Sbjct: 61 DA--QSRGQDVRGATAYVTLEPCSHFGRTPPCADRLVEAGITRVVAAMEDPNPAVSGRGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 Q A ++ G+ E+ +R++ F Sbjct: 119 QKLRDAG----VDVRCGLLEREARELNIGF 144 >gi|323527043|ref|YP_004229196.1| riboflavin biosynthesis protein RibD [Burkholderia sp. CCGE1001] gi|323384045|gb|ADX56136.1| riboflavin biosynthesis protein RibD [Burkholderia sp. CCGE1001] Length = 385 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 56/151 (37%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + V M AL A+ + P VG V V N ++I + HAEI A+ Sbjct: 4 QTDFVHMERALALAKRGMYTTDPNPRVGCVIVQNGEVIGEGFTQPAGQD----HAEIRAM 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + L +YVTLEPC CA A+ A++ R+ +P G Sbjct: 60 KDA--RSRGHDLRGATVYVTLEPCSHFGRTPPCANALIEAQVARVVAAMEDPNPQVSGRG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ ++++ F Sbjct: 118 LAMLRDAG----IEVRCGLLANEAQELNIGF 144 >gi|317486652|ref|ZP_07945469.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bilophila wadsworthia 3_1_6] gi|316922035|gb|EFV43304.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bilophila wadsworthia 3_1_6] Length = 116 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 7/110 (6%) Query: 43 RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG- 101 E D TAHAEI+AIR + L Q L + +L+ T EPC C AA A I R+YYG Sbjct: 1 MVFETLDPTAHAEIVAIRNATQKLGQLDLSDCELFTTCEPCPQCLAATYWAGISRIYYGI 60 Query: 102 --ASNPKGG--GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 N K G G + + + ++ E ++++ ++ K+ Sbjct: 61 TQEENVKMGFPGAKRMYEAFEKHGSDKQVVVFA--YEDICQKLMAEWLKK 108 >gi|157960990|ref|YP_001501024.1| riboflavin biosynthesis protein RibD [Shewanella pealeana ATCC 700345] gi|157845990|gb|ABV86489.1| riboflavin biosynthesis protein RibD [Shewanella pealeana ATCC 700345] Length = 373 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 57/153 (37%), Gaps = 21/153 (13%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + MS A+E AQ R VG+V V + +I+ + HAE+ A+ Sbjct: 5 EDSQMMSLAIELAQKGMYTTRPNPSVGSVIVKDGEIVGEGYHIRAGG----PHAEVYALN 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC CA A+ + R+ ++P G Sbjct: 61 MAG-----SDAKGATAYVTLEPCSHYGRTPPCAKALIEHGVSRVVIAVTDPNPEVSGRGI 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A ++ G+ + ++Q+ F K Sbjct: 116 AMLRDAGI--RVDV--GLMTEEAKQVNLGFLKR 144 >gi|157364177|ref|YP_001470944.1| CMP/dCMP deaminase zinc-binding [Thermotoga lettingae TMO] gi|157314781|gb|ABV33880.1| CMP/dCMP deaminase zinc-binding [Thermotoga lettingae TMO] Length = 209 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 13/109 (11%) Query: 18 AALRNEIPVGAVAVLN-NKIISRAGNRNRELK--------DVTAHAEILAIRMGCRILSQ 68 A +P+G V V IIS+ N E + AHAE+ A+ RI Sbjct: 14 ALKMGSLPIGCVIVNGSGNIISKGRNAIHESNFSGYPVFGNSIAHAELNALVSMKRIPDN 73 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + +Y ++EPC MC AI ++ IR + YG + G+ G Y Sbjct: 74 MEISDYVIYTSMEPCVMCFGAIYMSGIRNVVYGMKD----GVGGGLNLY 118 >gi|15837552|ref|NP_298240.1| riboflavin-specific deaminase [Xylella fastidiosa 9a5c] gi|9105878|gb|AAF83760.1|AE003934_2 riboflavin-specific deaminase [Xylella fastidiosa 9a5c] Length = 364 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 55/150 (36%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M AL A+ A P VG V V + +++ ++ D HAE+ A+ Sbjct: 7 DDYRHMERALCLAERGAYTTRPNPMVGCVIVRDGEVVGEGWHQR--AGDP--HAEVFALC 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ A +RR+ +P G Sbjct: 63 AAG-----DRARGATAYVTLEPCAHLGRTPPCAMALIDAGVRRVVAAMVDPFPLVNGGGV 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + G+ E ++R + + F Sbjct: 118 TLLRAAG----VTVEHGLMEAQARALNRGF 143 >gi|78046354|ref|YP_362529.1| riboflavin biosynthesis protein RibD (diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-[5-phosphoribosylamino]uracil reductase) [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034784|emb|CAJ22429.1| riboflavin biosynthesis protein RibD (Diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-[5-phosphoribosylamino]uracil reductase) [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 369 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL A+ A P VG V V + + ++ HAE+ A+R Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGG----PHAEVFALR 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ A + R+ ++P G Sbjct: 67 AAGELA-----RGATAYVTLEPCAHYGRTPPCALALIDAGVARVVAAMADPFPQVNGGGF 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ ++R + Q F Sbjct: 122 ALLREAG----IEVLSGVMHAQARTLNQGF 147 >gi|325124197|gb|ADY83720.1| bifunctional protein ribD [Acinetobacter calcoaceticus PHEA-2] Length = 361 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +K+ +M A+E A+ P VG V V ++++I + + K HAE+ A Sbjct: 4 LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGQGFH----PKAGQPHAEVFA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R E YVTLEPC CA A+ A+++++ +P Sbjct: 60 LREAG-----EHAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGK 114 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G Q + E+ GI E + ++ Q F K Sbjct: 115 GVQILK----NAGIEVEVGICEDLASKLNQGFLKA 145 >gi|323491728|ref|ZP_08096906.1| riboflavin-specific deaminase [Vibrio brasiliensis LMG 20546] gi|323314090|gb|EGA67176.1| riboflavin-specific deaminase [Vibrio brasiliensis LMG 20546] Length = 368 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 55/154 (35%), Gaps = 21/154 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + MS A+E A+ P VG V + +I+ + HAE+ A+ Sbjct: 6 SQDFKMMSRAIELAKGGIYTTAPNPNVGCVITRDGEIVGEGFHYRAGE----PHAEVHAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 RM YVTLEPC CA + A++ ++ +P G Sbjct: 62 RMAGEKS-----VGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMQDPNPQVAGRG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 Q A E+ G+ EQ + + F K Sbjct: 117 IQMLRDAG----IEVEVGLLEQDAINLNPAFIKR 146 >gi|65321502|ref|ZP_00394461.1| COG1985: Pyrimidine reductase, riboflavin biosynthesis [Bacillus anthracis str. A2012] Length = 370 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 56/158 (35%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ VGAV V + I+ + + HAE+ A+ Sbjct: 2 TDQEYMRIALQLAEGTCGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + ++R+ + NG Sbjct: 58 MAGDKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKEVKRVVIATLDCNPLVSGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 113 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 146 >gi|31335381|emb|CAD89884.1| riboflavin biosynthesis protein ribD [Bacillus cereus] Length = 209 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A+ Sbjct: 2 TDQXYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + ++R+ + NG Sbjct: 58 MAGDKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKEVKRVVIATLDCNPLVSGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E+ + + + FF K +R Sbjct: 113 KRLEEAG----IEVTTGVLEEEAVLLNRYFFHYMKTKR 146 >gi|298248927|ref|ZP_06972731.1| riboflavin biosynthesis protein RibD [Ktedonobacter racemifer DSM 44963] gi|297546931|gb|EFH80798.1| riboflavin biosynthesis protein RibD [Ktedonobacter racemifer DSM 44963] Length = 383 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 44/155 (28%), Positives = 61/155 (39%), Gaps = 30/155 (19%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTA-----HAE 55 FM A+ A + P VGAV V +N++I R T+ HAE Sbjct: 2 SDLEFMQQAIACAHSVEGHTSPRPAVGAVIVRDNRVIGRG---------ATSPPYGPHAE 52 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109 I A+ + DLY TLEPC C AI A IRR+ GA +P Sbjct: 53 IHALNEAGATAA----SGADLYTTLEPCCIAIHTPPCTKAIIAAGIRRVIIGALDPNPRV 108 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A + + GI++Q + +I+ F Sbjct: 109 SGRGVAQLREAGIN----VVTGIAQQETSALIRPF 139 >gi|301165384|emb|CBW24955.1| riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase] [Bacteriovorax marinus SJ] Length = 378 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 60/155 (38%), Gaps = 22/155 (14%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +K ++ A+ A + + P VG+V V +N II ++ HAE A Sbjct: 3 IKIDEQYIRRCFALAKKATGMTSPNPLVGSVIVQDNIIIGEGYHQRYGE----PHAEPNA 58 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIE 111 I E + LY LEPC C I ++I+R+ +P Sbjct: 59 INNAV-----EPVEGATLYCNLEPCCHTNKQTPPCVNKIIESKIKRVVISNLDPNPYVAG 113 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 NG + A + G+ E+ R++ + FFK Sbjct: 114 NGVKKLREAG----IAVSVGVLEEEGRELNEVFFK 144 >gi|145634121|ref|ZP_01789832.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae PittAA] gi|145268565|gb|EDK08558.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae PittAA] Length = 372 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 57/156 (36%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +VFM AL+ A P VG V V N +I+ + + HAE +A+ Sbjct: 6 SQDHVFMQRALDLATKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 E YVTLEPC CA + A + ++ +P G Sbjct: 62 AQAG-----ENAKGTTAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + A + + ++ +I + F K R Sbjct: 117 LKMLSDAGIESAVN----LLSDQAEKINKGFLKRMR 148 >gi|281347275|gb|EFB22859.1| hypothetical protein PANDA_015525 [Ailuropoda melanoleuca] Length = 353 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 67/177 (37%), Gaps = 46/177 (25%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ AQ AA R VGAV V ++++ HA ++ I + + Sbjct: 177 MERAVWAAQQAAARGLRAVGAVVVDPSSGRVLATGH-DCSSTASPLLHATMVCIDLVAQG 235 Query: 66 LSQ------------------------------------------EILPEVDLYVTLEPC 83 + + DLYVT EPC Sbjct: 236 QGRGAYDLGPYPACSFAPAVAPQGIRVGSVRKLEEDGDVHVDGLPYVCTGYDLYVTHEPC 295 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 MCA A+ +R++R++YGA +P G + + + +H +++ G+ E + R++ Sbjct: 296 AMCAMALVHSRVQRVFYGAPSPD-GALGTRFRIHARPDLNHRFQVFRGVLEAQCRRL 351 >gi|156977316|ref|YP_001448222.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio harveyi ATCC BAA-1116] gi|156528910|gb|ABU73995.1| hypothetical protein VIBHAR_06102 [Vibrio harveyi ATCC BAA-1116] Length = 201 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 21/146 (14%) Query: 5 NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM ALE + NA A + PVG V V + +I+S + HAE+ A++ Sbjct: 63 QQFMLRALEVSLNALPACQPNPPVGCVLVKDGEIVSEGHTQAIGGN----HAEVEALKA- 117 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + L +V YVTLEPC CA + I+++ +P G Sbjct: 118 ----YKGDLSDVTAYVTLEPCSFVGRTPACAKTLVTCGIKKVVVAMLDPDPRNAGRGIDI 173 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQ 142 E+ G+ + + + Sbjct: 174 LKEGG----VEVEIGLCGEEASAFLS 195 >gi|300789562|ref|YP_003769853.1| cytidine/deoxycytidine deaminase [Amycolatopsis mediterranei U32] gi|299799076|gb|ADJ49451.1| cytidine/deoxycytidine deaminase [Amycolatopsis mediterranei U32] Length = 141 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 3/110 (2%) Query: 1 MKK-GNVFMSCALEEAQNAALR-NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEIL 57 MK + A+E A+ A P G++ + KI++ N + D+TAH E+ Sbjct: 1 MKDTEETLLRRAIELAREAREEHGNPPFGSLLADADGKILAEDRNTSLTDNDITAHPELK 60 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 R + L E ++ + +PC MC AI + + R+ Y S + Sbjct: 61 LARWAAQNLDPETAAATTMFTSTQPCGMCTGAIERSGLGRVVYALSTEQF 110 >gi|260556402|ref|ZP_05828621.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii ATCC 19606] gi|260410457|gb|EEX03756.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii ATCC 19606] Length = 361 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +K+ +M A+E A+ P VG V V ++++I + K HAE+ A Sbjct: 4 LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFH----PKAGQPHAEVFA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R YVTLEPC CA A+ A+++++ +P Sbjct: 60 LRQAGEQAQ-----GATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGK 114 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G Q + E+ GI E + ++ Q F K Sbjct: 115 GVQILK----NAGIEVEIGICEDLAAKLNQGFLKA 145 >gi|269961115|ref|ZP_06175483.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269834066|gb|EEZ88157.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 159 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 55/146 (37%), Gaps = 21/146 (14%) Query: 5 NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM ALE ++NA A + PVG V V + +I+S + HAE+ A++ Sbjct: 21 QQFMLRALEVSRNALPACQPNPPVGCVLVKDGEIVSEGHTQAIGGN----HAEVEALKA- 75 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L +V YVTLEPC CA + I+++ +P G Sbjct: 76 ----YNGDLSDVTAYVTLEPCSFVGRTPACAKTLVTCGIKKVVVAMLDPDPRNAGRGIDI 131 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQ 142 E+ G+ + + Sbjct: 132 LKEGG----VEVEIGLCGEEVSAFLT 153 >gi|254498334|ref|ZP_05111073.1| cytidine and deoxycytidylate deaminase family protein [Legionella drancourtii LLAP12] gi|254352442|gb|EET11238.1| cytidine and deoxycytidylate deaminase family protein [Legionella drancourtii LLAP12] Length = 175 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 7/104 (6%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAI 59 K +M A++ A++ P A+ V N +I+S+ N + T H E++AI Sbjct: 31 KSDEYYMQIAIDLAKSNPKA---PFAALIVDNKTGEILSKGINA--SKVNPTFHGEMVAI 85 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + + +V LY T EPC+MC +A+ +I R+ + S Sbjct: 86 NNCVKEHPKVDWSQVTLYTTAEPCSMCQSAVVWTKISRVVFATS 129 >gi|325928452|ref|ZP_08189643.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xanthomonas perforans 91-118] gi|325541169|gb|EGD12720.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xanthomonas perforans 91-118] Length = 369 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL A+ A P VG V V + + ++ HAE+ A+R Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGG----PHAEVFALR 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ A + R+ ++P G Sbjct: 67 AAGELA-----RGATAYVTLEPCAHYGRTPPCALALIDAGVARVVAAMADPFPQVNGGGF 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ ++R + Q F Sbjct: 122 ALLREAG----IEVLSGVMHAQARTLNQGF 147 >gi|301781056|ref|XP_002925950.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-specific adenosine deaminase-like protein 3-like [Ailuropoda melanoleuca] Length = 371 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 67/177 (37%), Gaps = 46/177 (25%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ AQ AA R VGAV V ++++ HA ++ I + + Sbjct: 193 MERAVWAAQQAAARGLRAVGAVVVDPSSGRVLATGH-DCSSTASPLLHATMVCIDLVAQG 251 Query: 66 LSQ------------------------------------------EILPEVDLYVTLEPC 83 + + DLYVT EPC Sbjct: 252 QGRGAYDLGPYPACSFAPAVAPQGIRVGSVRKLEEDGDVHVDGLPYVCTGYDLYVTHEPC 311 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 MCA A+ +R++R++YGA +P G + + + +H +++ G+ E + R++ Sbjct: 312 AMCAMALVHSRVQRVFYGAPSPD-GALGTRFRIHARPDLNHRFQVFRGVLEAQCRRL 367 >gi|284045160|ref|YP_003395500.1| riboflavin biosynthesis protein RibD [Conexibacter woesei DSM 14684] gi|283949381|gb|ADB52125.1| riboflavin biosynthesis protein RibD [Conexibacter woesei DSM 14684] Length = 374 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 22/158 (13%) Query: 2 KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 + ++ ALE A A R + P VGAV + ++++ + HAE+ Sbjct: 7 DTDRLHLARALELA--AQGRGRVSPNPMVGAVITRDGEVVAEGWHSEYGA----PHAEVE 60 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AI L LYV+LEPC C AI A IRR+ + +P Sbjct: 61 AIAAAGDA----DLSGATLYVSLEPCCHTGKQPPCTDAILAAGIRRVVVASDDPTEKASG 116 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + G R+R + Q F K+ R Sbjct: 117 RGLGILRDEGVD--VAVAGGELAARARLLNQPFRKQAR 152 >gi|110598480|ref|ZP_01386751.1| riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase-like [Chlorobium ferrooxidans DSM 13031] gi|110339930|gb|EAT58434.1| riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase-like [Chlorobium ferrooxidans DSM 13031] Length = 369 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 55/154 (35%), Gaps = 23/154 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 V+M+ +E A + P VG+V V + II + HAE+ A Sbjct: 7 DDTVYMNRCIELALKGG--GTVSPNPMVGSVIVCDGVIIGEGFHERYGA----PHAEVNA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + QE+L LYV LEPC C+ I I R+ G +P Sbjct: 61 I---ASVADQELLRRSTLYVNLEPCSHFGKTPPCSDLIIEKGIPRVVVGCRDPFVSVAGK 117 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + G+ E ++ + F K Sbjct: 118 GI----AKLLGAGIAVTEGVLEAACVKLNEAFIK 147 >gi|239624449|ref|ZP_04667480.1| cytidine/deoxycytidylate deaminase family protein [Clostridiales bacterium 1_7_47_FAA] gi|239520835|gb|EEQ60701.1| cytidine/deoxycytidylate deaminase family protein [Clostridiales bacterium 1_7_47FAA] Length = 165 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 32/99 (32%), Positives = 41/99 (41%), Gaps = 2/99 (2%) Query: 9 SCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 CA E ++ + P GA+ I+ N T HAE + S Sbjct: 16 RCA-EISRESRAGGNTPFGALLADKEGNILLEQPNVEITENKCTGHAETQVAEKASQQYS 74 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 +E L + LY T EPC MCA AI A I R+ YG S Sbjct: 75 KEFLKDCTLYTTAEPCAMCAGAIYWAGIGRVVYGMSEKD 113 >gi|325288196|ref|YP_004263986.1| riboflavin biosynthesis protein RibD [Cellulophaga lytica DSM 7489] gi|324323650|gb|ADY31115.1| riboflavin biosynthesis protein RibD [Cellulophaga lytica DSM 7489] Length = 350 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 24/161 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MK ++ ++ A+N P VGA+ V NN II +HAE+ Sbjct: 1 MKIHEKYILRCIQIAKNGLGST-FPNPMVGALIVHNNAIIGEGFTSPYGG----SHAEVN 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AI I + +L E +YVTLEPC CA I +I + G +P Sbjct: 56 AINS---IKDKSVLKESTIYVTLEPCSHYGKTPPCADLIIKHKIPNIVIGLKDPHEKVAG 112 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQD---FFKERR 149 NG + A C+ + G+ E+ R+ F++++R Sbjct: 113 NGIKKLRAAGCN----VTIGVLEEECREHHNRFLCFYEKKR 149 >gi|319778563|ref|YP_004129476.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Taylorella equigenitalis MCE9] gi|317108587|gb|ADU91333.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Taylorella equigenitalis MCE9] Length = 379 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 16/148 (10%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A E + L + P VG V V N++II + HAEI+A++ Sbjct: 1 MRLAYEASLKTRFLPDPNPCVGCVIVHNDEIIGEGATQIAGSH----HAEIMALKDARMR 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 ++++ + LYVTLEPC C A+ I+ + + +P NG + Sbjct: 57 GHEDLIADAILYVTLEPCSHFGRTPPCTDALISNGIKHVVIASPDPNPIVGGNGIRILRS 116 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 E+ G + ++ FF Sbjct: 117 NGI--KVEV--GFMLEEVLELNLGFFSR 140 >gi|219682366|ref|YP_002468750.1| riboflavin deaminase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219622099|gb|ACL30255.1| riboflavin deaminase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086187|gb|ADP66269.1| riboflavin deaminase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086763|gb|ADP66844.1| riboflavin deaminase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087351|gb|ADP67431.1| riboflavin deaminase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087851|gb|ADP67930.1| riboflavin deaminase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 141 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 39/152 (25%), Positives = 56/152 (36%), Gaps = 29/152 (19%) Query: 8 MSCALEEAQNAALRNEI-----P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M A+E ++ E P VG V V NN I+ ++ HAEI A+ M Sbjct: 1 MKRAIELSKL----GEFTTAPNPNVGCVIVKNNIIVGEGWHKQAGKN----HAEINALIM 52 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC C A+ + I R+ +P NG Sbjct: 53 AGEKAQ-----GGTAYVTLEPCNHFGKTPPCCNALIKSGINRVVISNIDPNPKISGNGIL 107 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + H + G+ + S+Q + FFK Sbjct: 108 YLKK----HGICVKTGLLSKESKQYNKGFFKR 135 >gi|134102530|ref|YP_001108191.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338] gi|291007103|ref|ZP_06565076.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338] gi|133915153|emb|CAM05266.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338] Length = 188 Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 54/152 (35%), Gaps = 33/152 (21%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM+ A+ A + + P GAV +I++R NR D TAH E+ AIR Sbjct: 2 NDEEFMAEAVRLATESVVNGWGGPFGAVITDGERIVARGQNRVLLTGDPTAHGEVEAIRK 61 Query: 62 GCRILSQE--------------------------------ILPEVDLYVTLEPCTMCAAA 89 ++L+ + +L +Y + PC MC +A Sbjct: 62 AVQVLNPDAPSIAEERQNGSTLALVPRPEGSSDPMPARARMLKGHSIYTSGAPCPMCMSA 121 Query: 90 ISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 I +R+ ++Y + I F Sbjct: 122 IYWSRLDAVHYSSDLESTRAIGFDDAFQYEDR 153 >gi|81299014|ref|YP_399222.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Synechococcus elongatus PCC 7942] gi|81167895|gb|ABB56235.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Synechococcus elongatus PCC 7942] Length = 368 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 21/151 (13%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M LE A AA + VG + V +I+ + HAE+ A+ Sbjct: 3 DRDRQYMQRCLELAAQAAGQTAPNPMVGCIIVQGEEIVGEGFH--PAAGQP--HAEVFAL 58 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + LYV LEPC C+ A+ A ++R+ G +P G Sbjct: 59 RQAG-----DRARGATLYVNLEPCNHYGRTPPCSEAVVAAGLKRVVVGMVDPDPRVAGGG 113 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ + Q+ + F Sbjct: 114 IARLQQAG----IEVTVGVEQAACEQMNEAF 140 >gi|261253738|ref|ZP_05946311.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio orientalis CIP 102891] gi|260937129|gb|EEX93118.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio orientalis CIP 102891] Length = 368 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 21/153 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + MS A+E A+ P VG V V ++I+ + HAE+ A+R Sbjct: 7 QDFTMMSRAIELAKGGIYTTAPNPNVGCVIVQGDEIVGEGFHYRAGE----PHAEVHALR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + YVTLEPC CA + A++ ++ +P G Sbjct: 63 MAG-----DRAVGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMEDPNPKVAGRGI 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 Q A + G+ EQ++ + F K+ Sbjct: 118 QMLRDAG----ITVEVGLLEQQAESLNPAFIKQ 146 >gi|145630038|ref|ZP_01785820.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae R3021] gi|144984319|gb|EDJ91742.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae R3021] Length = 372 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 57/156 (36%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +VFM AL+ A P VG V V N +I+ + + HAE +A+ Sbjct: 6 SQDHVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERIAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 E YVTLEPC CA + A + ++ +P G Sbjct: 62 AQAG-----ENAKGTTAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + A + + ++ +I + F K R Sbjct: 117 LKMLSDAGIESAVN----LLNDQAEKINKGFLKRMR 148 >gi|3378525|emb|CAA08869.1| riboflavin-specific deaminase [Thermotoga neapolitana] Length = 241 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 46/110 (41%), Gaps = 13/110 (11%) Query: 5 NVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A+E A+ R PVGAV V +IIS + + HAE +AI Sbjct: 3 ERFMKRAIELAKKGLGRVNPNPPVGAVVVKEGRIISEGFHPLFLVG---PHAERVAIESA 59 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106 R E L L VTLEPC C I + I+++ G +P Sbjct: 60 KRK--GEDLTGTTLVVTLEPCDHHGKTPPCTDLIIESGIKKVVIGMRDPN 107 >gi|5262786|emb|CAB45891.1| putative protein [Arabidopsis thaliana] gi|7268893|emb|CAB79096.1| putative protein [Arabidopsis thaliana] gi|45268463|gb|AAS55854.1| pyrimidine deaminase [synthetic construct] Length = 363 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 60/150 (40%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M +E A+ A + P VG V V + I+ + + K HAE+ A+R Sbjct: 10 DDSFYMRKCVELAKRAIGCTSPNPMVGCVIVKDGDIVGQGFH----PKAGQPHAEVFALR 65 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YV+LEPC C A+ A++RR+ G +P +G Sbjct: 66 DAGELAEN-----ATAYVSLEPCNHYGRTPPCTEALIKAKVRRVVIGMVDPNPIVFSSGI 120 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ + E+ +++ + F Sbjct: 121 SRLKDAG----IDVTVSVEEELCKKMNEGF 146 >gi|15617059|ref|NP_240272.1| riboflavin deaminase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681811|ref|YP_002468197.1| riboflavin deaminase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471513|ref|ZP_05635512.1| riboflavin deaminase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|25403627|pir||F84983 diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) [imported] - Buchnera sp. (strain APS) gi|10039124|dbj|BAB13158.1| riboflavin deaminase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219624654|gb|ACL30809.1| riboflavin deaminase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 141 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 39/152 (25%), Positives = 55/152 (36%), Gaps = 29/152 (19%) Query: 8 MSCALEEAQNAALRNEI-----P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M A+E ++ E P VG V V NN I+ + HAEI A+ M Sbjct: 1 MKRAIELSKL----GEFTTAPNPNVGCVIVKNNIIVGEGWHEQAGKN----HAEINALIM 52 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC C A+ + I R+ +P NG Sbjct: 53 AGEKAQ-----GGTAYVTLEPCNHFGKTPPCCNALIKSGINRVVISNIDPNPKISGNGIL 107 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + H + G+ + S+Q + FFK Sbjct: 108 YLKK----HGICVKTGLLSKESKQYNKGFFKR 135 >gi|295696432|ref|YP_003589670.1| riboflavin biosynthesis protein RibD [Bacillus tusciae DSM 2912] gi|295412034|gb|ADG06526.1| riboflavin biosynthesis protein RibD [Bacillus tusciae DSM 2912] Length = 371 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 25/155 (16%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +M AL+ A A+ R + P VGAV V + +++ + + HAE+ A Sbjct: 2 TDEDWMRWALQLA--ASARGQTSPNPMVGAVIVKDGELVGQGAHLKAGG----PHAEVHA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM +YVTLEPC C+ A+ + R+ +P Sbjct: 56 LRMAGEKA-----RGATVYVTLEPCDHHGRTPPCSRALIEHGVARVVVAMVDPNPLVAGG 110 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G + A ++ G+ E+ +R + + F + Sbjct: 111 GIRRLRQAG----VKVEVGLLEKDARALNRGFIQR 141 >gi|238927494|ref|ZP_04659254.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Selenomonas flueggei ATCC 43531] gi|238884776|gb|EEQ48414.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Selenomonas flueggei ATCC 43531] Length = 386 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 40/151 (26%), Positives = 57/151 (37%), Gaps = 21/151 (13%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M AL A+ A R P VGA+ V + + + +R HAEI A+ Sbjct: 22 ETDESYMREALHLAEFARGRTSPNPLVGALIVRDGIVAASGWHRAAGE----PHAEIHAL 77 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 RM + LYVTLEPC CA A+ A I R+ +P G Sbjct: 78 RMAGELA-----RGATLYVTLEPCAHQGRTGPCAKAVIAAGITRVVVALRDPNPLVAGRG 132 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ +R+ F Sbjct: 133 IAMLEAAG----IEVVTGVCAAEARRQNAAF 159 >gi|309780821|ref|ZP_07675562.1| riboflavin biosynthesis protein RibD [Ralstonia sp. 5_7_47FAA] gi|308920503|gb|EFP66159.1| riboflavin biosynthesis protein RibD [Ralstonia sp. 5_7_47FAA] Length = 370 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 20/150 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M AL A+ P VG V V ++ +I + HAEI AI+ Sbjct: 6 DHAMMQRALALAEKGLFTT-TPNPRVGCVIVRDDTVIGEGYTQPAGQD----HAEIQAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + + YVTLEPC CA + A I R+ +P G Sbjct: 61 DA--QSRGQDVRGATAYVTLEPCSHFGRTPPCADRLVEAGIARVVAAMEDPNPAVSGRGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 Q A ++ G+ E+ +R++ F Sbjct: 119 QKLRDAG----VDVRCGLLEREARELNIGF 144 >gi|271969361|ref|YP_003343557.1| guanine deaminase [Streptosporangium roseum DSM 43021] gi|270512536|gb|ACZ90814.1| guanine deaminase [Streptosporangium roseum DSM 43021] Length = 157 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 3/91 (3%) Query: 11 ALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 AL A+ IP + V ++ NR R +D TAHAEI+A+R R Sbjct: 19 ALATAE--VHAGGIPFAGLVVDGTGTVLGSGVNRVRAHRDPTAHAEIVALREAAREHGPH 76 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L L + EPC +C + + R+ + Sbjct: 77 ALAGTTLLASGEPCPLCYVTALWSGVSRIVF 107 >gi|93007294|ref|YP_581731.1| riboflavin biosynthesis protein RibD [Psychrobacter cryohalolentis K5] gi|92394972|gb|ABE76247.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Psychrobacter cryohalolentis K5] Length = 370 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 59/155 (38%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 K + FM A+E+A+ R VG V V +++ + + K HAE+ A++ Sbjct: 30 KDHYFMMLAIEQAKLGLYTARPNPAVGCVIVQAEEVVGQGFH----PKAGQPHAEVFALK 85 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA A+ + + R+ +P G Sbjct: 86 DAG-----IRTVGATAYVTLEPCSHTGRTPPCAKALIESGVIRVVVAGLDPNPQVAGRGV 140 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + A + G+ + ++ + + F K R Sbjct: 141 KLLEQAG----IAVSVGVLKTQAEALNKGFLKAMR 171 >gi|94500359|ref|ZP_01306891.1| riboflavin-specific deaminase/reductase [Oceanobacter sp. RED65] gi|94427394|gb|EAT12372.1| riboflavin-specific deaminase/reductase [Oceanobacter sp. RED65] Length = 370 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 55/155 (35%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M FM+ A++ A+ + P VG V V II + HAE+ A Sbjct: 1 MPSHIDFMARAIQLAKQGLYSTDPNPRVGCVLVKEGNIIGEGYHVRAGEG----HAEVNA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + YVTLEPC C+ + A IR L +P Sbjct: 57 L-----AQAGSAAQGATAYVTLEPCSHFGRTPPCSDTLIKAGIRTLVCAMQDPNPEVSGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G + A EI G+ E ++++ F K Sbjct: 112 GFEKMRAAG----IEIISGVLESEAKKLNPGFIKR 142 >gi|316978726|gb|EFV61670.1| serine/threonine-protein phosphatase PP1 [Trichinella spiralis] Length = 537 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 32/159 (20%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +M ++ A+ + ++ VG V +IS A N + ++ HA + AI + Sbjct: 142 DRYMRMCIDSAKKV--KGQVGVGCAIVEPKTGTVISVA-NNSLASENPIQHAVMCAIDLV 198 Query: 63 CRILSQEILP--------------------------EVDLYVTLEPCTMCAAAISLARIR 96 + L D YVT EPC MC+ A+ +RIR Sbjct: 199 AEFQGGKPLSRQCSGVLHAEKDQLSPDSGSCFYLCTGFDCYVTREPCAMCSMALLHSRIR 258 Query: 97 RLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 R++YG G + + + L + +H +++ I E Sbjct: 259 RVFYGYP-VNHGALGSAAMIHMLKSSNHRFDVFKEILED 296 >gi|311896167|dbj|BAJ28575.1| putative deaminase [Kitasatospora setae KM-6054] Length = 146 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + A+E A A + P G++ + +++ A N R +D+TAH E+ R Sbjct: 6 DEALLRRAVELAARAVESGDAPYGSLLAGADGAVLAEAHNTVRRERDITAHPELKLARWA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 R L LY + +PC MCA A+ + + R+ + S Sbjct: 66 ARELEPAEAARTTLYTSCQPCGMCAGALVRSGLGRVVFALS 106 >gi|319785885|ref|YP_004145360.1| cytosine deaminase [Pseudoxanthomonas suwonensis 11-1] gi|317464397|gb|ADV26129.1| Cytosine deaminase [Pseudoxanthomonas suwonensis 11-1] Length = 158 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 13/146 (8%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ A+EEA+ IP+GA + ++ R NR + D + H E A R Sbjct: 6 DHRAMLAIAVEEARQGLAEGGIPIGAALFAADGTLLGRGHNRRVQENDPSVHGETDAFRK 65 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R S + + TL PC C+ + I + G + GG + Sbjct: 66 AGRQRS---YRDTIMVTTLSPCWYCSGLVRQFGIGTVVMGEAVNFQGG----HDWLREQG 118 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147 E+ + + +++ D+ Sbjct: 119 ----VEVVD-LDDDECIRMLGDWIAA 139 >gi|262340928|ref|YP_003283783.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272265|gb|ACY40173.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 343 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 43/153 (28%), Positives = 62/153 (40%), Gaps = 19/153 (12%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 MK FMS A++ A+N P VG V N IIS + + + HAE +A Sbjct: 1 MKDKETFMSRAIQLAKNGLGMTSPNPMVGCVIERNGFIISEGWHYKKGMD----HAEAIA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 I RI ++ + + LYVTLEPC C I I R+ G +P Sbjct: 57 IN---RIKNKSLFLDSTLYVTLEPCVHFGETSPCVDLIIKNHIPRIVVGIQDPHDKVKGL 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G Q E+ + + + R + + FF Sbjct: 114 GIQKLKEYG----IEVIENVLKNKCRFLNKRFF 142 >gi|163961159|gb|ABY50083.1| cytosine deaminase [Candida tropicalis] Length = 120 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 10/120 (8%) Query: 29 VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88 + + K++ + N + H E+ A+ R+ + + +Y TL PC MC Sbjct: 1 IISSDGKVLGKGHNERIQKGSAILHGEMSALEDAGRLPGKAY-KDCTIYTTLSPCNMCTG 59 Query: 89 AISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 AI L I+R+ G N G E+ + + + + + ++I+ F KER Sbjct: 60 AILLYGIKRVVMG-ENVNFQGAEDLLRANGVEVIN--------LDDNDCKEIMSKFIKER 110 >gi|152966031|ref|YP_001361815.1| cytosine deaminase [Kineococcus radiotolerans SRS30216] gi|151360548|gb|ABS03551.1| Cytosine deaminase [Kineococcus radiotolerans SRS30216] Length = 165 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 13/142 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + ALE+A+ A +P+GA L+ ++ NR + D + H E A R R Sbjct: 23 LDVALEQARAGAAEGGVPIGAALFTLDGTLLGAGRNRRVQDDDPSVHGETDAFRNAGRRA 82 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 S + TL PC C+ + I L G S GG + H Sbjct: 83 S---YRHTVMVTTLSPCWYCSGLVRQFGIGHLLVGESTTFTGGHAWLAE--------HGV 131 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 + + + R R ++ F ++R Sbjct: 132 SVTV-LDDDRCRALMTTFIEQR 152 >gi|153833299|ref|ZP_01985966.1| riboflavin biosynthesis protein RibD [Vibrio harveyi HY01] gi|148870435|gb|EDL69356.1| riboflavin biosynthesis protein RibD [Vibrio harveyi HY01] Length = 159 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 55/146 (37%), Gaps = 21/146 (14%) Query: 5 NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM ALE ++NA A + PVG V V + +I+S + HAE+ A++ Sbjct: 21 QQFMLRALEVSRNALPACQPNPPVGCVLVKDGEIVSEGHTQAIGGN----HAEVEALKA- 75 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L +V YVTLEPC CA + I+++ +P G Sbjct: 76 ----YNGDLSDVTAYVTLEPCSFVGRTPACAKTLVTCGIKKVVVAMLDPDLRNAGRGIDI 131 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQ 142 E+ G+ + + Sbjct: 132 LKEGG----VEVEIGLCGEEVSAFLT 153 >gi|228940450|ref|ZP_04103019.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228979928|ref|ZP_04140248.1| Riboflavin biosynthesis protein [Bacillus thuringiensis Bt407] gi|228779807|gb|EEM28054.1| Riboflavin biosynthesis protein [Bacillus thuringiensis Bt407] gi|228819215|gb|EEM65271.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 348 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +N+I+ + HAEI AIRM E +YVTLEPC+ Sbjct: 11 VGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMAG-----EQARGATIYVTLEPCSH 61 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA AI A I+++ +P G + A E+ G+ E+ S++ Sbjct: 62 YGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAG----IEVLVGVCEEESKK 117 Query: 140 IIQDF 144 + + F Sbjct: 118 MNEVF 122 >gi|304437387|ref|ZP_07397346.1| riboflavin biosynthesis protein RibD [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369643|gb|EFM23309.1| riboflavin biosynthesis protein RibD [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 367 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 40/151 (26%), Positives = 57/151 (37%), Gaps = 21/151 (13%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M AL A+ A R P VGA+ V + + + +R HAEI A+ Sbjct: 3 ETDESYMREALHLAEFARGRTSPNPLVGALIVRDGIVAASGWHRAAGE----PHAEIHAL 58 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 RM + LYVTLEPC CA A+ A I R+ +P G Sbjct: 59 RMAGELA-----RGATLYVTLEPCAHQGRTGPCAKAVIAAGITRVVVALRDPNPLVAGRG 113 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ +R+ F Sbjct: 114 IAMLEAAG----IEVVTGVCAAEARRQNAAF 140 >gi|229128665|ref|ZP_04257643.1| Riboflavin biosynthesis protein [Bacillus cereus BDRD-Cer4] gi|228654858|gb|EEL10718.1| Riboflavin biosynthesis protein [Bacillus cereus BDRD-Cer4] Length = 348 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 19/125 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +N+I+ + HAEI AIRM E + +YVTLEPC+ Sbjct: 11 VGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMAG-----EQVRGATIYVTLEPCSH 61 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA AI A I+++ +P G + A E+ G+ E+ S++ Sbjct: 62 HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAG----IEVLVGVCEEESKK 117 Query: 140 IIQDF 144 + + F Sbjct: 118 MNEVF 122 >gi|150019955|ref|YP_001305309.1| riboflavin biosynthesis protein RibD [Thermosipho melanesiensis BI429] gi|149792476|gb|ABR29924.1| riboflavin biosynthesis protein RibD [Thermosipho melanesiensis BI429] Length = 337 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 25/152 (16%) Query: 5 NVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+E ++ ++ P VGAV V N KII + HAE AI Sbjct: 2 EKYMKLAIELSKKG--IGKVSPNPLVGAVIVKNGKIIGMGYHERYGG----FHAERNAIL 55 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 +E + L+V LEPC C I + I ++Y + +P G Sbjct: 56 NA-----KEDVKGSSLFVNLEPCSHHGKNLPCVDLIISSGISKVYIASVDPNPLVNGKGI 110 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + E+ G+ ++ + + FFK Sbjct: 111 EKLKKNG----IEVDVGLLSDEAKYLNRVFFK 138 >gi|229174066|ref|ZP_04301602.1| Riboflavin biosynthesis protein [Bacillus cereus MM3] gi|228609398|gb|EEK66684.1| Riboflavin biosynthesis protein [Bacillus cereus MM3] Length = 350 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 19/125 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +N+I+ + HAEI AIRM E +YVTLEPC+ Sbjct: 11 VGSVIVNDNRIVGIGAHMKAGE----PHAEIHAIRMAG-----EQARGGTIYVTLEPCSH 61 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA AI A I+++ +P +G + A E+ G+ E+ S++ Sbjct: 62 HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGSGIKILQDAG----IEVLVGVCEEESKK 117 Query: 140 IIQDF 144 + + F Sbjct: 118 MNEVF 122 >gi|294627697|ref|ZP_06706279.1| 5-amino-6-uracil reductase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598049|gb|EFF42204.1| 5-amino-6-uracil reductase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 369 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL A+ A P VG V V + + ++ HAE+ A+R Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGG----PHAEVFALR 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ A + R+ ++P G Sbjct: 67 AAGELA-----RGATAYVTLEPCAHYGRTPPCALALIEAGVMRVVAAMADPFPQVNGGGF 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ + ++R + + F Sbjct: 122 ALLREAG----IDVLSGVMQAQARTLNRGF 147 >gi|57102218|ref|XP_542193.1| PREDICTED: similar to CG10927-PA [Canis familiaris] Length = 355 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 61/159 (38%), Gaps = 46/159 (28%) Query: 26 VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ--------------- 68 VGAV V ++++ + + HA ++ I + + + Sbjct: 195 VGAVVVDPSSGRVLATGHDCSNAA-SPLLHATMVCIDLVAQGQGRGAYDLGPYPACSFVP 253 Query: 69 ---------------------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + DLY+T EPC MCA A+ +R++R++YG Sbjct: 254 AVTPQSVRVGSVRKLDEDGDMHDDSVPYVCTGYDLYITREPCAMCAMALVHSRVQRVFYG 313 Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 A +P G + + + +H +++ G+ E + R++ Sbjct: 314 APSPD-GALGTRFRIHARPDLNHRFQVFRGVLEAQCRRL 351 >gi|330899666|gb|EGH31085.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. japonica str. M301072PT] Length = 301 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 53/152 (34%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A+ VG V V +I+ + HAE+ A+R Sbjct: 9 DVHYMARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGE----PHAEVHALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A + + +P G Sbjct: 65 AGELA-----RGATAYVTLEPCSHQGRTPPCADALIEAGLTGVVAAMQDPNPEVSGRGL- 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L + + G+ E +R + + F K Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147 >gi|167630209|ref|YP_001680708.1| riboflavin biosynthesis protein ribd [Heliobacterium modesticaldum Ice1] gi|167592949|gb|ABZ84697.1| riboflavin biosynthesis protein ribd [Heliobacterium modesticaldum Ice1] Length = 374 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 19/126 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VGAV V + ++I +R K T HAE+ A+R LYVTLEPC Sbjct: 29 VGAVVVKDGRVIGEGYHR----KAGTPHAEVHALRQAGEAAC-----GGTLYVTLEPCNH 79 Query: 84 ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C AI A+I R+ ++P G A E+ G+ + Sbjct: 80 HGRTPPCTEAIIAAKISRVVAAVADPNPQVAGQGFARLREAG----IEVDVGVMADAAIT 135 Query: 140 IIQDFF 145 I Q FF Sbjct: 136 INQPFF 141 >gi|167623139|ref|YP_001673433.1| riboflavin biosynthesis protein RibD [Shewanella halifaxensis HAW-EB4] gi|167353161|gb|ABZ75774.1| riboflavin biosynthesis protein RibD [Shewanella halifaxensis HAW-EB4] Length = 373 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 57/153 (37%), Gaps = 21/153 (13%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + MS A+E AQ R VG+V V + +I+ + HAE+ A+ Sbjct: 5 EDSQMMSLAIELAQKGMYTTRPNPSVGSVIVKDGEIVGEGYHIRAGG----PHAEVYALN 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC CA A+ + R+ ++P G Sbjct: 61 MAGA-----DAKGATAYVTLEPCSHYGRTPPCAKALIEHGVSRVVIAVTDPNPEVSGRGI 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A ++ G+ + ++Q+ F K Sbjct: 116 AMLRDAGI--RVDV--GLMTEEAKQVNLGFLKR 144 >gi|294667125|ref|ZP_06732350.1| 5-amino-6-uracil reductase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603135|gb|EFF46561.1| 5-amino-6-uracil reductase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 369 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL A+ A P VG V V + + ++ HAE+ A+R Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGACVGEGFHQRAGG----PHAEVFALR 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ A + R+ ++P G Sbjct: 67 AAGELA-----RGATAYVTLEPCAHYGRTPPCALALIEAGVMRVVAAMADPFPQVNGGGF 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ + ++R + + F Sbjct: 122 ALLREAG----IDVLSGVMQAQARTLNRGF 147 >gi|282896327|ref|ZP_06304349.1| Riboflavin biosynthesis protein RibD [Raphidiopsis brookii D9] gi|281198823|gb|EFA73702.1| Riboflavin biosynthesis protein RibD [Raphidiopsis brookii D9] Length = 376 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 60/152 (39%), Gaps = 21/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++ + M L+ A+ A R P VGAV V + +I+ + H E+ A Sbjct: 14 IEFDALMMQRCLQLARLALGRTSPNPLVGAVVVKDGEIVGEGFHPRAGE----PHGEVFA 69 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R E +YV+LEPC C+ ++ A + ++ G +P Sbjct: 70 LRAAG-----ERARGATIYVSLEPCNHYGRTPPCSLSLINAGVAKVVVGMVDPNPLVAGA 124 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A E+ G+ E+ +++ + F Sbjct: 125 GIARLRAAG----IEVIVGVEEEACQKLNEGF 152 >gi|221135084|ref|ZP_03561387.1| riboflavin biosynthesis protein RibD [Glaciecola sp. HTCC2999] Length = 381 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 40/154 (25%), Positives = 58/154 (37%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M+ AL A+ P VG V L+ +II ++ + TAHAE+ A+ Sbjct: 9 DYAMMARALRLAKQGIYTAAPNPMVGCVITLDGEIIGEGHHQ----QAGTAHAEVNALWQ 64 Query: 62 -----GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 L L E YVTLEPC+ CA A+ A I R+ +P Sbjct: 65 VNELIAQGKLVATQLKEATAYVTLEPCSHTGRTGPCADALIDAYIGRVVIAMQDPYSQVS 124 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G L + E+ G+ S + + F Sbjct: 125 GRG--IAKLQRANIQVEV--GLLAAESNALNRHF 154 >gi|78219882|gb|ABB39231.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 363 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 54/145 (37%), Gaps = 19/145 (13%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ A+ + P VGAV V + + ++R + HAEI +R R Sbjct: 1 MLEAVALAEKGRWATSPNPCVGAVLVKDGQTVARGWHTAYGK----PHAEIECLRDAARR 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E L VTLEPC C+ A+ A IR + G +P G F Sbjct: 57 GVNP--AECTLVVTLEPCNHTGKTPPCSIAVLQAGIRHVVVGMMDPNPVAQG-GANFLRE 113 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 + G+ Q ++ DF Sbjct: 114 NG----VTVETGVCRQECEDVVDDF 134 >gi|288941493|ref|YP_003443733.1| riboflavin biosynthesis protein RibD [Allochromatium vinosum DSM 180] gi|288896865|gb|ADC62701.1| riboflavin biosynthesis protein RibD [Allochromatium vinosum DSM 180] Length = 381 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M+ A+ A+ + P VG V V + +++ +R HAE LA+ Sbjct: 13 DDRLHMARAIGLAERGRYTTDPNPRVGCVLVRDGQVVGEGWHRRAGE----PHAEPLALA 68 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E + +YVTLEPC CA A+ A + R+ +P G Sbjct: 69 QAG-----ERARDATVYVTLEPCSHHGRTPPCAEALIAAGVARVVCAMVDPNPRVAGRGV 123 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + A + G E +R + F K Sbjct: 124 ERLRQAG----ISVDVGCLESEARALNPGFVKR 152 >gi|56751317|ref|YP_172018.1| riboflavin biosynthesis protein RibD [Synechococcus elongatus PCC 6301] gi|56686276|dbj|BAD79498.1| riboflavin biosynthesis protein RibD [Synechococcus elongatus PCC 6301] Length = 368 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 21/151 (13%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M LE A AA + VG + V +I+ + HAE+ A+ Sbjct: 3 DRDRQYMQRCLELAAQAAGQTAPNPMVGCIIVQGEEIVGEGFH--PAAGQP--HAEVFAL 58 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + LYV LEPC C+ A+ A ++R+ G +P G Sbjct: 59 RQAG-----DRARGATLYVNLEPCNHYGRTPPCSEAVVAAGLKRVVVGMVDPDPRVTGGG 113 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ + Q+ + F Sbjct: 114 IARLQQAG----IEVTVGVEQAACEQMNEAF 140 >gi|168059034|ref|XP_001781510.1| predicted protein [Physcomitrella patens subsp. patens] gi|162667051|gb|EDQ53690.1| predicted protein [Physcomitrella patens subsp. patens] Length = 155 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 54/145 (37%), Gaps = 21/145 (14%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A+ EA+ + IP+GA +++ R NR + D + HAE A R R Sbjct: 2 LDVAIAEARTGLGEDGIPIGAALFDAGGQLLGRGRNRRVQENDPSVHAETDAFRKAGRQR 61 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLATC 122 S + + TL PC C+ + I + G + GG+ ENG Q L + Sbjct: 62 S---YRDTIMVTTLAPCWYCSGLVRQFNIGTVVVGETVNFQGGVAWLRENGVQVVDLQS- 117 Query: 123 HHSPEIYPGISEQRSRQIIQDFFKE 147 + I+ F Sbjct: 118 ------------RECADILSSFIAA 130 >gi|255003850|ref|ZP_05278651.1| riboflavin biosynthesis protein (ribD) [Anaplasma marginale str. Virginia] Length = 360 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 40/162 (24%), Positives = 60/162 (37%), Gaps = 28/162 (17%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAE 55 M FMS AL A P VG V I+ R HAE Sbjct: 1 MFDDERFMSIALRLAHRGL--GNTYPNPTVGCVVTNSAGSIVGRGW--TAMGGRP--HAE 54 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGG 109 ++A++ +YVTLEPC C AA+ A +RR+ A +P Sbjct: 55 VVALKQAGEAA-----AGSTVYVTLEPCCHHGQTGPCTAALISAGVRRVVIAALDPDKRV 109 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF--KERR 149 G + + E+ G+ +Q++ ++ FF K +R Sbjct: 110 SGKGARSLADSG----VEVKLGVLQQQAEELNVGFFYSKTKR 147 >gi|257388119|ref|YP_003177892.1| CMP/dCMP deaminase zinc-binding [Halomicrobium mukohataei DSM 12286] gi|257170426|gb|ACV48185.1| CMP/dCMP deaminase zinc-binding [Halomicrobium mukohataei DSM 12286] Length = 154 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 55/143 (38%), Gaps = 1/143 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + A++ A+ AA R + P G+V V +++ I+ A NR D+ H E+ Sbjct: 10 DHERHVQSAIDLARAAADRGDRPFGSVLVRDDEQIAAASNRVVTEDDLRRHPELDLALAA 69 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA-SNPKGGGIENGTQFYTLAT 121 R + E +Y + EPC MCA + + R+ Y + + A Sbjct: 70 ERSYTPEERARTVMYTSTEPCPMCAGGLRSVGLGRIVYSVGGDEIHEFTGGEPTVRSGAI 129 Query: 122 CHHSPEIYPGISEQRSRQIIQDF 144 ++ + + + + F Sbjct: 130 LDGVTDVTGPVCHEAGLAVHEAF 152 >gi|170693630|ref|ZP_02884788.1| riboflavin biosynthesis protein RibD [Burkholderia graminis C4D1M] gi|170141412|gb|EDT09582.1| riboflavin biosynthesis protein RibD [Burkholderia graminis C4D1M] Length = 385 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 54/151 (35%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + V M AL A+ + P VG V V N ++I + HAEI A+ Sbjct: 4 QTDFVHMERALALARRGMYTTDPNPRVGCVIVKNGEVIGEGFTQPAGQD----HAEIRAM 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + L YVTLEPC CA A+ A++ R+ +P G Sbjct: 60 KDA--RSRGHDLRGATAYVTLEPCSHFGRTPPCANALIEAQVARVVAAMEDPNPQVSGRG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ + ++ F Sbjct: 118 LAILRDAG----IEVRCGLLANEAHELNIGF 144 >gi|254474243|ref|ZP_05087633.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Pseudovibrio sp. JE062] gi|211956617|gb|EEA91827.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Pseudovibrio sp. JE062] Length = 171 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 48/128 (37%), Gaps = 8/128 (6%) Query: 24 IPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 P G A+ + ++++A NR D ++H E+ AIR C+ P LY T EP Sbjct: 32 TPFGGALYGSDGTLLAQAYNRMVRECDPSSHGELNAIREACKKYQTRSFPGSILYATSEP 91 Query: 83 CTMCAAAISLARIRRLYYGA-SNPKGGGI------ENGTQFYTLATCHHSPEIYPGISEQ 135 C MC A + L +GA +N EI G+ Sbjct: 92 CPMCMTATISIGVETLVFGAFTNEDAINFWPQEMDLRARDIAEHVIMRPKIEIIEGVERD 151 Query: 136 RSRQIIQD 143 RQ+ D Sbjct: 152 ACRQLFTD 159 >gi|77165491|ref|YP_344016.1| riboflavin biosynthesis protein RibD [Nitrosococcus oceani ATCC 19707] gi|254433444|ref|ZP_05046952.1| riboflavin biosynthesis protein RibD [Nitrosococcus oceani AFC27] gi|76883805|gb|ABA58486.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Nitrosococcus oceani ATCC 19707] gi|207089777|gb|EDZ67048.1| riboflavin biosynthesis protein RibD [Nitrosococcus oceani AFC27] Length = 365 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 21/149 (14%) Query: 8 MSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+ AQ + P VG V V +I+ ++ +HAEI A+R Sbjct: 1 MARALKLAQRGLFTTDPNPRVGCVLVRGGEIVGEGWHQQAGD----SHAEINALRQAG-- 54 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC C A+ A + R+ +P G Sbjct: 55 ---IRAQGSTCYVTLEPCCHRGRTPPCTEALIEAGVVRVVAAMGDPHPKVASQGLAQLRE 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148 A ++ G+ ++ ++ + F + Sbjct: 112 AGL----QVEHGLLQEEAQALNVGFVQRL 136 >gi|303245768|ref|ZP_07332051.1| riboflavin biosynthesis protein RibD [Desulfovibrio fructosovorans JJ] gi|302493031|gb|EFL52896.1| riboflavin biosynthesis protein RibD [Desulfovibrio fructosovorans JJ] Length = 380 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 58/151 (38%), Gaps = 23/151 (15%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 FM+ ALE A+ R + P VGAV V + I++ ++ HAE+ + Sbjct: 5 DADFMARALELAERG--RGFVMPNPRVGAVLVRDGGIVAEGWHKVFGG----PHAEVECL 58 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R +YVTLEPC C+ + A I R+ G +P G Sbjct: 59 HDAERKGVSP--AGGTMYVTLEPCNHFGKTPPCSRTLLDAGIARVVVGCLDPNP-VAGGG 115 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 E+ G+ E + R+ + DF Sbjct: 116 AALLRQEG----VEVTVGVLESQCREAVADF 142 >gi|319941823|ref|ZP_08016145.1| AMP deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Sutterella wadsworthensis 3_1_45B] gi|319804756|gb|EFW01623.1| AMP deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Sutterella wadsworthensis 3_1_45B] Length = 415 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 20/150 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M AL +A+ A P VGAV V N +++ + HAE++A+R Sbjct: 55 DDAWMDLALAQARKAWRI-SPPNPSVGAVIVRNGRLVGAGHTQRTGG----PHAEVMALR 109 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +YVTLEPC CA A+ +++ R+ +P G Sbjct: 110 SAFERGLS--VEGATVYVTLEPCSHYGRTPPCALALIQSKVGRVVAAVGDPNPKVHGRGI 167 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A G+ E +R++ F Sbjct: 168 RMLLEAGIP----AELGVREAEAREVNIAF 193 >gi|229145969|ref|ZP_04274348.1| Riboflavin biosynthesis protein [Bacillus cereus BDRD-ST24] gi|228637577|gb|EEK94028.1| Riboflavin biosynthesis protein [Bacillus cereus BDRD-ST24] Length = 348 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +N+I+ + HAEI AIRM E +YVTLEPC+ Sbjct: 11 VGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMAG-----EQARGATIYVTLEPCSH 61 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA AI A I+++ +P G + A E+ G+ E+ S++ Sbjct: 62 HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAG----IEVLVGVCEEESKK 117 Query: 140 IIQDF 144 + + F Sbjct: 118 MNEVF 122 >gi|226939661|ref|YP_002794734.1| RibD [Laribacter hongkongensis HLHK9] gi|226714587|gb|ACO73725.1| RibD [Laribacter hongkongensis HLHK9] Length = 383 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 53/150 (35%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ A+ VG V V + ++ + T HAE A+ Sbjct: 5 DDHRYMARALQLARLGMTSTAPNPRVGCVVVSDGQVAGEGWHVRA----GTPHAERHALA 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M E YVTLEPC CA A+ A + R+ +P G Sbjct: 61 MAG-----ERARGATAYVTLEPCSHFGRTPPCADALLQAGVGRVVAAMVDPNPLVAGQGM 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E G+ E + ++ + F Sbjct: 116 TRLAAAG----IECASGLLEAEACELNRGF 141 >gi|330507217|ref|YP_004383645.1| hypothetical protein MCON_1091 [Methanosaeta concilii GP-6] gi|328928025|gb|AEB67827.1| conserved domain protein [Methanosaeta concilii GP-6] Length = 281 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 37/140 (26%), Positives = 54/140 (38%), Gaps = 24/140 (17%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV----LNNKIISR--AGNRNRELKDVTAHAEI 56 +G+ +M A A+ + P A+ + ++I+ N+ D TAHAEI Sbjct: 100 EGDRWMQLACLAARESVEEKGGPFAALILQIDNCTDQILRYWINHNQVTSALDPTAHAEI 159 Query: 57 LAIRMGCRILSQEIL----------------PEVDLYVTLEPCTMCAAAISLARIRRLYY 100 +AIR C L L +Y + EPC MC AAI A I L + Sbjct: 160 MAIRSACASLGVFDLGSIRKDESKLAQPGDLSHCVIYSSAEPCPMCYAAICWANIPMLLF 219 Query: 101 GASNPKGGGIENGTQFYTLA 120 A+ + G F A Sbjct: 220 AAT--RFDAATQGVDFSDEA 237 >gi|261493709|ref|ZP_05990228.1| riboflavin biosynthesis protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494376|ref|ZP_05990870.1| riboflavin biosynthesis protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310025|gb|EEY11234.1| riboflavin biosynthesis protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310709|gb|EEY11893.1| riboflavin biosynthesis protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 403 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 57/153 (37%), Gaps = 25/153 (16%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +M+ A+ A+ A R P VG V V N II+ ++ K + HAE A Sbjct: 40 TDVQYMAYAITLAEKA--RGWTSPNPLVGCVIVKNGNIIAEGYHQ----KAGSWHAERNA 93 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + +E L YVTLEPC C+ + I++++ G+ +P Sbjct: 94 I-----LNCEEDLTGATAYVTLEPCCHHGRTPPCSELLIERGIKKVFIGSRDPNPLVSGK 148 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G A E+ + FF Sbjct: 149 GAAQLRAAG----IEVVEDFMRTECDALNPIFF 177 >gi|332519663|ref|ZP_08396127.1| riboflavin biosynthesis protein RibD [Lacinutrix algicola 5H-3-7-4] gi|332044222|gb|EGI80416.1| riboflavin biosynthesis protein RibD [Lacinutrix algicola 5H-3-7-4] Length = 321 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 40/146 (27%), Positives = 59/146 (40%), Gaps = 19/146 (13%) Query: 8 MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A++ A N R VGAV V NN II HAE+ AI + Sbjct: 1 MQRAIQIANNGLGTTRPNPMVGAVIVHNNIIIGEGFTSAYGGN----HAEVNAINA---V 53 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 ++++L + LYVTLEPC C+ I I + G + G + Sbjct: 54 KNKDLLKKSTLYVTLEPCSHYGKTPPCSDLIIHHNIPNVVIGCVDDNPEVAGKGIKKLMG 113 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145 A C ++ GI E + ++ + FF Sbjct: 114 ANC----KVTLGILENKCKEHHKRFF 135 >gi|332967791|gb|EGK06895.1| riboflavin biosynthesis protein RibD [Kingella kingae ATCC 23330] Length = 360 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M ALE A + P VG V ++II + + + HAE+ AIR Sbjct: 7 QDTQHMQRALELAWQGRFSTSPNPRVGCVIAHGSQIIGQGFH--VQAGSP--HAEVHAIR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA + A + R+ ++P G Sbjct: 63 QAGELA-----RGATAYVTLEPCSHYGRTPPCAEGLIAAGVSRVVAAMTDPNPLVAGKGL 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + G+ E +RQ+ + F Sbjct: 118 AMLQAAG----IMVEQGLLEHEARQLNRGF 143 >gi|149187995|ref|ZP_01866290.1| pyrimidine reductase [Vibrio shilonii AK1] gi|148837983|gb|EDL54925.1| pyrimidine reductase [Vibrio shilonii AK1] Length = 369 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 MS ALE A+ P VG V LNN+++ ++ HAE+ A+RM Sbjct: 8 DYQMMSRALELAKRGRFTTAPNPNVGCVITLNNEVVGEGYHKKAGE----PHAEVHALRM 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA + A + ++ S+P G Sbjct: 64 AA-----ERAKGATAYVTLEPCSHYGRTPPCAEGLIKAGVSKVICAMSDPNPQVAGRGFN 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ EQ +R + F K+ Sbjct: 119 MLREAG----IEVSVGLLEQDARALNPGFLKK 146 >gi|257868250|ref|ZP_05647903.1| riboflavin-specific deaminase [Enterococcus casseliflavus EC30] gi|257874477|ref|ZP_05654130.1| riboflavin biosynthesis protein RibD [Enterococcus casseliflavus EC10] gi|257802364|gb|EEV31236.1| riboflavin-specific deaminase [Enterococcus casseliflavus EC30] gi|257808641|gb|EEV37463.1| riboflavin biosynthesis protein RibD [Enterococcus casseliflavus EC10] Length = 358 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 37/139 (26%), Positives = 54/139 (38%), Gaps = 19/139 (13%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N +M A+ EA+ + VGAV V ++I++ + HAE AI Sbjct: 2 HNEYMRLAIAEAKKGRYQTFTNPLVGAVIVKEQRVIAKGAHLVYGQ----PHAERNAIEQ 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 S E L LYVTLEPC C I + I+++ G +P G + Sbjct: 58 ---CHSSEDLINSTLYVTLEPCNHQGKQPPCTQLIIDSGIKKVVVGQLDPNPIVAGQGKR 114 Query: 116 FYTLATCHHSPEIYPGISE 134 F ++ GI E Sbjct: 115 FLEEQG----IDVLVGIEE 129 >gi|149372326|ref|ZP_01891514.1| riboflavin biosynthesis protein ribD [unidentified eubacterium SCB49] gi|149354716|gb|EDM43279.1| riboflavin biosynthesis protein ribD [unidentified eubacterium SCB49] Length = 340 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 21/147 (14%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M ++ A+ P VG+V V+++KII + HAE+ AI Sbjct: 1 MFRCIQLAKKGLGYT-YPNPLVGSVIVVDDKIIGEGWHLEAGK----PHAEVNAINS--- 52 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + +++L + +YV+LEPC CA I I+ + G+++P G Sbjct: 53 VTDEKLLEKATIYVSLEPCSHFGKTPPCADLIVTKGIKNIVIGSTDPNPKVAGKGIIKLM 112 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145 A C ++ G+ ++ + + FF Sbjct: 113 QAGC----KVKVGVLQKECDALNKRFF 135 >gi|254410513|ref|ZP_05024292.1| riboflavin biosynthesis protein RibD [Microcoleus chthonoplastes PCC 7420] gi|196182719|gb|EDX77704.1| riboflavin biosynthesis protein RibD [Microcoleus chthonoplastes PCC 7420] Length = 380 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 54/149 (36%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M +E A+ A R P VGAV V + ++ + HAEI A+R Sbjct: 26 DRTMMQRCIELARRALGRTSPNPLVGAVIVRDGAMVGEGFH----PGAGQPHAEIFALRQ 81 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +YV LEPC C A+ A + ++ G +P G + Sbjct: 82 AGDKSQ-----GATIYVNLEPCNHYGRTPPCTEALIAAGVAKVVVGMVDPNPLVAGGGIE 136 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ + RQ+ + F Sbjct: 137 RLKKAG----IEVVVGVETEACRQLNEAF 161 >gi|56416383|ref|YP_153457.1| riboflavin biosynthesis protein [Anaplasma marginale str. St. Maries] gi|222474753|ref|YP_002563168.1| riboflavin biosynthesis protein (ribD) [Anaplasma marginale str. Florida] gi|254994610|ref|ZP_05276800.1| riboflavin biosynthesis protein (ribD) [Anaplasma marginale str. Mississippi] gi|56387615|gb|AAV86202.1| riboflavin biosynthesis protein [Anaplasma marginale str. St. Maries] gi|222418889|gb|ACM48912.1| riboflavin biosynthesis protein (ribD) [Anaplasma marginale str. Florida] Length = 371 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 40/162 (24%), Positives = 60/162 (37%), Gaps = 28/162 (17%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAE 55 M FMS AL A P VG V I+ R HAE Sbjct: 1 MFDDERFMSIALRLAHRGL--GNTYPNPTVGCVVTNSAGSIVGRGW--TAMGGRP--HAE 54 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGG 109 ++A++ +YVTLEPC C AA+ A +RR+ A +P Sbjct: 55 VVALKQAGEAA-----AGSTVYVTLEPCCHHGQTGPCTAALISAGVRRVVIAALDPDKRV 109 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF--KERR 149 G + + E+ G+ +Q++ ++ FF K +R Sbjct: 110 SGKGARSLADSG----VEVKLGVLQQQAEELNVGFFYSKTKR 147 >gi|332851042|ref|XP_003316032.1| PREDICTED: tRNA-specific adenosine deaminase-like protein 3 [Pan troglodytes] Length = 367 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 42/155 (27%) Query: 26 VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI--LSQEILP--------- 72 VGAV V +++++ + + + HA ++ + + R L Sbjct: 211 VGAVVVDPASDRVLATGHDCSCAD-NPLLHAVMVCVDLVARGQGRGTYDLRPFPACSFAP 269 Query: 73 ---------------------------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 DLYVT EPC MCA A+ ARI R++YGA +P Sbjct: 270 AAAPQAVRAGAVRKLDADEDGLPYLCTGYDLYVTREPCAMCAMALVHARILRVFYGAPSP 329 Query: 106 KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 G + + + +H +++ G+ E++ R + Sbjct: 330 D-GALGTRFRIHARPDLNHRFQVFRGVLEEQCRWL 363 >gi|314924237|gb|EFS88068.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL001PA1] gi|314964911|gb|EFT09010.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL082PA2] gi|315103908|gb|EFT75884.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL050PA2] gi|327325608|gb|EGE67407.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL103PA1] Length = 331 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 21/144 (14%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+ A + + P VG V V +++I + +R T HAE+ A+R Sbjct: 9 MVLALDMAAKSPCPDPNPRVGCVIVAEDRVIGQGWHR----GAGTPHAEVEALRQAG--- 61 Query: 67 SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + VTLEPC C+ A+ A I R+ S+P T Sbjct: 62 --DDAKGATAVVTLEPCHHTGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRT-- 117 Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144 H E+ G+ + + + D+ Sbjct: 118 ---HGVEVVTGVLSEEATALNADW 138 >gi|315093789|gb|EFT65765.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL060PA1] Length = 331 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 21/144 (14%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+ A + + P VG V V +++I + +R T HAE+ A+R Sbjct: 9 MVLALDMAAKSPCPDPNPRVGCVIVAEDRVIGQGWHR----GAGTPHAEVEALRQAG--- 61 Query: 67 SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + VTLEPC C+ A+ A I R+ S+P T Sbjct: 62 --DDAKGATAVVTLEPCHHTGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRT-- 117 Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144 H E+ G+ + + + D+ Sbjct: 118 ---HGVEVVTGVLSEEATALNADW 138 >gi|186475387|ref|YP_001856857.1| riboflavin biosynthesis protein RibD [Burkholderia phymatum STM815] gi|184191846|gb|ACC69811.1| riboflavin biosynthesis protein RibD [Burkholderia phymatum STM815] Length = 373 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 56/151 (37%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + V M AL A + P VG V V N ++I + HAEI A+ Sbjct: 4 QTDFVHMERALALAWRGLYTTDPNPRVGCVLVKNGEVIGEGFTQPAGRD----HAEIQAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + + L YVTLEPC CA A+ A++ R+ +P G Sbjct: 60 KDARKRGH--DLQGATAYVTLEPCSHFGRTPPCANALIEAKLARVVAAMEDPNPRVSGRG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E +R++ F Sbjct: 118 LSMLREAG----IEVRCGLLENDARELNIGF 144 >gi|94986602|ref|YP_594535.1| pyrimidine reductase, riboflavin biosynthesis [Lawsonia intracellularis PHE/MN1-00] gi|94730851|emb|CAJ54213.1| Pyrimidine reductase, riboflavin biosynthesis [Lawsonia intracellularis PHE/MN1-00] Length = 382 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 51/145 (35%), Gaps = 19/145 (13%) Query: 8 MSCALEEAQNA-ALRNEIPV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ A+ PV G+V + N KI++ + HAE+L I Sbjct: 13 MKYAISIAEKGRWDTAPNPVVGSVLIQNGKIVAEGFHSLYGG----PHAEVLCINDAKNK 68 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L + L TLEPC C AI I+ + G +P + Sbjct: 69 HIN--LSDCTLITTLEPCNHYGKTPPCTKAIIDNNIKHVIIGTKDPTTLASGGVHTLTSA 126 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 + GI E+ + +I DF Sbjct: 127 -----GITVEVGILEKECQALIADF 146 >gi|269958267|ref|YP_003328054.1| riboflavin biosynthesis protein [Anaplasma centrale str. Israel] gi|269848096|gb|ACZ48740.1| riboflavin biosynthesis protein [Anaplasma centrale str. Israel] Length = 365 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 40/156 (25%), Positives = 58/156 (37%), Gaps = 26/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLN-NKIISRAGNRNRELKDVTAHAE 55 M FMS AL A+ P VG V I+ R HAE Sbjct: 1 MFNDERFMSIALRLARRGL--GNTYPNPTVGCVITNGAGSIVGRGW--TAMGGRP--HAE 54 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGG 109 ++A+R YVTLEPC C AA+ A +RR+ A +P Sbjct: 55 VVALRHAGEAA-----AGSTAYVTLEPCCHRGQTGPCTAALINAGVRRVVIAALDPDERV 109 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + + A E+ G+ +Q++ ++ FF Sbjct: 110 SGKGAKSLSEAG----VEVKLGVLQQQAEELNAGFF 141 >gi|168025673|ref|XP_001765358.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683411|gb|EDQ69821.1| predicted protein [Physcomitrella patens subsp. patens] Length = 393 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 21/151 (13%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M ++ A+ A + P VG V V + +I+ R + HAE+ A+ Sbjct: 26 EVDAFYMRMCVDLARQAVGKTSPNPIVGCVIVKDGRIVGRGFHPKAGE----PHAEVFAL 81 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + YV+LEPC C+ A+ A+++R+ G +P G Sbjct: 82 REAGPLAQ-----GATAYVSLEPCNHYGRTPPCSQALVKAKLKRVVVGVVDPNPQVGGKG 136 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + + E+ G+ E + + F Sbjct: 137 IKTLR----NAGIEVVVGVEETLCLKANESF 163 >gi|332307440|ref|YP_004435291.1| riboflavin biosynthesis protein RibD [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174769|gb|AEE24023.1| riboflavin biosynthesis protein RibD [Glaciecola agarilytica 4H-3-7+YE-5] Length = 372 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 57/153 (37%), Gaps = 22/153 (14%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 M+ A+ A+ + P VG V I+ + ++ K T HAEI AI Sbjct: 8 DAKMMALAIRLAEKGQYTTSPNPNVGCVLTDPKGNIVGQGWHQ----KAGTPHAEIHAIA 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 E YVTLEPC C+ A+ A + R+ +P +G Sbjct: 64 QAG-----ERTKGATAYVTLEPCNHHGRTGPCSEALIKAGVSRVVAAMVDPNPLVAGSGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 Q + A + G+ E+ ++ + F K Sbjct: 119 QKLSDAG----VAVSSGLLEREAKALNLGFIKR 147 >gi|83319309|ref|YP_424006.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283195|gb|ABC01127.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 147 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 4/150 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 M N + + E++ A N+IPV + NN I+S A N + KD++ HAEI I Sbjct: 1 MDDFNNILDLLINESKKAIKHNDIPVSCCIIDSNNNILSLAINSRYKNKDISQHAEINVI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L+ L + L TLEPC MC +AI +I +YY + K G I+N Sbjct: 61 NDLISKLNSFNLSKYKLITTLEPCMMCYSAIKQVKINTIYYLVDSYKFG-IKNNYSI-ND 118 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +I + +++ FF +R Sbjct: 119 QNLN-LIQIKNQKKQSEYIKLLNIFFINKR 147 >gi|58583602|ref|YP_202618.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84625409|ref|YP_452781.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188575147|ref|YP_001912076.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae PXO99A] gi|58428196|gb|AAW77233.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84369349|dbj|BAE70507.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519599|gb|ACD57544.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 151 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 13/135 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A+ EA+ IP+GA + +++ NR + D + H E A R R Sbjct: 11 LDTAIIEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR-- 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 Q + + TL PC C+ + I + G S GGI + H Sbjct: 69 -QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESLTFQGGIAWLRE--------HGV 119 Query: 127 EIYPGISEQRSRQII 141 + + Q ++ Sbjct: 120 NVID-LQSQECIDLL 133 >gi|58584287|ref|YP_197860.1| pyrimidine deaminase and reductase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418603|gb|AAW70618.1| Pyrimidine deaminase and reductase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 378 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 25/155 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 N FMS AL A+ + P VG + V + ++ HAE+ A+ Sbjct: 3 DNHFMSIALSLAEK--TLGNVAPNPAVGCIIVKDGVVVGEGH----TGIGGRPHAEVAAL 56 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 + +YVTLEPC C I + I+++ A +P G Sbjct: 57 QSAKGSTH-----GATMYVTLEPCCHYGVTEPCIIEIIRSGIKKVVVAAIDPDKRVSGGG 111 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + A + GI ++ + ++ FF R Sbjct: 112 IKALEEAG----ITVEQGIMQEEAEKLNIGFFTTR 142 >gi|220934731|ref|YP_002513630.1| riboflavin biosynthesis protein RibD [Thioalkalivibrio sp. HL-EbGR7] gi|219996041|gb|ACL72643.1| riboflavin biosynthesis protein RibD [Thioalkalivibrio sp. HL-EbGR7] Length = 369 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 55/154 (35%), Gaps = 21/154 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M+ AL+ A+ + P VG V V + +++ + HAEILA+ Sbjct: 4 ETDTRHMARALQLARRGLYTTDPNPRVGCVMVRDGQVLGEGFHVRAGE----PHAEILAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R +YVTLEPC CA A+ A + R+ +P G Sbjct: 60 RQAGEAA-----RGATVYVTLEPCAHFGRTPPCADALIHAGVARVVAAMVDPNPRVAGQG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 T A G+ E +R + F Sbjct: 115 LARLTAAG----ITTASGVLEAEARALNPGFISR 144 >gi|242240315|ref|YP_002988496.1| riboflavin biosynthesis protein RibD [Dickeya dadantii Ech703] gi|242132372|gb|ACS86674.1| riboflavin biosynthesis protein RibD [Dickeya dadantii Ech703] Length = 370 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ ALE A+ + P VG V V + +++ ++ HAE+ A+R Sbjct: 5 SDEFYMARALELARRGIFTTSPNPNVGCVIVRDGEVVGEGFHQKAGE----PHAEVHALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC CA A+ A + R+ +P G Sbjct: 61 MAGDKAQ-----GATVYVTLEPCSHHGRTPPCADALIAAGVARVVAAMQDPNPQVAGRGL 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ + I + F K R Sbjct: 116 HRLHQAG----IEVCHGVMADAAENINRGFLKRMR 146 >gi|87161517|ref|YP_494408.1| riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195585|ref|YP_500391.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus NCTC 8325] gi|87127491|gb|ABD22005.1| riboflavin biosynthesis protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203143|gb|ABD30953.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp. aureus NCTC 8325] Length = 334 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 24/131 (18%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83 PVGAV V +I+ + + K HAE+ A+ M Q+ +Y+TLEPC Sbjct: 11 PVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA-----QQNAEGATIYITLEPCS 61 Query: 84 -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-HSPEIYPGISEQRS 137 C I +I ++ Y + N + T H E+ + ++R+ Sbjct: 62 HFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDTHGDETLRAHGIEVEC-VDDERA 113 Query: 138 RQIIQDFFKER 148 Q+ QDFFK + Sbjct: 114 SQLYQDFFKAK 124 >gi|220906868|ref|YP_002482179.1| CMP/dCMP deaminase [Cyanothece sp. PCC 7425] gi|219863479|gb|ACL43818.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7425] Length = 150 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 8/138 (5%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL---SQ 68 LE A++A + + V A+ + ++I++ N+ + D+TAHAE++ +R L S Sbjct: 6 LELARSAIAQGKAGVAALMLWRDEILAFDHNQAVDTGDLTAHAEMVVLRQASSRLSQMSD 65 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS--- 125 E+ LYVTLEPC MC +AIS A I+R+ Y A N G + T + + Sbjct: 66 AEKAEITLYVTLEPCLMCLSAISFAGIKRVVYSALNRDGKPEIWISDGITTEEINETLVR 125 Query: 126 --PEIYPGISEQRSRQII 141 E+ PG+ + + I+ Sbjct: 126 GPLELVPGVKREEGQAIL 143 >gi|182678211|ref|YP_001832357.1| riboflavin biosynthesis protein RibD [Beijerinckia indica subsp. indica ATCC 9039] gi|182634094|gb|ACB94868.1| riboflavin biosynthesis protein RibD [Beijerinckia indica subsp. indica ATCC 9039] Length = 401 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 54/146 (36%), Gaps = 21/146 (14%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M+ AL +Q R VGA+ V + KI+ R + HAE A+ Sbjct: 22 ETDTHYMAEALALSQQGLGRTAPNPSVGAIIVKDGKIVGRGWTQPGGR----PHAETEAL 77 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 LYVTLEPC CA+AI A + R+ +P G Sbjct: 78 AEAGDAA-----RGATLYVTLEPCSHFGVTPPCASAIIAAGVARVVCALEDPDPRVSGRG 132 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQ 139 + A + G+ E +R+ Sbjct: 133 YRMLREAG----IAVTHGVLEAEARR 154 >gi|322386627|ref|ZP_08060252.1| tRNA-specific adenosine deaminase [Streptococcus cristatus ATCC 51100] gi|321269300|gb|EFX52235.1| tRNA-specific adenosine deaminase [Streptococcus cristatus ATCC 51100] Length = 67 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 36/65 (55%) Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 MC+ AI LARI ++ YGA N K G + T +H E+ G+ E+ I+Q+F Sbjct: 1 MCSGAIGLARIPKVIYGAKNQKFGAGGSLYDILTDERLNHRVEVESGLLEEECAAIMQNF 60 Query: 145 FKERR 149 F+ RR Sbjct: 61 FRNRR 65 >gi|261856455|ref|YP_003263738.1| riboflavin biosynthesis protein RibD [Halothiobacillus neapolitanus c2] gi|261836924|gb|ACX96691.1| riboflavin biosynthesis protein RibD [Halothiobacillus neapolitanus c2] Length = 386 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL A+ + P VG V V +++ R + HAE+ A++ Sbjct: 13 DDTRWMREALALAERGLTTTQPNPRVGCVIVNAGEVVGRGFHALAGG----PHAEVFALQ 68 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E YVTLEPC CA ++ A +RR+ ++P G Sbjct: 69 EAG-----ERAKGATAYVTLEPCAHVGRTPACAPQLADAGVRRVVTAMTDPDPRVAGEGH 123 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ E +R + + F Sbjct: 124 AILRTAG----VQVESGLLEAEARWLNRGF 149 >gi|116326904|ref|YP_796624.1| cytosine/adenosine deaminase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332428|ref|YP_802146.1| cytosine/adenosine deaminase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116119648|gb|ABJ77691.1| Cytosine/adenosine deaminase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116126117|gb|ABJ77388.1| Cytosine/adenosine deaminase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 155 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 2/130 (1%) Query: 20 LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 R E+P ++IS N + D + H+EIL IR + L L + L + Sbjct: 24 EREEVPSFTRIYQKEELISETFNEVEKHLDSSFHSEILCIRDAKKKLKTRYLTDCTLITS 83 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 LEPC MC I L+RI ++ Y +G GI + + + + PE+ I + S+ Sbjct: 84 LEPCLMCTGTILLSRIPKIIYLLPARQGEGISS-LSIEMIYSRNFFPELIC-IPAEISKN 141 Query: 140 IIQDFFKERR 149 + FFK RR Sbjct: 142 AFKSFFKIRR 151 >gi|241662321|ref|YP_002980681.1| riboflavin biosynthesis protein RibD [Ralstonia pickettii 12D] gi|240864348|gb|ACS62009.1| riboflavin biosynthesis protein RibD [Ralstonia pickettii 12D] Length = 370 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 55/150 (36%), Gaps = 20/150 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M AL A+ P VG V V ++ +I + HAE+ AI+ Sbjct: 6 DHAMMQRALALAEKGLFTT-TPNPRVGCVIVRDDTVIGEGYTQPAGQD----HAEVQAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + + YVTLEPC CA + A I R+ +P G Sbjct: 61 DA--QSRGQDVRGATAYVTLEPCSHFGRTPPCADRLVEAGIARVVAAMEDPNPAVSGRGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 Q A ++ G+ E+ +R++ F Sbjct: 119 QKLRDAG----VDVRCGLLEREARELNIGF 144 >gi|187925073|ref|YP_001896715.1| riboflavin biosynthesis protein RibD [Burkholderia phytofirmans PsJN] gi|187716267|gb|ACD17491.1| riboflavin biosynthesis protein RibD [Burkholderia phytofirmans PsJN] Length = 383 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 54/151 (35%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + V M AL A+ + P VG V V N ++I + HAEI A+ Sbjct: 4 QTDFVHMERALALAKRGMYTTDPNPRVGCVLVKNGEVIGEGFTQPAGQD----HAEIRAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + L YVTLEPC CA A+ A++ R+ +P G Sbjct: 60 KDA--RSRGHDLRGATAYVTLEPCSHFGRTPPCANALIEAQVARVVAAMEDPNPQVSGRG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ + ++ F Sbjct: 118 LAMLRDAG----IEVRCGLLAHEAHELNIGF 144 >gi|320167576|gb|EFW44475.1| tRNA-specific adenosine deaminase-like protein 3 [Capsaspora owczarzaki ATCC 30864] Length = 418 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 33/151 (21%) Query: 22 NEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL-------- 71 P+GAV V N I++ G+ +RE AHA ++AI QE L Sbjct: 263 GNSPIGAVVVDPATNTILASVGDCSREHT--LAHAAMVAIARVADAQRQEYLAALQQGEN 320 Query: 72 ---------------------PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 DLY+T EPC MC+ A+ +R+ R+++G +P GG+ Sbjct: 321 GAPASAEAGNSRPVAELPYLCTSYDLYITREPCVMCSMALVHSRVGRVFFGTPHPDMGGL 380 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 + + +H + G++E+R + Sbjct: 381 AGARRIHAEPKLNHHFLAFRGVAERRCAALF 411 >gi|228916001|ref|ZP_04079574.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228843596|gb|EEM88672.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 350 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 19/125 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +N+I+ + HAEI AIRM E +YVTLEPC+ Sbjct: 11 VGSVIVNDNRIVGIGAHMKAGE----PHAEIHAIRMAG-----EQARGGTIYVTLEPCSH 61 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA AI A I+++ +P G Q A E+ G+ E+ S++ Sbjct: 62 HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIQILQDAG----IEVLVGVCEEESKK 117 Query: 140 IIQDF 144 + + F Sbjct: 118 MNEVF 122 >gi|163789730|ref|ZP_02184167.1| Riboflavin biosynthesis protein RIBD (pirimidine deaminase and pirimidine reductase) [Carnobacterium sp. AT7] gi|159874952|gb|EDP69019.1| Riboflavin biosynthesis protein RIBD (pirimidine deaminase and pirimidine reductase) [Carnobacterium sp. AT7] Length = 351 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 19/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VGA+ V ++I + ++ HAE+ AI +E + LYVTLEPC Sbjct: 15 VGAIIVKGGRVIGQGYHQKYGQ----PHAEVNAIASA-----KEDVTGATLYVTLEPCSH 65 Query: 84 ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C+ + I+R+ G +P G + E+ G+ E+ S++ Sbjct: 66 FGKTPPCSDLLIDKNIKRVVVGTLDPNPLVAGKGIERLRSNG----IEVVTGVLEEESQK 121 Query: 140 IIQDFFK 146 + + F K Sbjct: 122 LNEIFIK 128 >gi|46199007|ref|YP_004674.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Thermus thermophilus HB27] gi|46196631|gb|AAS81047.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Thermus thermophilus HB27] Length = 377 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 55/155 (35%), Gaps = 23/155 (14%) Query: 1 MKK-GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M+ F+ AL+ A+ A P VGAV V +I+ + HAE+ Sbjct: 1 MRDLDERFLRRALQLAERARGHTSPNPLVGAVLVREGRIVGEGFHPRAGE----PHAEVF 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+R + YVTLEPC C+ A+ A + R+ A Sbjct: 57 ALREAGELA-----RGATAYVTLEPCDHFGRTPPCSLALLQAGVSRVVVAAREENPVAKG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + ++ G+ E +R + FF Sbjct: 112 GLERLRVG-----GVQVEAGLLEAEARAQNEVFFA 141 >gi|304312168|ref|YP_003811766.1| Riboflavin biosynthesis bifunctional RIBD: diaminohydroxyphosphoribosylaminopyrimid ine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase oxidoreductase protein [gamma proteobacterium HdN1] gi|301797901|emb|CBL46123.1| Riboflavin biosynthesis bifunctional RIBD: diaminohydroxyphosphoribosylaminopyrimid ine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase oxidoreductase protein [gamma proteobacterium HdN1] Length = 389 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 55/154 (35%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS AL+ A VG V V N I+ ++ HAE+LA+ Sbjct: 10 DHQMMSRALQLAPRGLYTTHPNPRVGCVIVQNGAIVGEGWHQLAGQG----HAEVLALEQ 65 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A I R+ S+P G Sbjct: 66 AG-----ERAKGATAYVTLEPCAHYGRTPPCANALIKAGIARVVGAMSDPNPRVSGGGYG 120 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ +Q++ + F K R Sbjct: 121 LLRAAG----IKTDNGLLKQQAEALNPGFIKRMR 150 >gi|114777001|ref|ZP_01452021.1| RibD [Mariprofundus ferrooxydans PV-1] gi|114552522|gb|EAU54982.1| RibD [Mariprofundus ferrooxydans PV-1] Length = 379 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 59/157 (37%), Gaps = 24/157 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + M A+E AQ P VGAV V +++ ++ HAE +A Sbjct: 23 TQHEALMLQAIELAQRGGGTT-HPNPRVGAVVVNRGEVVGVGWHKRAGG----PHAEAVA 77 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +++ + LYVTLEPC C AI A I+ + Y + +P Sbjct: 78 LQVAGK-----RARGGTLYVTLEPCSAHGRTPACTEAIRRAGIKHVVYASPDPNPQMSG- 131 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + A + G+ +++ + FF R Sbjct: 132 GHKILEAAG----ISVTAGVLREQAEALNIPFFHYLR 164 >gi|298715154|emb|CBJ27842.1| conserved unknown protein [Ectocarpus siliculosus] Length = 364 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 74/206 (35%), Gaps = 69/206 (33%) Query: 7 FMSCALEEAQNAALR-NEIP-VGAVAVLN--------NKIISRAGNRNRELKD------- 49 FM AL +A+ + P VGAV V ++++ A ++++D Sbjct: 149 FMRDALVDAETGRQQNGGRPTVGAVLVDPLGGCGGRRGRVVATASRERQKVRDEEPASMR 208 Query: 50 --VTAHAEILAI----------------------RMGCRILSQEI--------------- 70 HA +L + L +E Sbjct: 209 DHPLHHAVMLCVQGVGRALAAGSRQEKVARKQEEDSAGGKLGKEREGKGSESLCSDADPP 268 Query: 71 -------------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 DLYVT EPC MCA A+ +R+RR+ YG + + G + + T + Sbjct: 269 GGVVEVLSPEQYLCTGFDLYVTREPCLMCAMALVHSRVRRVIYGVRDTERGCLGSVTMLH 328 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQD 143 TL + +H+ ++ G+ RQ + D Sbjct: 329 TLTSLNHNYRVFEGVCADECRQSLSD 354 >gi|89073130|ref|ZP_01159669.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium sp. SKA34] gi|89051083|gb|EAR56540.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium sp. SKA34] Length = 374 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M A++ A+ P VG V + ++I+ + HAE+ A++ Sbjct: 6 DTRLMLRAIQLAKRGCFTTAPNPNVGCVIAIGDEILGEGFHYRAGE----PHAEVFALKQ 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ + I R+ +P G + Sbjct: 62 AG-----TRAKGATAYVTLEPCSHYGRTPPCAEALIKSGISRVICAMVDPNPLVAGRGVE 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A ++ G+ ++ ++ I + F K+ Sbjct: 117 MLQKAG----VDVQVGLLKEEAQAINKAFIKQ 144 >gi|323337097|gb|EGA78353.1| Tad2p [Saccharomyces cerevisiae Vin13] Length = 213 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 11/119 (9%) Query: 38 SRAGNRNRELKDVTAHAEILAIRMGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLA 93 + N + AHAE + I +L ++ ++ LYVT+EPC MCA+A+ Sbjct: 2 AYGMNDTNKSLTGVAHAEFMGIDQIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQL 61 Query: 94 RIRRLYYGASNPKGGGIENGTQFYTL-----ATCHHS--PEIYPGISEQRSRQIIQDFF 145 I ++ +G N + GG + + E PGI + + +++ F+ Sbjct: 62 GIGKVVFGCGNERFGGNGTVLSVNHDTCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 120 >gi|33240788|ref|NP_875730.1| pyrimidine reductase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238317|gb|AAQ00383.1| Pyrimidine reductase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 367 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 23/154 (14%) Query: 5 NVFMSCALEEAQNAALRNEI-P-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A+ A A + P VGAV + N+++ + HAEI AI Sbjct: 11 EPWMFRAINLASLAEGQTSPNPLVGAVILDEKNRLVGEGFHLRSGE----PHAEIGAIEQ 66 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + L V LEPC C AI + I+R+ +P G Sbjct: 67 AGSLA-----KGGTLLVNLEPCCHRGKTPPCTDAILRSGIKRVVVAIQDPDQRVSGKGIA 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF-FKER 148 F + E+ GI E+ + + + F F+ R Sbjct: 122 FLKESG----IEVVTGILEKEAAFLNRAFIFRNR 151 >gi|114331089|ref|YP_747311.1| riboflavin biosynthesis protein RibD [Nitrosomonas eutropha C91] gi|114308103|gb|ABI59346.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Nitrosomonas eutropha C91] Length = 367 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + MS AL+ A+ VG V V + K++ + +HAEI A+R Sbjct: 9 SDYMHMSHALQLAERGLFTTSPNPRVGCVIVNDGKVVGTGWHERVGE----SHAEINALR 64 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +YVTLEPC C A+ A + R+ +P G Sbjct: 65 EAGDLA-----RGATVYVTLEPCSHHGRTPPCVEALICAEVCRVIMAMDDPNPHVNGQGK 119 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ E ++Q+ F Sbjct: 120 EKLQKAG----VEVQTGLLEDEAQQLNIGF 145 >gi|19923945|ref|NP_612431.1| tRNA-specific adenosine deaminase-like protein 3 [Homo sapiens] gi|74731634|sp|Q96EY9|ADAT3_HUMAN RecName: Full=tRNA-specific adenosine deaminase-like protein 3; AltName: Full=tRNA-specific adenosine-34 deaminase subunit ADAT3 gi|15080093|gb|AAH11824.1| Adenosine deaminase, tRNA-specific 3, TAD3 homolog (S. cerevisiae) [Homo sapiens] Length = 351 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 42/155 (27%) Query: 26 VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ--------------- 68 VGAV V +++++ + + + HA ++ + + R + Sbjct: 195 VGAVVVDPASDRVLATGHDCSCAD-NPLLHAVMVCVDLVARGQGRGTYDFRPFPACSFAP 253 Query: 69 -----------------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 + DLYVT EPC MCA A+ ARI R++YGA +P Sbjct: 254 AAAPQAVRAGAVRKLDADEDGLPYLCTGYDLYVTREPCAMCAMALVHARILRVFYGAPSP 313 Query: 106 KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 G + + + +H +++ G+ E++ R + Sbjct: 314 D-GALGTRFRIHARPDLNHRFQVFRGVLEEQCRWL 347 >gi|188589601|ref|YP_001920640.1| riboflavin biosynthesis protein RibD [Clostridium botulinum E3 str. Alaska E43] gi|188499882|gb|ACD53018.1| riboflavin biosynthesis protein RibD [Clostridium botulinum E3 str. Alaska E43] Length = 366 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 25/153 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M ALE A+ ++ P VGA+ V +N+II + AHAE+ AI Sbjct: 5 NEKYMELALELAKKG--EGKVNPNPLVGALIVKDNEIIGSGYHEKYGE----AHAEVNAI 58 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + L +YVTLEPC C I +I+++ G +P Sbjct: 59 NNA-----TKSLDGSTIYVTLEPCSHYGKTPPCVDLIIEKKIKKVIIGMLDPNPMVSGRS 113 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + E+ G+ E++ ++I + F K Sbjct: 114 IKKLKDND----IEVIVGVEEEKCKKINESFIK 142 >gi|119589840|gb|EAW69434.1| hCG22695, isoform CRA_a [Homo sapiens] gi|119589842|gb|EAW69436.1| hCG22695, isoform CRA_a [Homo sapiens] gi|119589844|gb|EAW69438.1| hCG22695, isoform CRA_a [Homo sapiens] Length = 367 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 42/155 (27%) Query: 26 VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ--------------- 68 VGAV V +++++ + + + HA ++ + + R + Sbjct: 211 VGAVVVDPASDRVLATGHDCSCAD-NPLLHAVMVCVDLVARGQGRGTYDFRPFPACSFAP 269 Query: 69 -----------------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 + DLYVT EPC MCA A+ ARI R++YGA +P Sbjct: 270 AAAPQAVRAGAVRKLDADEDGLPYLCTGYDLYVTREPCAMCAMALVHARILRVFYGAPSP 329 Query: 106 KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 G + + + +H +++ G+ E++ R + Sbjct: 330 D-GALGTRFRIHARPDLNHRFQVFRGVLEEQCRWL 363 >gi|167565784|ref|ZP_02358700.1| riboflavin biosynthesis protein RibD [Burkholderia oklahomensis EO147] Length = 357 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 54/148 (36%), Gaps = 21/148 (14%) Query: 8 MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL A+ R VG V + +++ +R HAE+ A+R Sbjct: 1 MAHALRLAEQGLYTTRPNPRVGCVIAHDEQVLGTGWHRRAGE----PHAEVHALREAG-- 54 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E YVTLEPC CA A+ A + R+ A +P G Sbjct: 55 ---ERARGATAYVTLEPCAHYGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAARLAD 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E +R++ FF Sbjct: 112 AG----IVVEQGLMEAEARELNIGFFSR 135 >gi|257413677|ref|ZP_04743810.2| riboflavin biosynthesis protein RibD [Roseburia intestinalis L1-82] gi|257202725|gb|EEV01010.1| riboflavin biosynthesis protein RibD [Roseburia intestinalis L1-82] Length = 173 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 57/153 (37%), Gaps = 19/153 (12%) Query: 1 MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M++ +M A+E A+ + VGAV V ++II ++ HAE A Sbjct: 31 MQQ-ERYMRRAMELAELGRGWTKTNPVVGAVLVKEDRIIGEGYHKKFGGL----HAEREA 85 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + E DLYVTLEPC C A+ A I ++ GA + Sbjct: 86 L--ADCRSRGEDPAGADLYVTLEPCCHYGKTPPCTQAVIEAGISHVFVGAEDINPLVAGA 143 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + + G+ ++ + FF Sbjct: 144 GIRQLREQGIL----VTEGVLQEECEYQNRVFF 172 >gi|22299695|ref|NP_682942.1| riboflavin biosynthesis protein [Thermosynechococcus elongatus BP-1] gi|22295879|dbj|BAC09704.1| riboflavin biosynthesis protein [Thermosynechococcus elongatus BP-1] Length = 379 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 57/150 (38%), Gaps = 19/150 (12%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M LE A A R P VG V V ++I + HAE+ A+R Sbjct: 14 DAQYMGRCLELAARAKGRT-APNPLVGCVIVAEGRVIGEGFHPKAGE----PHAEVFALR 68 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +L + LYV LEPC C AI A I ++ G +P G Sbjct: 69 SVSES-DRPLLSKATLYVNLEPCNHYGRTPPCTEAILAAGIPKVVVGMIDPNPQVAGAGV 127 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ E +++ + F Sbjct: 128 ERLRSAG----IEVTVGVREADCQRLNEAF 153 >gi|299771887|ref|YP_003733913.1| pyrimidine deaminase [Acinetobacter sp. DR1] gi|298701975|gb|ADI92540.1| pyrimidine deaminase [Acinetobacter sp. DR1] Length = 361 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +K+ +M A+E A+ P VG V V ++++I + K HAE+ A Sbjct: 4 LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFH----PKAGQPHAEVFA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R YVTLEPC CA A+ A+++++ +P Sbjct: 60 LRQAAEQAQ-----GATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGK 114 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G Q + E+ GI E + ++ Q F K Sbjct: 115 GVQILK----NAGIEVEVGICENLAEKLNQGFLKA 145 >gi|307730708|ref|YP_003907932.1| riboflavin biosynthesis protein RibD [Burkholderia sp. CCGE1003] gi|307585243|gb|ADN58641.1| riboflavin biosynthesis protein RibD [Burkholderia sp. CCGE1003] Length = 384 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 55/151 (36%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + V M AL A+ + P VG V V N ++I + HAEI A+ Sbjct: 4 QTDFVHMERALALARRGMYTTDPNPRVGCVIVQNGEVIGEGFTQPAGQD----HAEIRAM 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + L YVTLEPC CA+A+ A++ R+ +P G Sbjct: 60 KDA--RSRGHDLRGATAYVTLEPCSHFGRTPPCASALIEAQVGRVVAAMEDPNPQVSGRG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ + ++ F Sbjct: 118 LAMLRDAG----IEVRCGLLANEAHELNIGF 144 >gi|16272881|ref|NP_439104.1| riboflavin biosynthesis protein [Haemophilus influenzae Rd KW20] gi|260580033|ref|ZP_05847863.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae RdAW] gi|1172932|sp|P44326|RIBD_HAEIN RecName: Full=Riboflavin biosynthesis protein RibD; Includes: RecName: Full=Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase; Includes: RecName: Full=5-amino-6-(5-phosphoribosylamino)uracil reductase; AltName: Full=HTP reductase gi|1573964|gb|AAC22598.1| riboflavin biosynthesis protein (ribD) [Haemophilus influenzae Rd KW20] gi|260093317|gb|EEW77250.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae RdAW] Length = 372 Score = 99 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 56/156 (35%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + VFM AL+ A P VG V V N +I+ + + HAE +A+ Sbjct: 6 SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 E YVTLEPC CA + A + ++ +P G Sbjct: 62 AQAG-----ENAKGATAYVTLEPCAHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + A E + ++ +I + F K R Sbjct: 117 LKMLSDAG----IESTVNLLNDQAEKINKGFLKRMR 148 >gi|295112158|emb|CBL28908.1| riboflavin biosynthesis protein RibD [Synergistetes bacterium SGP1] Length = 371 Score = 99 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 18/151 (11%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL A R VG V V + +I+ +R HAE+ A++ Sbjct: 11 DEYYMRRALSLALRGMGRTSPNPMVGCVLVRDGRILGEGWHRRCGED----HAEVAALKD 66 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 R ++YVTLEPC CA + + R+ G ++P G Sbjct: 67 AERRGETAR--GAEVYVTLEPCCHFGRTPPCAQRLVREGVSRVVAGTADPNPRVNSGGLA 124 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ E+ +R++ + F + Sbjct: 125 VLREAG----VEVSAPCLEEEARRVNKGFIR 151 >gi|300087628|ref|YP_003758150.1| riboflavin biosynthesis protein RibD [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527361|gb|ADJ25829.1| riboflavin biosynthesis protein RibD [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 362 Score = 99 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 25/149 (16%) Query: 8 MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M AL+ A E+ P VGAV V +++I+ + + + HAE++A+ Sbjct: 1 MQQALKLA--GLALGEVSPNPAVGAVVVKDDEIVGQGYTQPPGQE----HAEVMALNQAG 54 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 +YVTLEPC C AI A I+ +++ + G Sbjct: 55 ARSQ-----GAVMYVTLEPCAHQGRTPPCTDAIIAAGIKEVHFATLDDNPVVFGKGKAAL 109 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 T A E++ G +R++ + +FK Sbjct: 110 TAAG----IEVHVGEHRDAARELNEAYFK 134 >gi|257462874|ref|ZP_05627280.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Fusobacterium sp. D12] gi|317060498|ref|ZP_07924983.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium sp. D12] gi|313686174|gb|EFS23009.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium sp. D12] Length = 359 Score = 99 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 26/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M+ +M AL+ A+ ++ P VGAV V N II + + HAE+ Sbjct: 1 MEAQE-YMHFALKLAKKG--EGKVNPNPLVGAVVVKNGNIIGQGYHHQYGG----PHAEV 53 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++ + +YVTLEPC CA I + I+R +P Sbjct: 54 YALQEAG-----TEAKDATIYVTLEPCSHYGKTPPCAKKIIDSGIKRCIIAMEDPNPLVA 108 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G A ++ G+ E +R + + F K Sbjct: 109 GKGIAMMKEAG----IQVEVGLCETEARVLNRVFLK 140 >gi|326203162|ref|ZP_08193028.1| CMP/dCMP deaminase zinc-binding [Clostridium papyrosolvens DSM 2782] gi|325986808|gb|EGD47638.1| CMP/dCMP deaminase zinc-binding [Clostridium papyrosolvens DSM 2782] Length = 137 Score = 99 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 33/84 (39%), Positives = 42/84 (50%), Gaps = 1/84 (1%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP-EVDLYVTLEPCT 84 AV I+S+ R+ D TAHAEI AIR C+ L ++LP LY T EPC Sbjct: 15 FAAVIDAEGNIVSKGKTTVRDDHDPTAHAEINAIRSACKRLKVDVLPKGYWLYSTFEPCP 74 Query: 85 MCAAAISLARIRRLYYGASNPKGG 108 +CAAAI A + Y + G Sbjct: 75 LCAAAIIWAGFEGVVYANNADHRG 98 >gi|317052209|ref|YP_004113325.1| riboflavin biosynthesis protein RibD [Desulfurispirillum indicum S5] gi|316947293|gb|ADU66769.1| riboflavin biosynthesis protein RibD [Desulfurispirillum indicum S5] Length = 377 Score = 99 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 55/147 (37%), Gaps = 24/147 (16%) Query: 8 MSCALEEAQNAA---LRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M AL A+ N + VG+V V I+ + + AHAE++A++ Sbjct: 11 MQMALNLARKGLGFTSPNPV-VGSVIVDAAGAIVGMGYHAKAGM----AHAEVVALKDAG 65 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 LYVTLEPC C AI A I+++ Y A +P Sbjct: 66 EKA-----RGATLYVTLEPCCVQGRTPPCTDAIIRAGIQKVVYAAQDPNPAVAGRSRAIL 120 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 A + GI E +R + + F Sbjct: 121 EAAG----IAVESGILEPEARYLNRHF 143 >gi|327179698|gb|AEA30246.1| putative cytosine/adenosine deaminase [Streptomyces sp. Acta 2897] Length = 159 Score = 99 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 42/94 (44%) Query: 10 CALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A+ ++ + IP V V + +I+ NR RE D TAHAE++A+R Sbjct: 14 EAVRISREHVAQGGIPFSGVVVGSGRILGTGFNRVREDNDPTAHAEVVALREATTKYGIH 73 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + L + EPC +C A A I + + A Sbjct: 74 AVAGATLIASGEPCALCYLAARYAGIGHIVHAAD 107 >gi|325109372|ref|YP_004270440.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Planctomyces brasiliensis DSM 5305] gi|324969640|gb|ADY60418.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Planctomyces brasiliensis DSM 5305] Length = 377 Score = 99 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 22/146 (15%) Query: 8 MSCALEEAQNAALRNEI-P-VGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M ALE A+ E P VGAV V N ++I+ + + HAE+ A+R Sbjct: 12 MQRALELARQGEGFVEPNPCVGAVVVDENLQLIAEGYH--EQYGGP--HAEVQALRNAG- 66 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + ++VTLEPC C+ A+ A I R++ G +P G + Sbjct: 67 ----DRARGAWIFVTLEPCNHHGKTPPCSEAVIQAGIERVFIGCLDPAAHEKRQGAERLR 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ +Q + ++++ F Sbjct: 123 EAGL----QVEVGLCQQEAERLLRPF 144 >gi|126178774|ref|YP_001046739.1| cytosine deaminase [Methanoculleus marisnigri JR1] gi|125861568|gb|ABN56757.1| Cytosine deaminase [Methanoculleus marisnigri JR1] Length = 140 Score = 99 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 43/141 (30%), Positives = 61/141 (43%), Gaps = 12/141 (8%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 M CA+EEA+ IP+G+V V + +II R NR + D HAEI +R RI S Sbjct: 1 MKCAVEEAEAGLREGGIPIGSVLVRDGRIIGRGRNRRVQNDDPVLHAEIDCLRNAGRIGS 60 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 E LY TL PC +CA A I ++ G S G E H E Sbjct: 61 ---YAECTLYSTLMPCYLCAGAAVQFGIGKVVAGESVNFAGAREFLES--------HGVE 109 Query: 128 IYPGISEQRSRQIIQDFFKER 148 + + + ++ F ++ Sbjct: 110 VLD-LDLDVCKAMMGTFIEQH 129 >gi|326793664|ref|YP_004311484.1| CMP/dCMP deaminase zinc-binding protein [Marinomonas mediterranea MMB-1] gi|326544428|gb|ADZ89648.1| CMP/dCMP deaminase zinc-binding protein [Marinomonas mediterranea MMB-1] Length = 162 Score = 99 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 52/147 (35%), Gaps = 10/147 (6%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62 + A++A + P A+ + +I+ N D+T HAE + Sbjct: 11 DTQLLKKTFRLAEDAKQKGIHPFAAILADDQGQILMDQINGYLPDLDMTGHAERKLMTRA 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG------TQF 116 + + L + LY++ EPC MCA + A + R+ YG S + I Sbjct: 71 SKAYRPDFLAKCTLYISAEPCAMCAGSAYWAGVGRVVYGLSEARLKRITGNHPENPTLDL 130 Query: 117 YTLATCH---HSPEIYPGISEQRSRQI 140 + E+ E + ++ Sbjct: 131 PCRTVFNSGQRDVEVLGPCLEDEAAKL 157 >gi|33519699|ref|NP_878531.1| bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis [Candidatus Blochmannia floridanus] gi|33517362|emb|CAD83747.1| bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis [Candidatus Blochmannia floridanus] Length = 378 Score = 99 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 55/157 (35%), Gaps = 23/157 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +++S A A+ +P VG V V NK+I + HAEI A Sbjct: 8 DNDLIYLSRAFRLARKGRFTT-MPNPNVGCVIVKENKVIGEGYHIRAGED----HAEIHA 62 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R+ + +YVTLEPC C A+ + I+ + +P Sbjct: 63 LRIAG-----DSARGATVYVTLEPCSHYGRTPPCTTALINSGIKCVVISMLDPDPEIKGR 117 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G + + + + + I + F K R Sbjct: 118 GVRLLQESGIL----VRHSLMLSEAEHINKGFIKRIR 150 >gi|229110810|ref|ZP_04240373.1| Riboflavin biosynthesis protein [Bacillus cereus Rock1-15] gi|228672689|gb|EEL27970.1| Riboflavin biosynthesis protein [Bacillus cereus Rock1-15] Length = 348 Score = 99 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 19/125 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +N+I+ + HAEI AIRM E + +YVTLEPC+ Sbjct: 11 VGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMAG-----EQVRGATIYVTLEPCSH 61 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA AI A I+++ +P G + A E+ G+ E+ S++ Sbjct: 62 HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAG----IEVLVGVCEEESKK 117 Query: 140 IIQDF 144 + + F Sbjct: 118 VNEVF 122 >gi|331656468|ref|ZP_08357430.1| riboflavin biosynthesis protein RibD [Escherichia coli TA206] gi|315299580|gb|EFU58828.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 16-3] gi|331054716|gb|EGI26725.1| riboflavin biosynthesis protein RibD [Escherichia coli TA206] Length = 367 Score = 99 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 59/155 (38%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATVYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|295698401|ref|YP_003603056.1| riboflavin biosynthesis protein RibD [Candidatus Riesia pediculicola USDA] gi|291157057|gb|ADD79502.1| riboflavin biosynthesis protein RibD [Candidatus Riesia pediculicola USDA] Length = 373 Score = 99 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 21/154 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 K FMS A+ A+ + P VG V V NN+I+ + + +HAE+LA+ Sbjct: 3 DKDRQFMSRAIFLAKKGKFTTSPNPNVGCVIVQNNRIVGESYHSKTGE----SHAEVLAM 58 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + L +YVTLEPC C + A+I +++ ++P +G Sbjct: 59 KKAGHF-----LKGATVYVTLEPCNHYGLTPPCVDELINAKISKIFVSMTDPNPKV--SG 111 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L ++ G+ + S +I F K Sbjct: 112 KSLIKLKKS--GVQVISGLLKDESEKINLGFIKR 143 >gi|319795221|ref|YP_004156861.1| cmp/dcmp deaminase zinc-binding protein [Variovorax paradoxus EPS] gi|315597684|gb|ADU38750.1| CMP/dCMP deaminase zinc-binding protein [Variovorax paradoxus EPS] Length = 158 Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 57/163 (34%), Gaps = 20/163 (12%) Query: 1 MKKGNVF--MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEI 56 M + + + A E A+ A P GAV V + I++ GN D HAE Sbjct: 1 MNQDQIIRALRRADEVARRAMAMGRHPFGAVLVAPDGETILAEQGN-----IDTVNHAEA 55 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----- 111 R + E L + L T EPC MCA A I R+ YGA + Sbjct: 56 TLARHAAQNWPAEYLWQCTLVTTFEPCAMCAGTSYWANIGRVVYGAEESALLALTGDHPE 115 Query: 112 ----NGTQFYTLATCHHSPEIYPGISE--QRSRQIIQDFFKER 148 + A E+ + E + + F++ R Sbjct: 116 NPTLSLPCREVFARGQKKVEVIGPVPEAAEEMIATHRGFWETR 158 >gi|226942824|ref|YP_002797897.1| riboflavin biosynthesis protein RibD [Azotobacter vinelandii DJ] gi|226717751|gb|ACO76922.1| riboflavin biosynthesis protein RibD [Azotobacter vinelandii DJ] Length = 361 Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 52/148 (35%), Gaps = 21/148 (14%) Query: 8 MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ ALE A+ VG V V +I+ + HAE+ A+R Sbjct: 1 MARALELARQGLYSTHPNPRVGCVIVAAGRIVGEGWHVRAGE----PHAEVHALRQAG-- 54 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E YVTLEPC CA A+ A + R+ +P G Sbjct: 55 ---ETARGATAYVTLEPCSHHGRTPPCAEALVAAGVGRVVAAMQDPNPQVSGRGLARLRQ 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + F K Sbjct: 112 AG----IEVEVGVLEAEARALNAGFVKR 135 >gi|226324153|ref|ZP_03799671.1| hypothetical protein COPCOM_01931 [Coprococcus comes ATCC 27758] gi|225207702|gb|EEG90056.1| hypothetical protein COPCOM_01931 [Coprococcus comes ATCC 27758] Length = 67 Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 34/62 (54%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + +M A+ +A+ A E+P+G V V KII R NR K+ AHAEI AI+ Sbjct: 5 LTEDEKYMKEAIRQAKKAWKIEEVPIGCVIVYQGKIIGRGYNRRTTDKNPLAHAEISAIK 64 Query: 61 MG 62 G Sbjct: 65 KG 66 >gi|260464042|ref|ZP_05812237.1| CMP/dCMP deaminase zinc-binding [Mesorhizobium opportunistum WSM2075] gi|259030213|gb|EEW31494.1| CMP/dCMP deaminase zinc-binding [Mesorhizobium opportunistum WSM2075] Length = 156 Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 8/109 (7%) Query: 1 MKKGNVF--MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57 M + +F + A + A++AA P G V V +++I+ GN HAE Sbjct: 1 MTRDRMFAHLRAANDVARDAAAHGHHPFGCVLVGPDDRILMGQGN-----ISTVRHAETK 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 R E L L T EPC MC + A I RL YG K Sbjct: 56 LARRAADAYPPEFLWSCTLVSTGEPCAMCTGTLYWANIGRLVYGFEETK 104 >gi|28900546|ref|NP_800201.1| putative riboflavin deaminase [Vibrio parahaemolyticus RIMD 2210633] gi|260365428|ref|ZP_05777965.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus K5030] gi|260877493|ref|ZP_05889848.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus AN-5034] gi|260894835|ref|ZP_05903331.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus Peru-466] gi|28808926|dbj|BAC62034.1| putative riboflavin deaminase [Vibrio parahaemolyticus RIMD 2210633] gi|308085328|gb|EFO35023.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus Peru-466] gi|308090602|gb|EFO40297.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus AN-5034] gi|308114425|gb|EFO51965.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus K5030] Length = 141 Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 21/144 (14%) Query: 7 FMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM ALE ++NA + PVG V V +N+I+S + HAE+ A+ Sbjct: 5 FMRRALEVSKNALPECQPNPPVGCVLVKDNQIVSEGHTQAIGGN----HAEVEALNA--- 57 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 Q L V YVTLEPC CA + + I ++ +P G + Sbjct: 58 --YQGSLESVTAYVTLEPCSFVGRTPACAVTLVKSGIGKVVVAMLDPDPRNSGRGIEILK 115 Query: 119 LATCHHSPEIYPGISEQRSRQIIQ 142 A E+ G+ + + + Sbjct: 116 QAG----IEVEIGLCSEEVSEFLT 135 >gi|229061784|ref|ZP_04199117.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH603] gi|228717530|gb|EEL69194.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH603] Length = 379 Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ AQ + + P VGAV V ++ I+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAQGTSGQTSPNPMVGAVVVKDSNIVGMGAHMRAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M E +YVTLEPC C + ++R+ + NG Sbjct: 67 MAG-----ERAKGATVYVTLEPCSHFGKTPPCCELLIEKEVQRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A E+ G+ E + + + FF Sbjct: 122 RKLEEAA----IEVTTGVLEAEATLLNRYFF 148 >gi|228953669|ref|ZP_04115709.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229070840|ref|ZP_04204068.1| Riboflavin biosynthesis protein [Bacillus cereus F65185] gi|229179672|ref|ZP_04307022.1| Riboflavin biosynthesis protein [Bacillus cereus 172560W] gi|228603778|gb|EEK61249.1| Riboflavin biosynthesis protein [Bacillus cereus 172560W] gi|228712230|gb|EEL64177.1| Riboflavin biosynthesis protein [Bacillus cereus F65185] gi|228805903|gb|EEM52482.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 350 Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +N+I+ + HAEI AIRM E +YVTLEPC+ Sbjct: 11 VGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMAG-----EQARGGTIYVTLEPCSH 61 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA AI A I+++ +P G + A E+ G+ E+ S++ Sbjct: 62 HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAG----IEVLVGVCEEESKK 117 Query: 140 IIQDF 144 + + F Sbjct: 118 MNEVF 122 >gi|55981033|ref|YP_144330.1| diaminohydroxyphosphoriboxylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD [Thermus thermophilus HB8] gi|55772446|dbj|BAD70887.1| diaminohydroxyphosphoriboxylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase (RibD) [Thermus thermophilus HB8] Length = 377 Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 55/155 (35%), Gaps = 23/155 (14%) Query: 1 MKK-GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M+ F+ AL+ A+ A P VGAV V +I+ + HAE+ Sbjct: 1 MRDLDERFLRRALQLAERARGHTSPNPLVGAVLVREGRIVGEGFHPRAGE----PHAEVF 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A++ + YVTLEPC C+ A+ A + R+ A Sbjct: 57 ALQQAGELA-----RGATAYVTLEPCDHFGRTPPCSLALLQAGVSRVVVAAREENPVAKG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + ++ G+ E +R + FF Sbjct: 112 GLERLRAG-----GVQVEAGLLEAEARAQNEVFFA 141 >gi|91209482|ref|YP_539468.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli UTI89] gi|117622675|ref|YP_851588.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli APEC O1] gi|218557323|ref|YP_002390236.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli S88] gi|237707592|ref|ZP_04538073.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Escherichia sp. 3_2_53FAA] gi|91071056|gb|ABE05937.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli UTI89] gi|115511799|gb|ABI99873.1| bifunctional pyrimidine deaminase/reductase [Escherichia coli APEC O1] gi|218364092|emb|CAR01757.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli S88] gi|226898802|gb|EEH85061.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Escherichia sp. 3_2_53FAA] gi|294490690|gb|ADE89446.1| riboflavin biosynthesis protein RibD [Escherichia coli IHE3034] gi|315289871|gb|EFU49261.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 110-3] gi|323952974|gb|EGB48842.1| riboflavin biosynthesis protein RibD [Escherichia coli H252] gi|323958607|gb|EGB54310.1| riboflavin biosynthesis protein RibD [Escherichia coli H263] Length = 367 Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVQALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|91225503|ref|ZP_01260625.1| putative riboflavin deaminase [Vibrio alginolyticus 12G01] gi|269968858|ref|ZP_06182841.1| putative riboflavin deaminase [Vibrio alginolyticus 40B] gi|91189866|gb|EAS76139.1| putative riboflavin deaminase [Vibrio alginolyticus 12G01] gi|269826538|gb|EEZ80889.1| putative riboflavin deaminase [Vibrio alginolyticus 40B] Length = 141 Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 21/144 (14%) Query: 7 FMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM ALE ++NA + PVG V V +N+I+S + HAE+ A+ Sbjct: 5 FMRRALEVSKNALPECQPNPPVGCVLVKDNQIVSEGHTQAIGGN----HAEVEALNA--- 57 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 Q L V YVTLEPC CA + + I ++ +P G + Sbjct: 58 --YQGSLESVTAYVTLEPCSFVGRTPACAVTLVKSGISKVVVAILDPDPRNSGRGIEILK 115 Query: 119 LATCHHSPEIYPGISEQRSRQIIQ 142 A E+ G+ + + + Sbjct: 116 QAG----IEVETGLCGEEVSEFLT 135 >gi|229092353|ref|ZP_04223525.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-42] gi|228691055|gb|EEL44822.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-42] Length = 350 Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +N+I+ + HAEI AIRM E +YVTLEPC+ Sbjct: 11 VGSVIVNDNRIVGIGAHMKAGE----PHAEIHAIRMAG-----EQARGGTIYVTLEPCSH 61 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA AI A I+++ +P G + A E+ G+ E+ S++ Sbjct: 62 HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAG----IEVLVGVCEEESKK 117 Query: 140 IIQDF 144 + + F Sbjct: 118 MNEVF 122 >gi|110598673|ref|ZP_01386938.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM 13031] gi|110339726|gb|EAT58236.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM 13031] Length = 192 Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 56/149 (37%), Gaps = 12/149 (8%) Query: 8 MSCALEEAQNAALRN-EIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M +E A+ L P GA + ++S N AHAE++AI + + Sbjct: 32 MQFIIELARKNTLHGTGGPFGAAVFERKSGNLVSIGVNLVVRSCCSHAHAEMVAIAIAQK 91 Query: 65 ILSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 ++ L P+ +L + EPC MC AI + I RL GAS Sbjct: 92 KINSWTLNHAKSPQHELVTSCEPCAMCFGAIIWSGISRLVCGASTADATAAGFDEGPKPE 151 Query: 120 ATCH----HSPEIYPGISEQRSRQIIQDF 144 E+ GI ++ + +D+ Sbjct: 152 KWIEELEKRGIEVVTGICSNDAKMVFRDY 180 >gi|229031753|ref|ZP_04187746.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH1271] gi|228729637|gb|EEL80624.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH1271] Length = 379 Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + ++R+ + NG Sbjct: 67 MAGEKA-----KGATVYVTLEPCSHFGKTPPCCELLIEKEVKRVVIATLDCNPLVSGNGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A ++ G+ E + + + FF K +R Sbjct: 122 KRLEEAG----IDVTTGVLEAEATLLNRFFFHYMKTKR 155 >gi|59711307|ref|YP_204083.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Vibrio fischeri ES114] gi|59479408|gb|AAW85195.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Vibrio fischeri ES114] Length = 372 Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 53/151 (35%), Gaps = 21/151 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + ++ M A+ A+ P VG V V N KII + HAE+ A+ Sbjct: 5 TQDHLMMQKAILLAKQGIYTTAPNPNVGCVLVKNGKIIGEGAHLKAGE----PHAEVHAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + YVTLEPC CA + A ++++ +P G Sbjct: 61 RQAGKEAQ-----GATAYVTLEPCSHYGRTPPCAEGLIKAGVKKVICAMVDPNPQVAGRG 115 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E G+ E +R + F Sbjct: 116 LAMLDEAG----IETASGLLEADARALNPHF 142 >gi|47222036|emb|CAG08291.1| unnamed protein product [Tetraodon nigroviridis] Length = 306 Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 30/144 (20%) Query: 22 NEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL-------- 71 PVGA V + +++ R HA ++ I + R Sbjct: 168 GMEPVGAAVVDPATDTLVAVGH-DCRADH-PLHHAVMVCIDLVARSQGGGRYCFRKYPSC 225 Query: 72 -------------PEVDLYVTLEPCTMCAAAISLARIRRLYYGA--SNPKGGGIENGTQF 116 +DLYVT EPC MCA A+ +RI R++YG S+ G + + Sbjct: 226 RLARLDAAQPYICTGLDLYVTREPCVMCAMALVHSRIGRVFYGTVWSD---GALGTKYKI 282 Query: 117 YTLATCHHSPEIYPGISEQRSRQI 140 ++ +H E++ G+ +R ++ Sbjct: 283 HSQKDLNHRFEVFRGVLGRRCEEL 306 >gi|229191491|ref|ZP_04318474.1| Riboflavin biosynthesis protein [Bacillus cereus ATCC 10876] gi|228591971|gb|EEK49807.1| Riboflavin biosynthesis protein [Bacillus cereus ATCC 10876] Length = 350 Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG+V V +N+I+ + HAEI AIRM E +YVTLEPC+ Sbjct: 11 VGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMAG-----EQARGGTIYVTLEPCSH 61 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA AI A I+++ +P G + A E+ G+ E+ S++ Sbjct: 62 HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAG----IEVLVGVCEEESKK 117 Query: 140 IIQDF 144 + + F Sbjct: 118 MNEVF 122 >gi|297191042|ref|ZP_06908440.1| cytidine/deoxycytidine deaminase [Streptomyces pristinaespiralis ATCC 25486] gi|197721517|gb|EDY65425.1| cytidine/deoxycytidine deaminase [Streptomyces pristinaespiralis ATCC 25486] Length = 158 Score = 99.2 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 F+ A+ A +A + P G++ V + ++ A N + D++AH E+ R Sbjct: 21 DAAFLRRAVAIAAHAVTLGDAPYGSLLVGPDGATLAEAHNTVQRDNDISAHPELKLARWA 80 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 R L ++ LY + +PC MC I + + R+ Y S Sbjct: 81 ARELDKDTASGTTLYTSCQPCGMCTGGIVRSGLGRVVYALS 121 >gi|268317615|ref|YP_003291334.1| riboflavin biosynthesis protein RibD [Rhodothermus marinus DSM 4252] gi|262335149|gb|ACY48946.1| riboflavin biosynthesis protein RibD [Rhodothermus marinus DSM 4252] Length = 368 Score = 99.2 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 55/146 (37%), Gaps = 17/146 (11%) Query: 8 MSCALEEA-QNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M LE A + A + P VGAV V + ++++ + HAE +AI R Sbjct: 1 MVRCLELAFRGAGRVSPNPMVGAVLVDTDGQVLAEGWHDRYGG----PHAERVAIEEALR 56 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 E L LYV LEPC CA I I R+ G +P G Sbjct: 57 RHGPEALRRATLYVNLEPCAHYGKTPPCADFIITHGIPRVVVGMVDPFPQVAGRGIARLR 116 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144 H ++ G+ E R+ + F Sbjct: 117 A----HGVQVEVGVLEAACRRFNEAF 138 >gi|328470490|gb|EGF41401.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio parahaemolyticus 10329] Length = 141 Score = 99.2 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 21/144 (14%) Query: 7 FMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM ALE ++NA + PVG V V +N+I+S + HAE+ A+ Sbjct: 5 FMRRALEVSKNALPECQPNPPVGCVLVKDNQIVSEGHTQAIGGN----HAEVEALNA--- 57 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 Q L V YVTLEPC CA + + I ++ +P G + Sbjct: 58 --YQGSLESVTAYVTLEPCSFVGRTPACAVTLVKSGIGKVVVAMLDPDPRNSGRGIEILK 115 Query: 119 LATCHHSPEIYPGISEQRSRQIIQ 142 A E+ G+ + + + Sbjct: 116 QAG----IEVEIGLCGEEVSEFLT 135 >gi|254515088|ref|ZP_05127149.1| cytosine deaminase [gamma proteobacterium NOR5-3] gi|219677331|gb|EED33696.1| cytosine deaminase [gamma proteobacterium NOR5-3] Length = 166 Score = 99.2 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 56/148 (37%), Gaps = 13/148 (8%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 + A E+A+ +PVGA N K++S NR + D + H E A R Sbjct: 16 TDYQAMLGVAFEQAKRGFEEGGVPVGAAMFDGNGKLLSVGRNRRVQEGDPSIHGETDAFR 75 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R Q+ + L TL PC C+ + RI + G S G + + A Sbjct: 76 KAGR---QKNYRDCVLVSTLAPCWYCSGLVRQFRIGTVVVGESQNFAGHL----DWLREA 128 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKER 148 + +++ R ++ F + R Sbjct: 129 G----VRVIE-LNDPRCTALMASFIERR 151 >gi|156186024|gb|ABU55330.1| cytidine and deoxycytidylate deaminase family protein [Callosobruchus chinensis] Length = 71 Score = 99.2 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 39/71 (54%), Positives = 48/71 (67%), Gaps = 3/71 (4%) Query: 35 KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 ++S A N D TAHAE+ AI+ C +LS L + D+YVTLEPC MCA AIS AR Sbjct: 4 NVVSSAHN---ISNDPTAHAEMFAIKQECELLSTSTLYDSDIYVTLEPCPMCAQAISFAR 60 Query: 95 IRRLYYGASNP 105 I+RLY+GA NP Sbjct: 61 IKRLYFGAYNP 71 >gi|254229831|ref|ZP_04923237.1| Pyrimidine deaminase [Vibrio sp. Ex25] gi|262395603|ref|YP_003287456.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio sp. Ex25] gi|151937667|gb|EDN56519.1| Pyrimidine deaminase [Vibrio sp. Ex25] gi|262339197|gb|ACY52991.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio sp. Ex25] Length = 141 Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 37/146 (25%), Positives = 58/146 (39%), Gaps = 21/146 (14%) Query: 5 NVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + FM ALE ++NA + PVG V V +N+I+S + HAE+ A+ Sbjct: 3 HEFMRRALEVSKNALPECQPNPPVGCVLVKDNQIVSEGHTQAIGGN----HAEVEALNA- 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 Q L V YVTLEPC CA + + I ++ +P G + Sbjct: 58 ----YQGSLESVTAYVTLEPCSFVGRTPACAVTLVKSGIGKVVVAMLDPDPRNSGRGIEI 113 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQ 142 A E+ G+ + + + Sbjct: 114 LKQAG----IEVEIGLCGEEVSEFLT 135 >gi|239905200|ref|YP_002951939.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Desulfovibrio magneticus RS-1] gi|239795064|dbj|BAH74053.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Desulfovibrio magneticus RS-1] Length = 381 Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 42/156 (26%), Positives = 60/156 (38%), Gaps = 29/156 (18%) Query: 2 KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 VFM+ ALE A+ R + P VGAV V + I++ ++ HAE+ Sbjct: 4 DNDAVFMARALELAERG--RGFVTPNPRVGAVLVRDGAIVAEGWHKVFGG----PHAEVE 57 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK---GG 108 +R +YVTLEPC C+ + A + R+ G +P GG Sbjct: 58 CLREAEERGIDP--AGATMYVTLEPCNHFGKTPPCSRTVLEAGVSRVVIGCLDPNPVAGG 115 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G E Q + GI Q R + DF Sbjct: 116 GAETLRQ--------GGVAVDVGILGQECRDAVADF 143 >gi|24217029|ref|NP_714510.1| cytidine deaminase [Leptospira interrogans serovar Lai str. 56601] gi|24198438|gb|AAN51528.1| cytidine deaminase [Leptospira interrogans serovar Lai str. 56601] Length = 201 Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 2/131 (1%) Query: 19 ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78 R EIP K+IS N + D + H+EIL IR L L + L Sbjct: 69 RDREEIPSFTRIYHKEKLISETFNEVEKKSDSSFHSEILCIRNAKEKLKTRYLADCMLIT 128 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 +LEPC MCA I L+RI ++ Y +G GI + + + + PE++ I + S+ Sbjct: 129 SLEPCLMCAGTILLSRIPKVVYLLPAKQGEGISS-LSIEMIYSRNFFPELFC-IPTEISK 186 Query: 139 QIIQDFFKERR 149 + FFK RR Sbjct: 187 NAFKSFFKVRR 197 >gi|319775121|ref|YP_004137609.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae F3047] gi|329122965|ref|ZP_08251536.1| riboflavin biosynthesis protein RibD [Haemophilus aegyptius ATCC 11116] gi|317449712|emb|CBY85919.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae F3047] gi|327471896|gb|EGF17336.1| riboflavin biosynthesis protein RibD [Haemophilus aegyptius ATCC 11116] Length = 372 Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + VFM AL+ A P VG V V N +I+ + + HAE +A+ Sbjct: 6 SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 E YVTLEPC CA + A + ++ +P G Sbjct: 62 AQAG-----ENAKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + A + + ++ +I + F K R Sbjct: 117 LKMLSDAGIESAVN----LLNDQAEKINKGFLKRMR 148 >gi|301169668|emb|CBW29269.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Haemophilus influenzae 10810] Length = 372 Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + VFM AL+ A P VG V V N +I+ + + HAE +A+ Sbjct: 6 SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 E YVTLEPC CA + A + ++ +P G Sbjct: 62 AQAG-----ENAKGATAYVTLEPCAHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + A + + ++ +I + F K R Sbjct: 117 LKMLSDAGIESAVN----LLNDQAEKINKGFLKRMR 148 >gi|148828121|ref|YP_001292874.1| hypothetical protein CGSHiGG_08285 [Haemophilus influenzae PittGG] gi|148719363|gb|ABR00491.1| hypothetical protein CGSHiGG_08285 [Haemophilus influenzae PittGG] Length = 372 Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + VFM AL+ A P VG V V N +I+ + + HAE +A+ Sbjct: 6 SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 E YVTLEPC CA + A + ++ +P G Sbjct: 62 AQAG-----ENAKGATAYVTLEPCAHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + A + + ++ +I + F K R Sbjct: 117 LKMLSDAGIESAVN----LLNDQAEKINKGFLKRMR 148 >gi|68249531|ref|YP_248643.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae 86-028NP] gi|68057730|gb|AAX87983.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae 86-028NP] Length = 372 Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + VFM AL+ A P VG V V N +I+ + + HAE +A+ Sbjct: 6 SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 E YVTLEPC CA + A + ++ +P G Sbjct: 62 AQAG-----ENAKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + A + + ++ +I + F K R Sbjct: 117 LKMLSDAGIESAVN----LLNDQAEKINKGFLKRMR 148 >gi|323699086|ref|ZP_08110998.1| riboflavin biosynthesis protein RibD [Desulfovibrio sp. ND132] gi|323459018|gb|EGB14883.1| riboflavin biosynthesis protein RibD [Desulfovibrio desulfuricans ND132] Length = 364 Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 36/145 (24%), Positives = 53/145 (36%), Gaps = 19/145 (13%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ A+E A P VGAV V + I++ + HAE + R Sbjct: 1 MARAVELAGRGRGATAPNPCVGAVLVRDGVIVAEGWHTRFGRL----HAERECLADARRK 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +YVTLEPC C A+ A + ++ G +P + Sbjct: 57 GVDPR--GAAMYVTLEPCNHHGKTPPCTEALIEAGVAEVFVGTRDPNPVAAGGVEKLRA- 113 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 H E+ G+ EQ R +I DF Sbjct: 114 ----HGIEVTVGVLEQPCRDLIADF 134 >gi|319760369|ref|YP_004124307.1| riboflavin biosynthesis protein RibD [Candidatus Blochmannia vafer str. BVAF] gi|318039083|gb|ADV33633.1| riboflavin biosynthesis protein RibD [Candidatus Blochmannia vafer str. BVAF] Length = 383 Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 54/156 (34%), Gaps = 23/156 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + ++S A + A+ +P VG V V +N +I + HAEI A+ Sbjct: 8 EDIGYLSRAFQLARKGRFTT-MPNPNVGCVIVKDNHVIGEGYHMRAGEN----HAEINAL 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + YVTLEPC C A+ + I+R+ +P G Sbjct: 63 SVAGNFA-----KGATAYVTLEPCSHYGRTPPCTTALIKSGIKRVVVSMLDPHPDLTGRG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 Q + + I + I + F K R Sbjct: 118 IQLLKQSGIL----VSHSIMLSEAESINKGFIKRIR 149 >gi|94265528|ref|ZP_01289276.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase-like [delta proteobacterium MLMS-1] gi|93453969|gb|EAT04315.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase-like [delta proteobacterium MLMS-1] Length = 374 Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 57/152 (37%), Gaps = 22/152 (14%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL EA+ P VGAV V N +++ + +R HA Sbjct: 5 DLTYMRLALAEARKGVGKTAPNPCVGAVVVKNGRVVGKGWHRKIGQ----PHA-----EA 55 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + E +YVTLEPC C+ AI A IRR+ YG ++P + Sbjct: 56 EALRAAGEAAAGATIYVTLEPCNHHGRTPPCSEAIIAAGIRRVVYGLADPHEVARGGAKR 115 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + E+ G+ R++ F K Sbjct: 116 LESA-----GLEVLGGVLADECRRLNLPFIKR 142 >gi|37679045|ref|NP_933654.1| pyrimidine reductase [Vibrio vulnificus YJ016] gi|37197787|dbj|BAC93625.1| pyrimidine reductase [Vibrio vulnificus YJ016] Length = 368 Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M A+ A+ P VG V + + +I+ + HAE+ A+RM Sbjct: 8 DRQMMLRAIALAKRGLYTTAPNPNVGCVLLRDGEIVGEGFHFRAGE----PHAEVHAMRM 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA + A + R+ +P G Sbjct: 64 AADKA-----KGATAYVTLEPCSHYGRTPPCAEGLIKAGVSRVVCAMEDPNPQVAGRGFA 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ + + + F K Sbjct: 119 MLREAG----IEVSVGLLQAEAEALNPAFIKR 146 >gi|226364615|ref|YP_002782397.1| cytosine deaminase [Rhodococcus opacus B4] gi|226243104|dbj|BAH53452.1| cytosine deaminase [Rhodococcus opacus B4] Length = 159 Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 15/143 (10%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 ++ A+ EA+ IP+GA + ++ R NR + D + H E A R R Sbjct: 18 LAVAIAEAELGRREGGIPIGAALFAGDGTLLGRGRNRRVQHGDPSVHGETDAFRAAGR-- 75 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 Q + TL PC C+ + I + G S GG + Sbjct: 76 -QRDYRSTIMVTTLSPCWYCSGLVRQFNIGAIVVGESVTFTGG----HDWLRDNG----V 126 Query: 127 EIYPGISEQR-SRQIIQDFFKER 148 ++ + + ++ +F + R Sbjct: 127 DVT--VLRDQHCIDLMTEFIQAR 147 >gi|326328847|ref|ZP_08195181.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Nocardioidaceae bacterium Broad-1] gi|325953332|gb|EGD45338.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Nocardioidaceae bacterium Broad-1] Length = 162 Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 10/151 (6%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 + LE A A + P G+V + + NR D TAH EI R Sbjct: 8 TDMTHLRRCLELAAEALADGDGPFGSVLADSAGNALQEGRNREHTTGDPTAHPEIELARW 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-------GGGIENGT 114 L +Y + E C MC+AA + + R+ Y AS+ + G E+ Sbjct: 68 AAIQLDPATRAGATVYTSGEHCPMCSAAHGWSGVGRIVYIASSEQLTQWRAGWGAGESPV 127 Query: 115 QFYTLATCHHSPEIYPGISE--QRSRQIIQD 143 + + + E+ + E + + Q Sbjct: 128 RALPIQEVAPAVEVIGPVPELVEEIHALHQQ 158 >gi|110835035|ref|YP_693894.1| (S)-2-hydroxy-fatty-acid dehydrogenase [Alcanivorax borkumensis SK2] gi|110648146|emb|CAL17622.1| (S)-2-hydroxy-fatty-acid dehydrogenase [Alcanivorax borkumensis SK2] Length = 377 Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 55/149 (36%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M+ AL+ A+ + P VG V V + ++ + T HAE A+ Sbjct: 7 DHQYMARALQLARRGLYTTDPNPRVGCVLVRDGAVVGEGFHARA----GTPHAERHALAQ 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC+ CA A+ A + R+ +P G Q Sbjct: 63 AG-----ERARGATAYVTLEPCSHTGRTGPCADALIDAGVTRVVAAMEDPNPLVAGQGLQ 117 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + G+ E +R + F Sbjct: 118 RLADAGIATAV----GLLEAEARALNPGF 142 >gi|152980375|ref|YP_001354124.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Janthinobacterium sp. Marseille] gi|151280452|gb|ABR88862.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Janthinobacterium sp. Marseille] Length = 363 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 54/144 (37%), Gaps = 18/144 (12%) Query: 9 SCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 ALE A P VG V V NK+I + AHAE+ A+ Sbjct: 11 RLALELAAKGMFTTTPNPRVGCVIVKENKVIGSGYTQPVGH----AHAEVQALNDAADR- 65 Query: 67 SQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + +YVTLEPC CA A+ AR+ R+ ++P G A Sbjct: 66 -GFDVSGSTVYVTLEPCSHHGRTPPCADALIKARVARVVAAIADPNPLVAGQGLARLEAA 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144 ++ G+ E +R++ F Sbjct: 125 G----IQVSCGVLEAEAREMNIGF 144 >gi|329898131|ref|ZP_08272333.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [gamma proteobacterium IMCC3088] gi|328920911|gb|EGG28343.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [gamma proteobacterium IMCC3088] Length = 361 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 54/145 (37%), Gaps = 21/145 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ A++ P VG V V + +I+ + HAE++A+ Sbjct: 1 MQRAINLAEHGKYSAKPNPHVGCVIVKDGQIVGEGYTQPPGQG----HAEVMALAQAG-- 54 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E YVTLEPC C+ A+ A I ++ +P +G + Sbjct: 55 ---EQARGATAYVTLEPCNHQGRTGPCSQALIQAGISKVVAAIEDPYPEVAGSGFEALKH 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ +Q +Q F Sbjct: 112 AG----IEVRVGLLADTVKQQLQGF 132 >gi|229513912|ref|ZP_04403374.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae TMA 21] gi|229349093|gb|EEO14050.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae TMA 21] Length = 367 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 64 AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E+ +R + + F K Sbjct: 119 MLRDAG----IEVEVGLLEEDARALNRGFLKR 146 >gi|156186022|gb|ABU55329.1| cytidine and deoxycytidylate deaminase family protein [Callosobruchus chinensis] Length = 71 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 3/71 (4%) Query: 35 KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 ++S A N D TAHAE+LAI+ C +LS L + D+YVTLEPC MCA AIS A Sbjct: 4 NVVSSAHN---ISNDPTAHAEMLAIKQECELLSTSTLYDSDIYVTLEPCPMCAQAISFAG 60 Query: 95 IRRLYYGASNP 105 I+R Y+GA NP Sbjct: 61 IKRFYFGAYNP 71 >gi|149909347|ref|ZP_01898003.1| Putative pyrimidine deaminase/pyrimidine reductase [Moritella sp. PE36] gi|149807664|gb|EDM67612.1| Putative pyrimidine deaminase/pyrimidine reductase [Moritella sp. PE36] Length = 440 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 53/156 (33%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ M A+ AQ P VG V V +K+I + AHAE+ A+ Sbjct: 42 DTDHLHMQRAIALAQKGRFTTAPNPNVGCVLVKADKVIGEGFHLRAGE----AHAEVHAL 97 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + YVTLEPC CAAA+ A + + +P G Sbjct: 98 NSAG-----DDAQGATCYVTLEPCSHYGRTPPCAAALVNANVHEVVIAMVDPNPQVAGKG 152 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ +S + F R Sbjct: 153 IAILIAAG----IKVRVGLLSAQSHALNPGFILRMR 184 >gi|260778186|ref|ZP_05887079.1| putative deaminase [Vibrio coralliilyticus ATCC BAA-450] gi|260606199|gb|EEX32484.1| putative deaminase [Vibrio coralliilyticus ATCC BAA-450] Length = 159 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 1/96 (1%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 + IP A V +++ + NR E D TAHAE+ AIR CR L + L + Sbjct: 26 QGGIPFTAYVVNSKGEVLGKGVNRVLENHDPTAHAEVEAIRDACRNTKSSHLRGLTLLAS 85 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 EPC MC A I + Y A + + Sbjct: 86 GEPCAMCYLNALFAGISEVVYVADRDEAARHGFDYR 121 >gi|220931696|ref|YP_002508604.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino)uracil reductase [Halothermothrix orenii H 168] gi|219993006|gb|ACL69609.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino)uracil reductase [Halothermothrix orenii H 168] Length = 371 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 29/151 (19%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-----P-VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55 + +M LE A+ E P VGA+ V +I+ + ++ HAE Sbjct: 7 DTHHSYMQKVLELARK----GEGYTAPNPLVGAIIVREGEIVGQGFHQYYGG----PHAE 58 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109 ILA+ E LYV LEPC C I + ++R+ +P Sbjct: 59 ILALEEAG-----ERARGATLYVNLEPCCHYGKTPPCTKKIIDSGVKRVLAAMFDPNPLV 113 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 G + E+ G+ + + ++ Sbjct: 114 AGKGVKELQENG----IEVEVGLLRKEAERL 140 >gi|145638234|ref|ZP_01793844.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittII] gi|145272563|gb|EDK12470.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittII] gi|309751389|gb|ADO81373.1| Riboflavin biosynthesis protein RibD [Haemophilus influenzae R2866] Length = 372 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 56/156 (35%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + VFM AL+ A P VG V V N +I+ + + HAE +A+ Sbjct: 6 SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 E YVTLEPC CA + A + ++ +P G Sbjct: 62 AQAG-----ENAKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + A E + ++ +I + F K R Sbjct: 117 LKMLSDAG----IESAANLLNDQAEKINKGFLKRMR 148 >gi|320157206|ref|YP_004189585.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio vulnificus MO6-24/O] gi|319932518|gb|ADV87382.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio vulnificus MO6-24/O] Length = 368 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M A+ A+ P VG V + + +I+ + HAE+ A+RM Sbjct: 8 DRQMMLRAIALAKRGLYTTAPNPNVGCVLLRDGEIVGEGFHFRAGE----PHAEVHAMRM 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA + A + R+ +P G Sbjct: 64 AGDKA-----KGATAYVTLEPCSHYGRTPPCAEGLIKAGVSRVVCAMEDPNPQVAGRGFA 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ + + + F K Sbjct: 119 MLREAG----IEVSVGLLQTEAEALNPAFIKR 146 >gi|254281521|ref|ZP_04956489.1| riboflavin biosynthesis protein RibD [gamma proteobacterium NOR51-B] gi|219677724|gb|EED34073.1| riboflavin biosynthesis protein RibD [gamma proteobacterium NOR51-B] Length = 371 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 50/149 (33%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++M+ AL A A VG V V K+I + HAEI A+ Sbjct: 6 DEIYMARALALAGEARFWATPNPHVGCVLVHEGKVIGEGFTQPAGGN----HAEIEALEH 61 Query: 62 GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ A + R+ +P G Sbjct: 62 A-----TADPSGATAYVTLEPCAHTGRTGPCADALIDAGLTRVVVAVGDPYPAVDGRGID 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ ++ ++ F Sbjct: 117 RLRAAG----IEVSVGVLAVQASDLMAGF 141 >gi|332255864|ref|XP_003277047.1| PREDICTED: tRNA-specific adenosine deaminase-like protein 3 [Nomascus leucogenys] Length = 367 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 57/155 (36%), Gaps = 42/155 (27%) Query: 26 VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR--MGCRILSQEILP--------- 72 VGAV V +++++ + HA ++ + + Sbjct: 211 VGAVVVDPASDRVLATGH-DCSSADNPLLHAVMVCVDLVAHGQGRGTYDFRPFPACSFAP 269 Query: 73 ---------------------------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 DLYVT EPC MCA + +RI R++YGAS+P Sbjct: 270 AAALQAVRAGAVRKLDAEEDGLPYVCTGYDLYVTREPCAMCAMGLVHSRILRVFYGASSP 329 Query: 106 KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 G + + + +H +++ G+ E++ R + Sbjct: 330 D-GALGTRFRIHARPDLNHRFQVFRGVLEEQCRWL 363 >gi|332524984|ref|ZP_08401168.1| cmp/dcmp deaminase zinc-binding protein [Rubrivivax benzoatilyticus JA2] gi|332108277|gb|EGJ09501.1| cmp/dcmp deaminase zinc-binding protein [Rubrivivax benzoatilyticus JA2] Length = 161 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 53/155 (34%), Gaps = 18/155 (11%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 ++ A E A A P GAV V + ++ GN HAE + R Sbjct: 11 AWLRRANEVAARALAEGRHPFGAVLVGPDGDTVLLEQGNV-----SAVEHAEAVLAREAA 65 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG------TQFY 117 R + E L L T+EPC MCA A I RL YG + + Sbjct: 66 RRWAPEFLAGCTLVTTVEPCAMCAGTQYWAGIGRLVYGMEERELLALTGAHPENPTLDLP 125 Query: 118 ---TLATCHHSPEIYPGISEQ--RSRQIIQDFFKE 147 A + E+ + + +DF++ Sbjct: 126 CREVFARGQRAIEVIGPVPAAVPEIAALHRDFWQR 160 >gi|229174787|ref|ZP_04302310.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus MM3] gi|228608695|gb|EEK65994.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus MM3] Length = 379 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 57/158 (36%), Gaps = 24/158 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V I+ + + HAE+ A+ Sbjct: 11 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKEGNIVGIGAHLRAGEE----HAEVHALH 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + ++R+ + G Sbjct: 67 MAGEKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKGVKRVVIATLDCNPLVSGTGK 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + A E+ G+ E + + + FF K +R Sbjct: 122 RRLEEAG----IEVATGVLETEATLLNRFFFHYMKTKR 155 >gi|229542331|ref|ZP_04431391.1| riboflavin biosynthesis protein RibD [Bacillus coagulans 36D1] gi|229326751|gb|EEN92426.1| riboflavin biosynthesis protein RibD [Bacillus coagulans 36D1] Length = 370 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 22/153 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+K +M AL A++ A + PVG+V V N I A + K HAE LA Sbjct: 1 MQK-EDYMQLALHLAESVAGQTSPNPPVGSVVVKNGTIAGMAAHLKAGEK----HAERLA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + +++VTLEPC CA + I+ +Y A +P Sbjct: 56 VEQAG-----PLAEGAEVFVTLEPCAHYGKTPPCADFLIEKGIKTVYIAALDPNPLVAGK 110 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A ++ GI ++++ ++ + FF Sbjct: 111 GIEKLRQAG----VKVETGILKEQAEKLYRPFF 139 >gi|27363797|ref|NP_759325.1| riboflavin biosynthesis protein RibD [Vibrio vulnificus CMCP6] gi|27359914|gb|AAO08852.1| riboflavin biosynthesis protein RibD [Vibrio vulnificus CMCP6] Length = 368 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M A+ A+ P VG V + + +I+ + HAE+ A+RM Sbjct: 8 DRQMMLRAIALAKRGLYTTAPNPNVGCVLLRDGEIVGEGFHFRAGE----PHAEVHAMRM 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA + A + R+ +P G Sbjct: 64 AGDKA-----KGATAYVTLEPCSHYGRTPPCAEGLIKAGVSRVVCAMEDPNPQVAGRGFA 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ + + + F K Sbjct: 119 MLREAG----IEVSVGLLQAEAEALNPAFIKR 146 >gi|332094564|gb|EGI99610.1| riboflavin biosynthesis protein RibD [Shigella boydii 5216-82] Length = 367 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|320181604|gb|EFW56519.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-5-phosphoribosylaminouracil reductase [Shigella boydii ATCC 9905] Length = 367 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|193212377|ref|YP_001998330.1| riboflavin biosynthesis protein RibD [Chlorobaculum parvum NCIB 8327] gi|193085854|gb|ACF11130.1| riboflavin biosynthesis protein RibD [Chlorobaculum parvum NCIB 8327] Length = 371 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 59/157 (37%), Gaps = 23/157 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + M LE A+ A + P VG+V V + ++I ++ HAE A Sbjct: 10 EDEGHMRRCLELAERGA--GSVSPNPMVGSVIVHDGRVIGEGWHQKYGG----PHAEPHA 63 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + + +L + LYV LEPC CA I I R+ G +P Sbjct: 64 I---ASVEDEALLRQSTLYVNLEPCSHHGKTPPCADLIVEKCIPRVVVGCLDPHKKVAGK 120 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A E+ G+ E S ++ + F R Sbjct: 121 GIARLREAG----VEVTVGVLEAESERLNEAFMTSHR 153 >gi|299136120|ref|ZP_07029304.1| CMP/dCMP deaminase zinc-binding [Acidobacterium sp. MP5ACTX8] gi|298602244|gb|EFI58398.1| CMP/dCMP deaminase zinc-binding [Acidobacterium sp. MP5ACTX8] Length = 156 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 13/142 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A+EEA+ IP+GA + ++SR NR + D + H E A R R Sbjct: 15 LRVAIEEARAGLAEGGIPIGAAIFRADGSLVSRGHNRRVQQDDPSIHGETDAFRRAGR-- 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 Q+ ++ + TL PC C+ + + + G S GGIE + Sbjct: 73 -QKSYRDLIMVTTLAPCFYCSGLVRQFGFQTVVVGESRTFQGGIEE----LREQGIN--- 124 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 + + +++ + R Sbjct: 125 -VID-LDSAECVEMLTGYISAR 144 >gi|74310983|ref|YP_309402.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Shigella sonnei Ss046] gi|73854460|gb|AAZ87167.1| bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis [Shigella sonnei Ss046] Length = 367 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|193065186|ref|ZP_03046259.1| riboflavin biosynthesis protein RibD [Escherichia coli E22] gi|194428808|ref|ZP_03061343.1| riboflavin biosynthesis protein RibD [Escherichia coli B171] gi|260842612|ref|YP_003220390.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli O103:H2 str. 12009] gi|192927160|gb|EDV81781.1| riboflavin biosynthesis protein RibD [Escherichia coli E22] gi|194413111|gb|EDX29398.1| riboflavin biosynthesis protein RibD [Escherichia coli B171] gi|257757759|dbj|BAI29256.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli O103:H2 str. 12009] gi|323160479|gb|EFZ46427.1| riboflavin biosynthesis protein RibD [Escherichia coli E128010] Length = 367 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|319942892|ref|ZP_08017175.1| riboflavin biosynthesis protein RibD [Lautropia mirabilis ATCC 51599] gi|319743434|gb|EFV95838.1| riboflavin biosynthesis protein RibD [Lautropia mirabilis ATCC 51599] Length = 385 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 57/155 (36%), Gaps = 23/155 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + M A++ A +P VG V V + +++ +R HAE+LA Sbjct: 4 EDDRRAMQRAIDLAWQGVNTT-MPNPRVGCVIVRDGEVVGEGWHRRAGE----PHAEVLA 58 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 ++ E YVTLEPC+ CA + A + R+ +P Sbjct: 59 LQQAG-----ERARGATAYVTLEPCSHHGRTGPCADRLVEAGVARVVAAMEDPNPLVNGQ 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G A ++ G+ E+ +R + + F Sbjct: 114 GLGRLRAAG----IDVRCGLLEEEARALNEGFISR 144 >gi|194432577|ref|ZP_03064863.1| riboflavin biosynthesis protein RibD [Shigella dysenteriae 1012] gi|194419138|gb|EDX35221.1| riboflavin biosynthesis protein RibD [Shigella dysenteriae 1012] gi|332086036|gb|EGI91200.1| riboflavin biosynthesis protein RibD [Shigella dysenteriae 155-74] Length = 367 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|167572878|ref|ZP_02365752.1| riboflavin biosynthesis protein RibD [Burkholderia oklahomensis C6786] Length = 357 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 53/148 (35%), Gaps = 21/148 (14%) Query: 8 MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL A+ R VG V +++ +R HAE+ A+R Sbjct: 1 MAHALRLAEQGLYTTRPNPRVGCVIAHGEQVLGTGWHRRAGE----PHAEVHALREAG-- 54 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E YVTLEPC CA A+ A + R+ A +P G Sbjct: 55 ---ERARGATAYVTLEPCAHYGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAARLAD 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E +R++ FF Sbjct: 112 AG----IVVEQGLMEAEARELNIGFFSR 135 >gi|333010856|gb|EGK30282.1| riboflavin biosynthesis protein RibD [Shigella flexneri K-272] gi|333021355|gb|EGK40608.1| riboflavin biosynthesis protein RibD [Shigella flexneri K-227] Length = 367 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|218698677|ref|YP_002406306.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli IAI39] gi|218368663|emb|CAR16402.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli IAI39] Length = 367 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|24111792|ref|NP_706302.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Shigella flexneri 2a str. 301] gi|30061909|ref|NP_836080.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Shigella flexneri 2a str. 2457T] gi|24050580|gb|AAN42009.1| bifunctional pyrimidine deaminase/reductase [Shigella flexneri 2a str. 301] gi|30040153|gb|AAP15886.1| bifunctional pyrimidine deaminase/reductase [Shigella flexneri 2a str. 2457T] gi|281599746|gb|ADA72730.1| putative Pyrimidine reductase, riboflavin biosynthesis [Shigella flexneri 2002017] gi|313646969|gb|EFS11426.1| riboflavin biosynthesis protein RibD [Shigella flexneri 2a str. 2457T] gi|332761693|gb|EGJ91972.1| riboflavin biosynthesis protein RibD [Shigella flexneri 2747-71] gi|332764291|gb|EGJ94527.1| riboflavin biosynthesis protein RibD [Shigella flexneri K-671] gi|332768519|gb|EGJ98702.1| riboflavin biosynthesis protein RibD [Shigella flexneri 2930-71] gi|333007890|gb|EGK27366.1| riboflavin biosynthesis protein RibD [Shigella flexneri K-218] gi|333022021|gb|EGK41266.1| riboflavin biosynthesis protein RibD [Shigella flexneri K-304] Length = 367 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|145632331|ref|ZP_01788066.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae 3655] gi|144987238|gb|EDJ93768.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae 3655] Length = 372 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + VFM AL+ A P VG V V N +I+ + + HAE +A+ Sbjct: 6 SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 E YVTLEPC CA + A + ++ +P G Sbjct: 62 AQAG-----ENSKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + A + + ++ +I + F K R Sbjct: 117 LKMLSDAGIESAVN----LLNDQAEKINKGFLKRMR 148 >gi|148826406|ref|YP_001291159.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittEE] gi|229846003|ref|ZP_04466115.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 7P49H1] gi|148716566|gb|ABQ98776.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittEE] gi|229811007|gb|EEP46724.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 7P49H1] gi|309973554|gb|ADO96755.1| Riboflavin biosynthesis protein RibD [Haemophilus influenzae R2846] Length = 372 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + VFM AL+ A P VG V V N +I+ + + HAE +A+ Sbjct: 6 SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 E YVTLEPC CA + A + ++ +P G Sbjct: 62 AQAG-----ENSKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + A + + ++ +I + F K R Sbjct: 117 LKMLSDAGIESAVN----LLNDQAEKINKGFLKRMR 148 >gi|260581778|ref|ZP_05849575.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae NT127] gi|260095371|gb|EEW79262.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae NT127] Length = 372 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + VFM AL+ A P VG V V N +I+ + + HAE +A+ Sbjct: 6 SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 E YVTLEPC CA + A + ++ +P G Sbjct: 62 AQAG-----ENSKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + A + + ++ +I + F K R Sbjct: 117 LKMLSDAGIESAVN----LLSDQAEKINKGFLKRMR 148 >gi|300918206|ref|ZP_07134813.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 115-1] gi|300414657|gb|EFJ97967.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 115-1] Length = 367 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|114765713|ref|ZP_01444811.1| putative deaminase [Pelagibaca bermudensis HTCC2601] gi|114541930|gb|EAU44965.1| putative deaminase [Roseovarius sp. HTCC2601] Length = 152 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 6/131 (4%) Query: 10 CALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 A A+ E PV A + +++++ + N E D + HAEI+AI R L Sbjct: 15 IAAALAR--FSPGEGPVFTAAVLRGDEVLALSANEVSERCDASRHAEIVAIETASRKLGS 72 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN---PKGGGIENGTQFYTLATCHHS 125 L L +++PC MC AA+ A I RL + + P N T C H+ Sbjct: 73 TKLDGCTLIASMQPCEMCLAAMRWAGIDRLVFAMTQELAPTFFQFPNLTIADYARACDHA 132 Query: 126 PEIYPGISEQR 136 + + G+ +R Sbjct: 133 FDWHGGLGAER 143 >gi|301049614|ref|ZP_07196565.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 185-1] gi|300298607|gb|EFJ54992.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 185-1] Length = 367 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|26246419|ref|NP_752458.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli CFT073] gi|191173514|ref|ZP_03035041.1| riboflavin biosynthesis protein RibD [Escherichia coli F11] gi|218688277|ref|YP_002396489.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli ED1a] gi|227884578|ref|ZP_04002383.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli 83972] gi|300988034|ref|ZP_07178514.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 45-1] gi|300997399|ref|ZP_07181739.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 200-1] gi|331645587|ref|ZP_08346691.1| riboflavin biosynthesis protein RibD [Escherichia coli M605] gi|26106817|gb|AAN79002.1|AE016756_185 Riboflavin biosynthesis protein ribD [Escherichia coli CFT073] gi|190906223|gb|EDV65835.1| riboflavin biosynthesis protein RibD [Escherichia coli F11] gi|218425841|emb|CAR06647.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli ED1a] gi|222032209|emb|CAP74948.1| riboflavin biosynthesis protein ribD [Escherichia coli LF82] gi|227838664|gb|EEJ49130.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli 83972] gi|281177584|dbj|BAI53914.1| pyrimidine deaminase/reductase [Escherichia coli SE15] gi|300304218|gb|EFJ58738.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 200-1] gi|300407586|gb|EFJ91124.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 45-1] gi|312944991|gb|ADR25818.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli O83:H1 str. NRG 857C] gi|315294207|gb|EFU53558.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 153-1] gi|324010091|gb|EGB79310.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 57-2] gi|324010674|gb|EGB79893.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 60-1] gi|330910208|gb|EGH38718.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Escherichia coli AA86] gi|331045749|gb|EGI17875.1| riboflavin biosynthesis protein RibD [Escherichia coli M605] Length = 367 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|320197148|gb|EFW71765.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-5-phosphoribosylaminouracil reductase [Escherichia coli WV_060327] Length = 367 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|26522770|dbj|BAC44857.1| pyrimidine deaminase/ pyrimidine reductase [Vibrio fischeri] Length = 372 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 53/151 (35%), Gaps = 21/151 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + ++ M A+ A+ P VG V V + KI+ + HAE+ A+ Sbjct: 5 TQDHLMMQKAILLAKQGIYTTAPNPNVGCVLVKDGKIVGEGAHLKAGE----PHAEVHAL 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + YVTLEPC CA + A ++++ +P G Sbjct: 61 RQAGKEAQ-----GATAYVTLEPCSHYGRTPPCAEGLIKAGVKKVICAMVDPNPQVAGRG 115 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E G+ E +R + F Sbjct: 116 LAMLNEAG----IETASGLLEADARALNPHF 142 >gi|322381771|ref|ZP_08055725.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase-like protein/5-amino-6-(5-phosphoribosylamino) uracil reductase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154159|gb|EFX46481.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase-like protein/5-amino-6-(5-phosphoribosylamino) uracil reductase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 362 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 21/139 (15%) Query: 14 EAQNAALRNEI-PV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71 A+ A + + PV G V V + +II + +R HAE+ A++M Sbjct: 1 MAKGAKGQTGVNPVVGCVLVKDGRIIGMGAHLHRGQG----HAEVHALQMAGAEA----- 51 Query: 72 PEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 YVTLEPC C+ + ++R+ A +P G + A Sbjct: 52 EGSTAYVTLEPCSHFGKTPPCSGRLIDHGVKRVVIAAVDPNPQVAGAGIERLRSAG---- 107 Query: 126 PEIYPGISEQRSRQIIQDF 144 E+ G+ + + + + F Sbjct: 108 IEVDVGLLAEEASAMNEAF 126 >gi|90579822|ref|ZP_01235630.1| Putative pyrimidine deaminase/pyrimidine reductase [Vibrio angustum S14] gi|90438707|gb|EAS63890.1| Putative pyrimidine deaminase/pyrimidine reductase [Vibrio angustum S14] Length = 374 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M A++ A+ P VG V ++I+ + HAE+ A++ Sbjct: 6 DTRLMLRAIQLAKRGCFTTAPNPNVGCVIANGDEILGEGFHYRAGE----PHAEVFALKQ 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ + + R+ +P G + Sbjct: 62 AG-----VRAKGATAYVTLEPCSHYGRTPPCAEALIKSGVSRVICAMVDPNPLVAGRGVE 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A ++ G+ ++ ++ I + F K+ Sbjct: 117 MLQKAG----VDVQVGLLKEEAQAINKAFIKQ 144 >gi|82775681|ref|YP_402028.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Shigella dysenteriae Sd197] gi|309787001|ref|ZP_07681613.1| riboflavin biosynthesis protein RibD [Shigella dysenteriae 1617] gi|81239829|gb|ABB60539.1| bifunctional pyrimidine deaminase/reductase [Shigella dysenteriae Sd197] gi|308924579|gb|EFP70074.1| riboflavin biosynthesis protein RibD [Shigella dysenteriae 1617] Length = 367 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|125972628|ref|YP_001036538.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Clostridium thermocellum ATCC 27405] gi|125712853|gb|ABN51345.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Clostridium thermocellum ATCC 27405] Length = 365 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 53/130 (40%), Gaps = 17/130 (13%) Query: 1 MKKGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + FMS A++ A+ N P VGAV V + KII+ ++ +L HAE+ A Sbjct: 1 MSEKEFFMSRAIKLAKLGWGKTNPNPLVGAVVVKDGKIIAEGYHK--QLGGP--HAEVEA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +E + LYV LEPC CA I I+++ +P Sbjct: 57 FNNA-----KEDVAGGTLYVNLEPCSHYGRTPPCAQKIIDVGIKKVVAAIKDPNPKVSGR 111 Query: 113 GTQFYTLATC 122 G + A Sbjct: 112 GFEMLKNAGI 121 >gi|45659288|ref|YP_003374.1| cytidine deaminase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45602534|gb|AAS72011.1| cytidine deaminase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 201 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 2/129 (1%) Query: 21 RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 R EIP K+IS N + D + H+EIL IR L L + L +L Sbjct: 71 REEIPSFTRIYHKEKLISETFNEVEKKSDSSFHSEILCIRNAKEKLKTRYLADCMLITSL 130 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 EPC MCA I L+RI ++ Y +G GI + + + + PE++ I + S+ Sbjct: 131 EPCLMCAGTILLSRIPKVVYLLPAKQGEGISS-LSIEMIYSRNFFPELFC-IPTEISKNA 188 Query: 141 IQDFFKERR 149 + FFK RR Sbjct: 189 FKSFFKVRR 197 >gi|145640611|ref|ZP_01796194.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae R3021] gi|145274537|gb|EDK14400.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae 22.4-21] Length = 250 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + VFM AL+ A P VG V V N +I+ + + HAE +A+ Sbjct: 6 SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 E YVTLEPC CA + A + ++ +P G Sbjct: 62 AQAG-----ENSKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + A + + ++ +I + F K R Sbjct: 117 LKMLSDAGIESAVN----LLNDQAEKINKGFLKRMR 148 >gi|293413668|ref|ZP_06656317.1| riboflavin biosynthesis protein RibD [Escherichia coli B185] gi|291433726|gb|EFF06699.1| riboflavin biosynthesis protein RibD [Escherichia coli B185] Length = 367 Score = 98.1 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|149001717|ref|ZP_01826690.1| Holliday junction DNA helicase motor protein [Streptococcus pneumoniae SP14-BS69] gi|147760175|gb|EDK67164.1| Holliday junction DNA helicase motor protein [Streptococcus pneumoniae SP14-BS69] Length = 341 Score = 98.1 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 48/125 (38%), Gaps = 19/125 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VGAV V +N II + + HAE A++ CR LYVTLEPC Sbjct: 2 VGAVIVKDNHIIGQGYHEFFGG----PHAERNALKN-CRESP----VGATLYVTLEPCCH 52 Query: 84 ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C AI + I R+ G+ + G + ++ GI E Sbjct: 53 FGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGVKILEENNL----QVTVGILENECLN 108 Query: 140 IIQDF 144 +I+ F Sbjct: 109 LIKSF 113 >gi|282863790|ref|ZP_06272848.1| CMP/dCMP deaminase zinc-binding [Streptomyces sp. ACTE] gi|282561491|gb|EFB67035.1| CMP/dCMP deaminase zinc-binding [Streptomyces sp. ACTE] Length = 142 Score = 98.1 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 1/102 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + A+ A A + P G++ + +++ N D+TAH E+ R Sbjct: 5 DDHTLLRRAIALAAEAREGGDPPFGSLLSGPDGTVLAEERNTTLTDGDITAHPELKLARW 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 R L E +Y + +PC MC A I A +RR+ + S Sbjct: 65 AARELDAATAAETTMYTSCQPCEMCQAVIQRAGLRRVVFALS 106 >gi|317154507|ref|YP_004122555.1| riboflavin biosynthesis protein RibD [Desulfovibrio aespoeensis Aspo-2] gi|316944758|gb|ADU63809.1| riboflavin biosynthesis protein RibD [Desulfovibrio aespoeensis Aspo-2] Length = 377 Score = 98.1 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 23/147 (15%) Query: 8 MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M+ A+E A+ R + P VGAV V ++I++ + HAE + Sbjct: 14 MARAIELARLG--RGAVAPNPCVGAVLVDGDRIVAEGWHMRYGGL----HAERECLVDAR 67 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + ++VTLEPC C A+ + R+ G +P + Sbjct: 68 SKGVTPR--GLTMFVTLEPCNHHGKTPPCTQALIEEGVARVVVGTRDPNPVAAGGIERLT 125 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 E+ G E R +I DF Sbjct: 126 AA-----GIEVEVGALESECRDLIADF 147 >gi|261211387|ref|ZP_05925675.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio sp. RC341] gi|260839342|gb|EEX65968.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio sp. RC341] Length = 367 Score = 98.1 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 64 AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIQAGVAKVICAMQDPNPQVAGRGVQ 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + + F K Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146 >gi|94264512|ref|ZP_01288299.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase-like [delta proteobacterium MLMS-1] gi|93455071|gb|EAT05298.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase-like [delta proteobacterium MLMS-1] Length = 374 Score = 98.1 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 57/152 (37%), Gaps = 22/152 (14%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL EA+ P VGAV V N +++ + +R HA Sbjct: 5 DLTYMRLALAEARKGVGKTAPNPCVGAVVVKNGRVVGKGWHRKIGQ----PHA-----EA 55 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + E +YVTLEPC C+ AI A IRR+ YG ++P + Sbjct: 56 EALRAAGEAAAGATIYVTLEPCNHLGRTPPCSEAIIAAGIRRVVYGLADPHEVARGGAKR 115 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + E+ G+ R++ F K Sbjct: 116 LESA-----GLEVLGGVLADECRRLNLPFIKR 142 >gi|254361993|ref|ZP_04978124.1| bifunctional 5-amino-6-(5-phosphoribosylamino)uracil reductase/ diaminohydroxyphosphoribosylaminopyrimidine deaminase [Mannheimia haemolytica PHL213] gi|153093540|gb|EDN74520.1| bifunctional 5-amino-6-(5-phosphoribosylamino)uracil reductase/ diaminohydroxyphosphoribosylaminopyrimidine deaminase [Mannheimia haemolytica PHL213] Length = 359 Score = 98.1 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 56/148 (37%), Gaps = 25/148 (16%) Query: 8 MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M+ A+ A+ A R P VG V V N II+ ++ K + HAE AI Sbjct: 1 MAYAITLAEKA--RGWTSPNPLVGCVIVKNGNIIAEGYHQ----KAGSWHAERNAI---- 50 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + +E L YVTLEPC C+ + I++++ G+ +P G Sbjct: 51 -LNCEEDLTGATAYVTLEPCCHHGRTPPCSELLIERGIKKVFIGSRDPNPLVSGKGAAQL 109 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ + FF Sbjct: 110 RAAG----IEVVEDFMRTECDALNPIFF 133 >gi|225023912|ref|ZP_03713104.1| hypothetical protein EIKCOROL_00778 [Eikenella corrodens ATCC 23834] gi|224943386|gb|EEG24595.1| hypothetical protein EIKCOROL_00778 [Eikenella corrodens ATCC 23834] Length = 364 Score = 98.1 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 55/149 (36%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M A+ A + P VG V +I+ + + HAE+ A+R Sbjct: 8 DHALMQQAIALAWQGRFSTSPNPRVGCVIAQGGQIVGQGFHLKAGE----PHAEVHALRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ A +RR+ +P + G Sbjct: 64 AGSAAQ-----GATAYVTLEPCAHHGRTPPCAEALIRAGVRRVVAAMQDPNPLVVGKGLA 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ E+ +RQ+ + F Sbjct: 119 ILEAAG----IQVACGLMEREARQLNRGF 143 >gi|156030997|ref|XP_001584824.1| hypothetical protein SS1G_14279 [Sclerotinia sclerotiorum 1980] gi|154700670|gb|EDO00409.1| hypothetical protein SS1G_14279 [Sclerotinia sclerotiorum 1980 UF-70] Length = 152 Score = 98.1 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 18/140 (12%) Query: 10 CALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 A+EEA+ +P+GA V K++ R N + H E A+ R+ + Sbjct: 12 IAVEEAKIGYEEGGVPIGAALVSREGKLLGRGHNMRVQKGSAIHHGETSALENSGRLPAS 71 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 +Y T A L I R+ G +N GG Q E+ Sbjct: 72 AY-KGSTMYTT-------TGACLLYGISRVVVGENNTFLGGEAYLKQ--------RGIEV 115 Query: 129 YPGISEQRSRQIIQDFFKER 148 + + +++++ F E+ Sbjct: 116 V-NMQSKECQELMERFISEK 134 >gi|15800143|ref|NP_286155.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli O157:H7 EDL933] gi|15829721|ref|NP_308494.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli O157:H7 str. Sakai] gi|168749873|ref|ZP_02774895.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC4113] gi|168756953|ref|ZP_02781960.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC4401] gi|168761617|ref|ZP_02786624.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC4501] gi|168768362|ref|ZP_02793369.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC4486] gi|168776283|ref|ZP_02801290.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC4196] gi|168783277|ref|ZP_02808284.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC4076] gi|168786258|ref|ZP_02811265.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC869] gi|168800294|ref|ZP_02825301.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC508] gi|195938521|ref|ZP_03083903.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli O157:H7 str. EC4024] gi|208806179|ref|ZP_03248516.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC4206] gi|208815640|ref|ZP_03256819.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC4045] gi|208822832|ref|ZP_03263150.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC4042] gi|209395713|ref|YP_002269058.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC4115] gi|217325532|ref|ZP_03441616.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. TW14588] gi|254791597|ref|YP_003076434.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli O157:H7 str. TW14359] gi|261223893|ref|ZP_05938174.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase [Escherichia coli O157:H7 str. FRIK2000] gi|261256393|ref|ZP_05948926.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase [Escherichia coli O157:H7 str. FRIK966] gi|291281320|ref|YP_003498138.1| Bifunctional deaminase-reductase, C-terminal:Riboflavin biosynthesis protein RibD [Escherichia coli O55:H7 str. CB9615] gi|12513266|gb|AAG54763.1|AE005220_12 bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis [Escherichia coli O157:H7 str. EDL933] gi|13359924|dbj|BAB33890.1| bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis [Escherichia coli O157:H7 str. Sakai] gi|187768260|gb|EDU32104.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC4196] gi|188015886|gb|EDU54008.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC4113] gi|188999379|gb|EDU68365.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC4076] gi|189355992|gb|EDU74411.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC4401] gi|189362505|gb|EDU80924.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC4486] gi|189368039|gb|EDU86455.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC4501] gi|189373620|gb|EDU92036.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC869] gi|189377412|gb|EDU95828.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC508] gi|208725980|gb|EDZ75581.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC4206] gi|208732288|gb|EDZ80976.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC4045] gi|208737025|gb|EDZ84709.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC4042] gi|209157113|gb|ACI34546.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. EC4115] gi|209744084|gb|ACI70349.1| bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis [Escherichia coli] gi|209744086|gb|ACI70350.1| bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis [Escherichia coli] gi|209744088|gb|ACI70351.1| bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis [Escherichia coli] gi|209744090|gb|ACI70352.1| bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis [Escherichia coli] gi|209744092|gb|ACI70353.1| bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis [Escherichia coli] gi|217321753|gb|EEC30177.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. TW14588] gi|254590997|gb|ACT70358.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase [Escherichia coli O157:H7 str. TW14359] gi|290761193|gb|ADD55154.1| Bifunctional deaminase-reductase, C-terminal:Riboflavin biosynthesis protein RibD [Escherichia coli O55:H7 str. CB9615] gi|320192827|gb|EFW67467.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-5-phosphoribosylaminouracil reductase [Escherichia coli O157:H7 str. EC1212] gi|320638406|gb|EFX08120.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli O157:H7 str. G5101] gi|320643786|gb|EFX12909.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli O157:H- str. 493-89] gi|320649137|gb|EFX17715.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli O157:H- str. H 2687] gi|326341175|gb|EGD64967.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str. 1044] gi|326346050|gb|EGD69789.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-5-phosphoribosylaminouracil reductase [Escherichia coli O157:H7 str. 1125] Length = 367 Score = 98.1 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|331671959|ref|ZP_08372755.1| riboflavin biosynthesis protein RibD [Escherichia coli TA280] gi|331070948|gb|EGI42307.1| riboflavin biosynthesis protein RibD [Escherichia coli TA280] Length = 367 Score = 98.1 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|258645658|ref|ZP_05733127.1| riboflavin biosynthesis protein RibD [Dialister invisus DSM 15470] gi|260403024|gb|EEW96571.1| riboflavin biosynthesis protein RibD [Dialister invisus DSM 15470] Length = 434 Score = 98.1 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 40/154 (25%), Positives = 57/154 (37%), Gaps = 21/154 (13%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + FM+ ALE A N R VGAV V + +II + HAE+ A Sbjct: 3 IDDDKKFMARALELAANGMGHTRPNPMVGAVLVKDGEIIGEGWHEFYGG----PHAEVNA 58 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 CR LYVTLEPC CA I + R+ +P Sbjct: 59 F-ADCRADP----AGATLYVTLEPCCHYGKTPPCADLIVSKNLERVVVAMQDPNPLVSGK 113 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A + G+ E+ ++ + + F K Sbjct: 114 GIRKLKDAGIF----VTTGVMEKEAQVLNEVFMK 143 >gi|148255996|ref|YP_001240581.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bradyrhizobium sp. BTAi1] gi|146408169|gb|ABQ36675.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Bradyrhizobium sp. BTAi1] Length = 383 Score = 98.1 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 53/154 (34%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL + R VGAV V + I+ R + HAE A+R Sbjct: 21 DRRFMQLALALGRRGQGRTWPNPAVGAVVVKDGVIVGRGWTQPGGR----PHAEPEALRR 76 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 LYV+LEPC CA A+ A I R+ +P G Sbjct: 77 AGAAT-----KGATLYVSLEPCSHFGKSPPCADAVIAAGISRVVSAIEDPNPEVSGQGHA 131 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ +++ FF+ R Sbjct: 132 RLRAAG----IQVEVGLCSADAKRDHAGFFRRIR 161 >gi|145219912|ref|YP_001130621.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Prosthecochloris vibrioformis DSM 265] gi|145206076|gb|ABP37119.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Chlorobium phaeovibrioides DSM 265] Length = 357 Score = 98.1 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 19/145 (13%) Query: 8 MSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M LE A+ A + P VG+V V + +++ + HAE+ AI + Sbjct: 1 MVRCLELARQGAGAVSPNPMVGSVIVCDGEVVGEGYH--EAFGGP--HAEVNAI---ASV 53 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +L LYV LEPC CA I IRR+ G +P G Sbjct: 54 GDGAVLRRSTLYVNLEPCSHHGKTPPCADLIIEKGIRRVVIGCGDPNPQVAGRGVAKLRS 113 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E S+++ + F Sbjct: 114 AG----VEVLEGVLEAESKRLNEAF 134 >gi|85712650|ref|ZP_01043696.1| Riboflavin-specific deaminase/reductase [Idiomarina baltica OS145] gi|85693500|gb|EAQ31452.1| Riboflavin-specific deaminase/reductase [Idiomarina baltica OS145] Length = 373 Score = 98.1 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 54/151 (35%), Gaps = 21/151 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 K +++M ALE A+ P VG V V + I+ ++ HAE+ A+ Sbjct: 8 KHDHLYMHRALELARKGRFTTGPNPAVGCVIVKDASIVGEGWHQKAGE----PHAEVFAL 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R YVTLEPC C A+ A + R+ +P G Sbjct: 64 RQAGTQA-----KHATAYVTLEPCSHQGRTPPCVDALINAEVARVVIAMQDPNPVVSGRG 118 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E +R + F Sbjct: 119 IHKLHDAD----IEVRVGLFETAARALNPGF 145 >gi|251777591|ref|ZP_04820511.1| riboflavin biosynthesis protein RibD [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243081906|gb|EES47796.1| riboflavin biosynthesis protein RibD [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 363 Score = 98.1 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 25/153 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M ALE A+ ++ P VGA+ V +N+II + +HAE+ AI Sbjct: 2 NEKYMELALELAKKG--EGKVNPNPLVGALIVKDNEIIGAGYHEKYGE----SHAEVNAI 55 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + L +YVTLEPC C I +I+++ G +P Sbjct: 56 NNA-----TKSLDGSTIYVTLEPCSHYGKTPPCVDLIIEKKIKKVIIGMLDPNPMVSGKS 110 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + E+ G+ E++ ++I + F K Sbjct: 111 IKKLKDND----IEVIVGVEEEKCKKINESFIK 139 >gi|90415720|ref|ZP_01223654.1| riboflavin biosynthesis protein [marine gamma proteobacterium HTCC2207] gi|90333043|gb|EAS48213.1| riboflavin biosynthesis protein [marine gamma proteobacterium HTCC2207] Length = 373 Score = 98.1 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 54/154 (35%), Gaps = 22/154 (14%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +MS ALE A VG V V++ I+ R HAE+ A+ Sbjct: 6 DDREYMSRALELAAKGRFTTSPNPSVGCVLVVDGAIVGEGHTRPAGGN----HAEVEALN 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC+ C + A I R+ +P G Sbjct: 62 AAASAKGATA------YVTLEPCSHSGKTGPCVEVLIDAGISRVVIACEDPNPKVAGEGI 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + A E+ G+ E ++R++ + F K Sbjct: 116 KLLQDAG----IEVACGLYEDQARELNKGFIKRH 145 >gi|225350924|ref|ZP_03741947.1| hypothetical protein BIFPSEUDO_02499 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158380|gb|EEG71622.1| hypothetical protein BIFPSEUDO_02499 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 191 Score = 98.1 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 53/153 (34%), Gaps = 18/153 (11%) Query: 1 MKKGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + +M+ ALE A A N P VG V V + +I++ + HAE +A Sbjct: 36 MPQYRKYMTQALELAHKGAGWVNPNPLVGTVVVRDGEILAAGYHDRYRG----PHAERMA 91 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + + TLEPC C I I R+ G+ +P Sbjct: 92 FDYADEHGA--DMHGATVIDTLEPCCHVGSQPACTDLILSHGITRVVVGSIDPNPIVAGK 149 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + E+ + I + FF Sbjct: 150 GLRILEENG----VEVVYDVMRAECDAINRHFF 178 >gi|223994185|ref|XP_002286776.1| hypothetical protein THAPSDRAFT_260925 [Thalassiosira pseudonana CCMP1335] gi|220978091|gb|EED96417.1| hypothetical protein THAPSDRAFT_260925 [Thalassiosira pseudonana CCMP1335] Length = 183 Score = 98.1 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 56/159 (35%), Gaps = 16/159 (10%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAV--LNNK----IISRAGNRNRELKDVTAHA 54 MS A+ + P GA +K + S NR L + T H Sbjct: 21 TTDEEMMSLAVHLSDRNITEGTGGPFGAAIFERHPDKGYCTLTSIGMNRVVPLGNSTLHG 80 Query: 55 EILAIRMGCRILSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 E +AI++ R + L +L+ + EPC MC A + + R+ GA+ Sbjct: 81 ETVAIQLAQRKVGSFTLMLDGKRRFELFTSCEPCCMCLGATLWSGVSRIVCGATKDDAQA 140 Query: 110 IENGTQFYTLATCHH----SPEIYPGISEQRSRQIIQDF 144 I + H E+ + + + +++ + Sbjct: 141 IGFDEGPVFEESYKHLEKAGVEVTRNVLREEAAKVLTRY 179 >gi|153836433|ref|ZP_01989100.1| diaminohydroxyphosphoribosylamino-pyrimidine deaminase [Vibrio parahaemolyticus AQ3810] gi|260901767|ref|ZP_05910162.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus AQ4037] gi|149750335|gb|EDM61080.1| diaminohydroxyphosphoribosylamino-pyrimidine deaminase [Vibrio parahaemolyticus AQ3810] gi|308108841|gb|EFO46381.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus AQ4037] Length = 141 Score = 98.1 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 21/144 (14%) Query: 7 FMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM ALE ++NA + PVG V V +N+I+S + HAE+ A+ Sbjct: 5 FMRRALEVSKNALPECQPNPPVGCVLVKDNQIVSEGHTQAIGGN----HAEVEALNA--- 57 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 Q L V YVTLEPC CA + + I ++ +P G + Sbjct: 58 --YQGSLESVTAYVTLEPCSFVGRTPACAVTLVKSGIGKVVVAMLDPDPRNSGRGIEILK 115 Query: 119 LATCHHSPEIYPGISEQRSRQIIQ 142 A E+ G+ + + + Sbjct: 116 QAG----IEVEIGLCGKEVSEFLT 135 >gi|118595047|ref|ZP_01552394.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase, C-terminal [Methylophilales bacterium HTCC2181] gi|118440825|gb|EAV47452.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase, C-terminal [Methylophilales bacterium HTCC2181] Length = 363 Score = 98.1 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 59/152 (38%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAALRNEI-PV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM+ A+ A+ + + PV GA+AV ++ +I + KD HAE+LA++ Sbjct: 6 HTEFMALAISLAKQGLGKTQPNPVVGAIAVKDSVVIGSGFHAK-AGKD---HAEVLALKE 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 LY+TLEPC C I + + ++ +S+P G Sbjct: 62 AGAGA-----KGSTLYITLEPCGHVGKTPPCVDLILSSGVTKVVVASSDPNPLVNGKGLA 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 H E+ + ++ + FF Sbjct: 117 VLRS----HGIEVVEDVLRLQAEALNTGFFSR 144 >gi|224456420|ref|ZP_03664893.1| zinc-binding domain-containing protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254874186|ref|ZP_05246896.1| zinc-binding domain-containing protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254840185|gb|EET18621.1| zinc-binding domain-containing protein [Francisella tularensis subsp. tularensis MA00-2987] Length = 72 Score = 98.1 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 36/67 (53%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A ++A A E+P+GAV V +++II + N+ L D TAHAEIL +R Sbjct: 6 DQDIFFMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLRS 65 Query: 62 GCRILSQ 68 L Sbjct: 66 AALKLGN 72 >gi|89093485|ref|ZP_01166433.1| riboflavin biosynthesis protein RibD [Oceanospirillum sp. MED92] gi|89082175|gb|EAR61399.1| riboflavin biosynthesis protein RibD [Oceanospirillum sp. MED92] Length = 379 Score = 98.1 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 52/152 (34%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M+ A+ A+ N P VG V V + I+ + HAE+ A+ Sbjct: 9 DHRYMARAIVLAKQGLYTTNPNPRVGCVLVKDEVIVGEGFHFRAGEG----HAEVNAMAQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + R+ +P G Q Sbjct: 65 AGDLA-----KGATAYVTLEPCSHYGRTPPCAEGLIKAGVNRVVCAMVDPNPQVAGRGIQ 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A G+ E +R + F K Sbjct: 120 MLESAG----ISAESGLLEAEARALNPGFIKR 147 >gi|239816932|ref|YP_002945842.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110] gi|239803509|gb|ACS20576.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110] Length = 158 Score = 97.7 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 38/163 (23%), Positives = 57/163 (34%), Gaps = 20/163 (12%) Query: 1 MKKGNVF--MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEI 56 M + + + A E A+ A P GAV V + I++ GN D HAE Sbjct: 1 MTRDQIIRALRRADEVARRAMAMGRHPFGAVLVAPDGETILAEQGN-----IDTVNHAEA 55 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----- 111 R + + L + L T EPC MCA A I R+ YGA + Sbjct: 56 TLARHAAQNWPADYLWQCTLVTTFEPCAMCAGTSYWAHIGRIVYGAEESALLALTGDHPE 115 Query: 112 ----NGTQFYTLATCHHSPEIYPGISE--QRSRQIIQDFFKER 148 + A E+ + E + + F++ R Sbjct: 116 NPTLSLPCREVFARGQKKIEVIGPVPEVAEEMIATHRGFWEAR 158 >gi|296160058|ref|ZP_06842878.1| riboflavin biosynthesis protein RibD [Burkholderia sp. Ch1-1] gi|295889804|gb|EFG69602.1| riboflavin biosynthesis protein RibD [Burkholderia sp. Ch1-1] Length = 391 Score = 97.7 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 52/151 (34%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + V M AL A+ + P VG V V N ++I + HAEI A+ Sbjct: 4 QTDFVHMERALALARRGMYTTDPNPRVGCVLVKNGEVIGEGFTQPAGQD----HAEIRAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + L YVTLEPC C A+ A++ + +P G Sbjct: 60 KDA--RSRGHDLRGATAYVTLEPCSHFGRTPPCVNALIEAQVALVVAAMEDPNPLVSGRG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ + ++ F Sbjct: 118 LAILRDAG----IEVRCGLLANEAHELNIGF 144 >gi|134098685|ref|YP_001104346.1| cytosine deaminase [Saccharopolyspora erythraea NRRL 2338] gi|291003628|ref|ZP_06561601.1| cytosine deaminase [Saccharopolyspora erythraea NRRL 2338] gi|133911308|emb|CAM01421.1| cytosine deaminase [Saccharopolyspora erythraea NRRL 2338] Length = 156 Score = 97.7 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 49/126 (38%), Gaps = 15/126 (11%) Query: 24 IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 IP+GA V + +++ R NR + D + H E A R R S + TL P Sbjct: 30 IPIGAALVGRDGEVLGRGHNRRVQDGDPSVHGETSAFRAAGRQRS---YAGTTMVTTLSP 86 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR-SRQII 141 C C+ + I R+ G + GG + + H E+ + + +++ Sbjct: 87 CWYCSGLVRQFGISRVVIGEARNFHGGHDWLAE--------HGVEVV--LLDDPGCVEMM 136 Query: 142 QDFFKE 147 DF Sbjct: 137 ADFIAA 142 >gi|162147221|ref|YP_001601682.1| cytidine deaminase [Gluconacetobacter diazotrophicus PAl 5] gi|209544272|ref|YP_002276501.1| CMP/dCMP deaminase [Gluconacetobacter diazotrophicus PAl 5] gi|161785798|emb|CAP55369.1| putative cytidine deaminase [Gluconacetobacter diazotrophicus PAl 5] gi|209531949|gb|ACI51886.1| CMP/dCMP deaminase zinc-binding [Gluconacetobacter diazotrophicus PAl 5] Length = 168 Score = 97.7 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 57/147 (38%), Gaps = 11/147 (7%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRE-LKDVTAHAEILAIR 60 + A+ + +A + P A+ +++S A N + D T HAE+ A+ Sbjct: 8 TDLDLLRRAIALSADARAQGRHPFAALVADAQGRVVSTAINNSMPPEGDPTQHAELRAVA 67 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGGIENGTQF 116 RIL + + + LY + EPC MCA A+ IRR+ Y S + G F Sbjct: 68 GAARILPPDAMADCTLYTSAEPCCMCAGAVYWTNIRRVVYALSEHRLLALTGAHPENPTF 127 Query: 117 Y-----TLATCHHSPEIYPGISEQRSR 138 A H + + E + Sbjct: 128 ALPCREVFARGQHPVAVLGPMLEDEAA 154 >gi|194705936|gb|ACF87052.1| unknown [Zea mays] Length = 138 Score = 97.7 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 21/116 (18%) Query: 53 HAEILAIRMGCRILSQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 HAE+ AI + R E DLYVT EPC MCA A+S+ IR +Y+G + Sbjct: 6 HAEMEAIDVLLREWQSMGLDQPQVAEKFAGCDLYVTCEPCIMCATALSIIGIREVYFGCA 65 Query: 104 NPKGGGIENGTQFYT------------LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 N K GG + + A+ + GI + + + + F+++ Sbjct: 66 NDKFGGCGSIMSLHNGAASSSDELSGSQASTPKGFKCTGGIMAEEAVALFRCFYEQ 121 >gi|23098113|ref|NP_691579.1| hypothetical protein OB0658 [Oceanobacillus iheyensis HTE831] gi|22776338|dbj|BAC12614.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 158 Score = 97.7 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 61/156 (39%), Gaps = 11/156 (7%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +E A+ A + P G+V V N +++ N D T H E + Sbjct: 4 DSDLKYLRRCIELAKAALETGDEPFGSVLVSANGDVLAEDYNHV-SGGDHTQHPEFALAK 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG-------GGIENG 113 ++ E + +Y + E C MCAAA + R+ Y +S+ + G E+ Sbjct: 63 WAAGNMTSEERGKATVYTSGEHCPMCAAAHGWVGLGRIVYASSSEQLVQWLNEIGVTESR 122 Query: 114 TQFYTLATCHHSPEIYPGI--SEQRSRQIIQDFFKE 147 + + I + ++ RQ+ + F+ + Sbjct: 123 VRNLPIQDVIRDTTIEGPVPALAEQVRQLHRQFYAK 158 >gi|298249165|ref|ZP_06972969.1| riboflavin biosynthesis protein RibD [Ktedonobacter racemifer DSM 44963] gi|297547169|gb|EFH81036.1| riboflavin biosynthesis protein RibD [Ktedonobacter racemifer DSM 44963] Length = 383 Score = 97.7 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 44/155 (28%), Positives = 59/155 (38%), Gaps = 30/155 (19%) Query: 3 KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-----HAE 55 FM A+ A+ PVGAV V N++I R T+ HAE Sbjct: 2 SHLEFMQKAIACARSIEGRTSPRPPVGAVLVRENQVIGRG---------ATSPPYGPHAE 52 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109 I A+R DLY TLEPC C AAI A I+R+ G+ +P Sbjct: 53 IHALREA----ETTAAVGADLYTTLEPCCITVHTPPCTAAIIAAGIKRVIIGSLDPNPQV 108 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A E+ I+E + +I+ F Sbjct: 109 SGRGVAQLREAG----IEVITTIAEPETAALIRPF 139 >gi|114777284|ref|ZP_01452295.1| cytidine and deoxycytidylate deaminase family protein [Mariprofundus ferrooxydans PV-1] gi|114552429|gb|EAU54912.1| cytidine and deoxycytidylate deaminase family protein [Mariprofundus ferrooxydans PV-1] Length = 195 Score = 97.7 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 54/151 (35%), Gaps = 17/151 (11%) Query: 8 MSCALEEAQNAALRN-EIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A+ ++ P GA + +IS N AHAE++AI + Sbjct: 33 MQLAITLSRMNIESGTGGPFGAAVFDMDTHALISVGMNLVVSAHCSMAHAEMVAISSAQQ 92 Query: 65 ILSQEIL----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-------NG 113 L L +L + EPC MC AI + IR+L GAS+ + Sbjct: 93 KLGSFDLGSGTARYELVTSCEPCAMCFGAIPWSGIRQLVCGASDADARAVGFDEGPKMTD 152 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A + + Q + I+Q + Sbjct: 153 WKAALEAR---GISVRTDLCRQEAAAILQRY 180 >gi|237809037|ref|YP_002893477.1| CMP/dCMP deaminase zinc-binding [Tolumonas auensis DSM 9187] gi|237501298|gb|ACQ93891.1| CMP/dCMP deaminase zinc-binding [Tolumonas auensis DSM 9187] Length = 203 Score = 97.7 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 7/117 (5%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAI 59 M+ A+E A+ LR P ++ V + ++S N+ + T H E++AI Sbjct: 37 SDEEKMTLAIELARQNVLRGTGGPFASIIVHRQSGVLLSVGVNQVVAQNNSTLHGEVMAI 96 Query: 60 RMGCRILSQEILP----EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 +G + L Q L E +L+ + EPC MC AI + ++RL A+ I Sbjct: 97 MLGEQRLQQFSLNSQSGEYELFTSCEPCAMCMGAILWSGVKRLVCAATGEDARAIGF 153 >gi|194364355|ref|YP_002026965.1| riboflavin biosynthesis protein RibD [Stenotrophomonas maltophilia R551-3] gi|194347159|gb|ACF50282.1| riboflavin biosynthesis protein RibD [Stenotrophomonas maltophilia R551-3] Length = 361 Score = 97.7 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 57/149 (38%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ M+ AL A+ AA R VG V +++ + ++ HAE+ A+R Sbjct: 9 DHLHMANALRLAERAAYTTRPNPMVGCVIAHGERVVGQGWHQRAGG----PHAEVFALRE 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ A + R+ +P G Sbjct: 65 AG-----SEARGATAYVTLEPCAHYGRTPPCALALIEAGVSRVVAAMRDPFPKVDGGGFD 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + E+ G+ ++R++ + F Sbjct: 120 LLR----NAGIEVAEGLMAAQARELNKGF 144 >gi|299822452|ref|ZP_07054338.1| riboflavin biosynthesis protein RibD [Listeria grayi DSM 20601] gi|299815981|gb|EFI83219.1| riboflavin biosynthesis protein RibD [Listeria grayi DSM 20601] Length = 394 Score = 97.7 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 62/161 (38%), Gaps = 25/161 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 + K +M+ A++EA+ R + P VGAV V +++I + + + HAE+ Sbjct: 23 LDKHEKWMAIAIKEARKG--RGKTYKNPLVGAVIVKADRLIGKGYHASYGD----VHAEV 76 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A + + +YVTLEPC C I I +Y + Sbjct: 77 NAFQNVSNPEETKH---SSIYVTLEPCAHHGKQPPCCEKIVEMGIEHVYVAQLDSNPLVR 133 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD--FFKERR 149 G + H ++ G+ E+ + Q+ FF R Sbjct: 134 GKGVAYLEA----HGIKVTIGVLEKEAEQLNPAFHFFHRHR 170 >gi|300704870|ref|YP_003746473.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase [Ralstonia solanacearum CFBP2957] gi|299072534|emb|CBJ43884.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase [Ralstonia solanacearum CFBP2957] Length = 370 Score = 97.7 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 55/150 (36%), Gaps = 20/150 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +V M AL A+N P VG V V ++ II + HAEI AI+ Sbjct: 6 DHVMMQRALALAENGLFTT-TPNPRVGCVLVRDDTIIGEGFTQPPGQD----HAEIQAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA + A I R+ +P G Sbjct: 61 DAQARGHDVR--GATAYVTLEPCSHFGRTPPCADRLVEAGIARVVAAMEDPNPAVSGRGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 Q A ++ G+ E+ +R++ F Sbjct: 119 QKLREAG----IDVRCGLLEREARELNIGF 144 >gi|37520819|ref|NP_924196.1| riboflavin biosynthesis protein [Gloeobacter violaceus PCC 7421] gi|35211814|dbj|BAC89191.1| riboflavin biosynthesis protein [Gloeobacter violaceus PCC 7421] Length = 366 Score = 97.7 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 54/151 (35%), Gaps = 23/151 (15%) Query: 3 KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M L A+ A R P VGAV V + + + K HAE A+ Sbjct: 5 SDEDWMERCLALAEQAWGRT-TPNPLVGAVVVNDGLAVGEGFH----PKAGAPHAEAFAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + LYV LEPC C AI A ++R+ G +P G Sbjct: 60 RAAGDLA-----RGATLYVNLEPCNHHGRTPPCTEAIVAAGLQRVVIGMVDPNPIVSGRG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ R ++ + F Sbjct: 115 LERLRTAG----IEVSVGVLSDRCERLNEAF 141 >gi|683699|emb|CAA88261.1| orf2 [Saccharomyces cerevisiae] Length = 213 Score = 97.7 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 11/119 (9%) Query: 38 SRAGNRNRELKDVTAHAEILAIRMGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLA 93 + N + AHAE + I +L ++ ++ LYVT+EPC MCA+A+ Sbjct: 2 AYGMNDTNKSLTGVAHAEFMGIDQIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQL 61 Query: 94 RIRRLYYGASNPKGGGIENGTQFYTL-----ATCHHS--PEIYPGISEQRSRQIIQDFF 145 I ++ +G N + GG + + E PGI + + +++ F+ Sbjct: 62 DIGKVVFGCGNERFGGNGTVLSVNHDTCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 120 >gi|72382670|ref|YP_292025.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus str. NATL2A] gi|72002520|gb|AAZ58322.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus str. NATL2A] Length = 364 Score = 97.7 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 61/152 (40%), Gaps = 23/152 (15%) Query: 7 FMSCALEEAQNAALRNEI-P-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M +++ A A R P VG++ + N +++ + + HAEI A+ Sbjct: 14 WMRRSIQLALLAEGRTSPNPLVGSIVLDSNGRLVGEGFHS--GAGNP--HAEIEALAQAG 69 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + + VTLEPC C AI A ++++ G +P NG Sbjct: 70 KKA-----LDGTIVVTLEPCCHQGLTPPCTEAIIRAGLKKVVVGMVDPDPRVSGNGISRL 124 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF-FKER 148 + E+ G+ Q I ++F F+ R Sbjct: 125 KDSGL----EVIEGVLSQECESINREFSFRVR 152 >gi|308048548|ref|YP_003912114.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase ;5-amino-6-(5-phosphoribosylamino)uracil reductase [Ferrimonas balearica DSM 9799] gi|307630738|gb|ADN75040.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase ;5-amino-6-(5-phosphoribosylamino)uracil reductase [Ferrimonas balearica DSM 9799] Length = 373 Score = 97.7 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 52/156 (33%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNAAL--RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M+ ALE A+ L R VG V V + +++ + HAE+ A+ Sbjct: 4 TDDARHMARALELARRGQLTTRPNPRVGCVLVRDGEVVGEGFHIRAGG----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R YVTLEPC C+ A+ A + R+ +P G Sbjct: 60 RAAGDKA-----RGATAYVTLEPCSHYGRTPPCSQALIDAGVARVVAAMVDPNPQVAGRG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E G+ + + F K R Sbjct: 115 LAMLEAAG----IETQHGLMANEAEAVNPGFMKRMR 146 >gi|83746190|ref|ZP_00943244.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Ralstonia solanacearum UW551] gi|207744096|ref|YP_002260488.1| riboflavin biosynthesis bifunctional protein ribd : diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase [Ralstonia solanacearum IPO1609] gi|83727156|gb|EAP74280.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Ralstonia solanacearum UW551] gi|206595500|emb|CAQ62427.1| riboflavin biosynthesis bifunctional protein ribd : diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase [Ralstonia solanacearum IPO1609] Length = 370 Score = 97.7 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 54/150 (36%), Gaps = 20/150 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M AL A+N P VG V V ++ II + HAEI AI+ Sbjct: 6 DHAMMQRALALAENGLFTT-TPNPRVGCVLVRDDTIIGEGFTQPPGQD----HAEIQAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA + A I R+ +P G Sbjct: 61 DAQARGHDVR--GATAYVTLEPCSHFGRTPPCADRLVEAGIARVVAAMEDPNPAVSGRGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 Q A ++ G+ E+ +R++ F Sbjct: 119 QKLREAG----IDVRCGLLEREARELNIGF 144 >gi|229843994|ref|ZP_04464135.1| hypothetical protein CGSHi6P18H1_06131 [Haemophilus influenzae 6P18H1] gi|229812988|gb|EEP48676.1| hypothetical protein CGSHi6P18H1_06131 [Haemophilus influenzae 6P18H1] Length = 372 Score = 97.7 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + VFM AL+ A P VG V V N +I+ + + HAE +A+ Sbjct: 6 SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 E YVTLEPC CA + A + ++ +P G Sbjct: 62 AQAG-----ENAKGAIAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + A + + ++ +I + F K R Sbjct: 117 LKMLSDAGIESAVN----LLNDQAEKINKGFLKRMR 148 >gi|207728168|ref|YP_002256562.1| riboflavin biosynthesis bifunctional protein ribd : diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase [Ralstonia solanacearum MolK2] gi|206591413|emb|CAQ57025.1| riboflavin biosynthesis bifunctional protein ribd : diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase [Ralstonia solanacearum MolK2] Length = 370 Score = 97.7 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 54/150 (36%), Gaps = 20/150 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M AL A+N P VG V V ++ II + HAEI AI+ Sbjct: 6 DHAMMQRALALAENGLFTT-TPNPRVGCVLVRDDTIIGEGFTQPPGQD----HAEIQAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA + A I R+ +P G Sbjct: 61 DAQARGHDVR--GATAYVTLEPCSHFGRTPPCADRLVEAGIARVVAAMEDPNPAVSGRGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 Q A ++ G+ E+ +R++ F Sbjct: 119 QKLREAG----IDVRCGLLEREARELNIGF 144 >gi|194016547|ref|ZP_03055161.1| riboflavin biosynthesis protein RibD [Bacillus pumilus ATCC 7061] gi|194012020|gb|EDW21588.1| riboflavin biosynthesis protein RibD [Bacillus pumilus ATCC 7061] Length = 356 Score = 97.7 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 25/147 (17%) Query: 8 MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M+ +LE A+ A++ + P VGAV V +N+I+ + HAEI A++M Sbjct: 1 MNLSLENAR--AMKGQTSPNPLVGAVIVRDNEIVGVGAHMKAGE----PHAEIHALKMAG 54 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 +YVTLEPC+ CA A+ A + + A +P G Sbjct: 55 DKA-----KGATIYVTLEPCSHHGRTGPCAEALVKAGVETVVVAALDPNPLVAGRGIAIL 109 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ EQ S + + F Sbjct: 110 QDAG----IQVITGVLEQESILMNEVF 132 >gi|124026389|ref|YP_001015504.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus str. NATL1A] gi|123961457|gb|ABM76240.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus str. NATL1A] Length = 350 Score = 97.7 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 60/151 (39%), Gaps = 23/151 (15%) Query: 8 MSCALEEAQNAALRNEI-P-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M +++ A A R P VG+V + N +++ + + HAEI A+ + Sbjct: 1 MRRSIQLALLAEGRTSPNPLVGSVVLDSNGRLVGEGFHT--GAGNP--HAEIEALAQAGK 56 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 L + VTLEPC C AI A ++++ G +P NG Sbjct: 57 K----SLDG-TIVVTLEPCCHQGLTPPCTEAIIKAGLKKVVVGMVDPDPRVSGNGISRLK 111 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF-FKER 148 + E+ G+ Q I ++F F+ R Sbjct: 112 DSGL----EVIEGVLSQECESINREFSFRVR 138 >gi|296166141|ref|ZP_06848586.1| cytosine deaminase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898550|gb|EFG78111.1| cytosine deaminase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 150 Score = 97.7 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 13/142 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+EA+ IP+GA + ++ R NR + D + HAE+ A R R Sbjct: 9 MDVALDEARAGLAEGGIPIGAALFTADGVLLGRGRNRRVQRGDPSLHAEVDAFRAAGR-- 66 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 Q + TL PC C+ + I L G S GG + S Sbjct: 67 -QRDYRSTVMVTTLAPCWYCSGLVRQFNIGSLLVGESRTFTGG----HDWLAANGI--SV 119 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 + + ++R ++ F E Sbjct: 120 TV---LDDERCATMMAAFIAEH 138 >gi|91202314|emb|CAJ75374.1| strongly similar to riboflavin biosynthesis protein RibD [Candidatus Kuenenia stuttgartiensis] Length = 367 Score = 97.3 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 26/157 (16%) Query: 1 MKK-GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55 MK+ +M+ ALE A+ R + P VGAV V NN+I+ + ++N AHAE Sbjct: 4 MKEHDEEYMTLALELAEKG--RGMVEPNPMVGAVIVKNNEIVGKGYHKNYGG----AHAE 57 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGG 109 I AI G LYVT+EPC CAAAI LA I ++ +P Sbjct: 58 IHAINEGGVNC-----KGATLYVTMEPCAHYGKTAPCAAAIILAGIAKVVTTCVDPNPVT 112 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A + G+ E +++++ FFK Sbjct: 113 SGKGVKQLQAAG----ITVRMGVMEDQAKKLNAPFFK 145 >gi|300692257|ref|YP_003753252.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase [Ralstonia solanacearum PSI07] gi|299079317|emb|CBJ51989.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase [Ralstonia solanacearum PSI07] Length = 370 Score = 97.3 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 54/150 (36%), Gaps = 20/150 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M AL A+N P VG V V ++ II + HAEI AI+ Sbjct: 6 DHAMMQRALALAENGLFTT-TPNPRVGCVLVRDDTIIGEGFTQPAGQD----HAEIQAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA + A + R+ +P G Sbjct: 61 DAQARGHDVR--GATAYVTLEPCSHFGRTPPCADRLVEAGVARVVAAMEDPNPAVSGRGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 Q A ++ G+ E+ +R++ F Sbjct: 119 QKLREAG----IDVRCGLLEREARELNIGF 144 >gi|113954800|ref|YP_730035.1| riboflavin biosynthesis protein RibD [Synechococcus sp. CC9311] gi|113882151|gb|ABI47109.1| riboflavin biosynthesis protein RibD [Synechococcus sp. CC9311] Length = 365 Score = 97.3 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 53/149 (35%), Gaps = 26/149 (17%) Query: 7 FMSCALEEAQNAALRNEI---P-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL+ A A + P VGAV + ++ + AHAE+ A+ Sbjct: 11 WMRRALQLA--ALAEGQTSPNPLVGAVVLDAQGALVGEGFHAKAGQ----AHAEVGALAQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + VTLEPC C+ A+ A I+R+ +P G Q Sbjct: 65 AG-----GRAKGGTIIVTLEPCCHQGRTPPCSEAVIQAGIQRVVVALKDPDPRVAGGGIQ 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E + + F Sbjct: 120 RLRDAGL----EVITGVLEAEAAHQNRAF 144 >gi|37521331|ref|NP_924708.1| hypothetical protein gll1762 [Gloeobacter violaceus PCC 7421] gi|35212328|dbj|BAC89703.1| gll1762 [Gloeobacter violaceus PCC 7421] Length = 182 Score = 97.3 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 14/143 (9%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS---Q 68 + EA A + VGA+ K+++ N+ E DVTAH E+ +R L Sbjct: 27 IAEANAAVDEGKAGVGAMLTWRGKVLALEHNQYAETHDVTAHGEMSILRAQAERLDGMSD 86 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG--------GGIENGTQFYTLA 120 E ++ +YVTLEPC MC +A+SL I R+ Y A + G A Sbjct: 87 EDKKDLCMYVTLEPCLMCLSAMSLVGIPRVVYAALSEDANIEQALLEGATARNVN---DA 143 Query: 121 TCHHSPEIYPGISEQRSRQIIQD 143 E+ PG+ + ++++ Sbjct: 144 LVRGPLELVPGVRREEGIKLLER 166 >gi|118470530|ref|YP_887878.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Mycobacterium smegmatis str. MC2 155] gi|118171817|gb|ABK72713.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Mycobacterium smegmatis str. MC2 155] Length = 159 Score = 97.3 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 ++ ++ A+ A + P G+V V + NR + D TAH E R Sbjct: 7 DLKYLRRCVDLAREALDDGDEPFGSVLVDHTGTTLFEDRNRV-KDGDATAHPEFAIARWA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 R L+ + +Y + E C MCAAA + + R+ Y S+ + GG Sbjct: 66 ARHLTPDRRARATVYTSGEHCPMCAAAHAWVGLGRIVYATSSAQLGG 112 >gi|302900034|ref|XP_003048181.1| hypothetical protein NECHADRAFT_93328 [Nectria haematococca mpVI 77-13-4] gi|256729113|gb|EEU42468.1| hypothetical protein NECHADRAFT_93328 [Nectria haematococca mpVI 77-13-4] Length = 166 Score = 97.3 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 10/149 (6%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 K + A+ A+ A + P G+V V + K++ NR D T H E R Sbjct: 4 DKDIQHLRLAVSLAREALQAGDFPFGSVLVSASGKVLQTDRNRETTGSDSTLHPEFTLAR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY-------GASNPKGGGIENG 113 + LS E +Y + E C MC+AA + + R+ Y GA + G ++ Sbjct: 64 WAEQNLSPTERAESTVYTSGEHCAMCSAAHAWCGLGRIVYASSTEQLGAWRDEYGIGKSP 123 Query: 114 TQFYTLATCHHSPEIYPGI--SEQRSRQI 140 ++ ++ + +Q R + Sbjct: 124 VSPLSIQQVAPGIQVEGPVEGLDQEVRAL 152 >gi|323497966|ref|ZP_08102975.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil [Vibrio sinaloensis DSM 21326] gi|323317011|gb|EGA70013.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil [Vibrio sinaloensis DSM 21326] Length = 368 Score = 97.3 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 31/153 (20%) Query: 8 MSCALEEAQNAALRNEI------P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 MS A++ A+ + P VG V N +++ + HAE+ A+R Sbjct: 12 MSRAIDLAK-----GGVYTTAPNPNVGCVITRNEEVVGEGFHYRAGE----PHAEVHALR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC CA + A++ ++ + +P G Sbjct: 63 MAGEQS-----VGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICASQDPNPQVAGRGI 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + A E+ G+ EQ + + F K Sbjct: 118 KMLRDAG----IEVEVGLLEQEALALNPGFIKR 146 >gi|319897565|ref|YP_004135762.1| riboflavin biosynthesis protein ribd [Haemophilus influenzae F3031] gi|317433071|emb|CBY81445.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae F3031] Length = 372 Score = 97.3 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + VFM AL+ A P VG V V N +I+ + + HAE +A+ Sbjct: 6 SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 E YVTLEPC CA + A + ++ +P G Sbjct: 62 AQAG-----ENAKGATAYVTLEPCAHYGRTSPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + A + + ++ +I + F K R Sbjct: 117 LKMLSDAGIESAVN----LLNDQAEKINKGFLKRMR 148 >gi|118602777|ref|YP_903992.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567716|gb|ABL02521.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 349 Score = 97.3 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 21/153 (13%) Query: 2 KKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 K M AL+ A +++ VG V V + KII++ ++ AH EI A+ Sbjct: 7 KNDTQNMVIALKLASQGKYGVKSNPMVGCVIVKHTKIIAKGYHQTFGK----AHGEINAL 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + YVTLEPC CA AI + ++++ +P G Sbjct: 63 QQ-----INHQAQGATFYVTLEPCSHQGKTPSCAQAIIHSGVKKVIIAMLDPNPLVNGKG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + E+ G+ E + + Q F K Sbjct: 118 VVMLE----NAGIEVKIGLLENDALTLNQGFIK 146 >gi|260775295|ref|ZP_05884192.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio coralliilyticus ATCC BAA-450] gi|260608476|gb|EEX34641.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio coralliilyticus ATCC BAA-450] Length = 368 Score = 97.3 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 55/153 (35%), Gaps = 21/153 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + MS A+E A+ P VG V L++ I+ + HAE+ A+R Sbjct: 7 QDYQMMSRAIELAKGGIYTTAPNPNVGCVITLDDDIVGEGFHYRAGE----PHAEVHALR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC CA + A++ ++ +P G Sbjct: 63 MAGDKS-----VGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMEDPNPQVAGRGI 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + A E+ G+ E + + F K Sbjct: 118 KMLCDAG----IEVQVGLLESDAMALNSAFIKR 146 >gi|242042489|ref|XP_002468639.1| hypothetical protein SORBIDRAFT_01g049430 [Sorghum bicolor] gi|241922493|gb|EER95637.1| hypothetical protein SORBIDRAFT_01g049430 [Sorghum bicolor] Length = 396 Score = 97.3 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 59/149 (39%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M +E A+ AA P VG V V + +++ + K HAE+ A+R Sbjct: 52 DAQYMRRCVELARKAAGHTSPNPMVGCVIVRDGRVVGEGFH----PKAGQPHAEVFALRD 107 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YV+LEPC C A+ A+++ + G ++P G + Sbjct: 108 AGNLAEN-----ATAYVSLEPCNHYGRTPPCTEALINAKVKEVVVGMTDPNPIVASKGIE 162 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + + G+ E R++ + + Sbjct: 163 KLQGAGIN----VRVGVEEALCRKLNEAY 187 >gi|186680558|ref|YP_001863754.1| riboflavin biosynthesis protein RibD [Nostoc punctiforme PCC 73102] gi|186463010|gb|ACC78811.1| riboflavin biosynthesis protein RibD [Nostoc punctiforme PCC 73102] Length = 407 Score = 97.3 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 19/152 (12%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M LE A+ A R P VGAV V + +I+ + HAE+ A++ Sbjct: 39 DSRMMLRCLELARRALGRTSPNPLVGAVIVKDGEIVGEGFHPRAGE----PHAEVFALQA 94 Query: 62 G---CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + +YV LEPC C+ + A + ++ G +P Sbjct: 95 AGVGAASPQENRARGATIYVNLEPCNHYGRTPPCSEGLIQAGVAKVVVGMVDPNPLVAGG 154 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A E+ G+ E Q+ + F Sbjct: 155 GIARLRAAG----IEVLVGVEESACHQLNEAF 182 >gi|262404604|ref|ZP_06081159.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio sp. RC586] gi|262349636|gb|EEY98774.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio sp. RC586] Length = 367 Score = 97.3 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 64 AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLVKAGVAKVICAMQDPNPQVAGRGVQ 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + + F K Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146 >gi|317969093|ref|ZP_07970483.1| riboflavin biosynthesis protein ribD (diaminohydroxyphosphoribosylaminopyrimidine deaminase / [Synechococcus sp. CB0205] Length = 371 Score = 97.3 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 55/150 (36%), Gaps = 22/150 (14%) Query: 7 FMSCALEEAQNAALRNEI-P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL+ A A R P VG V + ++ +R T HAE+ A+ Sbjct: 20 WMQRALQLAALGAGRTSPNPLVGCVVLDRQGALVGEGFHRRA----GTPHAEVHALSQAG 75 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 E V+LEPC C+ A+ A +RR+ +P G Sbjct: 76 -----ERAQGGTAIVSLEPCCHHGRTPPCSEALIAAGVRRVVVAMRDPDPRVAGGGIAQL 130 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E ++ + + F + Sbjct: 131 QAAG----IEVISGVCEAEAQALNRSFIQR 156 >gi|299067739|emb|CBJ38948.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase [Ralstonia solanacearum CMR15] Length = 370 Score = 97.3 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 55/150 (36%), Gaps = 20/150 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M AL A+N P VG V V ++ +I + D HAEI AI+ Sbjct: 6 DHAMMQRALALAENGLFTT-TPNPRVGCVLVRDDTVIGEGFTQP-AGHD---HAEIQAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA + A I R+ +P G Sbjct: 61 DAQARGHDVR--GATAYVTLEPCSHFGRTPPCADRLIEAGIARVVTAMEDPNPTVSGRGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 Q A ++ G+ E+ +R++ F Sbjct: 119 QRLRQAG----IDVRCGLLEREARELNIGF 144 >gi|325282059|ref|YP_004254601.1| riboflavin biosynthesis protein RibD [Odoribacter splanchnicus DSM 20712] gi|324313868|gb|ADY34421.1| riboflavin biosynthesis protein RibD [Odoribacter splanchnicus DSM 20712] Length = 397 Score = 97.3 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 41/157 (26%), Positives = 59/157 (37%), Gaps = 26/157 (16%) Query: 1 MK-KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55 M+ K +M+ A A R + P VGAV V + +II + HAE Sbjct: 21 METKDREYMNRARILADRG--RGWVNPNPLVGAVIVKDGRIIGEGWHERYGGL----HAE 74 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109 A + E LYVTLEPC C A+ RI R+ G +P Sbjct: 75 RNAFKQ-----CTEDPAGATLYVTLEPCCHYGKTPPCTEAVIENRIARVVVGLLDPNPLV 129 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A + G+ E++ R+ + F K Sbjct: 130 AGKGIEMLRKAG----IVVETGVEEEKLREQNRVFLK 162 >gi|145589924|ref|YP_001156521.1| CMP/dCMP deaminase, zinc-binding [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048330|gb|ABP34957.1| CMP/dCMP deaminase, zinc-binding protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 186 Score = 97.3 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 17/133 (12%) Query: 25 PVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 P GA + KI+++ N+ + H E++ I + + LY T EP Sbjct: 54 PFGAAITNSKSGKILAQGVNKTFS--NPVLHGEMVCINQYVAQHGNQGWANLILYTTGEP 111 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT-------CHHSPEIYPGISEQ 135 C MC +A+ + I + YG+S ++G +T + ++ GI E Sbjct: 112 CPMCMSALIWSGIGGVVYGSSANTIK--KSGIDIFTFSAKEINQGNNFSQTQLLGGILEA 169 Query: 136 RSRQIIQDFFKER 148 + F R Sbjct: 170 ECDSL----FANR 178 >gi|262170762|ref|ZP_06038440.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio mimicus MB-451] gi|261891838|gb|EEY37824.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio mimicus MB-451] Length = 367 Score = 96.9 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 64 AGELTH-----GATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQ 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + + F K Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146 >gi|190572771|ref|YP_001970616.1| putative deaminase [Stenotrophomonas maltophilia K279a] gi|190010693|emb|CAQ44302.1| putative deaminase [Stenotrophomonas maltophilia K279a] Length = 361 Score = 96.9 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 57/149 (38%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ M+ AL A+ AA R VG V +++ + ++ HAE+ A+R Sbjct: 9 DHLHMANALRLAERAAYTTRPNPMVGCVIAHGERVVGQGWHQRAGG----PHAEVFALRE 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ A + R+ +P G Sbjct: 65 AG-----SEARGATAYVTLEPCAHYGRTPPCALALIEAGVSRVVAAMRDPFPKVDGGGFD 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + E+ G+ ++R++ + F Sbjct: 120 LLR----NAGIEVAEGLMAAQARELNKGF 144 >gi|149378281|ref|ZP_01895992.1| riboflavin biosynthesis protein RibD [Marinobacter algicola DG893] gi|149357446|gb|EDM45957.1| riboflavin biosynthesis protein RibD [Marinobacter algicola DG893] Length = 371 Score = 96.9 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 52/153 (33%), Gaps = 21/153 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM+ A++ A + P VG V +K++ + AHAE A+ Sbjct: 5 QDTAFMARAVQLAWRGRYSTHPNPRVGCVIARGSKVLGEGWHERAGE----AHAETRALS 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA A+ A I ++ +P G Sbjct: 61 QAG-----PDARGATAYVTLEPCSHFGRTPPCAKALIEAGIAHVFAATKDPNPSVSGRGL 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ + + ++ F K Sbjct: 116 DMLREAG----IRVTEGLLAEEAVRLNPGFMKR 144 >gi|258627340|ref|ZP_05722124.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio mimicus VM603] gi|258580378|gb|EEW05343.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio mimicus VM603] Length = 367 Score = 96.9 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 64 AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQ 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + + F K Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146 >gi|16331497|ref|NP_442225.1| riboflavin biosynthesis protein [Synechocystis sp. PCC 6803] gi|2833460|sp|Q55158|RIBD_SYNY3 RecName: Full=Riboflavin biosynthesis protein RibD; Includes: RecName: Full=Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase; Includes: RecName: Full=5-amino-6-(5-phosphoribosylamino)uracil reductase; AltName: Full=HTP reductase gi|1001153|dbj|BAA10295.1| riboflavin biosynthesis protein [Synechocystis sp. PCC 6803] Length = 368 Score = 96.9 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 59/157 (37%), Gaps = 22/157 (14%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M M L A+ A P VG+V V ++I+ + + + H EI A Sbjct: 1 MISDQTHMRRCLTLAKTAIGKTAPNPLVGSVIVQGDEIVGQGFH--PQAGQP--HGEIFA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + + LYV LEPC C AI A I ++ G +P Sbjct: 57 L-----WEAGDRAKGATLYVNLEPCNHQGRTPPCTEAIIQAGIAKVVVGMVDPNPLVAGK 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF-FKER 148 G A E+ G+ E+ +++ + F F+ + Sbjct: 112 GISRLRQAG----IEVKVGVEEEACQRLNEAFCFRIK 144 >gi|254286058|ref|ZP_04961019.1| riboflavin biosynthesis protein RibD [Vibrio cholerae AM-19226] gi|150423968|gb|EDN15908.1| riboflavin biosynthesis protein RibD [Vibrio cholerae AM-19226] Length = 367 Score = 96.9 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 64 AGELTH-----GATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQ 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + + F K Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146 >gi|225629653|ref|ZP_03787646.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591494|gb|EEH12541.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 130 Score = 96.9 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 53/144 (36%), Gaps = 25/144 (17%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + FMS AL A+ + P VG V V + I+S HAE++A Sbjct: 2 TDDHFMSIALRLAEKNL--GNVAPNPAVGCVIVKDGTIVSEGY----TGIGGRPHAEVVA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 ++ +Y+TLEPC C A I A I+R+ +P Sbjct: 56 LQNAKDSTH-----GATIYITLEPCCHHGVTGPCTAKIIKASIKRVVIATIDPDSRVSGR 110 Query: 113 GTQFYTLATCHHSPEIYPGISEQR 136 G + A E+ GI ++ Sbjct: 111 GMKALKEAG----IEVEQGIMQKE 130 >gi|88811147|ref|ZP_01126403.1| riboflavin biosynthesis protein RibD [Nitrococcus mobilis Nb-231] gi|88791686|gb|EAR22797.1| riboflavin biosynthesis protein RibD [Nitrococcus mobilis Nb-231] Length = 376 Score = 96.9 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 56/154 (36%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ AL A+ P VG V V N +++ +R HAEI Sbjct: 14 DRQYMAHALRLAKRGLFSTGPNPRVGCVIVRNGQLVGEGWHRRAGE----PHAEIN---- 65 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + + LYVTLEPC C A+ A I R+ +P G + Sbjct: 66 -ALAAAGQAARGAILYVTLEPCCHHGRTPPCTTALLSAGITRVIAACKDPNPRVAGQGLE 124 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 T A G+ ++++ + FFK R Sbjct: 125 QLTAAG----ITTRHGLMAEQAQTLNPGFFKRMR 154 >gi|229524273|ref|ZP_04413678.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae bv. albensis VL426] gi|229337854|gb|EEO02871.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae bv. albensis VL426] Length = 367 Score = 96.9 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 64 AAELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + + F K Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146 >gi|294508343|ref|YP_003572401.1| riboflavin biosynthesis protein RibD [Salinibacter ruber M8] gi|294344671|emb|CBH25449.1| riboflavin biosynthesis protein RibD [Salinibacter ruber M8] Length = 397 Score = 96.9 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 21/153 (13%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILA 58 +M L+ A+ A + P VGAV + + ++ +R HAE A Sbjct: 24 HVPWMKRCLDLARTGA--GTVSPNPMVGAVLLAPDGTVLGEGAHRTYGG----PHAEARA 77 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++ + S L LYV LEPC C I + R+ G +P Sbjct: 78 LQAAEQQHSPAALQNATLYVNLEPCRHHGKTPPCTDLIVEKNVPRVVVGTVDPFPQAQGR 137 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + E+ G+ E R++ + FF Sbjct: 138 GIRQLREQG----VEVEVGVHEHACRRLNEAFF 166 >gi|209694491|ref|YP_002262419.1| pyrimidine deaminase/pyrimidine reductase (riboflavin biosynthesis protein RibD) [Aliivibrio salmonicida LFI1238] gi|208008442|emb|CAQ78607.1| pyrimidine deaminase/pyrimidine reductase (riboflavin biosynthesis protein RibD) [Aliivibrio salmonicida LFI1238] Length = 373 Score = 96.9 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 52/150 (34%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++ M A++ A+ P VG V V N I+ + HAE+ A+R Sbjct: 6 QDHLMMQRAIQLAKRGIYTTAPNPNVGCVLVKNGLIVGEGAHLKAGE----PHAEVHALR 61 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E YVTLEPC CA + A + ++ +P G Sbjct: 62 QA-----SENAKGATAYVTLEPCSHYGRTPPCAEGLIKAGVVKVICAMVDPNPQVAGRGL 116 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E G+ E SR + F Sbjct: 117 AMLEAAG----IETASGLLETESRALNPSF 142 >gi|116193885|ref|XP_001222755.1| hypothetical protein CHGG_06660 [Chaetomium globosum CBS 148.51] gi|88182573|gb|EAQ90041.1| hypothetical protein CHGG_06660 [Chaetomium globosum CBS 148.51] Length = 551 Score = 96.9 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 35/69 (50%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + FM AL+ A+ A NE PVG V V ++I+R N ++ T HAE++AI Sbjct: 216 HSRFMREALDMARLALKTNETPVGCVLVYKGRVIARGMNATNVTRNGTRHAELMAISALL 275 Query: 64 RILSQEILP 72 L + L Sbjct: 276 SYLPKSDLE 284 Score = 67.2 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 29/49 (59%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 E LYVT+EPC MCA+ + I+++Y+GA N K GG + + + Sbjct: 346 TECTLYVTVEPCVMCASLLRQFGIKKVYFGAVNDKFGGTGGVFRIHKNS 394 >gi|153826812|ref|ZP_01979479.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MZO-2] gi|149739399|gb|EDM53641.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MZO-2] Length = 367 Score = 96.9 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 64 AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + + F K Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146 >gi|153803015|ref|ZP_01957601.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MZO-3] gi|124121458|gb|EAY40201.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MZO-3] Length = 367 Score = 96.9 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 64 AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + + F K Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146 >gi|119774153|ref|YP_926893.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase., 5-amino-6-(5-phosphoribosylamino)uracil reductase [Shewanella amazonensis SB2B] gi|119766653|gb|ABL99223.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Shewanella amazonensis SB2B] Length = 378 Score = 96.9 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 52/150 (34%), Gaps = 22/150 (14%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 M+ A+ A+ P VG V V + I+ + HAE+ A++ Sbjct: 11 DRAMMARAIMLAKRGQYTTRPNPNVGCVIVNDAGDIVGEGWHIRAGG----PHAEVHALK 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA A+ ++R+ ++P G Sbjct: 67 AAADKA-----RGATAYVTLEPCSHYGRTPPCAKALIDNGLKRVVVAMTDPNPQVAGRGI 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ E +R + F Sbjct: 122 KLLQDAG----IEVAHGLMEAEARALNPGF 147 >gi|262190240|ref|ZP_06048514.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae CT 5369-93] gi|262033885|gb|EEY52351.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae CT 5369-93] Length = 365 Score = 96.9 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 6 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 62 AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + + F K Sbjct: 117 MLRDAG----IEVEVGLLEADARALNRGFLKR 144 >gi|229528728|ref|ZP_04418118.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae 12129(1)] gi|229332502|gb|EEN97988.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae 12129(1)] Length = 367 Score = 96.9 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 64 AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + + F K Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146 >gi|297580914|ref|ZP_06942839.1| riboflavin biosynthesis protein RibD [Vibrio cholerae RC385] gi|297534740|gb|EFH73576.1| riboflavin biosynthesis protein RibD [Vibrio cholerae RC385] Length = 367 Score = 96.9 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 64 AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + + F K Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146 >gi|316934111|ref|YP_004109093.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris DX-1] gi|315601825|gb|ADU44360.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris DX-1] Length = 389 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 47/142 (33%), Gaps = 21/142 (14%) Query: 4 GNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL + R P VGAV V + I+ R HAE+ A+R Sbjct: 27 DQRFMQLALALGRRGQGRTGTNPAVGAVLVKDGVIVGRGW----TQDGGRPHAEVEALRR 82 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 LYVTLEPC CA AI A I R+ +P G Sbjct: 83 AGEAA-----RGATLYVTLEPCSHHGRSPPCADAIVAAGIARVVSAIEDPNPLVAGQGHA 137 Query: 116 FYTLATCHHSPEIYPGISEQRS 137 A + GI + Sbjct: 138 KLRAAG----IAVEIGICADEA 155 >gi|332709146|ref|ZP_08429113.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Lyngbya majuscula 3L] gi|332352057|gb|EGJ31630.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Lyngbya majuscula 3L] Length = 372 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 53/145 (36%), Gaps = 23/145 (15%) Query: 9 SCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++ A+ A R P VG V V N +I+ + HAE+ A+ Sbjct: 20 QRCIQLARQALGRT-TPNPLVGCVIVRNGEIVGEGFH--PAAGQP--HAEVFALSEAG-- 72 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E +YV LEPC C A+ A + ++ G +P G + Sbjct: 73 ---ENAQGATVYVNLEPCNHYGRTPPCTEALIKAGVAKVVVGMVDPDPRVSGKGIERLRA 129 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E RQ+ + F Sbjct: 130 AG----IEVVVGVEESACRQLNEGF 150 >gi|312131512|ref|YP_003998852.1| riboflavin biosynthesis protein ribd [Leadbetterella byssophila DSM 17132] gi|311908058|gb|ADQ18499.1| riboflavin biosynthesis protein RibD [Leadbetterella byssophila DSM 17132] Length = 322 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 61/151 (40%), Gaps = 19/151 (12%) Query: 7 FMSCALEEAQNAAL--RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M ALE A VG V V N+KII +R HAE+ A+ Sbjct: 3 YMKRALELAALGREWVSPNPMVGCVIVHNDKIIGEGFHRKYGQ----PHAEVNAVDS--- 55 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + + +L E +YVTLEPC CA + +++++ +P G Sbjct: 56 VEDKSLLSESTVYVTLEPCAHFGKTPPCAELLIKHKVKKVVVCNLDPFPQVAGKGITMLK 115 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + ++ G+ ++ ++ + FFK R Sbjct: 116 ----NAGIDVEVGLLQEEGEELNKRFFKRHR 142 >gi|325971563|ref|YP_004247754.1| CMP/dCMP deaminase zinc-binding protein [Spirochaeta sp. Buddy] gi|324026801|gb|ADY13560.1| CMP/dCMP deaminase zinc-binding protein [Spirochaeta sp. Buddy] Length = 169 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 11/126 (8%) Query: 15 AQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73 A A + P GA+ + I+ GN E HAE L + R+ + + L Sbjct: 24 AHTAKEQGNHPFGALLADKDGNILLEQGNSYEEGGSA-MHAETLLLFKASRLYAPDFLAT 82 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGGIENG--TQFYTLATCHHS-- 125 LY EPC MC A+ +RRL YG + K G E + H Sbjct: 83 CSLYTNAEPCVMCTGAMYWTNVRRLVYGITEAKLLELTGADEQNPTFDLPSHEVLAHGQK 142 Query: 126 -PEIYP 130 E+ Sbjct: 143 DIEVVG 148 >gi|153828188|ref|ZP_01980855.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 623-39] gi|229522216|ref|ZP_04411633.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae TM 11079-80] gi|148876277|gb|EDL74412.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 623-39] gi|229341141|gb|EEO06146.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae TM 11079-80] Length = 367 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 64 AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + + F K Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146 >gi|296158395|ref|ZP_06841226.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. Ch1-1] gi|295891339|gb|EFG71126.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. Ch1-1] Length = 180 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 53/137 (38%), Gaps = 16/137 (11%) Query: 13 EEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 A+ A L P GAV V ++ ++ GN D HAE + R+ + E Sbjct: 37 RVAERATLLGHHPFGAVLVGPDQETVLMEQGNV-----DTVNHAESVLARVAALNFTPEY 91 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-GGGIE--------NGTQFYTLAT 121 L LY ++EPC MCA + A I R+ +G + + + Y Sbjct: 92 LWSCTLYTSVEPCCMCAGTMYWANIGRVVFGMTEKRLLEATGDHAENPTMSVDCRYVFDH 151 Query: 122 CHHSPEIYPGISEQRSR 138 C E+ ++E + Sbjct: 152 CQKPVEVIGPVAEMEAE 168 >gi|119358266|ref|YP_912910.1| CMP/dCMP deaminase, zinc-binding [Chlorobium phaeobacteroides DSM 266] gi|119355615|gb|ABL66486.1| CMP/dCMP deaminase, zinc-binding protein [Chlorobium phaeobacteroides DSM 266] Length = 197 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 12/145 (8%) Query: 12 LEEAQ-NAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 +E A+ N + P GA + K+++ N AHAE++AI + + LS Sbjct: 39 IELARLNTVEKTGGPFGAAVFESRSGKLVAAGVNVVVTSSCSHAHAEMVAILLAQQKLST 98 Query: 69 EIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG----TQFYTL 119 L P+ +L + EPC MC AI + +++L +GA+ + + Sbjct: 99 YDLGLSSLPDHELVSSCEPCAMCFGAIIWSGVKKLVFGATGKTAKAAGFDEGPKPRLWIR 158 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ P + + + I++++ Sbjct: 159 ALEQRGIEVTPRVCCKEAEAILENY 183 >gi|307129900|ref|YP_003881916.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Dickeya dadantii 3937] gi|306527429|gb|ADM97359.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Dickeya dadantii 3937] Length = 370 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 60/155 (38%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ ALE A+ + P VG V V +++I+ ++ HAE+ A+R Sbjct: 5 SDEFYMARALELARRGRFTTSPNPNVGCVIVRDDEIVGEGYHQKAGE----PHAEVHALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC CA A+ A + R+ +P G Sbjct: 61 MAGDKA-----RGATAYVTLEPCSHHGRTPPCADALLAAGVARVVAAMQDPNPQVAGRGL 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ + +++ +I + F K R Sbjct: 116 HRLQQAG----IEVRHSVLMEQAEKINRGFLKRMR 146 >gi|83815727|ref|YP_446405.1| riboflavin biosynthesis protein RibD [Salinibacter ruber DSM 13855] gi|83757121|gb|ABC45234.1| riboflavin biosynthesis protein RibD [Salinibacter ruber DSM 13855] Length = 373 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 7 FMSCALEEAQNAALRNEI---P-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M L+ A+ A + P VGAV + + ++ +R HAE A++ Sbjct: 3 WMKRCLDLARTGA--GTVSPNPMVGAVLLAPDGTVLGEGAHRTYGG----PHAEARALQA 56 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + S L LYV LEPC C I + R+ G +P G + Sbjct: 57 AEQQHSPAALQNATLYVNLEPCRHHGKTPPCTDLIVEKNVPRVVVGTVDPFPQAQGRGIR 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 E+ G+ E R++ + FF Sbjct: 117 QLREQG----VEVEVGVHEHACRRLNEAFF 142 >gi|306821102|ref|ZP_07454718.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550795|gb|EFM38770.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 108 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 4/103 (3%) Query: 50 VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK--- 106 T HAE IR C L E LY + EPC MC+ A+ ++ RL YGASN + Sbjct: 3 PTVHAEAGLIREFCAKTGISNLQEYTLYSSCEPCFMCSGAMVWVKLGRLVYGASNMELEN 62 Query: 107 -GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 G PE+ G+ S +++++ F + Sbjct: 63 ILGNEGCNCSKLVFDNSFWKPEVTEGVLRDESLEVLKEHFSKH 105 >gi|163755421|ref|ZP_02162541.1| riboflavin biosynthesis protein RibD [Kordia algicida OT-1] gi|161324841|gb|EDP96170.1| riboflavin biosynthesis protein RibD [Kordia algicida OT-1] Length = 340 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 59/154 (38%), Gaps = 24/154 (15%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M L+ A N +P VGA+ V N+ II HAE+ A+ Sbjct: 1 MKRCLQLAANGLPTA-MPNPSVGAIIVHNDMIIGEGYTSAYGGN----HAEVNAVHS--- 52 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + + +L E +YV+LEPC C+ I +I ++ G +P G + Sbjct: 53 VKDKSLLKEATMYVSLEPCSHFGKTPPCSDLIIKHQIPKVVIGTIDPFAKVAGKGIEKLQ 112 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 A C E+ + + + FF + +R Sbjct: 113 NAGC----EVILNVLKDECIASNKRFFTFHQHKR 142 >gi|62185466|ref|YP_220251.1| riboflavin biosynthesis protein RibD [Chlamydophila abortus S26/3] gi|62148533|emb|CAH64304.1| riboflavin biosynthesis protein RibD [Chlamydophila abortus S26/3] Length = 368 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 21/155 (13%) Query: 2 KKGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ FM A+E + A P VG V V N +II + + HAE AI Sbjct: 6 EQQLFFMRRAIELGEKGAFSSQPNPWVGCVIVKNGRIIGEGYH--EKAGQP--HAEEKAI 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R E + ++YVTLEPC C + ++ +Y +P G Sbjct: 62 RSA-----SESIEGSEVYVTLEPCCHYGNTPPCVNLLIKYKVAAVYIALLDPDSRVSGRG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 A +Y G+ ++ + + ++ + +R Sbjct: 117 AASLRKAG----ICVYEGLGKEEAERSLKSYIYQR 147 >gi|258405543|ref|YP_003198285.1| riboflavin biosynthesis protein RibD [Desulfohalobium retbaense DSM 5692] gi|257797770|gb|ACV68707.1| riboflavin biosynthesis protein RibD [Desulfohalobium retbaense DSM 5692] Length = 384 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 47/158 (29%), Positives = 62/158 (39%), Gaps = 31/158 (19%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTA----HAEILAIR 60 M A+E + R P VGAV N +++ + TA HAE+ AI Sbjct: 1 MQHAVELGETGFGRT-APNPCVGAVITRNGAVMAEGYH--------TACGAPHAEVEAIA 51 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + L E L+VTLEPC C AI A IR + G +P GT Sbjct: 52 QA--RAAGVDLSECTLWVTLEPCNHHGRTPPCTKAIIEAGIRSVGIGTLDPNPHVGGGGT 109 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 F E+ GI E R +I DF +E+R Sbjct: 110 AFLRDQG----VEVEVGILEPACRDLIADFLLWQQEKR 143 >gi|17545434|ref|NP_518836.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Ralstonia solanacearum GMI1000] gi|17427726|emb|CAD14245.1| probable riboflavin biosynthesis bifunctional ribd : diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 370 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 54/150 (36%), Gaps = 20/150 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M AL A+N P VG V V ++ +I + HAEI AI+ Sbjct: 6 DHAMMQRALALAENGLFTT-TPNPRVGCVLVRDDTVIGEGFTQPAGQD----HAEIQAIK 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA + A I R+ +P G Sbjct: 61 DAQARGHDVR--GATAYVTLEPCSHFGRTPPCADRLVEAGIARVVAAMEDPNPTVSGRGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 Q A ++ G+ E+ +R++ F Sbjct: 119 QRLREAG----IDVRCGLLEREARELNIGF 144 >gi|262274779|ref|ZP_06052590.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Grimontia hollisae CIP 101886] gi|262221342|gb|EEY72656.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Grimontia hollisae CIP 101886] Length = 373 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 52/151 (34%), Gaps = 21/151 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M A+E A+ P VG V + I+ + HAE+ A+R Sbjct: 6 DSQMMLRAIELAKRGIYTTAPNPNVGCVITQGDDIVGEGFHFRAGE----PHAEVYALRA 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ A + R+ +P G Q Sbjct: 62 AGEKAC-----GATAYVTLEPCSHHGRTPPCADALIAAGVSRVVCAMVDPNPKVAGRGIQ 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A ++ G+ + ++ + F K Sbjct: 117 RMRDAG----IQVDVGLMQAQAEALNPGFIK 143 >gi|212716410|ref|ZP_03324538.1| hypothetical protein BIFCAT_01333 [Bifidobacterium catenulatum DSM 16992] gi|212660663|gb|EEB21238.1| hypothetical protein BIFCAT_01333 [Bifidobacterium catenulatum DSM 16992] Length = 310 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 51/153 (33%), Gaps = 18/153 (11%) Query: 1 MKKGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + +M+ ALE A A N P VG V V + +I++ + HAE +A Sbjct: 23 MPQYRKYMTQALELAHKGAGWVNPNPLVGTVVVRDGEILAAGYHDRYRG----PHAERMA 78 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + TLEPC C I I R+ G+ +P Sbjct: 79 FDYADEHGV--DMHGATVIDTLEPCCHVGSQPACTDLILSHGITRVVVGSIDPNPIVAGK 136 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G E+ + I + FF Sbjct: 137 GLCILEENG----VEVVYDVMRAECDAINRHFF 165 >gi|325266968|ref|ZP_08133639.1| riboflavin biosynthesis protein RibD [Kingella denitrificans ATCC 33394] gi|324981709|gb|EGC17350.1| riboflavin biosynthesis protein RibD [Kingella denitrificans ATCC 33394] Length = 369 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 52/157 (33%), Gaps = 24/157 (15%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M A+E A + P VG V +I+ + + HAE+ A+R Sbjct: 12 DAAHMRRAIELAWLGRFSTSPNPRVGCVIAHGGQIVGQGFHVQAGF----PHAEVHALRQ 67 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + R+ +P G Sbjct: 68 AGDLA-----RGATAYVTLEPCSHHGRTPPCAEGLIAAGVARVVIAMGDPNPLVAGKGIA 122 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A + G+ +R + + F + RR Sbjct: 123 LLQAAG----ISVQCGLLADEARALNRGFLSRIERRR 155 >gi|307718159|ref|YP_003873691.1| hypothetical protein STHERM_c04460 [Spirochaeta thermophila DSM 6192] gi|306531884|gb|ADN01418.1| hypothetical protein STHERM_c04460 [Spirochaeta thermophila DSM 6192] Length = 362 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 19/128 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VGAV V + +++ + L HAE+ A+ E ++YVTLEPC Sbjct: 29 VGAVVVKDGRVVGEGFHERAGL----PHAEVAALSEAG-----EEARGAEMYVTLEPCCH 79 Query: 84 ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C AI A +RR+ +P G A E+ G+ + +R Sbjct: 80 WGRTPPCTDAILKAGVRRVVVACRDPNPQVAGKGLSILAEAG----VEVEVGVLSREARW 135 Query: 140 IIQDFFKE 147 + + F Sbjct: 136 LNRGFISR 143 >gi|301055607|ref|YP_003793818.1| riboflavin biosynthesis protein contains N-terminal domain of RibD [Bacillus anthracis CI] gi|300377776|gb|ADK06680.1| riboflavin biosynthesis protein contains N-terminal domain of RibD [Bacillus cereus biovar anthracis str. CI] Length = 166 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ VGAV V + I+ + + HAE+ A+ Sbjct: 2 TDQEYMRIALQLAEGTCGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M +YVTLEPC C + ++R+ + NG Sbjct: 58 MAGDKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKEVKRVVIATLDCNPLVSGNGK 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A E+ G+ E + + + FF Sbjct: 113 RKLEEAG----IEVTTGVLEAEAVLLNRYFF 139 >gi|87308856|ref|ZP_01090995.1| riboflavin bifunctional biosynthesis protein RibG [Blastopirellula marina DSM 3645] gi|87288567|gb|EAQ80462.1| riboflavin bifunctional biosynthesis protein RibG [Blastopirellula marina DSM 3645] Length = 373 Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 51/146 (34%), Gaps = 20/146 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M AL+ A E P VG V V + ++I R + HAE R Sbjct: 6 DDERHMREALQLAALGQGAAEPNPMVGCVLVQHGQVIGRGYHAKYGG----PHAE----R 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + + YVTLEPC C A+ A++ R+ +P G G Sbjct: 58 AALSDCGDKQVNGATAYVTLEPCCHHGKTPPCTDALIAAKVARVVIAQQDPFGLVDGGGI 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQI 140 A + G+ E ++++ Sbjct: 118 DQLKAAG----ISVQVGLLEAEAQRL 139 >gi|254556365|ref|YP_003062782.1| Pyrimidine reductase, riboflavin biosynthesis [Lactobacillus plantarum JDM1] gi|254045292|gb|ACT62085.1| Pyrimidine reductase, riboflavin biosynthesis [Lactobacillus plantarum JDM1] Length = 355 Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 20/142 (14%) Query: 7 FMSCALEEAQNAALRN-EIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+++A+ A + + P VGAV V + ++++ + HAE+ +R Sbjct: 5 FMQMAIDQAKLAGVATYQNPQVGAVLVKDGHVLAQGYHHYFGGD----HAEVDVLRQ--- 57 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 ++ E L+VTLEPC C+A I A IR++ G +P G Q+ Sbjct: 58 -VTPEQARGATLFVTLEPCSHYGKTPPCSARIVAAGIRQVVIGQLDPHPIVGGKGRQYL- 115 Query: 119 LATCHHSPEIYPGISEQRSRQI 140 +H ++ G + R + Sbjct: 116 ---LNHGVDVVTGCLTDKVRAL 134 >gi|127512119|ref|YP_001093316.1| riboflavin biosynthesis protein RibD [Shewanella loihica PV-4] gi|126637414|gb|ABO23057.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Shewanella loihica PV-4] Length = 386 Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 56/154 (36%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M+ A++ A+ + P VG V V ++ + HAE+ A+RM Sbjct: 11 DSQMMARAIKLARKGQYTTSPNPNVGCVIVQGETLVGEGFH--IAAGGP--HAEVHALRM 66 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ A + R+ ++P G + Sbjct: 67 AGDKA-----KGATAYVTLEPCSHYGRTPPCAEALIKAEVSRVVVAVTDPNPQVSGRGIK 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ ++ + + F K R Sbjct: 122 MLQDAGIL----VEVGLHQEEAAALNPGFMKRMR 151 >gi|156186020|gb|ABU55328.1| cytidine and deoxycytidylate deaminase family protein [Callosobruchus chinensis] Length = 71 Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 3/71 (4%) Query: 35 KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 ++S A N D TAHAE+LAI+ C +LS L + D+YVTLEPC MCA AIS A Sbjct: 4 NVVSSAHN---ISNDPTAHAEMLAIKQECELLSTSTLYDSDIYVTLEPCPMCAQAISFAX 60 Query: 95 IRRLYYGASNP 105 I+R Y+GA NP Sbjct: 61 IKRXYFGAYNP 71 >gi|227514654|ref|ZP_03944703.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Lactobacillus fermentum ATCC 14931] gi|227086963|gb|EEI22275.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Lactobacillus fermentum ATCC 14931] Length = 345 Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 23/153 (15%) Query: 8 MSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL EA + P VGAV V + ++++ + AHAE AI Sbjct: 1 MQLALAEAAKGGSATWKNPQVGAVIVKDGQLLATGYHHQYGQ----AHAERDAI----SK 52 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 LS E L +YVTLEPC C+ + + R+ +P G Sbjct: 53 LSNEQLAGATIYVTLEPCFHYGKQPPCSQLLIDSHFARVVVATIDPHQVVGGKGIAQLKA 112 Query: 120 ATCHHSPEIYPGISEQRSRQIIQD---FFKERR 149 A ++ G+ + ++ + + F++++R Sbjct: 113 AG----IDVEVGLLKDQAEALNRHYFYFYRQQR 141 >gi|126727883|ref|ZP_01743711.1| riboflavin biosynthesis protein RibD [Rhodobacterales bacterium HTCC2150] gi|126702824|gb|EBA01929.1| riboflavin biosynthesis protein RibD [Rhodobacterales bacterium HTCC2150] Length = 364 Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 33/155 (21%) Query: 3 KGNVFMSCALEE-AQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTA-----HAE 55 +M A+ AQ P VG V V + ++++RA TA HAE Sbjct: 5 TDERWMRLAISLGAQRLGQTWPNPAVGCVIVKDGRVLARA---------ATAPGGRPHAE 55 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109 A+ +YV+LEPC CA A+ AR+ R+ YG +P Sbjct: 56 TQALD-------GINAKGSTVYVSLEPCAHTGKTPPCAQALIDARVARVVYGMRDPDCRV 108 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 GT + A + + E+++ Q F Sbjct: 109 DGKGTSMLSAAG----IAVTGPVLEKQALAANQGF 139 >gi|260063122|ref|YP_003196202.1| riboflavin biosynthesis protein RibD [Robiginitalea biformata HTCC2501] gi|88784691|gb|EAR15861.1| riboflavin biosynthesis protein RibD [Robiginitalea biformata HTCC2501] Length = 350 Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 58/153 (37%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 MK +M ++ +NA R P VGA+ + II HAE+ Sbjct: 1 MKIQEKYMLRCIQIGRNALGR-SAPNPMVGALLTHGDTIIGSGY--TSAFGGP--HAEVN 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AIR LP+ LYVTLEPC C I + IRR+ G +P Sbjct: 56 AIRSVA---DPGKLPDSTLYVTLEPCCHHGKTPPCTDRIIESGIRRVVVGLPDPHDKVAG 112 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A C ++ G++ R+ + F Sbjct: 113 QGIAQLREAGC----QVEVGVAADACREHHKRF 141 >gi|297745271|emb|CBI40351.3| unnamed protein product [Vitis vinifera] Length = 348 Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 56/145 (38%), Gaps = 21/145 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M +E A+ A + P VG V V + K++ + K H E+ A+R + Sbjct: 1 MRRCVELARKAIGCTSPNPMVGCVIVKDGKVVGEGFH----PKAGQPHGEVFALRDAGDL 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YV+LEPC C A+ A+++++ G +P G Sbjct: 57 AEN-----ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVIGMVDPNPIVASKGVDRLRD 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ + E+ +++ + + Sbjct: 112 AG----IEVTVAVEEELCKKLNEAY 132 >gi|325962810|ref|YP_004240716.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans Sphe3] gi|323468897|gb|ADX72582.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans Sphe3] Length = 161 Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 45/95 (47%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++ A+E A P GA+ V + + NR D TAHAE++AIR Sbjct: 12 KYLEQAVELATRNVSEGGGPFGALVVTPDGRVHEGVNRVTRDNDPTAHAEVVAIRAAAAA 71 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + L LY + EPC +C A+ ARI R+Y+ Sbjct: 72 TANYDLHGAVLYASCEPCPLCLASALWARIDRVYF 106 >gi|187924612|ref|YP_001896254.1| CMP/dCMP deaminase zinc-binding [Burkholderia phytofirmans PsJN] gi|187715806|gb|ACD17030.1| CMP/dCMP deaminase zinc-binding [Burkholderia phytofirmans PsJN] Length = 180 Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 52/137 (37%), Gaps = 16/137 (11%) Query: 13 EEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 A+ A L P GAV V ++ ++ GN D HAE + R+ + E Sbjct: 37 RVAERATLLGHHPFGAVLVGPDQETVLMEQGNV-----DTVNHAESVLARVAALNFTPEY 91 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-GGGIE--------NGTQFYTLAT 121 L LY ++EPC MCA + A I R+ +G + + + Y Sbjct: 92 LWSCTLYTSVEPCCMCAGTMYWANIGRVVFGMTEKRLLEATGDHAENPTMSVDCRYVFDH 151 Query: 122 CHHSPEIYPGISEQRSR 138 C E+ + E + Sbjct: 152 CQKPVEVIGPVPEVEAE 168 >gi|153216165|ref|ZP_01950304.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 1587] gi|124114423|gb|EAY33243.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 1587] Length = 367 Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 64 ASELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + + F K Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146 >gi|289209046|ref|YP_003461112.1| riboflavin biosynthesis protein RibD [Thioalkalivibrio sp. K90mix] gi|288944677|gb|ADC72376.1| riboflavin biosynthesis protein RibD [Thioalkalivibrio sp. K90mix] Length = 396 Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 55/150 (36%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M+ ALE A + P VG V V +++ + +HAE+ A+ Sbjct: 11 EDRRHMARALELADLGRFSADPNPRVGCVLVREGEVVGEGLHWRAGE----SHAEVNAL- 65 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + E +YVTLEPC C A+ A + R+ +P G Sbjct: 66 ----RAAGEAARGATVYVTLEPCSHHGRTPPCTEALIQAGVARVVIAMQDPNPQVCGGGM 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ E +R + F Sbjct: 122 EALRAAG----IEVETGVLEAEARALNPGF 147 >gi|197119395|ref|YP_002139822.1| bifunctional 2, 5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone deaminase/5-amino-6-(5'-phosphoribosylamino)uracil reductase [Geobacter bemidjiensis Bem] gi|197088755|gb|ACH40026.1| 2,5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone deaminase and 5-amino-6-(5'-phosphoribosylamino)uracil reductase [Geobacter bemidjiensis Bem] Length = 369 Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 60/151 (39%), Gaps = 21/151 (13%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M AL EA+ + VG V V N +++ + K T HAE+ A+ Sbjct: 5 HLKMMRLALAEARKGIGKTAPNPAVGCVIVRNGEVVGTGWH----KKAGTPHAEVHAL-- 58 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + + D YVTLEPC CA A+ AR+ R++ +P G Q Sbjct: 59 ---KAAGDKAAGADAYVTLEPCSHFGKTPPCAKALIEARVARVFVAMVDPNPLVSGRGIQ 115 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A + G+ ++ SR++ F K Sbjct: 116 MLKDAG----IAVEVGLLKEESRELNLPFIK 142 >gi|126660826|ref|ZP_01731920.1| riboflavin biosynthesis protein [Cyanothece sp. CCY0110] gi|126617877|gb|EAZ88652.1| riboflavin biosynthesis protein [Cyanothece sp. CCY0110] Length = 364 Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 51/149 (34%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M L A+ P VGAV V + KII + HAE+ A+R Sbjct: 8 DQQMMQRCLTLARQGLGYTSPNPLVGAVIVKDGKIIGEGFHPKAGE----PHAEVFALRE 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +YV LEPC C A+ A++ R+ G +P G Sbjct: 64 AGEKA-----VGGTVYVNLEPCNHYGRTPPCTEALISAKVARVVVGMVDPNPLVSGKGIA 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E ++ + F Sbjct: 119 RLQEAG----IEVTVGVEEAACLRLNEAF 143 >gi|170680144|ref|YP_001742551.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli SMS-3-5] gi|300937023|ref|ZP_07151889.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 21-1] gi|170517862|gb|ACB16040.1| riboflavin biosynthesis protein RibD [Escherichia coli SMS-3-5] gi|300457854|gb|EFK21347.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 21-1] Length = 367 Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + + + ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGETVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|308180337|ref|YP_003924465.1| Pyrimidine reductase, riboflavin biosynthesis [Lactobacillus plantarum subsp. plantarum ST-III] gi|308045828|gb|ADN98371.1| Pyrimidine reductase, riboflavin biosynthesis [Lactobacillus plantarum subsp. plantarum ST-III] Length = 355 Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 20/142 (14%) Query: 7 FMSCALEEAQNAALRN-EIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+++A+ A + + P VGAV V + ++++ + HAE+ +R Sbjct: 5 FMQMAIDQAKLAGVATYQNPQVGAVLVKDGHVLAQGYHHYFGGD----HAEVDVLRQ--- 57 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 ++ E L+VTLEPC C+A I A IR++ G +P G Q+ Sbjct: 58 -VTPEQARGATLFVTLEPCSHYGKTPPCSARIVAAGIRQVVIGQLDPHPIVGGKGRQYL- 115 Query: 119 LATCHHSPEIYPGISEQRSRQI 140 +H ++ G + R + Sbjct: 116 ---LNHGVDVVTGCLTDKVRAL 134 >gi|254428944|ref|ZP_05042651.1| riboflavin biosynthesis protein RibD [Alcanivorax sp. DG881] gi|196195113|gb|EDX90072.1| riboflavin biosynthesis protein RibD [Alcanivorax sp. DG881] Length = 387 Score = 96.1 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FMS AL+ A++ + P VG V V ++ + HAE A+ Sbjct: 7 DHQFMSRALQLARHGLYTTDPNPRVGCVLVRGGAVVGEGFHARAGEL----HAERHALAA 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC+ CA A+ A + R+ +P G Q Sbjct: 63 AG-----DRAQGATAYVTLEPCSHTGRTGPCADALVEAGVARVVAAMEDPNPQVAGQGLQ 117 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E ++R + F Sbjct: 118 RLADAG----IAVASGLLETQARDLNPGFIAR 145 >gi|254507822|ref|ZP_05119952.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus 16] gi|219549195|gb|EED26190.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus 16] Length = 368 Score = 96.1 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 54/159 (33%), Gaps = 31/159 (19%) Query: 2 KKGNVFMSCALEEAQNAALRNEI------P-VGAVAVLNNKIISRAGNRNRELKDVTAHA 54 + MS A+ A+ I P VG V N I+ + HA Sbjct: 6 ETDFNMMSRAIWLAK-----GGIYTTAPNPNVGCVITQNGDIVGEGFHYRAGE----PHA 56 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108 E+ A+RM YVTLEPC CA + A++ ++ +P Sbjct: 57 EVHALRMAGDKS-----VGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMQDPNPQ 111 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G Q A E+ G+ EQ + + F K Sbjct: 112 VAGRGIQMLRDAG----IEVEVGLLEQDAIALNPSFIKR 146 >gi|221068442|ref|ZP_03544547.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] gi|220713465|gb|EED68833.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1] Length = 170 Score = 96.1 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 53/142 (37%), Gaps = 16/142 (11%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A + AQ A P GAV V ++ ++ N D HAE RM Sbjct: 22 LRRAQDVAQRATQMGHHPFGAVLVGPDQETVLMEQCN-----IDTVNHAESTLARMAATN 76 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGGIE-----NGTQF 116 + E L LY +EPC MCA A I R+ +G + + G + + Sbjct: 77 YTAEFLWGCTLYTNVEPCCMCAGTAYWANIGRIVFGMTEHRLLECTGSHGENPTMSVSSR 136 Query: 117 YTLATCHHSPEIYPGISEQRSR 138 Y C + E+ + E + Sbjct: 137 YVFDHCQKAVELIGPVPEMEAE 158 >gi|300767117|ref|ZP_07077029.1| riboflavin biosynthesis protein RibD [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494936|gb|EFK30092.1| riboflavin biosynthesis protein RibD [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 355 Score = 96.1 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 20/142 (14%) Query: 7 FMSCALEEAQNAALRN-EIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+++A+ A + + P VGAV V + ++++ + HAE+ +R Sbjct: 5 FMQMAIDQAKLAGVATYQNPQVGAVLVKDGHVLAQGYHHYFGGD----HAEVDVLRQ--- 57 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 ++ E L+VTLEPC C+A I A IR++ G +P G Q+ Sbjct: 58 -VTPEQARGATLFVTLEPCSHYGKTPPCSARIVAAGIRQVVIGQLDPHPIVGGKGRQYL- 115 Query: 119 LATCHHSPEIYPGISEQRSRQI 140 +H ++ G + R + Sbjct: 116 ---LNHGVDVVTGCLTDKVRAL 134 >gi|256821696|ref|YP_003145659.1| riboflavin biosynthesis protein RibD [Kangiella koreensis DSM 16069] gi|256795235|gb|ACV25891.1| riboflavin biosynthesis protein RibD [Kangiella koreensis DSM 16069] Length = 372 Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 57/153 (37%), Gaps = 21/153 (13%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + +M+ A++ A R VG V V +N II + K AHAEI A+ Sbjct: 6 QDSSYMARAIQLAPRGWFTTRTNPRVGCVLVKDNIIIGEGWH----EKPGFAHAEINALN 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 E YVTLEPC CA A+ A + R+ +P G Sbjct: 62 HAG-----ESAKGATAYVTLEPCAHHGKTGPCAEALVEAGVARVVAAMLDPNPLVAGKGM 116 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + A + G+ + ++ + F K Sbjct: 117 KILEKAG----IKTEYGLMQAQAETLNPGFIKR 145 >gi|296133286|ref|YP_003640533.1| riboflavin biosynthesis protein RibD [Thermincola sp. JR] gi|296031864|gb|ADG82632.1| riboflavin biosynthesis protein RibD [Thermincola potens JR] Length = 385 Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 42/156 (26%), Positives = 66/156 (42%), Gaps = 25/156 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 +K +M ALE A A R P VGAV V + ++I + + K T HAE+ Sbjct: 2 IKTDVKYMRMALELAAKA--RGNTSPNPMVGAVIVKDGRVIGKGYHM----KAGTPHAEV 55 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+R + +YVTLEPC C+ A+ A + R+ +P Sbjct: 56 HALREAGELS-----RGATMYVTLEPCSHYGRTPPCSKAVIAAGVARVVVAMEDPNPLVS 110 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G Q A ++ G+ E+ +R++ + F K Sbjct: 111 GQGIQQMREAG----IQVEVGLMEKEARELNEVFIK 142 >gi|148244868|ref|YP_001219562.1| bifunctional riboflavin biosynthesis protein RibD [Candidatus Vesicomyosocius okutanii HA] gi|146326695|dbj|BAF61838.1| bifunctional riboflavin biosynthesis protein RibD [Candidatus Vesicomyosocius okutanii HA] Length = 349 Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 23/149 (15%) Query: 8 MSCALEEA---QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M+ A++ A + N + VG V V ++KII++ + + AH EI A++ Sbjct: 13 MTIAIKLALQGRYGVKSNPM-VGCVIVKHSKIIAKGYHESFGQ----AHGEINALQQ--- 64 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LYVTLEPC CA AI + ++++ +P G Sbjct: 65 --INYKAHGATLYVTLEPCSHQGKTPSCAQAIINSGVKKVIIAMLDPNPLVNGKGVVMLK 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ + + + Q F K Sbjct: 123 YAG----IEVKIGLLKNDASILNQGFIKR 147 >gi|331651348|ref|ZP_08352373.1| riboflavin biosynthesis protein RibD [Escherichia coli M718] gi|331051089|gb|EGI23141.1| riboflavin biosynthesis protein RibD [Escherichia coli M718] Length = 367 Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QEEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143 >gi|291287235|ref|YP_003504051.1| riboflavin biosynthesis protein RibD [Denitrovibrio acetiphilus DSM 12809] gi|290884395|gb|ADD68095.1| riboflavin biosynthesis protein RibD [Denitrovibrio acetiphilus DSM 12809] Length = 387 Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 39/145 (26%), Positives = 57/145 (39%), Gaps = 21/145 (14%) Query: 8 MSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M + A + VGA+ ++I+SR + HAE+ AI Sbjct: 12 MQECAQLALLGKGYTKTNPVVGAIVANQSEILSRGWHMAYGG----PHAEVNAIDS---- 63 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +DLYVTLEPC C I + IRR++ G +P G ++ Sbjct: 64 -CPVSTEGLDLYVTLEPCSHSGKTPPCVEKIVKSGIRRVFIGVVDPNPLVAGKGVEYLK- 121 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 +H E+Y G E II+DF Sbjct: 122 ---NHGVEVYVGYMEDLCASIIEDF 143 >gi|17227578|ref|NP_484126.1| riboflavin biosynthesis protein [Nostoc sp. PCC 7120] gi|17135060|dbj|BAB77606.1| riboflavin biosynthesis protein [Nostoc sp. PCC 7120] Length = 396 Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 55/145 (37%), Gaps = 21/145 (14%) Query: 8 MSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M LE A+ A R P VGAV V + +I+ + HAE+ A+R + Sbjct: 42 MQRCLELARRALGRTSPNPLVGAVVVKDGEIVGEGFHPRAGE----PHAEVFALRAAGEL 97 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +YV LEPC C+ A+ A + ++ G +P G Sbjct: 98 A-----RGATVYVNLEPCNHYGRTPPCSEALIAAGVAKVVVGMVDPNPLVGGGGIARLRG 152 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ +Q+ + F Sbjct: 153 AG----VEVLVGVEMAACQQLNEGF 173 >gi|172038173|ref|YP_001804674.1| riboflavin biosynthesis protein [Cyanothece sp. ATCC 51142] gi|171699627|gb|ACB52608.1| riboflavin biosynthesis protein [Cyanothece sp. ATCC 51142] Length = 364 Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 50/149 (33%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M L A+ P VGAV V KII + HAE+ A+R Sbjct: 8 DQQMMQRCLTLARRGLGYTSPNPLVGAVIVKEGKIIGEGFHLKAGE----PHAEVFALRE 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +YV LEPC C A+ A++ R+ G +P G Sbjct: 64 AGEKA-----VGGTVYVNLEPCNHYGRTPPCTEALISAKVARVVVGMVDPNPLVSGKGIA 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E ++ + F Sbjct: 119 RLQEAG----IEVTVGVEEAACLRLNEAF 143 >gi|307822590|ref|ZP_07652821.1| CMP/dCMP deaminase zinc-binding [Methylobacter tundripaludum SV96] gi|307736194|gb|EFO07040.1| CMP/dCMP deaminase zinc-binding [Methylobacter tundripaludum SV96] Length = 150 Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 13/141 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 ++ A EAQ +PVGA + ++ R NR + D + H E A R R Sbjct: 7 LAVAFAEAQAGFDEGGVPVGAALFDAHGNLLGRGRNRRVQDNDPSIHGETDAFRKAGR-- 64 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 Q + L TL PC C+ I I + G S G + + A H Sbjct: 65 -QTNYRDKILVTTLAPCWYCSGLIRQFNIGTVVVGESVNFEGHL----DWLKDAGV-HIV 118 Query: 127 EIYPGISEQRSRQIIQDFFKE 147 E+ ++ +++ F ++ Sbjct: 119 EM----NDADCIALMRRFIEQ 135 >gi|70733030|ref|YP_262803.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas fluorescens Pf-5] gi|68347329|gb|AAY94935.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas fluorescens Pf-5] Length = 169 Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 62/158 (39%), Gaps = 19/158 (12%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRE-LKDVTAHAEILAIRM 61 + +++ A+ A R P A+ + K+I+ AGN + D T HAE+ A + Sbjct: 16 DLHLLRQSIQLAEEAKARGRHPFAALVADRDGKVIASAGNNSMPPEGDPTQHAELAAAAL 75 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-------------NPKGG 108 + LS + L LY + EPC MCA AI I R+ Y S NP Sbjct: 76 AAKRLSPQALAGCTLYTSAEPCCMCAGAIYWTGIGRVVYALSEHELLELTGDHPENPTF- 134 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + A ++ + E + + F+K Sbjct: 135 ---SLPCREVFARGQRQIPVFGPMLESEAALAHKGFWK 169 >gi|78186602|ref|YP_374645.1| riboflavin biosynthesis protein RibD [Chlorobium luteolum DSM 273] gi|78166504|gb|ABB23602.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Chlorobium luteolum DSM 273] Length = 366 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 23/153 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 + M+ +E A A + P VG++ V + +I + + HAE+ Sbjct: 4 EADACHMARCIELALQGA--GSVSPNPMVGSLIVCDGSVIGEGYHM----QCGGPHAEVN 57 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AI + +L LYV LEPC C+ I I R+ G +P Sbjct: 58 AI---AAVSDPSLLSRSTLYVNLEPCSHFGRTPPCSDLIIEKMIPRVVVGCRDPNPKVAG 114 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + ++Y G+ E ++ + F Sbjct: 115 RGIMRLRDSG----VDVYEGVLEAECLRLNEAF 143 >gi|262166346|ref|ZP_06034083.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio mimicus VM223] gi|262026062|gb|EEY44730.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio mimicus VM223] Length = 367 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 53/152 (34%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 64 AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQ 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + F K Sbjct: 119 MLRDAG----IEVQIGLLEADARALNSGFLKR 146 >gi|238024083|ref|YP_002908315.1| putative deaminase [Burkholderia glumae BGR1] gi|55509025|gb|AAV52810.1| putative deaminase [Burkholderia glumae BGR1] gi|148562469|gb|ABQ88346.1| putative deaminase [Burkholderia glumae] gi|237878748|gb|ACR31080.1| Putative deaminase [Burkholderia glumae BGR1] Length = 384 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 52/150 (34%), Gaps = 20/150 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ ALE A P VG V V + +I + D HAE+ A++ Sbjct: 20 DRAWMAKALELAARGLYTT-TPNPRVGCVIVKHGMLIGEGYTQP-AGHD---HAEVRAMK 74 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 L YVTLEPC CA + A I + +P G Sbjct: 75 DA--RSRGHELRGATAYVTLEPCSHYGRTPPCAKGLVEAGIATVVAAMEDPNPQVSGRGY 132 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E +R++ F Sbjct: 133 AMLREAG----IEVRGGVLEDEARELNIGF 158 >gi|254226773|ref|ZP_04920347.1| riboflavin biosynthesis protein RibD [Vibrio cholerae V51] gi|125620711|gb|EAZ49071.1| riboflavin biosynthesis protein RibD [Vibrio cholerae V51] Length = 367 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 64 AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ + +R + + F K Sbjct: 119 MLRDAG----IEVEVGLLDADARALNRGFLKR 146 >gi|330815405|ref|YP_004359110.1| Putative deaminase [Burkholderia gladioli BSR3] gi|327367798|gb|AEA59154.1| Putative deaminase [Burkholderia gladioli BSR3] Length = 384 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 55/150 (36%), Gaps = 20/150 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ ALE A P VG V V + +I + D HAE+ A++ Sbjct: 20 DRAWMARALELAARGLYTT-TPNPRVGCVIVKHGILIGEGYTQP-AGHD---HAEVRAMK 74 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 R E L YVTLEPC CA + A I + +P G Sbjct: 75 DA-RARGHE-LRGATAYVTLEPCSHYGRTPPCAKGLVEAGIATVVAAMEDPNPQVSGRGY 132 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ +R++ F Sbjct: 133 AMLREAG----IEVRGGVLEEEARELNIGF 158 >gi|195640478|gb|ACG39707.1| riboflavin biosynthesis protein ribD [Zea mays] Length = 392 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 58/150 (38%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M +E A+ AA P VG V V + +++ + K HAE+ A+R Sbjct: 47 DDAHYMRRCVELARKAAGHTSPNPMVGCVIVRDGRVVGEGFH----PKAGQPHAEVFALR 102 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YV+LEPC C A+ A+++ + G ++P G Sbjct: 103 DAGNLAEN-----ATAYVSLEPCNHYGRTPPCTEALINAKVKEVVVGMTDPNPIVASKGI 157 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A + G+ E R++ + + Sbjct: 158 EKLQGAG----ISVRVGVEEALCRKLNEAY 183 >gi|212275115|ref|NP_001130669.1| hypothetical protein LOC100191772 [Zea mays] gi|194689788|gb|ACF78978.1| unknown [Zea mays] Length = 392 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 58/150 (38%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M +E A+ AA P VG V V + +++ + K HAE+ A+R Sbjct: 47 DDAHYMRRCVELARKAAGHTSPNPMVGCVIVRDGRVVGEGFH----PKAGQPHAEVFALR 102 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YV+LEPC C A+ A+++ + G ++P G Sbjct: 103 DAGNLAEN-----ATAYVSLEPCNHYGRTPPCTEALINAKVKEVVVGMTDPNPIVASKGI 157 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A + G+ E R++ + + Sbjct: 158 EKLQGAG----ISVRVGVEEALCRKLNEAY 183 >gi|186473011|ref|YP_001860353.1| CMP/dCMP deaminase zinc-binding [Burkholderia phymatum STM815] gi|184195343|gb|ACC73307.1| CMP/dCMP deaminase zinc-binding [Burkholderia phymatum STM815] Length = 180 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 17/146 (11%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A A+ A L P GA+ V ++ ++ GN D HAE + RM Sbjct: 30 LRHASIVAERATLMGHHPFGAILVGPDQESVLIEQGNV-----DTVNHAESVLARMAALN 84 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-GGGIENGTQ--------F 116 + + L LY T+EPC MCA A I R+ +G + + N T Sbjct: 85 FTPQYLWSCTLYTTVEPCCMCAGTAYWANIGRVVFGMTEERLLQATGNHTDNPTMSVPSR 144 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQ 142 Y C ++ ++E + +I+Q Sbjct: 145 YVFDHCQKQVDLIGPVTEVEA-EIMQ 169 >gi|215485495|ref|YP_002327926.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli O127:H6 str. E2348/69] gi|312964564|ref|ZP_07778820.1| riboflavin biosynthesis protein RibD [Escherichia coli 2362-75] gi|215263567|emb|CAS07897.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli O127:H6 str. E2348/69] gi|312290798|gb|EFR18675.1| riboflavin biosynthesis protein RibD [Escherichia coli 2362-75] Length = 367 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNNGFLKRMR 143 >gi|317509323|ref|ZP_07966943.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Segniliparus rugosus ATCC BAA-974] gi|316252379|gb|EFV11829.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Segniliparus rugosus ATCC BAA-974] Length = 148 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 15/139 (10%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69 A+ EA+ +P+GA + K++ R NR + D HAE A R R Q Sbjct: 10 AVAEARAGLAEGGVPIGAALFTRDGKLLGRGHNRRVQWDDPAIHAETDAFRAAGR---QR 66 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 + + TL PC C+ + I + G ++ GG + + E+ Sbjct: 67 DYRDTVMVTTLSPCWYCSGLVRQFNIGAVIIGEASNFHGGHDWLAEL--------GVEVA 118 Query: 130 PGISEQ-RSRQIIQDFFKE 147 + + ++ F + Sbjct: 119 --VLDDPDCTAMLGSFIEA 135 >gi|192291382|ref|YP_001991987.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris TIE-1] gi|192285131|gb|ACF01512.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris TIE-1] Length = 389 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 48/144 (33%), Gaps = 21/144 (14%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL + R VGAV V + I+ R HAE+ A+R Sbjct: 27 DRRFMQLALALGRRGQGRTAPNPAVGAVLVKDGVIVGRGW----TQDGGRPHAEVEALRR 82 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 LYVTLEPC CA A+ A I R+ +P G Sbjct: 83 AGDAA-----RGATLYVTLEPCSHHGRTPPCADAVIAAGIARVVSAIEDPNPLVAGQGHA 137 Query: 116 FYTLATCHHSPEIYPGISEQRSRQ 139 A + G+ + + + Sbjct: 138 RLRAAG----IAVEIGVCAEEAAR 157 >gi|253699856|ref|YP_003021045.1| riboflavin biosynthesis protein RibD [Geobacter sp. M21] gi|251774706|gb|ACT17287.1| riboflavin biosynthesis protein RibD [Geobacter sp. M21] Length = 369 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 61/155 (39%), Gaps = 22/155 (14%) Query: 1 MKK-GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M M AL EA+ + VG V V + +++ + K T HAE+ Sbjct: 1 MSDLHLKMMRLALCEARKGVGKTAPNPAVGCVIVRDGEVVGTGWH----KKAGTPHAEVH 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ + E D YVTLEPC CA A+ A++ R++ +P Sbjct: 57 AL-----KAAGEKAAGADAYVTLEPCSHFGKTPPCAKALIEAKVARVFVAMVDPNPLVSG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G Q A + G+ E+ SR++ F K Sbjct: 112 KGIQMLKDAG----IAVEVGLLEEESRELNLPFIK 142 >gi|329943233|ref|ZP_08292007.1| riboflavin biosynthesis protein RibD [Chlamydophila psittaci Cal10] gi|332287812|ref|YP_004422713.1| riboflavin biosynthesis protein [Chlamydophila psittaci 6BC] gi|313848384|emb|CBY17388.1| riboflavin biosynthesis protein RibD [Chlamydophila psittaci RD1] gi|325507267|gb|ADZ18905.1| riboflavin biosynthesis protein [Chlamydophila psittaci 6BC] gi|328814780|gb|EGF84770.1| riboflavin biosynthesis protein RibD [Chlamydophila psittaci Cal10] gi|328915072|gb|AEB55905.1| riboflavin biosynthesis protein RibD [Chlamydophila psittaci 6BC] Length = 368 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 21/155 (13%) Query: 2 KKGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ FM A+E + A P VG V V N +II + + HAE AI Sbjct: 6 EQQLFFMRRAIELGEKGAFSSQPNPWVGCVIVKNGRIIGEGYH--EKAGQP--HAEEKAI 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R E + ++YVTLEPC C + ++ +Y +P G Sbjct: 62 RSA-----SESIEGSEVYVTLEPCCHYGNTPPCVNLLIKYKVAAVYVALLDPDSRVSGRG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 A +Y G+ ++ + + ++ + +R Sbjct: 117 IASLRKAG----ICVYEGLGKEEAERSLKSYLYQR 147 >gi|91784309|ref|YP_559515.1| putative cytidine/deoxycytidylate deaminase family protein [Burkholderia xenovorans LB400] gi|91688263|gb|ABE31463.1| Putative cytidine/deoxycytidylate deaminase family protein [Burkholderia xenovorans LB400] Length = 180 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 53/137 (38%), Gaps = 16/137 (11%) Query: 13 EEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 A+ A L P GAV V ++ ++ GN D HAE + R+ + Sbjct: 37 RVAERATLLGHHPFGAVLVGPDQETVLMEQGNV-----DTVNHAESVLARVAALNFTPAY 91 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGG-----IENGTQFYTLAT 121 L LY ++EPC MCA + A I R+ +G + + G + Y Sbjct: 92 LWSCTLYTSVEPCCMCAGTMYWANIGRVVFGMTEKRLLEATGAHAENPTMSVDCRYVFDH 151 Query: 122 CHHSPEIYPGISEQRSR 138 C E+ ++E + Sbjct: 152 CQKPVEVIGPVAEVEAE 168 >gi|284052639|ref|ZP_06382849.1| CMP/dCMP deaminase zinc-binding protein [Arthrospira platensis str. Paraca] Length = 75 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 36/72 (50%) Query: 78 VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 VTLEPC MCA AI ARI L YG +PK G I +H + GI E Sbjct: 1 VTLEPCPMCAGAILQARIGLLVYGVDDPKTGSIRTVCNLPDSPASYHRLPVLGGILESSC 60 Query: 138 RQIIQDFFKERR 149 RQ +Q +F + R Sbjct: 61 RQQLQSWFAQHR 72 >gi|258592177|emb|CBE68486.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase [NC10 bacterium 'Dutch sediment'] Length = 372 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 39/152 (25%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM AL A+ R P VGAV V + +I+ + HAE++A+ Sbjct: 5 DDERFMRHALVLAEKGRGRTSPNPMVGAVVVQHGRIVGEGYHAQAGK----PHAEVVALE 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 DLYVTLEPC C I A IRR+ +P G Sbjct: 61 YAGGAARN-----ADLYVTLEPCGHYGRTPPCTDRIIQAGIRRVVVPTIDPNPLVSGRGV 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 Q A + G+ + + + F K Sbjct: 116 QSLRDAG----VIVDLGLRSADATALNEAFIK 143 >gi|163788599|ref|ZP_02183044.1| riboflavin biosynthesis protein RibD [Flavobacteriales bacterium ALC-1] gi|159875836|gb|EDP69895.1| riboflavin biosynthesis protein RibD [Flavobacteriales bacterium ALC-1] Length = 323 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 17/126 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VGAV V + KIIS HAE+ AI I + +L + LYVTLEPC Sbjct: 17 VGAVIVHDKKIISEGFTSTYGGN----HAEVNAINS---IKDKSLLEKSTLYVTLEPCSH 69 Query: 84 ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C+ I +I + G + G + C ++ G+ E + Sbjct: 70 HGKTPPCSDLILKHKIPEVIIGCVDDNPEVAGKGIAKLKASGC----KVTVGVLEAECKT 125 Query: 140 IIQDFF 145 + FF Sbjct: 126 HHKRFF 131 >gi|332672108|ref|YP_004455116.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas fimi ATCC 484] gi|332341146|gb|AEE47729.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas fimi ATCC 484] Length = 161 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 43/113 (38%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + LE A+ A + P G+V V + A + D T H E+ R Sbjct: 7 DLAHLRRCLELAREALDDGDEPFGSVLVDAGGTVLLADRNRVKDGDGTRHPELEIARWAA 66 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L E +Y + E C MCAAA A + R+ Y AS+ + G Sbjct: 67 AHLPVEERAGCTVYTSGEHCPMCAAAHGWAGLGRIVYVASSGQLAAWRRGWGL 119 >gi|258620986|ref|ZP_05716020.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio mimicus VM573] gi|258586374|gb|EEW11089.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio mimicus VM573] Length = 367 Score = 95.4 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 53/152 (34%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 64 AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQ 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + F K Sbjct: 119 MLRDAG----IEVQIGLLEADARALNSGFLKR 146 >gi|189219671|ref|YP_001940312.1| Pyrimidine deaminase and pyrimidine reductase [Methylacidiphilum infernorum V4] gi|189186529|gb|ACD83714.1| Pyrimidine deaminase and pyrimidine reductase [Methylacidiphilum infernorum V4] Length = 376 Score = 95.4 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 54/151 (35%), Gaps = 19/151 (12%) Query: 3 KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M AL+ A VGAV V +I R +R AHAEI AI Sbjct: 25 EDRYWMKEALKWALLGEGLTSPNPAVGAVLVKEGTLIGRGYHRKAGQ----AHAEIEAIE 80 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + E + LYVTLEPC C I +I R+ + +P Sbjct: 81 DAKKR--GESVAGSTLYVTLEPCSSWGKTPPCTERIVKEKISRVVASSPDPNPRNKPRAV 138 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + S EI + + + + F+ Sbjct: 139 ELLPSLGVDFSWEIL-----EEALFLNRGFY 164 >gi|117923484|ref|YP_864101.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Magnetococcus sp. MC-1] gi|117607240|gb|ABK42695.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Magnetococcus sp. MC-1] Length = 376 Score = 95.4 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 38/148 (25%), Positives = 51/148 (34%), Gaps = 24/148 (16%) Query: 3 KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 K +M AL A R P VG V V ++II R +R HAE+ A+ Sbjct: 8 KDRAYMDHALRLAARGLGRT-RPNPTVGCVIVKEDRIIGRGWHRKAGG----PHAEVEAL 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 RM YVTLEPC C + A IRR+ +P G Sbjct: 63 RMAGEAA-----RGATAYVTLEPCSHHGRTPPCCEGLIKAGIRRVVAAMEDPNPLVSGQG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQII 141 Q A + + Q++ Sbjct: 118 FQRLKQAGVVVQVG-----VREEAAQML 140 >gi|218668008|ref|YP_002424804.1| riboflavin biosynthesis protein RibD [Acidithiobacillus ferrooxidans ATCC 23270] gi|218520221|gb|ACK80807.1| riboflavin biosynthesis protein RibD [Acidithiobacillus ferrooxidans ATCC 23270] Length = 366 Score = 95.4 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 57/156 (36%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ FMS AL A+ + P VGAV V + ++I R + HAE+LA+ Sbjct: 4 EQDLAFMSEALVLAEQGLYSAHPNPCVGAVLVKDGRVIGRGAHLQAGE----PHAEVLAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + YVTLEPC CA A+ A I R+ +P G Sbjct: 60 KEAGAAARGAT-----AYVTLEPCSHYGRTPPCADALIAAGIARVVIAMRDPNPLVAGRG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + A G E + + F + R Sbjct: 115 VERLRAAG----VVAEEGCLEAAAEALNPGFLRRMR 146 >gi|91792826|ref|YP_562477.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Shewanella denitrificans OS217] gi|91714828|gb|ABE54754.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Shewanella denitrificans OS217] Length = 142 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 55/146 (37%), Gaps = 21/146 (14%) Query: 5 NVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M ALE ++ A PVG V V + +++ + + HAE+ A+ Sbjct: 3 EEYMLIALELSKKALPHCLPNPPVGCVLVKDGQVVGQGFTQVIGGN----HAEVEALNS- 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L V YVTLEPC CAA ++ + ++ L +P G Sbjct: 58 ----YTGDLAGVTAYVTLEPCSFVGRTPACAARLAHSGLKHLVLAMLDPDSRNNGKGLAM 113 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQ 142 A + + GI E ++ + Sbjct: 114 LQHAGIN----VELGICEAQASAFLS 135 >gi|70726154|ref|YP_253068.1| riboflavin specific deaminase [Staphylococcus haemolyticus JCSC1435] gi|68446878|dbj|BAE04462.1| riboflavin specific deaminase [Staphylococcus haemolyticus JCSC1435] Length = 347 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 24/150 (16%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ AQ + I PVGAV V N +I+ + + K HAE+ A+ M + Sbjct: 4 FMEYAIQLAQMVKGQTGINPPVGAVVVNNGRIVGLGAHLKQGEK----HAEVQALDMAGK 59 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +Y++LEPC C I + ++ Y + + Sbjct: 60 EA-----KGGIIYISLEPCTHFGSTPPCVNKIIEFGLSKVIYAVKDTTLPSEGDA--ILE 112 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148 A + + + + +DFFK + Sbjct: 113 QAGIDVEYQ-----YSEEAAALYKDFFKAK 137 >gi|298490230|ref|YP_003720407.1| riboflavin biosynthesis protein RibD ['Nostoc azollae' 0708] gi|298232148|gb|ADI63284.1| riboflavin biosynthesis protein RibD ['Nostoc azollae' 0708] Length = 375 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 57/149 (38%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ M L+ A+ A R P VGAV V + +I+ + HAE+ A+R Sbjct: 17 DSLMMQWCLQLARRALGRTSPNPLVGAVVVQDREIVGEGFHPRAGE----PHAEVFALRA 72 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +YV+LEPC C+ + A I ++ G +P G Sbjct: 73 AGEKAH-----GATIYVSLEPCNHYGRTPPCSEGLIAAGISKVVVGMVDPNPLVAGGGIA 127 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E RQ+ + F Sbjct: 128 RLRAAG----IEVLVGVEEAACRQLNEGF 152 >gi|254421232|ref|ZP_05034950.1| riboflavin biosynthesis protein RibD [Synechococcus sp. PCC 7335] gi|196188721|gb|EDX83685.1| riboflavin biosynthesis protein RibD [Synechococcus sp. PCC 7335] Length = 363 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 24/151 (15%) Query: 3 KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M E A AA P VG++ + + +I+ + HAEI A+ Sbjct: 10 SDTDLMRRCCELAAQAAGHT-APNPLVGSIILRDGEIVGEGFHPKAGE----PHAEIFAL 64 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + LYV LEPC C+ A+ A IRR+ G +P G Sbjct: 65 RAA-----SDRAQGATLYVNLEPCNHKGLTPPCSEAVIKAGIRRVVIGMRDPNPKAKG-G 118 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ GI R Q+ + F Sbjct: 119 IEKLRQAG----IEVVVGIEVDRCHQLNEAF 145 >gi|212634188|ref|YP_002310713.1| riboflavin biosynthesis protein RibD [Shewanella piezotolerans WP3] gi|212555672|gb|ACJ28126.1| Riboflavin biosynthesis protein RibD [Shewanella piezotolerans WP3] Length = 373 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 21/154 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + N MS A+E AQ P VG+V V ++ I+ + HAE+ A+ Sbjct: 4 TEDNQMMSLAIELAQKGLYTTRPNPCVGSVIVKDSVIVGEGYHIRAGG----PHAEVYAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 M YVTLEPC CA A+ A + R+ ++P G Sbjct: 60 NMAGN-----DAKGATAYVTLEPCSHYGRTPPCAKALIEAGVSRVVVAVTDPNPQVSGRG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A ++ G+ ++Q+ F K Sbjct: 115 IAMLQDAG----IQVDVGLLTDAAKQVNLGFLKR 144 >gi|91784896|ref|YP_560102.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Burkholderia xenovorans LB400] gi|91688850|gb|ABE32050.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Burkholderia xenovorans LB400] Length = 389 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 51/151 (33%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + V M AL A+ + P VG V V N +I + HAEI A+ Sbjct: 4 QTDFVHMERALALARRGMYTTDPNPRVGCVLVKNGAVIGEGFTQPAGQD----HAEIRAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + L YVTLEPC C A+ A++ + +P G Sbjct: 60 KDA--RSRGHDLRGATAYVTLEPCSHFGRTPPCVNALIEAQVALVVAAMEDPNPLVSGRG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ + ++ F Sbjct: 118 LAILRDAG----IEVRCGLLANEAHELNIGF 144 >gi|39935793|ref|NP_948069.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris CGA009] gi|39649646|emb|CAE28168.1| putative riboflavin-specific deaminase / reductase [Rhodopseudomonas palustris CGA009] Length = 389 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 48/144 (33%), Gaps = 21/144 (14%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL + R VGAV V + I+ R HAE+ A+R Sbjct: 27 DRRFMQLALALGRRGQGRTAPNPAVGAVLVKDGVIVGRGW----TQDGGRPHAEVEALRR 82 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 LYVTLEPC CA A+ A I R+ +P G Sbjct: 83 AGDAA-----RGATLYVTLEPCSHHGRTPPCADAVIAAGIARVVSAIEDPNPLVAGQGHA 137 Query: 116 FYTLATCHHSPEIYPGISEQRSRQ 139 A + G+ + + + Sbjct: 138 RLRTAG----IAVEIGVCAEEAAR 157 >gi|291613122|ref|YP_003523279.1| riboflavin biosynthesis protein RibD [Sideroxydans lithotrophicus ES-1] gi|291583234|gb|ADE10892.1| riboflavin biosynthesis protein RibD [Sideroxydans lithotrophicus ES-1] Length = 363 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 54/149 (36%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M+ AL A+ VG V V ++++ + HAE+ A+R Sbjct: 5 DSQWMALALRLAEQGLYTTSPNPRVGCVLVKQHEVVGTGWHERAGE----PHAEVHALRA 60 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ A I+R+ +P G Sbjct: 61 AGKSA-----KGATAYVTLEPCSHHGRTPPCADALVAAGIKRVVAAMQDPNPQVAGQGIA 115 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + G+ E +R++ F Sbjct: 116 RLRAAGIG----VECGLMEVAARELNIGF 140 >gi|194212402|ref|XP_001914792.1| PREDICTED: similar to hCG22695 [Equus caballus] Length = 371 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 46/159 (28%) Query: 26 VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR--MGCRILSQEILP--------- 72 VGAV V +++ + + R HA ++ I + L Sbjct: 211 VGAVVVDPASDRVAATGHDCRRPAT-PLLHATMVCIDLVAQGQGRGTYDLRPHPACSFAP 269 Query: 73 -------------------------------EVDLYVTLEPCTMCAAAISLARIRRLYYG 101 DLYVT EPC MCA A+ +R++R++YG Sbjct: 270 AASAQAVRVGSVRKLDEDVDTDEDGLPYVCTGYDLYVTREPCAMCAMALVHSRVQRVFYG 329 Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 A +P G + + + +H +++ G+ E R++ Sbjct: 330 APSPD-GALGTRLRLHARPDLNHRFQVFRGVLEAACRRL 367 >gi|315186245|gb|EFU20006.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase ;5-amino-6-(5-phosphoribosylamino)uracil reductase [Spirochaeta thermophila DSM 6578] Length = 362 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 19/128 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VGAV V + +++ + L HAE+ A+ ++YVTLEPC Sbjct: 29 VGAVVVKDGRVVGEGFHERAGL----PHAEVTALSEAGGEA-----RGAEMYVTLEPCCH 79 Query: 84 ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C AI A +RR+ +P G A E+ G+ + +R Sbjct: 80 WGRTPPCTDAILKAGVRRVVVACRDPNPQVAGKGLSILAEAG----VEVEVGVLSREARW 135 Query: 140 IIQDFFKE 147 + + F Sbjct: 136 LNRGFISR 143 >gi|256004715|ref|ZP_05429691.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum DSM 2360] gi|281416820|ref|ZP_06247840.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum JW20] gi|255991308|gb|EEU01414.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum DSM 2360] gi|281408222|gb|EFB38480.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum JW20] gi|316941134|gb|ADU75168.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum DSM 1313] Length = 368 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 17/130 (13%) Query: 1 MKKGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + + FMS A++ A+ N P VGAV V + KII+ ++ +L HAE+ A Sbjct: 4 LSEKEFFMSRAIKLAKLGWGKTNPNPLVGAVVVKDGKIIAEGYHK--QLGGP--HAEVEA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +E + LYV LEPC CA I I+++ +P Sbjct: 60 FNNA-----KEDVAGGTLYVNLEPCSHYGRTPPCAQKIIDVGIKKVVAAIKDPNPKVSGR 114 Query: 113 GTQFYTLATC 122 G + A Sbjct: 115 GFEMLKNAGI 124 >gi|30248797|ref|NP_840867.1| riboflavin biosynthesis bifunctional RibD [Nitrosomonas europaea ATCC 19718] gi|30180392|emb|CAD84704.1| Riboflavin biosynthesis bifunctional RibD [Nitrosomonas europaea ATCC 19718] Length = 363 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 54/154 (35%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +MS AL A+ VG V V K++ + HAEI A+R Sbjct: 6 DYEYMSHALRLAERGLFTTSPNPRVGCVIVNGGKVVGTGWHERAGE----PHAEIHALRK 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + +YVTLEPC C A+ A + ++ ++P G + Sbjct: 62 AGDLA-----KGATVYVTLEPCSHHGRTPPCVEALIQAGVCKVVMAMNDPNPHVNGQGKE 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + A I G+ ++ ++ F R Sbjct: 117 WLQKAG----IAIQAGLLADQAERLNIGFVTRMR 146 >gi|197335179|ref|YP_002155463.1| riboflavin biosynthesis protein RibD [Vibrio fischeri MJ11] gi|197316669|gb|ACH66116.1| riboflavin biosynthesis protein RibD [Vibrio fischeri MJ11] Length = 363 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 50/145 (34%), Gaps = 21/145 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ A+ P VG V V + KI+ + HAE+ A+R + Sbjct: 2 MQKAILLAKQGIYTTAPNPNVGCVLVKDGKIVGEGAHLKAGE----PHAEVHALRQAGKE 57 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC CA + A ++++ +P G Sbjct: 58 AQ-----GATAYVTLEPCSHYGRTPPCAEGLIKAGVKKVICAMVDPNPQVAGRGLAMLNE 112 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A E G+ E +R + F Sbjct: 113 AG----IETASGLLEADARALNPHF 133 >gi|88704437|ref|ZP_01102151.1| Riboflavin biosynthesis protein ribD [Congregibacter litoralis KT71] gi|88701488|gb|EAQ98593.1| Riboflavin biosynthesis protein ribD [Congregibacter litoralis KT71] Length = 377 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 54/154 (35%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM+ AL A+ R VG V V ++ ++ + HAEI+A++ Sbjct: 14 DRQFMARALRLAERGKYWARPNPHVGCVLVRDSTVVGEGFTQPAGGD----HAEIMALKA 69 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC C A+ A + R++ G +P G Sbjct: 70 AGDAA-----RGSTAYVTLEPCAHTGRTPPCCNALIAAGVARVFVGLRDPNPKVDGGGIH 124 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 ++ G+ + + F + +R Sbjct: 125 RLQAEGL----AVHQGLMADQVEAQLAGFLQRQR 154 >gi|261417115|ref|YP_003250798.1| riboflavin biosynthesis protein RibD [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373571|gb|ACX76316.1| riboflavin biosynthesis protein RibD [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326859|gb|ADL26060.1| riboflavin biosynthesis protein RibD [Fibrobacter succinogenes subsp. succinogenes S85] Length = 421 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 21/136 (15%) Query: 7 FMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM ALE+A R VGAV V + ++ + R + +AHAE++A+R Sbjct: 8 FMQFALEQAFFAIGESRPNPAVGAVVVKDGIVVGKG----RTQRPGSAHAEVMALRDAGE 63 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + ++VTLEPC C AI A I+++Y+ S+P + Sbjct: 64 LA-----RGASIFVTLEPCCHYGRTPPCTKAIIEAGIQKVYFAHSDPNPVVHGKSRKILE 118 Query: 119 LATCHHSPEIYPGISE 134 A E++ G+ Sbjct: 119 EAG----VEVHEGVDA 130 >gi|239621600|ref|ZP_04664631.1| riboflavin biosynthesis protein RibD [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515475|gb|EEQ55342.1| riboflavin biosynthesis protein RibD [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 320 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 54/153 (35%), Gaps = 18/153 (11%) Query: 1 MKKGNVFMSCALEEA-QNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + +M+ ALE A + A N P VG V V +++I++ + HAE +A Sbjct: 33 MPQYREYMTQALELAHRGAGWVNPNPLVGTVVVRDSEILAAGYHDRYRG----PHAERMA 88 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + TLEPC C I I R+ G+ +P Sbjct: 89 FDYADEH--GIDMHGATVIDTLEPCCHVGSQPACTDLILSHGITRVVVGSIDPNPIVAGK 146 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + E+ + I + FF Sbjct: 147 GLRILEETG----VEVVYDVMRAECDAINRHFF 175 >gi|284037818|ref|YP_003387748.1| riboflavin biosynthesis protein RibD [Spirosoma linguale DSM 74] gi|283817111|gb|ADB38949.1| riboflavin biosynthesis protein RibD [Spirosoma linguale DSM 74] Length = 352 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 38/163 (23%), Positives = 60/163 (36%), Gaps = 28/163 (17%) Query: 4 GNVFMSCALEEAQNAALRNEI-P---VGAVAVLN----NKIISRAGNRNRELKDVTAHAE 55 FM ALE A R + P VG V +II ++ HAE Sbjct: 9 DERFMRRALELATLG--RGHVSPNPMVGCVITHGSGSQERIIGEGWHKRYGD----WHAE 62 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109 + A+ Q +L E +YVTLEPC CA + ++R+ +P Sbjct: 63 VNAVNSVLPEHQQ-LLSEATVYVTLEPCSHWGKTPPCADLLIERHVKRVVCCNDDPNPLV 121 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD---FFKERR 149 G A ++ G+ ++ R + FF+++R Sbjct: 122 SGQGFAKLRAAG----IQVETGVLAEQGRLLNARFFTFFEQKR 160 >gi|304413736|ref|ZP_07395180.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal) and 5-amino-6-(5-phosphoribosylamino) uracil reductase (C-terminal) [Candidatus Regiella insecticola LSR1] gi|304283827|gb|EFL92221.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal) and 5-amino-6-(5-phosphoribosylamino) uracil reductase (C-terminal) [Candidatus Regiella insecticola LSR1] Length = 381 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 52/158 (32%), Gaps = 24/158 (15%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ ALE A P VG V V KI+ + HAEI A+ Sbjct: 9 DKKYMARALELALLGRFTTAPNPNVGCVIVREGKIVGEGYHVRAGE----PHAEINALNK 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +YVTLEPC C A+ A I+R+ +P G Sbjct: 65 AKAKDEA---RNATVYVTLEPCCHTGRTPPCTDALIAAGIKRVVVAMPDPNPQVSGRGIY 121 Query: 116 FYTLATCHHSPEIYPGIS----EQRSRQIIQDFFKERR 149 A + I + ++ I + F K R Sbjct: 122 QLQQAGI-----VVDYIGSTTIKAKAEDINRGFLKRMR 154 >gi|330506583|ref|YP_004383011.1| cytosine deaminase [Methanosaeta concilii GP-6] gi|328927391|gb|AEB67193.1| cytosine deaminase [Methanosaeta concilii GP-6] Length = 154 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 12/145 (8%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 ++FM AL+EA+ + IP+GAV V +II R NR + +D HAEI +R R Sbjct: 2 DIFMQAALDEARKGSREGGIPIGAVLVEEGRIIGRGRNRRVQQRDQMMHAEIDCLRNA-R 60 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + LY TL PC MCA A+ I+++ G + + H Sbjct: 61 LTGGYH--NAVLYTTLMPCYMCAGAVVYFGIKKVVVGEARSAPAARDFMQA--------H 110 Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149 E+ + R +++++ R Sbjct: 111 GIEVVD-LDWAECRMLMEEYISMNR 134 >gi|319892826|ref|YP_004149701.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5- phosphoribosylamino)uracil reductase [Staphylococcus pseudintermedius HKU10-03] gi|317162522|gb|ADV06065.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5- phosphoribosylamino)uracil reductase [Staphylococcus pseudintermedius HKU10-03] gi|323464142|gb|ADX76295.1| riboflavin specific deaminase [Staphylococcus pseudintermedius ED99] Length = 348 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 60/157 (38%), Gaps = 33/157 (21%) Query: 5 NVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 N ++ A++ A+ P VGAV V + +II + + HAEI AI M Sbjct: 2 NHYLDYAIQLAEMTQGQTGTNPAVGAVIVKHGRIIGFGAHLKKGE----RHAEIQAIDMA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + +YV+LEPC CA I I ++ Y A + Sbjct: 58 GAK----HVKGATIYVSLEPCSHYGSTPPCAQRIIDTGIAKVVYAAKDT----------- 102 Query: 117 YTLATCHHSPEIYPGISEQ-----RSRQIIQDFFKER 148 TL H + GI + R+ Q+ F++ + Sbjct: 103 -TLQETSHDVMVQHGIEVEYRPHPRAEQLYAAFYRSK 138 >gi|254523112|ref|ZP_05135167.1| riboflavin biosynthesis protein RibD [Stenotrophomonas sp. SKA14] gi|219720703|gb|EED39228.1| riboflavin biosynthesis protein RibD [Stenotrophomonas sp. SKA14] Length = 396 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 55/149 (36%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M+ AL A+ A P VG V +++ + ++ HAE+ A+R Sbjct: 44 DHQHMANALRLAERGAYTTRPNPMVGCVIAHGERVVGQGWHQRAGG----PHAEVFALRE 99 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ A + R+ +P G Sbjct: 100 AG-----SEARGATAYVTLEPCAHYGRTPPCALALIEAGVSRVVAAMRDPFPKVDGGGFD 154 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ ++R++ + F Sbjct: 155 LLREAG----IDVSEGLMAAQARELNKGF 179 >gi|254246078|ref|ZP_04939399.1| Pyrimidine reductase [Burkholderia cenocepacia PC184] gi|124870854|gb|EAY62570.1| Pyrimidine reductase [Burkholderia cenocepacia PC184] Length = 373 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 20/154 (12%) Query: 1 MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M F M AL A P VG V V + +I + HAE+ Sbjct: 1 MFSDTDFAHMQRALALAARGMYTTAPNPRVGCVIVKDGDVIGEGFTQPAGQD----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++ + +YVTLEPC CA A+ AR+ ++ +P Sbjct: 57 QALKDA--RSRGYDVAGSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A ++ G+ + ++ F Sbjct: 115 GRGLGMLRDAG----IDVRCGLLANEAGELNIGF 144 >gi|294142852|ref|YP_003558830.1| riboflavin-specific deaminase [Shewanella violacea DSS12] gi|32562925|dbj|BAC79238.1| putative riboflavin deaminase [Shewanella violacea] gi|293329321|dbj|BAJ04052.1| riboflavin-specific deaminase, putative [Shewanella violacea DSS12] Length = 143 Score = 95.0 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 21/150 (14%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M FM AL+ +Q A + PVG V VL++++I+ + HAE+ A Sbjct: 1 MDFDKKFMLRALKLSQTALPECQPNPPVGCVLVLDDQVIAEGYTQKIGGN----HAEMEA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + V YVTLEPC CA+ + + I+R+ +P Sbjct: 57 LNA-----YDGSMGLVTAYVTLEPCSFVGRTPACASTLVKSGIKRVVVAILDPDLRNNGK 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 G Q ++ G++ + + + Sbjct: 112 GIQTLEKEG----IKVDIGVASKEVSEFLS 137 >gi|307153182|ref|YP_003888566.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822] gi|306983410|gb|ADN15291.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822] Length = 165 Score = 95.0 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 8/150 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ + + A +A RN++ V A+ ++II N + ++ HAEI+ + Sbjct: 8 EQDERMIEKVIALASDAISRNKVGVAALLACGDEIIVLDHNPFADTQNPLDHAEIVVLNK 67 Query: 62 GCR---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 SQE ++ LY TLEPC +C A S IRR+ Y A + T Sbjct: 68 AGSYLTKCSQEQKSKLTLYSTLEPCLICLLAASFVGIRRIVYAALAEDANQQGQLIKGMT 127 Query: 119 LATCHHS-----PEIYPGISEQRSRQIIQD 143 T + E+ PG+ ++ + +++ Sbjct: 128 ARTINPYLTKGEMELIPGVKREQGKALLEQ 157 >gi|325676856|ref|ZP_08156529.1| guanine deaminase [Rhodococcus equi ATCC 33707] gi|325552404|gb|EGD22093.1| guanine deaminase [Rhodococcus equi ATCC 33707] Length = 188 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 34/136 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M + M+ A A + N P GAV + I++R NR DVTAH EI AI Sbjct: 1 MTPDEL-MNEACRLAIESVENNWGGPFGAVIARDGDIVARGQNRVLLTGDVTAHGEIEAI 59 Query: 60 RMGCRILS--------------------------------QEILPEVDLYVTLEPCTMCA 87 R ++L+ +L +++Y PC MC Sbjct: 60 RKAVQVLNAAAPSISREHVDESTLKLVPRPEGSPDRVPERARMLMGMEIYTCGAPCPMCM 119 Query: 88 AAISLARIRRLYYGAS 103 +AI +R+ +Y+ + Sbjct: 120 SAIYWSRLDAVYFASD 135 >gi|67924763|ref|ZP_00518165.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase, C-terminal [Crocosphaera watsonii WH 8501] gi|67853388|gb|EAM48745.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase, C-terminal [Crocosphaera watsonii WH 8501] Length = 348 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 50/125 (40%), Gaps = 19/125 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VGAV V N +II + + D HAE+ A+R E +YV LEPC Sbjct: 13 VGAVVVKNGQIIGEGFH--PKPGDP--HAEVFALRDAG-----ENAAGGTVYVNLEPCNH 63 Query: 84 ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C A+ AR+ ++ G +P G A E+ G+ E R+ Sbjct: 64 YGRTPPCTEALIAARVAKVVVGMVDPNPLVSGKGLAKLEDAG----IEVIVGVEETACRR 119 Query: 140 IIQDF 144 + + F Sbjct: 120 LNEAF 124 >gi|218710376|ref|YP_002417997.1| riboflavin biosynthesis protein RibD [Vibrio splendidus LGP32] gi|218323395|emb|CAV19572.1| Riboflavin biosynthesis protein ribD [Vibrio splendidus LGP32] Length = 374 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 56/149 (37%), Gaps = 22/149 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 MS A++ A+ P VG V V + +I+ + AHAE+ A+RM Sbjct: 12 MSRAIKLAKRGIYTTAPNPNVGCVIVQTDGQIVGEGFHAKAGE----AHAEVHAMRMAGD 67 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 YVTLEPC CA + A++ ++ +P G + Sbjct: 68 KA-----KGAIAYVTLEPCSHYGRTPPCAEGLIKAQVAKVICAMQDPNPKVAGRGIKMLR 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ EQ + + F K Sbjct: 123 DAC----IEVEIGLLEQDALDLNPAFIKR 147 >gi|15642269|ref|NP_231902.1| riboflavin-specific deaminase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586201|ref|ZP_01675992.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 2740-80] gi|153820478|ref|ZP_01973145.1| riboflavin biosynthesis protein RibD [Vibrio cholerae NCTC 8457] gi|153823263|ref|ZP_01975930.1| riboflavin biosynthesis protein RibD [Vibrio cholerae B33] gi|227082395|ref|YP_002810946.1| riboflavin biosynthesis protein RibD [Vibrio cholerae M66-2] gi|229507656|ref|ZP_04397161.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae BX 330286] gi|229512149|ref|ZP_04401628.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae B33] gi|229519284|ref|ZP_04408727.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae RC9] gi|229607160|ref|YP_002877808.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae MJ-1236] gi|254849400|ref|ZP_05238750.1| riboflavin-specific deaminase [Vibrio cholerae MO10] gi|298500355|ref|ZP_07010160.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MAK 757] gi|9656833|gb|AAF95415.1| riboflavin-specific deaminase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549613|gb|EAX59637.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 2740-80] gi|126508979|gb|EAZ71573.1| riboflavin biosynthesis protein RibD [Vibrio cholerae NCTC 8457] gi|126519224|gb|EAZ76447.1| riboflavin biosynthesis protein RibD [Vibrio cholerae B33] gi|227010283|gb|ACP06495.1| riboflavin biosynthesis protein RibD [Vibrio cholerae M66-2] gi|229343973|gb|EEO08948.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae RC9] gi|229352114|gb|EEO17055.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae B33] gi|229355161|gb|EEO20082.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae BX 330286] gi|229369815|gb|ACQ60238.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae MJ-1236] gi|254845105|gb|EET23519.1| riboflavin-specific deaminase [Vibrio cholerae MO10] gi|297541048|gb|EFH77102.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MAK 757] Length = 367 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 64 AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + + F K Sbjct: 119 MLRDAG----IEVEVGLLEADARVLNRGFLKR 146 >gi|328777317|ref|XP_003249314.1| PREDICTED: tRNA-specific adenosine deaminase-like protein 3-like [Apis mellifera] Length = 389 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 47/101 (46%) Query: 43 RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 R + T +E + ++ +EPC +CA A+ +RI R++YG Sbjct: 282 RRGRRNNSTCKSEQAGATNIAEKCGPYLCTGYWTFLLMEPCPLCAMALLHSRILRIFYGI 341 Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 SN G + T + + +H +++ G+ EQ ++++QD Sbjct: 342 SNKTTGVLGTKTILHAVPGLNHRYQVWSGVLEQECQRVLQD 382 >gi|294341030|emb|CAZ89425.1| Riboflavin biosynthesis protein ribD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP reductase)] [Thiomonas sp. 3As] Length = 387 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 18/154 (11%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ FM AL+ A +A R P VG V V + +++ L HAE+ A+ Sbjct: 10 EQDQRFMRRALDLAHSAMYRTSPNPRVGCVLVRDGQVLGEGA----TLAAGQDHAEVQAV 65 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + + YVTLEPC CA ++ + R+ +P G Sbjct: 66 KQAWERGHEVR--GATAYVTLEPCAHHGRTPPCADLLATQGVARVVAALVDPNPLVAGQG 123 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 Q A ++ G+ +R+I F Sbjct: 124 LQRLRDAG----IQVDVGLFADEAREINLGFISR 153 >gi|121729759|ref|ZP_01682198.1| riboflavin biosynthesis protein RibD [Vibrio cholerae V52] gi|147673692|ref|YP_001217785.1| riboflavin biosynthesis protein RibD [Vibrio cholerae O395] gi|121628510|gb|EAX60996.1| riboflavin biosynthesis protein RibD [Vibrio cholerae V52] gi|146315575|gb|ABQ20114.1| riboflavin biosynthesis protein RibD [Vibrio cholerae O395] gi|227014167|gb|ACP10377.1| riboflavin biosynthesis protein RibD [Vibrio cholerae O395] Length = 367 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 8 DHQMMSRAIELAWRGHFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 64 AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + + F K Sbjct: 119 MLRDAG----IEVEVGLLEADARVLNRGFLKR 146 >gi|255747035|ref|ZP_05420980.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholera CIRS 101] gi|262161421|ref|ZP_06030531.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae INDRE 91/1] gi|255735437|gb|EET90837.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholera CIRS 101] gi|262028732|gb|EEY47386.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae INDRE 91/1] Length = 365 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 6 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 62 AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + + F K Sbjct: 117 MLRDAG----IEVEVGLLEADARVLNRGFLKR 144 >gi|88859176|ref|ZP_01133817.1| Riboflavin biosynthesis protein [Pseudoalteromonas tunicata D2] gi|88819402|gb|EAR29216.1| Riboflavin biosynthesis protein [Pseudoalteromonas tunicata D2] Length = 373 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 58/154 (37%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ A+E A+ + P VG V V + +I+ + ++ HAE+ A+ Sbjct: 7 DYQYMALAIELAKKGRYTTSPNPNVGCVLVKDGQIVGQGYHQKAGEG----HAEVHALAQ 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +E YVTLEPC+ CA A+ A + ++ +P G Sbjct: 63 A-----KEQALGATAYVTLEPCSHTGRTGPCALALVNAGVIKVIAAMVDPNPAVSGRGLA 117 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + + + F K R Sbjct: 118 ILEKAG----IQTAHGLMQVEAEALNVGFLKRMR 147 >gi|50365494|ref|YP_053919.1| cytosine deaminase [Mesoplasma florum L1] gi|50364050|gb|AAT76035.1| cytosine deaminase [Mesoplasma florum L1] Length = 142 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 3/127 (2%) Query: 23 EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 +IPV + + +NKI+ ++ N + ++K +T HAEI + + + + L E L+ TLEP Sbjct: 19 DIPVFSCLIKDNKIVFKSKNNSYKIKKITGHAEINVMNKAFKKIKKGNLSEYTLFTTLEP 78 Query: 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 C MC AI A+I+ + Y N K N + + + + ++II Sbjct: 79 CLMCYGAIKQAKIKEIIYLTENVKL-SFRNDVNIDQIKINIRKLDHEE--LQSKYQKIIS 135 Query: 143 DFFKERR 149 DFF+++R Sbjct: 136 DFFQKKR 142 >gi|262168270|ref|ZP_06035967.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae RC27] gi|262023162|gb|EEY41866.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae RC27] Length = 365 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 6 DHQMMSRAIELAWRGHFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 62 AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + + F K Sbjct: 117 MLRDAG----IEVEVGLLEADARVLNRGFLKR 144 >gi|78065536|ref|YP_368305.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Burkholderia sp. 383] gi|77966281|gb|ABB07661.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Burkholderia sp. 383] Length = 373 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 53/154 (34%), Gaps = 20/154 (12%) Query: 1 MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M F M AL A P VG V V + ++I + HAE+ Sbjct: 1 MFSDIDFAHMQRALTLAARGMYTTAPNPRVGCVIVKDGEVIGEGFTQPAGQD----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++ + +YVTLEPC CA A+ AR+ ++ +P Sbjct: 57 QALKDA--RARGYDVAGSTVYVTLEPCSHFGRTPPCANALIEARVAKVVAAMEDPNPQVS 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A ++ G+ + ++ F Sbjct: 115 GRGLGMLRDAG----IDVRCGLLAHEAGELNIGF 144 >gi|295424908|ref|ZP_06817620.1| riboflavin biosynthesis protein RibD [Lactobacillus amylolyticus DSM 11664] gi|295065347|gb|EFG56243.1| riboflavin biosynthesis protein RibD [Lactobacillus amylolyticus DSM 11664] Length = 347 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 20/141 (14%) Query: 8 MSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL+EA + P VGAV V +N +++ + + HAE AI Sbjct: 1 MQLALQEACKGRHQTWKNPLVGAVIVKDNHVLATGYHHHFGE----RHAERDAI----SK 52 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L+ E L LYVTLEPC C+ I I+R+ +P G Sbjct: 53 LTPEQLFNSTLYVTLEPCNHFGKQPPCSQLIVNKHIKRVVIAQIDPHKLVTGKGIAALKE 112 Query: 120 ATCHHSPEIYPGISEQRSRQI 140 ++ GI +R++ Sbjct: 113 NG----IQVATGILANEARKL 129 >gi|119505172|ref|ZP_01627247.1| putative zinc-binding hydrolase [marine gamma proteobacterium HTCC2080] gi|119458863|gb|EAW39963.1| putative zinc-binding hydrolase [marine gamma proteobacterium HTCC2080] Length = 78 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 1/64 (1%) Query: 21 RNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 + E+PVGAV + ++++ A N D TAHAE+LA+R+G L+ LP LYVT Sbjct: 14 KGEVPVGAVLAADSGEVLAVASNAQIMSCDPTAHAEMLALRLGAEKLNNYRLPGCTLYVT 73 Query: 80 LEPC 83 LEPC Sbjct: 74 LEPC 77 >gi|254495519|ref|ZP_05108443.1| riboflavin biosynthesis protein RibD [Polaribacter sp. MED152] gi|85819875|gb|EAQ41032.1| riboflavin biosynthesis protein RibD [Polaribacter sp. MED152] Length = 337 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 17/126 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VGAV V NKII+ N HAE+ AI + + +L E +YVTLEPC Sbjct: 17 VGAVIVHQNKIIAEGFTSNYGGN----HAEVNAI---IAVKDKSLLKEATIYVTLEPCSH 69 Query: 84 ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA I +++++ G + G + A ++ G+ E++ ++ Sbjct: 70 YGKTPPCADLIIKHKLKKVVIGTLDTNSLVAGKGVERIEKAG----IDVKVGVLEEKCKK 125 Query: 140 IIQDFF 145 + FF Sbjct: 126 HHKRFF 131 >gi|258651398|ref|YP_003200554.1| CMP/dCMP deaminase zinc-binding [Nakamurella multipartita DSM 44233] gi|258554623|gb|ACV77565.1| CMP/dCMP deaminase zinc-binding [Nakamurella multipartita DSM 44233] Length = 164 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 2/103 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 + + +E A+ A + P G+V V + +++ NR D T H E R Sbjct: 3 ETDLRHLRRCVELAEQALDSGDEPFGSVLVTGDGTVLAEDHNRV-AGGDRTRHPEFELAR 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 LS +Y + E C MCAAA + + R+ Y S Sbjct: 62 WAAANLSPHERRAATVYTSGEHCPMCAAAHAWVGLGRIVYATS 104 >gi|209884995|ref|YP_002288852.1| riboflavin biosynthesis protein RibD [Oligotropha carboxidovorans OM5] gi|209873191|gb|ACI92987.1| riboflavin biosynthesis protein RibD [Oligotropha carboxidovorans OM5] Length = 380 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 49/145 (33%), Gaps = 21/145 (14%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + FM AL + P VGAV V + I+ R + HAE A++ Sbjct: 14 EDHRFMQLALALGRRGQGATWPNPAVGAVVVKDGVILGRGWTQPGGR----PHAEPQALQ 69 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 LYVTLEPC C AI ++ I R+ +P G Sbjct: 70 RAGEAA-----RGATLYVTLEPCSHYGKSPPCVDAIIVSGIARVVSAIEDPNPQVAGQGH 124 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139 A + G+ + Q Sbjct: 125 VRLRDAG----ITVDVGLCRDEAAQ 145 >gi|15805630|ref|NP_294326.1| cytidine/deoxycytidylate deaminase/NUDIX/methyltransferase domain-containing protein [Deinococcus radiodurans R1] gi|6458301|gb|AAF10182.1|AE001918_7 cytidine/deoxycytidylate deaminase/nudix/methyltransferase domains protein [Deinococcus radiodurans R1] Length = 548 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 38/116 (32%), Positives = 50/116 (43%), Gaps = 13/116 (11%) Query: 11 ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNR----------NRELKDVTAHAEILAI 59 A+ EA N L P+GA V I+ R NR D AHAEI A+ Sbjct: 12 AMSEAWNGFLYGSYPIGACIVDAQGNIVGRGRNRLGEPRRAHAGVIGGHD-LAHAEINAL 70 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + E L L T+EPC CA A++++ IR + Y A +P GG T Sbjct: 71 LSVPDLRRPECLSWTVL-TTVEPCPQCAGAVAMSGIRGVSYAAPDPWGGCARLLTD 125 >gi|116073254|ref|ZP_01470516.1| Riboflavin biosynthesis protein RibD [Synechococcus sp. RS9916] gi|116068559|gb|EAU74311.1| Riboflavin biosynthesis protein RibD [Synechococcus sp. RS9916] Length = 386 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 53/149 (35%), Gaps = 26/149 (17%) Query: 7 FMSCALEEAQNAALRNEI---P-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL+ A A P VGAV + +++ + HAE+ A+ Sbjct: 11 WMRRALQLA--ALADGHTSPNPLVGAVVLDAAGQLVGEGFHARAGE----PHAEVGALAQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + VTLEPC CA A+ A I+R+ ++P G Q Sbjct: 65 AGDAA-----RGGTIVVTLEPCCHHGRTPPCADAVIAAGIQRVVVALTDPDPRVAGGGLQ 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E + + F Sbjct: 120 RLRDAGL----EVISGVLEAEAAYQNRAF 144 >gi|29827131|ref|NP_821765.1| cytidine/deoxycytidine deaminase [Streptomyces avermitilis MA-4680] gi|29604229|dbj|BAC68300.1| putative cytidine/deoxycytidine deaminase [Streptomyces avermitilis MA-4680] Length = 145 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 58/145 (40%), Gaps = 7/145 (4%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + A+ A +A + P G++ + I++ A N R D+ AH E+ R Sbjct: 5 EDETLLRRAIGIAAHAVTLGDAPYGSLLTGPDGAILAEAHNTVRRDNDIAAHPELKLARW 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 R L+ +Y + +PCTMCA I + I R+ Y S E + + Sbjct: 65 AARELAPAAAARTTMYTSCQPCTMCAGGIVRSGIGRVVYALS------TEQLVELNPQSG 118 Query: 122 CHHSPEIYPGISEQRSRQIIQDFFK 146 + + + +R I +++ Sbjct: 119 DWPTVPQDGPVLFEEARAPIDAYYR 143 >gi|268611450|ref|ZP_06145177.1| putative Cytidine/deoxycytidylate deaminase, zinc-binding region (CMP/dCMP deaminase, zinc-binding) protein [Ruminococcus flavefaciens FD-1] Length = 211 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 16/140 (11%) Query: 12 LEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRE--LKDV-TAHAEILAIRMG-CRIL 66 LEEA A IPVGA V + +++ + NR E + TAHAE+ I+ CR Sbjct: 13 LEEAWTAFTSGSIPVGAAVFSKDGELLVKDHNRRNEPGTLNPRTAHAELNVIQHIDCRYG 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 E +LY ++EPC MC AI ++ I+ L+ G+ + G + T Sbjct: 73 LNIR--ETELYTSMEPCPMCMGAIVMSNIKHLHCGSHDRWCGALH---LLDTDPYMRSQH 127 Query: 127 EIYPGISEQRSRQIIQDFFK 146 I E +FF+ Sbjct: 128 ISVSDIPED------TEFFQ 141 >gi|171315490|ref|ZP_02904726.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria MEX-5] gi|171099327|gb|EDT44065.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria MEX-5] Length = 373 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 20/154 (12%) Query: 1 MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M F M AL A P VG V V + +I + HAE+ Sbjct: 1 MFSDTDFAHMQRALTLAARGMYTTAPNPRVGCVIVKDGNVIGEGFTQPAGQD----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++ + +YVTLEPC CA A+ AR+ ++ +P Sbjct: 57 QALKNA--RTRGHDVAGSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A ++ G+ + ++ F Sbjct: 115 GRGLGMLRDAG----IDVRCGLLANEAGELNIGF 144 >gi|212212876|ref|YP_002303812.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Coxiella burnetii CbuG_Q212] gi|212011286|gb|ACJ18667.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Coxiella burnetii CbuG_Q212] Length = 354 Score = 94.6 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 17/125 (13%) Query: 7 FMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 ++ AL A + VGAV V ++KIIS ++ HAE+ AI+ Sbjct: 8 YLKKALSLAEIRRGFCAPNPSVGAVVVKDDKIISTGFHKR----SGLPHAEVEAIKSLGD 63 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LYVTLEPC C I + I+ +YYG +P G + Sbjct: 64 KA-----RGAALYVTLEPCCHFGKTPPCTDLIIQSGIKAVYYGLHDPNLAVCGKGIEQLQ 118 Query: 119 LATCH 123 A + Sbjct: 119 RAGVN 123 >gi|94970364|ref|YP_592412.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Candidatus Koribacter versatilis Ellin345] gi|94552414|gb|ABF42338.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus Koribacter versatilis Ellin345] Length = 399 Score = 94.6 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 57/155 (36%), Gaps = 22/155 (14%) Query: 4 GNVFMSCALEEAQN--AALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 F ALE A A VGAV V + ++I + D HAE+LA+ Sbjct: 16 DERFTLRALELASKGIAMASPNPRVGAVVVNADGEVIGEGFHM----YDGLKHAEVLALE 71 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 LY+ LEPC+ CA A+ A I+R+ +P G Sbjct: 72 QAGNAA-----RGATLYLNLEPCSHEGRTGPCADAVIAAGIKRVVCSMPDPNPLVAGRGF 126 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ +R++ + F K R Sbjct: 127 AKLREAG----VELLVGVFADYARKLNEGFSKRIR 157 >gi|327484786|gb|AEA79193.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio cholerae LMA3894-4] Length = 365 Score = 94.6 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A + P VG V +I+ + HAE+ A+R Sbjct: 6 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A + ++ +P G Q Sbjct: 62 AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + + F K Sbjct: 117 MLRDAG----IEVEVGLLEADARVLNRGFLKR 144 >gi|88809077|ref|ZP_01124586.1| riboflavin biosynthesis protein RibD [Synechococcus sp. WH 7805] gi|88787019|gb|EAR18177.1| riboflavin biosynthesis protein RibD [Synechococcus sp. WH 7805] Length = 372 Score = 94.6 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 34/147 (23%), Positives = 49/147 (33%), Gaps = 22/147 (14%) Query: 7 FMSCALEEAQNA--ALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ALE A A VGAV + ++ + HAE+ A+ Sbjct: 14 WMRRALELAALADGYTSPNPLVGAVVLDPSGTLVGEGFHARAGE----PHAEVGALAQAG 69 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + VTLEPC C A+ A I R+ ++P G Q Sbjct: 70 DAA-----RGGTIIVTLEPCCHHGRTPPCTDALIKAGIARVVVALTDPDPRVAGGGLQRL 124 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E + Q F Sbjct: 125 RDAG----VEVISGVLEAEAAQQNYAF 147 >gi|302556984|ref|ZP_07309326.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Streptomyces griseoflavus Tu4000] gi|302474602|gb|EFL37695.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Streptomyces griseoflavus Tu4000] Length = 161 Score = 94.2 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 11/152 (7%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++ +E A A + P G+V V + +++ NR D T H E R Sbjct: 10 YLRRCVELAAEALESGDEPFGSVLVAGDGTVLAEDHNRV-ASGDRTRHPEFELARWAAAR 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA-TCHH 124 + +Y + E C MCAAA + + R+ Y AS+ + Sbjct: 69 MPPAERAAATVYTSGEHCPMCAAAHAWVGLGRIVYVASSAQLTAWLGELGVPAPPVRALP 128 Query: 125 SPEIYPGI--------SEQRSRQIIQDFFKER 148 E+ PG+ + ++ + F + R Sbjct: 129 VSEVAPGVTVDGPVPELAEEVGRLHRRFHRGR 160 >gi|312139695|ref|YP_004007031.1| cytidine/deoxycytidylate deaminase [Rhodococcus equi 103S] gi|311889034|emb|CBH48347.1| putative cytidine/deoxycytidylate deaminase [Rhodococcus equi 103S] Length = 194 Score = 94.2 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 34/136 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M + M+ A A + N P GAV + I++R NR DVTAH EI AI Sbjct: 7 MTPDEL-MNEACRLAIESVENNWGGPFGAVIARDGDIVARGQNRVLLTGDVTAHGEIEAI 65 Query: 60 RMGCRILS--------------------------------QEILPEVDLYVTLEPCTMCA 87 R ++L+ +L +++Y PC MC Sbjct: 66 RKAVQVLNAAAPSISREHVDESTLKLVPRPEGSPDRVPERARMLMGMEIYTCGAPCPMCM 125 Query: 88 AAISLARIRRLYYGAS 103 +AI +R+ +Y+ + Sbjct: 126 SAIYWSRLDAVYFASD 141 >gi|29653981|ref|NP_819673.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Coxiella burnetii RSA 493] gi|29541244|gb|AAO90187.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Coxiella burnetii RSA 493] Length = 354 Score = 94.2 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 17/125 (13%) Query: 7 FMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 ++ AL A + VGAV V ++KIIS ++ HAE+ AI+ Sbjct: 8 YLKKALSLAEIRRGFCAPNPSVGAVVVKDDKIISTGFHKR----SGLPHAEVEAIKSLGD 63 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LYVTLEPC C I + I+ +YYG +P G + Sbjct: 64 KA-----RGAALYVTLEPCCHFGKTPPCTDLIIQSGIKAVYYGLHDPNLAVCGKGIEQLQ 118 Query: 119 LATCH 123 A + Sbjct: 119 RAGVN 123 >gi|254370029|ref|ZP_04986036.1| predicted protein [Francisella tularensis subsp. tularensis FSC033] gi|151568274|gb|EDN33928.1| predicted protein [Francisella tularensis subsp. tularensis FSC033] Length = 66 Score = 94.2 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 35/61 (57%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM A ++A A E+P+GAV V +++II + N+ L D TAHAEIL +R Sbjct: 6 DQDIFFMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLRS 65 Query: 62 G 62 Sbjct: 66 A 66 >gi|77458955|ref|YP_348461.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudomonas fluorescens Pf0-1] gi|77382958|gb|ABA74471.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas fluorescens Pf0-1] Length = 169 Score = 94.2 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 59/153 (38%), Gaps = 11/153 (7%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRE-LKDVTAHAEILAIRM 61 + + ++ + R P A+ N K+I AGN + D T HAE++A Sbjct: 16 DLTLLRQTIALSEASKQRGRHPFAALVADRNGKVIVEAGNNSMPPEGDPTQHAELVAAAA 75 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE---------N 112 ++LS + L LY + EPC MCA A+ I R+ Y S G+ + Sbjct: 76 AAKLLSPQELELCTLYTSAEPCCMCAGAVYWTGIGRVVYALSEHALLGLTGDHPENPTFS 135 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A + + E + + + F+ Sbjct: 136 LPCREVFAKGQRKVSVLGPMLEGEAAEPHRGFW 168 >gi|107022039|ref|YP_620366.1| riboflavin biosynthesis protein RibD [Burkholderia cenocepacia AU 1054] gi|116688983|ref|YP_834606.1| riboflavin biosynthesis protein RibD [Burkholderia cenocepacia HI2424] gi|105892228|gb|ABF75393.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Burkholderia cenocepacia AU 1054] gi|116647072|gb|ABK07713.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Burkholderia cenocepacia HI2424] Length = 373 Score = 94.2 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 20/154 (12%) Query: 1 MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M F M AL A P VG V V + +I + HAE+ Sbjct: 1 MFSDTDFAHMQRALALAARGMYTTAPNPRVGCVIVKDGDVIGEGFTQPAGQD----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++ + +YVTLEPC CA A+ AR+ ++ +P Sbjct: 57 QALKDA--RSRGYDVAGSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A ++ G+ + ++ F Sbjct: 115 GRGLGMLRDAG----IDVRCGLLAHEAGELNIGF 144 >gi|170732274|ref|YP_001764221.1| riboflavin biosynthesis protein RibD [Burkholderia cenocepacia MC0-3] gi|169815516|gb|ACA90099.1| riboflavin biosynthesis protein RibD [Burkholderia cenocepacia MC0-3] Length = 373 Score = 94.2 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 20/154 (12%) Query: 1 MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M F M AL A P VG V V + +I + HAE+ Sbjct: 1 MFSDTDFAHMQRALALAARGMYTTAPNPRVGCVIVKDGDVIGEGFTQPAGQD----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++ + +YVTLEPC CA A+ AR+ ++ +P Sbjct: 57 QALKDA--RSRGYDVAGSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A ++ G+ + ++ F Sbjct: 115 GRGLGMLRDAG----IDVRCGLLAHEAGELNIGF 144 >gi|238490276|ref|XP_002376375.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357] gi|220696788|gb|EED53129.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357] Length = 162 Score = 94.2 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 1/103 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 + ++ ++ A+ A + P G+V V K+I NR DVT H E ++ Sbjct: 4 ESDINYLRRCVDLAREALEAGDSPFGSVLVDAAGKVIYEDRNRTVTEADVTWHPEFTIVK 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + L+ +Y + E C MCAAA + A + R+ Y +S Sbjct: 64 WAQKNLTPTERAAATVYTSGEHCPMCAAAHANAGLGRIVYASS 106 >gi|121602090|ref|YP_988935.1| riboflavin biosynthesis protein RibD [Bartonella bacilliformis KC583] gi|120614267|gb|ABM44868.1| riboflavin biosynthesis protein RibD [Bartonella bacilliformis KC583] Length = 374 Score = 94.2 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 58/154 (37%), Gaps = 25/154 (16%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNK----IISRAGNRNRELKDVTAHAEI 56 + FM+ A+ A+ L NE P VGA+ V N+ I+ HAE+ Sbjct: 6 QDCRFMAAAIRLAERHVGLTNENPSVGALIVRNDSTGPFIVGYG----VTALRGRPHAEV 61 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 A++M + Y+TLEPC C ++ A I R+ +P Sbjct: 62 QALQMAGPLS-----KGATAYITLEPCVHYGKTSPCVDSLIDAGIARVVIALIDPDERVC 116 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ S +++ + Sbjct: 117 GRSIALLQAAD----IEVVKGVLEKESSEMLSAY 146 >gi|156368641|ref|XP_001627801.1| predicted protein [Nematostella vectensis] gi|156214721|gb|EDO35701.1| predicted protein [Nematostella vectensis] Length = 291 Score = 94.2 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 61/149 (40%), Gaps = 27/149 (18%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCR 64 ++ A + AQ A + ++ +GA V ++++ A + HA ++ I + + Sbjct: 138 YVRFAQQAAQYAKSKQQVGIGAAMVDPETKRVVAVACDLRHHGH-PLQHAVMVVIDLVAQ 196 Query: 65 ILS--QEIL----------------------PEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L DLYVT EPC MCA A+ +RIRR++Y Sbjct: 197 SQGAGSWCLGGRDMDASLKNINSKLDLPYLCTGYDLYVTQEPCVMCAMALVHSRIRRVFY 256 Query: 101 GASNPKGGGIENGTQFYTLATCHHSPEIY 129 + G + + + +T +H E++ Sbjct: 257 SCGDSIRGALGSKYKLHTQKALNHHFEVF 285 >gi|149392256|gb|ABR25967.1| cytidine/deoxycytidylate deaminase family protein [Oryza sativa Indica Group] gi|215713595|dbj|BAG94732.1| unnamed protein product [Oryza sativa Japonica Group] Length = 116 Score = 94.2 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 39/70 (55%) Query: 43 RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 + D TAHAE+ AIR C+ L + L + ++Y + EPC MC A+ L+RI+RL YGA Sbjct: 1 MVLKHTDPTAHAEVTAIREACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGA 60 Query: 103 SNPKGGGIEN 112 I Sbjct: 61 KAEAAIAIGF 70 >gi|153209016|ref|ZP_01947210.1| riboflavin biosynthesis protein RibD [Coxiella burnetii 'MSU Goat Q177'] gi|165920291|ref|ZP_02219563.1| riboflavin biosynthesis protein RibD [Coxiella burnetii RSA 334] gi|212219122|ref|YP_002305909.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Coxiella burnetii CbuK_Q154] gi|120575553|gb|EAX32177.1| riboflavin biosynthesis protein RibD [Coxiella burnetii 'MSU Goat Q177'] gi|165916847|gb|EDR35451.1| riboflavin biosynthesis protein RibD [Coxiella burnetii RSA 334] gi|212013384|gb|ACJ20764.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Coxiella burnetii CbuK_Q154] Length = 354 Score = 94.2 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 17/125 (13%) Query: 7 FMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 ++ AL A + VGAV V ++KIIS ++ HAE+ AI+ Sbjct: 8 YLKKALSLAEIRRGFCAPNPSVGAVVVKDDKIISTGFHKR----SGLPHAEVEAIKSLGD 63 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LYVTLEPC C I + I+ +YYG +P G + Sbjct: 64 KA-----RGAALYVTLEPCCHFGKTPPCTDLIIQSGIKAVYYGLHDPNLAVCGKGIEQLQ 118 Query: 119 LATCH 123 A + Sbjct: 119 RAGVN 123 >gi|324520795|gb|ADY47713.1| tRNA-specific adenosine deaminase-like protein 3 [Ascaris suum] Length = 297 Score = 94.2 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 12/122 (9%) Query: 16 QNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC---RILSQEIL 71 + A G V V + I + +G R R HA + A+ C RI +I+ Sbjct: 174 RKAEKIGNGDAGCVIVDLDGNIAAESGVRPR----PLGHAVMSAVEDLCESHRIQGSDIV 229 Query: 72 ----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 D+Y+T EPC+MCA A+ R+ R+++G N GG +E+ + +H Sbjct: 230 QYLGTGFDVYLTHEPCSMCAMALVHFRVGRVFFGKRNANGGALESSWRIQEEKRINHHYR 289 Query: 128 IY 129 ++ Sbjct: 290 VF 291 >gi|148242850|ref|YP_001228007.1| riboflavin biosynthesis protein ribD (diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase) [Synechococcus sp. RCC307] gi|147851160|emb|CAK28654.1| Riboflavin biosynthesis protein ribD (Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase) [Synechococcus sp. RCC307] Length = 366 Score = 94.2 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 20/131 (15%) Query: 26 VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83 VG V + N +++ +R HAE++A+R + LYVTLEPC Sbjct: 33 VGCVVLDANGELVGEGYHRQAGE----PHAEVMALRRAG-----DRAKGGTLYVTLEPCC 83 Query: 84 -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 C+ A+ A +RR+ ++P G A E+ G+ + + Sbjct: 84 HHGRTPPCSEAVIAAGLRRVVIALADPDPRVAGGGIAQLKAAG----MEVISGVRQAEAA 139 Query: 139 QIIQDFFKERR 149 Q + F R Sbjct: 140 QQNRAFLHRIR 150 >gi|167586436|ref|ZP_02378824.1| riboflavin biosynthesis protein RibD [Burkholderia ubonensis Bu] Length = 257 Score = 94.2 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 20/154 (12%) Query: 1 MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M F M AL A P VG V V + +I + HAE+ Sbjct: 1 MFSDTDFAHMQRALALAARGMYTTTPNPRVGCVIVKDGDVIGEGFTQPAGQD----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++ + +YVTLEPC CA A+ AR+ ++ +P Sbjct: 57 QALKDA--RSRGHDVAGSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A ++ G+ + ++ F Sbjct: 115 GRGLGMLRDAG----IDVRCGLLAHEAGELNIGF 144 >gi|75907679|ref|YP_321975.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Anabaena variabilis ATCC 29413] gi|75701404|gb|ABA21080.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Anabaena variabilis ATCC 29413] Length = 396 Score = 94.2 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 55/145 (37%), Gaps = 21/145 (14%) Query: 8 MSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M LE A+ A R P VGAV V + +I+ + HAE+ A+R + Sbjct: 42 MQRCLELARRALGRTSPNPLVGAVVVKDGEIVGEGFHPRAGE----PHAEVFALRAAGEL 97 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +YV LEPC C+ + A + ++ G +P G + Sbjct: 98 A-----RGATVYVNLEPCNHYGRTPPCSEGLIAAGVAKVVVGMVDPNPLVGGGGIERLRG 152 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ +Q+ + F Sbjct: 153 AG----VEVLVGVEMAACQQLNEGF 173 >gi|161830583|ref|YP_001596568.1| riboflavin biosynthesis protein RibD [Coxiella burnetii RSA 331] gi|161762450|gb|ABX78092.1| riboflavin biosynthesis protein RibD [Coxiella burnetii RSA 331] Length = 354 Score = 94.2 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 17/125 (13%) Query: 7 FMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 ++ AL A + VGAV V ++KIIS ++ HAE+ AI+ Sbjct: 8 YLKKALSLAEIRRGFCAPNPSVGAVVVKDDKIISTGFHKR----SGLPHAEVEAIKSLGD 63 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LYVTLEPC C I + I+ +YYG +P G + Sbjct: 64 KA-----RGAALYVTLEPCCHFGKTPPCTDLIIQSGIKDVYYGLHDPNLAVCGKGIEQLQ 118 Query: 119 LATCH 123 A + Sbjct: 119 RAGVN 123 >gi|319898992|ref|YP_004159085.1| Riboflavin biosynthesis protein ribD [Bartonella clarridgeiae 73] gi|319402956|emb|CBI76507.1| Riboflavin biosynthesis protein ribD [Bartonella clarridgeiae 73] Length = 374 Score = 94.2 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 56/154 (36%), Gaps = 25/154 (16%) Query: 3 KGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNK----IISRAGNRNRELKDVTAHAEI 56 + FM+ A+ A+ L + P VGA+ V NN+ I+ HAE+ Sbjct: 6 QDKRFMAAAIRLAERHINLTGKNPSVGALIVKNNETDASIVGYG----VTAVQGRPHAEV 61 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+ M + Y+TLEPC C A+ A I R+ +P Sbjct: 62 QALLMAGPLAY-----GATAYITLEPCSHYGKTPPCVNALIDAGIARVVIALPDPDQRVY 116 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A E+ G+ + + + + + Sbjct: 117 GRGIALLRSAG----IEVVEGVLAEEAFETLSAY 146 >gi|206561395|ref|YP_002232160.1| multifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Burkholderia cenocepacia J2315] gi|198037437|emb|CAR53372.1| multifunctional riboflavin biosynthetic protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase] [Burkholderia cenocepacia J2315] Length = 373 Score = 94.2 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 20/154 (12%) Query: 1 MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M F M AL A P VG V V + +I + HAE+ Sbjct: 1 MFSDTDFAHMQRALALAARGMYTTAPNPRVGCVIVKDGDVIGEGFTQPAGQD----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++ + +YVTLEPC CA A+ AR+ ++ +P Sbjct: 57 QALKDA--RSRGYDVAGSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A ++ G+ + ++ F Sbjct: 115 GRGLGMLRDAG----IDVRCGLLAHEAGELNIGF 144 >gi|271965577|ref|YP_003339773.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Streptosporangium roseum DSM 43021] gi|270508752|gb|ACZ87030.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Streptosporangium roseum DSM 43021] Length = 159 Score = 94.2 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 56/156 (35%), Gaps = 17/156 (10%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 + +E A A + P G+V V + +++ NR D T H E R Sbjct: 4 DTDLRHLRRCVELATEALEVGDEPFGSVLVAADGTVLAEDHNRV-ASGDRTRHPEFELAR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ +Y + E C MCAAA + R+ Y +S+ + + + + Sbjct: 63 WAAANMTPGDRAAATVYTSGEHCPMCAAAHGWVGLGRIVYASSSEQ---LSSWLAELGVP 119 Query: 121 TCHHSP----EIYPGI--------SEQRSRQIIQDF 144 E+ PG+ ++ R + + F Sbjct: 120 APPVRTLPIREVVPGLVVEGPVPGLAEQVRDLHRRF 155 >gi|251790670|ref|YP_003005391.1| riboflavin biosynthesis protein RibD [Dickeya zeae Ech1591] gi|247539291|gb|ACT07912.1| riboflavin biosynthesis protein RibD [Dickeya zeae Ech1591] Length = 370 Score = 94.2 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 59/155 (38%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ ALE A+ P VG V V + +I+ ++ HAE+ A+R Sbjct: 5 SDEFYMARALELARRGRFTTAPNPNVGCVIVRDGEIVGEGYHQKAGE----PHAEVHALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC CA A+ A + R+ +P G Sbjct: 61 MAGDKAH-----GATAYVTLEPCSHHGRTPPCADALVAAGVARVVAAMQDPNPQVAGRGL 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ +++ +I + F K R Sbjct: 116 HRLQQAG----IAVHHGVLMEQAEKINRGFLKRMR 146 >gi|320164019|gb|EFW40918.1| tRNA-specific adenosine deaminase 2 [Capsaspora owczarzaki ATCC 30864] Length = 307 Score = 93.8 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL++A A E+PVG V VL ++I R NR E K+ T HAE AI Sbjct: 18 HERFMQSALDKAYEALEVGEVPVGCVIVLRETGQVIGRGCNRTNETKNATRHAEFEAIDE 77 Query: 62 GCRI 65 R Sbjct: 78 VLRW 81 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 17/125 (13%) Query: 39 RAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 RAG+ + + L+ R S +I DLYVT+EPC MCAAA+ L I + Sbjct: 162 RAGSLSASPHSPPTLSLFLSERATSVATSTQIFQHCDLYVTVEPCVMCAAALRLVGIGAV 221 Query: 99 YYGASNPKGGGIENGTQFY----------------TLATCHHSP-EIYPGISEQRSRQII 141 YYG N + GG + + + P GI ++ Q++ Sbjct: 222 YYGCGNDRFGGCGSVLDIHSEMHRRASSDDASAGAADPNRNSRPFRCISGIMRLQAIQLL 281 Query: 142 QDFFK 146 +DF++ Sbjct: 282 RDFYQ 286 >gi|239816083|ref|YP_002944993.1| riboflavin biosynthesis protein RibD [Variovorax paradoxus S110] gi|239802660|gb|ACS19727.1| riboflavin biosynthesis protein RibD [Variovorax paradoxus S110] Length = 375 Score = 93.8 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 19/150 (12%) Query: 7 FMSCALEEAQNAA-LRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM+ AL+ A+ A + P VG V V N +I + R +++ HAE++A+R Sbjct: 10 FMAQALDLARQAGPETDPNPRVGCVLVDANGAVIGQG--RTQQVGGP--HAEVMALRDAA 65 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + +VTLEPC C A++ A I R+ ++P G + Sbjct: 66 ARGHS--VAGATAFVTLEPCAHHGRTGPCCDALAAAGIGRVVASLADPNPLVAGKGFERL 123 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + E+ PG + +R++ FF Sbjct: 124 RAAGV--AVEVGPG--AEEARELNIGFFSR 149 >gi|84394363|ref|ZP_00993084.1| Pyrimidine reductase, riboflavin biosynthesis [Vibrio splendidus 12B01] gi|84375022|gb|EAP91948.1| Pyrimidine reductase, riboflavin biosynthesis [Vibrio splendidus 12B01] Length = 364 Score = 93.8 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 55/149 (36%), Gaps = 22/149 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 MS A++ A+ P VG V V + +I+ + HAE+ A+RM Sbjct: 2 MSRAIQLAKRGIYTTAPNPNVGCVIVQTDGQIVGEGFHAKAGE----PHAEVHAMRMAGD 57 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 YVTLEPC CA + A++ ++ +P G + Sbjct: 58 KA-----KGATAYVTLEPCSHYGRTPPCAEGLIKAQVAKVICAMQDPNPKVAGRGIKMLR 112 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ EQ + + F K Sbjct: 113 DAG----IEVEIGLLEQDALDLNPAFIKR 137 >gi|256379414|ref|YP_003103074.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827] gi|255923717|gb|ACU39228.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827] Length = 158 Score = 93.8 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 51/142 (35%), Gaps = 13/142 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 ++ A+ EA+ +P+GA + ++ NR + D + HAE Sbjct: 16 LAVAVAEARAGLAEGGVPIGAALFGPDGRLWGSGRNRRVQDDDASTHAETA---AFRAAG 72 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 + + TL PC C+ + I R+ G + GG + + H Sbjct: 73 RRAGYRGTTMVTTLSPCWYCSGLVRQFGISRVVIGEARTFSGGHDWLAE--------HGV 124 Query: 127 EIYPGISEQRSRQIIQDFFKER 148 EI + + +++ F R Sbjct: 125 EIVL-VDDAECAELMTAFVAAR 145 >gi|313835935|gb|EFS73649.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL037PA2] gi|314970655|gb|EFT14753.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL037PA3] gi|328906122|gb|EGG25897.1| riboflavin biosynthesis protein RibD [Propionibacterium sp. P08] Length = 331 Score = 93.8 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 21/144 (14%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL A + + P VG V V + ++I + +R T HAEI A+R Sbjct: 9 MTLALNMAGKSPCPDPNPRVGCVIVADERVIGQGWHR----GAGTPHAEIEALRQAG--- 61 Query: 67 SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + VTLEPC C+ A+ A I R+ +P G Q+ Sbjct: 62 --DGARGATAVVTLEPCNHTGRTGPCSHALLDAGITRVVIAQPDPNPAASG-GEQWLRA- 117 Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144 H E G+ +++ + D+ Sbjct: 118 ---HGVEAVTGVLGEKATTLNADW 138 >gi|148976617|ref|ZP_01813304.1| riboflavin-specific deaminase [Vibrionales bacterium SWAT-3] gi|145963968|gb|EDK29226.1| riboflavin-specific deaminase [Vibrionales bacterium SWAT-3] Length = 367 Score = 93.8 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 55/149 (36%), Gaps = 22/149 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 MS A+ A+ P VG V V + +I+ + HAE+ A+RM Sbjct: 12 MSRAIHLAKRGIYTTAPNPNVGCVIVQTDGQIVGEGFHAKAGE----PHAEVHAMRMAGD 67 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +YVTLEPC CA + A++ ++ +P G + Sbjct: 68 KA-----KGATVYVTLEPCSHYGRTPPCAEGLIKAQVAKVICAMQDPNPKVAGRGIKMLR 122 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ EQ + + F K Sbjct: 123 DAG----IEVEIGLLEQDALDLNPAFIKR 147 >gi|238026457|ref|YP_002910688.1| Pyrimidine reductase, riboflavin biosynthesis [Burkholderia glumae BGR1] gi|237875651|gb|ACR27984.1| Pyrimidine reductase, riboflavin biosynthesis [Burkholderia glumae BGR1] Length = 372 Score = 93.8 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 53/154 (34%), Gaps = 20/154 (12%) Query: 1 MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M F M AL+ + P VG V V + +I + HAE+ Sbjct: 1 MFSDTDFAHMQRALDLSSRGMYTTTPNPRVGCVIVKDGVVIGEGYTQPAGQD----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++ L +YVTLEPC CA + AR+ R+ +P Sbjct: 57 QAMKDA--RSRGHDLRGATVYVTLEPCSHFGRTPPCAQGLIDARVARVIAAMEDPNPAVS 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A E+ G+ Q + ++ F Sbjct: 115 GRGLAMLRDAG----IEVRCGLLAQEAHEMNIGF 144 >gi|314927222|gb|EFS91053.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL044PA1] Length = 331 Score = 93.8 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 21/144 (14%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ AL A + + P VG V V + ++I + +R T HAEI A+R Sbjct: 9 MTLALNMAGKSPCPDPNPRVGCVIVADERVIGQGWHR----GAGTPHAEIEALRQAG--- 61 Query: 67 SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + VTLEPC C+ A+ A I R+ +P G Q+ Sbjct: 62 --DGARGATAVVTLEPCNHTGRTGPCSHALLDAGITRVVIAQPDPNPAASG-GEQWLRA- 117 Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144 H E G+ +++ + D+ Sbjct: 118 ---HGVEAVTGVLGEKATTLNADW 138 >gi|294083733|ref|YP_003550490.1| bifunctional deaminase-reductase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663305|gb|ADE38406.1| bifunctional deaminase-reductase [Candidatus Puniceispirillum marinum IMCC1322] Length = 366 Score = 93.8 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 52/146 (35%), Gaps = 22/146 (15%) Query: 8 MSCALEEAQNA--ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A+ EA+ A PVG V + + ++I HAE +A+ M + Sbjct: 1 MRYAISEARKAVGRAAENPPVGCVIIAASGQLIGAGH--TARTGRP--HAETVALAMAGQ 56 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 YVTLEPC CA A+ A IRR+ +P G Sbjct: 57 -----RAHGGTAYVTLEPCAHHGQTPPCATALIEAGIRRVVIACQDPDRRVNGKGVTMLR 111 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ I + ++Q F Sbjct: 112 AAG----IDVITDIGSDMAYSVMQGF 133 >gi|87125464|ref|ZP_01081309.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and5-amino-6-(5-phosphoribosylamino)uracil reductase [Synechococcus sp. RS9917] gi|86166764|gb|EAQ68026.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and5-amino-6-(5-phosphoribosylamino)uracil reductase [Synechococcus sp. RS9917] Length = 369 Score = 93.8 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 26/155 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVL-NNKIISRAGNRNRELKDVTAHAE 55 +++ +M AL+ A A + + P VGAV + + ++ + HAE Sbjct: 3 IERWIPWMRRALQLA--ALVEGQTSPNPLVGAVVLDAHGTLVGEGYHARAGK----PHAE 56 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109 + A+ L VTLEPC C A+ A IRR+ ++P Sbjct: 57 VGALVQAGEAA-----RGGTLVVTLEPCCHHGRTPPCVEAVIAAGIRRVVVALTDPDPRM 111 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G Q A E+ PG+ E + + F Sbjct: 112 AGGGLQRLRDAGL----EVIPGVLEAEAAHQNRAF 142 >gi|312195390|ref|YP_004015451.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c] gi|311226726|gb|ADP79581.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c] Length = 154 Score = 93.8 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 43/121 (35%), Gaps = 4/121 (3%) Query: 22 NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 + P GAV V + NR D TAHAE +AIR+ + L + + E Sbjct: 23 GDNPYGAVLVTADGQAVEERNRVVTTSDPTAHAESMAIRVAAKTWGI-DLSGATMVASFE 81 Query: 82 PCTMCAAAISLARIRRLYYGASN---PKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 PC MC AI A I L G G L H+ ++ G + Sbjct: 82 PCPMCCGAILEAGITVLAIGQRRTVGEAPLGRYTVENLLELVDRPHALQVVTGEFGDEAA 141 Query: 139 Q 139 Sbjct: 142 A 142 >gi|209527094|ref|ZP_03275608.1| riboflavin biosynthesis protein RibD [Arthrospira maxima CS-328] gi|209492434|gb|EDZ92775.1| riboflavin biosynthesis protein RibD [Arthrospira maxima CS-328] Length = 388 Score = 93.8 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 52/149 (34%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M L A+ P VG V V +++II + HAEI A+R Sbjct: 13 DRQMMRNCLNLAKEGLGKTAPNPLVGCVIVRDDQIIGEGFH----PGPGQPHAEIFALRS 68 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + +YV LEPC C+ A+ A + ++ G +P G Sbjct: 69 AGELA-----RGATVYVNLEPCNHYGRTPPCSEALIKAGVAKVVAGMVDPNPLVGGQGIA 123 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E ++ + F Sbjct: 124 KLRQAG----IEVIVGVEESACLKLNEAF 148 >gi|284043456|ref|YP_003393796.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM 14684] gi|283947677|gb|ADB50421.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM 14684] Length = 158 Score = 93.4 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 8/145 (5%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAIRM 61 + ++ A+ +Q A + P GA+ V ++ ++ N +DV+AH E+ Sbjct: 7 RDVHWLRMAIALSQQARAAGDEPFGALLVGAGGVLLAQERNSVVTDRDVSAHPELKLAVW 66 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS----NPKGGGIENGTQFY 117 R L E+ +Y + E C MCAAA+ A + L Y S G Sbjct: 67 AGRNLDPEVARLTTMYTSCENCAMCAAAMVWANLGTLVYSLSGTSLTELQGPRHTTMTIR 126 Query: 118 TLATCHHS---PEIYPGISEQRSRQ 139 H+ E+ + E+ +R Sbjct: 127 AREIFLHTSRPVEVRGPLIEEEARA 151 >gi|89897925|ref|YP_515035.1| riboflavin biosynthesis protein [Chlamydophila felis Fe/C-56] gi|89331297|dbj|BAE80890.1| riboflavin biosynthesis protein [Chlamydophila felis Fe/C-56] Length = 377 Score = 93.4 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 23/156 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++ FM A+E +N L P VG V V N +II ++ + HAE A Sbjct: 6 EQQLFFMRRAIELGENGRLSA-PPNPWVGCVIVKNGRIIGEGYHK--KKGQP--HAEEEA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + E + D+YVTLEPC C + ++ +Y +P G Sbjct: 61 VNS-----TTESIEGCDVYVTLEPCCHYGSTPPCVNLLIKHKVSTVYVALLDPDGRVSGK 115 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 G + +Y G+ ++ + ++ + +R Sbjct: 116 GIAALR----NAGIRVYVGLGKEEAESSLKSYIYQR 147 >gi|167619029|ref|ZP_02387660.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis Bt4] Length = 306 Score = 93.4 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL A P VG V V ++ +I + HAE+ A+ Sbjct: 4 ENDFTHMQRALALAARGMYTTTPNPRVGCVIVKDDVVIGEGFTQPAGQD----HAEVQAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + R L + +YVTLEPC CA A+ AR+ ++ +P G Sbjct: 60 KDA-RARGN-DLRDATVYVTLEPCSHFGRTPPCAHALIDARVGKVVAAMEDPNPQVSGRG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ + ++ F Sbjct: 118 LAMLRDAG----IDVRCGLLAHEAHEMNIGF 144 >gi|154706505|ref|YP_001424060.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Coxiella burnetii Dugway 5J108-111] gi|154355791|gb|ABS77253.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Coxiella burnetii Dugway 5J108-111] Length = 354 Score = 93.4 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 17/125 (13%) Query: 7 FMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 ++ AL A + VGAV V ++KIIS ++ HAE+ AI Sbjct: 8 YLKKALSLAEIRRGFCAPNPSVGAVVVKDDKIISTGFHKR----SGLPHAEVEAI----- 58 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + LYVTLEPC C I + I+ +YYG +P G + Sbjct: 59 KSLDDKARGAALYVTLEPCCHFGKTPPCTDLIIQSGIKAVYYGLHDPNLAVCGKGIEQLQ 118 Query: 119 LATCH 123 A + Sbjct: 119 RAGVN 123 >gi|170703035|ref|ZP_02893863.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria IOP40-10] gi|170132059|gb|EDT00559.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria IOP40-10] Length = 373 Score = 93.4 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 20/154 (12%) Query: 1 MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M F M AL A P VG V V + +I + HAE+ Sbjct: 1 MFSDTDFAHMQRALTLAARGMYTTAPNPRVGCVIVKDGNVIGEGFTQPAGQD----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++ + +YVTLEPC CA A+ AR+ ++ +P Sbjct: 57 QALKDA--RARGHDVAGSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A ++ G+ + ++ F Sbjct: 115 GRGLGMLRDAG----IDVRCGLLANEAGELNIGF 144 >gi|296136861|ref|YP_003644103.1| riboflavin biosynthesis protein RibD [Thiomonas intermedia K12] gi|295796983|gb|ADG31773.1| riboflavin biosynthesis protein RibD [Thiomonas intermedia K12] Length = 366 Score = 93.4 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 18/154 (11%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ FM AL+ A +A R P VG V V + +++ L HAE+ A+ Sbjct: 10 EQDQRFMRRALDLAHSAMYRTSPNPRVGCVLVRDGQVLGEGA----TLAAGQDHAEVQAV 65 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + + YVTLEPC CA ++ + R+ +P G Sbjct: 66 KQAWERGHEVR--GATTYVTLEPCAHHGRTPPCADLLATQGVARVVAALVDPNPLVAGQG 123 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 Q A ++ G+ +R+I F Sbjct: 124 LQRLRDAG----IQVDVGLFADEAREINLGFISR 153 >gi|289427738|ref|ZP_06429450.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes J165] gi|289159229|gb|EFD07421.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes J165] gi|313808724|gb|EFS47178.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL087PA2] gi|313817904|gb|EFS55618.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL046PA2] gi|313819816|gb|EFS57530.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL036PA1] gi|313823306|gb|EFS61020.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL036PA2] gi|313824948|gb|EFS62662.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL063PA1] gi|314925876|gb|EFS89707.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL036PA3] gi|314960753|gb|EFT04854.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL002PA2] gi|314979409|gb|EFT23503.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL072PA2] gi|314986170|gb|EFT30262.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL005PA2] gi|314988782|gb|EFT32873.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL005PA3] gi|315083284|gb|EFT55260.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL027PA2] gi|315086943|gb|EFT58919.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL002PA3] gi|315089869|gb|EFT61845.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL072PA1] gi|327325060|gb|EGE66866.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL096PA3] gi|327449258|gb|EGE95912.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL013PA2] gi|328756397|gb|EGF70013.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL020PA1] Length = 331 Score = 93.4 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 20/125 (16%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V +++I + +R T HAE+ A+R + + VTLEPC Sbjct: 28 VGCVIVAEDRVIGQGWHR----GAGTPHAEVEALRQAG-----DDVRGATAVVTLEPCHH 78 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C+ A+ A I R+ S+P T H E+ G+ + + Sbjct: 79 TGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRT-----HGVEVVTGVLSEEATA 133 Query: 140 IIQDF 144 + D+ Sbjct: 134 LNADW 138 >gi|284107199|ref|ZP_06386340.1| riboflavin biosynthesis protein RibD [Candidatus Poribacteria sp. WGA-A3] gi|283829946|gb|EFC34225.1| riboflavin biosynthesis protein RibD [Candidatus Poribacteria sp. WGA-A3] Length = 362 Score = 93.4 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 45/122 (36%), Gaps = 20/122 (16%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VGAV V + ++ +R HAEI+A+R + LY TLEPC Sbjct: 2 VGAVIVADGAVVGAGYHRRAGG----PHAEIVALRQA-----RTRSRGATLYTTLEPCCH 52 Query: 84 -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 C AI + +RR+ +P G + A + G + + Sbjct: 53 TNKRTPPCVPAILASGVRRIVLAMRDPNVQVAGRGIRQLRRAGL----SVDVGCLGKEAA 108 Query: 139 QI 140 Q+ Sbjct: 109 QL 110 >gi|254469111|ref|ZP_05082516.1| riboflavin biosynthesis protein RibD [Pseudovibrio sp. JE062] gi|211960946|gb|EEA96141.1| riboflavin biosynthesis protein RibD [Pseudovibrio sp. JE062] Length = 381 Score = 93.4 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 58/149 (38%), Gaps = 25/149 (16%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLN--NK--IISRAGNRNRELKDVTAHAEI 56 + FM+ AL A R PVGA+ + + I+ + +HAE+ Sbjct: 14 EHERFMAAALSYGIRAKGRTWPNPPVGAILTKDFGDGPVIVGQGATLPPGG----SHAEV 69 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 LAI+ E YVTLEPC CA A+ A + R+ YG ++P Sbjct: 70 LAIKDAG-----EHAKGATAYVTLEPCAHYGRTGPCARALVAAGVSRVVYGTADPNPAVA 124 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 G + E+ G+ E+ R+ Sbjct: 125 GRGKKILEEGG----VEVLIGVLEKECRE 149 >gi|83718892|ref|YP_442086.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis E264] gi|83652717|gb|ABC36780.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis E264] Length = 378 Score = 93.4 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL A P VG V V ++ +I + HAE+ A+ Sbjct: 4 ENDFTHMQRALALAARGMYTTTPNPRVGCVIVKDDVVIGEGFTQPAGQD----HAEVQAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + R L + +YVTLEPC CA A+ AR+ ++ +P G Sbjct: 60 KDA-RARGN-DLRDATVYVTLEPCSHFGRTPPCAHALIDARVGKVVAAMEDPNPQVSGRG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ + ++ F Sbjct: 118 LAMLRDAG----IDVRCGLLAHEAHEMNIGF 144 >gi|330445267|ref|ZP_08308919.1| riboflavin biosynthesis protein RibD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489458|dbj|GAA03416.1| riboflavin biosynthesis protein RibD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 374 Score = 93.4 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 53/151 (35%), Gaps = 21/151 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M A++ A+ P VG V +I+ + HAE+ A++ Sbjct: 6 DTRLMLRAIQLAKRGRFTTAPNPNVGCVIARGEEIVGEGFHYRAGE----PHAEVFALKQ 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ + I ++ +P G + Sbjct: 62 AGTLA-----KGATAYVTLEPCSHYGRTPPCAEALIKSGISKVICAMVDPNPMVAGRGVE 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A ++ G+ E+ ++ + F K Sbjct: 117 MLQKAG----IDVQVGLLEEEAQALNLGFIK 143 >gi|291244537|ref|XP_002742156.1| PREDICTED: tRNA-specific adenosine deaminase 3-like [Saccoglossus kowalevskii] Length = 381 Score = 93.4 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%) Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + DLY+T EPC MCA A+ +RI R++YG P G + + + +T + Sbjct: 302 GDKSGPYLCTGYDLYITHEPCIMCAMALVHSRINRVFYGIMCPN-GALGSRYKIHTQSGL 360 Query: 123 HHSPEIYPGISEQRSRQIIQ 142 +H E++ GI E Q+++ Sbjct: 361 NHHFEVFKGILELDCNQLLK 380 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 4/79 (5%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIR 60 K +M A+ A+ R + P+GAV V N ++I+ + + HA ++ I Sbjct: 167 KIQCYMEKAVAVAKTGKERGQAPIGAVIVDPINEEVIAVCHDLRNVGRHPFFHAAMICID 226 Query: 61 --MGCRILSQEILPEVDLY 77 + E Y Sbjct: 227 LVAASQGGGTYKYNEPGFY 245 >gi|312869208|ref|ZP_07729380.1| riboflavin biosynthesis protein RibD [Lactobacillus oris PB013-T2-3] gi|311095229|gb|EFQ53501.1| riboflavin biosynthesis protein RibD [Lactobacillus oris PB013-T2-3] Length = 352 Score = 93.4 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 38/158 (24%), Positives = 56/158 (35%), Gaps = 23/158 (14%) Query: 3 KGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M A+ A+ A + VGAV V N +++ + HAE R Sbjct: 2 NDEDLMGLAVAAAKQAGVATWRNPGVGAVVVKNGHVLATGHTQPYGG----PHAE----R 53 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 L+ LYVTLEPC C I + I+R+ +P G Sbjct: 54 DALSQLAPGQAAGATLYVTLEPCNHYGKQPPCTQLIIDSGIQRVVIAQLDPHALVTGKGV 113 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQD---FFKERR 149 HH E+ GI Q++ Q+ F++ R Sbjct: 114 AALR----HHGIEVVTGIGTQQAAQVNPHYNFFYRHHR 147 >gi|271964337|ref|YP_003338533.1| diaminohydroxyphosphoribosylaminopyrimidinedeami nase [Streptosporangium roseum DSM 43021] gi|270507512|gb|ACZ85790.1| Diaminohydroxyphosphoribosylaminopyrimidinedeami nase [Streptosporangium roseum DSM 43021] Length = 388 Score = 93.4 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 49/147 (33%), Gaps = 25/147 (17%) Query: 3 KGNVFMSCALEEAQNAALR---NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILA 58 M A+E A N + VG V + +++ + HAE++A Sbjct: 2 TDQAHMRRAIELAARGRGTTSPNPV-VGCVVLDAAGQVVGEGFHAYAGG----PHAEVVA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 +R E YVTLEPC CA A+ A I R+ +P Sbjct: 57 LRAAG-----ERARGGTAYVTLEPCDHTGRTGPCALALLEAGIARVVVAVRDPNPAAAGG 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQ 139 + H + G+ + + + Sbjct: 112 ADRLTR-----HGVAVTTGVLAEEAGR 133 >gi|317123798|ref|YP_004097910.1| CMP/dCMP deaminase zinc-binding protein [Intrasporangium calvum DSM 43043] gi|315587886|gb|ADU47183.1| CMP/dCMP deaminase zinc-binding protein [Intrasporangium calvum DSM 43043] Length = 160 Score = 93.4 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 56/156 (35%), Gaps = 11/156 (7%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 + F+ A+ A+ A R + P G+V V ++ NR D T H E R Sbjct: 6 RDLAFLRRAVGLARLALARGDEPFGSVLVSSEGDVLFEDHNRVVA-IDGTQHPEFAIARW 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA- 120 LS +Y + E C MC+AA + R+ Y AS+ + G Sbjct: 65 AGSHLSPSERAVATVYTSGEHCPMCSAAHGWVGLGRIAYAASSAQLGAWRAAWGLPDGPV 124 Query: 121 TCHHSPEIYPGI--------SEQRSRQIIQDFFKER 148 E+ PG E R + + F + R Sbjct: 125 RALPIREVVPGAVVDGPAPELEDEVRALHEAFARRR 160 >gi|312797040|ref|YP_004029962.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Burkholderia rhizoxinica HKI 454] gi|312168815|emb|CBW75818.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) [Burkholderia rhizoxinica HKI 454] Length = 382 Score = 93.4 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 49/149 (32%), Gaps = 18/149 (12%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M AL A+ VG V V + ++I + HAEI A++ Sbjct: 6 DRLQMQRALVLAERGLYTTSPNPRVGCVLVKDGEVIGEGFTQPAGQD----HAEICALKD 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA + A I R+ +P G Sbjct: 62 ARLRGHTP--AGATAYVTLEPCSHFGRTPPCANTLIEAGITRVIAAMEDPNPQVSGRGLA 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ ++++ F Sbjct: 120 SLRDAG----VDVRCGLLAHEAQELNVGF 144 >gi|149276501|ref|ZP_01882645.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil [Pedobacter sp. BAL39] gi|149233021|gb|EDM38396.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil [Pedobacter sp. BAL39] Length = 332 Score = 93.4 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 47/129 (36%), Gaps = 17/129 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ---EILPEVDLYVTLEP 82 VG V V KII + AHAE+ AI +L + YV+LEP Sbjct: 10 VGCVIVSEGKIIGEGYHEQFGA----AHAEVNAINSVWSAYPDQAAALLAQATAYVSLEP 65 Query: 83 C------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136 C CA + +++++ G +P G A E+ GI E+ Sbjct: 66 CAHFGKTPPCADLLIKNQLQKVVIGNRDPFPDVNGKGIAKLNAAG----IEVISGILEEE 121 Query: 137 SRQIIQDFF 145 + FF Sbjct: 122 CTALNIRFF 130 >gi|330447671|ref|ZP_08311319.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491862|dbj|GAA05816.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 146 Score = 93.4 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 53/142 (37%), Gaps = 21/142 (14%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM AL + A A R PVG V V + +I+S + HAE +A+ Sbjct: 6 QEQAFMMRALLLSHQALPACRPNPPVGCVLVKDGQIVSEGFTQRPGHH----HAEAMAL- 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E L +V YVTLEPC CA + I+++ +P G Sbjct: 61 ----ANYGESLDDVTAYVTLEPCSFVGRTPSCAHTLVERGIKKVVVATLDPDTRNSGKGI 116 Query: 115 QFYTLATCHHSPEIYPGISEQR 136 A E+ G+ E Sbjct: 117 AVLEQAG----VEVEVGLCENE 134 >gi|167580933|ref|ZP_02373807.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis TXDOH] Length = 378 Score = 93.4 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL A P VG V V ++ +I + HAE+ A+ Sbjct: 4 ENDFTHMQRALALAARGMYTTTPNPRVGCVIVKDDVVIGEGFTQPAGQD----HAEVQAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + R L + +YVTLEPC CA A+ AR+ ++ +P G Sbjct: 60 KDA-RARGN-DLRDATVYVTLEPCSHFGRTPPCAHALIDARVGKVVAAMEDPNPQVSGRG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ + ++ F Sbjct: 118 LAMLRDAG----IDVRCGLLAHEAHEMNIGF 144 >gi|264677369|ref|YP_003277275.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] gi|299533067|ref|ZP_07046453.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni S44] gi|262207881|gb|ACY31979.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni CNB-2] gi|298718952|gb|EFI59923.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni S44] Length = 170 Score = 93.4 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 52/142 (36%), Gaps = 16/142 (11%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A AQ A P GAV V ++ ++ N D HAE RM Sbjct: 22 LRRAQAVAQRATQMGHHPFGAVLVGPDQETVLMEQCN-----IDTVNHAESTLARMAATN 76 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGGIE-----NGTQF 116 + E L LY +EPC MCA A I R+ +G + + G + + Sbjct: 77 YTAEFLWSCTLYTNVEPCCMCAGTAYWANIGRIVFGMTEHRLLECTGSHGENPTMSVSSR 136 Query: 117 YTLATCHHSPEIYPGISEQRSR 138 Y C + E+ + E + Sbjct: 137 YVFDHCQKAVELIGPVPEMEAE 158 >gi|115350875|ref|YP_772714.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria AMMD] gi|115280863|gb|ABI86380.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Burkholderia ambifaria AMMD] Length = 373 Score = 93.4 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 20/154 (12%) Query: 1 MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M F M AL A P VG V V + +I + HAE+ Sbjct: 1 MFSDTDFAHMQRALTLAARGMYTTAPNPRVGCVIVKDGNVIGEGFTQPAGQD----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++ + +YVTLEPC CA A+ AR+ ++ +P Sbjct: 57 QALKDA--RARGHDVAGSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A ++ G+ + ++ F Sbjct: 115 GRGLGMLRDAG----IDVRCGLLANEAGELNIGF 144 >gi|56460970|ref|YP_156251.1| riboflavin-specific deaminase/reductase [Idiomarina loihiensis L2TR] gi|56179980|gb|AAV82702.1| Riboflavin-specific deaminase/reductase [Idiomarina loihiensis L2TR] Length = 375 Score = 93.4 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 53/152 (34%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAAL--RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M AL A+ + R VG V L +++ + HAE+ A+R Sbjct: 10 DHQMMHRALMLARRGLMTTRPNPAVGCVITLGTEVVGEGWHHQAGE----PHAEVHALRA 65 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + + YVTLEPC C A+ A ++R+ +P NG Q Sbjct: 66 AGQKV-----RGATAYVTLEPCSHIGRTPPCCDALIEAGVKRVVVAMQDPNPRVSGNGIQ 120 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ + + + F Sbjct: 121 RLKAAG----ISVDVGVLQLAAESLNPGFISR 148 >gi|254474256|ref|ZP_05087646.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Pseudovibrio sp. JE062] gi|211956630|gb|EEA91840.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Pseudovibrio sp. JE062] Length = 169 Score = 93.4 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 47/128 (36%), Gaps = 8/128 (6%) Query: 25 PVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P G +++++A + + D T H EI AIR+ P LY T EPC Sbjct: 31 PFGCAVYSSEGELLAQAYDSVIKECDPTCHGEINAIRLASETSKTRSFPGGILYSTCEPC 90 Query: 84 TMCAAAISLARIRRLYYGA-SNPKGGGI------ENGTQFYTLATCHHSPEIYPGISEQR 136 MC AA A L +GA +N I+ G+ Q Sbjct: 91 AMCMAATIWAGFDTLVFGAYTNEDATNFWPQEMNLRAKDLAASMVQRPEIAIFEGVERQA 150 Query: 137 SRQIIQDF 144 +Q+ D+ Sbjct: 151 CQQLFTDY 158 >gi|21229130|ref|NP_635052.1| deoxycytidylate deaminase [Methanosarcina mazei Go1] gi|20907690|gb|AAM32724.1| Deoxycytidylate deaminase [Methanosarcina mazei Go1] Length = 172 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 6/101 (5%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIR 60 M A+ AQ + P+G V + ++I+ + N + D H E AIR Sbjct: 19 SDRDIMCIAVLLAQKSYDEGGCPIGGVIIDSKTHRIVGKGHNTLVQDNDPYNHGETSAIR 78 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 R ++ TL PC +CA I + + R+ G Sbjct: 79 DAGRQ----DFSNATIFTTLSPCDVCATLIYMRQFDRVVIG 115 >gi|261365730|ref|ZP_05978613.1| riboflavin biosynthesis protein RibD [Neisseria mucosa ATCC 25996] gi|288565756|gb|EFC87316.1| riboflavin biosynthesis protein RibD [Neisseria mucosa ATCC 25996] Length = 365 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M AL A+ + P VG V +I+ + + HAE+ A+R Sbjct: 6 DTQMMQNALALARLGRFSTSPNPRVGCVIAHGGQIVGQGFHVKAGE----PHAEVHALRQ 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ + + R+ ++P G Sbjct: 62 AGEMA-----RGATAYVTLEPCSHYGRTPPCAEALISSGVSRVVAAMTDPNPLVAGKGLA 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E G+ E +R++ + F Sbjct: 117 MLEAAGI--RTE--SGLLEAEARELNRGF 141 >gi|256392530|ref|YP_003114094.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM 44928] gi|256358756|gb|ACU72253.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM 44928] Length = 143 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 1/99 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + A++ A +A + P G++ + I+ N R D+ AH E+ R Sbjct: 6 DETLLRRAIDIAAHAVTLGDAPYGSLLADADGTILIEEHNTVRRDGDIAAHPELKLARWA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 R LS E +Y + +PC MC I + + R+ Y Sbjct: 66 ARELSPEAAATTTMYTSCQPCGMCTGGIVRSGLGRVVYA 104 >gi|169772375|ref|XP_001820656.1| cytosine deaminase [Aspergillus oryzae RIB40] gi|83768517|dbj|BAE58654.1| unnamed protein product [Aspergillus oryzae] Length = 162 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 1/103 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 + ++ ++ A+ A + P G+V V K+I NR DVT H E ++ Sbjct: 4 ESDINYLRRCVDLAREALEAGDSPFGSVLVDAAGKVIYEDRNRTVTEADVTWHPEFTIVK 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + L+ +Y + E C MCAAA + A + R+ Y +S Sbjct: 64 WAQKNLTPTERAAATVYTSGEHCPMCAAAHANAGLGRIVYASS 106 >gi|172059887|ref|YP_001807539.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria MC40-6] gi|171992404|gb|ACB63323.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria MC40-6] Length = 373 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 52/154 (33%), Gaps = 20/154 (12%) Query: 1 MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M F M AL A P VG V V + +I + HAE+ Sbjct: 1 MFSDTDFAHMQRALTLAARGMYTTAPNPRVGCVIVKDGNVIGEGFTQPAGQD----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++ + +YVTLEPC CA A+ AR+ ++ +P Sbjct: 57 QALKDA--RARGHDVAGSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + ++ G+ + ++ F Sbjct: 115 GRGLGMLRDSG----IDVRCGLLANEAGELNIGF 144 >gi|126728506|ref|ZP_01744322.1| hypothetical protein SSE37_20987 [Sagittula stellata E-37] gi|126711471|gb|EBA10521.1| hypothetical protein SSE37_20987 [Sagittula stellata E-37] Length = 156 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 2/77 (2%) Query: 32 LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAIS 91 + +++R N D + HAEI+AI CR L L L TL+PC MC AI Sbjct: 37 RGDTLLARGANEVHLNHDPSRHAEIVAISAACRALGTADLSGCTLLTTLQPCEMCLGAIR 96 Query: 92 LARIRRLYYGASNPKGG 108 A I R+ + A KGG Sbjct: 97 FAGIGRVIFAAR--KGG 111 >gi|183222799|ref|YP_001840795.1| putative cytidine/adenosine deaminase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912831|ref|YP_001964386.1| cytosine/adenosine deaminase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777507|gb|ABZ95808.1| Cytosine/adenosine deaminase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781221|gb|ABZ99519.1| Putative cytidine/adenosine deaminase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 146 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 7/151 (4%) Query: 1 MKKGNVFMSC-ALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M F+ ++E ++ +NEIP + + ++S + N + + T H+EILA Sbjct: 1 MDFYESFLKRYSIEVSKY---KNEIPSYSEIITKDGNLVSSSFNSVEQTLNPTKHSEILA 57 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 I + L E L LEPC +CA A+ ++ + Y K G + + Sbjct: 58 IEKALSHVDGRYLSEHILITALEPCILCAGAVVRVKLPEVVYFLP-AKPGEGISSYTTES 116 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +H P+ I E R + FFKE+R Sbjct: 117 IYLLNHFPKCTL-IPESRIKFEFLSFFKEKR 146 >gi|90410896|ref|ZP_01218910.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium profundum 3TCK] gi|90328109|gb|EAS44420.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium profundum 3TCK] Length = 371 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 53/152 (34%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M A+E A+ P VG V + I+ + + HAE+ A+R Sbjct: 6 DHSMMLRAIELAKRGRFTTAPNPNVGCVIAQGSTIVGEGFH--YQAGQP--HAEVFALRA 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ A + R+ +P G + Sbjct: 62 AGEQT-----KGATAYVTLEPCSHFGRTPPCAQALINANVSRVVCAMVDPNPKVGGRGIE 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 +A E+ G+ ++ + F K Sbjct: 117 MLQIAG----IEVQTGLLAADAQALNPGFIKR 144 >gi|158336980|ref|YP_001518155.1| riboflavin biosynthesis protein RibD [Acaryochloris marina MBIC11017] gi|158307221|gb|ABW28838.1| riboflavin biosynthesis protein RibD [Acaryochloris marina MBIC11017] Length = 387 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 53/150 (35%), Gaps = 23/150 (15%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 M L+ AQ AA P VG V + +I+ + HAE+ A+R Sbjct: 23 HQQMMQRCLQLAQKAAGFT-TPNPLVGCVIERDGEIVGEGYHPKAGE----PHAEVFALR 77 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YV+LEPC C+ A+ A + + G +P G Sbjct: 78 AAGDKA-----KGATAYVSLEPCNHFGRTPPCSEALVKAGVATVVVGMVDPDPRVSGKGI 132 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A ++ G+ E +++ + F Sbjct: 133 ERLRAAG----IQVITGVEEADCQRVNEAF 158 >gi|157146970|ref|YP_001454289.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Citrobacter koseri ATCC BAA-895] gi|157084175|gb|ABV13853.1| hypothetical protein CKO_02747 [Citrobacter koseri ATCC BAA-895] Length = 367 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ AL+ AQ + P VG V V + +I+ + HAE+ A+RM Sbjct: 3 DEFYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGE----PHAEVHALRM 58 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC C A+ A + R+ +P G Sbjct: 59 AGDKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLY 113 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 114 RLQQAG----IDVSHGLMMSETEQLNKGFLKRMR 143 >gi|269837993|ref|YP_003320221.1| riboflavin biosynthesis protein RibD [Sphaerobacter thermophilus DSM 20745] gi|269787256|gb|ACZ39399.1| riboflavin biosynthesis protein RibD [Sphaerobacter thermophilus DSM 20745] Length = 387 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 49/129 (37%), Gaps = 21/129 (16%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +M AL+ A A+ R + P VGAV V + +++ AHAEI+A Sbjct: 12 TDLHWMRRALDLA--ASARGRVAPNPAVGAVLVRDGRLVGEGA----TEPPPGAHAEIVA 65 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R + LYVTLEPC C A+ A I R +P Sbjct: 66 LRQAGALA-----RGATLYVTLEPCAHYGRTPPCVDALIAAGIARAVVALRDPYPAVNGR 120 Query: 113 GTQFYTLAT 121 G + A Sbjct: 121 GLRLLAEAG 129 >gi|222085509|ref|YP_002544039.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine deaminase protein [Agrobacterium radiobacter K84] gi|221722957|gb|ACM26113.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine deaminase protein [Agrobacterium radiobacter K84] Length = 371 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 49/154 (31%), Gaps = 26/154 (16%) Query: 3 KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM+ A+ ++ VG V V + +I R HAE A+ Sbjct: 8 DDERFMAAAIRLSRWHLGLTSTNPSVGCVIVKDGAVIGRGVTAVGGR----PHAETQALA 63 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC C+ A+ + R+ ++P G Sbjct: 64 DAGEAA-----RGATAYVTLEPCSHYGKTPPCSEALIAYGVARVVISVTDPDQRVSGRGI 118 Query: 115 QFYTLATCHHSPEIYPGISEQR-----SRQIIQD 143 A E+ GI E+ + +++ Sbjct: 119 AMLRDAG----IEVDIGILEEEGRHSLAGYLMRQ 148 >gi|2766596|gb|AAB95439.1| homologue of Bacillus subtilis ribG [Shigella flexneri] Length = 245 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+R Sbjct: 2 QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ Q+ + F K R Sbjct: 113 YRLQQAG----IDVSHGLMMSEPEQLNKGFLKRMR 143 >gi|322797886|gb|EFZ19783.1| hypothetical protein SINV_80092 [Solenopsis invicta] Length = 423 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 43/81 (53%) Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + + ++ +EPC +CA A+ +R+ R++YG +N G + + T +T+ Sbjct: 335 AKKCGPYLCTGYWAFLLVEPCPLCAMALLHSRVARIFYGTANESAGVLGSRTVLHTVPGL 394 Query: 123 HHSPEIYPGISEQRSRQIIQD 143 +H ++ GI E+ RQ +++ Sbjct: 395 NHRYRVWSGILERECRQALEE 415 Score = 34.9 bits (80), Expect = 3.7, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 8/77 (10%) Query: 5 NVFMSCALEEAQNAALRNEIPVGA-VAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 MS +E A+ A+ +E GA V V + +I++ A R K HA +LA+ + Sbjct: 169 ERIMSLVIEAAKLEAIGDERCTGATVIVDPEDGRILAVA--AARLDKHPMWHAAMLAVDL 226 Query: 62 GCRILSQ--EILP-EVD 75 R+ L + D Sbjct: 227 IARLHGGGAWELNEDCD 243 >gi|282855094|ref|ZP_06264426.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes J139] gi|282581682|gb|EFB87067.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes J139] Length = 331 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 20/125 (16%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V +++I + +R T HAE+ A+R + VTLEPC Sbjct: 28 VGCVIVAEDRVIGQGWHR----GAGTPHAEVEALRQAG-----DDARGATAVVTLEPCHH 78 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C+ A+ A I R+ S+P T H E+ G+ + + Sbjct: 79 TGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRT-----HGVEVVTGVLSEEATA 133 Query: 140 IIQDF 144 + D+ Sbjct: 134 LNADW 138 >gi|254459689|ref|ZP_05073105.1| riboflavin biosynthesis protein RibD [Rhodobacterales bacterium HTCC2083] gi|206676278|gb|EDZ40765.1| riboflavin biosynthesis protein RibD [Rhodobacteraceae bacterium HTCC2083] Length = 364 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 50/151 (33%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL A+ R VG V V +I+ R + HAE++A+ Sbjct: 4 SDQAYMKMALSLARRGLGRTWPNPAVGCVIVNAGRIVGRGWTQVGGR----PHAEVVALV 59 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC C+ A+ A I R+ + G Sbjct: 60 QAGK-----RANGATAYVTLEPCAHHGQTPPCSEALIEAGIARVVAAMEDSDPRVSGRGF 114 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A + GI + + + FF Sbjct: 115 AQLRGAG----VVVETGICAKDAAESNAGFF 141 >gi|317054543|ref|YP_004118568.1| CMP/dCMP deaminase zinc-binding protein [Pantoea sp. At-9b] gi|316952538|gb|ADU72012.1| CMP/dCMP deaminase zinc-binding protein [Pantoea sp. At-9b] Length = 158 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRM 61 F+ + E + A + P GAV V ++ ++ N D HAE R+ Sbjct: 6 DIHFLRLSNEVGRRAIALGKHPFGAVLVAPDQQTVLLTQCN-----IDTVNHAESTLARI 60 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 S E L + LY +EPC MCA I A I R+ +G S + Sbjct: 61 AATNFSAEYLWQCTLYTAVEPCCMCAGTIYWANIGRVVFGMSETRLLAC 109 >gi|327332327|gb|EGE74063.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL097PA1] Length = 331 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 20/125 (16%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V +++I + +R T HAE+ A+R + VTLEPC Sbjct: 28 VGCVIVAEDRVIGQGWHR----GAGTPHAEVEALRQAG-----DDARGATAVVTLEPCHH 78 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C+ A+ A I R+ S+P T H E+ G+ + + Sbjct: 79 TGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRT-----HGVEVVTGVLSEEATA 133 Query: 140 IIQDF 144 + D+ Sbjct: 134 LNADW 138 >gi|50843212|ref|YP_056439.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes KPA171202] gi|50840814|gb|AAT83481.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes KPA171202] gi|315106176|gb|EFT78152.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL030PA1] Length = 331 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 20/125 (16%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V +++I + +R T HAE+ A+R + VTLEPC Sbjct: 28 VGCVIVAEDRVIGQGWHR----GAGTPHAEVEALRQAG-----DDARGATAVVTLEPCHH 78 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C+ A+ A I R+ S+P T H E+ G+ + + Sbjct: 79 TGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRT-----HGVEVVTGVLSEEATA 133 Query: 140 IIQDF 144 + D+ Sbjct: 134 LNADW 138 >gi|271499575|ref|YP_003332600.1| riboflavin biosynthesis protein RibD [Dickeya dadantii Ech586] gi|270343130|gb|ACZ75895.1| riboflavin biosynthesis protein RibD [Dickeya dadantii Ech586] Length = 370 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ ALE A+ P VG V V + +I+ ++ HAE+ A+R Sbjct: 5 SDEFYMARALELARRGRFTTAPNPNVGCVIVRDGEIVGEGYHQKAGE----PHAEVHALR 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC CA A+ A + R+ +P G Sbjct: 61 MAGDKA-----RGATAYVTLEPCSHHGRTPPCADALVAAGVARVVAAMQDPNPQVAGRGL 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ ++ +I + F K R Sbjct: 116 HRLQQAG----IAVQHGVLMDQAEKINRGFLKRMR 146 >gi|289424953|ref|ZP_06426732.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes SK187] gi|289154652|gb|EFD03338.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes SK187] gi|313763122|gb|EFS34486.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL013PA1] gi|313793372|gb|EFS41430.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL110PA1] gi|313800984|gb|EFS42252.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL110PA2] gi|313812185|gb|EFS49899.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL025PA1] gi|313814722|gb|EFS52436.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL059PA1] gi|313828278|gb|EFS65992.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL063PA2] gi|313838062|gb|EFS75776.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL086PA1] gi|314914448|gb|EFS78279.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL005PA4] gi|314917772|gb|EFS81603.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL050PA1] gi|314919502|gb|EFS83333.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL050PA3] gi|314930094|gb|EFS93925.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL067PA1] gi|314957061|gb|EFT01166.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL027PA1] gi|314957695|gb|EFT01798.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL002PA1] gi|314963428|gb|EFT07528.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL082PA1] gi|314968931|gb|EFT13029.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL037PA1] gi|315077277|gb|EFT49339.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL053PA2] gi|315079956|gb|EFT51932.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL078PA1] gi|315097872|gb|EFT69848.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL059PA2] gi|315100736|gb|EFT72712.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL046PA1] gi|315109263|gb|EFT81239.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL030PA2] gi|327451322|gb|EGE97976.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL087PA3] gi|327451701|gb|EGE98355.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL092PA1] gi|327452164|gb|EGE98818.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL083PA2] gi|328752420|gb|EGF66036.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL087PA1] gi|328755093|gb|EGF68709.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL025PA2] Length = 331 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 20/125 (16%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V +++I + +R T HAE+ A+R + VTLEPC Sbjct: 28 VGCVIVAEDRVIGQGWHR----GAGTPHAEVEALRQAG-----DDARGATAVVTLEPCHH 78 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C+ A+ A I R+ S+P T H E+ G+ + + Sbjct: 79 TGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRT-----HGVEVVTGVLSEEATA 133 Query: 140 IIQDF 144 + D+ Sbjct: 134 LNADW 138 >gi|227821532|ref|YP_002825502.1| riboflavin biosynthesis protein RibD [Sinorhizobium fredii NGR234] gi|227340531|gb|ACP24749.1| riboflavin biosynthesis protein RibD [Sinorhizobium fredii NGR234] Length = 367 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 54/156 (34%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ FM+ AL A+ VG V V ++ I+ RA HAE A+ Sbjct: 6 REDERFMAAALRLARRNLGLTSTNPSVGCVIVKDDTIVGRA----VTAPGGRPHAETQAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 E YVTLEPC C A+ + I R+ +P G Sbjct: 62 ADAG-----EQARGATAYVTLEPCSHHGRTPPCVDALIASGIARVVVCLLDPDERVAGRG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ ++++ + +R Sbjct: 117 VVMLRDAG----IDVDLGVLRDEGERVLEAYLMRQR 148 >gi|228475866|ref|ZP_04060576.1| riboflavin biosynthesis protein RibD [Staphylococcus hominis SK119] gi|314936136|ref|ZP_07843483.1| riboflavin biosynthesis protein RibD [Staphylococcus hominis subsp. hominis C80] gi|228270021|gb|EEK11491.1| riboflavin biosynthesis protein RibD [Staphylococcus hominis SK119] gi|313654755|gb|EFS18500.1| riboflavin biosynthesis protein RibD [Staphylococcus hominis subsp. hominis C80] Length = 347 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 24/150 (16%) Query: 7 FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++ AQ + + PVG+V V + +I+ + + K HAE+ A+ M Sbjct: 4 FMKYAIQLAQMVEGQTGVNPPVGSVVVKDGRIVGLGAHLKQGEK----HAEVQALDMA-- 57 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 Q+ +Y++LEPC C I + ++ Y + + + Sbjct: 58 ---QDKAKGGTIYISLEPCTHYGSTPPCVNKIIEHGLSKVIYAVKDTT---LSSEGDIIL 111 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148 E+ + + + +DFFK + Sbjct: 112 EKA---GIEVEYQY-SEEAFALYEDFFKAK 137 >gi|148262423|ref|YP_001229129.1| CMP/dCMP deaminase, zinc-binding [Geobacter uraniireducens Rf4] gi|146395923|gb|ABQ24556.1| CMP/dCMP deaminase, zinc-binding protein [Geobacter uraniireducens Rf4] Length = 196 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 11/148 (7%) Query: 8 MSCALEEAQNAALRN-EIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M +E ++ P GA V + ++I+ N HAE +A+ + Sbjct: 32 MRFVIELSRQNVRHGTGGPFGAAVFDSDGQLIAPGINMVVISNCSLLHAETVALACAQKA 91 Query: 66 LSQEILPE-----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN--GTQFYT 118 L + + DL+ T EPC MC AI + +RRL GA + I G + Sbjct: 92 LGRYDIGNGGRLRYDLFATTEPCAMCFGAIPWSGVRRLVCGARDADARAIGFDEGPKLAD 151 Query: 119 -LATCHHS-PEIYPGISEQRSRQIIQDF 144 +A + + + + ++Q++ Sbjct: 152 WVAALNARGITVLRDVLRNEAVAVLQEY 179 >gi|56475984|ref|YP_157573.1| riboflavin biosynthesis bifunctional RIBD: diaminohydroxyphosphoribosylaminopyrimid ine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase oxidoreductase protein [Aromatoleum aromaticum EbN1] gi|56312027|emb|CAI06672.1| riboflavin biosynthesis bifunctional RIBD: diaminohydroxyphosphoribosylaminopyrimid ine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase oxidoreductase protein [Aromatoleum aromaticum EbN1] Length = 366 Score = 92.7 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 53/152 (34%), Gaps = 23/152 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + +V M+ AL+ A+ P VG V + I+ +R HAE++A Sbjct: 5 EADHVAMARALQLAERGLETT-TPNPRVGCVLMKEGSIVGEGWHRRAGE----PHAEVIA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R YVTLEPC CA A+ A + R+ +P Sbjct: 60 LRAAGDTA-----RGATAYVTLEPCTHHGRTPPCADALIAAGVTRVVAAMEDPNPLVAGT 114 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A + G+ + ++ F Sbjct: 115 GVGRLRAAGL----AVTTGLLASDAHELNIGF 142 >gi|28210395|ref|NP_781339.1| riboflavin biosynthesis protein [Clostridium tetani E88] gi|28202832|gb|AAO35276.1| riboflavin biosynthesis protein [Clostridium tetani E88] Length = 380 Score = 92.7 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 57/154 (37%), Gaps = 21/154 (13%) Query: 1 MKKGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M ++M A+E A N P VGAV V + +II ++ AHAEI A Sbjct: 19 MNLDEIYMKRAIELAHLGEGYVNPNPLVGAVIVKDGRIIGEGYHKKFGE----AHAEIEA 74 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +E LYV LEPC C I I+++ G +P Sbjct: 75 F-----KSCKEDPKGGTLYVNLEPCSHYGKTPPCVDVIIKKGIKKVIIGMKDPNPLVAGR 129 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 G + A E+ G E R + + F K Sbjct: 130 GLEILKKAN----IEVRVGTLEDECRNLNEIFIK 159 >gi|329848658|ref|ZP_08263686.1| riboflavin biosynthesis protein ribD [Asticcacaulis biprosthecum C19] gi|328843721|gb|EGF93290.1| riboflavin biosynthesis protein ribD [Asticcacaulis biprosthecum C19] Length = 299 Score = 92.7 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 49/148 (33%), Gaps = 22/148 (14%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-HAEILAIRMGC 63 FM A+ A+ VG V V ++ ++ D HAE A+ M Sbjct: 99 EPFMRQAIALARPGHTWPNPAVGCVLVKDDVVVGEG-----ATGDGGRPHAEENALDMAG 153 Query: 64 RILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + YVTLEPC C+ + A + R+ Y +P G Q Sbjct: 154 DVA-----RGATAYVTLEPCGKRSTGCASCSERLVAAGVARVVYACDDPSPFASHVGPQR 208 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + G+ + +I F Sbjct: 209 LRDAG----ITVEAGLLHDEAAHLIAPF 232 >gi|221201163|ref|ZP_03574203.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans CGD2M] gi|221206384|ref|ZP_03579397.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans CGD2] gi|221213661|ref|ZP_03586635.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans CGD1] gi|221166450|gb|EED98922.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans CGD1] gi|221173693|gb|EEE06127.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans CGD2] gi|221179013|gb|EEE11420.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans CGD2M] Length = 373 Score = 92.7 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 53/154 (34%), Gaps = 20/154 (12%) Query: 1 MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M F M AL A P VG V V + ++I + HAE+ Sbjct: 1 MFSDIDFAHMQRALALAARGMYTTTPNPRVGCVIVKHGEVIGEGHTQPPGQD----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++ + +YVTLEPC CA A+ AR+ ++ +P Sbjct: 57 QALKDA--RARGHDVAGSTVYVTLEPCSHFGRTPPCANALIEARVAKVVAAMEDPNPLVS 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A ++ G+ + ++ F Sbjct: 115 GRGLGMLRDAG----IDVRCGLLAHEAGELNIGF 144 >gi|116623314|ref|YP_825470.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine deaminase [Candidatus Solibacter usitatus Ellin6076] gi|116226476|gb|ABJ85185.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Candidatus Solibacter usitatus Ellin6076] Length = 369 Score = 92.7 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 51/138 (36%), Gaps = 24/138 (17%) Query: 7 FMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M AL+ A+ P VGAV V + K++ R + L HAEI+A+ Sbjct: 5 YMREALDLARKGRSLASPNPLVGAVIVRDGKVVGRGFHTYAGLH----HAEIIALAQAG- 59 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 E ++Y+ LEPC C A+ A I R+ S+P G Sbjct: 60 ----EQARGAEIYLNLEPCSHQGRTPPCVDALIRAGIARVVAPLSDPNPLVAGQGFARLR 115 Query: 119 LATCHHSPEIYPGISEQR 136 A E+ + Sbjct: 116 EAG----IEV---VMADE 126 >gi|88608126|ref|YP_506383.1| riboflavin biosynthesis protein RibD [Neorickettsia sennetsu str. Miyayama] gi|88600295|gb|ABD45763.1| riboflavin biosynthesis protein RibD [Neorickettsia sennetsu str. Miyayama] Length = 372 Score = 92.7 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 21/140 (15%) Query: 6 VFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A+ + + VG + V +++++ + + + HAE +A+++ Sbjct: 12 YYMEAAVNASLFGQGFTADNPSVGCIIVKDDEVVGKG----VTGINGSPHAEAVALKVAG 67 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 DLY TLEPC C I + I+ ++ G +P G Q Sbjct: 68 IKA-----RGADLYTTLEPCAHHGRTAPCTDLIIESGIKNVFIGTRDPDTRVNGKGIQKL 122 Query: 118 TLATCHHSPEIYPGISEQRS 137 + + GI ++ Sbjct: 123 QESG----IVVTTGILKREC 138 >gi|27380142|ref|NP_771671.1| riboflavin biosynthesis protein [Bradyrhizobium japonicum USDA 110] gi|27353296|dbj|BAC50296.1| riboflavin biosynthesis protein [Bradyrhizobium japonicum USDA 110] Length = 382 Score = 92.7 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 49/154 (31%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL + R VGAV V + I+ R + H E A+R Sbjct: 21 DRRFMQLALALGRRGQGRTWPNPAVGAVIVKDGVIVGRGWTQPGGR----PHGEPEALRR 76 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 LYVTLEPC CA A+ A I+R+ +P G Sbjct: 77 AGEAA-----RGATLYVTLEPCSHFGKSPPCADAVIAAGIKRVVAAIEDPNPEVAGQGHA 131 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + F+ R Sbjct: 132 RLRAAG----ITVDVGLCAAEAAFDHAGHFRRIR 161 >gi|212703995|ref|ZP_03312123.1| hypothetical protein DESPIG_02048 [Desulfovibrio piger ATCC 29098] gi|212672588|gb|EEB33071.1| hypothetical protein DESPIG_02048 [Desulfovibrio piger ATCC 29098] Length = 188 Score = 92.7 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 6/99 (6%) Query: 4 GNVFMSCALEEAQNAALRN-EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61 M A+E A+ L P GA+ +++S A N +D T HAE+ A+R Sbjct: 28 HRRHMLAAIEAAREGMLSGKGGPFGALITDPAGRVVSVACNEVLASRDCTMHAEVAALRK 87 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + L LY T PC MC AI +R+ LYY Sbjct: 88 VGHL----DLRGHTLYATGFPCVMCLGAILWSRVSTLYY 122 >gi|313669033|ref|YP_004049317.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/phosphoribosylaminouracil reductase [Neisseria lactamica ST-640] gi|313006495|emb|CBN87958.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase/phosphoribosylaminouracil reductase [Neisseria lactamica 020-06] Length = 369 Score = 92.7 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL+ A + P VG V +I+ + + HAE+ A+ Sbjct: 4 ETDISMMQNALKLAALGRFSTSPNPRVGCVIAQGGQIVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + +VTLEPC CA A+ A + R+ +P G Sbjct: 60 RQAGEMA-----KGATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVVAMRDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E +R++ + F + RR Sbjct: 115 LALLEAAGI--KTEC--GLLESEARELNRGFLSRIERRR 149 >gi|242347654|gb|ACS92631.1| conserved hypothetical protein [Triticum aestivum] Length = 396 Score = 92.7 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 57/149 (38%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M ++ A+ AA P VG V V +++ + K HAE+ A+R Sbjct: 52 DAHYMRRCVDLARTAAGHTSPNPMVGCVIVREGEVVGEGFH----PKAGQPHAEVFALRD 107 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YV+LEPC C A+ A+I+ + G ++P G + Sbjct: 108 AGDLAEN-----ATAYVSLEPCNHYGRTPPCTEALIKAKIKEVVVGMTDPNPIVASKGIE 162 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ G+ E ++ + + Sbjct: 163 KLR----NAGIDVRVGVEEALCLRLNEAY 187 >gi|83717489|ref|YP_439477.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis E264] gi|257142602|ref|ZP_05590864.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis E264] gi|83651314|gb|ABC35378.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis E264] Length = 389 Score = 92.7 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 53/152 (34%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M+ AL A+ VG V + + +R HAE+ A+R Sbjct: 8 DRMHMAHALRLAEQGLYTTHPNPRVGCVIARGAQTLGAGWHRRAGE----PHAEVHALRE 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ A +P G Sbjct: 64 AG-----ERARGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAA 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E ++R++ FF Sbjct: 119 RLADAG----IVVEQGLLEAQARELNIGFFSR 146 >gi|326520824|dbj|BAJ92775.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 468 Score = 92.7 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M +E A+ AA P VG V V K++ + K HAE+ A+R Sbjct: 124 DAHYMRRCVELARTAAGHTSPNPMVGCVIVREGKVVGEGFH----PKAGQPHAEVFALRD 179 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YV+LEPC C+ A+ A+++ + G ++P G + Sbjct: 180 AGDLAEN-----ATAYVSLEPCNHYGRTPPCSEALIKAKVKEVVVGMTDPNPIVASKGIE 234 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + ++ G+ E ++ + + Sbjct: 235 KLR----NAGIDVRVGVEEALCLRLNEAY 259 >gi|295131277|ref|YP_003581940.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes SK137] gi|291375861|gb|ADD99715.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes SK137] gi|313773159|gb|EFS39125.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL074PA1] gi|313810307|gb|EFS48023.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL083PA1] gi|313830202|gb|EFS67916.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL007PA1] gi|313833124|gb|EFS70838.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL056PA1] gi|314972940|gb|EFT17036.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL053PA1] gi|314975459|gb|EFT19554.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL045PA1] gi|314984254|gb|EFT28346.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL005PA1] gi|315096643|gb|EFT68619.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL038PA1] gi|327325313|gb|EGE67118.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL096PA2] gi|327443828|gb|EGE90482.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL043PA1] gi|327449140|gb|EGE95794.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL043PA2] gi|328761071|gb|EGF74621.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL099PA1] Length = 331 Score = 92.7 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 20/125 (16%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V +++I + +R T HAE+ A+R + VTLEPC Sbjct: 28 VGCVIVAEDRVIGQGWHR----GAGTPHAEVEALRQAG-----DDARGATAVVTLEPCHH 78 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C+ A+ A I R+ S+P T H E+ G+ + + Sbjct: 79 TGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRT-----HGVEVVTGVLSEEATA 133 Query: 140 IIQDF 144 + D+ Sbjct: 134 LNADW 138 >gi|314982172|gb|EFT26265.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL110PA3] gi|315090403|gb|EFT62379.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes HL110PA4] Length = 331 Score = 92.7 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 20/125 (16%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 VG V V +++I + +R T HAE+ A+R + VTLEPC Sbjct: 28 VGCVIVAEDRVIGQGWHR----GAGTPHAEVEALRQAG-----DDARGATAVVTLEPCHH 78 Query: 86 ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C+ A+ A I R+ S+P T H E+ G+ + + Sbjct: 79 TGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRT-----HGVEVVTGVLSEEATA 133 Query: 140 IIQDF 144 + D+ Sbjct: 134 LNADW 138 >gi|269302657|gb|ACZ32757.1| riboflavin biosynthesis protein RibD [Chlamydophila pneumoniae LPCoLN] Length = 376 Score = 92.7 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 58/150 (38%), Gaps = 23/150 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++ FM A+E + + P VG V V N+II + HAE LA Sbjct: 6 EQQLFFMRRAIEIGEKGRITA-PPNPWVGCVVVQENRIIGEGFHAYAGG----PHAEELA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I+ + D+YV+LEPC CA + ++ R++ +P Sbjct: 61 IQNASMPI-----SGSDVYVSLEPCSHFGSRPPCANLLIKYKVSRVFVALVDPDPKVAGQ 115 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 G A ++Y GI E ++ +Q Sbjct: 116 GIAMLRQAG----IQVYVGIGESEAQASLQ 141 >gi|215918961|ref|NP_819453.2| guanine deaminase [Coxiella burnetii RSA 493] gi|206583846|gb|AAO89967.2| guanine deaminase [Coxiella burnetii RSA 493] Length = 168 Score = 92.7 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 41/113 (36%), Gaps = 22/113 (19%) Query: 25 PVGAVAV----LNNKIISR--AGNRNRELKDVTAHAEILAIRMGCRILSQEIL------- 71 P GAV V + ++ N + + D TAHAE+ IR R L+ L Sbjct: 14 PFGAVIVQIDDKSGRVFRYWVDHNHSVDWHDPTAHAEMSVIRKAARELNVTDLGHIRKED 73 Query: 72 ---------PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +Y + EPC MC AAI A I L + A+ Sbjct: 74 SKLSQPSEWSHCVIYSSAEPCPMCMAAIYWAGIHYLVFSATRYDTAAPGVNWD 126 >gi|161525607|ref|YP_001580619.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans ATCC 17616] gi|189349664|ref|YP_001945292.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Burkholderia multivorans ATCC 17616] gi|160343036|gb|ABX16122.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans ATCC 17616] gi|189333686|dbj|BAG42756.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Burkholderia multivorans ATCC 17616] Length = 373 Score = 92.7 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 53/154 (34%), Gaps = 20/154 (12%) Query: 1 MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M F M AL A P VG V V + ++I + HAE+ Sbjct: 1 MFSDIDFAHMQRALALAARGMYTTTPNPRVGCVIVKHGEVIGEGHTQPPGQD----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++ + +YVTLEPC CA A+ AR+ ++ +P Sbjct: 57 QALKDA--RARGHDVAGSTVYVTLEPCSHFGRTPPCANALIEARVAKVVAAMEDPNPLVS 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A ++ G+ + ++ F Sbjct: 115 GRGLGMLRDAG----IDVRCGLLAHEAGELNIGF 144 >gi|167837547|ref|ZP_02464430.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis MSMB43] Length = 374 Score = 92.7 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL A P VG V V ++ +I + HAE+ A+ Sbjct: 4 ESDFTHMQRALALAARGMYTTTPNPRVGCVIVKDDVVIGEGFTQPAGQD----HAEVQAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + R L + +YVTLEPC C+ A+ AR+ ++ +P G Sbjct: 60 KDA-RARGN-DLRDATVYVTLEPCSHFGRTPPCSHALIDARVGKVVAAMEDPNPQVSGRG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ + ++ F Sbjct: 118 LAMLRDAG----IDVRCGLLAHEAHEMNIGF 144 >gi|325522583|gb|EGD01124.1| pyrimidine deaminase [Burkholderia sp. TJI49] Length = 221 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 52/154 (33%), Gaps = 20/154 (12%) Query: 1 MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M F M AL A P VG V V +I + D HAE+ Sbjct: 1 MFSDIDFAHMQRALALAARGMYTTTPNPRVGCVIVKGGDVIGEGYTQP-AGHD---HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++ + +YVTLEPC CA A+ AR+ ++ +P Sbjct: 57 QALKDA--RARGHDVAGSTVYVTLEPCSHFGRTPPCANALIEARVAKVVAAMEDPNPQVS 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A ++ G+ + ++ F Sbjct: 115 GRGLGMLRDAG----IDVRCGLLAHEAGELNIGF 144 >gi|218296564|ref|ZP_03497292.1| riboflavin biosynthesis protein RibD [Thermus aquaticus Y51MC23] gi|218243106|gb|EED09638.1| riboflavin biosynthesis protein RibD [Thermus aquaticus Y51MC23] Length = 377 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 56/159 (35%), Gaps = 25/159 (15%) Query: 1 MKK-GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M+ F+ AL+ A+ A P VGAV V + +I+ + HA Sbjct: 1 MRDLDERFLRRALQIAERARGHT-HPNPLVGAVVVRDGEIVGEGYHPRAGA----PHA-- 53 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 + E +YV+LEPC C+ A+ A + R+ A +P Sbjct: 54 ---EALALEAAGERARGATVYVSLEPCDHHGRTPPCSLALIRAGVARVVLAARDPNPLAQ 110 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + G+ E+ ++ + FF R Sbjct: 111 GGMARLLAA-----GVAVEAGLLEEEAQDQNEAFFTALR 144 >gi|78212460|ref|YP_381239.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Synechococcus sp. CC9605] gi|78196919|gb|ABB34684.1| riboflavin biosynthesis protein RibD [Synechococcus sp. CC9605] Length = 349 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 48/131 (36%), Gaps = 20/131 (15%) Query: 26 VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83 VGAV + +++ + AHAE+ A+R L VTLEPC Sbjct: 21 VGAVVLDCEGRLVGEGFHARAGD----AHAEVGALRQAGDAAQ-----GGTLVVTLEPCC 71 Query: 84 -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 C+ A+ A I R+ +P G + A E+ G+ + +R Sbjct: 72 HHGRTPPCSEAVLRAGIGRVVIALEDPDPRVDGGGIRQLRQAGL----EVISGVLREEAR 127 Query: 139 QIIQDFFKERR 149 Q + F R Sbjct: 128 QQNRAFLHRVR 138 >gi|294788324|ref|ZP_06753567.1| riboflavin biosynthesis protein RibD [Simonsiella muelleri ATCC 29453] gi|294483755|gb|EFG31439.1| riboflavin biosynthesis protein RibD [Simonsiella muelleri ATCC 29453] Length = 363 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 60/157 (38%), Gaps = 24/157 (15%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M ALE A + P VG V +I+ + + + + HAE+ A+R Sbjct: 9 DHAHMHRALELAWQGRFSTSPNPRVGCVIAHGEQIVGQGFH--VKAGEP--HAEVHALRQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA ++ + + R+ +P G Sbjct: 65 AGSLAQ-----GATAYVTLEPCAHYGRTPPCAESLRESGVARVVAAMRDPNPLVAGKGLA 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 T A + G+ E ++R++ + F + +R Sbjct: 120 ILTAAG----VLVECGLLEHKARELNRGFLSRIERKR 152 >gi|76819539|ref|YP_335244.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 1710b] gi|76584012|gb|ABA53486.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 1710b] Length = 454 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 51/152 (33%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M+ AL A+ VG V + + +R HAE+ A+R Sbjct: 67 DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALRE 122 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ A +P G Sbjct: 123 AG-----ERARGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAA 177 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ ++R++ FF Sbjct: 178 RLADAG----IVVEQGLLAAQARELNIGFFSR 205 >gi|119384301|ref|YP_915357.1| riboflavin biosynthesis protein RibD [Paracoccus denitrificans PD1222] gi|119374068|gb|ABL69661.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Paracoccus denitrificans PD1222] Length = 325 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 25/147 (17%) Query: 8 MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M AL A+ + P VG V V + ++ R + HAE +A+ Sbjct: 1 MRHALALARRGL--GNVWPNPAVGCVLVRDGVVVGRGWTQPGGR----PHAEAMALAQAG 54 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 YVTLEPC CA A+ + + R+ ++P G Sbjct: 55 EAA-----RGATAYVTLEPCAHHGKTPPCAEALVRSGMARVVTALTDPDPRVTGRGHAIL 109 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E +R++ + F Sbjct: 110 RAAG----IEVAEGVCEAEAREVQRGF 132 >gi|83859882|ref|ZP_00953402.1| riboflavin biosynthesis protein RibD [Oceanicaulis alexandrii HTCC2633] gi|83852241|gb|EAP90095.1| riboflavin biosynthesis protein RibD [Oceanicaulis alexandrii HTCC2633] Length = 195 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 48/154 (31%), Gaps = 21/154 (13%) Query: 3 KGNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M AL A + VG + V + +II A HAE A+ Sbjct: 9 EDLRYMDTALALAYARLGQTAPNPSVGCIIVRDGRIIGAAATAPGGR----PHAEPQALE 64 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 +YVTLEPC CA A+ A + +P G Sbjct: 65 QAGA-----RAEGATVYVTLEPCAHYGKTPPCAEALIAAHPAEVVIACRDPFEHVAGRGM 119 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 A + G+ E + + FF+ Sbjct: 120 TMLADAG----IAVLEGVREADAIALNAGFFERL 149 >gi|257066652|ref|YP_003152908.1| riboflavin biosynthesis protein RibD [Anaerococcus prevotii DSM 20548] gi|256798532|gb|ACV29187.1| riboflavin biosynthesis protein RibD [Anaerococcus prevotii DSM 20548] Length = 357 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 32/157 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M N+ M + A+ A ++ P VGA+ + N +II++ +++ D HAEI Sbjct: 1 MNYDNL-MRECFDLARKGA--GKVLTNPMVGAILIKNGEIIAKGYHKSN-TCD---HAEI 53 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGA--SNPKGG 108 +E L V LEPC C + +++R+ +NPK Sbjct: 54 DCFNNL-----KESAEGATLIVNLEPCSHFGKHPPCVDEVIKRKVKRVVIANLDTNPKVD 108 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G+ + E+ G+ E R++ + FF Sbjct: 109 GLSKLKEA--------GIEVITGVLEDEGRKLNEKFF 137 >gi|153005591|ref|YP_001379916.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter sp. Fw109-5] gi|152029164|gb|ABS26932.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter sp. Fw109-5] Length = 401 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 24/154 (15%) Query: 7 FMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+ EA R VGAV V ++++R + HAE++ Sbjct: 34 FMRAAVREATKGLGRTSPNPAVGAVLVKGGRVVARGHHARAGG----PHAEVV-----AL 84 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + DLY TLEPC C+ A+ A +RR++ G+++P G Sbjct: 85 RAAGARARGADLYTTLEPCDHFGRTPPCSVAVLEAGVRRVFVGSADPNPLVNGRGVARLR 144 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 E+ G+ + ++ +F ERR Sbjct: 145 EGG----VEVVTGVLRETCDELNAHWFTFITERR 174 >gi|328951151|ref|YP_004368486.1| riboflavin biosynthesis protein RibD [Marinithermus hydrothermalis DSM 14884] gi|328451475|gb|AEB12376.1| riboflavin biosynthesis protein RibD [Marinithermus hydrothermalis DSM 14884] Length = 390 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 55/151 (36%), Gaps = 24/151 (15%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ A P VGAV V + +I+ + L HAE+ A+R Sbjct: 5 DERYMRRALQLAERARGHT-HPNPLVGAVVVKDGRIVGEGYHPRAGL----PHAEVFALR 59 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 +YVTLEPC C A+ A + R+ A +P Sbjct: 60 QAGEAA-----RGATVYVTLEPCNHHGRTPPCTTALLEAGVARVVVAARDPNPKAQGGLE 114 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + + G+ E +R + FF Sbjct: 115 RLAQA-----GVAVQWGVLEAEARAQNEVFF 140 >gi|293603326|ref|ZP_06685754.1| riboflavin biosynthesis protein RibD [Achromobacter piechaudii ATCC 43553] gi|292818236|gb|EFF77289.1| riboflavin biosynthesis protein RibD [Achromobacter piechaudii ATCC 43553] Length = 383 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 54/154 (35%), Gaps = 18/154 (11%) Query: 2 KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M AL A++ VG V V + +++ + HAEI A+ Sbjct: 7 SDDIFWMRRALALAESVLYTTAPNPRVGCVIVRDGRMLGEGATQPPGG----PHAEIRAL 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R QE + LYVTLEPC C A+ AR R+ +P G Sbjct: 63 RDA--ESRQEAVEGATLYVTLEPCSHFGRTPPCVDAVLAARPARVVVAIGDPNPLVNGQG 120 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A ++ G+ EQ + + F Sbjct: 121 LARLRAAG----IQVTTGVCEQEALALNAGFISR 150 >gi|254368626|ref|ZP_04984642.1| predicted protein [Francisella tularensis subsp. holarctica FSC022] gi|157121529|gb|EDO65720.1| predicted protein [Francisella tularensis subsp. holarctica FSC022] Length = 64 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 35/59 (59%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM A ++A A E+P+GAV V +++II + N+ L D TAHAEIL +R Sbjct: 6 DQDIFFMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLR 64 >gi|94311620|ref|YP_584830.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Cupriavidus metallidurans CH34] gi|93355472|gb|ABF09561.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase ; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Cupriavidus metallidurans CH34] Length = 373 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 50/148 (33%), Gaps = 18/148 (12%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A P VG V + + +I + HAEI A++ Sbjct: 10 MEQALALAARGMFTTTPNPRVGCVLMKDGVVIGEGYTQPAGQD----HAEIQAMKDAISR 65 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC CA A+ A I R+ +P G Q Sbjct: 66 GHDP--AGATAYVTLEPCSHFGRTPPCADALVRAGIARVVAAMEDPNPTVSGRGLQRLRD 123 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A ++ G+ E+ +R + F Sbjct: 124 AG----IDVRCGLLEKEARDLNIGFISR 147 >gi|260772212|ref|ZP_05881128.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio metschnikovii CIP 69.14] gi|260611351|gb|EEX36554.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio metschnikovii CIP 69.14] Length = 369 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 53/152 (34%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M+ A++ AQ P VG V +I+ + HAE+ A+RM Sbjct: 9 DYQMMARAIQLAQRGRFTTAPNPKVGCVITQQGRIVGEGFHYRAGQ----PHAEVHALRM 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +E YVTLEPC CA + A + ++ +P G Sbjct: 65 A-----KEYARGATAYVTLEPCSHYGRTPPCAEGLIQAGVAKVICAMQDPNPQVSGRGIA 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E ++ + F K Sbjct: 120 MLREAG----IEVEVGLLEADAKVLNPAFIKR 147 >gi|160895274|ref|ZP_02076046.1| hypothetical protein CLOL250_02834 [Clostridium sp. L2-50] gi|156863153|gb|EDO56584.1| hypothetical protein CLOL250_02834 [Clostridium sp. L2-50] Length = 336 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 44/122 (36%), Gaps = 19/122 (15%) Query: 30 AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC------ 83 V + +II +R HAE A E ++YVTLEPC Sbjct: 2 IVKDGRIIGEGYHRRYGEL----HAERDAF-----AHLTEDAAGAEMYVTLEPCCHYGKQ 52 Query: 84 TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 C AI +I R+Y G+ +P G Q A E+ + ++ + Sbjct: 53 PPCVNAIIEHKISRVYVGSDDPNALVSGKGYQILRDAG----IEVITHVLKEECDSLNPV 108 Query: 144 FF 145 FF Sbjct: 109 FF 110 >gi|284051945|ref|ZP_06382155.1| riboflavin biosynthesis protein [Arthrospira platensis str. Paraca] gi|291567830|dbj|BAI90102.1| riboflavin biosynthesis protein RibD [Arthrospira platensis NIES-39] Length = 387 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 51/149 (34%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M L A+ P VG V V + KII + HAEI A+R Sbjct: 13 DRQMMRYCLNLAKEGLGKTAPNPLVGCVIVRDQKIIGEGYH----PGPGQPHAEIFALRS 68 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + +YV LEPC C+ A+ A + ++ G +P G Sbjct: 69 AGELA-----RGATVYVNLEPCNHYGRTPPCSEALIKAGVAKVVAGMVDPNPLVGGQGIA 123 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E ++ + F Sbjct: 124 KLCEAG----IEVIVGVEESACLKLNEAF 148 >gi|171057779|ref|YP_001790128.1| CMP/dCMP deaminase zinc-binding [Leptothrix cholodnii SP-6] gi|170775224|gb|ACB33363.1| CMP/dCMP deaminase zinc-binding [Leptothrix cholodnii SP-6] Length = 166 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/101 (31%), Positives = 43/101 (42%), Gaps = 7/101 (6%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A + A+ A P GA+ V + ++ GN D HAE + R R Sbjct: 18 LRGANQIARAALAAGHHPFGALLVAADHRTVLLSQGNL-----DSVNHAEAVLAREAARR 72 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 S L + LY T+EPC MCA A I RL +G S Sbjct: 73 FSPAELWDCTLYTTVEPCCMCAGTQYWAHIGRLVFGMSEAD 113 >gi|149927761|ref|ZP_01916013.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase, C-terminal [Limnobacter sp. MED105] gi|149823587|gb|EDM82817.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase, C-terminal [Limnobacter sp. MED105] Length = 377 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 50/153 (32%), Gaps = 18/153 (11%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL A P VG V V + I+ + HAE+ AI Sbjct: 7 TDEHWMQHALNLAWKGQYSTTPNPRVGCVFVRDGVAIAEGFHAKAGEG----HAEVQAI- 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 L YVTLEPC CA A+ + R+ +P G Sbjct: 62 -ADSRARGVSLAGSTAYVTLEPCAHHGRTGPCAEALVATGVARVVAAVLDPNPLVSGKGM 120 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E G+ +++R I + FF Sbjct: 121 AILQAAG----IETAHGVLIEQARWINRGFFSR 149 >gi|260436195|ref|ZP_05790165.1| riboflavin biosynthesis protein RibD [Synechococcus sp. WH 8109] gi|260414069|gb|EEX07365.1| riboflavin biosynthesis protein RibD [Synechococcus sp. WH 8109] Length = 354 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 48/131 (36%), Gaps = 20/131 (15%) Query: 26 VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83 VGAV + +++ + AHAE+ A+R L VTLEPC Sbjct: 26 VGAVVLDRQGRLVGEGFHARAGD----AHAEVGALRQAGDAA-----RGGTLVVTLEPCC 76 Query: 84 -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 C+ A+ A I R+ +P G + A E+ G+ + +R Sbjct: 77 HHGRTPPCSEAVLSAGIGRVVIALEDPDPRVDGGGIRQLREAGL----EVISGVLREEAR 132 Query: 139 QIIQDFFKERR 149 Q + F R Sbjct: 133 QQNRAFLHRVR 143 >gi|257138273|ref|ZP_05586535.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis E264] Length = 369 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 53/145 (36%), Gaps = 18/145 (12%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A P VG V V ++ +I + HAE+ A++ R Sbjct: 1 MQRALALAARGMYTTTPNPRVGCVIVKDDVVIGEGFTQPAGQD----HAEVQALKDA-RA 55 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L + +YVTLEPC CA A+ AR+ ++ +P G Sbjct: 56 RGN-DLRDATVYVTLEPCSHFGRTPPCAHALIDARVGKVVAAMEDPNPQVSGRGLAMLRD 114 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ + ++ F Sbjct: 115 AG----IDVRCGLLAHEAHEMNIGF 135 >gi|15229953|ref|NP_187181.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis thaliana] gi|6729040|gb|AAF27036.1|AC009177_26 unknown protein [Arabidopsis thaliana] gi|332640696|gb|AEE74217.1| Cytidine/deoxycytidylate deaminase-like protein [Arabidopsis thaliana] Length = 113 Score = 91.9 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 29/71 (40%), Positives = 40/71 (56%) Query: 48 KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 KD TAHAE++AIR C+ L++ L E ++Y + EPC MC AI L+R++RL Y A Sbjct: 6 KDPTAHAEVIAIREACKKLNEIKLSECEIYASCEPCPMCFGAIHLSRLKRLVYEAKVEAA 65 Query: 108 GGIENGTQFYT 118 I Sbjct: 66 LAIGFNRILAD 76 >gi|326315894|ref|YP_004233566.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372730|gb|ADX44999.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 177 Score = 91.9 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 7/97 (7%) Query: 10 CALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A A+ A P GA+ V + +++ GN D HAE R Sbjct: 31 RADAVARRAMDAGRHPFGALLVAPDGDTVLAEQGN-----IDTVNHAESTLAREAAARWP 85 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 ++L L T EPC MCA I A I R+ YGA Sbjct: 86 ADLLRGCTLVTTFEPCAMCAGTIYWAGIGRVLYGAEE 122 >gi|325918412|ref|ZP_08180540.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xanthomonas vesicatoria ATCC 35937] gi|325535374|gb|EGD07242.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xanthomonas vesicatoria ATCC 35937] Length = 364 Score = 91.9 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M+ AL A+ A P VG V V + + ++ HAE+ Sbjct: 7 DHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGG----PHAEVF---- 58 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + + YVTLEPC CA A+ A + R+ ++P G Sbjct: 59 -ALRAAGALARGATAYVTLEPCAHYGRTPPCALALIEAGVARVVAAMADPFPQVNGGGFA 117 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ + ++RQ+ Q F Sbjct: 118 LLREAG----IEVVSGVLQAQARQLNQGF 142 >gi|325000060|ref|ZP_08121172.1| cytosine/adenosine deaminase [Pseudonocardia sp. P1] Length = 158 Score = 91.9 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 2/103 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAIR 60 ++ V + +E A+ A + P G+V V + ++ + NR D T H E R Sbjct: 3 EQDRVHLRRCVELAEQALGAGDEPFGSVLVDASGVVRAEDRNRV-AGGDPTRHPEFELAR 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 +L+ +Y + E C MCAAA + + R+ Y +S Sbjct: 62 RATELLTPGERAGATVYTSGEHCPMCAAAHAWVGLGRIVYASS 104 >gi|126440570|ref|YP_001060025.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 668] gi|167912128|ref|ZP_02499219.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 112] gi|217420854|ref|ZP_03452359.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 576] gi|254180983|ref|ZP_04887581.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 1655] gi|254191828|ref|ZP_04898331.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei Pasteur 52237] gi|126220063|gb|ABN83569.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 668] gi|157939499|gb|EDO95169.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei Pasteur 52237] gi|184211522|gb|EDU08565.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 1655] gi|217396266|gb|EEC36283.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 576] Length = 380 Score = 91.9 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL A P VG V V ++ +I + HAE+ A+ Sbjct: 4 ESDFTHMQRALALAARGMYTTTPNPRVGCVIVKDDVVIGEGFTQPAGQD----HAEVQAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + R L + +YVTLEPC CA + AR+ ++ +P G Sbjct: 60 KDA-RARGN-DLRDATVYVTLEPCSHFGRTPPCAHTLIDARVGKVVAAMEDPNPQVSGRG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ + ++ F Sbjct: 118 LAMLRDAG----IDVRCGLLAHEAHEMNIGF 144 >gi|320102303|ref|YP_004177894.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Isosphaera pallida ATCC 43644] gi|319749585|gb|ADV61345.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Isosphaera pallida ATCC 43644] Length = 387 Score = 91.9 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 41/149 (27%), Positives = 60/149 (40%), Gaps = 21/149 (14%) Query: 8 MSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A+ E P VGA+ V +++ R +R HAE+ A+R Sbjct: 1 MRLALALAERGRGHVEPNPMVGALIVRGGEVVGRGWHRRFGG----PHAEVEALRS---- 52 Query: 66 LSQEIL-PEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LS L L+VTLEPC C AI A I R+ ++P G Sbjct: 53 LSDPALARGATLFVTLEPCCHVGKTPPCTQAILEAGITRVVAAMADPFPKVAGGGLAALR 112 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R++ + K+ Sbjct: 113 AAG----VEVCHGLEETAARRLNAAYLKQ 137 >gi|86147437|ref|ZP_01065749.1| Pyrimidine reductase, riboflavin biosynthesis [Vibrio sp. MED222] gi|85834730|gb|EAQ52876.1| Pyrimidine reductase, riboflavin biosynthesis [Vibrio sp. MED222] Length = 364 Score = 91.9 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 55/149 (36%), Gaps = 22/149 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 MS A++ A+ P VG V V + +I+ + HAE+ A+RM Sbjct: 2 MSRAIQLAKRGIYTTAPNPNVGCVIVQTDGQIVGEGFHAKAGE----PHAEVHAMRMAGD 57 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 YVTLEPC CA + A++ ++ +P G + Sbjct: 58 KA-----KGATAYVTLEPCSHYGRTPPCAEGLIKAQVAKVICAMQDPNPKVAGRGIKMLR 112 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A ++ G+ EQ + + F K Sbjct: 113 DAG----IDVEIGLLEQDALDLNPAFIKR 137 >gi|92114703|ref|YP_574631.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Chromohalobacter salexigens DSM 3043] gi|91797793|gb|ABE59932.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Chromohalobacter salexigens DSM 3043] Length = 380 Score = 91.9 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 21/150 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+ A++ + P VG V V +I+ + HAE+ A+R Sbjct: 10 MARALQLARHGCYTTHPNPRVGCVVVNAGRIVGEGYHAYAGG----PHAEVHALREAGDA 65 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +YVTLEPC CA A+ A +RR+ +P G Sbjct: 66 A-----AGATVYVTLEPCSHHGRTPPCAQALIDAGVRRVVVAMVDPNPQVAGRGVAMLRE 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ + + F K R Sbjct: 121 AG----IEVDVGLLATDAEALNVGFVKRMR 146 >gi|311693383|gb|ADP96256.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [marine bacterium HP15] Length = 371 Score = 91.9 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 50/154 (32%), Gaps = 21/154 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M+ A++ A + P VG V + ++ + AHAE A+ Sbjct: 4 NRDRAMMARAVQLAWRGRYSTHPNPRVGCVIARGDLVLGEGWHERAGE----AHAETRAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 YVTLEPC CA A+ A + +Y +P G Sbjct: 60 SQAG-----PDARGATAYVTLEPCSHFGRTPPCARALIDAGVAHVYAATKDPNPSVSGRG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ + + ++ F K Sbjct: 115 LDMLREAG----IRVTEGLLAEEAARLNPGFMKR 144 >gi|119486672|ref|XP_001262322.1| hypothetical protein NFIA_028560 [Neosartorya fischeri NRRL 181] gi|119410479|gb|EAW20425.1| hypothetical protein NFIA_028560 [Neosartorya fischeri NRRL 181] Length = 106 Score = 91.9 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 5/91 (5%) Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R + +L DLYVT+EPC MCA+A+ +IR +Y+G +N + GG + ++ T Sbjct: 3 RSHPKSLLRSTDLYVTVEPCVMCASALRQYQIRAVYFGCANDRFGGTGSILSLHSDFTID 62 Query: 124 HSPEIYPGISEQRSRQIIQDFF-----KERR 149 +Y G+ + + +++ F+ K RR Sbjct: 63 PPYPVYGGLFRKEAIMLLRRFYIQENEKGRR 93 >gi|307211478|gb|EFN87584.1| tRNA-specific adenosine deaminase-like protein 3 [Harpegnathos saltator] Length = 428 Score = 91.9 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 41/75 (54%) Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + +++ EPC +CA A+ +R+ R++YGA+NP+ G + + +T+ +H Sbjct: 342 KCGPYLCTGYWVFLLTEPCPLCAMALLHSRVARVFYGAANPRVGVLGSRAILHTMPGLNH 401 Query: 125 SPEIYPGISEQRSRQ 139 ++ GI E+ R+ Sbjct: 402 RYRVWSGILERECRR 416 >gi|134096905|ref|YP_001102566.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Saccharopolyspora erythraea NRRL 2338] gi|291006653|ref|ZP_06564626.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Saccharopolyspora erythraea NRRL 2338] gi|133909528|emb|CAL99640.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Saccharopolyspora erythraea NRRL 2338] Length = 159 Score = 91.9 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 9/146 (6%) Query: 1 MKKGNV-FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58 M ++ + A+E + A + P G++ V + +++ N R +D++AH E+ Sbjct: 1 MTDDDLRHLRRAIELSARARESGDEPFGSLLVGPDGAVLAEDVNTVRTDRDISAHPELKL 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGGIENGT 114 R L +Y + E C MC+AA+ + + RL + + G G Sbjct: 61 AVWAARHLDPATSAATTMYTSCENCAMCSAAMVSSGVGRLVFALDGRRLASFRGEQRPGL 120 Query: 115 QFYT---LATCHHSPEIYPGISEQRS 137 A + + + + + Sbjct: 121 DLPAADVFARASRTIAVEGPLLAEEA 146 >gi|167577925|ref|ZP_02370799.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis TXDOH] Length = 195 Score = 91.9 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 53/152 (34%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M+ AL A+ VG V + + +R HAE+ A+R Sbjct: 8 DRMHMAHALRLAEQGLYTTHPNPRVGCVIARGAQALGAGWHRRAGE----PHAEVHALRE 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ A +P G Sbjct: 64 AG-----ERARGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAA 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E ++R++ FF Sbjct: 119 RLADAG----IVVEQGLLEAQARELNIGFFSR 146 >gi|121595392|ref|YP_987288.1| CMP/dCMP deaminase [Acidovorax sp. JS42] gi|120607472|gb|ABM43212.1| CMP/dCMP deaminase, zinc-binding protein [Acidovorax sp. JS42] Length = 170 Score = 91.9 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 57/161 (35%), Gaps = 21/161 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILA 58 M K + + AQ A P GAV V ++ ++ N D HAE Sbjct: 18 MLKH---LRRSNAVAQRAVSLGHHPFGAVLVGPDQETVLLEQCN-----IDTVNHAESTL 69 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG--------- 109 R+ + E L LY +EPC MCA A I R+ YG + + Sbjct: 70 ARVAATNFTPEFLWGCTLYTAVEPCCMCAGTAYWANIGRVVYGMTEAQLLAETGSHAENP 129 Query: 110 IENGTQFYTLATCHHSPEIYPGISE--QRSRQIIQDFFKER 148 + Y C E+ + E + + + + F+ R Sbjct: 130 TMSVPSRYVFDHCQKPVELIGPVPEIAEETVAMQRAFWASR 170 >gi|15618780|ref|NP_225066.1| riboflavin deaminase [Chlamydophila pneumoniae CWL029] gi|15836404|ref|NP_300928.1| riboflavin deaminase [Chlamydophila pneumoniae J138] gi|16752168|ref|NP_445535.1| riboflavin-specific deaminase [Chlamydophila pneumoniae AR39] gi|33242231|ref|NP_877172.1| riboflavin-specific deaminase [Chlamydophila pneumoniae TW-183] gi|6225949|sp|Q9Z735|RIBD_CHLPN RecName: Full=Riboflavin biosynthesis protein RibD; Includes: RecName: Full=Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase; Includes: RecName: Full=5-amino-6-(5-phosphoribosylamino)uracil reductase; AltName: Full=HTP reductase gi|4377188|gb|AAD19009.1| Riboflavin Deaminase [Chlamydophila pneumoniae CWL029] gi|7189911|gb|AAF38776.1| riboflavin-specific deaminase [Chlamydophila pneumoniae AR39] gi|8979245|dbj|BAA99079.1| riboflavin deaminase [Chlamydophila pneumoniae J138] gi|33236742|gb|AAP98829.1| riboflavin-specific deaminase [Chlamydophila pneumoniae TW-183] Length = 376 Score = 91.9 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 58/150 (38%), Gaps = 23/150 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++ FM A+E + + P VG V V N+II + HAE LA Sbjct: 6 EQQLFFMRRAIEIGEKGRITA-PPNPWVGCVVVQENRIIGEGFHAYAGG----PHAEELA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEP------CTMCAAAISLARIRRLYYGASNPKGGGIEN 112 I+ + D+YV+LEP C CA + ++ R++ +P Sbjct: 61 IQNASMPI-----SGSDVYVSLEPCSHFGSCPPCANLLIKHKVSRVFVALVDPDPKVAGQ 115 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 G A ++Y GI E ++ +Q Sbjct: 116 GIAMLRQAG----IQVYVGIGESEAQASLQ 141 >gi|149909528|ref|ZP_01898182.1| putative riboflavin deaminase [Moritella sp. PE36] gi|149807433|gb|EDM67384.1| putative riboflavin deaminase [Moritella sp. PE36] Length = 144 Score = 91.9 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 52/140 (37%), Gaps = 21/140 (15%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM ALE ++ A R PVG V V +N I+S + HAE AI Sbjct: 5 NDEKFMLRALELSKLALPNCRPNPPVGCVLVKDNIIVSEGYTQAPGQH----HAEAQAIA 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 L ++ YVTLEPC CA ++ I+R+ +P G Sbjct: 61 NYGAA-----LNDITAYVTLEPCSFVGRTPSCAHTLAGLNIKRVVVATVDPDPRNSGKGL 115 Query: 115 QFYTLATCHHSPEIYPGISE 134 + ++ G+ + Sbjct: 116 SVLR----NAGIDVEVGVCQ 131 >gi|167895478|ref|ZP_02482880.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 7894] gi|167920101|ref|ZP_02507192.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei BCC215] gi|237813427|ref|YP_002897878.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei MSHR346] gi|237504754|gb|ACQ97072.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei MSHR346] Length = 378 Score = 91.9 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL A P VG V V ++ +I + HAE+ A+ Sbjct: 4 ESDFTHMQRALALAARGMYTTTPNPRVGCVIVKDDVVIGEGFTQPAGQD----HAEVQAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + R L + +YVTLEPC CA + AR+ ++ +P G Sbjct: 60 KDA-RARGN-DLRDATVYVTLEPCSHFGRTPPCAHTLIDARVGKVVAAMEDPNPQVSGRG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ + ++ F Sbjct: 118 LAMLRDAG----IDVRCGLLAHEAHEMNIGF 144 >gi|170725743|ref|YP_001759769.1| riboflavin biosynthesis protein RibD [Shewanella woodyi ATCC 51908] gi|169811090|gb|ACA85674.1| riboflavin biosynthesis protein RibD [Shewanella woodyi ATCC 51908] Length = 379 Score = 91.9 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 17/153 (11%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + MS A++ A+ + P VG V + +I+ + + HAE+ A+ Sbjct: 6 EDIEMMSRAIKLARQGLYTTQPNPCVGCVVTKDGQILGEGFH--IKAGGP--HAEVHALA 61 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M S YVTLEPC CA A+ ++ R+ +P G Sbjct: 62 MA-NSDSNLGAKGATAYVTLEPCSHYGRTPPCAEALIHNKLARVVVAVEDPNPQVCGRGI 120 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A ++ G+ + + +I F K Sbjct: 121 AMLRDAG----IQVDVGLLQDEAYKINPGFMKR 149 >gi|53720234|ref|YP_109220.1| multifunctional riboflavin biosynthetic protein [deaminase, reductase [Burkholderia pseudomallei K96243] gi|76810186|ref|YP_334473.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 1710b] gi|126453712|ref|YP_001067304.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 1106a] gi|134280288|ref|ZP_01766999.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 305] gi|167720794|ref|ZP_02404030.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei DM98] gi|167739778|ref|ZP_02412552.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 14] gi|167825410|ref|ZP_02456881.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 9] gi|167846901|ref|ZP_02472409.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei B7210] gi|167903861|ref|ZP_02491066.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei NCTC 13177] gi|226193754|ref|ZP_03789356.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei Pakistan 9] gi|242314762|ref|ZP_04813778.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 1106b] gi|254196130|ref|ZP_04902555.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei S13] gi|254259958|ref|ZP_04951012.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 1710a] gi|254298894|ref|ZP_04966344.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 406e] gi|52210648|emb|CAH36632.1| multifunctional riboflavin biosynthetic protein [deaminase, reductase [Burkholderia pseudomallei K96243] gi|76579639|gb|ABA49114.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 1710b] gi|126227354|gb|ABN90894.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 1106a] gi|134248295|gb|EBA48378.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 305] gi|157808908|gb|EDO86078.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 406e] gi|169652874|gb|EDS85567.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei S13] gi|225934059|gb|EEH30044.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei Pakistan 9] gi|242138001|gb|EES24403.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 1106b] gi|254218647|gb|EET08031.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 1710a] Length = 378 Score = 91.9 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL A P VG V V ++ +I + HAE+ A+ Sbjct: 4 ESDFTHMQRALALAARGMYTTTPNPRVGCVIVKDDVVIGEGFTQPAGQD----HAEVQAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + R L + +YVTLEPC CA + AR+ ++ +P G Sbjct: 60 KDA-RARGN-DLRDATVYVTLEPCSHFGRTPPCAHTLIDARVGKVVAAMEDPNPQVSGRG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ + ++ F Sbjct: 118 LAMLRDAG----IDVRCGLLAHEAHEMNIGF 144 >gi|85715452|ref|ZP_01046433.1| Riboflavin biosynthesis protein RibD [Nitrobacter sp. Nb-311A] gi|85697647|gb|EAQ35523.1| Riboflavin biosynthesis protein RibD [Nitrobacter sp. Nb-311A] Length = 383 Score = 91.9 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 46/143 (32%), Gaps = 21/143 (14%) Query: 4 GNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL + A VGAV V N I+ R + HAE A+R Sbjct: 21 DLHFMQLALALGRRSLGASAPNPAVGAVIVKNGVIVGRGWTQPGGR----PHAEAEALRR 76 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 LYVTLEPC CA A+ A I R+ +P G Sbjct: 77 AGEAA-----RGATLYVTLEPCSHVGKTPPCADAVIAAGITRVVSAIEDPTPEVAGKGHA 131 Query: 116 FYTLATCHHSPEIYPGISEQRSR 138 A + G+ + Sbjct: 132 RLRAAG----ISVEVGLCADEAA 150 >gi|53725938|ref|YP_103713.1| riboflavin biosynthesis protein RibD [Burkholderia mallei ATCC 23344] gi|67643977|ref|ZP_00442720.1| riboflavin biosynthesis protein RibD [Burkholderia mallei GB8 horse 4] gi|121598467|ref|YP_992112.1| riboflavin biosynthesis protein RibD [Burkholderia mallei SAVP1] gi|124385806|ref|YP_001028557.1| riboflavin biosynthesis protein RibD [Burkholderia mallei NCTC 10229] gi|126449378|ref|YP_001081545.1| riboflavin biosynthesis protein RibD [Burkholderia mallei NCTC 10247] gi|166998345|ref|ZP_02264205.1| riboflavin biosynthesis protein RibD [Burkholderia mallei PRL-20] gi|254175573|ref|ZP_04882233.1| riboflavin biosynthesis protein RibD [Burkholderia mallei ATCC 10399] gi|254202412|ref|ZP_04908775.1| riboflavin biosynthesis protein RibD [Burkholderia mallei FMH] gi|254207743|ref|ZP_04914093.1| riboflavin biosynthesis protein RibD [Burkholderia mallei JHU] gi|254356356|ref|ZP_04972632.1| riboflavin biosynthesis protein RibD [Burkholderia mallei 2002721280] gi|52429361|gb|AAU49954.1| riboflavin biosynthesis protein RibD [Burkholderia mallei ATCC 23344] gi|121227277|gb|ABM49795.1| riboflavin biosynthesis protein RibD [Burkholderia mallei SAVP1] gi|124293826|gb|ABN03095.1| riboflavin biosynthesis protein RibD [Burkholderia mallei NCTC 10229] gi|126242248|gb|ABO05341.1| riboflavin biosynthesis protein RibD [Burkholderia mallei NCTC 10247] gi|147746659|gb|EDK53736.1| riboflavin biosynthesis protein RibD [Burkholderia mallei FMH] gi|147751637|gb|EDK58704.1| riboflavin biosynthesis protein RibD [Burkholderia mallei JHU] gi|148025353|gb|EDK83507.1| riboflavin biosynthesis protein RibD [Burkholderia mallei 2002721280] gi|160696617|gb|EDP86587.1| riboflavin biosynthesis protein RibD [Burkholderia mallei ATCC 10399] gi|238525453|gb|EEP88881.1| riboflavin biosynthesis protein RibD [Burkholderia mallei GB8 horse 4] gi|243065414|gb|EES47600.1| riboflavin biosynthesis protein RibD [Burkholderia mallei PRL-20] Length = 380 Score = 91.9 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL A P VG V V ++ +I + HAE+ A+ Sbjct: 4 ESDFTHMQRALALAARGMYTTAPNPRVGCVIVKDDVVIGEGFTQPAGQD----HAEVQAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + R L + +YVTLEPC CA + AR+ ++ +P G Sbjct: 60 KDA-RARGN-DLRDATVYVTLEPCSHFGRTPPCAHTLIDARVGKVVAAMEDPNPQVSGRG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ + ++ F Sbjct: 118 LAMLRDAG----IDVRCGLLAHEAHEMNIGF 144 >gi|300113775|ref|YP_003760350.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii C-113] gi|299539712|gb|ADJ28029.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii C-113] Length = 159 Score = 91.5 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 49/133 (36%), Gaps = 3/133 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +E A A + P G+V V + K++ NR D T H E R Sbjct: 4 DSDMQYLRRCVELAAKALESGDEPFGSVLVAADGKVLFEDRNRV-ASGDRTRHPEFEIAR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +S E +Y + E C MCAAA + R+ Y +S+ + Sbjct: 63 WAAANMSPEARVAATVYTSGEHCPMCAAAHGWVGLGRIVYVSSSEQLATWLTDLGVPAPP 122 Query: 121 -TCHHSPEIYPGI 132 E+ PG+ Sbjct: 123 VRTLPIREVVPGV 135 >gi|255002722|ref|ZP_05277686.1| riboflavin biosynthesis protein (ribD) [Anaplasma marginale str. Puerto Rico] Length = 364 Score = 91.5 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 28/155 (18%) Query: 8 MSCALEEAQNAALRNEI---P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 MS AL A P VG V I+ R HAE++A++ Sbjct: 1 MSIALRLAHRGL--GNTYPNPTVGCVVTNSAGSIVGRGW--TAMGGRP--HAEVVALKQA 54 Query: 63 CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQF 116 +YVTLEPC C AA+ A +RR+ A +P G + Sbjct: 55 GEAA-----AGSTVYVTLEPCCHHGQTGPCTAALISAGVRRVVIAALDPDKRVSGKGARS 109 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF--KERR 149 + E+ G+ +Q++ ++ FF K +R Sbjct: 110 LADSG----VEVKLGVLQQQAEELNVGFFYSKTKR 140 >gi|315657966|ref|ZP_07910840.1| riboflavin biosynthesis protein RibD [Staphylococcus lugdunensis M23590] gi|315497002|gb|EFU85323.1| riboflavin biosynthesis protein RibD [Staphylococcus lugdunensis M23590] Length = 383 Score = 91.5 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 24/155 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 K ++++S A++ A+ + + PVGAV V N +II + + K HAE+ AI Sbjct: 35 DKLDLYLSKAIQLAKMVKGQTGVNPPVGAVVVKNGRIIGLGAHLKQGEK----HAEVQAI 90 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 M +YV+L+PC C I + ++ Y + Sbjct: 91 DMAGDEAQ-----GATIYVSLQPCTHYGSTPPCVNKIIDHGLDKVVYAVKDTTL--PSKS 143 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + T A ++Y + + + +DFFK + Sbjct: 144 DEILTQAG----IQVYQQF-DHEAYCLYEDFFKAK 173 >gi|289550476|ref|YP_003471380.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Staphylococcus lugdunensis HKU09-01] gi|289180008|gb|ADC87253.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Staphylococcus lugdunensis HKU09-01] Length = 368 Score = 91.5 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 24/155 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 K ++++S A++ A+ + + PVGAV V N +II + + K HAE+ AI Sbjct: 20 DKLDLYLSKAIQLAKMVKGQTGVNPPVGAVVVKNGRIIGLGAHLKQGEK----HAEVQAI 75 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 M +YV+L+PC C I + ++ Y + Sbjct: 76 DMAGDEAQ-----GATIYVSLQPCTHYGSTPPCVNKIIDHGLDKVVYAVKDTTL--PSKS 128 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + T A ++Y + + + +DFFK + Sbjct: 129 DEILTQAG----IQVYQQF-DHEAYCLYEDFFKAK 158 >gi|116251387|ref|YP_767225.1| riboflavin biosynthesis protein [Rhizobium leguminosarum bv. viciae 3841] gi|115256035|emb|CAK07116.1| putative riboflavin biosynthesis protein [Rhizobium leguminosarum bv. viciae 3841] Length = 448 Score = 91.5 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 46/141 (32%), Gaps = 21/141 (14%) Query: 4 GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM+ A+ ++ VG + V + I+ RA HAE A+ Sbjct: 7 DERFMAAAIRLSRWHLGRTATNPSVGCLIVKDGVIVGRA----VTALSGRPHAETQALAE 62 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC C+ A+ + R+ ++P G Sbjct: 63 ASALA-----RGATAYVTLEPCSHHGKTPPCSEALIAYGVARVVISVTDPDPRVSGRGIA 117 Query: 116 FYTLATCHHSPEIYPGISEQR 136 A E+ G+ E Sbjct: 118 MLREAG----IEVDAGVLEAE 134 >gi|72162124|ref|YP_289781.1| hypothetical protein Tfu_1723 [Thermobifida fusca YX] gi|71915856|gb|AAZ55758.1| conserved hypothetical protein [Thermobifida fusca YX] Length = 163 Score = 91.5 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 57/153 (37%), Gaps = 11/153 (7%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 + + +E A A + P G+V V + +++ NR D T H E R Sbjct: 4 ETDVRHLRRCVELAAQALEAGDEPFGSVLVAGDGTVLAEDHNRV-ASGDRTRHPEFALAR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 R L+ E +Y + E C MCAAA + R+ Y +S+ + Sbjct: 63 WAVRNLTPNERAEATVYTSGEHCPMCAAAHGWVGLGRIVYASSSAQLMEWLAELGVPAPP 122 Query: 121 -TCHHSPEIYPGI--------SEQRSRQIIQDF 144 E+ PG+ ++ R++ + F Sbjct: 123 VRALPIREVVPGVTVEGPVPELAEQVRELHRRF 155 >gi|238023203|ref|ZP_04603629.1| hypothetical protein GCWU000324_03130 [Kingella oralis ATCC 51147] gi|237865586|gb|EEP66726.1| hypothetical protein GCWU000324_03130 [Kingella oralis ATCC 51147] Length = 359 Score = 91.5 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 52/150 (34%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M AL A + P VG V ++I+ + + + HAE+ A+ Sbjct: 7 QDTQHMQLALALAWQGRFSTSPNPRVGCVIAHGSQIVGQGYH--VQAGAP--HAEVHALA 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ A + R+ +P G Sbjct: 63 QAGALA-----RGATAYVTLEPCAHHGRTPPCAEALVRAGVSRVVAAMQDPNPLVAGKGL 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + G+ E +R + + F Sbjct: 118 AILRQAG----TQTASGLCEAEARALNRGF 143 >gi|119486402|ref|ZP_01620460.1| riboflavin biosynthesis protein [Lyngbya sp. PCC 8106] gi|119456304|gb|EAW37435.1| riboflavin biosynthesis protein [Lyngbya sp. PCC 8106] Length = 368 Score = 91.5 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 57/150 (38%), Gaps = 22/150 (14%) Query: 4 GNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIR 60 M LE A+ A P VG+V V +N II + HAE+ A+R Sbjct: 14 DRQMMLRCLELARQALGKTAPNPLVGSVVVQDNYNIIGEGFH----PGAGQPHAEVFALR 69 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E +YV LEPC C A+ A++ ++ G +P G Sbjct: 70 DAG-----EQAKGATVYVNLEPCNHYGRTPPCTEALIKAKVAKVVVGMIDPNPLVAGQGV 124 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A E+ G+ ++ +Q+ + F Sbjct: 125 ERLKQAG----IEVIVGVEQEACQQLNEGF 150 >gi|254193400|ref|ZP_04899834.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei S13] gi|169650153|gb|EDS82846.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei S13] Length = 398 Score = 91.5 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 51/152 (33%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M+ AL A+ VG V + + +R HAE+ A+R Sbjct: 8 DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALRE 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ A +P G Sbjct: 64 AG-----ERARGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAA 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ ++R++ FF Sbjct: 119 RLADAG----IVVEQGLLAAQARELNIGFFSR 146 >gi|296314604|ref|ZP_06864545.1| riboflavin biosynthesis protein RibD [Neisseria polysaccharea ATCC 43768] gi|296838643|gb|EFH22581.1| riboflavin biosynthesis protein RibD [Neisseria polysaccharea ATCC 43768] Length = 369 Score = 91.5 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 59/159 (37%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL+ A + P VG V +++ + + + + HAE+ A+ Sbjct: 4 ETDISMMQNALDLAALGRFSTSPNPRVGCVIAQGGQVVGQGFH--IKAGEP--HAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R ++ +VTLEPC CA A+ A + R+ +P G Sbjct: 60 RQAGKMA-----KGATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++++ + F + RR Sbjct: 115 LALLEAAGI--KMEC--GLLESEAKELNRGFLSRIERRR 149 >gi|298369934|ref|ZP_06981250.1| riboflavin biosynthesis protein RibD [Neisseria sp. oral taxon 014 str. F0314] gi|298281394|gb|EFI22883.1| riboflavin biosynthesis protein RibD [Neisseria sp. oral taxon 014 str. F0314] Length = 367 Score = 91.5 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 21/151 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL A+ + P VG V +I+ + + HAE+ A+ Sbjct: 4 ENDVRMMQNALALARLGRFSTSPNPRVGCVIAHGGQIVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + YVTLEPC CA A+ + + R+ ++P G Sbjct: 60 RQAGEMA-----RGATAYVTLEPCSHYGRTPPCAEALIRSGVARVVAAMTDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E G+ E +R++ + F Sbjct: 115 LAMLEAADI--RTE--SGLLETEARELNRGF 141 >gi|317508050|ref|ZP_07965736.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Segniliparus rugosus ATCC BAA-974] gi|316253646|gb|EFV13030.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Segniliparus rugosus ATCC BAA-974] Length = 196 Score = 91.5 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 7/103 (6%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIR 60 M A+ A P G+V V +N ++++ N N E + H E++A+ Sbjct: 49 THEANMRKAMHAAAGNPRL---PFGSVIVRTSDNAMLAKGVNHNTE--NPMWHGEVVALN 103 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 +V LY T EPC MCA AI A I R+ + +S Sbjct: 104 DYTARHGNADWRDVTLYTTGEPCAMCAGAIIWAGIPRVVWASS 146 >gi|126457369|ref|YP_001075539.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 1106a] gi|242313881|ref|ZP_04812898.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 1106b] gi|126231137|gb|ABN94550.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 1106a] gi|242137120|gb|EES23523.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 1106b] Length = 395 Score = 91.5 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 51/152 (33%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M+ AL A+ VG V + + +R HAE+ A+R Sbjct: 8 DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALRE 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ A +P G Sbjct: 64 AG-----ERARGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAA 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ ++R++ FF Sbjct: 119 RLADAG----IVVEQGLLAAQARELNIGFFSR 146 >gi|126442868|ref|YP_001062584.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 668] gi|126222359|gb|ABN85864.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 668] Length = 401 Score = 91.5 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 51/152 (33%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M+ AL A+ VG V + + +R HAE+ A+R Sbjct: 8 DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALRE 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ A +P G Sbjct: 64 AG-----ERARGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAA 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ ++R++ FF Sbjct: 119 RLADAG----IVVEQGLLAAQARELNIGFFSR 146 >gi|53722153|ref|YP_111138.1| riboflavin biosynthesis protein [Burkholderia pseudomallei K96243] gi|134283488|ref|ZP_01770188.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 305] gi|217418752|ref|ZP_03450259.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 576] gi|237509799|ref|ZP_04522514.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei MSHR346] gi|254190205|ref|ZP_04896714.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei Pasteur 52237] gi|254263160|ref|ZP_04954025.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 1710a] gi|52212567|emb|CAH38593.1| putative riboflavin biosynthesis protein [Burkholderia pseudomallei K96243] gi|134245237|gb|EBA45331.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 305] gi|157937882|gb|EDO93552.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei Pasteur 52237] gi|217398056|gb|EEC38071.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 576] gi|235002004|gb|EEP51428.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei MSHR346] gi|254214162|gb|EET03547.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 1710a] Length = 395 Score = 91.5 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 51/152 (33%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M+ AL A+ VG V + + +R HAE+ A+R Sbjct: 8 DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALRE 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ A +P G Sbjct: 64 AG-----ERARGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAA 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ ++R++ FF Sbjct: 119 RLADAG----IVVEQGLLAAQARELNIGFFSR 146 >gi|302419813|ref|XP_003007737.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] gi|261353388|gb|EEY15816.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] Length = 405 Score = 91.5 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 32/56 (57%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + FM AL+ A+ A NE PVG V V NNK+I++ N ++ T HAE +A Sbjct: 55 THHGFMDQALDMARLALRTNETPVGCVIVHNNKVIAKGMNATNVTRNGTRHAEFMA 110 Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 29/51 (56%) Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + I+ E LYVT+EPC MCA + IR++Y+GA N K GG + Sbjct: 185 PRSIIRESVLYVTVEPCVMCAGLLRQLGIRKVYFGAVNDKFGGAGGVFSIH 235 >gi|319404317|emb|CBI77910.1| Riboflavin biosynthesis protein ribD [Bartonella rochalimae ATCC BAA-1498] Length = 374 Score = 91.5 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 25/155 (16%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNK----IISRAGNRNRELKDVTAHAE 55 ++ FM+ A+ A+ L E P VGA+ V N I+ HAE Sbjct: 5 EQDKRFMAVAIRLAERHIGLTGENPSVGALIVQNKGAGASIVGYG----VTAIQGRPHAE 60 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGG 109 + A+ M + YVTLEPC+ C A+ + I R+ S+P Sbjct: 61 VQALLMAGPLAC-----GATAYVTLEPCSHYGETSPCVNALINSGITRVVIALSDPDQRV 115 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A E+ G+ + + + + + Sbjct: 116 YGCGIALLRAAG----IEVVEGVLAEEAFETLSAY 146 >gi|254253006|ref|ZP_04946324.1| Pyrimidine reductase [Burkholderia dolosa AUO158] gi|124895615|gb|EAY69495.1| Pyrimidine reductase [Burkholderia dolosa AUO158] Length = 373 Score = 91.5 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 20/154 (12%) Query: 1 MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M F M AL A P VG V V + +I + HAE+ Sbjct: 1 MFSDIDFAHMQRALALAARGMYTTAPNPRVGCVIVKDGSVIGEGFTQPAGQD----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++ + +YVTLEPC CA A+ AR+ ++ +P Sbjct: 57 QALKDA--RARGHDVAGATVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A ++ G+ + ++ F Sbjct: 115 GRGLTMLRDAG----IDVRCGLLAHEAGELNIGF 144 >gi|134294988|ref|YP_001118723.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Burkholderia vietnamiensis G4] gi|134138145|gb|ABO53888.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Burkholderia vietnamiensis G4] Length = 373 Score = 91.5 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 20/154 (12%) Query: 1 MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M F M AL A P VG V V + +I + HAE+ Sbjct: 1 MFSDTDFAHMQRALALAARGMYTTAPNPRVGCVIVKDGDVIGEGFTQPAGQD----HAEV 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A++ + +YVTLEPC CA A+ AR+ ++ +P Sbjct: 57 QALKDARARGC--DVAGATVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A ++ G+ + ++ F Sbjct: 115 GRGLGMLRDAG----IDVRCGLLAYEAGELNIGF 144 >gi|167906520|ref|ZP_02493725.1| riboflavin biosynthesis protein [Burkholderia pseudomallei NCTC 13177] Length = 397 Score = 91.5 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 51/152 (33%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M+ AL A+ VG V + + +R HAE+ A+R Sbjct: 8 DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALRE 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ A +P G Sbjct: 64 AG-----ERARGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAA 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ ++R++ FF Sbjct: 119 RLADAG----IVVEQGLLAAQARELNIGFFSR 146 >gi|74318186|ref|YP_315926.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Thiobacillus denitrificans ATCC 25259] gi|74057681|gb|AAZ98121.1| Riboflavin biosynthesis protein RibD diaminohydroxyphosphoribosylaminopyrimid ine deaminase + 5-amino-6-(5- phosphoribosylamino)uracil reductase oxidoreductase protein [Thiobacillus denitrificans ATCC 25259] Length = 359 Score = 91.5 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 40/149 (26%), Positives = 59/149 (39%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FMS AL+ A VG V V +++I+ + T HAEI A+ Sbjct: 7 DSRFMSRALQLAARGLFTTSPNPRVGCVLVKDDRIVGEGWHERA----GTPHAEIHAL-- 60 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + E YVTLEPC CA A+ A + R+ ++P G Sbjct: 61 ---RAAGEAARGATAYVTLEPCSHHGRTPPCAEALIDAGVSRVVAAMTDPNPLVAGGGIS 117 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 TLA + E+ G+ E +R + F Sbjct: 118 MLTLAGI--AAEV--GLMEAEARALNPGF 142 >gi|302761778|ref|XP_002964311.1| hypothetical protein SELMODRAFT_438667 [Selaginella moellendorffii] gi|300168040|gb|EFJ34644.1| hypothetical protein SELMODRAFT_438667 [Selaginella moellendorffii] Length = 336 Score = 91.5 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 57/187 (30%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELK-----------DVTA 52 FM A+ +A A + GAV V ++I+ + + Sbjct: 145 AFMVRAMHQASLAIDHGRLSNGAVIVDPSIGQVIASGYDESTPPSCTDCSSCSGGWHPLR 204 Query: 53 HAEILAIRMGCRILSQ-------------------------------------------- 68 HA ++AI + Sbjct: 205 HAAMVAIEQASERDRRLFPDDKECDEATLSVKRQRCEASAAESIHIESRSSSITVEASRP 264 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 + D+Y+T EPC MCA A+ R RR+ + SNP G + + + +H + Sbjct: 265 YLCTGFDIYLTREPCAMCAMAMVHQRFRRVIFRTSNPDNGALGGKFFLHRQPSLNHHYTV 324 Query: 129 YPGISEQ 135 + Sbjct: 325 IQATLAE 331 >gi|319405760|emb|CBI79383.1| Riboflavin biosynthesis protein ribD [Bartonella sp. AR 15-3] Length = 374 Score = 91.1 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 57/154 (37%), Gaps = 25/154 (16%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNK----IISRAGNRNRELKDVTAHAEI 56 + FM+ A+ A+ L E P VGA+ V N + I+ HAE+ Sbjct: 6 QDKRFMAAAIRLAERHIGLTGENPSVGALIVQNKETGSSIVGYG----VTALRGRPHAEV 61 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 A+ M + YVTLEPC+ C A+ A I R+ S+P Sbjct: 62 KALLMAGPLAY-----GATAYVTLEPCSHYGKTSPCVNALINAGITRVVIALSDPDQRVY 116 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A E+ G+ + + + + + Sbjct: 117 GCGITLLRAAG----IEVTEGVLAEEAFETLSAY 146 >gi|126666704|ref|ZP_01737681.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase, C-terminal [Marinobacter sp. ELB17] gi|126628749|gb|EAZ99369.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase, C-terminal [Marinobacter sp. ELB17] Length = 371 Score = 91.1 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 21/154 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + FM+ A++ A + P VG V ++I+ + + AHAE+ A+ Sbjct: 4 TRDRAFMARAVQLAWRGRYSTHPNPRVGCVIARGDRILGESWHERAGE----AHAEVRAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 YVTLEPC CA A+ A + R++ +P G Sbjct: 60 SQAG-----TSARGSTAYVTLEPCSHFGRTPPCAKALIEAGVARVFAATLDPNPNVSGRG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + A ++ G+ + ++ F K Sbjct: 115 LEMLRAAG----IRVHVGLLAGEAAKLNPGFMKR 144 >gi|307628117|gb|ADN72421.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli UM146] Length = 361 Score = 91.1 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+RM Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVQALRMAGEK 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC C A+ A + R+ +P G Sbjct: 57 A-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQ 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 112 AG----IDVSHGLMMSEAEQLNKGFLKRMR 137 >gi|221068623|ref|ZP_03544728.1| riboflavin biosynthesis protein RibD [Comamonas testosteroni KF-1] gi|220713646|gb|EED69014.1| riboflavin biosynthesis protein RibD [Comamonas testosteroni KF-1] Length = 367 Score = 91.1 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 19/153 (12%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 N +M+ ALE+A A VG V V +++II + ++ HAE++A+R Sbjct: 2 NNFYMNKALEQAAQALFLSSPNPRVGCVIVDASDRIIGQGF--TQQAGGP--HAEVMALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC+ C A+ A I ++ ++P G Sbjct: 58 DAAAKGNDVR--GATAYVTLEPCSHHGRTGPCCDALIAAGIAKVVGALTDPNPQVAGQGF 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + A ++ G SR++ FF Sbjct: 116 ERLRAAG----VDVEIGPGAAESRELNIGFFSR 144 >gi|319407322|emb|CBI80963.1| Riboflavin biosynthesis protein ribD [Bartonella sp. 1-1C] Length = 374 Score = 91.1 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 25/155 (16%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNK----IISRAGNRNRELKDVTAHAE 55 ++ FM+ A+ A+ L E P VGA+ V N I+ HAE Sbjct: 5 EQDKRFMAAAIRLAERHIGLTGENPSVGALIVQNKGAGASIVGYG----VTALQGRPHAE 60 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGG 109 + A+ M + YVTLEPC+ C A+ + I R+ S+P Sbjct: 61 VQALLMAGPLAY-----GATAYVTLEPCSHYGETSPCVNALINSGITRVVIALSDPDQRV 115 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A E+ G+ + + + + Sbjct: 116 YGCGIALLRAAG----IEVVEGVLADEAFETLSAY 146 >gi|254431289|ref|ZP_05044992.1| riboflavin biosynthesis protein RibD [Cyanobium sp. PCC 7001] gi|197625742|gb|EDY38301.1| riboflavin biosynthesis protein RibD [Cyanobium sp. PCC 7001] Length = 371 Score = 91.1 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 22/146 (15%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M AL+ A R VG V + +++ + AHAE+ A+R Sbjct: 1 MQRALQLANLGCGRTSPNPMVGCVVLDAEGRLVGEGYHSQAGE----AHAEVGALRQAG- 55 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 E VTLEPC C+ A+ A IRR+ ++P G Sbjct: 56 ----ERARGGTAVVTLEPCCHHGRTPPCSDALLAAGIRRVVVAMADPDPQVAGGGIAQLR 111 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G++ + +R + + F Sbjct: 112 SAG----VEVIEGVAAEEARALNRAF 133 >gi|308803240|ref|XP_003078933.1| COG1985: Pyrimidine reductase, riboflavin biosynthesis (ISS) [Ostreococcus tauri] gi|116057386|emb|CAL51813.1| COG1985: Pyrimidine reductase, riboflavin biosynthesis (ISS) [Ostreococcus tauri] Length = 207 Score = 91.1 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 60/156 (38%), Gaps = 24/156 (15%) Query: 3 KGNVFMSCALEEA--QNAALRNEIP-VGAVAVLN--NKIISRAGNRNRELKDVTAHAEIL 57 + +M ALE A + A + P VG V V + ++ R + HAE+ Sbjct: 57 RDEEYMRQALEAAASRTAEEVHPNPLVGCVVVDPRADVVVGRGFHPRAGE----PHAEVF 112 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+R + YVTLEPC CA A+ A ++R+ G +P Sbjct: 113 ALRAAGELA-----RGATAYVTLEPCNHFGRTPPCARALVDAGVKRVVVGFVDPDPRVSG 167 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G Q A ++ G E R R+I DF Sbjct: 168 GGIQTLLDAG----IDVAVGCEEARCREINADFIAR 199 >gi|73662304|ref|YP_301085.1| riboflavin specific deaminase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494819|dbj|BAE18140.1| riboflavin specific deaminase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 347 Score = 91.1 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 32/157 (20%) Query: 5 NVFMSCALEEAQNAALRNE--IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +++ A++ AQ + PVGAV V +I+ + + K HAE+ A+ M Sbjct: 2 SQYLNYAIQLAQMVEGQTGLNPPVGAVVVNRGRIVGIGAHLKKGDK----HAEVQALDMA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 ++ +Y++LEPC C I A I R+ Y + NG Sbjct: 58 -----KDNAKGGTIYISLEPCTHFGSTPPCVNKIIEAGINRVVYAVKDTTL--PSNGDSI 110 Query: 117 YTLAT----CHHSPEIYPGISEQRSRQIIQDFFKERR 149 A H P+ + + +DFF +R Sbjct: 111 LQEAGIDVEFRHQPD---------AENLYKDFFITKR 138 >gi|319783713|ref|YP_004143189.1| CMP/dCMP deaminase zinc-binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169601|gb|ADV13139.1| CMP/dCMP deaminase zinc-binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 164 Score = 91.1 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 33/139 (23%), Positives = 49/139 (35%), Gaps = 17/139 (12%) Query: 21 RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 P G V V +++++ R GN D HAE R E L + L T Sbjct: 31 HGHHPFGCVLVGPDDRVLMRQGNL-----DTVRHAETELARRAAAAYEPEFLWQCTLVST 85 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGI---------ENGTQFYTLATCHHSPEIYP 130 EPC MCA + A I RL YG + + + + L + E++ Sbjct: 86 FEPCAMCAGTMYWANIGRLVYGVEETELLALTGDHAENPTMSLSSRTVLGSGQKKIEVFG 145 Query: 131 GIS--EQRSRQIIQDFFKE 147 +DF+K Sbjct: 146 PFPDIADEMLAPHRDFWKR 164 >gi|260425443|ref|ZP_05779423.1| riboflavin biosynthesis protein RibD [Citreicella sp. SE45] gi|260423383|gb|EEX16633.1| riboflavin biosynthesis protein RibD [Citreicella sp. SE45] Length = 363 Score = 91.1 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 53/158 (33%), Gaps = 31/158 (19%) Query: 1 MKKGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-----H 53 M + M+ AL + VG V V + ++I R TA H Sbjct: 1 MTQDIRHMAHALRLGRRRMGQCWPNPAVGCVIVKDGRVIGRG---------ATAPGGRPH 51 Query: 54 AEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKG 107 AE A+ +YVTLEPC CA A+ A + R+ ++ Sbjct: 52 AEPQALAQAGVAA-----RGATVYVTLEPCAHHGKTPPCAEALVKAGVARVVAPLADSDP 106 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + H E+ G+ + + + FF Sbjct: 107 RVSGKGFEHLR----RHGIEVTTGVLAEEAARDHAGFF 140 >gi|302768607|ref|XP_002967723.1| hypothetical protein SELMODRAFT_440166 [Selaginella moellendorffii] gi|300164461|gb|EFJ31070.1| hypothetical protein SELMODRAFT_440166 [Selaginella moellendorffii] Length = 336 Score = 91.1 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 57/187 (30%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELK-----------DVTA 52 FM A+ +A A + GAV V ++I+ + + Sbjct: 145 AFMVRAMHQASLAIDHGRLSNGAVIVDPSIGQVIASGYDESTPPSCTDCSSCSGGWHPLR 204 Query: 53 HAEILAIRMGCRILSQ-------------------------------------------- 68 HA ++AI + Sbjct: 205 HAAMVAIEQASERDRRLFPDDKECDEATLSVKRQRCEASAAESIHIESRSSSITVEASRP 264 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 + D+Y+T EPC MCA A+ R RR+ + SNP G + + + +H + Sbjct: 265 YLCTGFDIYLTREPCAMCAMAMVHQRFRRVIFRTSNPDNGALGGKFFLHRQPSLNHHYTV 324 Query: 129 YPGISEQ 135 + Sbjct: 325 IQATLAE 331 >gi|261401666|ref|ZP_05987791.1| riboflavin biosynthesis protein RibD [Neisseria lactamica ATCC 23970] gi|269208249|gb|EEZ74704.1| riboflavin biosynthesis protein RibD [Neisseria lactamica ATCC 23970] Length = 369 Score = 91.1 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL+ A + P VG V +++ + + HAE+ A+ Sbjct: 4 ETDISMMQNALKLAALGRFSTSPNPRVGCVIAQGGQVVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + +VTLEPC CA A+ A + R+ +P G Sbjct: 60 RQAGEMA-----KGATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E +R++ + F + RR Sbjct: 115 LALLEAAGI--KTEC--GLLESEARELNRGFLSRIERRR 149 >gi|224476858|ref|YP_002634464.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Staphylococcus carnosus subsp. carnosus TM300] gi|222421465|emb|CAL28279.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Staphylococcus carnosus subsp. carnosus TM300] Length = 349 Score = 91.1 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 62/162 (38%), Gaps = 44/162 (27%) Query: 5 NVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 N F+ A++ A+ A + + P VG+V V + +I+ + LK HAE+ A+ M Sbjct: 2 NRFLENAIQLAKMAEGQTGVNPAVGSVVVNHGRIVGLGAH----LKQGERHAEVQALDMA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASN----------PK 106 + +YV+LEPC C I A I ++ Y + K Sbjct: 58 G-----DQARGGTIYVSLEPCTHYGSTPPCVNKIIEAGISKVVYAMKDITLDSPGDEILK 112 Query: 107 GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 GIE Q H + ++ +DFF + Sbjct: 113 SAGIEVVYQ--------HEV---------EAEKMYKDFFAAK 137 >gi|167570902|ref|ZP_02363776.1| riboflavin biosynthesis protein RibD [Burkholderia oklahomensis C6786] Length = 246 Score = 91.1 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 53/151 (35%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL A P VG V V N+ +I + HAE+ A+ Sbjct: 4 ESDFTHMQRALALAARGMYTTTPNPRVGCVIVQNDVVIGEGFTQPAGQD----HAEVQAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + L + +YVTLEPC CA A+ AR+ ++ +P G Sbjct: 60 KDARARGG--DLRDATVYVTLEPCSHFGRTPPCAHALIDARVGKVVAAMEDPNPQVSGRG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ + ++ F Sbjct: 118 LAMLRDAG----IDVRCGLLTHEAHEMNIGF 144 >gi|66806435|ref|XP_636940.1| CMP/dCMP deaminase, zinc-binding domain-containing protein [Dictyostelium discoideum AX4] gi|60465344|gb|EAL63435.1| CMP/dCMP deaminase, zinc-binding domain-containing protein [Dictyostelium discoideum AX4] Length = 239 Score = 91.1 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 14/141 (9%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M ++ A+ + + V ++ N I N R++KD+T HAEI+ I+ Sbjct: 50 HQGYMQQVIDFAK---EKGALFVASIVHKNGTQIVIDMNLGRQMKDLTQHAEIVVIQKAN 106 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122 + + LY T E C MC AI + ++ YG S + +Q +T Sbjct: 107 ALYGISNFSDYTLYTTGESCLMCQGAILYSGFSKVVYGTSIKTLYCDKCMSQVPIDSTFL 166 Query: 123 ----------HHSPEIYPGIS 133 + P I G+ Sbjct: 167 TAYGYGLGDGWNRPTIIGGVL 187 >gi|254447932|ref|ZP_05061396.1| riboflavin biosynthesis protein RibD [gamma proteobacterium HTCC5015] gi|198262358|gb|EDY86639.1| riboflavin biosynthesis protein RibD [gamma proteobacterium HTCC5015] Length = 363 Score = 91.1 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 18/148 (12%) Query: 8 MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+ A R+ VG V ++++ ++ HAE+ A++ Sbjct: 1 MARALQLAAKGLYSTRSNPRVGCVIARGERVLAEGYHQRPGEG----HAEVRALQALPE- 55 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 S+ L YVTLEPC+ C+ A+ A I R+ +P +G Sbjct: 56 -SESDLSTATAYVTLEPCSHYGKTGPCSEALIKAGIGRVVAAMVDPNPDVAGSGLARLQQ 114 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R + F + Sbjct: 115 AG----VEVGSGLLESEARSLNPGFIQR 138 >gi|302919326|ref|XP_003052839.1| hypothetical protein NECHADRAFT_67750 [Nectria haematococca mpVI 77-13-4] gi|256733779|gb|EEU47126.1| hypothetical protein NECHADRAFT_67750 [Nectria haematococca mpVI 77-13-4] Length = 482 Score = 91.1 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 32/56 (57%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 F+ AL+ A+ A NE PVG V V + K+I+R N ++ T HAEI+A+ Sbjct: 175 HMKFIEEALDMARLALRTNETPVGCVLVHDGKVIARGMNATNVTRNGTRHAEIMAL 230 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 40/114 (35%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL----------AT 121 E LYVT+EPC MCA+ + I+++Y+GA N K GG + A+ Sbjct: 302 RECILYVTVEPCVMCASLLRQLGIKKVYFGAVNDKFGGTGGVFSIHANSLPISADGQTAS 361 Query: 122 CHHSP------------------------------EIYPGISEQRSRQIIQDFF 145 H +P EI G + +++ F+ Sbjct: 362 AHPTPKPAQLPDGSGTLGVSYPPGGGDGGNIESGYEIEGGWGRDDAVGLLRRFY 415 >gi|29840652|ref|NP_829758.1| riboflavin biosynthesis protein RibD [Chlamydophila caviae GPIC] gi|29835002|gb|AAP05636.1| riboflavin biosynthesis protein RibD [Chlamydophila caviae GPIC] Length = 368 Score = 90.7 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ FM A+E + P VG V V N +II + R HAE AI Sbjct: 6 EQQLFFMRRAIELGEKGRFSAPPNPWVGCVIVKNGQIIGEGYHEKRGQL----HAEENAI 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + + ++YVTLEPC C + ++ +Y +P G Sbjct: 62 NS-----TSVSVEGSEVYVTLEPCCHYGNTPPCVNLLIKHKVSTVYVALLDPDSRVAGKG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 A ++ G+ ++ + + ++ + +R Sbjct: 117 VASLKEAG----IRVFEGLGKKEAEESLKSYIHQR 147 >gi|330752436|emb|CBL87386.1| riboflavin biosynthesis protein [uncultured Flavobacteria bacterium] Length = 310 Score = 90.7 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 17/125 (13%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VG + V +++II +HAE+ AI+ + +QE+L LYVTLEPC Sbjct: 2 VGCLIVKDDEIIGEGYTDPYGG----SHAEVNAIKS---VKNQELLKSATLYVTLEPCSH 54 Query: 84 ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C I +I R+ G +P G + C ++ G+ E + Sbjct: 55 HGKTPPCCDLILSRQIPRVVIGCIDPHEKVCGQGIARLKASGC----QVIVGVEEALCKL 110 Query: 140 IIQDF 144 + F Sbjct: 111 HHKRF 115 >gi|111022118|ref|YP_705090.1| cytosine deaminase [Rhodococcus jostii RHA1] gi|110821648|gb|ABG96932.1| cytosine deaminase [Rhodococcus jostii RHA1] Length = 159 Score = 90.7 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 15/145 (10%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 ++ A+ EA+ IP+GA + ++ NR + D + H E A R Sbjct: 15 EELLTVAIAEAELGKREGGIPIGAALFAGDGSLLGSGRNRRVQHADPSVHGETDAFRAAG 74 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 R Q + TL PC C+ + I + G S GG E + Sbjct: 75 R---QRDYRSTIMVTTLSPCWYCSGLVRQFNIGAIVVGESVTFTGGHEWLRE-------- 123 Query: 124 HSPEIYPGISEQR-SRQIIQDFFKE 147 + ++ + + ++ +F + Sbjct: 124 NGVDVT--VLRDQHCIDLMTEFIEN 146 >gi|150396042|ref|YP_001326509.1| riboflavin biosynthesis protein RibD [Sinorhizobium medicae WSM419] gi|150027557|gb|ABR59674.1| riboflavin biosynthesis protein RibD [Sinorhizobium medicae WSM419] Length = 398 Score = 90.7 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 49/150 (32%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM+ AL ++ R P VG V V I+ RA HAE A+ Sbjct: 7 EDERFMAAALRLSRRNLGRTGTNPSVGCVIVNEGMIVGRA----VTASGGRPHAETQALA 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC C A+ + + R+ +P G Sbjct: 63 EAGEKA-----RGATAYVTLEPCSHHGKTPPCTDALIASGVARVVVAILDPDERVAGRGI 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + G+ + + +Q + Sbjct: 118 VLLREAG----IAVDIGVLREEGERALQAY 143 >gi|146341344|ref|YP_001206392.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Bradyrhizobium sp. ORS278] gi|146194150|emb|CAL78171.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase [Bradyrhizobium sp. ORS278] Length = 383 Score = 90.7 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 52/154 (33%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL + R VGAV V + I+ R + HAE A+R Sbjct: 21 DRRFMQLALTLGRRGQGRTWPNPAVGAVVVKDGVIVGRGWTQPGGR----PHAEPEALRR 76 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 LYVTLEPC CA A+ A I R+ +P G Sbjct: 77 AGEAA-----KGATLYVTLEPCSHFGKSPPCADAVIAAGISRVVSAVEDPNPEVAAQGHA 131 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ +++ F+ R Sbjct: 132 KLRAAG----IQVEVGLCSADAKRDHAGHFRRIR 161 >gi|260753016|ref|YP_003225909.1| riboflavin biosynthesis protein RibD [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552379|gb|ACV75325.1| riboflavin biosynthesis protein RibD [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 323 Score = 90.7 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 24/157 (15%) Query: 1 MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57 ++ +M A+ + VG + V +N+II R ++ HAE + Sbjct: 4 LENDIRWMQAAIALGERSKGLTAPSPSVGCIIVNKDNQIIGRGWTQSGGR----PHAEAM 59 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+ + L +YVTLEPC C+ ++ A+ R+ +P Sbjct: 60 ALSQ------CQSLKGATVYVTLEPCAHKSNRGPTCSDSLVAAQPERVVIACRDPDHRTN 113 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G A ++ G+ E+++ Q + FF Sbjct: 114 GQGISKMVAAG----IKVECGLLEKQAAQSMSGFFSR 146 >gi|162447960|ref|YP_001621092.1| riboflavin biosynthesis protein [Acholeplasma laidlawii PG-8A] gi|161986067|gb|ABX81716.1| riboflavin biosynthesis protein [Acholeplasma laidlawii PG-8A] Length = 357 Score = 90.7 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 21/148 (14%) Query: 6 VFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A A N P VGAV + + K+I + ++ HAE+ AI Sbjct: 8 KYMKQAFNLAIKGEGFVNPNPLVGAVIIKDGKVIGKGYHKAFGQ----VHAEVDAINHA- 62 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 E + ++VTLEPC CA + I+ +Y +P + G + Sbjct: 63 ----TEDVAGATMFVTLEPCSHHGKQPPCAFKLIEKGIKEVYIANLDPNPLVYKQGVKVL 118 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145 A +++ GI + ++ FF Sbjct: 119 EDAG----IKVHYGILDDLGLKVNDIFF 142 >gi|170581814|ref|XP_001895850.1| Cytidine and deoxycytidylate deaminase zinc-binding region family protein [Brugia malayi] gi|158597081|gb|EDP35311.1| Cytidine and deoxycytidylate deaminase zinc-binding region family protein [Brugia malayi] Length = 292 Score = 90.7 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 12/111 (10%) Query: 27 GAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC---RILSQEIL----PEVDLYV 78 G V V ++++++GNRN HA + A+ C R +IL D+Y+ Sbjct: 180 GCVIVDLKGEVVAKSGNRNI----PLGHAVMAAVSDLCERHRTKQSDILQYLGTGFDVYL 235 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 T EPC MCA A+ R+ R++YG P G E+ + + +H ++ Sbjct: 236 TDEPCAMCAMALVHFRVGRVFYGKRAPLDGVYESCWRIQEEKSLNHHYTVF 286 >gi|307153764|ref|YP_003889148.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 7822] gi|306983992|gb|ADN15873.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 7822] Length = 369 Score = 90.7 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 54/149 (36%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M + A+ A P VGAV V +I+ + HAE+ A+ + Sbjct: 13 DREMMQRCITLARKALGATSPNPMVGAVIVREQEIVGEGFH----PGAGQPHAEVFALSV 68 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +Y+ LEPC C A+ A I ++ G +P G + Sbjct: 69 AAEKA-----KGATIYINLEPCNHYGRTPPCTEALIKAGIAKVMVGMIDPDPRVSGKGIE 123 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 T A E+ GI E+ R++ + F Sbjct: 124 RLTEAG----IEVVAGIEEEACRRLNEGF 148 >gi|56551372|ref|YP_162211.1| riboflavin biosynthesis protein RibD [Zymomonas mobilis subsp. mobilis ZM4] gi|56542946|gb|AAV89100.1| riboflavin biosynthesis protein RibD [Zymomonas mobilis subsp. mobilis ZM4] Length = 323 Score = 90.7 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 24/157 (15%) Query: 1 MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57 ++ +M A+ + VG + V +N+II R ++ HAE + Sbjct: 4 LENDIRWMQAAIALGERSKGLTAPSPSVGCIIVNKDNQIIGRGWTQSGGR----PHAEAM 59 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+ + L +YVTLEPC C+ ++ A+ R+ +P Sbjct: 60 ALSQ------CQSLKGATVYVTLEPCAHKSNRGPTCSDSLVAAQPERVVIACRDPDPRTN 113 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G A ++ G+ E+++ Q + FF Sbjct: 114 GQGISKMVAAG----IKVECGLLEKQAAQSMSGFFSR 146 >gi|329118503|ref|ZP_08247207.1| riboflavin biosynthesis protein RibD [Neisseria bacilliformis ATCC BAA-1200] gi|327465238|gb|EGF11519.1| riboflavin biosynthesis protein RibD [Neisseria bacilliformis ATCC BAA-1200] Length = 374 Score = 90.7 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 54/151 (35%), Gaps = 21/151 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M AL A+ + P VG V +I+ + + HAE+ A+ Sbjct: 10 DTDRRHMRTALALAREGRFTTSPNPRVGCVIARGGQIVGQGFHLRAGE----PHAEVHAL 65 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + YVTLEPC CA A+ A + R+ S+P G Sbjct: 66 RQAGELA-----RGATAYVTLEPCAHHGRTPPCAQALIAAGVSRVVAAVSDPNPQVAGKG 120 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 LA + E G+ E +R++ F Sbjct: 121 --LAMLAAAGIAAEC--GLFEAEARELNHGF 147 >gi|320354106|ref|YP_004195445.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Desulfobulbus propionicus DSM 2032] gi|320122608|gb|ADW18154.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Desulfobulbus propionicus DSM 2032] Length = 368 Score = 90.4 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 54/145 (37%), Gaps = 21/145 (14%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL EA+ R VGAV V + K++ R + T HAE+ A+ Sbjct: 5 HEWYMELALAEARKGLGRTSPNPAVGAVVVKDGKVVGRGYHHRA----GTPHAEVHALAD 60 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +YVTLEPC C AI A I + G ++P G Sbjct: 61 AG-----PQARGATIYVTLEPCNHTGRTPPCTEAILAAGIAMVVIGMADPNPRVAGGGAA 115 Query: 116 FYTLATCHHSPEIYPGISEQRSRQI 140 + E+ G+ EQ R + Sbjct: 116 YLRQRGL----EVVSGVLEQPCRAL 136 >gi|190891194|ref|YP_001977736.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Rhizobium etli CIAT 652] gi|190696473|gb|ACE90558.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase protein [Rhizobium etli CIAT 652] Length = 455 Score = 90.4 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 47/142 (33%), Gaps = 21/142 (14%) Query: 3 KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM+ A+ ++ VG + V + I+ +A HAE A+ Sbjct: 6 DDEGFMAAAIRLSRQHLGRTATNPSVGCLIVKDGVIVGQA----VTALGGRPHAEPQALA 61 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 ++ YVTLEPC CA A+ + R+ ++P G Sbjct: 62 EAGQLA-----RGATAYVTLEPCSHHGKTPPCAEALIAYGVARVVISVTDPDPRVSGRGI 116 Query: 115 QFYTLATCHHSPEIYPGISEQR 136 A E+ G+ E Sbjct: 117 TMLRDAG----IEVDAGVLEAE 134 >gi|167816999|ref|ZP_02448679.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 91] Length = 369 Score = 90.4 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 52/145 (35%), Gaps = 18/145 (12%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A P VG V V ++ +I + HAE+ A++ R Sbjct: 1 MQRALALAARGMYTTTPNPRVGCVIVKDDVVIGEGFTQPAGQD----HAEVQALKDA-RA 55 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L + +YVTLEPC CA + AR+ ++ +P G Sbjct: 56 RGN-DLRDATVYVTLEPCSHFGRTPPCAHTLIDARVGKVVAAMEDPNPQVSGRGLAMLRD 114 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ + ++ F Sbjct: 115 AG----IDVRCGLLAHEAHEMNIGF 135 >gi|21225535|ref|NP_631314.1| hypothetical protein SCO7258 [Streptomyces coelicolor A3(2)] gi|256783445|ref|ZP_05521876.1| hypothetical protein SlivT_03045 [Streptomyces lividans TK24] gi|289767322|ref|ZP_06526700.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|4835337|emb|CAB42959.1| hypothetical protein [Streptomyces coelicolor A3(2)] gi|289697521|gb|EFD64950.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 161 Score = 90.4 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 11/151 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + +E A A + P G+V V + +++ NR D T H E R L Sbjct: 11 LRRCVELAAQALEAGDEPFGSVLVGADGSVLAEDHNRV-ASGDRTRHPEFELARWSAARL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-GGGIENGTQFYTLATCHHS 125 + + +Y + E C MCAAA + + R+ Y AS+ + G +E Sbjct: 70 TPDERAAATVYTSGEHCPMCAAAHAWVGLGRIVYVASSEQLAGWLEELGVPAAPVRPLPV 129 Query: 126 PEIYPGI--------SEQRSRQIIQDFFKER 148 E+ PG+ + + + F+ R Sbjct: 130 REVAPGVTVEGPVPQLTREIHALHRRFYAGR 160 >gi|330815804|ref|YP_004359509.1| Pyrimidine reductase, riboflavin biosynthesis [Burkholderia gladioli BSR3] gi|327368197|gb|AEA59553.1| Pyrimidine reductase, riboflavin biosynthesis [Burkholderia gladioli BSR3] Length = 372 Score = 90.4 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL+ + + P VG V V + +I + HAE+ A+ Sbjct: 4 ESDFAHMQRALDLSSRGMYTTSPNPRVGCVIVKDEVVIGEGYTQPAGQD----HAEVQAM 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + L +YVTLEPC CA + AR+ ++ +P G Sbjct: 60 KDA--RSRGHDLRGATVYVTLEPCSHFGRTPPCALGLIDARVAKVVAAMEDPNPLVSGKG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ Q +R++ F Sbjct: 118 LGMLRDAG----IEVRCGLLAQEAREMNIGF 144 >gi|309378405|emb|CBX22958.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 369 Score = 90.4 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL+ A + P VG V +++ + + HAE+ A+ Sbjct: 4 ETDISMMQNALKLAALGRFSTSPNPRVGCVIAQGGQVVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + +VTLEPC CA A+ A + R+ +P G Sbjct: 60 RQAGEMA-----KGATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E +R++ + F + RR Sbjct: 115 LALLEAAGI--KTEC--GLLESEARELNRGFLSRIERRR 149 >gi|323164205|gb|EFZ50012.1| riboflavin biosynthesis protein RibD [Shigella sonnei 53G] gi|323170496|gb|EFZ56146.1| riboflavin biosynthesis protein RibD [Escherichia coli LT-68] Length = 361 Score = 90.4 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+RM Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALRMAGEK 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC C A+ A + R+ +P G Sbjct: 57 A-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQ 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 112 AG----IDVSHGLMMSEAEQLNKGFLKRMR 137 >gi|108805629|ref|YP_645566.1| CMP/dCMP deaminase [Rubrobacter xylanophilus DSM 9941] gi|108766872|gb|ABG05754.1| CMP/dCMP deaminase, zinc-binding protein [Rubrobacter xylanophilus DSM 9941] Length = 194 Score = 90.4 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 12/149 (8%) Query: 8 MSCALEEAQNAAL-RNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A+E ++ R P GA ++++ N AHAE++AI + R Sbjct: 32 MRLAVELSRLNVEHRTGGPFGAAIFEEESGRLLAPGVNLVVPSSCSVAHAEVVAIMVAQR 91 Query: 65 ILSQEILPE-----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L L L+ + EPC MC A + + +R L GA + + Sbjct: 92 SLGHFDLGGPGMPRYQLFASTEPCAMCFGATTWSGVRSLVCGARDEDARAVGFDEGAKVE 151 Query: 120 ATC----HHSPEIYPGISEQRSRQIIQDF 144 + + + + +++ + Sbjct: 152 RWISALEERGISVRRDVLREEAAAVLRRY 180 >gi|66823805|ref|XP_645257.1| hypothetical protein DDB_G0272442 [Dictyostelium discoideum AX4] gi|60473427|gb|EAL71373.1| hypothetical protein DDB_G0272442 [Dictyostelium discoideum AX4] Length = 241 Score = 90.4 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 15/142 (10%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M AL++A + GA V N ++ A N + H EI AI Sbjct: 65 HEKYMRIALDKAIEHNSK----FGAAIVHKNGTLMCTAANTGEGSR--ILHGEIRAILNC 118 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA-- 120 ++ QE + +Y T EPC MC+AA+ + ++ +G+ TQ A Sbjct: 119 TQLYQQETWEDYYMYTTGEPCPMCSAALLWTKFEKVIFGSFISNMYCERCFTQLPMDADR 178 Query: 121 ------TCHHSPEIYPGISEQR 136 +H+ + G+ E + Sbjct: 179 IFRLGYGINHNAVLIGGVLESQ 200 >gi|152981769|ref|YP_001352932.1| cytosine/adenosine deaminase [Janthinobacterium sp. Marseille] gi|151281846|gb|ABR90256.1| cytosine/adenosine deaminase [Janthinobacterium sp. Marseille] Length = 169 Score = 90.4 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 15/158 (9%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRE-LKDVTAHAEILAI 59 + + ++ ++ + R P A+ +I AGN + D T HAE+LA Sbjct: 14 TRDLELLRQSIALSEESKQRGRHPFAALVADEHGNVIVTAGNNSMPPEGDPTQHAELLAA 73 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + LS E L + LY + EPC MC+ AI I R+ Y S G+ Sbjct: 74 ARAAQKLSPEQLAKSTLYTSAEPCCMCSGAIYWTGIGRVVYALSEHNLLGLTG--DHPEN 131 Query: 120 ATC-----------HHSPEIYPGISEQRSRQIIQDFFK 146 T E+ + E + + + F+K Sbjct: 132 PTFSLPCREVFVRGQRQVEVVGPLLEDEAAKAHEGFWK 169 >gi|110804436|ref|YP_687956.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Shigella flexneri 5 str. 8401] gi|110613984|gb|ABF02651.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Shigella flexneri 5 str. 8401] gi|332760694|gb|EGJ90982.1| riboflavin biosynthesis protein RibD [Shigella flexneri 4343-70] gi|333008609|gb|EGK28077.1| riboflavin biosynthesis protein RibD [Shigella flexneri VA-6] Length = 361 Score = 90.4 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+RM Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALRMAGEK 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC C A+ A + R+ +P G Sbjct: 57 A-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQ 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 112 AG----IDVSHGLMMSEAEQLNKGFLKRMR 137 >gi|226200200|ref|ZP_03795745.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei Pakistan 9] gi|225927708|gb|EEH23750.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei Pakistan 9] Length = 384 Score = 90.4 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 51/148 (34%), Gaps = 21/148 (14%) Query: 8 MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL A+ VG V + + +R HAE+ A+R Sbjct: 1 MAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALREAG-- 54 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E YVTLEPC CA A+ A + R+ A +P G Sbjct: 55 ---ERARGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAARLAD 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ ++R++ FF Sbjct: 112 AG----IVVEQGLLAAQARELNIGFFSR 135 >gi|110640675|ref|YP_668403.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli 536] gi|306813120|ref|ZP_07447313.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli NC101] gi|110342267|gb|ABG68504.1| riboflavin biosynthesis protein RibD [Escherichia coli 536] gi|305853883|gb|EFM54322.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli NC101] gi|307552319|gb|ADN45094.1| riboflavin biosynthesis protein RibD [Escherichia coli ABU 83972] Length = 361 Score = 90.4 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+RM Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALRMAGEK 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC C A+ A + R+ +P G Sbjct: 57 A-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQ 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 112 AG----IDVSHGLMMSEAEQLNKGFLKRMR 137 >gi|224067884|ref|XP_002302581.1| predicted protein [Populus trichocarpa] gi|222844307|gb|EEE81854.1| predicted protein [Populus trichocarpa] Length = 378 Score = 90.0 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 23/148 (15%) Query: 6 VFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M +E A+ A + P VG V V + KI+ + K HAE+ A+R Sbjct: 29 FYMRRCVELARKAIGCTSPNPMVGCVIVKDGKIVGEGFH----PKAGQPHAEVFALRDA- 83 Query: 64 RILSQEILPE-VDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 E L E YV+LEPC C+ A+ A+++++ G +P G Q Sbjct: 84 -----EDLAENATAYVSLEPCNHYGRTPPCSEALVKAKVKKVVIGMIDPNPIVASRGVQR 138 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + + G+ E+ +++ + F Sbjct: 139 LRDAGIN----VVVGVEEELCKRLNEAF 162 >gi|116493546|ref|YP_805281.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pediococcus pentosaceus ATCC 25745] gi|116103696|gb|ABJ68839.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pediococcus pentosaceus ATCC 25745] Length = 353 Score = 90.0 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 15/124 (12%) Query: 7 FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +M+ A E A+ P VGAV V NN ++++ + AHAEI A++ Sbjct: 9 YMNLAFEMAEKGKYQTWTNPLVGAVIVKNNVVLAKGYHHQFGA----AHAEIDALQH--- 61 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + + +YV+LEPC CA ++ I+ + G +P G Q Sbjct: 62 LDDLKQARGATMYVSLEPCSHFGKTPPCAKKLAEVGIKAVVVGQKDPNPLVAGRGLQILR 121 Query: 119 LATC 122 A Sbjct: 122 DAGI 125 >gi|319408448|emb|CBI82103.1| Riboflavin biosynthesis protein ribD [Bartonella schoenbuchensis R1] Length = 375 Score = 90.0 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 25/154 (16%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNK----IISRAGNRNRELKDVTAHAEI 56 + N FM+ A+ AQ L + P VGA+ V ++ I+ HAE+ Sbjct: 7 QDNRFMAAAIRLAQRHIGLTGQNPSVGALIVRDDDGKASIVGYG----VTAIHGRPHAEV 62 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 A+ M + YVTLEPC+ C A+ + I R+ ++P Sbjct: 63 QALLMAGPLSH-----GATAYVTLEPCSHYGETSPCVNALIDSGISRVVIALTDPDKRVC 117 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A E+ G+ + + + + + Sbjct: 118 GRGIALLRAAG----IEVVEGVLAREAFETLSAY 147 >gi|82701141|ref|YP_410707.1| riboflavin biosynthesis protein RibD [Nitrosospira multiformis ATCC 25196] gi|82409206|gb|ABB73315.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Nitrosospira multiformis ATCC 25196] Length = 366 Score = 90.0 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 52/150 (34%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM+ AL A+ + P VG V V + +++ + AHAEI Sbjct: 5 TDYRFMAQALRLAEKGLYSTSPNPRVGCVLVRDGQVVGTGWHERAGE----AHAEIN--- 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + Y+TLEPC CA A+ A + ++ +P G Sbjct: 58 --ALAAAGPAARGALAYLTLEPCSHYGRTPPCADALVQAGVAKVITAMQDPNPLVAGRGC 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E ++ + F Sbjct: 116 ALLEEAG----IEVKTGLMEAEAKALNIGF 141 >gi|212528944|ref|XP_002144629.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224] gi|210074027|gb|EEA28114.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224] Length = 162 Score = 90.0 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 1/102 (0%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ + A+ A + P G+V V +II NR DVT H E Sbjct: 5 NDINYLRRCVVLAREALEAGDAPFGSVLVNAAGEIIKEDRNRVVTQADVTWHPEFTLAGW 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + L+Q +Y + E C MCA A + A + R+ Y +S Sbjct: 65 AQKNLTQTERAAATVYTSGEHCPMCATAHAYAGLGRIVYASS 106 >gi|224009578|ref|XP_002293747.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220970419|gb|EED88756.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 256 Score = 90.0 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 54/159 (33%), Gaps = 21/159 (13%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNK----IISRAGNRNRELKDVTAHAE 55 M A+ A+ VG V V + II + K HAE Sbjct: 99 TSDVQHMKLAVRLARIGYGNTFPNPAVGCVLVSHGDDSSSIIGSGFH----PKAGMPHAE 154 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109 + A+ C V YVTLEPC CA ++ +A I R+ G +P Sbjct: 155 VFALLEACGHDHFAD-SNVTAYVTLEPCCHEGQTPPCALSLVVAGINRVVVGFRDPNPRV 213 Query: 110 IENGTQFYTLATCH-HSPEIYPGISEQRSRQIIQDFFKE 147 G Q A H E+ Q ++++ F K Sbjct: 214 DGGGIQLLKDAGIDVHVMEVES---AQECTKLVEYFVKR 249 >gi|120553775|ref|YP_958126.1| riboflavin biosynthesis protein RibD [Marinobacter aquaeolei VT8] gi|120323624|gb|ABM17939.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Marinobacter aquaeolei VT8] Length = 363 Score = 90.0 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 49/148 (33%), Gaps = 21/148 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ A++ A + P VG V + I+ + AHAE+ A+ Sbjct: 2 MARAVQLAWRGRYSTHPNPRVGCVIAKGDLIVGEGWHERAGE----AHAEVRALSQAGHE 57 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC CA A+ A + ++ +P G Sbjct: 58 A-----RGATAYVTLEPCSHYGRTPPCARALIDAGVAHVFAATKDPNPSVSGRGLDMLRE 112 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ + ++ F K Sbjct: 113 AG----IRVTEGVMADEAARLNPGFMKR 136 >gi|320661180|gb|EFX28611.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli O55:H7 str. USDA 5905] Length = 361 Score = 90.0 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+RM Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALRMAGEK 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC C A+ A + R+ +P G Sbjct: 57 A-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQ 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 112 AG----IDVSHGLMMSEAEQLNKGFLKRMR 137 >gi|238760662|ref|ZP_04621787.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia aldovae ATCC 35236] gi|238701127|gb|EEP93719.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia aldovae ATCC 35236] Length = 369 Score = 90.0 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 55/157 (35%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ +M+ A E A+ + P VG V V +I+ + HAE+ A Sbjct: 1 MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVREGEIVGEGYHLRAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM YVTLEPC CA A+ A + R+ +P Sbjct: 57 LRMAGEKA-----RGATAYVTLEPCSHHGRTPPCADALVAAGVVRVVAAMQDPNPQVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A + G+ + + + F K R Sbjct: 112 GLYLLKQAG----IAVDHGVMLAEAEAVNRGFLKRMR 144 >gi|302549165|ref|ZP_07301507.1| cytidine/deoxycytidylate deaminase [Streptomyces viridochromogenes DSM 40736] gi|302466783|gb|EFL29876.1| cytidine/deoxycytidylate deaminase [Streptomyces viridochromogenes DSM 40736] Length = 161 Score = 90.0 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 17/151 (11%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++ +E A A + P G+V V + ++ NR D T H E R Sbjct: 10 YLRRCVELAAEALDAGDEPFGSVLVGGDGTVLGEDHNRV-ASGDHTRHPEFELARWSASH 68 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L+ E +Y + E C MCAAA + + R+ Y AS+ + + + + Sbjct: 69 LTPEERAAATVYTSGEHCPMCAAAHAWVGLGRIVYVASSEQ---LASWLDELGVPAPPVR 125 Query: 126 P----EIYPGI--------SEQRSRQIIQDF 144 ++ PG+ +R R++ F Sbjct: 126 TLPVHDVAPGVVVDGPVPELAERIRELHARF 156 >gi|302879548|ref|YP_003848112.1| riboflavin biosynthesis protein RibD [Gallionella capsiferriformans ES-2] gi|302582337|gb|ADL56348.1| riboflavin biosynthesis protein RibD [Gallionella capsiferriformans ES-2] Length = 366 Score = 90.0 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 54/150 (36%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + +M+ AL+ A+ + P VG V V + ++ ++ HAE+ A+ Sbjct: 5 EDSRWMAQALQLAERGLYSTSPNPRVGCVLVRDGNLLGAGWHKKAGE----PHAEVYALL 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC C A+ A + R+ +P G Sbjct: 61 DAGDAAH-----GATAYVTLEPCSHYGRTPPCCDALIHAGVARVVVAMQDPNPQVAGRGI 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + G+ E +R++ F Sbjct: 116 AKLRAAG----ISVDCGLMEAAARELNAGF 141 >gi|320656030|gb|EFX23946.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320665156|gb|EFX32249.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Escherichia coli O157:H7 str. LSU-61] Length = 361 Score = 90.0 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+ AQ + P VG V V + +I+ ++ HAE+ A+RM Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALRMAGEK 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC C A+ A + R+ +P G Sbjct: 57 A-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQ 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 112 AG----IDVSHGLMMSEAEQLNKGFLKRMR 137 >gi|260434096|ref|ZP_05788067.1| riboflavin biosynthesis protein RibD [Silicibacter lacuscaerulensis ITI-1157] gi|260417924|gb|EEX11183.1| riboflavin biosynthesis protein RibD [Silicibacter lacuscaerulensis ITI-1157] Length = 366 Score = 90.0 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 50/148 (33%), Gaps = 25/148 (16%) Query: 2 KKGNVFMSCALEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 +M+ AL + + VG V V N +I+ R + HAE + Sbjct: 3 DTDKRYMALALSLGRRG--QGMCWPNPAVGCVVVKNGRIVGRGWTQPGGR----PHAETV 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ + YV+LEPC CA A+ A + R+ + Sbjct: 57 ALAQAGLLA-----RGSTAYVSLEPCAHHGKTPPCAQALIDAGVARVVSAIEDSDPRVAG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQ 139 G + A ++ G+ ++ + Sbjct: 112 LGFEMLRAAG----VDVTTGVLADQAAR 135 >gi|296126557|ref|YP_003633809.1| riboflavin biosynthesis protein RibD [Brachyspira murdochii DSM 12563] gi|296018373|gb|ADG71610.1| riboflavin biosynthesis protein RibD [Brachyspira murdochii DSM 12563] Length = 368 Score = 90.0 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 41/163 (25%), Positives = 63/163 (38%), Gaps = 29/163 (17%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-----P-VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55 +M A+EEA+ E P VGAV V ++KII ++ HAE Sbjct: 4 NTHEKYMRMAIEEAKK----GEGFTSPNPLVGAVIVKDDKIIGIGYHQKYGEN----HAE 55 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109 I A + E + +YVTLEPC CA AI +I+++ G + Sbjct: 56 INAFLDAQKK--GEDVEGAAIYVTLEPCSHYGKTPPCADAIIKNKIKKVIIGCVDSNPKV 113 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 NG + A + + R++ + FF +R Sbjct: 114 AGNGIKKLKDAGIEVVVNVLE----EECRKLNEVFFYYIANKR 152 >gi|328876514|gb|EGG24877.1| cytidine deaminase-like protein [Dictyostelium fasciculatum] Length = 504 Score = 90.0 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 40/67 (59%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 LY++ EPC MC+ A+ +RI R+ YG+ GGG+ + + +T + +H ++Y G+ E+ Sbjct: 390 LYLSREPCVMCSMALVHSRIERVIYGSQQHNGGGLGSCFRIHTEKSVNHKFQVYRGLMEK 449 Query: 136 RSRQIIQ 142 ++ Sbjct: 450 ECLELFS 456 Score = 40.3 bits (94), Expect = 0.080, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN---KIISR 39 MK+ +M A+E+A A + P+G V V N IIS Sbjct: 250 MKQ---YMKLAIEQANIAKSKGYRPIGGVLVDPNTNTTIISS 288 >gi|307543864|ref|YP_003896343.1| hypothetical protein HELO_1275 [Halomonas elongata DSM 2581] gi|307215888|emb|CBV41158.1| hypothetical protein HELO_1275 [Halomonas elongata DSM 2581] Length = 157 Score = 90.0 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 2/103 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + A A + P G+V V + K+++ NR D T H E R Sbjct: 4 DTDMAHLRRCVALAAEALEHGDEPFGSVLVGADGKVLAEDRNR-IAGGDSTRHPEFALAR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L E +Y + E C MCAAA + + R+ Y +S Sbjct: 63 WAAENLPAESRAAATVYTSGEHCPMCAAAHAWVGLGRIVYASS 105 >gi|170783175|ref|YP_001711509.1| riboflavin biosynthesis protein RibD [Clavibacter michiganensis subsp. sepedonicus] gi|169157745|emb|CAQ02947.1| riboflavin biosynthesis protein RibD [Clavibacter michiganensis subsp. sepedonicus] Length = 355 Score = 90.0 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 54/143 (37%), Gaps = 21/143 (14%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M LE A P VG V + + ++I+ +R +AHAE+ A+R Sbjct: 24 MRRGLELAAEGPAWGPNPRVGCVILDASGRVIAEGRHR----GAGSAHAEVDALRQ---- 75 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L VTLEPC CAAA+ A + R+ Y ++P + Sbjct: 76 LPAGGARGATAVVTLEPCNHTGRTGPCAAALVEAGVARVAYAVADPGAESSGGAARLRAA 135 Query: 120 ATCHHSPEIYPGISEQRSRQIIQ 142 E+ PG+ + +Q Sbjct: 136 -----GVEVVPGVLADEAAAFLQ 153 >gi|300312948|ref|YP_003777040.1| bifunctional diaminohydroxyphosphoribosyl aminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Herbaspirillum seropedicae SmR1] gi|300075733|gb|ADJ65132.1| bifunctional enzyme: diaminohydroxyphosphoribosyl aminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase protein [Herbaspirillum seropedicae SmR1] Length = 354 Score = 89.6 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 56/151 (37%), Gaps = 20/151 (13%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M+ AL +A L + P VG V V + +II + HAEI A+ Sbjct: 1 MALALIQAGFGML-DTTPNPRVGCVIVKDQRIIGAGFTQPPGGN----HAEIQAMADAAA 55 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +YVTLEPC CA A+ A + R+ ++P G Sbjct: 56 RGHDVR--GATVYVTLEPCSHFGRTPPCADALIRAGVARVVAAIADPNPMVAGQGLARLQ 113 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ E+ +R I F R Sbjct: 114 AAG----IEVSCGLLEEEARDINIGFLHRMR 140 >gi|220912436|ref|YP_002487745.1| riboflavin biosynthesis protein RibD [Arthrobacter chlorophenolicus A6] gi|219859314|gb|ACL39656.1| riboflavin biosynthesis protein RibD [Arthrobacter chlorophenolicus A6] Length = 373 Score = 89.6 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M ALE A VGAV V + + ++ +R TAHAE A+ Sbjct: 19 MEHALEAALQGPRGANPLVGAVVVSPDGRELATGYHR----GAGTAHAEADAV--ARARE 72 Query: 67 SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + VTLEPC C AI A I + Y +P Sbjct: 73 AGVDLAGCTMVVTLEPCNHVGRTGPCTEAIIAAGITDVVYAVDDPHDPAAGGAATL---- 128 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 + + G++ S ++ + +F E+R Sbjct: 129 -RNAGISVRSGLAAAESLELNRRWFEAVAEKR 159 >gi|217978262|ref|YP_002362409.1| riboflavin biosynthesis protein RibD [Methylocella silvestris BL2] gi|217503638|gb|ACK51047.1| riboflavin biosynthesis protein RibD [Methylocella silvestris BL2] Length = 370 Score = 89.6 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 49/142 (34%), Gaps = 21/142 (14%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM+ A+ A+ VGA+ V + +++R HAE A+R Sbjct: 7 DERFMAAAIALARRGLGVCAPNPAVGALIVKDGVVLARGW----TQAGGRPHAEAEALRQ 62 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 LYVTLEPC CA A+ + I R+ +P G + Sbjct: 63 AGDKS-----RGSTLYVTLEPCSHHGKTPPCAEAVIASGIARVASAIEDPDPRVAGRGHE 117 Query: 116 FYTLATCHHSPEIYPGISEQRS 137 A + G+ Q + Sbjct: 118 LLRAAGL----IVRTGVCAQAA 135 >gi|255067329|ref|ZP_05319184.1| riboflavin biosynthesis protein RibD [Neisseria sicca ATCC 29256] gi|255048480|gb|EET43944.1| riboflavin biosynthesis protein RibD [Neisseria sicca ATCC 29256] Length = 365 Score = 89.6 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 54/149 (36%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M AL A+ + P VG V ++I+ + + HAE+ A+R Sbjct: 6 DTQMMQNALALARLGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHALRQ 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ + + R+ ++P G Sbjct: 62 AGEMA-----RGATAYVTLEPCSHYGRTPPCAEALIGSGVSRVVAAMTDPNPLVAGKGLA 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E G+ E +R++ + F Sbjct: 117 MLEAAGI--RTE--SGLLETEARELNRGF 141 >gi|332529818|ref|ZP_08405772.1| cmp/dcmp deaminase zinc-binding protein [Hylemonella gracilis ATCC 19624] gi|332040839|gb|EGI77211.1| cmp/dcmp deaminase zinc-binding protein [Hylemonella gracilis ATCC 19624] Length = 158 Score = 89.6 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 57/152 (37%), Gaps = 19/152 (12%) Query: 8 MSCALEEAQNAALR-NEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCR 64 + A + A+ A P GA+ V + +++ GN D HAE + R Sbjct: 5 LKRANDVARRARDELGRHPFGAILVAPDGETVLAEQGNV-----DTVNHAESVLARTAAL 59 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTL---- 119 E L L T+EPC MCA A I RL YG S + + + + T+ Sbjct: 60 NYPGEYLGRCTLVTTVEPCAMCAGTQYWANIGRLVYGLSERRLLALTGSHEENPTMDLPC 119 Query: 120 ----ATCHHSPEIYPGI--SEQRSRQIIQDFF 145 A E+ + E + +DF+ Sbjct: 120 RTVFAAGQKPIEVLGPVTEMEDEIAALHRDFW 151 >gi|253996924|ref|YP_003048988.1| riboflavin biosynthesis protein RibD [Methylotenera mobilis JLW8] gi|253983603|gb|ACT48461.1| riboflavin biosynthesis protein RibD [Methylotenera mobilis JLW8] Length = 372 Score = 89.6 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 17/121 (14%) Query: 2 KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M+ AL A + VG V V + +I+ + + HAE+ A+ Sbjct: 6 TSDHTYMNLALRLAAQGLYTTQPNPRVGCVIVRDQQIVGQGAHHKAGE----PHAEVFAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + D+YVTLEPC C A+ A+ +R+ +P G Sbjct: 62 RQAGALA-----EGADVYVTLEPCSHFGRTPPCVQAVIAAKPKRVVIAMQDPNPLVAGRG 116 Query: 114 T 114 Sbjct: 117 V 117 >gi|254498335|ref|ZP_05111074.1| cytidine/deoxycytidylate deaminase [Legionella drancourtii LLAP12] gi|254352443|gb|EET11239.1| cytidine/deoxycytidylate deaminase [Legionella drancourtii LLAP12] Length = 157 Score = 89.6 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 15/151 (9%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGC 63 + FM+ +E A + + P GA+ V ++ +I+ ++ N H E+ I Sbjct: 6 HDFMTATIEIAASNPIA---PYGAIIVYDDKEILLKSVNS--AHHHPLMHGELSVIHTLF 60 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI------ENGTQFY 117 + ++ LY T EPC MCAAAI A I ++ YG S P + T+ + Sbjct: 61 NKGFNGDVSKLSLYTTAEPCPMCAAAIYWAMIPKVVYGTSIPFLHDLFGRQIEVRATEIF 120 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + ++ E+ G+ E Q+ F K + Sbjct: 121 SKTPNFYTCELVGGVKEAECNQL---FIKAK 148 >gi|84687686|ref|ZP_01015559.1| riboflavin biosynthesis protein RibD [Maritimibacter alkaliphilus HTCC2654] gi|84664269|gb|EAQ10760.1| riboflavin biosynthesis protein RibD [Rhodobacterales bacterium HTCC2654] Length = 367 Score = 89.6 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 49/147 (33%), Gaps = 25/147 (17%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 FM AL + + P VG V V +I+ R + HAE++A Sbjct: 2 TDERFMDLALSLGRRGL--GSVWPNPAVGCVIVNGARIVGRGWTQPGGR----PHAEVVA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + YVTLEPC CA A+ A I R+ +P Sbjct: 56 LAQAGEAA-----RGATAYVTLEPCSHHGQTPPCAVALISAGIARVVVALGDPDNRVNGR 110 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQ 139 G A E+ G+ E +R Sbjct: 111 GIAMLRAAG----IEVVTGLGEAEARA 133 >gi|227872741|ref|ZP_03991064.1| hypothetical protein HMPREF6123_1003 [Oribacterium sinus F0268] gi|227841402|gb|EEJ51709.1| hypothetical protein HMPREF6123_1003 [Oribacterium sinus F0268] Length = 83 Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 19/83 (22%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-------------------NKIISRAG 41 MK +M AL A+ AA R ++P+GA+ V + I+ R Sbjct: 1 MKTEKDYMKMALSLAKKAASRGDVPIGALIVYDGTKPDSPMGRLCQAKGILPGTILGRGY 60 Query: 42 NRNRELKDVTAHAEILAIRMGCR 64 NR + + H EILAI C+ Sbjct: 61 NRRNQKNNALYHGEILAIEKACK 83 >gi|269213784|ref|ZP_05982845.2| riboflavin biosynthesis protein RibD [Neisseria cinerea ATCC 14685] gi|269145361|gb|EEZ71779.1| riboflavin biosynthesis protein RibD [Neisseria cinerea ATCC 14685] Length = 361 Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 57/153 (37%), Gaps = 24/153 (15%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL+ A + P VG V ++I+ + + HAE+ A+R + Sbjct: 2 MHQALDLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHALRQAGEM 57 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +VTLEPC CA A+ A + R+ +P G Sbjct: 58 AQ-----GATAFVTLEPCSHYGRTPPCAKALIQAGVSRVVAAMRDPNPLVAGKGLALLEA 112 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 113 AGI--KTEC--GLLENKARELNRGFLSRIERRR 141 >gi|256831920|ref|YP_003160647.1| riboflavin biosynthesis protein RibD [Jonesia denitrificans DSM 20603] gi|256685451|gb|ACV08344.1| riboflavin biosynthesis protein RibD [Jonesia denitrificans DSM 20603] Length = 354 Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 35/112 (31%), Positives = 46/112 (41%), Gaps = 15/112 (13%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ ALE+A VGAV V + + + +R R TAHAE+ A+R C Sbjct: 1 MNVALEQAARGVRGANPLVGAVIVDEHSGDV-AVGHHRGR----GTAHAEVDALR--CAR 53 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 L +YVTLEPC C AI A I R+ +P Sbjct: 54 DRGLRLDAATMYVTLEPCNHYGVTPPCTDAILDAGIPRVVIAGEDPHDVAAG 105 >gi|218676953|ref|YP_002395772.1| Probable riboflavin biosynthesis protein [Vibrio splendidus LGP32] gi|218325221|emb|CAV27160.1| Probable riboflavin biosynthesis protein [Vibrio splendidus LGP32] Length = 145 Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M ALE ++ A + PVG V V N+K++S + HAE+ A+ Sbjct: 2 NQQYMLQALEASRQALPDCQPNPPVGCVLVKNDKVVSVGYTQKVGGN----HAEVEAL-N 56 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 G + + V YVTLEPC CA+ + A ++ + +P G Sbjct: 57 GYDCETDGEMEGVTAYVTLEPCSFVGRTPACASTLVKAGVKHVVVAMLDPDPRNNGRGVA 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 H ++ G+ ++ I F Sbjct: 117 ILES----HGVKVDVGL----CQEQISAF 137 >gi|113868804|ref|YP_727293.1| pyrimidine deaminase/reductase [Ralstonia eutropha H16] gi|113527580|emb|CAJ93925.1| pyrimidine deaminase/reductase [Ralstonia eutropha H16] Length = 371 Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 47/125 (37%), Gaps = 16/125 (12%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VG V V + ++I + + HAEI A++ YVTLEPC Sbjct: 30 VGCVLVKDGQVIGQGFTQPAGQD----HAEIQAMKDALARGLDP--AGSTAYVTLEPCSH 83 Query: 84 ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA A+ A + R+ +P G Q A ++ G+ E+ +R Sbjct: 84 FGRTPPCADALVRAGVARVVAAMEDPNPSVSGRGLQRLREAG----VDVRCGLLEKEARD 139 Query: 140 IIQDF 144 + F Sbjct: 140 LNIGF 144 >gi|290962921|ref|YP_003494103.1| guanine deaminase [Streptomyces scabiei 87.22] gi|260652447|emb|CBG75580.1| putative guanine deaminase [Streptomyces scabiei 87.22] Length = 226 Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 17/155 (10%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM A+E+A+ P GAV V ++ N H E +A+ Sbjct: 65 HERFMRLAVEQARRNPA---WPFGAVIVATRTGRVPGSGVNS--GADSPLLHGEAVAMND 119 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY-GASNP--KGGGIE---NGTQ 115 R LY T EPC+MC +A+ A +RR+ + G+ + + G ++ + + Sbjct: 120 YVRRHGNRGWAATTLYTTGEPCSMCMSALVWANVRRVVWAGSIDEIRRTGIVQIALSAHE 179 Query: 116 FYTLATCHHSPE-IYPGISEQRSRQIIQDFFKERR 149 A ++PE + G+ R+ + Q+ RR Sbjct: 180 VAAAARTFYTPELLLGGVLSDRTDLLFQE---ARR 211 >gi|329903444|ref|ZP_08273466.1| Diamino hydroxy phospho ribosyl amin opyrimidine deaminase [Oxalobacteraceae bacterium IMCC9480] gi|327548371|gb|EGF33053.1| Diamino hydroxy phospho ribosyl amin opyrimidine deaminase [Oxalobacteraceae bacterium IMCC9480] Length = 363 Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 53/155 (34%), Gaps = 18/155 (11%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + M+ ALE A VG V V + ++ + AHAEI A Sbjct: 3 IANDQQGMALALEWAAKGMFITAPNPRVGCVVVRDGVVLGAGHTQAAGQ----AHAEIQA 58 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + + LYVTLEPC CA AI A + R+ ++P Sbjct: 59 LADAQARGNS--VTGATLYVTLEPCSHHGRTPPCADAIIRAGVVRVVSAIADPNPLVAGA 116 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G + A + + + ++ FF Sbjct: 117 GLERLRAAG----IAVTTEVLRDAALEMNIGFFSR 147 >gi|255261262|ref|ZP_05340604.1| riboflavin biosynthesis protein RibD [Thalassiobium sp. R2A62] gi|255103597|gb|EET46271.1| riboflavin biosynthesis protein RibD [Thalassiobium sp. R2A62] Length = 363 Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 53/153 (34%), Gaps = 21/153 (13%) Query: 3 KGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ ALE + R P VG V V + +++ R HAE Sbjct: 2 SDARWMALALELGRRGLGRVWPNPSVGCVIVKDGRVVGRGW----TQDGGRPHAETH--- 54 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + D+YVTLEPC CA A+ A + R+ A + G Sbjct: 55 --ALAAAGTAARGSDVYVTLEPCSHYGHTPPCAQALIDAGVSRVIVAAGDSDPRVSGRGY 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E +R + FFK Sbjct: 113 AMLRDAG----ICVDIGLCESEARNDLAGFFKR 141 >gi|56459161|ref|YP_154442.1| riboflavin-specific deaminase [Idiomarina loihiensis L2TR] gi|56178171|gb|AAV80893.1| Riboflavin-specific deaminase [Idiomarina loihiensis L2TR] Length = 141 Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 25/148 (16%) Query: 5 NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM AL ++ A E PVG V V + ++IS+ + +HAE+ A+ Sbjct: 3 EKFMLEALNISKQALPHCEPNPPVGCVLVKDGEVISKGFTQAIGG----SHAEVEALNA- 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 L V YVTLEPC CA+ + + I+ + +P G + Sbjct: 58 ----HSGDLSGVTAYVTLEPCSFVGRTAACASTLLASGIKHVIIAMLDPDIRNNGKGAEI 113 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 T ++ G+ +++ F Sbjct: 114 LTAGG----VKVEVGL----CAELVAQF 133 >gi|226357300|ref|YP_002787040.1| cytidine/deoxycytidylate deaminase [Deinococcus deserti VCD115] gi|226319290|gb|ACO47286.1| putative Cytidine/deoxycytidylate deaminase, zinc-binding region (CMP/dCMP deaminase, zinc-binding) [Deinococcus deserti VCD115] Length = 221 Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 13/110 (11%) Query: 11 ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNR----------NRELKDVTAHAEILAI 59 AL EA A L P+GA V +++R NR D AHAEI A+ Sbjct: 21 ALSEAWEAYLHGSYPIGACVVDREGHVLARGRNRLGEPRRVEAGVISGHD-LAHAEINAL 79 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 + E L T++PC CA AI+++ +R + Y A +P G Sbjct: 80 LALTDMPRPECYSWTVL-TTVQPCPQCAGAIAMSAVRAVEYAAPDPWAGC 128 >gi|198282613|ref|YP_002218934.1| riboflavin biosynthesis protein RibD [Acidithiobacillus ferrooxidans ATCC 53993] gi|198247134|gb|ACH82727.1| riboflavin biosynthesis protein RibD [Acidithiobacillus ferrooxidans ATCC 53993] Length = 357 Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 54/150 (36%), Gaps = 21/150 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 MS AL A+ + P VGAV V + ++I R + HAE+LA++ Sbjct: 1 MSEALVLAEQGLYSAHPNPCVGAVLVKDGRVIGRGAHLQAGE----PHAEVLALKEAGAA 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC CA A+ A I R+ +P G + Sbjct: 57 ARGAT-----AYVTLEPCSHYGRTPPCADALIAAGIARVVIAMRDPNPLVAGRGVERLRA 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A G E + + F + R Sbjct: 112 AG----VVAEEGCLEAAAEALNPGFLRRMR 137 >gi|307608893|emb|CBW98292.1| hypothetical protein LPW_01491 [Legionella pneumophila 130b] Length = 153 Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 21/153 (13%) Query: 1 MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILA 58 M K FM+ +E A + P GA+ V ++ +I+ ++ N + H E+ Sbjct: 1 MDKYIYDFMAATIEVAVTNPMA---PYGAIIVYDDKEILLKSVNS--AHNNPLMHGELSV 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS----------NPKGG 108 I + ++ LY T EPC MCAAAI A I ++ YG+S + G Sbjct: 56 IHRLFENGFDGDVSKLSLYTTAEPCPMCAAAIYWAMIPKVVYGSSISFLHELFGRQIQVG 115 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141 + ++ +CH + G+ + Q+ Sbjct: 116 AEDILSKTPDFYSCH----VITGVMVEECNQLF 144 >gi|124023623|ref|YP_001017930.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus str. MIT 9303] gi|123963909|gb|ABM78665.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus str. MIT 9303] Length = 368 Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 51/147 (34%), Gaps = 22/147 (14%) Query: 7 FMSCALEEAQNAALRNEI-P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL+ A A R P VGAV + K++ + HAE+ A+ Sbjct: 14 WMRRALQLAALADGRTSPNPLVGAVVLDKAGKLVGEGFHACAGE----PHAEVGALAQAG 69 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 E L VTLEPC C A+ A +RR+ +P G Sbjct: 70 -----EQASGGTLVVTLEPCCHQGRTPPCTQAVIAAGLRRVVVAMQDPDPRVAGAGITRL 124 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ + E + + F Sbjct: 125 RDAGL----EVITAVLEPEAAHQNRAF 147 >gi|32491211|ref|NP_871465.1| hypothetical protein WGLp462 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166418|dbj|BAC24608.1| ribD [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 384 Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 21/154 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 K+ +++ A A+ + P VG V VLN I+ ++ D HAEI A+ Sbjct: 4 KEDLTYLNRAFNLAELGKFTTHPNPNVGCVIVLNKSIVGEGYHK-IPGSD---HAEICAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 ++ + +YVTLEPC CA A+ A+++ + A +P G Sbjct: 60 KLAGK-----YAKGSTVYVTLEPCSHHGKTPSCAQALINAKVKEVIASAVDPNPLVSGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + ++ I ++S ++ FFK Sbjct: 115 FSMLK----NAGIKVKYNIMSEKSIKLNLGFFKR 144 >gi|264677184|ref|YP_003277090.1| riboflavin biosynthesis protein RibD [Comamonas testosteroni CNB-2] gi|262207696|gb|ACY31794.1| riboflavin biosynthesis protein RibD [Comamonas testosteroni CNB-2] Length = 369 Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 19/156 (12%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEIL 57 M FM+ ALE+A A VG V V ++ II + ++ HAE++ Sbjct: 1 MTPSAHFMNKALEQAAQALFLSSPNPRVGCVIVDASERIIGQGF--TQQTGGP--HAEVM 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 A+R + YVTLEPC+ C A+ A I ++ ++P Sbjct: 57 ALRDAAAKGNDVR--GATAYVTLEPCSHHGRTGPCCDALIAAGIGKVVGALTDPNPQVAG 114 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G + A ++ G SR++ FF Sbjct: 115 QGFERLRAAG----VDVEIGPGGAESRELNIGFFSR 146 >gi|218463058|ref|ZP_03503149.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase protein [Rhizobium etli Kim 5] Length = 412 Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 46/141 (32%), Gaps = 21/141 (14%) Query: 4 GNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM+ A+ ++ VG + V + ++ +A HAE A+ Sbjct: 7 DESFMAAAIRLSRRHLGRTATNPSVGCLIVKDGVVVGQA----VTALGGRPHAEPQALAE 62 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +YVTLEPC CA A+ + R+ ++P G Sbjct: 63 AGEAA-----RGGTVYVTLEPCSHHGKTPPCAEALIAYGVARVVISVTDPDPRVSGRGIS 117 Query: 116 FYTLATCHHSPEIYPGISEQR 136 A E+ G+ E Sbjct: 118 MLRDAG----IEVDAGVLEAE 134 >gi|319957427|ref|YP_004168690.1| riboflavin biosynthesis protein ribd [Nitratifractor salsuginis DSM 16511] gi|319419831|gb|ADV46941.1| riboflavin biosynthesis protein RibD [Nitratifractor salsuginis DSM 16511] Length = 336 Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 67/176 (38%), Gaps = 42/176 (23%) Query: 1 MK-KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEI 56 MK +M AL EA VG V +I++ A ++ E HAE+ Sbjct: 1 MKIDDRFYMQLALGEAWRYQGLTYPNPAVGCCVVKEGRILAVEAHHKAGES-----HAEL 55 Query: 57 LAIRMG----------------------CRILSQEILPEVDLYVTLEPC------TMCAA 88 A+ + + +E+ V LYVTLEPC CA Sbjct: 56 WAMLAAYEALEGREAAVDSADADAVYDFLQTVPEELFRGVSLYVTLEPCAHHGRTPSCAW 115 Query: 89 AISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A+S + R+ ++P G G + H E+ G+ E+ +R++++ F Sbjct: 116 ALSRFPLHRVVVATADPIPGH-GGGLEILAD----HGIEVATGVCEEEARELLEPF 166 >gi|226304955|ref|YP_002764913.1| deaminase [Rhodococcus erythropolis PR4] gi|226184070|dbj|BAH32174.1| putative deaminase [Rhodococcus erythropolis PR4] Length = 121 Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 1/105 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 +S AL+ A+ E+P+GAV +++++ RA + R L HA++ AI L Sbjct: 8 LSLALDVAREGMELGEMPIGAVVFDDDRVLGRAYTQERALGRRVVHADLQAILQADEALG 67 Query: 68 QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 + L V LEPC MC A + R+++ G Sbjct: 68 FTRASGELTLAVNLEPCLMCMGAAITLGVSRVWFAEYATGTGPAG 112 >gi|325478589|gb|EGC81701.1| riboflavin biosynthesis protein RibD [Anaerococcus prevotii ACS-065-V-Col13] Length = 357 Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 58/157 (36%), Gaps = 32/157 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M N+ M + A ++ P VGAV + KII+R +++ HAEI Sbjct: 1 MNYDNL-MRECFDLALKG--SGKVLTNPMVGAVLYKDGKIIARGYHKSYYDD----HAEI 53 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASN--PKGG 108 E L V LEPC C + +++R+ ++ PK Sbjct: 54 DCFNNL-----NESAEGATLVVNLEPCSHFGKHPPCVDEVIRRKVKRVVISNTDTNPKVD 108 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 GI + E+ G+ E+ ++ + FF Sbjct: 109 GISKLKEA--------GIEVITGVLEEEGEKLNEKFF 137 >gi|239932948|ref|ZP_04689901.1| hypothetical protein SghaA1_32303 [Streptomyces ghanaensis ATCC 14672] gi|291441299|ref|ZP_06580689.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291344194|gb|EFE71150.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 161 Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 56/151 (37%), Gaps = 11/151 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + +E A A + P G+V V + +++ NR D T H E R L Sbjct: 11 LRRCVELATEALESGDEPFGSVLVGGDGTVLAEDHNRV-ASGDHTRHPEFELARWSAAHL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA-TCHHS 125 + + +Y + E C MCAAA + + R+ Y AS+ + + Sbjct: 70 TPDERAAATVYTSGEHCPMCAAAHAWVGLGRIVYVASSEQLASWLSELGVPAPPVRTLPV 129 Query: 126 PEIYPGI--------SEQRSRQIIQDFFKER 148 E+ PG+ ++ + F + R Sbjct: 130 AEVAPGVVVDGPVPELVGEVEELHRRFHRAR 160 >gi|54307992|ref|YP_129012.1| putative pyrimidine deaminase/pyrimidine reductase [Photobacterium profundum SS9] gi|46912418|emb|CAG19210.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium profundum SS9] Length = 371 Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 53/152 (34%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M A+E A+ P VG + I+ + + HAE+ A+R Sbjct: 6 DHSMMLRAIELAKRGRFTTAPNPNVGCIIAQGATIVGEGFH--YQAGQP--HAEVFALRA 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ +P G + Sbjct: 62 AG-----EQAKGATAYVTLEPCSHFGRTPPCAQALINANVSRVVCAMVDPNPKVGGRGIE 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 +A E+ G+ ++ + F K Sbjct: 117 MLKIAG----IEVQTGLLAADAQALNFGFIKR 144 >gi|222151702|ref|YP_002560858.1| hypothetical protein MCCL_1455 [Macrococcus caseolyticus JCSC5402] gi|222120827|dbj|BAH18162.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 341 Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 48/127 (37%), Gaps = 27/127 (21%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VG V V +++I+ + AHAE+ AI M LY TLEPC Sbjct: 23 VGCVIVKDDRIVGIGAHLTEGE----AHAEVNAIHMAGSHAQ-----GATLYCTLEPCSH 73 Query: 84 ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C I A I ++ Y AS+ + +G ++ + + + R Sbjct: 74 HGKTPPCTEKIVAAGISKVVYAASDVT---LSSGVKYMRSESIE--------VEKVECRA 122 Query: 140 IIQDFFK 146 I DF+ Sbjct: 123 I-DDFYA 128 >gi|86145701|ref|ZP_01064030.1| putative riboflavin deaminase [Vibrio sp. MED222] gi|85836400|gb|EAQ54529.1| putative riboflavin deaminase [Vibrio sp. MED222] Length = 145 Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 17/141 (12%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M ALE ++ A + PVG V V N+K++S + HAE+ A+ Sbjct: 2 NQQYMLQALEASRQALPDCQPNPPVGCVLVKNDKVVSVGYTQKVGGN----HAEVEAL-N 56 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 G + + V YVTLEPC CA+ + A ++ + +P G Sbjct: 57 GYDCETDGEMEGVTAYVTLEPCSFVGRTPACASTLVKAGVKHVVVAMLDPDPRNNGRGVA 116 Query: 116 FYTLATCHHSPEIYPGISEQR 136 H ++ G+ +++ Sbjct: 117 ILES----HGVKVDVGLCQEQ 133 >gi|319786233|ref|YP_004145708.1| riboflavin biosynthesis protein RibD [Pseudoxanthomonas suwonensis 11-1] gi|317464745|gb|ADV26477.1| riboflavin biosynthesis protein RibD [Pseudoxanthomonas suwonensis 11-1] Length = 365 Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 52/149 (34%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + M+ AL+ A R VG V + ++ + HAE+ A+R Sbjct: 9 DHACMARALQLAARGLYTARPNPVVGCVVAKDGAVVGEGWHPRAGE----PHAEVFALRE 64 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ +P G Sbjct: 65 AG-----ERARGATAYVTLEPCAHHGRTPPCAEALVQAGVARVVAAMRDPFPRVDGAGFA 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + G+ E ++R + + F Sbjct: 120 RLQAAG----IAVAAGLMEGQARDLNRGF 144 >gi|260575298|ref|ZP_05843298.1| riboflavin biosynthesis protein RibD [Rhodobacter sp. SW2] gi|259022558|gb|EEW25854.1| riboflavin biosynthesis protein RibD [Rhodobacter sp. SW2] Length = 357 Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 49/148 (33%), Gaps = 21/148 (14%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL A R VG V V +++ R + HAE++A+ + Sbjct: 1 MAHALALAARGLGRAWPNPAVGCVIVAGGRVVGRGHTQPGGR----PHAEVMALHQAGAL 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC CA A+ A + R+ ++P G Sbjct: 57 A-----RGATAYVTLEPCAHHGHTPPCAEALIAAGVARVVTALTDPDPRVSGKGHALLRA 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ + F K Sbjct: 112 AG----IAVTEGVLPAEATAANAGFLKR 135 >gi|237880781|gb|ACR33039.1| cytosine/adenine deaminase [Actinoplanes garbadinensis] Length = 161 Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 2/103 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + ++ A+ A + P G+V V + K++ NR R D T H E R Sbjct: 5 ETDLAHLRRCVDLAREALDDGDEPFGSVLVSADGKVLFEDRNRVR-HGDATQHPEFAISR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L+ +Y + E C MC+A+ R+ R+ Y AS Sbjct: 64 WAAEHLTPRERASATVYTSGEHCPMCSASHGWVRLGRIVYAAS 106 >gi|260551098|ref|ZP_05825302.1| riboflavin biosynthesis protein RibD [Acinetobacter sp. RUH2624] gi|260405865|gb|EEW99353.1| riboflavin biosynthesis protein RibD [Acinetobacter sp. RUH2624] Length = 113 Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 17/105 (16%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +K+ +M A+E A+ P VG V V +N++I + K HAE+ A Sbjct: 4 LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQVIGEGFH----PKAGQPHAEVFA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRR 97 +R YVTLEPC CA A+ A++++ Sbjct: 60 LRQAGEQAQ-----GATAYVTLEPCAHYGRTPPCAEALVKAQVKK 99 >gi|315179335|gb|ADT86249.1| riboflavin biosynthesis protein RibD [Vibrio furnissii NCTC 11218] Length = 369 Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 49/152 (32%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 MS A++ AQ P VG V I+ + HAE+ A+RM Sbjct: 8 DYQMMSRAIKLAQRGRFTTAPNPNVGCVITQGESIVGEGFHFRAGE----PHAEVHALRM 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA + A + R+ +P G Sbjct: 64 AGEQS-----VGATAYVTLEPCSHYGRTPPCAEGLIKAGVARVICAMQDPNPQVAGRGID 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E + + F K Sbjct: 119 MLREAG----IEVQVGLLEADALALNPAFIKR 146 >gi|167538365|ref|XP_001750847.1| hypothetical protein [Monosiga brevicollis MX1] gi|163770668|gb|EDQ84351.1| predicted protein [Monosiga brevicollis MX1] Length = 203 Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 6/107 (5%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 M+ A++ ++ L P GAV +++II+ NR AHAE +A Sbjct: 43 DDESKMALAIDLSRRNVLHKTGGPFGAVVFGPDHRIIAVGVNRVVPQVSSLAHAENMAYM 102 Query: 61 MGCRILSQEILPE----VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + + L L E V L + +PC C A A I RL GA Sbjct: 103 LAQQHLQTYRLNEKNAPVTLVSSAQPCCQCYGATIWAGIDRLVIGAR 149 >gi|91763228|ref|ZP_01265192.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus Pelagibacter ubique HTCC1002] gi|91717641|gb|EAS84292.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus Pelagibacter ubique HTCC1002] Length = 366 Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 48/110 (43%), Gaps = 17/110 (15%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 K +FM AL A+ L P VG V V NNKI+S + T HAE AI+ Sbjct: 11 KDKIFMELALNLAKARHGLTGINPSVGCVIVKNNKILSIG----QTGFKGTPHAEFNAIK 66 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASN 104 S E + +YVTLEPC C I +I+ + YG + Sbjct: 67 N-----SHENIEGSKMYVTLEPCSHYGKTPPCTNIIIKNKIKEVVYGVED 111 >gi|157369315|ref|YP_001477304.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Serratia proteamaculans 568] gi|157321079|gb|ABV40176.1| riboflavin biosynthesis protein RibD [Serratia proteamaculans 568] Length = 369 Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 54/157 (34%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M+ A E A+ P VG V V + +I+ + HAE+ A Sbjct: 1 MHNDEFYMARAFELARLGRFTTAPNPNVGCVIVRDGEIVGEGYHLRAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM YVTLEPC CA A+ A + R+ +P Sbjct: 57 LRMAGEKA-----RGATAYVTLEPCSHHGRTPPCADALVAAGVARVVAAMQDPNPEVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A ++ G+ + + F K R Sbjct: 112 GLYKLQQAGL----DVRHGLMLAEAESVNLGFLKRMR 144 >gi|89070868|ref|ZP_01158107.1| riboflavin biosynthesis protein RibD [Oceanicola granulosus HTCC2516] gi|89043556|gb|EAR49766.1| riboflavin biosynthesis protein RibD [Oceanicola granulosus HTCC2516] Length = 362 Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 55/151 (36%), Gaps = 23/151 (15%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + FM+ AL + R VG V V + +I++RA R HAE+ A+ Sbjct: 3 EADGRFMALALGLGRQGLGRTWPNPSVGCVLVRDGRILARA----RTADGGRPHAEMRAL 58 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 YVTLEPC CA+ ++ A + R+ G ++ G Sbjct: 59 AAA-------DPRGATAYVTLEPCAHVGETPACASELARAGVARVVIGCADADARTAGQG 111 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + G+ E +R + F Sbjct: 112 VAILRAAG----VAVTTGVREAEARALHAGF 138 >gi|299115418|emb|CBN75583.1| riboflavin biosynthesis protein [Ectocarpus siliculosus] Length = 541 Score = 88.8 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 49/153 (32%), Gaps = 22/153 (14%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57 ++ M ALE A R VG V + ++ + HAE+ Sbjct: 67 LEVDGAHMRRALELAAKGLGHTRPNPAVGCVILDKEGSVVGEGFHPRAGE----PHAEVW 122 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AIR E YV+LEPC C A+ + R+ G +P Sbjct: 123 AIRQAG-----ERARGGTAYVSLEPCNHFGRTPPCTTALLECGVARVVAGMVDPDPRTAG 177 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 +G + A ++ G+ + F Sbjct: 178 SGLRRLADAG----IDVSVGVEGAACHALNSAF 206 >gi|116334232|ref|YP_795759.1| pyrimidine reductase, riboflavin biosynthesis [Lactobacillus brevis ATCC 367] gi|116099579|gb|ABJ64728.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Lactobacillus brevis ATCC 367] Length = 356 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 52/151 (34%), Gaps = 35/151 (23%) Query: 7 FMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+ A+ + P VGAV V + KI+S + HAEI A+ + Sbjct: 6 FMQQAVIAARRGSGHTWTNPLVGAVFVKHGKILSVGYHHRYGQ----RHAEIDAL---AQ 58 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + + LYVTLEPC CA + + R+ G +P G Sbjct: 59 LQRPQQAQGATLYVTLEPCSHFGKTPPCADRLIEVGVGRVVIGQRDPNPLVAGRGISKLR 118 Query: 119 LATC--------------------HHSPEIY 129 A HH P++ Sbjct: 119 AAGIPVSVLDSTTALNPAYNFYYQHHRPQVT 149 >gi|302036973|ref|YP_003797295.1| bifunctional daminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus Nitrospira defluvii] gi|300605037|emb|CBK41370.1| fused Diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus Nitrospira defluvii] Length = 373 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 56/154 (36%), Gaps = 26/154 (16%) Query: 2 KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 + +M+ AL A R P VGA+ V +I+ + +R HAE++ Sbjct: 3 SRDREYMTLALRLAAKG--RGSTSPNPMVGALVVTRGRIVGQGSHRKAGG----PHAEVI 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+ LYVTLEPC C + + +RR+ +P Sbjct: 57 ALSQAG-----SRAKGGTLYVTLEPCSHLKKRTPPCVPLVMASGVRRVVVAMVDPNPQVK 111 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 NG L ++ G E + Q+ Q + Sbjct: 112 GNG--VAQLTRAGIRVDV--GCCEAEATQLNQAY 141 >gi|260907588|ref|ZP_05915910.1| cytidine/deoxycytidylate deaminase family protein [Brevibacterium linens BL2] Length = 264 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 56/154 (36%), Gaps = 23/154 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRE-LKDVTAHAEILAI 59 + ++ A +A R P ++ V + +I+ AGN + D T HAE+ A Sbjct: 102 NTDLALLRQTIDLATDARNRGRHPFASMVVSADGTVIASAGNNSMPPEGDPTQHAELSAA 161 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 R++ E LP LY + EPC MC AI I R+ Y S + + Sbjct: 162 AEAARMVPAEELPTATLYTSAEPCVMCTGAIYWTGIGRIVYALSESR------LLELTGD 215 Query: 120 ATCHH---------------SPEIYPGISEQRSR 138 + + ++ + E + Sbjct: 216 DPENPTFDLPCREVIARGQRNIDVLGPLLEDEAA 249 >gi|311103895|ref|YP_003976748.1| riboflavin biosynthesis protein RibD [Achromobacter xylosoxidans A8] gi|310758584|gb|ADP14033.1| riboflavin biosynthesis protein RibD [Achromobacter xylosoxidans A8] Length = 383 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 52/154 (33%), Gaps = 18/154 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M AL AQ P VG V V + +++ + HAE+ A+ Sbjct: 7 NDDIFWMRRALALAQTVMYSTAPNPRVGCVIVRDGRVLGEGATQPPGG----PHAEVCAL 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R E + LYVTLEPC C A+ AR R+ +P G Sbjct: 63 RDVQAR--GESVEGATLYVTLEPCSHFGRTPPCVDAVLAARPARVVVAIGDPNPLVNGQG 120 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 LA E+ G+ + + F Sbjct: 121 LARLRLAG----IEVTTGVCGAEALAVNAGFISR 150 >gi|119502840|ref|ZP_01624925.1| Riboflavin biosynthesis protein RibD [marine gamma proteobacterium HTCC2080] gi|119461186|gb|EAW42276.1| Riboflavin biosynthesis protein RibD [marine gamma proteobacterium HTCC2080] Length = 359 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 53/145 (36%), Gaps = 22/145 (15%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL EA+ P VG V V +NKI+ + + AHAEI+A+ C Sbjct: 1 MEQALAEARKGRFWATPNPHVGCVIVSDNKILGKGFTQPVGG----AHAEIMAL-GACAS 55 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC C A+ A I R+ +P G Sbjct: 56 PQ-----GATAYVTLEPCAHQGRTGPCVEALISAGIGRVVGALEDPNPSVSGKGYDRLRA 110 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A + G+ + +R + F Sbjct: 111 AG----IAVTQGVYSEAARVELAGF 131 >gi|90578371|ref|ZP_01234182.1| putative riboflavin deaminase [Vibrio angustum S14] gi|90441457|gb|EAS66637.1| putative riboflavin deaminase [Vibrio angustum S14] Length = 146 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 50/142 (35%), Gaps = 21/142 (14%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM AL + + A R PVG V V +I+S + HAE +A+ Sbjct: 6 QEQAFMIRALLLSHQSLPACRPNPPVGCVLVKEGEIVSEGFTQPPGQH----HAEAMAL- 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 +V YVTLEPC CA + I+++ +P G Sbjct: 61 ----ANYDGSFTDVTAYVTLEPCSFVGRTPSCAHTLVELGIKKVVVATLDPDSRNSGKGI 116 Query: 115 QFYTLATCHHSPEIYPGISEQR 136 A E+ G+ E Sbjct: 117 AVLKEAG----IEVEVGLCENE 134 >gi|227499806|ref|ZP_03929901.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Anaerococcus tetradius ATCC 35098] gi|227218110|gb|EEI83378.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Anaerococcus tetradius ATCC 35098] Length = 357 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 61/157 (38%), Gaps = 32/157 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M N+ M A+ R ++ P VGA+ + ++I R +++ HAEI Sbjct: 1 MNYDNL-MRECFSLARKG--RGKVLTNPMVGAIVYKDGEVIGRGYHKSFYDD----HAEI 53 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGA--SNPKGG 108 C + L V LEPC C + +I+R+ +NPK Sbjct: 54 D-----CFKNLKGSAEGATLIVNLEPCSHFGKHPPCVDEVIRRKIKRVVISNIDTNPKVD 108 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 GI L C E+ G+ E+ +++ + FF Sbjct: 109 GIS------KLKAC--GIEVISGVLEEEGKKLNEKFF 137 >gi|170721237|ref|YP_001748925.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida W619] gi|169759240|gb|ACA72556.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida W619] Length = 169 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 11/149 (7%) Query: 9 SCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRE-LKDVTAHAEILAIRMGCRIL 66 ++ A+ + R P A+ ++I+ AGN + D T HAE++A + + L Sbjct: 21 RQSMRLAEQSKARGRHPFAAIVADAEGRVIASAGNNSMPPEGDPTQHAELVAAALAAKAL 80 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE---------NGTQFY 117 E L LY + EPC MCA A+ I R+ Y S G+ + Sbjct: 81 PPEALANCTLYTSAEPCCMCAGAVYWTGIGRVVYALSEHTLLGLTGDHPENPTFSLPCRE 140 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A ++ + E + + F+K Sbjct: 141 VFARGQRDVIVHGPLLEDEAAAAHKGFWK 169 >gi|254796854|ref|YP_003081691.1| riboflavin biosynthesis protein RibD [Neorickettsia risticii str. Illinois] gi|254590091|gb|ACT69453.1| riboflavin biosynthesis protein RibD [Neorickettsia risticii str. Illinois] Length = 359 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 51/138 (36%), Gaps = 21/138 (15%) Query: 8 MSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ + + VG + V +++++ + + + HAE +A+++ Sbjct: 1 MEAAVNASLFGQGFTADNPSVGCIIVKDDEVVGKG----VTGINGSPHAEAVALKVAGIK 56 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 DLY TLEPC C I + I+ ++ G +P G Q Sbjct: 57 A-----RGADLYTTLEPCAHHGRTAPCTDLIIGSGIKNVFIGTRDPDTRVNGKGIQKLRE 111 Query: 120 ATCHHSPEIYPGISEQRS 137 + + GI ++ Sbjct: 112 SG----IVVTTGILKREC 125 >gi|320449997|ref|YP_004202093.1| riboflavin biosynthesis protein RibD [Thermus scotoductus SA-01] gi|320150166|gb|ADW21544.1| riboflavin biosynthesis protein RibD [Thermus scotoductus SA-01] Length = 383 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 57/151 (37%), Gaps = 24/151 (15%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 F+ AL+ A+ A P VGAV V +++ + AHAE+ A+R Sbjct: 11 DERFLRRALQLAERARGHT-HPNPLVGAVLVREGRVVGEGYHPRAGE----AHAEVYALR 65 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E LYV+LEPC C+ A+ A + R+ A +P Sbjct: 66 QAG-----EEAQGATLYVSLEPCNHFGRTPPCSLALLQAGVARVVAAARDPNPLAQGGLE 120 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + E+ G+ E ++ + FF Sbjct: 121 RLRAG-----GVEVEAGLLEAEAQGQNEVFF 146 >gi|269839638|ref|YP_003324330.1| riboflavin biosynthesis protein RibD [Thermobaculum terrenum ATCC BAA-798] gi|269791368|gb|ACZ43508.1| riboflavin biosynthesis protein RibD [Thermobaculum terrenum ATCC BAA-798] Length = 364 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 42/150 (28%), Positives = 63/150 (42%), Gaps = 21/150 (14%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M ALE A++A R VGAV V + +I + + HAE++A+ Sbjct: 1 MRRALELAESALGRTWPNPAVGAVVVRDGLVIGKGATQPPGG----PHAEVVAL-----A 51 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + E LYVTLEPC C AI A +R ++ +P G Sbjct: 52 EAGEAARGAILYVTLEPCSHWGRTPPCTEAIIRAGVREVHAATLDPNPKVHGRGVAQLRE 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E++ G+ E+ + +I + FFK R Sbjct: 112 AG----IEVHLGLCEREATRINEGFFKRVR 137 >gi|172058721|ref|YP_001815181.1| riboflavin biosynthesis protein RibD [Exiguobacterium sibiricum 255-15] gi|171991242|gb|ACB62164.1| riboflavin biosynthesis protein RibD [Exiguobacterium sibiricum 255-15] Length = 348 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 52/149 (34%), Gaps = 21/149 (14%) Query: 8 MSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A++ A+ VG V + K+ +R HAE+ A+ M Sbjct: 5 MHQAMQLARMLDGQTSPNPSVGCVITKHGKVFGFGAHRFAGG----PHAEVEALNMAGEA 60 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 DLYVTLEPC C AI A I+R++ + G + Sbjct: 61 A-----RGADLYVTLEPCNHHGKTPPCTEAILAAGIKRVFVATEDRHAIVAGQGIKRLRD 115 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148 A + G+ E + + F++ Sbjct: 116 AGL----TVEVGLLEDEAVRFYTPFWQSL 140 >gi|254511482|ref|ZP_05123549.1| riboflavin biosynthesis protein RibD [Rhodobacteraceae bacterium KLH11] gi|221535193|gb|EEE38181.1| riboflavin biosynthesis protein RibD [Rhodobacteraceae bacterium KLH11] Length = 358 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 47/146 (32%), Gaps = 21/146 (14%) Query: 8 MSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL + VG V V + +I+ R + HAE A+ Sbjct: 1 MALALSLGRRGQGNCWPNPAVGCVIVRDGRIVGRGWTQPGGR----PHAEPQALAQAGEA 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YV+LEPC CA + A + R+ + G Sbjct: 57 A-----KGATAYVSLEPCSHYGKTPPCAQVLIGAGVARVVSAIEDSDPRVAGQGFDMLRA 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ +++ Q FF Sbjct: 112 AG----IEVTSGVLAEQAAQDHAGFF 133 >gi|114331695|ref|YP_747917.1| CMP/dCMP deaminase, zinc-binding [Nitrosomonas eutropha C91] gi|114308709|gb|ABI59952.1| CMP/dCMP deaminase, zinc-binding protein [Nitrosomonas eutropha C91] Length = 165 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 2/103 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 + F+ + A+ A + P G+V V ++ A N+ D T H E R Sbjct: 5 EADLHFLRRCIALAEEALEAGDEPFGSVLVSGEGVVLLEARNQV-SSGDQTRHPEFEISR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 ++ E + +Y + E C MC+AA + R+ Y +S Sbjct: 64 WAATHMTPEERNKATVYTSSEHCPMCSAAHGWVGLGRIVYASS 106 >gi|157374412|ref|YP_001473012.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Shewanella sediminis HAW-EB3] gi|157316786|gb|ABV35884.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Shewanella sediminis HAW-EB3] Length = 374 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 54/153 (35%), Gaps = 21/153 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + MS A++ A+ P VG+V ++I + HAE+ A+ Sbjct: 5 EDIEMMSRAIKLARKGLYTTRPNPCVGSVVTKAGQVIGEGFHIRAGG----PHAEVYALA 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + YVTLEPC CA A+ A + R+ +P G Sbjct: 61 MA-----SDNAKGATAYVTLEPCSHHGRTPPCAEALIKAGVARVVVAIEDPNPQVSGRGI 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + T A ++ G+ + I F K Sbjct: 116 KMLTDAG----IQVDVGLLNVEAGDINPGFMKR 144 >gi|327439885|dbj|BAK16250.1| cytosine/adenosine deaminase [Solibacillus silvestris StLB046] Length = 160 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 12/156 (7%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +E A+ A + + P G+V V + +++ N D T H E R Sbjct: 6 DLKHLQRCVELAKIALEKGDEPFGSVLVSADGEVLFEDHNHV-AGGDHTQHPEFAIARWA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP-------KGGGIENGTQ 115 + E + +Y + E C MCAAA + R+ Y +S+ + G + + Sbjct: 65 ANNMKPEERIKATVYTSGEHCPMCAAAHGWVGLGRIVYASSSKQLVEWLAELGQAPSRVR 124 Query: 116 FYTLATCHHSPEIYPGI--SEQRSRQIIQDFFKERR 149 ++ + + + + Q+ + F E+R Sbjct: 125 NLSIQEVINDISVDGPVPELAEEVHQLHRQF-HEKR 159 >gi|116072381|ref|ZP_01469648.1| Riboflavin biosynthesis protein RibD [Synechococcus sp. BL107] gi|116064903|gb|EAU70662.1| Riboflavin biosynthesis protein RibD [Synechococcus sp. BL107] Length = 354 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 53/154 (34%), Gaps = 22/154 (14%) Query: 5 NVFMSCALEEAQNAALRNEI-P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +M AL A A P VGAV + + +++ + HAE+ A+ Sbjct: 3 DAWMRRALALAGLADGHTSPNPLVGAVVLDRHGRLVGEGFHARAGE----PHAEVGALAQ 58 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + L VTLEPC C+ A+ A I R+ +P G Sbjct: 59 AG-----DRAKGGTLVVTLEPCCHHGRTPPCSEAVLRAGIARVVIALEDPDPRVDGGGMA 113 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + + + F R Sbjct: 114 QLRAAGL----DVISGVLQAEAAFQNRAFLHRVR 143 >gi|238006290|gb|ACR34180.1| unknown [Zea mays] Length = 130 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 21/113 (18%) Query: 56 ILAIRMGCRILSQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 + AI + R E DLYVT EPC MCA A+S+ IR +Y+G +N K Sbjct: 1 MEAIDVLLREWQSMGLDQPQVAEKFAGCDLYVTCEPCIMCATALSIIGIREVYFGCANDK 60 Query: 107 GGGIENGTQFYT------------LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 GG + + A+ + GI + + + + F+++ Sbjct: 61 FGGCGSIMSLHNGAASSSDELSGSQASTPKGFKCTGGIMAEEAVALFRCFYEQ 113 >gi|229589688|ref|YP_002871807.1| putative riboflavin biosynthesis deaminase [Pseudomonas fluorescens SBW25] gi|229361554|emb|CAY48431.1| putative riboflavin biosynthesis deaminase [Pseudomonas fluorescens SBW25] Length = 156 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 56/146 (38%), Gaps = 21/146 (14%) Query: 7 FMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL + + A PVG V V +N +IS+ + HAE +A+ Sbjct: 10 FMQLALAQGRLALPECLPNPPVGCVLVQDNMVISQGYTQAPGFH----HAEAMALSRLTN 65 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 V +VTLEPC CA A+ + + ++ G +P G + Sbjct: 66 EC-----SAVTAFVTLEPCSFHGRTPSCALALINSGVETVFVGLLDPDPRNSGAGIRMLR 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144 A + G+ + + + + DF Sbjct: 121 DAG----ITVIVGLLAEETAEDLADF 142 >gi|116617932|ref|YP_818303.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096779|gb|ABJ61930.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 344 Score = 88.0 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 53/129 (41%), Gaps = 16/129 (12%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M A +EA A E P VGAV V + ++I+ + AHAEI A Sbjct: 2 NDLTWMKLAADEAIRAMPYQTFENPRVGAVIVKDGQVITTGYHEKFGE----AHAEINAF 57 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 R+ ++ LYVTLEPC+ CA I ++R+ G+ +P G Sbjct: 58 N---RVKNKTEFLGATLYVTLEPCSTQGKVGSCAVQIQNWGLKRVVVGSIDPNPSTNGKG 114 Query: 114 TQFYTLATC 122 + A Sbjct: 115 IKMLRSAGI 123 >gi|86357148|ref|YP_469040.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidinedea minase protein [Rhizobium etli CFN 42] gi|86281250|gb|ABC90313.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidinedea minase protein [Rhizobium etli CFN 42] Length = 435 Score = 88.0 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 45/142 (31%), Gaps = 21/142 (14%) Query: 3 KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM+ A+ ++ VG V V + ++ +A HAE A+ Sbjct: 6 DDEGFMAAAIRLSRRHLGRTATNPSVGCVIVKDGVVVGQA----VTALGGRPHAEPQALA 61 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ + R+ ++P G Sbjct: 62 EAGDLA-----RGATAYVTLEPCSHHGKTPPCAEALIACGVARVVISVTDPDPRVSGRGI 116 Query: 115 QFYTLATCHHSPEIYPGISEQR 136 A + G+ E Sbjct: 117 SMLREAG----IAVDAGVLEAE 134 >gi|260767835|ref|ZP_05876770.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio furnissii CIP 102972] gi|260617344|gb|EEX42528.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio furnissii CIP 102972] Length = 369 Score = 88.0 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 49/152 (32%), Gaps = 21/152 (13%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 MS A++ AQ P VG V I+ + HAE+ A+RM Sbjct: 8 DYQMMSRAIKLAQRGRFTTAPNPNVGCVITQGESIVGEGFHFRAGE----PHAEVHALRM 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA + A + R+ +P G Sbjct: 64 AGEQS-----VGATAYVTLEPCSHYGRTPPCAEGLIKAGVARVICAMQDPNPQVAGRGID 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E + + F K Sbjct: 119 MLREAG----IEVQVGLLEADALALNPAFIKR 146 >gi|323487730|ref|ZP_08092988.1| hypothetical protein GPDM_00245 [Planococcus donghaensis MPA1U2] gi|323398464|gb|EGA91252.1| hypothetical protein GPDM_00245 [Planococcus donghaensis MPA1U2] Length = 162 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 58/157 (36%), Gaps = 11/157 (7%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 + + + +E A+ A + + P G+V V ++ N D T H E R Sbjct: 4 ETDLMHLKRCVELAETALEKGDEPFGSVLVSETGDVLYEDHNHV-AGGDHTQHPEFAIAR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP-------KGGGIENG 113 LS E + +Y + E C MCAAA + R+ Y +S+ G + Sbjct: 63 WAATNLSLEERSKATVYTSGEHCPMCAAAHGWVGLGRIVYASSSKQLAEWLSDMGAAPSR 122 Query: 114 TQFYTLATCHHSPEIYPGI--SEQRSRQIIQDFFKER 148 + + + + +R ++ Q FK + Sbjct: 123 VRNLAIREVIKDTIVEGPVPELAERMYELHQRSFKAK 159 >gi|259502164|ref|ZP_05745066.1| ubiquinol-cytochrome c reductase [Lactobacillus antri DSM 16041] gi|259169782|gb|EEW54277.1| ubiquinol-cytochrome c reductase [Lactobacillus antri DSM 16041] Length = 352 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 50/133 (37%), Gaps = 21/133 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VGAV V N +++ + +HAE R L+ LYVTLEPC Sbjct: 27 VGAVVVKNGHVLATGHTQPYGG----SHAE----RDALSRLAPGQAAGATLYVTLEPCNH 78 Query: 84 ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C I + IRR+ +P G H E+ G+ Q++ Q Sbjct: 79 YGKQPPCTQLIINSGIRRVVVAQLDPHALVTGKGVANLRQ----HGIEVVTGVGAQQAAQ 134 Query: 140 IIQ--DFF-KERR 149 + DFF + R Sbjct: 135 VNPHYDFFYRHHR 147 >gi|119384080|ref|YP_915136.1| riboflavin biosynthesis protein RibD [Paracoccus denitrificans PD1222] gi|119373847|gb|ABL69440.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Paracoccus denitrificans PD1222] Length = 219 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 39/152 (25%), Positives = 51/152 (33%), Gaps = 25/152 (16%) Query: 8 MSCALEEAQNAALRNEI----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M AL A+ +R + PVG V V + II+ HAE LA+ Sbjct: 1 MGRALALARR--MRGHVWPNPPVGCVIVKDGTIIAEG----ETQPGGRPHAERLALNRAG 54 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 LYVTLEPC CA AI A + R+ +P G Sbjct: 55 AAARGA-----TLYVTLEPCCHWGRTPPCADAIIAAGVTRVVAAMQDPDPRVDGGGFARL 109 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G + I+ F R Sbjct: 110 RAAG----IEVTVGEGATDAAAIMSGFLHRTR 137 >gi|315497946|ref|YP_004086750.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Asticcacaulis excentricus CB 48] gi|315415958|gb|ADU12599.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Asticcacaulis excentricus CB 48] Length = 147 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 24/152 (15%) Query: 3 KGNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-HAEILAI 59 + M+ A+ A Q PVG V V + +I+ A D HAE Sbjct: 2 SDSRHMARAIAMATAQLGRTVPNPPVGCVIVKDGVVIAEA-----ATGDGGRPHAE---- 52 Query: 60 RMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 YVTLEPC C+ + A + R+ + +P Sbjct: 53 -EAALAQLDHRAEGATAYVTLEPCGARSHGGLSCSQRLVEAGVSRVVFACHDPSPFASHL 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A ++ G+ + +I DF Sbjct: 112 GIICMSEAGL----KVETGLMADEAAALIADF 139 >gi|163868466|ref|YP_001609675.1| riboflavin biosynthesis protein ribD [Bartonella tribocorum CIP 105476] gi|161018122|emb|CAK01680.1| Riboflavin biosynthesis protein ribD [Bartonella tribocorum CIP 105476] Length = 375 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 53/148 (35%), Gaps = 26/148 (17%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNK-----IISRAGNRNRELKDVTAHAE 55 + FM+ A+ A+ L E P VGA+ V N+ I+ HAE Sbjct: 6 QDERFMAAAIRLAERHVGLTGENPSVGALIVQNDDCAGPFIVGYG----VTAFHGRPHAE 61 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGG 109 + A+RM + YVTLEPC C A+ + I R+ ++ Sbjct: 62 VQALRMAGPLAQ-----GATAYVTLEPCAHYGKTSPCVNALIDSGISRIVVALTDCDKRV 116 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRS 137 G A ++ GI + + Sbjct: 117 DGRGLALLREAG----IKVVEGILAEEA 140 >gi|227548982|ref|ZP_03979031.1| guanine deaminase [Corynebacterium lipophiloflavum DSM 44291] gi|227078933|gb|EEI16896.1| guanine deaminase [Corynebacterium lipophiloflavum DSM 44291] Length = 150 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 40/91 (43%), Gaps = 1/91 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 + A+E A +A P G V V + N D +AHAEI AIR R Sbjct: 4 LQRAVEIAVESARTGGGPFGCVVVTERGVY-EGHNEVVSRCDPSAHAEIQAIRAAARAQR 62 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 L LY + +PC MC AAI ARI + Sbjct: 63 SHELSGAVLYASGQPCPMCFAAIRWARIDEV 93 >gi|241761018|ref|ZP_04759107.1| riboflavin biosynthesis protein RibD [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374637|gb|EER64098.1| riboflavin biosynthesis protein RibD [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 323 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 58/157 (36%), Gaps = 24/157 (15%) Query: 1 MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57 ++ +M A+ + VG + V +N+II R ++ HAE + Sbjct: 4 LENDIRWMQAAIALGERSKGLTAPSPSVGCIIVNKDNQIIGRGWTQSGGR----PHAEAM 59 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+ + L +YVTLEPC C+ ++ A R+ +P Sbjct: 60 ALSQ------CQSLKGATVYVTLEPCAHKSNRGPTCSDSLVAALPERVVIACRDPDPRTN 113 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G A ++ G+ E+++ Q + FF Sbjct: 114 GQGISKMVAAG----IKVECGLLEKQAAQSMSGFFSR 146 >gi|262196460|ref|YP_003267669.1| riboflavin biosynthesis protein RibD [Haliangium ochraceum DSM 14365] gi|262079807|gb|ACY15776.1| riboflavin biosynthesis protein RibD [Haliangium ochraceum DSM 14365] Length = 367 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 51/153 (33%), Gaps = 25/153 (16%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M+ LE A+ A R VG V V ++I+ +R HAE A+ Sbjct: 1 MARCLELARRAEGRTAPNPMVGCVIVAPSGEVIAEGYHRRAGA----PHAEAEALAQL-- 54 Query: 65 ILSQEILPEVDLYVTLEPC--------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 P +YV LEPC CA A++ A I RL G +P Sbjct: 55 ---DGRAPGCTMYVNLEPCRHRRKRRTVPCAPAVAEAGIARLVVGMGDPIRSHAGGAAWL 111 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + G+ R + + F R Sbjct: 112 ARQ-----GVSVTRGVLRADCRDLNRGFITRAR 139 >gi|218514099|ref|ZP_03510939.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase protein [Rhizobium etli 8C-3] Length = 179 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 47/142 (33%), Gaps = 21/142 (14%) Query: 3 KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM+ A+ ++ VG + V + I+ +A HAE A+ Sbjct: 6 DDEGFMAAAIRLSRQHLGRTATNPSVGCLIVKDGVIVGQA----VTALGGRPHAEPQALA 61 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 ++ YVTLEPC CA A+ + R+ ++P G Sbjct: 62 EAGQLA-----RGATAYVTLEPCSHHGKTPPCAEALIAYGVARVVISVTDPDPRVSGRGI 116 Query: 115 QFYTLATCHHSPEIYPGISEQR 136 A E+ G+ E Sbjct: 117 TMLRDAG----IEVDAGVLEAE 134 >gi|126738756|ref|ZP_01754452.1| riboflavin biosynthesis protein RibD [Roseobacter sp. SK209-2-6] gi|126719937|gb|EBA16644.1| riboflavin biosynthesis protein RibD [Roseobacter sp. SK209-2-6] Length = 370 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 21/152 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M+ AL + P VG V V +I+ R + HAE A+ Sbjct: 8 QTDARYMALALSLGRRGQGKCWPNPAVGCVIVKEGRIVGRGWTQPGGR----PHAEPQAL 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 YVTLEPC CA A+ A + + + G Sbjct: 64 AQAGEAA-----RGATAYVTLEPCSHFGETPPCAQALIDAGVSHVVAAIEDSDPRVSGQG 118 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + +A + G+ + + FF Sbjct: 119 FEMLRMAG----ITVRTGVLAEEAGLDHAGFF 146 >gi|322704161|gb|EFY95759.1| cytidine and deoxycytidylate deaminase [Metarhizium anisopliae ARSEF 23] Length = 469 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 30/56 (53%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 F+ AL+ A+ A NE PVG V V N II++ N ++ T HAE +AI Sbjct: 148 HLRFIEEALDMARLALRTNETPVGCVLVHNGTIIAKGMNATNVTRNGTRHAEFMAI 203 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 47/125 (37%), Gaps = 40/125 (32%) Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL- 119 +S+EI+ E LYVT+EPC MCA+ + I+++Y+GA N K GG + Sbjct: 267 HAGDRVSREIIRECILYVTVEPCVMCASLLRQLGIKKVYFGAVNDKFGGTGGVFSIHANS 326 Query: 120 ---------ATCHHSP------------------------------EIYPGISEQRSRQI 140 A+ H +P EI G + + Sbjct: 327 LPVREDGQTASAHPTPRPSQLPDGSGTLGTSYPPGGGDGGNVEEGYEIEGGWGRDEAVGL 386 Query: 141 IQDFF 145 ++ F+ Sbjct: 387 LRRFY 391 >gi|189425488|ref|YP_001952665.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ] gi|189421747|gb|ACD96145.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ] Length = 194 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 7/99 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A E A+ A + P GAV V + ++ + GN L D HAE + R Sbjct: 48 LRTANEAAKEAMKSDHPPFGAVLVAPDGETVLMKQGN--VSLMD---HAETVIARQAFVK 102 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 + L + L +EPC MCA I A I + YG Sbjct: 103 YDPDYLWKCTLVTNVEPCAMCAGNIYWANIGNVVYGVEE 141 >gi|84387508|ref|ZP_00990526.1| Probable riboflavin biosynthesis protein RibD [Vibrio splendidus 12B01] gi|84377556|gb|EAP94421.1| Probable riboflavin biosynthesis protein RibD [Vibrio splendidus 12B01] Length = 145 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M ALE ++ A + PVG V V N+K++S + HAE+ A+ Sbjct: 2 NQQYMLQALEASRQALPDCQPNPPVGCVLVKNDKVVSVGYTQKVGGN----HAEVEALNS 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 L E + + YVTLEPC CA + A ++ + +P G Sbjct: 58 YDDGLDGE-MEGITAYVTLEPCSFVGRTPACANTLVKAGVKHVVVAMLDPDPRNNGRGVA 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 H ++ G+ + + F Sbjct: 117 ILES----HGVKVDVGL----CQAQVSAF 137 >gi|163747444|ref|ZP_02154796.1| riboflavin biosynthesis protein ribD [Oceanibulbus indolifex HEL-45] gi|161379297|gb|EDQ03714.1| riboflavin biosynthesis protein ribD [Oceanibulbus indolifex HEL-45] Length = 370 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 49/153 (32%), Gaps = 25/153 (16%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 FM+ AL + + + P VG V V +II R HAE A Sbjct: 7 SDARFMALALSLGRRG--QGNVWPNPAVGCVIVQGTRIIGRGW--THPGGRP--HAEPQA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + +YVTLEPC CA A+ A + R+ + Sbjct: 61 LAQAGEAA-----RGATVYVTLEPCSHHGKTPPCAQALINAGVARVVIATQDDDARVNGR 115 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G A ++ G E +R FF Sbjct: 116 GIAMLRAAG----IDVSVGEREAEARADHAGFF 144 >gi|307945264|ref|ZP_07660600.1| riboflavin biosynthesis protein RibD [Roseibium sp. TrichSKD4] gi|307771137|gb|EFO30362.1| riboflavin biosynthesis protein RibD [Roseibium sp. TrichSKD4] Length = 376 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 51/135 (37%), Gaps = 26/135 (19%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI----PVGAVAVLNNK-----IISRAGNRNRELKDVT 51 M+ FM+ A A+ E+ PV A+ V N+ ++ R R K Sbjct: 6 MQTDLRFMAAAERYARRGL--GEVWPNPPVAALIVRENENGQHVVVGRG----RTSKPGG 59 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNP 105 HAE+ A+ M YVTLEPC C+ A+ A I+R+ G +P Sbjct: 60 PHAEVNALTMAGTAA-----KGATCYVTLEPCSHYGRTPPCSVALVEAGIKRVVIGMRDP 114 Query: 106 KGGGIENGTQFYTLA 120 G + A Sbjct: 115 NPRVAGRGIKMLEEA 129 >gi|240850690|ref|YP_002972090.1| riboflavin biosynthesis protein ribD [Bartonella grahamii as4aup] gi|240267813|gb|ACS51401.1| riboflavin biosynthesis protein ribD [Bartonella grahamii as4aup] Length = 375 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 53/148 (35%), Gaps = 26/148 (17%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNK-----IISRAGNRNRELKDVTAHAE 55 + FM+ A+ A+ L E P VG + V N+ I+ + HAE Sbjct: 6 QDERFMAAAIRLAERHVGLTGENPSVGTLIVRNDNSAGAFIVGYG----VTAIHGSPHAE 61 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGG 109 + A+ M + YVTLEPC C A+ + I R+ ++ Sbjct: 62 VQALHMAGSLAQ-----GATAYVTLEPCAHYGKTSPCVNALIDSGISRVVVALTDCDKRV 116 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRS 137 +G A E+ GI + + Sbjct: 117 DGHGIALLRAAG----IEVVEGILAEEA 140 >gi|15834728|ref|NP_296487.1| riboflavin-specific deaminase [Chlamydia muridarum Nigg] gi|7190138|gb|AAF38983.1| riboflavin-specific deaminase [Chlamydia muridarum Nigg] Length = 396 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 23/156 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++ FM A+ + + P VG V V N II R ++ + HAE+ A Sbjct: 31 EQQLFFMREAVALGERGRIFA-PPNPWVGCVIVKNGCIIGRGWHKGI----GSPHAEVCA 85 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + L D+YVTLEPC C + +++ +Y +P + Sbjct: 86 FQ-----DQTSSLVGADVYVTLEPCCHFGRTPPCVDLLIKSKVSSVYIALLDPDPRVCKR 140 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 G A +Y GI + ++ +Q + +R Sbjct: 141 GVARLKEAG----ISVYVGIGHEEAKASLQPYLHQR 172 >gi|154273008|ref|XP_001537356.1| hypothetical protein HCAG_07665 [Ajellomyces capsulatus NAm1] gi|150415868|gb|EDN11212.1| hypothetical protein HCAG_07665 [Ajellomyces capsulatus NAm1] Length = 180 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 48/144 (33%), Gaps = 26/144 (18%) Query: 14 EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73 + A E PVG V V N+++I N + + T HAE LAI R IL Sbjct: 1 MGEEALASGETPVGCVLVHNDEVIGSGMNDTNKSMNGTRHAEFLAIEEVLRKSGMSILGA 60 Query: 74 ----------VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 +Y E + R + K GI G+ Sbjct: 61 QMNVLEGLEVSSIYTPSES-----MSTFYNRQGSV------AKTIGITFGS-----PGID 104 Query: 124 HSPEIYPGISEQRSRQIIQDFFKE 147 + G+ + + +++ F+ + Sbjct: 105 PPYGLTGGLFRKEAIMLLRRFYIQ 128 >gi|167946681|ref|ZP_02533755.1| hypothetical protein Epers_09088 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 112 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFY-TLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AI AR++R+ Y AS+P+ G + + +H E G+ +S ++D Sbjct: 1 MCAGAIVHARVKRVVYAASDPRSGAAGSVFDLLPSDQRFNHRVESEGGLLSGQSANRLRD 60 Query: 144 FFKERR 149 FF+ RR Sbjct: 61 FFRARR 66 >gi|148656622|ref|YP_001276827.1| CMP/dCMP deaminase [Roseiflexus sp. RS-1] gi|148568732|gb|ABQ90877.1| CMP/dCMP deaminase, zinc-binding [Roseiflexus sp. RS-1] Length = 190 Score = 87.7 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 48/150 (32%), Gaps = 11/150 (7%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAI 59 M ++ A+ P A + +++ N L + HAE++A+ Sbjct: 28 DDESRMRLVIDLARENITHGTGGPFAAAVFRAGDGLLVAAGVNSVTRLNNAMLHAEVVAL 87 Query: 60 RMGCRILSQEILPE----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN--G 113 + L +L + EPC MC A + ++RL GA+ I G Sbjct: 88 MFAQARVGSYSLRGAGAPYELVTSCEPCAMCLGATLWSGVQRLVCGATRDDAERIGFDEG 147 Query: 114 TQFYTLATCHHS--PEIYPGISEQRSRQII 141 F + + + ++ Sbjct: 148 PVFAESYAYLERRGIAVVRQVLRTEAADVL 177 >gi|77918274|ref|YP_356089.1| cytosine/adenosine deaminase [Pelobacter carbinolicus DSM 2380] gi|77544357|gb|ABA87919.1| cytosine/adenosine deaminase [Pelobacter carbinolicus DSM 2380] Length = 193 Score = 87.7 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 15/143 (10%) Query: 8 MSCALEEAQNAALRN-EIPVGAVA--VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A+E A++ P GA + + ++I+ N AHAE++A+ + + Sbjct: 32 MRLAIELAEHNIRHGSGGPFGAAVFDLDSGRLIAPGVNLVTSTCCSVAHAELVALMLAQK 91 Query: 65 ILSQEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + L + +L + EPC MC A+ A +++L GA + Sbjct: 92 YVGSFSLADAGRNAELTSSTEPCAMCLGALPWAGLKQLACGARETDARAVGFDE------ 145 Query: 121 TCHHSPEIYPGISEQRSRQIIQD 143 P +PG+ E+R ++++D Sbjct: 146 --GDKPPQWPGLLEKRGIRVLRD 166 >gi|307189599|gb|EFN73960.1| tRNA-specific adenosine deaminase-like protein 3 [Camponotus floridanus] Length = 418 Score = 87.7 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 42/80 (52%) Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + +++ +EPC MCA A+ +R+ ++YGA N G + + +T+ + Sbjct: 331 EKCGPYLCTGYWVFLLMEPCPMCAMALLHSRVAMIFYGAVNQNLGVLGSRAVLHTVPGLN 390 Query: 124 HSPEIYPGISEQRSRQIIQD 143 H ++ GI E+ RQ++++ Sbjct: 391 HRYRVWSGILERECRQMVEE 410 >gi|270284895|ref|ZP_06194289.1| riboflavin-specific deaminase [Chlamydia muridarum Nigg] gi|270288923|ref|ZP_06195225.1| riboflavin-specific deaminase [Chlamydia muridarum Weiss] gi|13633863|sp|Q9PLJ6|RIBD_CHLMU RecName: Full=Riboflavin biosynthesis protein RibD; Includes: RecName: Full=Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase; Includes: RecName: Full=5-amino-6-(5-phosphoribosylamino)uracil reductase; AltName: Full=HTP reductase Length = 371 Score = 87.7 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 23/156 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++ FM A+ + + P VG V V N II R ++ + HAE+ A Sbjct: 6 EQQLFFMREAVALGERGRIFA-PPNPWVGCVIVKNGCIIGRGWHKGI----GSPHAEVCA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + L D+YVTLEPC C + +++ +Y +P + Sbjct: 61 FQ-----DQTSSLVGADVYVTLEPCCHFGRTPPCVDLLIKSKVSSVYIALLDPDPRVCKR 115 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 G A +Y GI + ++ +Q + +R Sbjct: 116 GVARLKEAG----ISVYVGIGHEEAKASLQPYLHQR 147 >gi|91977144|ref|YP_569803.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris BisB5] gi|91683600|gb|ABE39902.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Rhodopseudomonas palustris BisB5] Length = 396 Score = 87.7 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 51/154 (33%), Gaps = 21/154 (13%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL + R VGAV V + I+ R HAE+ A+ Sbjct: 28 DLRFMQLALTLGRRGLGRTATNPAVGAVIVKDGVILGRGW--TEVGGRP--HAEVEAL-- 81 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + E LYVTLEPC CA A+ A I R+ +P G Sbjct: 82 ---ARAGEAARGATLYVTLEPCSHVGRSPPCADAVIAAGISRVVSAIEDPNPLVAGQGHD 138 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + + F+ R Sbjct: 139 KLRAAG----IAVDVGLCAAEAARDHAGHFRRVR 168 >gi|124265967|ref|YP_001019971.1| hypothetical protein Mpe_A0774 [Methylibium petroleiphilum PM1] gi|124258742|gb|ABM93736.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 166 Score = 87.7 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 7/100 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A A +A P GA+ + + +++ GN D HAE +R Sbjct: 18 LHRANAVALSALALGRHPFGALLLAPDHQTVLAEQGN-----IDTVQHAEATLLRTAAAK 72 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 + E L + L T EPC MCA A I R+ YGAS Sbjct: 73 HAPEFLWDCTLVTTFEPCAMCAGTAYWANIGRVVYGASEE 112 >gi|71282342|ref|YP_267480.1| riboflavin biosynthesis protein RibD [Colwellia psychrerythraea 34H] gi|71148082|gb|AAZ28555.1| riboflavin biosynthesis protein RibD [Colwellia psychrerythraea 34H] Length = 389 Score = 87.7 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 57/149 (38%), Gaps = 21/149 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLN----NKIISRAGNRNRELKDVTAHAEILAIRM 61 MS A++ A+ + P VG V V K+I ++ HAE+ A+ Sbjct: 1 MSRAIDLAKKGHFTTSPNPRVGCVLVSYKEGVGKVIGEGYHQKAGQG----HAEVNALAE 56 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 ++ + ++ YVTLEPC CA A+ A + + +P NG Sbjct: 57 A-KVNNPALIKGATAYVTLEPCSHFGRTPPCAKALVDAGVSHVIAAMVDPNPQVSGNGLS 115 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + G+ EQ +R + F Sbjct: 116 LLEKAG----ITVQSGLLEQSARLLNVGF 140 >gi|320108304|ref|YP_004183894.1| riboflavin biosynthesis protein RibD [Terriglobus saanensis SP1PR4] gi|319926825|gb|ADV83900.1| riboflavin biosynthesis protein RibD [Terriglobus saanensis SP1PR4] Length = 397 Score = 87.7 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 52/149 (34%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M AL A+ VG V +I+ + +R HAEI+A++ Sbjct: 9 DRRHMEQALTLARATSGLASPNPQVGCVLAHGEEIVGQGAHRYVARD----HAEIVALKQ 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC+ CA A+ A + R+ +P +G Sbjct: 65 A-----DGKAKGATAYVTLEPCSHHGRTGPCANALIEAGVARVVAATLDPNPKVSGSGMA 119 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A G+ E+++R + F Sbjct: 120 RIEQAGIVAQ----HGLLEEQARAMNDAF 144 >gi|160896589|ref|YP_001562171.1| CMP/dCMP deaminase [Delftia acidovorans SPH-1] gi|160362173|gb|ABX33786.1| CMP/dCMP deaminase zinc-binding [Delftia acidovorans SPH-1] Length = 174 Score = 87.7 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 53/154 (34%), Gaps = 18/154 (11%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A A A P GA+ + + +++ GN D HAE R Sbjct: 26 LRRAGAVAGRAMAMGRHPFGALLLAPDGETVLAEQGN-----IDTVNHAESTLARTAAAN 80 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE---------NGTQF 116 L + L T EPC MCA I A I R+ YGA + + Sbjct: 81 YPGAYLAQCTLVTTFEPCAMCAGTIYWAGIGRVLYGAEETALLALTGDHPENPTLSLPCR 140 Query: 117 YTLATCHHSPEIYPGI--SEQRSRQIIQDFFKER 148 A + ++ + + + + F+++R Sbjct: 141 EVFARGQRAVQVIGPVPALHEEMLEPHRGFWQQR 174 >gi|152993547|ref|YP_001359268.1| riboflavin biosynthesis protein RibG [Sulfurovum sp. NBC37-1] gi|151425408|dbj|BAF72911.1| riboflavin biosynthesis protein RibG [Sulfurovum sp. NBC37-1] Length = 330 Score = 87.7 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 61/174 (35%), Gaps = 47/174 (27%) Query: 3 KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIIS-RAGNRNRELKDVTAHAEILA 58 +M AL++A P VGAV L+ I++ A K T+HAE+LA Sbjct: 2 SDEFYMQLALDKAWE-YQLLTYPNPAVGAVVTLDGTILAVEAH-----KKAGTSHAEVLA 55 Query: 59 I---------------RMGCRILSQE-------ILPEVDLYVTLEPC------TMCAAAI 90 + RM + E +YVTLEPC CA + Sbjct: 56 LLKAYETLSQSTVDFDRMDAQKAHNFLHTIPKDFFSECSIYVTLEPCSHEGRTPACATLL 115 Query: 91 SLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 ++++ G +P G + G+ E+ + +I+ F Sbjct: 116 EALNLKKVIIGTKDPIEGHGGGMDRLKNN---------TSGVLEEACQALIEPF 160 >gi|91792502|ref|YP_562153.1| riboflavin biosynthesis protein RibD [Shewanella denitrificans OS217] gi|91714504|gb|ABE54430.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Shewanella denitrificans OS217] Length = 378 Score = 87.7 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 18/154 (11%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 MS A++ A+ P VG V V + ++ ++ HAE+ A+ Sbjct: 8 DIEMMSRAIQLAERGRYTTRPNPCVGCVIVKDGIKLAEGYHQKAGFG----HAEVNAL-- 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + + + ++ ++ G Sbjct: 62 AALKSANLSAIGATAYVTLEPCSHFGRTPPCAQTLVESGVAKVVVAITDANPQVAGKGIA 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + E+ G+ + ++ ++ F K R Sbjct: 122 MLREAGI--AVEV--GLLQAQALELNLGFMKRMR 151 >gi|313664896|ref|YP_004046767.1| cytidine and deoxycytidylate deaminase zinc-binding region [Mycoplasma leachii PG50] gi|312950055|gb|ADR24651.1| cytidine and deoxycytidylate deaminase zinc-binding region [Mycoplasma leachii PG50] Length = 147 Score = 87.7 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 4/150 (2%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 M N + + E++ N+IPV + NN I+S A N + KD++ HAEI I Sbjct: 1 MDDFNNILDLLINESKKTIKHNDIPVSCCIIDSNNNILSLAINSRYKNKDISQHAEINVI 60 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L+ L + L TLEPC MC +AI +I +YY + K G I+N Sbjct: 61 NNLINKLNNFNLSKYKLITTLEPCMMCYSAIKQVKINTIYYLVESYKFG-IKNNYSI-ND 118 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + +I + +++ +FF +R Sbjct: 119 QNLN-LIQIKNQKKQTEYIKLLNNFFINKR 147 >gi|320531168|ref|ZP_08032158.1| guanine deaminase family protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320136617|gb|EFW28575.1| guanine deaminase family protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 157 Score = 87.7 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 44/118 (37%), Gaps = 2/118 (1%) Query: 1 MKKG-NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISR-AGNRNRELKDVTAHAEILA 58 M M A+ + +P V V ++IS NR +E D +AHAEI A Sbjct: 1 MTNHLEQIMRQAVVRSITHVESGGLPFVGVIVDGQQVISEFGVNRVQETGDPSAHAEITA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 IR + L + T EPC MC ARI + + + ++ Sbjct: 61 IRDALTSSGRTDLRGTTILATGEPCGMCYRHAVNARIADIRVAVDRDQVAELGFDYRY 118 >gi|256545035|ref|ZP_05472403.1| riboflavin biosynthesis protein RibD [Anaerococcus vaginalis ATCC 51170] gi|256399331|gb|EEU12940.1| riboflavin biosynthesis protein RibD [Anaerococcus vaginalis ATCC 51170] Length = 359 Score = 87.7 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 31/155 (20%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +M E A+ A R + P VGAV V +NKIIS + HAE+ Sbjct: 2 NDKEYMRKCFELAKKA--RGKTLTNPLVGAVLVKDNKIISTGFHHEYGK----THAEVDC 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGA--SNPKGGGI 110 + LYV LEPC+ C I I+++ +NPK Sbjct: 56 FNNL-----KSDCDGAILYVNLEPCSHWGKQGPCTLEIIKRNIKKVIISNIDTNPKV--- 107 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 +G + E+ G+ E +++ + FF Sbjct: 108 -DGLKVLKDNN----IEVVTGLLEDEGKKLNEKFF 137 >gi|330842863|ref|XP_003293388.1| hypothetical protein DICPUDRAFT_58458 [Dictyostelium purpureum] gi|325076278|gb|EGC30077.1| hypothetical protein DICPUDRAFT_58458 [Dictyostelium purpureum] Length = 221 Score = 87.7 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 54/141 (38%), Gaps = 16/141 (11%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A++ A + + A V N ++ N R H EI AI Sbjct: 49 HEKYMRIAIQVAIDNNAK----FAAAIVHKNGTVMCTGVNTGRAR---IYHGEIEAIVNC 101 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG--------IENGT 114 ++ ++ + LY T EPC MC+ AI ++ + + + +++ Sbjct: 102 TQMYGKKTWEDHYLYTTGEPCVMCSGAIMWSKFDKTIFASYVNNMYCERCFNQLPMDSNE 161 Query: 115 QFYTLATCHHSPEIYPGISEQ 135 F +H+ ++ G+ E+ Sbjct: 162 IFKLGYGINHNTQLIGGVLEE 182 >gi|90424160|ref|YP_532530.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris BisB18] gi|90106174|gb|ABD88211.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Rhodopseudomonas palustris BisB18] Length = 383 Score = 87.7 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 47/143 (32%), Gaps = 21/143 (14%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL + R VGAV V + I+ R + HAEI A+ Sbjct: 21 DLRFMQLALSLGRRGQGRTAPNPAVGAVIVKDGVIVGRGWTQPGGR----PHAEIEALNR 76 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 LYVTLEPC CA A+ A + R+ +P G Sbjct: 77 AGLAA-----RGATLYVTLEPCSHHGKTPPCADAVIAAGLARVVSAIEDPNPQVAGQGHA 131 Query: 116 FYTLATCHHSPEIYPGISEQRSR 138 A ++ G+ + Sbjct: 132 RLRAAGI--RVDV--GLGAAEAA 150 >gi|33862648|ref|NP_894208.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus str. MIT 9313] gi|33634564|emb|CAE20550.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus str. MIT 9313] Length = 368 Score = 87.3 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 34/147 (23%), Positives = 51/147 (34%), Gaps = 22/147 (14%) Query: 7 FMSCALEEAQNAALRNEI-P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M AL+ A A R P VGAV + K++ + HAE+ A+ Sbjct: 14 WMRRALQLAALADGRTSPNPLVGAVVLDKAGKLVGEGFHACAGE----PHAEVGALAQAG 69 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + L VTLEPC C A+ A +RR+ +P G Sbjct: 70 KQA-----SGGTLLVTLEPCCHQGRTPPCTEAVIAAGLRRVVVAMQDPDPRVAGAGITRL 124 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ + E + + F Sbjct: 125 RDAGL----EVITAVLELEAAHQNRAF 147 >gi|212696303|ref|ZP_03304431.1| hypothetical protein ANHYDRO_00840 [Anaerococcus hydrogenalis DSM 7454] gi|212676932|gb|EEB36539.1| hypothetical protein ANHYDRO_00840 [Anaerococcus hydrogenalis DSM 7454] Length = 359 Score = 87.3 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 31/155 (20%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +M + A+ A R + P VGAV V + KIIS + HAE+ Sbjct: 2 NDKYYMKKCFDLAKKA--RGKTLKNPLVGAVLVKDGKIISTGYHHEYGK----VHAEVDC 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGA--SNPKGGGI 110 +E LYV LEPC+ C I I+++ +NPK Sbjct: 56 FNNL-----KENADGAVLYVNLEPCSHYGKQGPCTLEIIKRNIKKVIISNIDTNPKV--- 107 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 +G + E+ G+ E +++ + FF Sbjct: 108 -DGLKVLREKG----IEVQTGLLEDEGKKLNEKFF 137 >gi|146308130|ref|YP_001188595.1| CMP/dCMP deaminase, zinc-binding [Pseudomonas mendocina ymp] gi|145576331|gb|ABP85863.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina ymp] Length = 186 Score = 87.3 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 2/117 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTA-HAEILAIRM 61 + + E+A A VGAV + + +++ N+ +A HAE+ + Sbjct: 19 DDTWARLCCEQALLALEEGCYAVGAVLIDDAGELLCSGRNQVFAGHYASAAHAEMQVLDQ 78 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 Q + LYV+LEPC MC + I LA IRR+ Y A + GG + Sbjct: 79 LEAEHPQLDRSGLTLYVSLEPCLMCHSRILLAGIRRVRYLARDRDGGFAARPPRLPR 135 >gi|126641361|ref|YP_001084345.1| CMP/dCMP deaminase zinc-binding [Acinetobacter baumannii ATCC 17978] Length = 116 Score = 87.3 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Query: 46 ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 D TAHAE+LAIR+ ++L L ++ + PC MC AA+ LA I+ + Y SN Sbjct: 2 TTNDPTAHAELLAIRVASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNE 61 Query: 106 KGGGIE-NGTQFYTL 119 G + + Y Sbjct: 62 DGAPFGLSTAEIYAD 76 >gi|149391445|gb|ABR25740.1| tRNA-specific adenosine deaminase [Oryza sativa Indica Group] Length = 106 Score = 87.3 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 9/88 (10%) Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC------ 122 E DLYVT EPC MCA A+S+ IR +Y+G +N K GG + + ++ Sbjct: 2 EKFARCDLYVTCEPCIMCAMALSILGIREVYFGCANDKFGGCGSIMSLHQSSSAELSGEE 61 Query: 123 ---HHSPEIYPGISEQRSRQIIQDFFKE 147 + GI + + + ++F+++ Sbjct: 62 IPGPKGYKCTGGIMAEEAVALFRNFYEQ 89 >gi|254516856|ref|ZP_05128914.1| riboflavin biosynthesis protein RibD [gamma proteobacterium NOR5-3] gi|219674361|gb|EED30729.1| riboflavin biosynthesis protein RibD [gamma proteobacterium NOR5-3] Length = 365 Score = 87.3 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 53/145 (36%), Gaps = 21/145 (14%) Query: 8 MSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL A+ R VG V V ++ I+ + HAE++A++ Sbjct: 1 MARALRLAERGKYWARPNPHVGCVLVRDSGIVGEGFTQPAGGD----HAEVVALKSAGDA 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + YVTLEPC C+ A+ A + R+ G +P G + Sbjct: 57 A-----RDCTAYVTLEPCAHVGRTPPCSQALIEAGVARVVVGLKDPNPKVDGGGLRDLAA 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ + + F Sbjct: 112 AG----IEVSEGLMAAQVELQLAGF 132 >gi|149174623|ref|ZP_01853249.1| riboflavin biosynthesis protein RibD [Planctomyces maris DSM 8797] gi|148846733|gb|EDL61070.1| riboflavin biosynthesis protein RibD [Planctomyces maris DSM 8797] Length = 377 Score = 87.3 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 26/151 (17%) Query: 8 MSCALEEAQNAALRNEI---P-VGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMG 62 M ALE A+ + P VG++ V ++ K+I ++ + HAEI A+ M Sbjct: 14 MHRALELARRG--TGSVEPNPAVGSIIVDHSLKLIGEGYHQ----QCGGPHAEIHALNMA 67 Query: 63 CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQF 116 +YVTLEPC C+ A+ A I+++ +P G + Sbjct: 68 GEQSQ-----GKTIYVTLEPCCHQGKTGPCSQALIRAGIKKVVIAMRDPAPHVDGGGIEE 122 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E ++ +++ F K Sbjct: 123 LKQAG----IEVEVGLLESEAQALVRPFVKR 149 >gi|322489137|emb|CBZ24389.1| putative deaminase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 281 Score = 87.3 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 59/198 (29%), Gaps = 78/198 (39%) Query: 1 MKKG--NVFMSCALEEAQNAALRNEIPVGAVAVLNNK----------------------- 35 M + FM AL+EA+ A E+PVG V V + Sbjct: 1 MSVHYVDAFMRAALKEAELALEEGEVPVGCVLVRTDTNETVYAKLALQLSDDVVNASPHA 60 Query: 36 -------------IISRAGNRNRELKDVTAHAEILA----IRMGCRILSQEI-------- 70 I +R N+ AHAE +A I R Sbjct: 61 APPLSCDQLVESCIAARGRNQTNLQHHALAHAEFIAAQKLIDSATRGGDGSAGARSSKAG 120 Query: 71 ----------------------------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L + LYVT+EPC MC A + RI +++G Sbjct: 121 AGEGENGLVEEEKESGSTSSPTTPPLSGLADYVLYVTVEPCVMCGAMLLYNRIAHVFFGC 180 Query: 103 SNPKGGGIENGTQFYTLA 120 NP+ GG +T Sbjct: 181 RNPRFGGNGTVLALHTSP 198 >gi|167563753|ref|ZP_02356669.1| riboflavin biosynthesis protein RibD [Burkholderia oklahomensis EO147] Length = 369 Score = 87.3 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 52/145 (35%), Gaps = 18/145 (12%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A P VG V V N+ +I + HAE+ A++ Sbjct: 1 MQRALALAARGMYTTTPNPRVGCVIVQNDVVIGEGFTQPAGQD----HAEVQALKDA--R 54 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L + +YVTLEPC CA A+ AR+ ++ +P G Sbjct: 55 TRGGDLRDATVYVTLEPCSHFGRTPPCAHALIDARVGKVVAAMEDPNPQVSGRGLAMLRD 114 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ + ++ F Sbjct: 115 AG----IDVRCGLLTHEAHEMNIGF 135 >gi|149181584|ref|ZP_01860078.1| cytidine/deoxycytidylate deaminase/nudix/methyltransferase domains protein [Bacillus sp. SG-1] gi|148850698|gb|EDL64854.1| cytidine/deoxycytidylate deaminase/nudix/methyltransferase domains protein [Bacillus sp. SG-1] Length = 217 Score = 87.3 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 9/110 (8%) Query: 9 SCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNREL--------KDVTAHAEILAI 59 E+A N+ P+GA N +IS N+ E + AHAEI AI Sbjct: 10 KECFEQAWNSYCSGSFPIGAAITDENGDVISIGRNKVYEKVIEEGQVCNNKIAHAEINAI 69 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 + + + +Y T+EPC +C AI ++ I+ +++ A + G Sbjct: 70 LKINNLETNTNRKKYSIYSTMEPCALCFGAIVMSSIKNVHFAAGDGLAGA 119 >gi|241204003|ref|YP_002975099.1| riboflavin biosynthesis protein RibD [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857893|gb|ACS55560.1| riboflavin biosynthesis protein RibD [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 438 Score = 87.3 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 45/141 (31%), Gaps = 21/141 (14%) Query: 4 GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM+ A+ ++ VG + V I+ RA HAE A+ Sbjct: 7 DERFMAAAIRLSRWHLGRTATNPSVGCLIVRGGVIVGRA----VTALGGRPHAETQALAE 62 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC C+ A+ + R+ ++P G Sbjct: 63 AGALA-----RGATAYVTLEPCSHHGKTPPCSQALIAYGVARVVISVTDPDPRVSGRGIA 117 Query: 116 FYTLATCHHSPEIYPGISEQR 136 A E+ G+ E Sbjct: 118 MLREAG----IEVDTGVLEAE 134 >gi|239982837|ref|ZP_04705361.1| hypothetical protein SalbJ_25624 [Streptomyces albus J1074] Length = 166 Score = 87.3 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 48/127 (37%), Gaps = 3/127 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + +E A A + P G+V V + + + NR D T H E R L Sbjct: 13 LRRCVELAAQALDAGDEPFGSVLVDGDGTVRAEDRNRV-ASGDSTRHPEFALARWAAENL 71 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-HS 125 + +Y + E C MCAAA + + R+ Y AS+ + G N Sbjct: 72 TVAERAAATVYTSGEHCPMCAAAHAWVGLGRIVYAASSEQLTGWLNEWGVPASPVAPLPV 131 Query: 126 PEIYPGI 132 + PG+ Sbjct: 132 AAVAPGV 138 >gi|324528898|gb|ADY48965.1| tRNA-specific adenosine deaminase 2 [Ascaris suum] Length = 134 Score = 86.9 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 53/92 (57%), Gaps = 4/92 (4%) Query: 59 IRMGC---RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + C +EIL E LYVT+EPC MCA A+ +++R+ YGA+N + GG+ + Sbjct: 7 LEQWCLQTNQHIKEILKETTLYVTIEPCIMCACALYYLKLKRIVYGAANERFGGLGSVAN 66 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + + H +I + ++R+ ++++DF+ + Sbjct: 67 R-EMYSSKHLIQIDANVDKERAVKMLKDFYDQ 97 >gi|300022486|ref|YP_003755097.1| riboflavin biosynthesis protein RibD [Hyphomicrobium denitrificans ATCC 51888] gi|299524307|gb|ADJ22776.1| riboflavin biosynthesis protein RibD [Hyphomicrobium denitrificans ATCC 51888] Length = 368 Score = 86.9 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 53/148 (35%), Gaps = 25/148 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILA 58 M+ AL A+ +P VGAV +I++R HAE A Sbjct: 10 DEEMMAIALRMAERGLGAT-MPNPSVGAVIADETTGEILARG----VTAPGGRPHAETQA 64 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 I + + +YVTLEPC+ CA AI A ++R +P Sbjct: 65 IAAAG-----DRVRGATIYVTLEPCSHHGRTGPCAEAIVAAGLKRAVVAIEDPDPRVSGR 119 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQI 140 G A E+ G+ +R+I Sbjct: 120 GLDKLRDAGL----EVVRGVGAAEARRI 143 >gi|90023098|ref|YP_528925.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Saccharophagus degradans 2-40] gi|89952698|gb|ABD82713.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Saccharophagus degradans 2-40] Length = 365 Score = 86.9 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 53/155 (34%), Gaps = 22/155 (14%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 FM+ A++ A+ P VG V V N I+ + HAE+ Sbjct: 8 DQRFMTRAMQLAREGTYTTTPNPRVGCVLVDAANNIVGEGYHVRAGEG----HAEVN--- 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC+ C A+ A + R+ YG +P G Sbjct: 61 --AIADAGAAARGTTAYVTLEPCSHTGKTGPCCEALVAAGVSRVVYGMEDPNPKVAGRGL 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ + E + ++ F K R Sbjct: 119 DHLEAAG----IQVDGPVLEYDAYELNPGFIKRMR 149 >gi|322696336|gb|EFY88130.1| CMP/dCMP deaminase, zinc-binding protein [Metarhizium acridum CQMa 102] Length = 474 Score = 86.9 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 30/56 (53%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 F+ AL+ A+ A NE PVG V V N +I++ N ++ T HAE +AI Sbjct: 153 HLRFIEEALDMARLALRTNETPVGCVLVHNGTVIAKGMNATNVTRNGTRHAEFMAI 208 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 40/123 (32%) Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL--- 119 +S+EI+ E LYVT+EPC MCA+ + I+++Y+GA N K GG + Sbjct: 274 GDSVSREIIRECILYVTVEPCVMCASLLRQLGIKKVYFGAVNDKFGGTGGVFSIHANSLP 333 Query: 120 -------ATCHHSP------------------------------EIYPGISEQRSRQIIQ 142 A+ H +P EI G + +++ Sbjct: 334 VREDGQTASAHPTPRPSQLPDGSGTLGTSYPPGGGDGGNVEEGYEIEGGWGRDEAVGLLR 393 Query: 143 DFF 145 F+ Sbjct: 394 RFY 396 >gi|213972523|ref|NP_001135424.1| adenosine deaminase, tRNA-specific 3, TAD3 homolog [Nasonia vitripennis] Length = 367 Score = 86.9 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 41/79 (51%) Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + + ++ EPC++CA A+ +R+ R++YGA+NPK G + + +++ +H Sbjct: 283 KCAPYLCTGYWAFLLQEPCSLCAMALLHSRVSRIFYGATNPKTGILGSRATLHSVPGLNH 342 Query: 125 SPEIYPGISEQRSRQIIQD 143 +++ + + ++ Sbjct: 343 RYQVWSELLRDECEETLKA 361 >gi|225077298|ref|ZP_03720497.1| hypothetical protein NEIFLAOT_02357 [Neisseria flavescens NRL30031/H210] gi|224951442|gb|EEG32651.1| hypothetical protein NEIFLAOT_02357 [Neisseria flavescens NRL30031/H210] Length = 370 Score = 86.9 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 54/149 (36%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M ALE A+ + P VG V +I+ + + HAE+ A+R Sbjct: 6 DTQMMQTALELAKLGRFSTSPNPRVGCVIAHGAQIVGQGFHVKAGE----PHAEVHALRQ 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ + + R+ ++P G Sbjct: 62 AGAAAKGAT-----AYVTLEPCSHYGRTPPCAEALVHSGVTRVVAAMTDPNPLVAGKGLS 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E G+ E ++R++ + F Sbjct: 117 MLEAAGI--RTE--SGLLEAQARELNRGF 141 >gi|281212623|gb|EFA86783.1| hypothetical protein PPL_00588 [Polysphondylium pallidum PN500] Length = 217 Score = 86.9 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 55/146 (37%), Gaps = 18/146 (12%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEILAIR 60 K +M A + A +N + V V N ++ N+N H E++AI Sbjct: 44 KYHEKYMQIAYDLA---IEKNNL-FTTVIVAPNGTVACTGLNQNE--NSAIYHGEMVAIM 97 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS------NPKGGGIENGT 114 RI ++ LY T E C MC AA A ++ YG S + G I + Sbjct: 98 NCSRIHNKNTWEGYSLYTTGESCVMCHAAAMWAGFSKVIYGTSIQTMYCDKCLGQIPVLS 157 Query: 115 Q-----FYTLATCHHSPEIYPGISEQ 135 Y L+ + ++ GI + Sbjct: 158 NQINALAYGLSGNNSPAQVIGGILRK 183 >gi|241759512|ref|ZP_04757616.1| riboflavin biosynthesis protein RibD [Neisseria flavescens SK114] gi|241320294|gb|EER56627.1| riboflavin biosynthesis protein RibD [Neisseria flavescens SK114] Length = 367 Score = 86.9 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M ALE A+ + P VG V +I+ + + + + HAE+ A+R Sbjct: 6 DTQMMQTALELAKLGRFSTSPNPRVGCVIAHGAQIVGQGFH--VKAGEP--HAEVHALRQ 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ + + R+ ++P G Sbjct: 62 AGAAAKGAT-----AYVTLEPCSHYGRTPPCAEALVHSGVTRVVAAMTDPNPLVAGKGLS 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E G+ E ++R++ + F Sbjct: 117 MLEAAGI--RTE--SGLLEAQARELNRGF 141 >gi|242764976|ref|XP_002340880.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500] gi|218724076|gb|EED23493.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500] Length = 154 Score = 86.9 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 1/99 (1%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++ ++ A+ A + P G++ V +I+ A NR +D+T H E + Sbjct: 5 SDINYLRRCVDLAREAVDAGDAPFGSILVNAAGEILQEARNRVTTEEDITLHPEFTLVIW 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + LS +Y + E C MCA+A + A + R+ Y Sbjct: 65 AQKHLSPTERATTTVYTSGEHCPMCASAHAYADLGRIVY 103 >gi|284043910|ref|YP_003394250.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM 14684] gi|283948131|gb|ADB50875.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM 14684] Length = 195 Score = 86.9 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 2/97 (2%) Query: 14 EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-HAEILAIRMG-CRILSQEIL 71 A A VGAV V + ++++ NR E T HAE A+ R Sbjct: 43 LALEAMEAGNYGVGAVLVRDGEVVAEGRNRLLEPYVRTDCHAETEAVDQFEARFRDFPDA 102 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 L+ +LE C MC + IR +YY A + GG Sbjct: 103 TGTVLWTSLECCPMCTVRLINTGIREVYYAAPDADGG 139 >gi|54026442|ref|YP_120684.1| putative deaminase [Nocardia farcinica IFM 10152] gi|54017950|dbj|BAD59320.1| putative deaminase [Nocardia farcinica IFM 10152] Length = 169 Score = 86.9 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 2/103 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 + + +E A+ A + P G+V V ++ A N D T H E R Sbjct: 12 EADRAHLRRCVELARAALAEGDEPFGSVLVDGAGEVRFEARNA-IVSGDPTRHPEFEIAR 70 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 LS +Y + E C MC+AA + A + R+ Y S Sbjct: 71 WAGTHLSSAERAASTVYTSGEHCPMCSAAHAWAGLGRIVYAVS 113 >gi|66815967|ref|XP_642000.1| cytidine deaminase-like protein [Dictyostelium discoideum AX4] gi|60470041|gb|EAL68022.1| cytidine deaminase-like protein [Dictyostelium discoideum AX4] Length = 519 Score = 86.9 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%) Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L Q + L++T EPC MC+ A+ +R++R+ YG+S+ + GG+ + + +T + +H Sbjct: 439 LGQYLATNFHLFITKEPCIMCSMALVHSRVKRVVYGSSS-RDGGLGSYLKIHTEKSLNHR 497 Query: 126 PEIYPGISEQRSRQII 141 E+Y E +++ Sbjct: 498 FEVYKDFMEDECKKLF 513 Score = 41.4 bits (97), Expect = 0.038, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 5/48 (10%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRE 46 M+K +MS A+E+A+ R +GAV + NKI++ + ++ Sbjct: 293 MRK---YMSLAIEQAEIGKKRGHKGIGAVLIDPNTNKIVATSYDQTNR 337 >gi|261393155|emb|CAX50767.1| riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific deaminase) and 5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP reductase)] [Neisseria meningitidis 8013] Length = 369 Score = 86.9 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 58/159 (36%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL+ A + P VG V ++I+ + + HAE+ A+ Sbjct: 4 ETDISMMQNALKLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + +VTLEPC CA A+ + + R+ +P G Sbjct: 60 RQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 115 LALLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149 >gi|224130250|ref|XP_002320789.1| predicted protein [Populus trichocarpa] gi|222861562|gb|EEE99104.1| predicted protein [Populus trichocarpa] Length = 199 Score = 86.9 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 55/151 (36%), Gaps = 33/151 (21%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 K +M +E A+ A P VG V V + HAE+ A+ Sbjct: 29 KDDGFYMRRCVELARKAIGCTSPSPMVGCVIVKAGQ----------------PHAEVFAL 72 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + YV+LEPC C+ + A+++ + G +P G Sbjct: 73 RDAGDVAEN-----ATAYVSLEPCNHYGRTPPCSEVMVKAKLKEVVIGMIDPNPIVATRG 127 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 Q A ++ G+ E+ +++I+ F Sbjct: 128 VQRLRDAG----IDVVVGVEEELCKRLIEAF 154 >gi|291302009|ref|YP_003513287.1| CMP/dCMP deaminase zinc-binding protein [Stackebrandtia nassauensis DSM 44728] gi|290571229|gb|ADD44194.1| CMP/dCMP deaminase zinc-binding protein [Stackebrandtia nassauensis DSM 44728] Length = 419 Score = 86.9 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 45/131 (34%), Gaps = 26/131 (19%) Query: 4 GNVFMSCALEEAQN------AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 ++ A+ A A VGAV V + ++++ +R + D HAE Sbjct: 3 DEHWLRQAIALAAKCPPSDTAFS-----VGAVIVADGRVLATGYSRETDPHD---HAE-- 52 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGI 110 + L +Y +LEPC CA I AR+ R+ Y P Sbjct: 53 ---EAALSKLDQDLSGATVYSSLEPCGQRASRPVSCAELIIAARVPRVVYAWREPDTFVQ 109 Query: 111 ENGTQFYTLAT 121 G + A Sbjct: 110 PKGLRLLAEAR 120 >gi|255602376|ref|XP_002537841.1| riboflavin-specific deaminase, putative [Ricinus communis] gi|223514866|gb|EEF24541.1| riboflavin-specific deaminase, putative [Ricinus communis] Length = 110 Score = 86.9 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 19/114 (16%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 + +M+ AL A P VG V V N +++ + HAE+ A Sbjct: 5 SQDIEWMTRALRLAARGLYTT-TPNPRVGCVIVKNGQLVGEGAHLKAGE----PHAEVHA 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106 +R E YVTLEPC CA A+ A + R+ +P Sbjct: 60 LRAAG-----EQARGATAYVTLEPCSHFGRTPPCADALVNAGVSRVVVAMQDPN 108 >gi|254787858|ref|YP_003075287.1| cytosine deaminase [Teredinibacter turnerae T7901] gi|237685613|gb|ACR12877.1| cytosine deaminase [Teredinibacter turnerae T7901] Length = 153 Score = 86.9 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 41/123 (33%), Gaps = 9/123 (7%) Query: 12 LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71 ++A + +P+GA + ++++ N + H E I Sbjct: 14 YQQALKSFHEGGVPIGACIMQAGQVVAVGHNHRIQCGSNIRHGETDCIEKCG---HTVDF 70 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT-----CHHSP 126 +V L+ +L PC MC AI L I R+ N E +H P Sbjct: 71 SQVTLFSSLTPCLMCTGAIILYSIPRVVI-LDNINIHDYETNLDMLRERNVEVKILNHEP 129 Query: 127 EIY 129 I Sbjct: 130 SIE 132 >gi|291454680|ref|ZP_06594070.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291357629|gb|EFE84531.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 163 Score = 86.9 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 48/127 (37%), Gaps = 3/127 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + +E A A + P G+V V + + + NR D T H E R L Sbjct: 10 LRRCVELAAQALDAGDEPFGSVLVDGDGTVRAEDRNRV-ASGDSTRHPEFALARWAAENL 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-HS 125 + +Y + E C MCAAA + + R+ Y AS+ + G N Sbjct: 69 TVAERAAATVYTSGEHCPMCAAAHAWVGLGRIVYAASSEQLTGWLNEWGVPASPVAPLPV 128 Query: 126 PEIYPGI 132 + PG+ Sbjct: 129 AAVAPGV 135 >gi|120404037|ref|YP_953866.1| CMP/dCMP deaminase [Mycobacterium vanbaalenii PYR-1] gi|119956855|gb|ABM13860.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium vanbaalenii PYR-1] Length = 159 Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 2/103 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 VF+ + A+ A + P G++ V + NR + D T H E R Sbjct: 5 DDDLVFLRRCVSLARTALDGGDEPFGSLLVDHEGSVRFEDHNRV-KDGDATRHPEFAIAR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 LS +Y + E C MCAAA + + R+ Y AS Sbjct: 64 WAVEHLSPAQRNRSTVYTSGEHCPMCAAAHAWVGLGRVVYAAS 106 >gi|239624923|ref|ZP_04667954.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521309|gb|EEQ61175.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 161 Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 1/106 (0%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ + + A+ A + V V I+ N KD TAH + + Sbjct: 5 WREDDYYFERTEALAREAMKAGDDGFACVLVGPEGDILMEQKNEAGTQKDPTAHDVMALV 64 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 R S L E +Y +EPC MC A+ A+I R+ Y S Sbjct: 65 RRAVHEYSPGQLQECTVYALMEPCVMCMGALFWAKIGRVKYAMSEE 110 >gi|325127564|gb|EGC50487.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis N1568] Length = 369 Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M AL A + P VG V ++I+ + + HAE+ A+ Sbjct: 4 DTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + +VTLEPC CA A+ A + R+ +P G Sbjct: 60 RQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 115 LALLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149 >gi|54296165|ref|YP_122534.1| hypothetical protein lpp0188 [Legionella pneumophila str. Paris] gi|53749950|emb|CAH11335.1| hypothetical protein lpp0188 [Legionella pneumophila str. Paris] Length = 153 Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 13/149 (8%) Query: 1 MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILA 58 M K FM+ +E A + P GA+ V ++ +I+ ++ N + H E+ Sbjct: 1 MDKYIYDFMAATIEVAATNPMA---PYGAIIVYDDKEILLKSVN--NAHNNPLMHGELSV 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS----NPKGGGIENGT 114 I + + LY T EPC MCAAAI A I ++ YG+S + G Sbjct: 56 IHRLFENGFDGDVSRLSLYTTAEPCPMCAAAIYWAMIPKVVYGSSISFLHELFGRQIQVD 115 Query: 115 --QFYTLATCHHSPEIYPGISEQRSRQII 141 + + + ++ G+ E+ Q+ Sbjct: 116 AKEILSKTPNFYECQLLGGVMEKNCNQLF 144 >gi|194290427|ref|YP_002006334.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase (n-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase [Cupriavidus taiwanensis LMG 19424] gi|193224262|emb|CAQ70271.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase [Cupriavidus taiwanensis LMG 19424] Length = 371 Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 47/125 (37%), Gaps = 16/125 (12%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VG V + + ++I + + HAEI A++ YVTLEPC Sbjct: 30 VGCVLIKDGQVIGQGFTQPAGQD----HAEIQAMKDALSRGLDP--AGATAYVTLEPCSH 83 Query: 84 ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA A+ A + R+ +P G Q A ++ G+ E+ +R Sbjct: 84 FGRTPPCADALVRAGVARVVAAMEDPNPSVSGRGLQRLRDAG----IDVRCGLLEKEARD 139 Query: 140 IIQDF 144 + F Sbjct: 140 LNIGF 144 >gi|325924396|ref|ZP_08185931.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xanthomonas gardneri ATCC 19865] gi|325545120|gb|EGD16439.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xanthomonas gardneri ATCC 19865] Length = 364 Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 21/150 (14%) Query: 3 KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + M+ AL A+ A P VG V V + + ++ AHAE+ Sbjct: 6 DDHRCMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGG----AHAEVF--- 58 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + + YVTLEPC CA A+ A +RR+ ++P G Sbjct: 59 --ALRAAGALARGATAYVTLEPCAHYGRTPPCALALIEAGVRRVVAAMADPFPQVNGGGF 116 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ + ++R + Q F Sbjct: 117 ALLREAG----IEVLSGVMQAQARVLNQGF 142 >gi|46138639|ref|XP_391010.1| hypothetical protein FG10834.1 [Gibberella zeae PH-1] Length = 173 Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 7/106 (6%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKD------VTAHA 54 ++ + A+ A A + P G+V V +NK++ NR D T H Sbjct: 4 EQDREHLRLAVSLAHEALKAGDAPFGSVLVSSDNKVLQTDRNRTVTGSDGDSRPDATLHP 63 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E R LS E +Y + E C MC+AA + + R+ Y Sbjct: 64 EFTLARWAQLNLSAEERKNSTVYTSGEHCAMCSAAHAWCGLGRIVY 109 >gi|325983451|ref|YP_004295853.1| riboflavin biosynthesis protein RibD [Nitrosomonas sp. AL212] gi|325532970|gb|ADZ27691.1| riboflavin biosynthesis protein RibD [Nitrosomonas sp. AL212] Length = 366 Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 53/153 (34%), Gaps = 29/153 (18%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI-- 59 FMS AL A+ P VG V L+++II + + HAEI A+ Sbjct: 6 DYAFMSYALRLAEKGLYSTTPNPRVGCVLTLDDRIIGSGWH--EKAGQP--HAEINALAS 61 Query: 60 --RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 C Y+TLEPC C A+ A I ++ +P Sbjct: 62 TSEAAC---------GATAYITLEPCSHYGRTPPCVYALIDAGITKVIIAMEDPNPMVSG 112 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A + G+ + +++ + F Sbjct: 113 RGCMLLEQAG----ITVQTGLLQVQAQALNIGF 141 >gi|15677653|ref|NP_274814.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis MC58] gi|7227070|gb|AAF42152.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis MC58] gi|325139638|gb|EGC62177.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis CU385] Length = 369 Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M AL A + P VG V ++I+ + + HAE+ A+ Sbjct: 4 DTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + +VTLEPC CA A+ A + R+ +P G Sbjct: 60 RQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 115 LALLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149 >gi|85000845|ref|XP_955141.1| deaminase [Theileria annulata strain Ankara] gi|65303287|emb|CAI75665.1| deaminase, putative [Theileria annulata] Length = 297 Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 16/119 (13%) Query: 28 AVAVLNNKIISRAGNRNRELKDVTAHAEILA---IRMGCRIL--------SQEILPEVDL 76 + +K+IS A ++ ++ HA ILA I + + D+ Sbjct: 180 CIITFKDKVISTAFDKR--DVNILKHASILAVGKIAEAKKKRETQKMKDFPDYLCTGCDV 237 Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE---IYPGI 132 Y++ EPC MC A+ +RI ++ YG N K G + + + +H + P I Sbjct: 238 YLSHEPCCMCGMALLHSRISKVIYGIKNQKLGCFGSVWNLHNMIELNHHFRAFTVTPNI 296 >gi|325846504|ref|ZP_08169419.1| riboflavin biosynthesis protein RibD [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481262|gb|EGC84303.1| riboflavin biosynthesis protein RibD [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 359 Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 59/155 (38%), Gaps = 31/155 (20%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +M + A+NA R + P VGAV V + KIIS + HAE+ Sbjct: 2 NDKYYMKKCFDLAKNA--RGKTLKNPLVGAVLVKDGKIISTGYHHEYGK----VHAEVDC 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGA--SNPKGGGI 110 +E LYV LEPC+ C I I+++ +NPK Sbjct: 56 FNNL-----KENADGAVLYVNLEPCSHYGKQGPCTLEIIKRNIKKVIISNIDTNPKV--- 107 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 +G + E+ G+ E +++ + FF Sbjct: 108 -DGLKVLREKG----IEVQTGLLEDEGKKLNEKFF 137 >gi|73540480|ref|YP_295000.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Ralstonia eutropha JMP134] gi|72117893|gb|AAZ60156.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Ralstonia eutropha JMP134] Length = 371 Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 46/125 (36%), Gaps = 16/125 (12%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VG V N +II + + HAEI A++ YVTLEPC Sbjct: 30 VGCVLSKNGQIIGQGFTQPAGQD----HAEIQALKDAQTRGIDP--AGATAYVTLEPCSH 83 Query: 84 ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA A+ A I R+ +P G Q A ++ G+ E+ +R Sbjct: 84 FGRTPPCADALVRAGIARVVAAMEDPNPSVSGRGLQRLRDAG----IDVRCGLLEKEARD 139 Query: 140 IIQDF 144 + F Sbjct: 140 LNIGF 144 >gi|115399304|ref|XP_001215241.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114192124|gb|EAU33824.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 165 Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 1/107 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 ++ +E A+ A + P G+V V I+ NR DVT H E+ Sbjct: 4 NTDITYLRRCVELAREALQAGDAPFGSVLVDAAGNILKEDRNRTVTDADVTLHPELTLAL 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 + LSQ +Y + E C MCAA + + R+ Y +S+ + Sbjct: 64 WAQKNLSQNERATATVYTSGEHCPMCAAVHANVGLGRIVYASSSAQF 110 >gi|121634268|ref|YP_974513.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase/phosphoribosylamino)uracil reductase [Neisseria meningitidis FAM18] gi|120865974|emb|CAM09711.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase/phosphoribosylamino)uracil reductase [Neisseria meningitidis FAM18] gi|254670038|emb|CBA04840.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Neisseria meningitidis alpha153] gi|325131464|gb|EGC54171.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis M6190] gi|325137571|gb|EGC60152.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis ES14902] Length = 369 Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M AL A + P VG V ++I+ + + HAE+ A+ Sbjct: 4 DTDISMMETALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + +VTLEPC CA A+ + + R+ +P G Sbjct: 60 RQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 115 LALLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149 >gi|261381200|ref|ZP_05985773.1| riboflavin biosynthesis protein RibD [Neisseria subflava NJ9703] gi|284795821|gb|EFC51168.1| riboflavin biosynthesis protein RibD [Neisseria subflava NJ9703] Length = 372 Score = 86.1 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M ALE A+ + P VG V +I+ + + + + HAE+ A+R Sbjct: 6 DTQMMQTALELAKLGRFSTSPNPRVGCVIAHGAQIVGQGFH--VKAGEP--HAEVHALRQ 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ + + R+ ++P G Sbjct: 62 AGAAAKGAT-----AYVTLEPCSHYGRTPPCAEALVHSGVTRVVAAMTDPNPLVSGKGLS 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E G+ E ++R++ + F Sbjct: 117 MLEAAGI--RTE--SGLLEAQARELNRGF 141 >gi|71027665|ref|XP_763476.1| hypothetical protein [Theileria parva strain Muguga] gi|68350429|gb|EAN31193.1| hypothetical protein, conserved [Theileria parva] Length = 312 Score = 86.1 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 16/119 (13%) Query: 28 AVAVLNNKIISRAGNRNRELKDVTAHAEILA---IRMGCRI--------LSQEILPEVDL 76 + +K+IS A + ++ HA ILA I + + ++ Sbjct: 180 CIITFKDKVISTAF--DERDVNILKHASILAVNKIAEAKKKRETQKIKDYPDYLCTGCEV 237 Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE---IYPGI 132 Y++ EPC MC A+ +RI ++ YG N K G + + + +H + P I Sbjct: 238 YLSHEPCCMCGMALLHSRISKVIYGIKNHKLGCFGSVWNLHNMIELNHRFRAFTVTPNI 296 >gi|328886795|emb|CCA60034.1| cytidine or deoxycytidine deaminase [Streptomyces venezuelae ATCC 10712] Length = 145 Score = 86.1 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 1/101 (0%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + A+ A A + P G++ + +++ A N R D+TAH E+ R Sbjct: 6 DETLLRRAVGIAARAVTLGDAPYGSLLAGPDGTVLAEAHNTVRRDNDITAHPELKLARWA 65 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 R L+ E LY + +PC MC I + I R+ Y S Sbjct: 66 ARELAPETAAGTTLYTSCQPCGMCGGGIIRSGIGRVVYALS 106 >gi|91788744|ref|YP_549696.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine deaminase [Polaromonas sp. JS666] gi|91697969|gb|ABE44798.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Polaromonas sp. JS666] Length = 373 Score = 86.1 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 20/157 (12%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAV--LNNKIISRAGNRNRELKDVTAHAEI 56 MK F+ ALE A++A R+E P VG V + +++ + AHAEI Sbjct: 1 MKPPPPFIDQALELARHAVGRSEPNPRVGCVIASADDQRVLGTGDTQAVGG----AHAEI 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 +A+R ++ YVTLEPC+ C A+ A I+++ ++P Sbjct: 57 MALRDAAARRH--VVAGATAYVTLEPCSHHGRTGPCCDALIAAGIKKVVASIADPNPLVS 114 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G + A E+ G SR++ FF Sbjct: 115 GQGFERMRAAG----IEVVVGPGAAESRELNIGFFSR 147 >gi|75675917|ref|YP_318338.1| riboflavin biosynthesis protein RibD [Nitrobacter winogradskyi Nb-255] gi|74420787|gb|ABA04986.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Nitrobacter winogradskyi Nb-255] Length = 387 Score = 86.1 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 40/110 (36%), Gaps = 17/110 (15%) Query: 4 GNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL + A VGAV V + I+ R + HAE A+R Sbjct: 21 DLHFMQLALALGRRSLGASAPNPAVGAVIVKDGVIVGRGWTQPGGR----PHAEAEALRR 76 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNP 105 LYVTLEPC CA A+ A I R+ +P Sbjct: 77 AGEAA-----RGATLYVTLEPCSHVGKTPPCADAVIAAGITRVVSAIEDP 121 >gi|163742965|ref|ZP_02150348.1| riboflavin biosynthesis protein RibD [Phaeobacter gallaeciensis 2.10] gi|161383648|gb|EDQ08034.1| riboflavin biosynthesis protein RibD [Phaeobacter gallaeciensis 2.10] Length = 372 Score = 86.1 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 49/151 (32%), Gaps = 21/151 (13%) Query: 3 KGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FMS AL + VG V V + +I+ R + HAE A++ Sbjct: 10 EDARFMSLALSLGRRGLGNCWPNPAVGCVIVRDGRIVGRGWTQPGGR----PHAEPQALQ 65 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + +YV+LEPC CA A+ A R+ + +G Sbjct: 66 QAGDLA-----RGATVYVSLEPCSHTGKTPPCAQALINAGAARVVAAIEDSDPRVSGHGF 120 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A + G+ + FF Sbjct: 121 AMLRDAGIP----VTTGVCSDVAAWDHAGFF 147 >gi|322834072|ref|YP_004214099.1| riboflavin biosynthesis protein RibD [Rahnella sp. Y9602] gi|321169273|gb|ADW74972.1| riboflavin biosynthesis protein RibD [Rahnella sp. Y9602] Length = 378 Score = 86.1 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ A E A+ P VG V VLN +I+ + HAE+ A+R Sbjct: 12 TDEHYMARAFELARRGRFTTTPNPNVGCVIVLNGEIVGEGYHLRAGE----PHAEVHALR 67 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC CA A+ A + R+ +P G Sbjct: 68 MAGEKA-----KGATAYVTLEPCSHHGRTPPCADALLAAGVARVVAAMQDPNPEVAGRGL 122 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 ++ G+ ++ + F K R Sbjct: 123 YRLKQNG----VDVSHGLMHPQAEAVNLGFLKRMR 153 >gi|325676735|ref|ZP_08156408.1| cytidine/deoxycytidylate deaminase [Rhodococcus equi ATCC 33707] gi|325552283|gb|EGD21972.1| cytidine/deoxycytidylate deaminase [Rhodococcus equi ATCC 33707] Length = 172 Score = 86.1 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 2/97 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + +E A A L + P G+V + ++ NR D T H E R L Sbjct: 24 LQRCVELAAEALLAGDEPFGSVLATADGTAVAEDRNR-IADGDSTRHPEFELARWAAENL 82 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 S E +Y + E C MCAAA + + R+ Y AS Sbjct: 83 SAEERAGATVYTSGEHCPMCAAAHAWVGLGRIVYVAS 119 >gi|312139813|ref|YP_004007149.1| cytidine/deoxycytidylate deaminase [Rhodococcus equi 103S] gi|311889152|emb|CBH48465.1| putative cytidine/deoxycytidylate deaminase [Rhodococcus equi 103S] Length = 166 Score = 86.1 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 2/97 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + +E A A L + P G+V + ++ NR D T H E R L Sbjct: 18 LQRCVELAAEALLAGDEPFGSVLATADGTAVAEDRNR-IADGDSTRHPEFELARWAAENL 76 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 S E +Y + E C MCAAA + + R+ Y AS Sbjct: 77 SAEERAGATVYTSGEHCPMCAAAHAWVGLGRIVYVAS 113 >gi|299142094|ref|ZP_07035228.1| riboflavin biosynthesis protein RibD [Prevotella oris C735] gi|298576556|gb|EFI48428.1| riboflavin biosynthesis protein RibD [Prevotella oris C735] Length = 122 Score = 86.1 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 13/126 (10%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M L+ A+N VGAV V +++II + HAE+ A Sbjct: 2 EHEYYMKRCLQLAENGRQNAKPNPMVGAVIVAHDRIIGEGYHVRCGEG----HAEVNAF- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 R +++LPE +YV+LEPC CA I I+R G +P G Sbjct: 57 ASVRPEDEKLLPEATIYVSLEPCSHYGKTPPCADLIISKGIKRCVCGCVDPFAKVQGRGI 116 Query: 115 QFYTLA 120 Q A Sbjct: 117 QRMRDA 122 >gi|260223441|emb|CBA34012.1| hypothetical protein Csp_B21900 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 468 Score = 86.1 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 7/99 (7%) Query: 10 CALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A AQ A + P GA+ V + +++ GN D HAE R + Sbjct: 22 RANAVAQRALTLGKHPFGAILVAPDGETVLAEQGNV-----DTVNHAESALARTAATNFT 76 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 E L + L T+EPC MCA A I L +G + + Sbjct: 77 PEYLWDCTLVTTVEPCAMCAGTQYWANIGTLVFGMTERR 115 >gi|308389915|gb|ADO32235.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis alpha710] gi|325135601|gb|EGC58218.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis M0579] gi|325207519|gb|ADZ02971.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NZ-05/33] Length = 369 Score = 86.1 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 58/159 (36%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL+ A + P VG V ++I+ + + HAE+ A+ Sbjct: 4 ETDISMMQNALKLAALGRFSTSPNPRVGCVIAQGSQIVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + +VTLEPC CA A+ + + R+ +P G Sbjct: 60 RQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 115 LALLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149 >gi|86137887|ref|ZP_01056463.1| riboflavin biosynthesis protein RibD [Roseobacter sp. MED193] gi|85825479|gb|EAQ45678.1| riboflavin biosynthesis protein RibD [Roseobacter sp. MED193] Length = 357 Score = 86.1 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 50/146 (34%), Gaps = 21/146 (14%) Query: 8 MSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL + VG V V +I+ R + HAE+ A+ ++ Sbjct: 1 MALALSLGRRGQGNCWPNPAVGCVLVREGRIVGRGWTQPGGR----PHAEVAALAQAGKL 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +VTLEPC CA A+ A I RL + G + Sbjct: 57 A-----RGATAFVTLEPCSHHGKTPPCAQALIDAGIARLVAAVGDSDPRVSGQGFEMLRQ 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ + + + FF Sbjct: 112 AG----IEVEVGVLSEEAARDHAGFF 133 >gi|296269350|ref|YP_003651982.1| riboflavin biosynthesis protein RibD [Thermobispora bispora DSM 43833] gi|296092137|gb|ADG88089.1| riboflavin biosynthesis protein RibD [Thermobispora bispora DSM 43833] Length = 362 Score = 86.1 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 57/162 (35%), Gaps = 30/162 (18%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-P---VGAVAVLN-NKIISRAGNRNRELKDVTAHAEI 56 + + +M A+E A A P VG V V +I+ + HAEI Sbjct: 3 SRDDHYMRRAIELA--ARGHGGTSPNPVVGCVVVDPTGEIVGEGFHAYAGG----PHAEI 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 +A+R E YVTLEPC C AA+ A + R+ +P Sbjct: 57 VALRQAG-----ERARGATAYVTLEPCDHTGRTGPCTAALLQAGVARVVVAVPDPNPVAA 111 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 H + G+ + ++ +++ + RR Sbjct: 112 GGAETLLR-----HGVTVDVGVLAAEAERVNEEWLTYMRARR 148 >gi|213024170|ref|ZP_03338617.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 65 Score = 86.1 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 24/58 (41%) Query: 88 AAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A+ +RI R+ +GA + K G + +H EI G+ ++ FF Sbjct: 1 GAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRVEIIEGVLRDECATLLSVFF 58 >gi|254500590|ref|ZP_05112741.1| riboflavin biosynthesis protein RibD [Labrenzia alexandrii DFL-11] gi|222436661|gb|EEE43340.1| riboflavin biosynthesis protein RibD [Labrenzia alexandrii DFL-11] Length = 375 Score = 86.1 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 61/162 (37%), Gaps = 27/162 (16%) Query: 2 KKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNN-----KIISRAGNRNRELKDVTAHA 54 + N FM+ A A+ R V A+ V N ++ R + AHA Sbjct: 6 ETDNRFMAAAERLARRGLGRVWPNPAVAALIVQENSEGVPVLVGRG----VTSRPGMAHA 61 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108 E+ A+ + YVTLEPC C+ A+ A + R+ G +P Sbjct: 62 EVNALTQAGELA-----KGATCYVTLEPCSHYGRTPPCSLALIEAGVSRVVVGMMDPNPR 116 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF-FKERR 149 G A E+ G+ E+ + + + F +++RR Sbjct: 117 VSGRGVGMLQDAG----IELVTGVRERALKDLYRGFTYRQRR 154 >gi|148272143|ref|YP_001221704.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830073|emb|CAN01002.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 356 Score = 86.1 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 56/143 (39%), Gaps = 21/143 (14%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M LE A P VG V + ++I+ +R +AHAE+ A+R Sbjct: 25 MRRGLELAAEGPAWGPNPRVGCVILDARGRVIAEGRHR----GAGSAHAEVDALRQ---- 76 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L VTLEPC CAAA+ A + R+ Y ++P G+E+ L Sbjct: 77 LPAGAARGSTAVVTLEPCNHTGRTGPCAAALIEAGVARVAYAVADP---GVESSGGAARL 133 Query: 120 ATCHHSPEIYPGISEQRSRQIIQ 142 E+ G+ + ++ Sbjct: 134 RAA--GIEVIDGVLADEAAAFLR 154 >gi|70728414|ref|YP_258163.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens Pf-5] gi|68342713|gb|AAY90319.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens Pf-5] Length = 368 Score = 86.1 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 53/151 (35%), Gaps = 21/151 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL A+ P VG V ++++ +R HAE+ A+ Sbjct: 6 EVDFQHMQHALSLAERGSHSTWPNPRVGCVIAHGSQVVGEGWHRRAGG----PHAEVFAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 R + YVT+EPC+ C A+ + + + +P G Sbjct: 62 RQAGGLA-----RGATAYVTMEPCSHVGRTGACHQALIDSGVHSVVVAHQDPFEQVNGQG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + E+ G+ E ++++ + F Sbjct: 117 IAQLR----NAGIEVRVGLLESAAQELNRGF 143 >gi|330443905|ref|YP_004376891.1| riboflavin biosynthesis protein RibD [Chlamydophila pecorum E58] gi|328807015|gb|AEB41188.1| riboflavin biosynthesis protein RibD [Chlamydophila pecorum E58] Length = 372 Score = 86.1 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 25/151 (16%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 ++ +FM A+E + + P VG V V N KI+S + HAE + Sbjct: 6 EQQQLFMRRAIEIGERGRIT--TPPNPWVGCVLVKNGKILSEGYH--EYPGGP--HAEEI 59 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 AIR L +Y++LEPC C + R+ ++ +P Sbjct: 60 AIRKA-----HVSLEGAQVYLSLEPCSHYGKQPPCTDLLIKHRVAEVFIALKDPDCRVSG 114 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 G + + ++ G+ E R+R+ +Q Sbjct: 115 KGIESLK----NVGIRVHVGLEEARARKSLQ 141 >gi|190572874|ref|YP_001970719.1| putative nucleotide deaminase [Stenotrophomonas maltophilia K279a] gi|254523836|ref|ZP_05135891.1| CMP/dCMP deaminase, zinc-binding protein [Stenotrophomonas sp. SKA14] gi|190010796|emb|CAQ44405.1| putative nucleotide deaminase [Stenotrophomonas maltophilia K279a] gi|219721427|gb|EED39952.1| CMP/dCMP deaminase, zinc-binding protein [Stenotrophomonas sp. SKA14] Length = 186 Score = 86.1 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 17/149 (11%) Query: 10 CALEEAQNAALRN-EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A+E ++ P GAV ++K+I+ NR AHAE +A + + L Sbjct: 33 LAIELSRLNVEHASGGPFGAVVFGPDDKVIAAGVNRVMPHATSLAHAENMAYMLAQQRLQ 92 Query: 68 QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA--- 120 L V L + +PC C A A I RL GA++ +E T F Sbjct: 93 TPRLNAVLSPVTLATSSQPCCQCYGATVWAGIDRLLIGANSAD---VEELTPFDEGPLPA 149 Query: 121 ----TCHHS-PEIYPGISEQRSRQIIQDF 144 + E+ G++ +R +++ + Sbjct: 150 DWVGELNKRGIEVVQGLNRDAARSVLRAY 178 >gi|58271532|ref|XP_572922.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|134115302|ref|XP_773949.1| hypothetical protein CNBH4010 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256577|gb|EAL19302.1| hypothetical protein CNBH4010 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229181|gb|AAW45615.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21] Length = 224 Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 26/127 (20%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP------VGAVAV--LNNKIISRAGNRNRELKDVTAH 53 + +M ++E +P G+V V NN+++ N E+ D T H Sbjct: 35 EVDLHWMRKSIEV---------MPPCHFNAYGSVIVNASNNELLCSGYNSQLEIGDPTEH 85 Query: 54 AEILAIRMGCRILS---------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 E+ AIR + + EI P+ +Y T EPC MC + I + +R+ YG S+ Sbjct: 86 GEVNAIRNCVKKYTELGWTPAQITEIWPQSWIYTTAEPCPMCGSTILQSGFKRVVYGTSS 145 Query: 105 PKGGGIE 111 P G+ Sbjct: 146 PDLVGMG 152 >gi|156742645|ref|YP_001432774.1| CMP/dCMP deaminase [Roseiflexus castenholzii DSM 13941] gi|156233973|gb|ABU58756.1| CMP/dCMP deaminase zinc-binding [Roseiflexus castenholzii DSM 13941] Length = 190 Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 50/150 (33%), Gaps = 11/150 (7%) Query: 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAI 59 M ++ A+ + P A + ++S N L + HAE++A+ Sbjct: 28 SDEDRMRFVIDLARTNIAQGTGGPFAAAVFRSDDGVLVSAGVNSVTRLTNAVLHAEVVAL 87 Query: 60 RMGCRILSQEILPE----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN--G 113 + L DL + EPC MC AI + ++RL GA+ I G Sbjct: 88 MFAQARVGAYTLRAANTSYDLVTSCEPCAMCLGAILWSGVQRLVCGATRDDAERIGFDEG 147 Query: 114 TQFYTLATCHHS--PEIYPGISEQRSRQII 141 F + + + ++ Sbjct: 148 PVFPESYAYLERRGITVVRQVLRAEAANVL 177 >gi|311107007|ref|YP_003979860.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Achromobacter xylosoxidans A8] gi|310761696|gb|ADP17145.1| cytidine and deoxycytidylate deaminase zinc-binding region family protein [Achromobacter xylosoxidans A8] Length = 164 Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 2/103 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 + ++ +E A+ A + P G+V V +++ N D T H E R Sbjct: 4 ETDKKHLARCVELAKQALDAGDEPFGSVLVSPSGEVLFEDHNH-ASSGDRTRHPEFEIAR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + +Y + E C+MCA+A + R+ Y S Sbjct: 63 WAANNVPAAERAACTVYTSGEHCSMCASAHGWVGLGRIVYACS 105 >gi|170767910|ref|ZP_02902363.1| riboflavin biosynthesis protein RibD [Escherichia albertii TW07627] gi|170123398|gb|EDS92329.1| riboflavin biosynthesis protein RibD [Escherichia albertii TW07627] Length = 361 Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 57/150 (38%), Gaps = 21/150 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+ AQ + P VG V V + +I+ + HAE+ A+RM Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGDGYHHRAGE----PHAEVHALRMA--- 53 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +E YVTLEPC C A+ A + R+ +P G Sbjct: 54 --EEKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQ 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G+ + Q+ + F K R Sbjct: 112 AG----IDVSHGLMMSEAEQLNKGFLKRMR 137 >gi|92117361|ref|YP_577090.1| riboflavin biosynthesis protein RibD [Nitrobacter hamburgensis X14] gi|91800255|gb|ABE62630.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Nitrobacter hamburgensis X14] Length = 383 Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 42/118 (35%), Gaps = 17/118 (14%) Query: 4 GNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL + A VGAV V ++ I+ R + HAE A+R Sbjct: 21 DLRFMQLALALGRRSLGASAPNPAVGAVIVKDDVIVGRGWTQPGGR----PHAEAEALRR 76 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 LYVTLEPC CA A+ A I R+ +P G Sbjct: 77 AGEAA-----RGATLYVTLEPCSHVGKTPPCADAVIAAGITRVVSAIEDPTPEVAGQG 129 >gi|325129557|gb|EGC52381.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis OX99.30304] Length = 369 Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M AL A + P VG V ++I+ + + HAE+ A+ Sbjct: 4 DTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + +VTLEPC CA A+ + + R+ +P G Sbjct: 60 RQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 115 LALLESAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149 >gi|119509555|ref|ZP_01628702.1| Riboflavin biosynthesis protein RibD [Nodularia spumigena CCY9414] gi|119465744|gb|EAW46634.1| Riboflavin biosynthesis protein RibD [Nodularia spumigena CCY9414] Length = 448 Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 47/122 (38%), Gaps = 19/122 (15%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M L A+ A R P VGAV V + +I+ + HAE+ A++ Sbjct: 82 DQAMMQRCLALARRALGRTSPNPLVGAVVVKDGEIVGEGFHPCAGE----PHAEVFALKA 137 Query: 62 G---CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK----GG 108 + +YV LEPC C+ A+ A + ++ G +P GG Sbjct: 138 AGVGADSTQENRACGATVYVNLEPCNHHGRTPPCSEALIAAGVAKVVVGIVDPNPLVGGG 197 Query: 109 GI 110 GI Sbjct: 198 GI 199 >gi|238787980|ref|ZP_04631776.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia frederiksenii ATCC 33641] gi|238723928|gb|EEQ15572.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia frederiksenii ATCC 33641] Length = 369 Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 55/157 (35%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ +M+ A E A+ + P VG V V + +I+ + HAE+ A Sbjct: 1 MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM YVTLEPC CA A+ A + R+ +P Sbjct: 57 LRMAGEKA-----RGATAYVTLEPCSHHGRTPPCADALVAAGVVRVVAAMQDPNPQVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A + G+ + + F K R Sbjct: 112 GLYKLKQAG----IAVDHGLMLAEAEAVNLGFLKRMR 144 >gi|302533295|ref|ZP_07285637.1| riboflavin biosynthesis protein RibD [Streptomyces sp. C] gi|302442190|gb|EFL14006.1| riboflavin biosynthesis protein RibD [Streptomyces sp. C] Length = 376 Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 45/142 (31%), Gaps = 25/142 (17%) Query: 8 MSCALEEAQNAA---LRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+E A N + VG V ++ + HAE+ A+R Sbjct: 23 MRRAIELASRGLGSTSPNPV-VGCVITDPAGAVVGEGWHERAGG----PHAEVHALRAAG 77 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 YVTLEPC CA A+ A I R+ Y S+P G Sbjct: 78 EAA-----RGGTAYVTLEPCNHTGRTGPCAQALVDAGIARVVYAVSDPNPQASGGGATLR 132 Query: 118 TLATCHHSPEIYPGISEQRSRQ 139 + G+ + Q Sbjct: 133 AA-----GIDTEAGLLADEAEQ 149 >gi|316984420|gb|EFV63393.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis H44/76] gi|325200879|gb|ADY96334.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis H44/76] Length = 361 Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 24/153 (15%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A + P VG V ++I+ + + HAE+ A+R + Sbjct: 2 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHALRQAGEM 57 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +VTLEPC CA A+ A + R+ +P G Sbjct: 58 AQ-----GATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKGLALLEA 112 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 113 AGI--KTEC--GLLEHQARELNRGFLSRIERRR 141 >gi|93006874|ref|YP_581311.1| CMP/dCMP deaminase, zinc-binding [Psychrobacter cryohalolentis K5] gi|92394552|gb|ABE75827.1| CMP/dCMP deaminase, zinc-binding [Psychrobacter cryohalolentis K5] Length = 165 Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 2/99 (2%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + ++E A A + P G+V V + +++ NR + D T H EI ++ Sbjct: 10 DDMIHLRRSIELATEALEAGDEPFGSVLVAGDGQVLHEDRNRANSV-DATYHPEIAVVQW 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + ++ E + +Y + E C MC+AA + + + R+ Y Sbjct: 69 AAKHMTAEARAQAVVYTSGEHCAMCSAAHAWSGLGRIVY 107 >gi|325201538|gb|ADY96992.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis M01-240149] Length = 369 Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 58/159 (36%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL+ A + P VG V ++I+ + + HAE+ A+ Sbjct: 4 ETDISMMQNALKLAALGRFSTSPNPRVGCVIAQGSQIVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + +VTLEPC CA A+ + + R+ +P G Sbjct: 60 RQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 115 LALLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149 >gi|321254949|ref|XP_003193256.1| hypothetical protein CGB_D0460W [Cryptococcus gattii WM276] gi|317459726|gb|ADV21469.1| Hypothetical Protein CGB_D0460W [Cryptococcus gattii WM276] Length = 224 Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 26/121 (21%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP------VGAVAV--LNNKIISRAGNRNRELKDVTAH 53 + +M ++E +P G+V V NN+++ N E+ D T H Sbjct: 35 EVDLHWMRKSIEV---------MPPCHFNAYGSVIVNASNNELLCSGYNSQLEIGDPTEH 85 Query: 54 AEILAIRMGCRILS---------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 EI AIR + + EI P+ +Y T EPC MC + I + +R+ YG S+ Sbjct: 86 GEINAIRNCVKKYTELGWTPAQITEIWPQSWIYTTAEPCPMCGSTILQSGFKRVVYGTSS 145 Query: 105 P 105 P Sbjct: 146 P 146 >gi|89074668|ref|ZP_01161133.1| Putative riboflavin biosynthesis protein RibD [Photobacterium sp. SKA34] gi|89049606|gb|EAR55166.1| Putative riboflavin biosynthesis protein RibD [Photobacterium sp. SKA34] Length = 146 Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 49/142 (34%), Gaps = 21/142 (14%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM AL + + R PVG V V N +I+S + HAE +A+ Sbjct: 6 QEQAFMIRALLLSHQSLPDCRPNPPVGCVLVKNGEIMSEGFTQPPGQY----HAEAMAL- 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 +V YVTLEPC CA I+++ +P G Sbjct: 61 --ANYHGS--FTDVTAYVTLEPCSFVGRTPSCAHTFVELGIKKVVVATLDPDSRNSGKGI 116 Query: 115 QFYTLATCHHSPEIYPGISEQR 136 A E+ G+ E Sbjct: 117 AILKEAG----VEVEVGLCENE 134 >gi|299530728|ref|ZP_07044143.1| riboflavin biosynthesis protein RibD [Comamonas testosteroni S44] gi|298721244|gb|EFI62186.1| riboflavin biosynthesis protein RibD [Comamonas testosteroni S44] Length = 362 Score = 85.3 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 59/149 (39%), Gaps = 19/149 (12%) Query: 8 MSCALEEAQNAA--LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M+ ALE+A A VG V V +++II + ++ HAE++A+R Sbjct: 1 MNKALEQAAQALFLSSPNPRVGCVIVDASDRIIGQGF--TQQAGGP--HAEVMALRDASA 56 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + YVTLEPC+ C A+ A I ++ ++P G + Sbjct: 57 KGNDVR--GATAYVTLEPCSHHGRTGPCCDALIAAGIGKVVGALTDPNPQVAGQGFERLR 114 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A ++ G SR++ FF Sbjct: 115 AAG----VDVEIGPGGAESRELNIGFFSR 139 >gi|58261492|ref|XP_568156.1| hypothetical protein CNL06320 [Cryptococcus neoformans var. neoformans JEC21] gi|57230238|gb|AAW46639.1| hypothetical protein CNL06320 [Cryptococcus neoformans var. neoformans JEC21] Length = 209 Score = 85.3 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 23/113 (20%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP------VGAVAV--LNNKIISRAGNRNRELKDVTAH 53 + +M ++E +P G+V V NN+++ N E+ D T H Sbjct: 35 EVDLHWMRKSIEV---------MPPCHFNAYGSVIVNASNNELLCSGYNSQLEIGDPTEH 85 Query: 54 AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 E+ AIR EI P+ +Y T EPC MC + I + +R+ YG S+P Sbjct: 86 GEVNAIR------ITEIWPQSWIYTTAEPCPMCGSTILQSGFKRVVYGTSSPD 132 >gi|185535483|gb|ACC77864.1| riboflavin biosynthesis protein [Staphylococcus xylosus] Length = 347 Score = 85.3 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 61/149 (40%), Gaps = 24/149 (16%) Query: 5 NVFMSCALEEAQNAALRNE--IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +++ A++ A+ + PVG+V V + +I+ + + K HAE+ A+ M Sbjct: 2 SHYLNYAIQLAKMVEGQTGLNPPVGSVVVNDGRIVGMGAHLQKGGK----HAEVQALDMA 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 Q+ +Y++LEPC C I A I+++ Y + G Sbjct: 58 -----QDNARGGTIYISLEPCTHYGSTPPCVNKIIEAGIKKVVYAVKDTTL--PSEGDDI 110 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ S+ + + +DFF Sbjct: 111 LEQAG----IEVIFR-SQSDAESLYRDFF 134 >gi|254424276|ref|ZP_05037994.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Synechococcus sp. PCC 7335] gi|196191765|gb|EDX86729.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Synechococcus sp. PCC 7335] Length = 179 Score = 85.3 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 32/99 (32%), Positives = 42/99 (42%), Gaps = 7/99 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A A A P GA+ V + ++ GN D HAE + +R Sbjct: 30 LRYANTIAMRAQQFGHHPFGAILVAPDDQTVLMAQGNV-----DTVNHAESVLLRTAVTN 84 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 S + L LY T+EPC MCAA A + RL YG S Sbjct: 85 FSAKYLWNCTLYTTVEPCAMCAATQYWANVGRLVYGLSE 123 >gi|77164717|ref|YP_343242.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Nitrosococcus oceani ATCC 19707] gi|254434141|ref|ZP_05047649.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Nitrosococcus oceani AFC27] gi|76883031|gb|ABA57712.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nitrosococcus oceani ATCC 19707] gi|207090474|gb|EDZ67745.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Nitrosococcus oceani AFC27] Length = 153 Score = 85.3 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 2/94 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + +E A A + P G+V V + +++ NR D T H E R + Sbjct: 4 LRRCVELATKALESGDEPFGSVLVAADGEVLFEDRNRV-ASGDRTRHPEFEIARWAATNM 62 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + E +Y + E C MCAAA + R+ Y Sbjct: 63 TPEARVAATVYTSGEHCPMCAAAHGWVGLGRIVY 96 >gi|319639397|ref|ZP_07994147.1| riboflavin biosynthesis protein RibD [Neisseria mucosa C102] gi|317399292|gb|EFV79963.1| riboflavin biosynthesis protein RibD [Neisseria mucosa C102] Length = 367 Score = 85.3 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M ALE A+ + P VG V +I+ + + + + HAE+ A+R Sbjct: 6 DTQMMQTALELAKLGRFSTSPNPRVGCVIAHGAQIVGQGFH--VKAGEP--HAEVHALRQ 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC CA A+ + + R+ ++P G Sbjct: 62 AQAAAKGAT-----AYVTLEPCSHYGRTPPCAEALIHSGVARVVASMTDPNPLVAGKGLS 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E G+ E ++R++ + F Sbjct: 117 MLEAAGI--RTE--SGLLEAQARELNRGF 141 >gi|78776878|ref|YP_393193.1| riboflavin biosynthesis protein RibD [Sulfurimonas denitrificans DSM 1251] gi|78497418|gb|ABB43958.1| Riboflavin biosynthesis protein RibD [Sulfurimonas denitrificans DSM 1251] Length = 336 Score = 85.3 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 65/185 (35%), Gaps = 50/185 (27%) Query: 3 KGNVFMSCALEEAQN--AALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 N +M AL EA VG V + + +I++ ++ L HAE+ A+ Sbjct: 4 DENFYMRLALNEAWKYQGLTYPNPAVGCVIISKSGEILALEAHKRAGL----PHAEVEAL 59 Query: 60 RMGCRIL----------------------SQEILPEVDLYVTLEPC------TMCAAAIS 91 + +L + + +Y TLEPC CA IS Sbjct: 60 KSAYIVLSGDKKILELTESAQIHNYLLENHNDYFKDATIYTTLEPCSHIGKTPSCATLIS 119 Query: 92 LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII-------QD- 143 I++L G+ + G + A EI G+ ++ +++ +D Sbjct: 120 KLNIKKLIVGSLDSNEIASG-GNKVVNDAG----VEIKYGVMQKECDELLLPFWLWQKDK 174 Query: 144 --FFK 146 FFK Sbjct: 175 FVFFK 179 >gi|299138351|ref|ZP_07031530.1| riboflavin biosynthesis protein RibD [Acidobacterium sp. MP5ACTX8] gi|298599597|gb|EFI55756.1| riboflavin biosynthesis protein RibD [Acidobacterium sp. MP5ACTX8] Length = 387 Score = 85.3 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 55/154 (35%), Gaps = 24/154 (15%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + AL+ AQ A L + P VG V V + ++ + D HAEI A++ Sbjct: 7 DERHLQRALDLAQEAVGLASPNPTVGCVLVRDGVVLGEGAHH----YDERDHAEIAALKQ 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC+ CA A+ A I R +P G Sbjct: 63 AASLGHTP--QGATAYVTLEPCSHQGRTGPCADALIAAGIARCVVATVDPNPLVSGGGLA 120 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ + + + Q + RR Sbjct: 121 KLQAAG----IEV---VVADPASALAQ---RTRR 144 >gi|297154385|gb|ADI04097.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Streptomyces bingchenggensis BCW-1] Length = 158 Score = 85.3 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 52/151 (34%), Gaps = 11/151 (7%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + +E A A + P G+V V + ++ N D T H E R Sbjct: 6 DLRHLRRCVELAAEALEAGDEPFGSVLVAADGAVLFEDHNHV-AGGDHTRHPEFEIARWA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA-T 121 L+ E +Y + E C MCAAA + R+ Y +S+ + Sbjct: 65 AAHLTPEERAAATVYTSGEHCPMCAAAHGWVGLGRIVYASSSGQLTAWLTDLGVPAPPVR 124 Query: 122 CHHSPEIYPG--------ISEQRSRQIIQDF 144 E+ PG + +R ++ + F Sbjct: 125 ALPIQEVIPGAVVEGPFPVLAERVHELHRRF 155 >gi|119716673|ref|YP_923638.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Nocardioides sp. JS614] gi|119537334|gb|ABL81951.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Nocardioides sp. JS614] Length = 345 Score = 85.3 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 50/148 (33%), Gaps = 24/148 (16%) Query: 8 MSCALEEAQN-AALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M ALE A P VG V + + + ++ +R TAHAE A+ Sbjct: 1 MRRALELAAAPGVPLGPNPRVGCVLLDEDGRTVAEGHHR----GAGTAHAEADALARAG- 55 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 VTLEPC CA A+ A +RR+ + +P Sbjct: 56 ----VRARGATAVVTLEPCNHTGRTGPCAQALIGAGVRRVVFAQPDPNPAAAGGADTLRA 111 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146 ++ G+ S ++ F+ Sbjct: 112 A-----GVDVESGLLHVESG-LLNRFWA 133 >gi|225709398|gb|ACO10545.1| tRNA-specific adenosine deaminase-like protein 3 [Caligus rogercresseyi] Length = 257 Score = 85.3 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 52/105 (49%), Gaps = 5/105 (4%) Query: 28 AVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL-PEVDLYVTLEPCT 84 A+ V + I++ + + H + AI R E L +D+Y+ EPC Sbjct: 147 AIIVDPARDSIVALGHDGRPDF--PLKHPVMNAIEELSRKKESEYLASGLDIYLKNEPCA 204 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 MC+ A+ RI+R+++ +P+ G +++ + +TL +H +++ Sbjct: 205 MCSMALVHMRIKRIFFIQDSPQCGALKSRMKLHTLPGINHVFQVF 249 >gi|160872316|ref|ZP_02062448.1| riboflavin biosynthesis protein RibD [Rickettsiella grylli] gi|159121115|gb|EDP46453.1| riboflavin biosynthesis protein RibD [Rickettsiella grylli] Length = 360 Score = 85.3 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 17/126 (13%) Query: 6 VFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 ++ AL A + VGA+ V +N +I++ + HAE+ AI Sbjct: 7 QYLELALSLAEIRRGFCSPNPCVGAILVKDNTVIAKGYHH----ASGLPHAEVEAI---- 58 Query: 64 RILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + ++ + LYVTL+PC C I + I ++ YG +P + Sbjct: 59 QSVNPVHVKGATLYVTLQPCCHSAKKTPPCTDLIIKSGIVKVIYGFQDPNPAVSHHTDNL 118 Query: 117 YTLATC 122 A Sbjct: 119 LKHAGI 124 >gi|257055207|ref|YP_003133039.1| cytosine/adenosine deaminase [Saccharomonospora viridis DSM 43017] gi|256585079|gb|ACU96212.1| cytosine/adenosine deaminase [Saccharomonospora viridis DSM 43017] Length = 163 Score = 85.3 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 9/136 (6%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAIR 60 ++ ++ +E A A + P G+V V ++ + NR D T H E R Sbjct: 4 ERELPYLRRCVELASEALEAGDEPFGSVLVDAEGVVRAEDRNR-IAGGDRTRHPEFELAR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L+ E +Y + E C MCAAA + R+ Y AS+ + + + + Sbjct: 63 WSTTALTPEERRGATVYTSGEHCPMCAAAHGWVGLGRIVYVASSAQ---LSSWLEELGAP 119 Query: 121 TCHHSP----EIYPGI 132 P EI PG+ Sbjct: 120 APPVRPLPAEEITPGV 135 >gi|218962081|ref|YP_001741856.1| riboflavin biosynthesis protein RibD [Candidatus Cloacamonas acidaminovorans] gi|167730738|emb|CAO81650.1| riboflavin biosynthesis protein RibD [Candidatus Cloacamonas acidaminovorans] Length = 368 Score = 85.0 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 21/145 (14%) Query: 6 VFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A++ A+ A + P VG+V V NN++IS L+ + H+EI Sbjct: 8 QYMQRAIKVAEKARGKCSPNPFVGSVIVKNNQVISEGW----TLEYGSDHSEIQ-----A 58 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + + L+VTLEPC CA AI A I+ +Y G +P G Sbjct: 59 LKKAGKKAKDATLFVTLEPCSHYGKTPPCAQAIIDAGIKEVYIGIYDPNPLVKGKGIAML 118 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQ 142 A +++ G E++ R ++ Sbjct: 119 KEAG----IDVHYGFLEEKIRTQLE 139 >gi|114319537|ref|YP_741220.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Alkalilimnicola ehrlichii MLHE-1] gi|114225931|gb|ABI55730.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Alkalilimnicola ehrlichii MLHE-1] Length = 369 Score = 85.0 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 23/155 (14%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 N+FM AL A+ + P VG V V + I+ + HAE +A+ Sbjct: 8 DNLFMGRALRLARR-PQQPPHPNPAVGCVLVRDGLIVGEGWHERAGE----PHAEAMALH 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E YVTLEPC C+ A+ A + R+ ++P G Sbjct: 63 RAG-----EQASGATAYVTLEPCSHHGRTPPCSEALLAAGVVRVVAAMTDPNPQVAGRGL 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + A E+ G+ +++ + F + R Sbjct: 118 RRLRAAGL----EVATGLMAEQAAALNPGFTQRMR 148 >gi|114330216|ref|YP_746438.1| CMP/dCMP deaminase, zinc-binding [Nitrosomonas eutropha C91] gi|114307230|gb|ABI58473.1| CMP/dCMP deaminase, zinc-binding protein [Nitrosomonas eutropha C91] Length = 195 Score = 85.0 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 MS LE + + P A + +I+ NR TAHAEILA+ + Sbjct: 32 MSYVLELMRINMATDGGPFAAAVFERDSGLLIAAGTNRVVSSHCSTAHAEILALSLAQAK 91 Query: 66 LSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 L L P +L + EPC MC A+ + +R L A I Sbjct: 92 LGSHDLSADGLPACELVTSAEPCVMCFGAVIWSGVRSLVCAARGEDVEAIGF 143 >gi|307293539|ref|ZP_07573383.1| riboflavin biosynthesis protein RibD [Sphingobium chlorophenolicum L-1] gi|306879690|gb|EFN10907.1| riboflavin biosynthesis protein RibD [Sphingobium chlorophenolicum L-1] Length = 317 Score = 85.0 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 49/147 (33%), Gaps = 24/147 (16%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M+ A+ ++ P VG + V ++ R K HAE A+ Sbjct: 1 MAAAIALSERGRGL-STPNPNVGCLIVKEGHVVGRGW----TQKGGRPHAEAQALDEAM- 54 Query: 65 ILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 E YVTLEPC CA ++ A +RR+ +P G + Sbjct: 55 ----ERARGATAYVTLEPCFHLSSRGPRCADLMARAGVRRVVIALRDPDPRTDGQGADWL 110 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 + G+ Q + ++ F Sbjct: 111 RQRG----IAVDMGLMAQEAAAAMRGF 133 >gi|254480859|ref|ZP_05094105.1| riboflavin biosynthesis protein RibD [marine gamma proteobacterium HTCC2148] gi|214038654|gb|EEB79315.1| riboflavin biosynthesis protein RibD [marine gamma proteobacterium HTCC2148] Length = 371 Score = 85.0 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 54/148 (36%), Gaps = 22/148 (14%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL+ A+ P VG V + +I + HAE+ A+ Sbjct: 10 MARALQLARRGQYSCMPNPHVGCVLERDGAVIGEGFTQPAGGN----HAEVQALAEAGDA 65 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC+ CA A+ A + R++ +P NG Sbjct: 66 ------SGATAYVTLEPCSHIGKTGPCADALITAGVSRVFAAIEDPNPLVAGNGLDKLRA 119 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ E +R++I F Sbjct: 120 AG----IEVEVGLLEADARKVIPGFISR 143 >gi|332286796|ref|YP_004418707.1| putative riboflavin-specific deaminase [Pusillimonas sp. T7-7] gi|330430749|gb|AEC22083.1| putative riboflavin-specific deaminase [Pusillimonas sp. T7-7] Length = 374 Score = 85.0 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 49/150 (32%), Gaps = 18/150 (12%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL A++ V + V + ++++ R+ HAEI+A+R Sbjct: 2 SDEGWMRQALHLAESVLYITAPNPRVACLIVRDGRLLAEG--ATRQAGGP--HAEIVALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 +YVTLEPC C A+ AR R+ +P G Sbjct: 58 QAAERGIDT--AGATVYVTLEPCSHYGRTPPCVDALIAARPARVVIAMGDPNPLVHGQGI 115 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + I + + I F Sbjct: 116 AKLRATG----IAVTTDICTEEALAINPGF 141 >gi|163738649|ref|ZP_02146063.1| riboflavin biosynthesis protein RibD [Phaeobacter gallaeciensis BS107] gi|161387977|gb|EDQ12332.1| riboflavin biosynthesis protein RibD [Phaeobacter gallaeciensis BS107] Length = 358 Score = 85.0 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 48/146 (32%), Gaps = 21/146 (14%) Query: 8 MSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 MS AL + VG V V + +I+ R + HAE A++ + Sbjct: 1 MSLALSLGRRGQGNCWPNPAVGCVIVRDGRIVGRGWTQPGGR----PHAEPQALQQAGDL 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +YV+LEPC CA A+ A + R+ + +G Sbjct: 57 A-----RGATVYVSLEPCSHTGKTPPCAQALINAGVARVVAAIEDSDPRVSGHGFAMLRD 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145 A + G+ + FF Sbjct: 112 AGIP----VTTGVCSDAAAWDHAGFF 133 >gi|194364457|ref|YP_002027067.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia R551-3] gi|194347261|gb|ACF50384.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia R551-3] Length = 186 Score = 85.0 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 17/149 (11%) Query: 10 CALEEAQNAALRN-EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A+E ++ P GAV +K+I+ NR AHAE +A + + L Sbjct: 33 LAIELSRLNVEHASGGPFGAVVFGPEDKVIAAGVNRVMPHSTSLAHAENMAYMLAQQRLQ 92 Query: 68 QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA--- 120 L V L + +PC C A A I RL GA++ +E T F Sbjct: 93 TPRLNAVLSPVTLATSSQPCCQCYGATVWAGIDRLLIGANSAD---VEELTPFDEGPLPA 149 Query: 121 ----TCHHS-PEIYPGISEQRSRQIIQDF 144 + E+ G++ +R +++ + Sbjct: 150 DWVGELNKRGIEVVQGLNRDAARSVLRAY 178 >gi|328881089|emb|CCA54328.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase or 5-amino-6-(5-phosphoribosylamino)uracil reductase [Streptomyces venezuelae ATCC 10712] Length = 417 Score = 84.6 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 48/142 (33%), Gaps = 25/142 (17%) Query: 8 MSCALEEAQN---AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+E A A N + VG V + + + ++ HAE+ A+R Sbjct: 70 MRRAVELAARGLGATSPNPV-VGCVVTDASGRPVGEGWHQRAGG----PHAEVHALREAG 124 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + YVTLEPC CA A+ A I R+ Y +P Sbjct: 125 ALA-----RGGTAYVTLEPCNHTGRTGPCAQALIEAGISRVVYAVGDPNPQATGGADTLR 179 Query: 118 TLATCHHSPEIYPGISEQRSRQ 139 ++ G+ E + Sbjct: 180 AA-----GVDVRQGLLEDEAEA 196 >gi|215430296|ref|ZP_03428215.1| putative bifunctional riboflavin biosynthesis protein RIBG: diaminohydroxyphosphoribosylaminopyrimidine deaminase + [Mycobacterium tuberculosis EAS054] gi|289753491|ref|ZP_06512869.1| riboflavin-specific deaminase [Mycobacterium tuberculosis EAS054] gi|289694078|gb|EFD61507.1| riboflavin-specific deaminase [Mycobacterium tuberculosis EAS054] Length = 339 Score = 84.6 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 24/152 (15%) Query: 8 MSCALEEAQ--NAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A+E + PVGAV V N +I+ G HAE++A+R Sbjct: 13 MGLAIEHSYQVKGTTYPNPPVGAVIVDPNGRIVGAGGTEPAGGD----HAEVVALRRAGG 68 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + + VT+EPC C A+ AR+ + Y ++P G G + Sbjct: 69 LA-----TGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPN-GIAGGGAGRLS 122 Query: 119 LATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149 A ++ G+ ++ + ++++ ++R Sbjct: 123 AAGL----QVRSGVLAEQVAAGPLREWLHKQR 150 >gi|325204773|gb|ADZ00227.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis M01-240355] Length = 361 Score = 84.6 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 24/153 (15%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A + P VG V ++I+ + + HAE+ A+R + Sbjct: 2 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHALRQAGEM 57 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +VTLEPC CA A+ + + R+ +P G Sbjct: 58 AQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLALLEA 112 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 113 AGI--KTEC--GLLEHQARELNRGFLSRIERRR 141 >gi|299142759|ref|ZP_07035888.1| riboflavin biosynthesis protein RibD [Prevotella oris C735] gi|298575788|gb|EFI47665.1| riboflavin biosynthesis protein RibD [Prevotella oris C735] Length = 116 Score = 84.6 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 13/120 (10%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M L+ A+N VGAV V +++II + HAE+ A Sbjct: 2 EHEYYMKRCLQLAENGRQNAKLNPMVGAVIVAHDRIIGEGYHVRCGEG----HAEVNAF- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 R +++LPE +YV+LEPC CA I I+R G +P G Sbjct: 57 ASVRPEDEKLLPEATIYVSLEPCSHYGKTPPCADLIISKGIKRCVCGCVDPFAKVQGRGI 116 >gi|169630540|ref|YP_001704189.1| putative cytidine/deoxycytidylate deaminase [Mycobacterium abscessus ATCC 19977] gi|169242507|emb|CAM63535.1| Putative cytidine/deoxycytidylate deaminase [Mycobacterium abscessus] Length = 158 Score = 84.6 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 2/103 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +E A A + P G++ + +++ NR D T H E R Sbjct: 3 DNDIQHLRRCVELATEALDAGDEPFGSLLTGPDGAVLAEDRNRV-GAGDPTRHPEFELAR 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 R LS +Y + E C MC+AA + + R+ Y +S Sbjct: 62 WSVRNLSPTDRALSTVYTSGEHCPMCSAAHAWVGLGRIVYASS 104 >gi|156055462|ref|XP_001593655.1| hypothetical protein SS1G_05083 [Sclerotinia sclerotiorum 1980] gi|154702867|gb|EDO02606.1| hypothetical protein SS1G_05083 [Sclerotinia sclerotiorum 1980 UF-70] Length = 188 Score = 84.6 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 5/121 (4%) Query: 12 LEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 LE + A + + P AV + +N+ + + + D HAE R+ +E Sbjct: 39 LEVQRRAVTQGKRPFAAVLLGPDNETVLLSH----QSIDQVNHAESSLARLAYSHYKKEY 94 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130 L L T EPC MC+A I A I R+ Y A+N + G+ H+ +I Sbjct: 95 LWRCTLISTWEPCAMCSATIYWAHIGRIVYAATNEQLAGLTGPGNRENFTLKWHTRDILE 154 Query: 131 G 131 G Sbjct: 155 G 155 >gi|78221462|ref|YP_383209.1| CMP/dCMP deaminase, zinc-binding protein [Geobacter metallireducens GS-15] gi|78192717|gb|ABB30484.1| CMP/dCMP deaminase, zinc-binding protein [Geobacter metallireducens GS-15] Length = 186 Score = 84.6 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 61/151 (40%), Gaps = 11/151 (7%) Query: 8 MSCALEEAQNAALRN-EIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M+ A+ A++ P GA + +++S N + HAE++AI Sbjct: 29 MAFAISLARSNVEEGTGGPFGAAIFNRESGELVSVGVNLVVAGMNSVLHAEMVAIMAAEA 88 Query: 65 ILSQEILP---EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG-TQFYTLA 120 +L L +L+ + EPC MC I + + RL A+ I Y + Sbjct: 89 VLGTYTLAVRGRFELFSSCEPCAMCLGGILWSGVERLVCAAAADDARAIGFDEGPVYPES 148 Query: 121 TCH---HSPEIYPGISEQRSRQIIQDFFKER 148 C+ EI G + ++++ + ++ER Sbjct: 149 YCYLKERGIEIERGFMREEGKRVL-ELYRER 178 >gi|254804368|ref|YP_003082589.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / phosphoribosylamino uracil reductase [Neisseria meningitidis alpha14] gi|254667910|emb|CBA04065.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / phosphoribosylamino uracil reductase [Neisseria meningitidis alpha14] Length = 369 Score = 84.6 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 55/159 (34%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M AL A + P VG V ++++ + + HAE+ A+ Sbjct: 4 DTDISMMETALRLAALGRFSTSPNPRVGCVIAHGSQVVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + +VTLEPC CA A+ A + R+ +P G Sbjct: 60 HQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 115 LALLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149 >gi|330792481|ref|XP_003284317.1| hypothetical protein DICPUDRAFT_86189 [Dictyostelium purpureum] gi|325085770|gb|EGC39171.1| hypothetical protein DICPUDRAFT_86189 [Dictyostelium purpureum] Length = 222 Score = 84.6 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 47/146 (32%), Gaps = 20/146 (13%) Query: 4 GNVFMSCALE--EAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 M ++ +A+NA G+ V N + N + + D T H E++ + Sbjct: 53 HETKMQELIDYTKAKNAW------FGSSIVHKNGTTVCYGVNESHQYNDPTLHGEMVVMH 106 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 ++ LY T E C MC +A + + Y S + Q + Sbjct: 107 NCSKLFGITNYSNYTLYTTGESCPMCQSAAMWNKFSTIVYATSIETMYCDKCLGQILIDS 166 Query: 121 TC-----------HHSPEIYPGISEQ 135 + P I GI E Sbjct: 167 NFLAAFGNGLQNGYVPPVIIGGILED 192 >gi|330797600|ref|XP_003286847.1| hypothetical protein DICPUDRAFT_77728 [Dictyostelium purpureum] gi|325083149|gb|EGC36609.1| hypothetical protein DICPUDRAFT_77728 [Dictyostelium purpureum] Length = 476 Score = 84.6 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 Q + LY+T EPC MC+ A+ +RI+R+ YG+S GG+ + + +T + +H Sbjct: 397 GQYLANGYHLYLTREPCVMCSMALVHSRIKRVVYGSSGID-GGLGSYLKIHTEKSLNHRF 455 Query: 127 EIYPGISEQRSRQI 140 E+Y + I Sbjct: 456 EVYKDFMKDECDSI 469 Score = 41.0 bits (96), Expect = 0.048, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 5/39 (12%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKII 37 M+ M ALE+A+ A R P+GAV V NK++ Sbjct: 280 MRTH---MMSALEQAKIAKTRGHKPIGAVLVDPETNKVV 315 >gi|296105681|ref|YP_003617381.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila 2300/99 Alcoy] gi|295647582|gb|ADG23429.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila 2300/99 Alcoy] Length = 160 Score = 84.6 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 12/142 (8%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ + A P GA+ V ++ +I+ ++ N H E+ I Sbjct: 16 FMTATIAVA---GENPMAPYGAIIVYDDKEILLKSVNS--AHHHPLMHGELSVIHTLFNN 70 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTLATCHH 124 + ++ LY T EPC MCAAAI A I ++ YG+S + Q Sbjct: 71 GFDGDVSKLSLYTTAEPCPMCAAAIYWAMIPKVVYGSSIAFLHDLFGRQIQVGAEEVLSK 130 Query: 125 SPEIY-----PGISEQRSRQII 141 +P+ Y G+ E+ Q+ Sbjct: 131 TPDFYSCRLIGGVMEEECNQLF 152 >gi|123966659|ref|YP_001011740.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus str. MIT 9515] gi|123201025|gb|ABM72633.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus str. MIT 9515] Length = 368 Score = 84.6 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 56/150 (37%), Gaps = 22/150 (14%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+ A N P VGAV + N +IS + K HAE +A Sbjct: 8 DIKWMKRAIYLASLGKGRTNPNPMVGAVILDKNGNLISEGFH----SKSGMPHAEAMAFN 63 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + + LYV LEPC C I I++++ +P G Sbjct: 64 NLKK-----NARDGILYVNLEPCCHHGKTPPCVDKIISFGIKKVFVSIEDPDKRVSGKGI 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + + E++ G+ E+ S ++ + F Sbjct: 119 KLLKDSG----IEVHLGLCEKESTELNKSF 144 >gi|31792603|ref|NP_855096.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Mycobacterium bovis AF2122/97] gi|121637339|ref|YP_977562.1| putative bifunctional riboflavin biosynthesis protein RIBG: diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino) uracil reductase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|215426746|ref|ZP_03424665.1| putative bifunctional riboflavin biosynthesis protein RIBG: diaminohydroxyphosphoribosylaminopyrimidine deaminase + [Mycobacterium tuberculosis T92] gi|224989814|ref|YP_002644501.1| putative riboflavin biosynthesis protein [Mycobacterium bovis BCG str. Tokyo 172] gi|260186348|ref|ZP_05763822.1| putative riboflavin biosynthesis protein [Mycobacterium tuberculosis CPHL_A] gi|260200464|ref|ZP_05767955.1| putative riboflavin biosynthesis protein [Mycobacterium tuberculosis T46] gi|289442854|ref|ZP_06432598.1| riboflavin biosynthesis protein RibD [Mycobacterium tuberculosis T46] gi|289447005|ref|ZP_06436749.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis CPHL_A] gi|289749967|ref|ZP_06509345.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis T92] gi|31618192|emb|CAD94305.1| PROBABLE BIFUNCTIONAL riboflavin biosynthesis protein RIBG : Diaminohydroxyphosphoribosylaminopyrimidine deaminase (Riboflavin-specific deaminase) + 5-amino-6-(5-phosphoribosylamino) uracil reductase (HTP reductase) [Mycobacterium bovis AF2122/97] gi|121492986|emb|CAL71457.1| Probable bifunctional riboflavin biosynthesis protein RIBG : Diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino) uracil reductase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772927|dbj|BAH25733.1| putative riboflavin biosynthesis protein [Mycobacterium bovis BCG str. Tokyo 172] gi|289415773|gb|EFD13013.1| riboflavin biosynthesis protein RibD [Mycobacterium tuberculosis T46] gi|289419963|gb|EFD17164.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis CPHL_A] gi|289690554|gb|EFD57983.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis T92] Length = 339 Score = 84.6 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 24/152 (15%) Query: 8 MSCALEEAQ--NAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A+E + PVGAV V N +I+ G HAE++A+R Sbjct: 13 MGLAIEHSYQVKGTTYPNPPVGAVIVDPNGRIVGAGGTEPAGGD----HAEVVALRRAGG 68 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + + VT+EPC C A+ AR+ + Y ++P G G + Sbjct: 69 LA-----TGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPN-GIAGGGAGRLS 122 Query: 119 LATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149 A ++ G+ ++ + ++++ ++R Sbjct: 123 AAGL----QVRSGVLAEQVAAGPLREWLHKQR 150 >gi|332299428|ref|YP_004441349.1| riboflavin biosynthesis protein RibD [Porphyromonas asaccharolytica DSM 20707] gi|332176491|gb|AEE12181.1| riboflavin biosynthesis protein RibD [Porphyromonas asaccharolytica DSM 20707] Length = 343 Score = 84.6 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++M L+ A A + VG+V V +KII + HAE++A Sbjct: 11 SDQIYMQRCLQLA--ALAQGRTSPNPMVGSVIVYKDKIIGEGYHHYAGA----PHAEVMA 64 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 R L ++ + YV+LEPC CA ++ R R+ +P Sbjct: 65 WRSVPEELRS-VIGKATWYVSLEPCAHYGKTPPCAELLAKLRPARVVIAMLDPFAKVDGR 123 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A E+ G EQ + + + F Sbjct: 124 GVARLREAG----IEVSIGCLEQEAIALNRHF 151 >gi|260204674|ref|ZP_05772165.1| putative riboflavin biosynthesis protein [Mycobacterium tuberculosis K85] gi|289574078|ref|ZP_06454305.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis K85] gi|289538509|gb|EFD43087.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis K85] Length = 339 Score = 84.6 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 24/152 (15%) Query: 8 MSCALEEAQ--NAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A+E + PVGAV V N +I+ G HAE++A+R Sbjct: 13 MGLAIEHSYQVKGTTYPNPPVGAVIVDPNGRIVGAGGTEPAGGD----HAEVVALRRAGG 68 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + + VT+EPC C A+ AR+ + Y ++P G G + Sbjct: 69 LA-----TGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPN-GIAGGGAGRLS 122 Query: 119 LATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149 A ++ G+ ++ + ++++ ++R Sbjct: 123 AAGL----QVRSGVLAEQVAAGPLREWLHKQR 150 >gi|330799923|ref|XP_003287990.1| hypothetical protein DICPUDRAFT_78829 [Dictyostelium purpureum] gi|325082014|gb|EGC35511.1| hypothetical protein DICPUDRAFT_78829 [Dictyostelium purpureum] Length = 234 Score = 84.6 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 52/152 (34%), Gaps = 20/152 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR-- 60 M AL A + R GA + N ++ A N HAEI AI Sbjct: 53 HENNMRIALNLAISVNGR----FGAAIINRNGTLLCTAMN--NGTVSKILHAEINAILNC 106 Query: 61 ---MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP--KGGGIENGTQ 115 M R + Q LYVT EPC MC +A+ ++ + +G G + Sbjct: 107 TDIMAARGIKQSSWEGYYLYVTGEPCPMCTSALIWSKFDAVIFGTYVDTLYCGKCNSQLP 166 Query: 116 FYTL------ATCHHSPEIYPGISEQRSRQII 141 + +I GI E + ++ Sbjct: 167 ITSNYINGFSYGVGSKLKIVGGILESETDKLF 198 >gi|283779657|ref|YP_003370412.1| riboflavin biosynthesis protein RibD [Pirellula staleyi DSM 6068] gi|283438110|gb|ADB16552.1| riboflavin biosynthesis protein RibD [Pirellula staleyi DSM 6068] Length = 373 Score = 84.6 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 54/147 (36%), Gaps = 22/147 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59 FM A+E A+ E P VG V V +++ R + HAE+ A+ Sbjct: 11 SDEAFMREAIELAERGLGLVEPNPMVGCVIVSPRGEVVGRGWHGRFGG----PHAEVEAL 66 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + E LYVTLEPC CA A+ A + R+ ++P G Sbjct: 67 QQAG-----EQARGSTLYVTLEPCSHFGKTPPCADAVIAAGVARVVAAMTDPFPKVQGGG 121 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQI 140 A + G+ E +R + Sbjct: 122 FAKLRSAG----IAVESGVCEAEARAL 144 >gi|126348142|emb|CAJ89863.1| putative cytidine and deoxycytidylate deaminase [Streptomyces ambofaciens ATCC 23877] Length = 164 Score = 84.2 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 11/147 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + +E A A + P G+V + +++ NR D T H E R L Sbjct: 11 LRRCVELAAEALEAGDEPFGSVLAGADGAVLAEDHNRV-ASGDRTRHPEFELARWSAAHL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN-------PKGGGIENGTQFYTL 119 + +Y + E C MCAAA + + R+ Y AS+ + G + + Sbjct: 70 TPAERAAATVYTSGEHCPMCAAAHAWVGLGRIVYVASSQQLGGWLAEFGAAAPPVRPLPV 129 Query: 120 ATCHHSPEIYPGISE--QRSRQIIQDF 144 + + E R + + F Sbjct: 130 HEVAPGVVVEGPVPELCDEIRALHRRF 156 >gi|325133593|gb|EGC56254.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis M13399] Length = 369 Score = 84.2 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 55/159 (34%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M AL A + P VG V ++++ + + HAE+ A+ Sbjct: 4 DTDISMMETALRLAALGRFSTSPNPRVGCVIAHGSQVVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + +VTLEPC CA A+ A + R+ +P G Sbjct: 60 HQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 115 LALLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149 >gi|146157359|gb|ABQ08114.1| hypothetical protein [Tropheryma whipplei] Length = 60 Score = 84.2 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 33/60 (55%) Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 IR ++L L + L+VT+EPCTMCA AI +RI R+ +G N K G + + Sbjct: 1 IRKASQMLKDWRLSGLTLFVTMEPCTMCAGAIVTSRISRVVFGVFNNKTGSVGSRIDILR 60 >gi|163733978|ref|ZP_02141419.1| riboflavin biosynthesis protein ribD [Roseobacter litoralis Och 149] gi|161392514|gb|EDQ16842.1| riboflavin biosynthesis protein ribD [Roseobacter litoralis Och 149] Length = 366 Score = 84.2 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 59/155 (38%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + + +M+ AL + R VG V V ++++ R + HAE Sbjct: 1 MTEASRYMALALSLGRRGLGRVWPNPAVGCVIVKEDRVVGRGWTQPGGR----PHAETQ- 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + D+YVTLEPC CAAA+ A + R++ +P Sbjct: 56 ----ALAQAGAQARGADVYVTLEPCAHHGKTPPCAAALVKAGVARVFAATGDPDPRVHGA 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G + A H + GI E ++R+ FF Sbjct: 112 GFRALEQAGIH----VQSGILEAQARRDNAGFFAR 142 >gi|160900631|ref|YP_001566213.1| riboflavin biosynthesis protein RibD [Delftia acidovorans SPH-1] gi|160366215|gb|ABX37828.1| riboflavin biosynthesis protein RibD [Delftia acidovorans SPH-1] Length = 369 Score = 84.2 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 59/159 (37%), Gaps = 20/159 (12%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEIL 57 M M AL A A VG V V + +++ + ++ HAE++ Sbjct: 1 MTNTVPHMHQALGLAAQALFLSSPNPRVGCVLVAPDGRVVGQGF--TQQAGGP--HAEVM 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 A+R + E + YVTLEPC+ C A+ A + ++ ++P Sbjct: 57 ALRDA--VARGEDVRGATAYVTLEPCSHQGRTGPCCDALIAAGVAKVVGALTDPNPQVAG 114 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF-KERR 149 G A ++ G SR++ FF + R Sbjct: 115 QGFARLRAAG----VDVVVGPGADESRELNIGFFSRMLR 149 >gi|294010277|ref|YP_003543737.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Sphingobium japonicum UT26S] gi|292673607|dbj|BAI95125.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Sphingobium japonicum UT26S] Length = 317 Score = 84.2 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 50/147 (34%), Gaps = 24/147 (16%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M+ A+ +Q P VG + V + ++ R + HAE A+ Sbjct: 1 MAAAIALSQRGRGL-STPNPNVGCLIVKDGHVVGRGWTQRGGR----PHAEAQALDEAL- 54 Query: 65 ILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + YVTLEPC CA ++ A +RR+ +P G + Sbjct: 55 ----DRARGATAYVTLEPCFHLSPRGPRCADRMARAGVRRVVIALRDPDPRTDGQGAAWL 110 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 H + G+ + ++ F Sbjct: 111 RQ----HGVAVDMGLMAGEAAAAMRGF 133 >gi|148358330|ref|YP_001249537.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila str. Corby] gi|148280103|gb|ABQ54191.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila str. Corby] Length = 153 Score = 84.2 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 12/142 (8%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 FM+ + A P GA+ V ++ +I+ ++ N H E+ I Sbjct: 9 FMTATIAVA---GENPMAPYGAIIVYDDKEILLKSVNS--AHHHPLMHGELSVIHTLFNN 63 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTLATCHH 124 + ++ LY T EPC MCAAAI A I ++ YG+S + Q Sbjct: 64 GFDGDVSKLSLYTTAEPCPMCAAAIYWAMIPKVVYGSSIAFLHDLFGRQIQVGAEEVLSK 123 Query: 125 SPEIY-----PGISEQRSRQII 141 +P+ Y G+ E+ Q+ Sbjct: 124 TPDFYSCRLIGGVMEEECNQLF 145 >gi|219557312|ref|ZP_03536388.1| putative bifunctional riboflavin biosynthesis protein RIBG: diaminohydroxyphosphoribosylaminopyrimidine deaminase + [Mycobacterium tuberculosis T17] Length = 237 Score = 84.2 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 24/152 (15%) Query: 8 MSCALEEAQ--NAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A+E + PVGAV V N +I+ G HAE++A+R Sbjct: 13 MGLAIEHSYQVKGTTYPNPPVGAVIVDPNGRIVGAGGTEPAGGD----HAEVVALRRAGG 68 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + + VT+EPC C A+ AR+ + Y ++P G G + Sbjct: 69 LA-----TGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPN-GIAGGGAGRLS 122 Query: 119 LATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149 A ++ G+ ++ + ++++ ++R Sbjct: 123 AAGL----QVRSGVLAEQVAAGPLREWLHKQR 150 >gi|254467350|ref|ZP_05080761.1| riboflavin biosynthesis protein RibD [Rhodobacterales bacterium Y4I] gi|206688258|gb|EDZ48740.1| riboflavin biosynthesis protein RibD [Rhodobacterales bacterium Y4I] Length = 365 Score = 84.2 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 49/153 (32%), Gaps = 21/153 (13%) Query: 1 MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + +M+ AL + VG V V +I+ R + HAE A Sbjct: 1 MDTDHRYMALALSLGRRGQGNCWPNPAVGCVIVKGRRIVGRGWTKPGGR----PHAETEA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + YVTLEPC CA A+ A + R+ + Sbjct: 57 LAQAGEAA-----RGATAYVTLEPCAHQGATPPCAQALIKAGVARVVAAIGDSDPRVSGQ 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A + G+ ++ + FF Sbjct: 112 GIRMLRDAG----IRVDTGVWGAQAARDHAGFF 140 >gi|254420634|ref|ZP_05034358.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Brevundimonas sp. BAL3] gi|196186811|gb|EDX81787.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain protein [Brevundimonas sp. BAL3] Length = 209 Score = 84.2 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 56/157 (35%), Gaps = 36/157 (22%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTA-----HA 54 FM+ A++ A A E P VG V V + +II++A TA HA Sbjct: 7 DRAFMAQAIDLAT--ARMGETWPNPAVGCVIVKDGRIIAQA---------ATAPGGRPHA 55 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPKG 107 E A+ + +YVTLEPC CA ++ A + R+ +P Sbjct: 56 EEQAVPAAGAEI-----EGATVYVTLEPCGARSSGRQSCAHFLTEAGVERVVIACLDPSP 110 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 GT+ + G+ + + F Sbjct: 111 FAAGRGTERLRAKGL----TVETGLMCDEGAALCEGF 143 >gi|66824141|ref|XP_645425.1| CMP/dCMP deaminase, zinc-binding domain-containing protein [Dictyostelium discoideum AX4] gi|60473538|gb|EAL71481.1| CMP/dCMP deaminase, zinc-binding domain-containing protein [Dictyostelium discoideum AX4] Length = 224 Score = 84.2 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 14/140 (10%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M A++ A + GA V N ++ G H E+ AI Sbjct: 51 HEKYMKIAIDVAVENNSK----FGAAIVHKNGTLACTG--VNIGGSRMYHGEVKAIMNCT 104 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG--------IENGTQ 115 ++ + +Y T EPC MC+AAI + +++ + + +++ Sbjct: 105 SKYAKATWEDYYMYTTGEPCPMCSAAIMWTKFQKVIFASYVSNMYCERCFNQLPMDSNEI 164 Query: 116 FYTLATCHHSPEIYPGISEQ 135 F +H+ + G+ + Sbjct: 165 FKLGYGINHNIVVIGGVLDN 184 >gi|148975779|ref|ZP_01812610.1| Probable riboflavin biosynthesis protein RibD [Vibrionales bacterium SWAT-3] gi|145964852|gb|EDK30104.1| Probable riboflavin biosynthesis protein RibD [Vibrionales bacterium SWAT-3] Length = 141 Score = 84.2 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 53/149 (35%), Gaps = 25/149 (16%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL+ + A + PVG + V N+K++S + HAE+ A+ Sbjct: 2 NQQYMLQALQASHQALPDCQPNPPVGCILVKNDKVVSVGYTQKVGGN----HAEVEAL-- 55 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + V YVTLEPC CA + A ++ + +P G Sbjct: 56 ---NHYDGDMEGVTAYVTLEPCSFVGRTPACANTLVKAGVKHVVVAMLDPDPRNNGRGVA 112 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 H ++ G+ + + F Sbjct: 113 ILES----HGVKVDVGL----CQAQVSAF 133 >gi|282866177|ref|ZP_06275224.1| riboflavin biosynthesis protein RibD [Streptomyces sp. ACTE] gi|282558961|gb|EFB64516.1| riboflavin biosynthesis protein RibD [Streptomyces sp. ACTE] Length = 366 Score = 84.2 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 46/141 (32%), Gaps = 25/141 (17%) Query: 8 MSCALEEAQN---AALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+ A A N + VG V + + +R HAEI A+R Sbjct: 10 MRRAIALAARGLGATSPNPV-VGCVVLDAAGQPAGEGFHRRAGG----PHAEIHALREAG 64 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 E YVTLEPC CA A+ A IRR+ Y +P Sbjct: 65 -----ERARGGTAYVTLEPCNHTGRTGPCAQALLDAGIRRVVYAVGDPNPQATGGADTLR 119 Query: 118 TLATCHHSPEIYPGISEQRSR 138 ++ G+ + Sbjct: 120 AE-----GVQVEQGLLADEAE 135 >gi|162452084|ref|YP_001614451.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Sorangium cellulosum 'So ce 56'] gi|161162666|emb|CAN93971.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Sorangium cellulosum 'So ce 56'] Length = 381 Score = 84.2 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 55/145 (37%), Gaps = 20/145 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 M A+EEA A PVGAV + ++++ A + + Sbjct: 13 DAAMMRLAIEEAHKAMPSPNPPVGAVVLNAAGEVVAVAHHARAGEEHAEG---------L 63 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + + LYVTLEPC C A+ A I+R+ GA +P + G Q Sbjct: 64 ALAAAGDAARGGTLYVTLEPCNHEGRTPPCVDAVLSAGIKRVVVGAPDPNPSVVGGGAQR 123 Query: 117 YTLATCHHSPEIYPGISEQRSRQII 141 + A + G++ +R +I Sbjct: 124 LSDAGL----AVDVGVAGAEARALI 144 >gi|86749753|ref|YP_486249.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris HaA2] gi|86572781|gb|ABD07338.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Rhodopseudomonas palustris HaA2] Length = 389 Score = 84.2 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 36/145 (24%), Positives = 50/145 (34%), Gaps = 21/145 (14%) Query: 3 KGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM AL + R P VGAV V + I+ R HAE+ A+ Sbjct: 26 TDRRFMQLALTLGRRGLGRTGTNPAVGAVLVKDGVIVGRGW----TQDGGRPHAEVEAL- 80 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + E LYVTLEPC CA AI A + R+ +P G Sbjct: 81 ----ARAGEAARGATLYVTLEPCSHHGRSPPCADAIIAAGVARVVSAIEDPNPLVGGQGH 136 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139 A + G+ + + + Sbjct: 137 GKLRAAG----IAVELGVCVEEAAR 157 >gi|326388321|ref|ZP_08209917.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Novosphingobium nitrogenifigens DSM 19370] gi|326207053|gb|EGD57874.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Novosphingobium nitrogenifigens DSM 19370] Length = 321 Score = 84.2 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 44/131 (33%), Gaps = 18/131 (13%) Query: 1 MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M A A R VGAV V N+++ R R HAE A Sbjct: 1 MPTDADWMRSAAALAARGRPLSRPNPAVGAVLVRENRVVGRGF--TRAGGRP--HAEAEA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIE 111 + M LYVTLEPC CA + AR R+ G ++P Sbjct: 57 LAMAGDAT-----RGATLYVTLEPCAHVSPRGPACADLVVAARPARVVVGCTDPDPRTAG 111 Query: 112 NGTQFYTLATC 122 G A Sbjct: 112 QGIARLRDAGI 122 >gi|149202273|ref|ZP_01879246.1| riboflavin biosynthesis protein RibD [Roseovarius sp. TM1035] gi|149144371|gb|EDM32402.1| riboflavin biosynthesis protein RibD [Roseovarius sp. TM1035] Length = 364 Score = 83.8 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 49/149 (32%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM+ AL + + VG V V +I+ R HAE A+ Sbjct: 5 DARFMALALSLGRRGMGQCAPNPAVGCVIVQGGRIVGRGW----TSPGGRPHAEPQALAQ 60 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YV+LEPC CA A+ A I R+ + G Sbjct: 61 AGELA-----RGATAYVSLEPCAHHGQTPPCAEALIAAGIARVVAPFDDNDPRVAGRGFA 115 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ +++ + + F Sbjct: 116 MLRAAG----IEVRTGVMAEQAGRDLAGF 140 >gi|229526073|ref|ZP_04415477.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio cholerae bv. albensis VL426] gi|229336231|gb|EEO01249.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio cholerae bv. albensis VL426] Length = 141 Score = 83.8 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 50/148 (33%), Gaps = 25/148 (16%) Query: 5 NVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 M ALE ++ A PVG V V I++ + HAE+ A+ Sbjct: 3 EEHMLRALEVSKFALPNCLPNPPVGCVLVKGGSIVAEGFTQKIGGN----HAEVQALEA- 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + V YVTLEPC CAA + + I+ + +P G Q Sbjct: 58 ----YSGDMDSVTAYVTLEPCSFIGRTPACAATLVKSGIKHVVVSILDPDLRNSGRGIQI 113 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ + F Sbjct: 114 LEQAG----IQVDIGL----CSSQVSAF 133 >gi|134115449|ref|XP_773438.1| hypothetical protein CNBI0520 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256064|gb|EAL18791.1| hypothetical protein CNBI0520 [Cryptococcus neoformans var. neoformans B-3501A] Length = 224 Score = 83.8 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 26/122 (21%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP------VGAVAV--LNNKIISRAGNRNRELKDVTAH 53 + +M ++E +P G+V V NN+++ N E+ D T H Sbjct: 35 EVDLHWMRKSIEV---------MPPCHFNAYGSVIVNASNNELLCSGYNSQLEIGDPTEH 85 Query: 54 AEILAIRMGCRILS---------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 E+ AIR + + EI P+ +Y T EPC MC + I + +R+ YG S+ Sbjct: 86 GEVNAIRNCVKKYTELGWTPAQITEIWPQSWIYTTAEPCPMCGSTILQSGFKRVIYGTSS 145 Query: 105 PK 106 P Sbjct: 146 PD 147 >gi|255080300|ref|XP_002503730.1| predicted protein [Micromonas sp. RCC299] gi|226518997|gb|ACO64988.1| predicted protein [Micromonas sp. RCC299] Length = 215 Score = 83.8 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 46/130 (35%), Gaps = 21/130 (16%) Query: 26 VGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 VG V V + ++ + HAE+ A+R YVTLEPC Sbjct: 96 VGCVIVDERSGVVVGEGYHPKAGE----PHAEVFALRAAGA-----NAKGCTAYVTLEPC 146 Query: 84 ------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 C+ A+ A + R+ G +P G + A E+ G E+ Sbjct: 147 DHFGRTPPCSRALVDAGVTRVVVGFVDPDPRVSGGGIRTLLDAG----IEVCVGCCEEEC 202 Query: 138 RQIIQDFFKE 147 R+I DF Sbjct: 203 REINADFIAR 212 >gi|319787998|ref|YP_004147473.1| CMP/dCMP deaminase zinc-binding protein [Pseudoxanthomonas suwonensis 11-1] gi|317466510|gb|ADV28242.1| CMP/dCMP deaminase zinc-binding protein [Pseudoxanthomonas suwonensis 11-1] Length = 186 Score = 83.8 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 17/149 (11%) Query: 10 CALEEAQNAAL-RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A+E ++ R+ P GAV ++++I+ NR AHAE +A + + L Sbjct: 33 LAIELSRRNVEARSGGPFGAVVFGPDHRVIATGVNRVVPHTTSLAHAENMAYMLAQQKLQ 92 Query: 68 QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122 L +V L + +PC C A A I RL GA + T+F Sbjct: 93 TPRLNDVLAPVTLATSSQPCCQCYGATIWAGIDRLLIGARAED---VMELTEFDEGPLPA 149 Query: 123 -------HHSPEIYPGISEQRSRQIIQDF 144 + I ++R++++ + Sbjct: 150 DWTGELGRRGISVTRDILRDQAREVLRAY 178 >gi|260441248|ref|ZP_05795064.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase [Neisseria gonorrhoeae DGI2] gi|268600600|ref|ZP_06134767.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae PID18] gi|291044592|ref|ZP_06570301.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae DGI2] gi|268584731|gb|EEZ49407.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae PID18] gi|291011486|gb|EFE03482.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae DGI2] Length = 369 Score = 83.8 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 57/159 (35%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M AL+ A + P VG V ++I+ + + HAE+ A+ Sbjct: 4 DTDISMMENALDLADLGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + +VTLEPC CA A+ + + R+ +P G Sbjct: 60 RQAGEMA-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 115 LVLLKAAGI--KTEC--GLLENKARELNRGFLSRIERRR 149 >gi|281210887|gb|EFA85053.1| hypothetical protein PPL_02049 [Polysphondylium pallidum PN500] Length = 234 Score = 83.8 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 57/156 (36%), Gaps = 22/156 (14%) Query: 4 GNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEILAIR 60 +M A + A + + V V N ++ N+N K H EI+AI Sbjct: 46 HEKYMQIAYDLAVAKKSI------FTTVIVAPNGTVACTGLNQNE--KSAIYHGEIVAIL 97 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF---- 116 I ++ LY T E C MC AA A ++ YG S + Q Sbjct: 98 NCSAIYNKNTWEGYSLYTTGESCAMCQAAAMWAGFDQIIYGTSIETLYCEKCLGQLPVLS 157 Query: 117 -------YTLATCHHSPEIYPGISEQRSRQIIQDFF 145 Y L+ + +I GI +++ + ++F Sbjct: 158 NQINALAYGLSGNNSPAQIIGGILARKTDTLFPNYF 193 >gi|118578520|ref|YP_899770.1| CMP/dCMP deaminase [Pelobacter propionicus DSM 2379] gi|118501230|gb|ABK97712.1| CMP/dCMP deaminase, zinc-binding protein [Pelobacter propionicus DSM 2379] Length = 204 Score = 83.8 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 55/148 (37%), Gaps = 11/148 (7%) Query: 8 MSCALEEAQNAALRN-EIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M ++ ++ P GA V + +I+ N HAE++A+ + Sbjct: 32 MGFVIQLSRLNVCHGSGGPFGAAVFGRDGMLIAPGINLVASSNCSLLHAEMVALACAQQA 91 Query: 66 LSQEILPE-----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN--GTQFYT 118 L + + + DLY + EPC MC AI + + L GA + + G + Sbjct: 92 LGRFDIGDGGRVACDLYASTEPCAMCFGAIPWSGVSGLVCGARDRDARAVGFDEGPKLSD 151 Query: 119 -LATCHHS-PEIYPGISEQRSRQIIQDF 144 + + + + +++++ Sbjct: 152 WVGALGRRGISVERDLLRHEACSVLREY 179 >gi|254456442|ref|ZP_05069871.1| riboflavin biosynthesis protein RibD [Candidatus Pelagibacter sp. HTCC7211] gi|207083444|gb|EDZ60870.1| riboflavin biosynthesis protein RibD [Candidatus Pelagibacter sp. HTCC7211] Length = 353 Score = 83.8 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 63/146 (43%), Gaps = 25/146 (17%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL+ A++ L P VG + V ++KIIS + + HAE+ AI+ Sbjct: 1 MDLALDLARSNEGLTGTNPSVGCIIVKHDKIISIG----QTSYNGRPHAEVNAIKN---- 52 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 S E L + +YVTLEPC C ++I ++++ + Y + + Sbjct: 53 -SIENLNDATMYVTLEPCSHHGVTPPCTSSIIKSKLKEVIYSIIDIDQRVKGKTYKILKS 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145 ++ G+ +++ ++ F+ Sbjct: 112 K----KIKVRTGLLKKK----VKQFY 129 >gi|33861821|ref|NP_893382.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640189|emb|CAE19724.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 362 Score = 83.8 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 55/150 (36%), Gaps = 22/150 (14%) Query: 4 GNVFMSCALEEAQ--NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M A+ A VGAV + N +IS + K HAE +A Sbjct: 8 DIKWMKRAIYLASLGKGRTSPNPMVGAVILDKNGNLISEGFH----SKSGMPHAEAMAFN 63 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + + +YV LEPC C I I+R++ +P G Sbjct: 64 NLKK-----DARDGTIYVNLEPCCHQGKTPPCVDKIISFGIKRVFVSIEDPDKRMSGKGI 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A +++ G+ ++ S+++ + F Sbjct: 119 KLLKDAG----IKVHLGLCKKESKELNKSF 144 >gi|241763274|ref|ZP_04761331.1| riboflavin biosynthesis protein RibD [Acidovorax delafieldii 2AN] gi|241367549|gb|EER61836.1| riboflavin biosynthesis protein RibD [Acidovorax delafieldii 2AN] Length = 368 Score = 83.8 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 57/148 (38%), Gaps = 19/148 (12%) Query: 9 SCALEEAQNAA-LRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 AL +A A + N P VG V V + I+ + + HAE++A+R Sbjct: 9 REALRQAARALFISNPNPRVGCVLVDSDGTILGKGFTQQAGG----PHAEVMALRDAA-- 62 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + YVTLEPC C+ A+ A I R+ +P G F L Sbjct: 63 TGGRDVRGATAYVTLEPCAHQGRTGPCSDALISAGIGRVVASIEDPNPLVAGQG--FARL 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 + E+ PG SR++ FF Sbjct: 121 RAAGVAVEVGPG--ACESRELNIGFFSR 146 >gi|159898944|ref|YP_001545191.1| riboflavin biosynthesis protein RibD [Herpetosiphon aurantiacus ATCC 23779] gi|159891983|gb|ABX05063.1| riboflavin biosynthesis protein RibD [Herpetosiphon aurantiacus ATCC 23779] Length = 371 Score = 83.8 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 15/87 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VGAV V +I+ R + AHAE++A+R E LYVTLEPC Sbjct: 30 VGAVVVQAGQIVGRGHTQPAGQ----AHAEVMALREAG-----EQARGASLYVTLEPCTI 80 Query: 84 ----TMCAAAISLARIRRLYYGASNPK 106 C AI A I + + +P Sbjct: 81 WGRTPPCTDAIIAAGIAEVIIASRDPN 107 >gi|320012649|gb|ADW07499.1| CMP/dCMP deaminase zinc-binding protein [Streptomyces flavogriseus ATCC 33331] Length = 162 Score = 83.8 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 2/102 (1%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +E A + P G+V V ++ + NR D T H E R Sbjct: 6 SDLRHLRRCVELAAEGLRAGDEPFGSVLVDAEGEVRAEGRNRV-AGGDRTRHPEFELARW 64 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 ++ E +Y + E C MCAAA + + R+ Y AS Sbjct: 65 AADRMTPEERATAVVYTSGEHCPMCAAAHAWVGLGRIVYVAS 106 >gi|197248845|ref|YP_002145398.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197212548|gb|ACH49945.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 367 Score = 83.8 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 56/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V N I+ ++ D HAE+ A+R Sbjct: 2 QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHQR--AGDP--HAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + + + F K R Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143 >gi|59800550|ref|YP_207262.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase [Neisseria gonorrhoeae FA 1090] gi|293397713|ref|ZP_06641919.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae F62] gi|59717445|gb|AAW88850.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase [Neisseria gonorrhoeae FA 1090] gi|291611659|gb|EFF40728.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae F62] Length = 369 Score = 83.8 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 24/153 (15%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A + P VG V ++I+ + + HAE+ A+R + Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHALRQAGEM 65 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +VTLEPC CA A+ + + R+ +P G Sbjct: 66 A-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKA 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 121 AGI--KTEC--GLLENKARELNRGFLSRIERRR 149 >gi|325926037|ref|ZP_08187401.1| cytosine/adenosine deaminase [Xanthomonas perforans 91-118] gi|325543563|gb|EGD14982.1| cytosine/adenosine deaminase [Xanthomonas perforans 91-118] Length = 186 Score = 83.8 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 17/149 (11%) Query: 10 CALEEAQ-NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A+E ++ N R+ P GAV +++II+ A NR AHAE +A + + L Sbjct: 33 LAIELSRMNVRERSGGPFGAVVFGPDHRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQ 92 Query: 68 QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA--- 120 L +V L + +PC C A A I RL GA + TQF Sbjct: 93 TPRLNDVLSPVTLATSAQPCCQCYGATVWAGIDRLLIGARADDVMAL---TQFDEGPLPA 149 Query: 121 -----TCHHSPEIYPGISEQRSRQIIQDF 144 E+ + ++ +++++ Sbjct: 150 DWVGELSRRGIEVVRDVLRDQACAVLRNY 178 >gi|332025750|gb|EGI65908.1| tRNA-specific adenosine deaminase-like protein 3 [Acromyrmex echinatior] Length = 423 Score = 83.4 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 36/60 (60%) Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 +EPC +CA A+ +R+ R++YG +N G + + T +T+ +H ++ GI E+ RQ Sbjct: 353 IEPCPLCAMALLHSRVARIFYGTANQNVGVLGSKTILHTVPGLNHRYRVWSGILERECRQ 412 >gi|54303332|ref|YP_133325.1| putative riboflavin biosynthesis protein RibD [Photobacterium profundum SS9] gi|46916762|emb|CAG23525.1| Putative riboflavin biosynthesis protein RibD [Photobacterium profundum SS9] Length = 141 Score = 83.4 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 21/140 (15%) Query: 5 NVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +FM AL+ +++A PVG V V N+ I+S + HAE+ A+ Sbjct: 3 EIFMLRALQISKSALPDCTPNPPVGCVLVKNDFIVSEGFTQAIGGN----HAEVQALNS- 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + YVTLEPC CA + + I+R+ +P G + Sbjct: 58 ----YSGSTENITAYVTLEPCSYVGRTPACANTLINSGIKRVVVSMLDPDPRNSGKGVKI 113 Query: 117 YTLATCHHSPEIYPGISEQR 136 A ++ G+ + Sbjct: 114 LEQAG----VQVEIGLCNDQ 129 >gi|289663533|ref|ZP_06485114.1| hypothetical protein XcampvN_10764 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289670923|ref|ZP_06491998.1| hypothetical protein XcampmN_21153 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 186 Score = 83.4 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 17/149 (11%) Query: 10 CALEEAQ-NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A+E ++ N R+ P GAV +++II+ A NR AHAE +A + + L Sbjct: 33 LAIELSRMNVQERSGGPFGAVVFGPDHRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQ 92 Query: 68 QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA--- 120 L +V L + +PC C A A I RL GA + TQF Sbjct: 93 TPRLNDVLAPVTLATSAQPCCQCYGATVWAGIDRLLIGARADDVMAL---TQFDEGPLPA 149 Query: 121 -----TCHHSPEIYPGISEQRSRQIIQDF 144 E+ + ++ +++++ Sbjct: 150 DWVGELSRRGIEVVRDVLRDQACAVLRNY 178 >gi|258546002|ref|ZP_05706236.1| riboflavin biosynthesis protein RibD [Cardiobacterium hominis ATCC 15826] gi|258518731|gb|EEV87590.1| riboflavin biosynthesis protein RibD [Cardiobacterium hominis ATCC 15826] Length = 369 Score = 83.4 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 53/153 (34%), Gaps = 21/153 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M ALE A+ P VG V V + + + + HAE A+R Sbjct: 6 QDIPWMQAALELARQGIFSTAPNPRVGCVIVKGGEAVGKGFHVRAGE----PHAEAHALR 61 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YV LEPC CA A+ A + R+ +P G Sbjct: 62 EAGAAARGAT-----AYVNLEPCAHQGRTPPCADALIAAGVARVVVACRDPNPLVAGQGI 116 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A ++ G+ E+ ++ + FF+ Sbjct: 117 ARLQAAG----IDVTEGVCEEEAQALNSGFFRR 145 >gi|27365734|ref|NP_761262.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio vulnificus CMCP6] gi|27361883|gb|AAO10789.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio vulnificus CMCP6] Length = 141 Score = 83.4 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 50/148 (33%), Gaps = 25/148 (16%) Query: 5 NVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 M ALE ++ A PVG V V I++ + HAE+ A+ Sbjct: 3 EEHMLRALEVSKFALPNCLPNPPVGCVLVKEGSIVAEGFTQKIGGN----HAEVQALEA- 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + V YVTLEPC CAA + + I+ + +P G Q Sbjct: 58 ----YSGDMDSVTAYVTLEPCSFIGRTPACAATLVKSGIKHVVVSILDPDPRNGGRGIQI 113 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ + F Sbjct: 114 LEQAG----VQVDIGL----CSSQVSAF 133 >gi|294678596|ref|YP_003579211.1| riboflavin biosynthesis protein RibD [Rhodobacter capsulatus SB 1003] gi|294477416|gb|ADE86804.1| riboflavin biosynthesis protein RibD [Rhodobacter capsulatus SB 1003] Length = 367 Score = 83.4 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 44/142 (30%), Gaps = 25/142 (17%) Query: 2 KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 + FM AL A + P VG V V +I+ R + HAE Sbjct: 3 EADGRFMRLALGLAGRGL--GNVWPNPAVGCVIVNGGRIVGRGWTQPGGR----PHAERR 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ YVTLEPC CA A+ A + R+ +P Sbjct: 57 ALDQAGPAA-----RGATAYVTLEPCAHHGKTPPCAEALIAAGVVRVVSALEDPDPRVSG 111 Query: 112 NGTQFYTLATCHHSPEIYPGIS 133 G A + G+ Sbjct: 112 RGHAMLRAAG----IAVETGVL 129 >gi|296118298|ref|ZP_06836879.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Corynebacterium ammoniagenes DSM 20306] gi|295968856|gb|EFG82100.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Corynebacterium ammoniagenes DSM 20306] Length = 183 Score = 83.4 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 2/102 (1%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ +E A A + P G++ V + ++ NR D T H E R Sbjct: 26 DERAFLRRCVELAHEALEAGDEPFGSILVSADGDVLFEDRNRV-ASGDNTQHPEFAIARW 84 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 LS E Y + E C MCAAA + + R+ Y +S Sbjct: 85 AAANLSPEERAVATAYTSGEHCPMCAAAHAWVGLGRIVYASS 126 >gi|328543537|ref|YP_004303646.1| Bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase [polymorphum gilvum SL003B-26A1] gi|326413281|gb|ADZ70344.1| Bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase [Polymorphum gilvum SL003B-26A1] Length = 388 Score = 83.4 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 54/149 (36%), Gaps = 25/149 (16%) Query: 4 GNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNK----IISRAGNRNRELKDVTAHAEIL 57 +M+ A+ A+ R P VGA+ V + ++ R HAE+ Sbjct: 22 DRRYMAAAVALARRGLGRVWPNPSVGALIVADTGGAPVVVGRG----VTSPPGGPHAEVN 77 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+R + YVTLEPC C+AA+ A +RR+ G ++P Sbjct: 78 ALRQAG-----DRARGATCYVTLEPCSHHGRTPPCSAALVSAGVRRVVIGIADPNRRVSG 132 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQI 140 G A + G+ R + Sbjct: 133 RGIGMLRDAG----IAVTVGVEAVACRDL 157 >gi|297621124|ref|YP_003709261.1| putative CMP/dCMP deaminase [Waddlia chondrophila WSU 86-1044] gi|297376425|gb|ADI38255.1| putative CMP/dCMP deaminase [Waddlia chondrophila WSU 86-1044] Length = 165 Score = 83.4 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 54/137 (39%), Gaps = 9/137 (6%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 +++ L A+ + + P ++ V +II+ A NR E +V AH EI + Sbjct: 10 IYLERCLTLAEISLKSGDEPFASLLVNEKGEIIAEARNRINE-HNVLAHPEIELAQWAAN 68 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA---- 120 L++ +Y T E C MCAAA L + ++ Y +S+ + + Sbjct: 69 HLTRNKRKLTTMYTTGEHCPMCAAAHGLVGLGKIVYISSSAQLASWLKELNIHEPPINFI 128 Query: 121 ---TCHHSPEIYPGISE 134 ++ I+ Sbjct: 129 PIQEILPHTQVIGPIAA 145 >gi|325920349|ref|ZP_08182285.1| cytosine/adenosine deaminase [Xanthomonas gardneri ATCC 19865] gi|325549169|gb|EGD20087.1| cytosine/adenosine deaminase [Xanthomonas gardneri ATCC 19865] Length = 186 Score = 83.4 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 17/149 (11%) Query: 10 CALEEAQ-NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A+E ++ N R+ P GAV +N+II+ A NR AHAE +A + + L Sbjct: 33 LAIELSRMNVQERSGGPFGAVVFGPDNRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQ 92 Query: 68 QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122 L +V L + +PC C A A I RL GA + T+F Sbjct: 93 TPRLNDVLSPVTLATSAQPCCQCYGATVWAGIDRLLIGARAEDVMAL---TEFDEGPLPA 149 Query: 123 -------HHSPEIYPGISEQRSRQIIQDF 144 E+ + +++ +++++ Sbjct: 150 DWVGELTRRGIEVVRDVHREQACAVLRNY 178 >gi|294625778|ref|ZP_06704397.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664496|ref|ZP_06729844.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292599948|gb|EFF44066.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605729|gb|EFF49032.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 186 Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 17/149 (11%) Query: 10 CALEEAQ-NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A+E ++ N R+ P GAV +++II+ A NR AHAE +A + + L Sbjct: 33 LAIELSRMNVRERSGGPFGAVVFGPDHRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQ 92 Query: 68 QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA--- 120 L +V L + +PC C A A I RL GA + TQF Sbjct: 93 TPRLNDVLSPVTLATSAQPCCQCYGATVWAGIDRLLIGARADDVMAL---TQFDEGPLPA 149 Query: 121 -----TCHHSPEIYPGISEQRSRQIIQDF 144 E+ + ++ +++++ Sbjct: 150 DWVGELSRRGIEVVRDVLRDQACAVLRNY 178 >gi|240114937|ref|ZP_04728999.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase [Neisseria gonorrhoeae PID18] Length = 361 Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 57/153 (37%), Gaps = 24/153 (15%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL+ A + P VG V ++I+ + + HAE+ A+R + Sbjct: 2 MENALDLADLGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHALRQAGEM 57 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +VTLEPC CA A+ + + R+ +P G Sbjct: 58 A-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKA 112 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 113 AGI--KTEC--GLLENKARELNRGFLSRIERRR 141 >gi|161504399|ref|YP_001571511.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865746|gb|ABX22369.1| hypothetical protein SARI_02510 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 367 Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 56/155 (36%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V N +I+ ++ HAE+ A+R Sbjct: 2 QDEFYMARALKLAQRGRFTTHPNPDVGCVIVNNGEIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGCGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + + + F K R Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143 >gi|301335276|ref|ZP_07223520.1| riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis L2tet1] Length = 375 Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 59/150 (39%), Gaps = 23/150 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++ FM A+ + + P VG V V N +I ++ + HAE+ A Sbjct: 6 EQQLFFMRKAVALGEKGRIFA-PPNPWVGCVIVKNGCVIGEGWHQGI----GSPHAEVCA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++ + L ++YVTLEPC C + +++ +Y G +P + Sbjct: 61 VQ-----DQKCSLEGAEVYVTLEPCCHFGRTPPCVDLLIKSKVAAVYVGLLDPDPRVCKK 115 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 G A +Y G+ Q ++ +Q Sbjct: 116 GVARLQAAGIP----VYVGVGSQEAKTSLQ 141 >gi|238752768|ref|ZP_04614237.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia rohdei ATCC 43380] gi|238709026|gb|EEQ01275.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia rohdei ATCC 43380] Length = 369 Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 56/157 (35%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M+ +M+ A E A+ + P VG V V + +I+ ++ HAE+ A Sbjct: 1 MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHQRAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM +VTLEPC CA A+ A + R+ +P Sbjct: 57 LRMAGEKAQ-----GATAFVTLEPCSHHGRTPPCADALVAAGVVRVVAAMQDPNPEVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A ++ G+ + F K R Sbjct: 112 GLYKLKQAG----IDVNHGLMLAEAEAANLGFLKRMR 144 >gi|15608547|ref|NP_215925.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Mycobacterium tuberculosis H37Rv] gi|15840867|ref|NP_335904.1| riboflavin-specific deaminase [Mycobacterium tuberculosis CDC1551] gi|148661200|ref|YP_001282723.1| riboflavin-specific deaminase [Mycobacterium tuberculosis H37Ra] gi|148822629|ref|YP_001287383.1| bifunctional riboflavin biosynthesis protein ribG: diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino) uracil reductase [Mycobacterium tuberculosis F11] gi|167968448|ref|ZP_02550725.1| bifunctional riboflavin biosynthesis protein ribG: diaminohydroxyphosphoribosylaminopyrimidine deaminase + [Mycobacterium tuberculosis H37Ra] gi|215403256|ref|ZP_03415437.1| bifunctional riboflavin biosynthesis protein ribG: diaminohydroxyphosphoribosylaminopyrimidine deaminase + [Mycobacterium tuberculosis 02_1987] gi|215411054|ref|ZP_03419862.1| bifunctional riboflavin biosynthesis protein ribG: diaminohydroxyphosphoribosylaminopyrimidine deaminase + [Mycobacterium tuberculosis 94_M4241A] gi|215445596|ref|ZP_03432348.1| bifunctional riboflavin biosynthesis protein ribG: diaminohydroxyphosphoribosylaminopyrimidine deaminase + [Mycobacterium tuberculosis T85] gi|218753118|ref|ZP_03531914.1| bifunctional riboflavin biosynthesis protein ribG: diaminohydroxyphosphoribosylaminopyrimidine deaminase + [Mycobacterium tuberculosis GM 1503] gi|253799541|ref|YP_003032542.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis KZN 1435] gi|254231651|ref|ZP_04924978.1| bifunctional riboflavin biosynthesis protein ribG : diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino) uracil reductase [Mycobacterium tuberculosis C] gi|254364292|ref|ZP_04980338.1| bifunctional riboflavin biosynthesis protein ribG : diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino) uracil reductase [Mycobacterium tuberculosis str. Haarlem] gi|254550423|ref|ZP_05140870.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289554800|ref|ZP_06444010.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis KZN 605] gi|289745160|ref|ZP_06504538.1| riboflavin-specific deaminase [Mycobacterium tuberculosis 02_1987] gi|289757515|ref|ZP_06516893.1| riboflavin-specific deaminase [Mycobacterium tuberculosis T85] gi|289761568|ref|ZP_06520946.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino) uracil reductase [Mycobacterium tuberculosis GM 1503] gi|294994971|ref|ZP_06800662.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis 210] gi|297633965|ref|ZP_06951745.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis KZN 4207] gi|297730954|ref|ZP_06960072.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis KZN R506] gi|298524915|ref|ZP_07012324.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Mycobacterium tuberculosis 94_M4241A] gi|313658287|ref|ZP_07815167.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis KZN V2475] gi|2829534|sp|P71677|RIBD_MYCTU RecName: Full=Riboflavin biosynthesis protein RibD; Includes: RecName: Full=Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase; Includes: RecName: Full=5-amino-6-(5-phosphoribosylamino)uracil reductase; AltName: Full=HTP reductase gi|1542917|emb|CAB02188.1| PROBABLE BIFUNCTIONAL riboflavin biosynthesis protein RIBG : Diaminohydroxyphosphoribosylaminopyrimidine deaminase (Riboflavin-specific deaminase) + 5-amino-6-(5-phosphoribosylamino) uracil reductase (HTP reductase) [Mycobacterium tuberculosis H37Rv] gi|13881067|gb|AAK45718.1| riboflavin-specific deaminase [Mycobacterium tuberculosis CDC1551] gi|124600710|gb|EAY59720.1| bifunctional riboflavin biosynthesis protein ribG : diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino) uracil reductase [Mycobacterium tuberculosis C] gi|134149806|gb|EBA41851.1| bifunctional riboflavin biosynthesis protein ribG : diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino) uracil reductase [Mycobacterium tuberculosis str. Haarlem] gi|148505352|gb|ABQ73161.1| riboflavin-specific deaminase [Mycobacterium tuberculosis H37Ra] gi|148721156|gb|ABR05781.1| bifunctional riboflavin biosynthesis protein ribG: diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino) uracil reductase [Mycobacterium tuberculosis F11] gi|253321044|gb|ACT25647.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis KZN 1435] gi|289439432|gb|EFD21925.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis KZN 605] gi|289685688|gb|EFD53176.1| riboflavin-specific deaminase [Mycobacterium tuberculosis 02_1987] gi|289709074|gb|EFD73090.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino) uracil reductase [Mycobacterium tuberculosis GM 1503] gi|289713079|gb|EFD77091.1| riboflavin-specific deaminase [Mycobacterium tuberculosis T85] gi|298494709|gb|EFI30003.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Mycobacterium tuberculosis 94_M4241A] gi|323720073|gb|EGB29179.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis CDC1551A] gi|326903030|gb|EGE49963.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis W-148] gi|328459289|gb|AEB04712.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis KZN 4207] Length = 339 Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 22/133 (16%) Query: 25 PVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 PVGAV V N +I+ G HAE++A+R + + VT+EPC Sbjct: 32 PVGAVIVDPNGRIVGAGGTEPAGGD----HAEVVALRRAGGLA-----AGAIVVVTMEPC 82 Query: 84 ------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR- 136 C A+ AR+ + Y ++P G G + A ++ G+ ++ Sbjct: 83 NHYGKTPPCVNALIEARVGTVVYAVADPN-GIAGGGAGRLSAAGL----QVRSGVLAEQV 137 Query: 137 SRQIIQDFFKERR 149 + ++++ ++R Sbjct: 138 AAGPLREWLHKQR 150 >gi|308231834|ref|ZP_07663946.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu001] gi|308369792|ref|ZP_07419077.2| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu002] gi|308370712|ref|ZP_07666996.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu003] gi|308371959|ref|ZP_07667277.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu004] gi|308373132|ref|ZP_07667517.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu005] gi|308374304|ref|ZP_07667756.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu006] gi|308375454|ref|ZP_07668025.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu007] gi|308376713|ref|ZP_07668330.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu008] gi|308377721|ref|ZP_07480168.2| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu009] gi|308378931|ref|ZP_07668864.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu010] gi|308380068|ref|ZP_07669113.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu011] gi|308215903|gb|EFO75302.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu001] gi|308326399|gb|EFP15250.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu002] gi|308331085|gb|EFP19936.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu003] gi|308334898|gb|EFP23749.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu004] gi|308338707|gb|EFP27558.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu005] gi|308342394|gb|EFP31245.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu006] gi|308346232|gb|EFP35083.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu007] gi|308350184|gb|EFP39035.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu008] gi|308354825|gb|EFP43676.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu009] gi|308358776|gb|EFP47627.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu010] gi|308362713|gb|EFP51564.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis SUMu011] Length = 337 Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 22/133 (16%) Query: 25 PVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 PVGAV V N +I+ G HAE++A+R + + VT+EPC Sbjct: 30 PVGAVIVDPNGRIVGAGGTEPAGGD----HAEVVALRRAGGLA-----AGAIVVVTMEPC 80 Query: 84 ------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR- 136 C A+ AR+ + Y ++P G G + A ++ G+ ++ Sbjct: 81 NHYGKTPPCVNALIEARVGTVVYAVADPN-GIAGGGAGRLSAAGL----QVRSGVLAEQV 135 Query: 137 SRQIIQDFFKERR 149 + ++++ ++R Sbjct: 136 AAGPLREWLHKQR 148 >gi|84502762|ref|ZP_01000881.1| riboflavin biosynthesis protein RibD [Oceanicola batsensis HTCC2597] gi|84389157|gb|EAQ01955.1| riboflavin biosynthesis protein RibD [Oceanicola batsensis HTCC2597] Length = 367 Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 49/150 (32%), Gaps = 21/150 (14%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+S AL + R VG V V + +I+ R HAE A+ Sbjct: 6 DRRFLSLALALGRRGLGRTWPNPSVGCVIVRDGRIVGRGWTAPGGR----PHAEPQALAQ 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YV+LEPC C A+ A I R+ ++ G + Sbjct: 62 AGEAA-----RGATAYVSLEPCAHHGKTPPCTEALIAAGIARVVAPLADTDPRVAGQGFE 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ G+ + + + FF Sbjct: 117 RLRWAG----IEVSTGLLGEEAARDHAGFF 142 >gi|170017119|ref|YP_001728038.1| riboflavin biosynthesis protein RibD [Leuconostoc citreum KM20] gi|169803976|gb|ACA82594.1| Riboflavin biosynthesis protein RibD [Leuconostoc citreum KM20] Length = 347 Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 20/126 (15%) Query: 23 EIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E P VGA+ V N +I++ + + AHAEI A + Q + + +YVTLE Sbjct: 24 ENPRVGAIIVKNGQILATGYHHSFGA----AHAEINAFEN---LRDQTDIVDSTMYVTLE 76 Query: 82 PCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 PC + CA AI+ ++R+ G+ +P F A I + Sbjct: 77 PCFVTGKVGACALAIAQWGVKRVVVGSFDPNPDTHGRSVTFLRQAG------IRVDVLGT 130 Query: 136 RSRQII 141 QI+ Sbjct: 131 EDSQIL 136 >gi|166154072|ref|YP_001654190.1| riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis 434/Bu] gi|166154947|ref|YP_001653202.1| riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|165930060|emb|CAP03543.1| Riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis 434/Bu] gi|165930935|emb|CAP06497.1| Riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 375 Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 59/150 (39%), Gaps = 23/150 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++ FM A+ + + P VG V V N +I ++ + HAE+ A Sbjct: 6 EQQLFFMRKAVALGEKGRIFA-PPNPWVGCVIVKNGCVIGEGWHQGI----GSPHAEVCA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++ + L ++YVTLEPC C + +++ +Y G +P + Sbjct: 61 VQ-----DQKCSLEGAEVYVTLEPCCHFGRTPPCVDLLIKSKVAAVYVGLLDPDPRVCKK 115 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 G A +Y G+ Q ++ +Q Sbjct: 116 GVARLQAAGIP----VYVGVGSQEAKTSLQ 141 >gi|116610344|gb|ABK03068.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Arthrobacter sp. FB24] Length = 386 Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 53/147 (36%), Gaps = 18/147 (12%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+ A VGAV + + + + +R TAHAE AI R Sbjct: 1 MDAALDAALLGPRGANPLVGAVVIGPDGRQLVTGYHR----GAGTAHAEADAIAQAGR-- 54 Query: 67 SQEILPEVDLYVTLEPCTMC------AAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L + VTLEPC C A AI A I + Y +P Sbjct: 55 QGLDLTGSTMVVTLEPCNHCGRTGPCAQAIIDAGIASVVYAVDDPHDPAAGGAATLRAA- 113 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147 + G+S + + ++ + +F+ Sbjct: 114 ----GVSVRSGLSARAAFELNRRWFEA 136 >gi|218767600|ref|YP_002342112.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase/phosphoribosylamino)uracil reductase [Neisseria meningitidis Z2491] gi|121051608|emb|CAM07908.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase/phosphoribosylamino)uracil reductase [Neisseria meningitidis Z2491] Length = 369 Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M AL A + P VG V ++I+ + + HAE+ A+ Sbjct: 4 DTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + +VTLEPC CA A+ + + R+ +P G Sbjct: 60 RQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 115 LAMLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149 >gi|76789470|ref|YP_328556.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Chlamydia trachomatis A/HAR-13] gi|76168000|gb|AAX51008.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Chlamydia trachomatis A/HAR-13] Length = 375 Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 23/150 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++ FM A+ + + P VG V V N +I ++ + HAE+ A Sbjct: 6 EQQLFFMRKAVALGEKGRIFA-PPNPWVGCVIVKNGGVIGEGWHQGI----GSPHAEVCA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++ + L +++VTLEPC C + +++ +Y G +P + Sbjct: 61 VQ-----DQKCSLEGAEVFVTLEPCCHFGRTPPCVDLLIKSKVAAVYVGLLDPDPRVCKK 115 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 G A +Y G+ Q ++ +Q Sbjct: 116 GVARLQAAGIP----VYVGVGSQEAKTSLQ 141 >gi|256113297|ref|ZP_05454165.1| riboflavin biosynthesis protein RibD [Brucella melitensis bv. 3 str. Ether] gi|265994710|ref|ZP_06107267.1| riboflavin biosynthesis protein RibD [Brucella melitensis bv. 3 str. Ether] gi|262765823|gb|EEZ11612.1| riboflavin biosynthesis protein RibD [Brucella melitensis bv. 3 str. Ether] Length = 373 Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 47/145 (32%), Gaps = 21/145 (14%) Query: 3 KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM + A+ VG + V + I+ R HAE A+ Sbjct: 14 NDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQALA 69 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA A+ + + R+ A++P G Sbjct: 70 EVGEAA-----RGATAYVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSGKGF 124 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139 A E+ PGI +++ Sbjct: 125 AILREAG----IEVVPGILSEQAAD 145 >gi|161830108|ref|YP_001596350.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii RSA 331] gi|161761975|gb|ABX77617.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii RSA 331] Length = 151 Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 33/91 (36%), Gaps = 16/91 (17%) Query: 41 GNRNRELKDVTAHAEILAIRMGCRILSQEIL----------------PEVDLYVTLEPCT 84 N + + D TAHAE+ IR R L+ L +Y + EPC Sbjct: 19 HNHSVDWHDPTAHAEMSVIRKAARELNVTDLGHIRKEDSKLSQPSEWSHCVIYSSAEPCP 78 Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 MC AAI A I L + A+ Sbjct: 79 MCMAAIYWAGIHYLVFSATRYDTAAPGVNWD 109 >gi|325206734|gb|ADZ02187.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis M04-240196] Length = 369 Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M AL A + P VG V ++I+ + + HAE+ A+ Sbjct: 4 DTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + +VTLEPC CA A+ + + R+ +P G Sbjct: 60 RQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 115 FAMLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149 >gi|319794177|ref|YP_004155817.1| riboflavin biosynthesis protein ribd [Variovorax paradoxus EPS] gi|315596640|gb|ADU37706.1| riboflavin biosynthesis protein RibD [Variovorax paradoxus EPS] Length = 375 Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 59/155 (38%), Gaps = 19/155 (12%) Query: 2 KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILA 58 ++ ++ AL A +A L + P VG V +++ + + HAE++A Sbjct: 5 EQDAQHIATALRLASDALLLTDPNPRVGCVLCDAEGRVLGQGHTQKAGG----PHAEVMA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 +R + YVTLEPC+ C A+ A I R+ ++P Sbjct: 61 LRDAAAQGHS--VEGATAYVTLEPCSHHGRTGPCCDALIAAGIERVVASLADPNPLVAGQ 118 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G + A E+ G SR++ FF Sbjct: 119 GFERLRAAG----VEVEVGPGADESRELNIGFFSR 149 >gi|17987472|ref|NP_540106.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Brucella melitensis bv. 1 str. 16M] gi|256044453|ref|ZP_05447357.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Brucella melitensis bv. 1 str. Rev.1] gi|260563804|ref|ZP_05834290.1| riboflavin biosynthesis protein RibD [Brucella melitensis bv. 1 str. 16M] gi|265990874|ref|ZP_06103431.1| riboflavin biosynthesis protein RibD [Brucella melitensis bv. 1 str. Rev.1] gi|17983168|gb|AAL52370.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Brucella melitensis bv. 1 str. 16M] gi|260153820|gb|EEW88912.1| riboflavin biosynthesis protein RibD [Brucella melitensis bv. 1 str. 16M] gi|263001658|gb|EEZ14233.1| riboflavin biosynthesis protein RibD [Brucella melitensis bv. 1 str. Rev.1] Length = 373 Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 47/145 (32%), Gaps = 21/145 (14%) Query: 3 KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM + A+ VG + V + I+ R HAE A+ Sbjct: 14 NDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQALA 69 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA A+ + + R+ A++P G Sbjct: 70 EVGEAA-----RGATAYVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSGKGF 124 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139 A E+ PGI +++ Sbjct: 125 AILREAG----IEVVPGILSEQAAD 145 >gi|255349125|ref|ZP_05381132.1| riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis 70] gi|255503662|ref|ZP_05382052.1| riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis 70s] gi|255507341|ref|ZP_05382980.1| riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis D(s)2923] gi|289525774|emb|CBJ15255.1| Riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis Sweden2] gi|296435349|gb|ADH17527.1| riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis E/150] gi|296439066|gb|ADH21219.1| riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis E/11023] Length = 375 Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 59/150 (39%), Gaps = 23/150 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++ FM A+ + + P VG V V N +I ++ + HAE+ A Sbjct: 6 EQQLFFMRKAVALGEKGRIFA-PPNPWVGCVIVKNGCVIGEGWHQGI----GSPHAEVCA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++ + L ++YVTLEPC C + +++ +Y G +P + Sbjct: 61 VQ-----DQKCSLEGAEVYVTLEPCCHFGRTPPCVDLLIKSKVAAVYVGLLDPDPRVCKK 115 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 G A +Y G+ Q ++ +Q Sbjct: 116 GVARLQAAGIP----VYVGVGSQEAKTSLQ 141 >gi|294852128|ref|ZP_06792801.1| riboflavin biosynthesis protein RibD [Brucella sp. NVSL 07-0026] gi|294820717|gb|EFG37716.1| riboflavin biosynthesis protein RibD [Brucella sp. NVSL 07-0026] Length = 373 Score = 82.7 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 47/145 (32%), Gaps = 21/145 (14%) Query: 3 KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM + A+ VG + V + I+ R HAE A+ Sbjct: 14 NDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQALA 69 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA A+ + + R+ A++P G Sbjct: 70 EVGEAA-----RGATAYVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSGKGF 124 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139 A E+ PGI +++ Sbjct: 125 AILREAG----IEVVPGILSEQAAD 145 >gi|240079985|ref|ZP_04724528.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase [Neisseria gonorrhoeae FA19] gi|268596126|ref|ZP_06130293.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae FA19] gi|268549914|gb|EEZ44933.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae FA19] Length = 369 Score = 82.7 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 24/153 (15%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A + P VG V +I+ + + HAE+ A+R + Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGE----PHAEVHALRQAGEM 65 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +VTLEPC CA A+ + + R+ +P G Sbjct: 66 A-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKA 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 121 AGI--KTEC--GLLENKARELNRGFLSRIERRR 149 >gi|317485112|ref|ZP_07943994.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bilophila wadsworthia 3_1_6] gi|316923647|gb|EFV44851.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bilophila wadsworthia 3_1_6] Length = 194 Score = 82.7 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 1/103 (0%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 +K + ++ + P G V +++ N D AH E+ R Sbjct: 24 EKDIELLRKGIQAGFKSLAYGNEPYGCVLAGPSGELLLEGLNTCLTEHDPLAHGEMNLCR 83 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + E L + +YV PC+MC AI I R+ + S Sbjct: 84 EAAQKYDPEFLWQCSIYVPGSPCSMCTCAIFYTNIGRIVHATS 126 >gi|50954248|ref|YP_061536.1| riboflavin-specific deaminase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950730|gb|AAT88431.1| riboflavin-specific deaminase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 341 Score = 82.7 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 56/148 (37%), Gaps = 27/148 (18%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A N P VG V + + + I++ +R T HAE A+ Sbjct: 7 MRAALRLAANGPAAGVNPRVGCVLLDADGRTIAKGFHR----GAGTPHAEADAL----GK 58 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP---KGGGIENGTQF 116 L + VTLEPC C+ A+ A + R+ YG ++P GG E Q Sbjct: 59 LPEGGARGTTAVVTLEPCNHWGRTGPCSEALLDAGVARVVYGIADPGERSRGGAERLRQ- 117 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144 E+ G+ + + D+ Sbjct: 118 -------GGVEVTGGVLAAEIEEFLDDW 138 >gi|256369199|ref|YP_003106707.1| riboflavin biosynthesis protein RibD [Brucella microti CCM 4915] gi|255999359|gb|ACU47758.1| riboflavin biosynthesis protein RibD [Brucella microti CCM 4915] Length = 373 Score = 82.7 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 47/145 (32%), Gaps = 21/145 (14%) Query: 3 KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM + A+ VG + V + I+ R HAE A+ Sbjct: 14 NDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQALA 69 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA A+ + + R+ A++P G Sbjct: 70 EVGEAA-----RGATAYVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSGKGF 124 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139 A E+ PGI +++ Sbjct: 125 AILREAG----IEVVPGILSEQAAD 145 >gi|254701540|ref|ZP_05163368.1| riboflavin biosynthesis protein RibD [Brucella suis bv. 5 str. 513] gi|261752090|ref|ZP_05995799.1| riboflavin biosynthesis protein RibD [Brucella suis bv. 5 str. 513] gi|261741843|gb|EEY29769.1| riboflavin biosynthesis protein RibD [Brucella suis bv. 5 str. 513] Length = 373 Score = 82.7 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 47/145 (32%), Gaps = 21/145 (14%) Query: 3 KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM + A+ VG + V + I+ R HAE A+ Sbjct: 14 NDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQALA 69 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA A+ + + R+ A++P G Sbjct: 70 EVGEAA-----RGATAYVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSGKGF 124 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139 A E+ PGI +++ Sbjct: 125 AILREAG----IEVVPGILSEQAAD 145 >gi|332530146|ref|ZP_08406095.1| riboflavin biosynthesis protein RibD [Hylemonella gracilis ATCC 19624] gi|332040416|gb|EGI76793.1| riboflavin biosynthesis protein RibD [Hylemonella gracilis ATCC 19624] Length = 377 Score = 82.7 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 55/149 (36%), Gaps = 19/149 (12%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M AL A+ L + P VG V V +++ + HAE++A+R Sbjct: 7 MQRALALAEQGLYLTSPNPRVGCVIVGVEGQLLGEGHTQRAGG----PHAEVMALRDAQA 62 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 YVTLEPC C A++ A I ++ +P G F Sbjct: 63 RGHDVR--GATAYVTLEPCAHQGRTGPCCEALAAAGIGKVVASLEDPNPKVAGQG--FAR 118 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 L E+ PG +SR++ FF Sbjct: 119 LRAAGVVVEVGPG--AAQSRELNLGFFSR 145 >gi|240015845|ref|ZP_04722385.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase [Neisseria gonorrhoeae FA6140] gi|240117225|ref|ZP_04731287.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase [Neisseria gonorrhoeae PID1] gi|240120474|ref|ZP_04733436.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase [Neisseria gonorrhoeae PID24-1] gi|240122774|ref|ZP_04735730.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase [Neisseria gonorrhoeae PID332] gi|254492997|ref|ZP_05106168.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae 1291] gi|268598251|ref|ZP_06132418.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae MS11] gi|268602915|ref|ZP_06137082.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae PID1] gi|268681384|ref|ZP_06148246.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae PID332] gi|226512037|gb|EEH61382.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae 1291] gi|268582382|gb|EEZ47058.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae MS11] gi|268587046|gb|EEZ51722.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae PID1] gi|268621668|gb|EEZ54068.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae PID332] Length = 369 Score = 82.7 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 24/153 (15%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A + P VG V +I+ + + HAE+ A+R + Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGE----PHAEVHALRQAGEM 65 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +VTLEPC CA A+ + + R+ +P G Sbjct: 66 A-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKA 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 121 AGI--KTEC--GLLENKARELNRGFLSRIERRR 149 >gi|163759204|ref|ZP_02166290.1| riboflavin-specific deaminase / reductase [Hoeflea phototrophica DFL-43] gi|162283608|gb|EDQ33893.1| riboflavin-specific deaminase / reductase [Hoeflea phototrophica DFL-43] Length = 379 Score = 82.7 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 52/148 (35%), Gaps = 25/148 (16%) Query: 4 GNVFMSCALEEAQ-NAALRNEIP-VGAVAVL--NNK--IISRAGNRNRELKDVTAHAEIL 57 FM+ A+ A+ + P V + V N++ I+ R HAE Sbjct: 19 DRRFMAAAIRLARWHQGRTGSNPSVATLIVREINDEPVIVGRGVTAVGGR----PHAEPQ 74 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ + YVTLEPC CA A+ A + R+ AS+P Sbjct: 75 ALAEAGDLA-----RGATAYVTLEPCAHHGRTPPCAEALVSAGVSRVVAAASDPDDRVSG 129 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQ 139 G Q A E+ + + + + Sbjct: 130 RGYQILRDA----RIEVEENVLAEEAAR 153 >gi|329947524|ref|ZP_08294716.1| guanine deaminase family protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328524214|gb|EGF51287.1| guanine deaminase family protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 160 Score = 82.7 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 45/120 (37%), Gaps = 5/120 (4%) Query: 1 MKKGNVFMSCALEEAQN----AALRNEIPVGAVAVLNNKIISR-AGNRNRELKDVTAHAE 55 M+ F+ + +A +P V V + IS NR +E D +AHAE Sbjct: 1 MQTMTRFLEQLMAQAVIRSITHVESGGLPFVGVIVDGQQAISEFGVNRVQETGDPSAHAE 60 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 I+AIR + L L T EPC MC ARI + + + + Sbjct: 61 IVAIRDALSSSGETDLRGTTLLATGEPCGMCYRHAINARITDIRVAVDRDQVAELGFDYR 120 >gi|284033021|ref|YP_003382952.1| riboflavin biosynthesis protein RibD [Kribbella flavida DSM 17836] gi|283812314|gb|ADB34153.1| riboflavin biosynthesis protein RibD [Kribbella flavida DSM 17836] Length = 344 Score = 82.7 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 45/146 (30%), Gaps = 25/146 (17%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 +M A+E A P VG V + + HAE+ A+ Sbjct: 8 DVAWMRRAIELAARGLGST-HPNPVVGCVITGRDGHPAGEGFHAVAGG----PHAEVAAL 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 RM + YVTLEPC CA A+ A + R+ Y +P G Sbjct: 63 RMAG-----DRARGGTAYVTLEPCNHTGRTGPCADALIEAGVARVLYAVPDPNRQAAG-G 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQ 139 H + G+ + Sbjct: 117 ADKLRSKNVH----VEQGLLRAEAEA 138 >gi|261855451|ref|YP_003262734.1| CMP/dCMP deaminase zinc-binding protein [Halothiobacillus neapolitanus c2] gi|261835920|gb|ACX95687.1| CMP/dCMP deaminase zinc-binding protein [Halothiobacillus neapolitanus c2] Length = 178 Score = 82.7 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 57/153 (37%), Gaps = 18/153 (11%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + + E A A P GA+ V + ++ N D HAE R+ Sbjct: 22 LRRSNEIALRALDLGRHPFGALLVGPDHEMVLLEQCN-----IDTVNHAESTLARVAATN 76 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---------IENGTQF 116 S E L + LY +EPC MCA A I R+ + + + + + Sbjct: 77 YSPEFLWQCTLYTAVEPCCMCAGTAYWANIGRVVFAMTEEQLLAETGNHHENPTMSVSSH 136 Query: 117 YTLATCHHSPEIYPGISE--QRSRQIIQDFFKE 147 Y A + + E + +RQ+ +DF++ Sbjct: 137 YVYAHGQKPVVLIGPVEELIEETRQVHRDFWRN 169 >gi|23501654|ref|NP_697781.1| riboflavin biosynthesis protein RibD [Brucella suis 1330] gi|62289719|ref|YP_221512.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 1 str. 9-941] gi|82699648|ref|YP_414222.1| cytidine/deoxycytidylate deaminase zinc-binding subunit [Brucella melitensis biovar Abortus 2308] gi|148559719|ref|YP_001258746.1| riboflavin biosynthesis protein RibD [Brucella ovis ATCC 25840] gi|161618734|ref|YP_001592621.1| riboflavin biosynthesis protein RibD [Brucella canis ATCC 23365] gi|163843038|ref|YP_001627442.1| riboflavin biosynthesis protein RibD [Brucella suis ATCC 23445] gi|189023968|ref|YP_001934736.1| riboflavin biosynthesis protein RibD [Brucella abortus S19] gi|225627265|ref|ZP_03785302.1| riboflavin biosynthesis protein RibD [Brucella ceti str. Cudo] gi|225852283|ref|YP_002732516.1| riboflavin biosynthesis protein RibD [Brucella melitensis ATCC 23457] gi|237815207|ref|ZP_04594205.1| riboflavin biosynthesis protein RibD [Brucella abortus str. 2308 A] gi|254689028|ref|ZP_05152282.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 6 str. 870] gi|254693511|ref|ZP_05155339.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 3 str. Tulya] gi|254697163|ref|ZP_05158991.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 2 str. 86/8/59] gi|254704089|ref|ZP_05165917.1| riboflavin biosynthesis protein RibD [Brucella suis bv. 3 str. 686] gi|254707010|ref|ZP_05168838.1| riboflavin biosynthesis protein RibD [Brucella pinnipedialis M163/99/10] gi|254709881|ref|ZP_05171692.1| riboflavin biosynthesis protein RibD [Brucella pinnipedialis B2/94] gi|254713882|ref|ZP_05175693.1| riboflavin biosynthesis protein RibD [Brucella ceti M644/93/1] gi|254717061|ref|ZP_05178872.1| riboflavin biosynthesis protein RibD [Brucella ceti M13/05/1] gi|254730059|ref|ZP_05188637.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 4 str. 292] gi|256031374|ref|ZP_05444988.1| riboflavin biosynthesis protein RibD [Brucella pinnipedialis M292/94/1] gi|256257278|ref|ZP_05462814.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 9 str. C68] gi|256264212|ref|ZP_05466744.1| riboflavin biosynthesis protein RibD [Brucella melitensis bv. 2 str. 63/9] gi|260168507|ref|ZP_05755318.1| riboflavin biosynthesis protein RibD [Brucella sp. F5/99] gi|260545528|ref|ZP_05821269.1| riboflavin biosynthesis protein RibD [Brucella abortus NCTC 8038] gi|260566663|ref|ZP_05837133.1| riboflavin biosynthesis protein RibD [Brucella suis bv. 4 str. 40] gi|260754523|ref|ZP_05866871.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 6 str. 870] gi|260757744|ref|ZP_05870092.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 4 str. 292] gi|260761569|ref|ZP_05873912.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 2 str. 86/8/59] gi|260883551|ref|ZP_05895165.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 9 str. C68] gi|261213771|ref|ZP_05928052.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 3 str. Tulya] gi|261218871|ref|ZP_05933152.1| riboflavin biosynthesis protein RibD [Brucella ceti M13/05/1] gi|261314477|ref|ZP_05953674.1| riboflavin biosynthesis protein RibD [Brucella pinnipedialis M163/99/10] gi|261317423|ref|ZP_05956620.1| riboflavin biosynthesis protein RibD [Brucella pinnipedialis B2/94] gi|261321630|ref|ZP_05960827.1| riboflavin biosynthesis protein RibD [Brucella ceti M644/93/1] gi|261754749|ref|ZP_05998458.1| riboflavin biosynthesis protein RibD [Brucella suis bv. 3 str. 686] gi|261757977|ref|ZP_06001686.1| riboflavin biosynthesis protein RibD [Brucella sp. F5/99] gi|265988460|ref|ZP_06101017.1| riboflavin biosynthesis protein RibD [Brucella pinnipedialis M292/94/1] gi|297248124|ref|ZP_06931842.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 5 str. B3196] gi|23347574|gb|AAN29696.1| riboflavin biosynthesis protein RibD [Brucella suis 1330] gi|62195851|gb|AAX74151.1| RibD, riboflavin biosynthesis protein RibD [Brucella abortus bv. 1 str. 9-941] gi|82615749|emb|CAJ10745.1| Cytidine/deoxycytidylate deaminase, zinc-binding region:Bacterial bifunctional deaminase-reductase, C-terminal:Riboflavin bio [Brucella melitensis biovar Abortus 2308] gi|148370976|gb|ABQ60955.1| riboflavin biosynthesis protein RibD [Brucella ovis ATCC 25840] gi|161335545|gb|ABX61850.1| riboflavin biosynthesis protein RibD [Brucella canis ATCC 23365] gi|163673761|gb|ABY37872.1| riboflavin biosynthesis protein RibD [Brucella suis ATCC 23445] gi|189019540|gb|ACD72262.1| riboflavin biosynthesis protein RibD [Brucella abortus S19] gi|225617270|gb|EEH14315.1| riboflavin biosynthesis protein RibD [Brucella ceti str. Cudo] gi|225640648|gb|ACO00562.1| riboflavin biosynthesis protein RibD [Brucella melitensis ATCC 23457] gi|237790044|gb|EEP64254.1| riboflavin biosynthesis protein RibD [Brucella abortus str. 2308 A] gi|260096935|gb|EEW80810.1| riboflavin biosynthesis protein RibD [Brucella abortus NCTC 8038] gi|260156181|gb|EEW91261.1| riboflavin biosynthesis protein RibD [Brucella suis bv. 4 str. 40] gi|260668062|gb|EEX55002.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 4 str. 292] gi|260672001|gb|EEX58822.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 2 str. 86/8/59] gi|260674631|gb|EEX61452.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 6 str. 870] gi|260873079|gb|EEX80148.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 9 str. C68] gi|260915378|gb|EEX82239.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 3 str. Tulya] gi|260923960|gb|EEX90528.1| riboflavin biosynthesis protein RibD [Brucella ceti M13/05/1] gi|261294320|gb|EEX97816.1| riboflavin biosynthesis protein RibD [Brucella ceti M644/93/1] gi|261296646|gb|EEY00143.1| riboflavin biosynthesis protein RibD [Brucella pinnipedialis B2/94] gi|261303503|gb|EEY07000.1| riboflavin biosynthesis protein RibD [Brucella pinnipedialis M163/99/10] gi|261737961|gb|EEY25957.1| riboflavin biosynthesis protein RibD [Brucella sp. F5/99] gi|261744502|gb|EEY32428.1| riboflavin biosynthesis protein RibD [Brucella suis bv. 3 str. 686] gi|263094456|gb|EEZ18278.1| riboflavin biosynthesis protein RibD [Brucella melitensis bv. 2 str. 63/9] gi|264660657|gb|EEZ30918.1| riboflavin biosynthesis protein RibD [Brucella pinnipedialis M292/94/1] gi|297175293|gb|EFH34640.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 5 str. B3196] gi|326408787|gb|ADZ65852.1| riboflavin biosynthesis protein RibD [Brucella melitensis M28] Length = 373 Score = 82.7 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 47/145 (32%), Gaps = 21/145 (14%) Query: 3 KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM + A+ VG + V + I+ R HAE A+ Sbjct: 14 NDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQALA 69 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA A+ + + R+ A++P G Sbjct: 70 EVGEAA-----RGATAYVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSGKGF 124 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139 A E+ PGI +++ Sbjct: 125 AILREAG----IEVVPGILSEQAAD 145 >gi|71083736|ref|YP_266456.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus Pelagibacter ubique HTCC1062] gi|71062849|gb|AAZ21852.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus Pelagibacter ubique HTCC1062] Length = 351 Score = 82.7 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 45/123 (36%), Gaps = 17/123 (13%) Query: 8 MSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A+ L P VG V V NNKI+S + T HAE AI+ Sbjct: 1 MELALNLAKARHGLTGINPSVGCVIVKNNKILSIG----QTGFKGTPHAEFNAIKN---- 52 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 S E + +YVTLEPC C I +I+ + YG + Sbjct: 53 -SHENIEGSKMYVTLEPCSHYGKTPPCTNIIIKNKIKEVVYGVEDIDKKVKGKTLNILKS 111 Query: 120 ATC 122 Sbjct: 112 KNI 114 >gi|21230291|ref|NP_636208.1| hypothetical protein XCC0817 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769715|ref|YP_244477.1| hypothetical protein XC_3413 [Xanthomonas campestris pv. campestris str. 8004] gi|188992931|ref|YP_001904941.1| hypothetical protein xccb100_3536 [Xanthomonas campestris pv. campestris str. B100] gi|21111839|gb|AAM40132.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575047|gb|AAY50457.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] gi|167734691|emb|CAP52901.1| Conserved hypothetical protein [Xanthomonas campestris pv. campestris] Length = 186 Score = 82.7 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 59/149 (39%), Gaps = 17/149 (11%) Query: 10 CALEEAQNAAL-RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A++ ++ R+ P GAV +++II+ A NR AHAE +A + + L Sbjct: 33 LAIDLSRMNVEARSGGPFGAVVFGPDDRIIAAAVNRVVPQNTSLAHAENMAYMLAQQRLQ 92 Query: 68 QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122 L +V L + +PC C A A I RL GA + T+F Sbjct: 93 TPRLNDVLSPVTLATSAQPCCQCYGATVWAGIDRLLIGARAEDVMAL---TEFDEGPLPA 149 Query: 123 -------HHSPEIYPGISEQRSRQIIQDF 144 E+ + +++ +++ + Sbjct: 150 DWVGELTRRGIEVVRDVQREQACAVLRSY 178 >gi|256060883|ref|ZP_05451043.1| riboflavin biosynthesis protein RibD [Brucella neotomae 5K33] gi|261324881|ref|ZP_05964078.1| riboflavin biosynthesis protein RibD [Brucella neotomae 5K33] gi|261300861|gb|EEY04358.1| riboflavin biosynthesis protein RibD [Brucella neotomae 5K33] Length = 373 Score = 82.7 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 47/145 (32%), Gaps = 21/145 (14%) Query: 3 KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM + A+ VG + V + I+ R HAE A+ Sbjct: 14 NDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQALA 69 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA A+ + + R+ A++P G Sbjct: 70 EVGEAA-----RGATAYVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSGKGF 124 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139 A E+ PGI +++ Sbjct: 125 AILREAG----IEVVPGILSEQAAD 145 >gi|254486598|ref|ZP_05099803.1| riboflavin biosynthesis protein RibD [Roseobacter sp. GAI101] gi|214043467|gb|EEB84105.1| riboflavin biosynthesis protein RibD [Roseobacter sp. GAI101] Length = 356 Score = 82.7 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 52/142 (36%), Gaps = 25/142 (17%) Query: 8 MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M+ AL + + + P VG V V ++I+ R + HAE A+ Sbjct: 1 MALALSLGRRG--QGTVWPNPAVGCVIVQGDRIVGRGWTQPGGR----PHAEPEAL---- 50 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + +YVTLEPC CA A+ A++ R+ ++ G Sbjct: 51 -AQAGAQAVGATVYVTLEPCAHTGKTPPCAQALIDAQVARVVIACADSDPRVSGKGIAML 109 Query: 118 TLATCHHSPEIYPGISEQRSRQ 139 A + G+ E +R+ Sbjct: 110 QAAG----IAVDTGVLEDEARK 127 >gi|268685855|ref|ZP_06152717.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae SK-93-1035] gi|268626139|gb|EEZ58539.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae SK-93-1035] Length = 369 Score = 82.3 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 24/153 (15%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A + P VG V +I+ + + HAE+ A+R + Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGE----PHAEVHALRQAGEM 65 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +VTLEPC CA A+ + + R+ +P G Sbjct: 66 A-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKA 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 121 AGI--KTEC--GLLENKARELNRGFLSRIERRR 149 >gi|315122228|ref|YP_004062717.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495630|gb|ADR52229.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 367 Score = 82.3 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 48/146 (32%), Gaps = 22/146 (15%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FMS AL + L P V + V + I+ R HAE A+ Sbjct: 7 DERFMSVALRFSCWGTGLTGTNPSVACLIVKDGIIVGRG----VTAYGGRPHAETQALEE 62 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA I A I R+ +P G Q Sbjct: 63 AG-----ERARGATAYVTLEPCSHYGQAPPCAKFIVEAGISRVVVCVIDPDVRVSGRGLQ 117 Query: 116 FYTLATCHHSPEIYPGISEQRSRQII 141 + + + + E+ +++ Sbjct: 118 WLSQKGI-----VVDKVLEREGERVL 138 >gi|330863855|emb|CBX73948.1| riboflavin biosynthesis protein ribD [Yersinia enterocolitica W22703] Length = 337 Score = 82.3 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 42/124 (33%), Gaps = 19/124 (15%) Query: 32 LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TM 85 + +I+ + HAE+ A+RM YVTLEPC Sbjct: 2 RDGEIVGEGYHLRAGE----PHAEVHALRMAGEKA-----RGATAYVTLEPCSHHGRTPP 52 Query: 86 CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 CA A+ A ++R+ +P G A E+ G+ + + F Sbjct: 53 CADALLTAGVKRVVAAMQDPNPQVAGRGLYKLKQAG----VEVDHGLMLAEAEAVNLGFL 108 Query: 146 KERR 149 K R Sbjct: 109 KRMR 112 >gi|240124968|ref|ZP_04737854.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase [Neisseria gonorrhoeae SK-92-679] gi|268683551|ref|ZP_06150413.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae SK-92-679] gi|268623835|gb|EEZ56235.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae SK-92-679] Length = 369 Score = 82.3 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 24/153 (15%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A + P VG V +I+ + + HAE+ A+R + Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGE----PHAEVHALRQAGEM 65 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +VTLEPC CA A+ + + R+ +P G Sbjct: 66 A-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKA 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 121 AGI--KTEC--GLLENKARELNRGFLSRIERRR 149 >gi|317508958|ref|ZP_07966591.1| riboflavin biosynthesis protein RibD [Segniliparus rugosus ATCC BAA-974] gi|316252723|gb|EFV12160.1| riboflavin biosynthesis protein RibD [Segniliparus rugosus ATCC BAA-974] Length = 363 Score = 82.3 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 41/121 (33%), Gaps = 21/121 (17%) Query: 23 EIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E PVGAV V +I+ R + AHAE++AI E YVTLE Sbjct: 44 EPPVGAVLVSPGGQIVGRGVTQPPGQ----AHAEVMAIAEAG-----ERARGATAYVTLE 94 Query: 82 PCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 PC C+ A+ A I + Y +P + G+ Sbjct: 95 PCDHVGRTGPCSRALIAAGIAEVVYAVPDPNPRSSGGARTLEAA-----GVRVRSGVLAD 149 Query: 136 R 136 Sbjct: 150 E 150 >gi|194097710|ref|YP_002000751.1| Riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae NCCP11945] gi|240013403|ref|ZP_04720316.1| Riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae DGI18] gi|240112192|ref|ZP_04726682.1| Riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae MS11] gi|193933000|gb|ACF28824.1| Riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae NCCP11945] Length = 361 Score = 82.3 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 24/153 (15%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A + P VG V +I+ + + HAE+ A+R + Sbjct: 2 MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGE----PHAEVHALRQAGEM 57 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +VTLEPC CA A+ + + R+ +P G Sbjct: 58 A-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKA 112 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 113 AGI--KTEC--GLLENKARELNRGFLSRIERRR 141 >gi|325197682|gb|ADY93138.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis G2136] Length = 369 Score = 82.3 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 55/159 (34%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M AL A + P VG V ++I+ + + HAE+ A+ Sbjct: 4 DTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + +VTLEPC CA A+ + + R+ +P G Sbjct: 60 HQAGEMA-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 115 LALLESAGI--KTEC--GLLENKARELNRGFLSSIERRR 149 >gi|15964963|ref|NP_385316.1| riboflavin biosynthesis protein [Sinorhizobium meliloti 1021] gi|307301034|ref|ZP_07580803.1| riboflavin biosynthesis protein RibD [Sinorhizobium meliloti BL225C] gi|307317768|ref|ZP_07597206.1| riboflavin biosynthesis protein RibD [Sinorhizobium meliloti AK83] gi|15074142|emb|CAC45789.1| Probable riboflavin biosynthesis protein (deaminase/reductase) [Sinorhizobium meliloti 1021] gi|20385601|gb|AAM21351.1| riboflavin-specific deaminase/reductase [Sinorhizobium meliloti] gi|306896530|gb|EFN27278.1| riboflavin biosynthesis protein RibD [Sinorhizobium meliloti AK83] gi|306903989|gb|EFN34575.1| riboflavin biosynthesis protein RibD [Sinorhizobium meliloti BL225C] Length = 401 Score = 82.3 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 53/159 (33%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ FM+ AL A+ VG + V I+ RA HAE A+ Sbjct: 6 REDERFMAAALRLARRNLGLTSTNPSVGCIIVNKGTIVGRA----VTAPGGRPHAETQAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 YV LEPC CA A+ + + R+ +P G Sbjct: 62 AEAGEKA-----RGATAYVALEPCSHHGKTPPCADALIASGVGRVVVSILDPDERVAGRG 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 A ++ G + ++++ + +++R Sbjct: 117 VVMLRGAG----IDVDIGTLHEEGGRVLEAYLMRQRKKR 151 >gi|229495189|ref|ZP_04388924.1| riboflavin biosynthesis protein RibD [Porphyromonas endodontalis ATCC 35406] gi|229317632|gb|EEN83530.1| riboflavin biosynthesis protein RibD [Porphyromonas endodontalis ATCC 35406] Length = 342 Score = 82.3 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 17/126 (13%) Query: 3 KGNVFMSCALEEAQNAALRN---EIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++M L+ A A P VGA+ V ++I+ + HAE+ Sbjct: 4 NDTLYMQRCLDLA--ALATGYTSPNPLVGAILVHQDRIVGEGYHHRAGE----PHAEVNC 57 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 R ++ + + LYV+LEPC CA + R+ R+ +P Sbjct: 58 F-ASVRPEDEKWIAQSTLYVSLEPCSHYGKTPPCAELVLQKRVPRVVVAMQDPFPEVAGR 116 Query: 113 GTQFYT 118 G Sbjct: 117 GIALLR 122 >gi|254386271|ref|ZP_05001580.1| riboflavin biosynthesis protein RibD [Streptomyces sp. Mg1] gi|194345125|gb|EDX26091.1| riboflavin biosynthesis protein RibD [Streptomyces sp. Mg1] Length = 360 Score = 82.3 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 47/142 (33%), Gaps = 25/142 (17%) Query: 8 MSCALEEAQNAA---LRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+E A N + VG V ++ ++ HAE+ A+R Sbjct: 1 MRRAIELAARGLGSTSPNPV-VGCVITDARGAVVGEGWHQRAGG----PHAEVHALRAAG 55 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 YVTLEPC CA A+ A + R+ Y S+P G Sbjct: 56 TAA-----RGGTAYVTLEPCNHTGRTGPCAQALIEAGVTRVVYAVSDPNPQASGGGATLR 110 Query: 118 TLATCHHSPEIYPGISEQRSRQ 139 G+ EQ + + Sbjct: 111 AA-----GIATEAGLLEQEAEE 127 >gi|254525413|ref|ZP_05137465.1| riboflavin biosynthesis protein RibD [Prochlorococcus marinus str. MIT 9202] gi|221536837|gb|EEE39290.1| riboflavin biosynthesis protein RibD [Prochlorococcus marinus str. MIT 9202] Length = 364 Score = 82.3 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 57/151 (37%), Gaps = 22/151 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 +M A+ A P VGAV + N K++S + K HAE +A Sbjct: 7 SHTKWMKRAIFLASLGKNTTSPNPKVGAVILDKNGKLVSEGFH----FKSGLPHAEAMAF 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + + +YV LEPC C + + ++++Y +P G Sbjct: 63 NNLKQ-----DVKGGTMYVNLEPCCHQGKTPPCVDKVISSGLKKVYISIEDPDKRVSGKG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A +++ G+ ++ S ++ + F Sbjct: 118 IKLLKKAG----VQVHLGLCKKESLELNKAF 144 >gi|21241660|ref|NP_641242.1| hypothetical protein XAC0890 [Xanthomonas axonopodis pv. citri str. 306] gi|21107023|gb|AAM35778.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 186 Score = 82.3 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 17/149 (11%) Query: 10 CALEEAQ-NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A+E ++ N + P GAV +++II+ A NR AHAE +A + + L Sbjct: 33 LAIELSRMNVRESSGGPFGAVVFGPDHRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQ 92 Query: 68 QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA--- 120 L +V L + +PC C A A I RL GA + TQF Sbjct: 93 TPRLNDVLSPVTLATSAQPCCQCYGATVWAGIDRLLIGARADDVMAL---TQFDEGPLPA 149 Query: 121 -----TCHHSPEIYPGISEQRSRQIIQDF 144 E+ + ++ +++++ Sbjct: 150 DWVGELSRRGIEVVRDVLRDQACAVLRNY 178 >gi|163841087|ref|YP_001625492.1| riboflavin biosynthesis protein [Renibacterium salmoninarum ATCC 33209] gi|162954563|gb|ABY24078.1| riboflavin biosynthesis protein [Renibacterium salmoninarum ATCC 33209] Length = 369 Score = 82.3 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 49/156 (31%), Gaps = 21/156 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M M AL A VGAV + + ++++ + T HAE LA+ Sbjct: 1 MNHDEA-MDLALATAIKGIRGANPLVGAVILGADGELLAAGHHA----GAGTPHAEALAL 55 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 L L TLEPC C+ AI A I + Y A +P Sbjct: 56 AQ----LEPSQSAGATLVCTLEPCSHVGRTPACSQAIIDAGITTVVYAADDPD-----QN 106 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + ++ + +F R Sbjct: 107 AAGGAARLRAAGITVISDVRAAEGHELNRRWFAAVR 142 >gi|54401353|gb|AAV34447.1| predicted diaminohydroxyphosphoribosylaminopyrimidine deaminase [uncultured proteobacterium RedeBAC7D11] Length = 366 Score = 82.3 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 61/155 (39%), Gaps = 26/155 (16%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + F+S A+ + + VG V V +NKII R + +HAEI AI Sbjct: 2 NDSFFISKAISLGLKGRFTAKPGVKVGCVIVKDNKIIGRGFYQKYGG----SHAEINAIN 57 Query: 61 MGCRILSQEI---LPEVDLYVTLEPCT------MCAAAISLARIRRLYYGASNPKGGGIE 111 + L DL+VTLEPC+ C + +R+ GA +P GI Sbjct: 58 DVKKKYKTNYLSKLSGSDLFVTLEPCSKKGKTGACVNELKKYDFKRIIVGAKDPTQSGIN 117 Query: 112 NGTQF-YTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + + Y + ++ + + + + FF Sbjct: 118 SLQRAGYEVKNLNNQ----------QCQILNESFF 142 >gi|254292424|ref|YP_003058447.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Hirschia baltica ATCC 49814] gi|254040955|gb|ACT57750.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Hirschia baltica ATCC 49814] Length = 215 Score = 82.3 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 56/155 (36%), Gaps = 24/155 (15%) Query: 1 MKKGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-HAEIL 57 ++ ++M A+ A+ V V V II A D HAE + Sbjct: 7 IEMDKIYMRRAIALARAQLGRTAPNPAVACVLVSGETIIGEA-----ATGDGGRPHAEEI 61 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+ L + L YVTLEPC C+ + ++ ++R+ +P Sbjct: 62 ALES----LRGQELSRATAYVTLEPCHSRSNGGAGCSDRLVVSGVKRVVIAQIDPHPTAK 117 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + + ++ G+ E + ++ + FF Sbjct: 118 DGIAKLKAA-----GLDVEVGLLEDEAAELTRGFF 147 >gi|159471802|ref|XP_001694045.1| predicted protein [Chlamydomonas reinhardtii] gi|158277212|gb|EDP02981.1| predicted protein [Chlamydomonas reinhardtii] Length = 121 Score = 82.3 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 17/112 (15%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++ ALE A+ A + VG V V + K++ + K HAE+ A+R Sbjct: 1 QDRAYILKALELAKRAQGKTHPNPAVGCVIVKDGKVVGEGYH----PKAGMPHAEVYALR 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106 YVTLEPC C+ A+ A++ R+ G +P Sbjct: 57 GAGN-----NAEGATAYVTLEPCNHYGRTPPCSRALVEAKVARVVVGVGDPN 103 >gi|164658437|ref|XP_001730344.1| hypothetical protein MGL_2726 [Malassezia globosa CBS 7966] gi|159104239|gb|EDP43130.1| hypothetical protein MGL_2726 [Malassezia globosa CBS 7966] Length = 489 Score = 82.3 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 57/164 (34%), Gaps = 37/164 (22%) Query: 9 SCALEEAQNAALRNEIPVGAVAV----LNNKIISR--AGNRNRELKDVTAHAEILAIRMG 62 + AQ A E+ +G V V + I A + HA + A+R Sbjct: 313 RRCIATAQQARAAGELGIG-VFVTNMEQDGSIAISVDAHDTRIRDAHPLRHAVLNAVRRV 371 Query: 63 CRILSQEI--------------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 I SQ L + +++T EPC CA A+ +R+R +++ +P+ G Sbjct: 372 AHIRSQSRSSTNEEAENGQDYLLTGLTMFITHEPCVYCAMALIHSRVRSVFFLFPSPRSG 431 Query: 109 GI----------------ENGTQFYTLATCHHSPEIYPGISEQR 136 G + + +H E++ I+ Sbjct: 432 GFCGAQSNASDICDGGQDGGPFCIHEQSGLNHKYEVWRWINPAE 475 >gi|239993617|ref|ZP_04714141.1| cytidine/deoxycytidylate deaminase family protein [Alteromonas macleodii ATCC 27126] Length = 93 Score = 82.3 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 27/53 (50%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA 54 ++ ++M AL A A E+PVGA VLN ++I N D +AHA Sbjct: 41 EEDIMWMRHALTLADKAESIGEVPVGACVVLNGELIGEGFNTPITDNDPSAHA 93 >gi|297560496|ref|YP_003679470.1| CMP/dCMP deaminase zinc-binding protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844944|gb|ADH66964.1| CMP/dCMP deaminase zinc-binding protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 159 Score = 82.3 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 + + A++ A+ + + P G+V V ++ NR D T H E AI Sbjct: 4 ETDMRHLRRAVDLAEESLEAGDEPFGSVLVSGEGAVLFEDRNRV-AGGDPTQHPEF-AI- 60 Query: 61 MGCRILSQEILPE----VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 R + + P +Y + E C MC+AA A + R+ Y +S Sbjct: 61 --ARWTTTRVSPGERAAATVYTSGEHCPMCSAAHGWAGLGRIVYASS 105 >gi|292669813|ref|ZP_06603239.1| riboflavin biosynthesis protein RibD [Selenomonas noxia ATCC 43541] gi|292648610|gb|EFF66582.1| riboflavin biosynthesis protein RibD [Selenomonas noxia ATCC 43541] Length = 370 Score = 81.9 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 41/151 (27%), Positives = 60/151 (39%), Gaps = 21/151 (13%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL A+ A R P VGA+ V + +++ +R HAEI A+RM Sbjct: 8 DESYMREALRLAEFARGRTSPNPLVGALIVRDGVVVANGWHRAAGE----PHAEIHALRM 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + LYVTLEPC CA A+ A + R+ +P G Sbjct: 64 AGDLA-----RGAALYVTLEPCAHHGRTGPCAEAVIAAGVARVVVALCDPNPLVAGRGIA 118 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 A E+ G+ E +R+ + F K Sbjct: 119 MLEAAG----IEVVTGVLEDEARRQNETFLK 145 >gi|317053384|ref|YP_004119151.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pantoea sp. At-9b] gi|316953123|gb|ADU72595.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pantoea sp. At-9b] Length = 144 Score = 81.9 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 57/150 (38%), Gaps = 21/150 (14%) Query: 1 MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M K FM ALE ++ A R PVG V V N ++S+ ++ HAEI A Sbjct: 1 MSKELDFMLLALEYSRLALPECRPNPPVGCVIVHNGVVVSKGFTQSPGHH----HAEIDA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I + E D++VTLEPC CA ++ + R +Y +P Sbjct: 57 I-----SRLTFPMGECDIFVTLEPCSYQGRTPSCARTLAEMKPRHIYIAIEDPHPRNSGE 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 G + + GI + + Sbjct: 112 GLRILK----NAGISFTLGIGKDEIADFLS 137 >gi|240127481|ref|ZP_04740142.1| Riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae SK-93-1035] Length = 361 Score = 81.9 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 24/153 (15%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A + P VG V +I+ + + HAE+ A+R + Sbjct: 2 MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGE----PHAEVHALRQAGEM 57 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +VTLEPC CA A+ + + R+ +P G Sbjct: 58 A-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKA 112 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 113 AGI--KTEC--GLLENKARELNRGFLSRIERRR 141 >gi|325143820|gb|EGC66136.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis M01-240013] Length = 370 Score = 81.9 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 56/159 (35%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M AL A + P VG V ++I+ + + HAE+ A+ Sbjct: 4 DTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + +VTLEPC CA A+ + + R+ +P G Sbjct: 60 HQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 +A E G+ E ++R++ + F + RR Sbjct: 115 LALLEVAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149 >gi|229822451|ref|YP_002883977.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333] gi|229568364|gb|ACQ82215.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333] Length = 176 Score = 81.9 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 4/122 (3%) Query: 18 AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE-VDL 76 R E+P+GAV +I RA + + L HA++LA+ + + L Sbjct: 27 GLARGEMPIGAVVFAGEDVIGRAFTQEQSLGRRIVHADLLAMIAADEHRGFDRSAGPLTL 86 Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG--TQFYTLATCHHSP-EIYPGIS 133 V LEPC MC A + R++YG ++P GG+E + P EI G Sbjct: 87 AVNLEPCLMCLGAAITLGVERVFYGLASPNDGGVELLAQWRPPVEQQFFRRPREIRGGFQ 146 Query: 134 EQ 135 Sbjct: 147 GD 148 >gi|327538743|gb|EGF25393.1| riboflavin biosynthesis protein RibD [Rhodopirellula baltica WH47] Length = 394 Score = 81.9 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 22/154 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ A+E A + E PVG V V ++ I + ++ HAE+ A+ Sbjct: 16 DVRWMTEAIELAYQGRGKVEPNPPVGCVLVRDSVCIGKGYHQRFGG----PHAEVEAL-- 69 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 S + YV+LEPC CA A+ A++ R+ +P G + Sbjct: 70 ----SSCDDATGATAYVSLEPCCHHGKTPPCADALIRAKVARVVVSVVDPFDQVDGGGIE 125 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ GI+++ +++ + K R Sbjct: 126 KLRAAG----IEVVTGIAKEAGEELLAAYLKRVR 155 >gi|94984408|ref|YP_603772.1| riboflavin biosynthesis protein RibD [Deinococcus geothermalis DSM 11300] gi|94554689|gb|ABF44603.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Deinococcus geothermalis DSM 11300] Length = 383 Score = 81.9 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 52/142 (36%), Gaps = 21/142 (14%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M AL +A R PVG V V +++ R + HAE+ A+R Sbjct: 26 DAALMDQALAQAAYGLGRTAPNPPVGCVIVRGGEVVGRGFHPRAGE----PHAEVFALRE 81 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E YVTLEPC CA A+ A + R+ A +P G + Sbjct: 82 AG-----ERARGATAYVTLEPCSHFGRTPPCADALIRAGVARVVVAALDPNPQVAGRGVE 136 Query: 116 FYTLATCHHSPEIYPGISEQRS 137 A H + G+ E+ + Sbjct: 137 RLRAAGLH----VTVGVGEEAA 154 >gi|157865399|ref|XP_001681407.1| deaminase [Leishmania major strain Friedlin] gi|68124703|emb|CAJ02761.1| putative deaminase [Leishmania major strain Friedlin] Length = 281 Score = 81.9 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 58/196 (29%), Gaps = 78/196 (39%) Query: 1 MKKG--NVFMSCALEEAQNAALRNEIPVGAVAVLN--NKII------------------- 37 M + FM AL EA+ A E+PVG V V N+ + Sbjct: 1 MSVHYVDTFMRAALREAELALEEGEVPVGCVLVRTEANETVYTKLALQSSDAVTNAPPHA 60 Query: 38 ---------------SRAGNRNRELKDVTAHAEILA----IRMGCRILSQE--------- 69 +R N+ AHAE +A I R Sbjct: 61 ALLRSCDQLAESCIAARGRNQTNLQHHALAHAEFIAVQKLIDDATRGGDGSAGASSSKTG 120 Query: 70 ---------------------------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L + LYVT+EPC MC A + RI +++G Sbjct: 121 ASEGENGVVEEEKQNRLTSPPTTPPLSSLADYVLYVTVEPCVMCGAMLLYNRIAHVFFGC 180 Query: 103 SNPKGGGIENGTQFYT 118 NP+ GG + Sbjct: 181 RNPRFGGNGTVLALHA 196 >gi|19075322|ref|NP_587822.1| CMP/dCMP deaminase family [Schizosaccharomyces pombe 972h-] gi|74627116|sp|P87241|RIB2_SCHPO RecName: Full=Diaminohydroxyphosphoribosylamino-pyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase gi|2213559|emb|CAB09771.1| CMP/dCMP deaminase family [Schizosaccharomyces pombe] Length = 405 Score = 81.9 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 36/137 (26%), Positives = 46/137 (33%), Gaps = 23/137 (16%) Query: 1 MK--KGNVFMSCALEEAQNAALRNEIP------VGAVAVLNNKIISRAGNRNRELKDVTA 52 MK +M AL EA+ P VGAV V N KI+S +R R Sbjct: 253 MKPYNHEEYMLKALNEAKKCE-----PTDSAFCVGAVIVQNGKIVSTGYSRERPGN---T 304 Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNP 105 HAE AI + L +Y T+EPC C I + + G+ P Sbjct: 305 HAEECAIEKFMLKNPTDSLEGAIMYSTMEPCSKRLSKKVSCTDLIVKQKFSTVVLGSLEP 364 Query: 106 KGGGIENGTQFYTLATC 122 G A Sbjct: 365 DIFVKCEGVDLLKKAGI 381 >gi|198244553|ref|YP_002214370.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205351727|ref|YP_002225528.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207855897|ref|YP_002242548.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|197939069|gb|ACH76402.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205271508|emb|CAR36326.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206707700|emb|CAR31984.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326622118|gb|EGE28463.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326626762|gb|EGE33105.1| Riboflavin biosynthesis protein ribD [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 367 Score = 81.9 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 55/155 (35%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V N I+ ++ HAE+ A+R Sbjct: 2 QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + + + F K R Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143 >gi|148909999|gb|ABR18084.1| unknown [Picea sitchensis] Length = 457 Score = 81.9 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + +M + A+ A P VG V V + I+ + + HAE+ A Sbjct: 88 MPEDAQYMRMCISLAKKALGCTSPNPMVGCVIVKDGHIVGQGFHPKAGE----PHAEVFA 143 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +R YV+LEPC C A+ AR+ R+ G +P Sbjct: 144 LREAGTKA-----EGATAYVSLEPCNHYGRTPPCTQALIQARVGRVVVGMVDPNPIVASK 198 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + ++ G+ E+ + + + + Sbjct: 199 GVATLR----NSGIDVTVGVEEKLCQTMNEAY 226 >gi|217076038|gb|ACJ86378.1| 5-amino-6-(5-phosphoribosylamino) uracil reductase [Leuconostoc mesenteroides] Length = 135 Score = 81.5 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 16/113 (14%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M A +EA A E P GAV V + ++I+ + AHAEI A Sbjct: 2 NDLTWMKLAADEAIRAMPYQTFENPRGGAVIVKDGQVITTGYHEKFGE----AHAEINAF 57 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK 106 R+ ++ LYVTLEPC+ CA I ++R+ G+ +P Sbjct: 58 N---RVKNKTEFLGATLYVTLEPCSTHGKVGSCAVQIQNWGLKRVVVGSIDPN 107 >gi|332670474|ref|YP_004453482.1| riboflavin biosynthesis protein RibD [Cellulomonas fimi ATCC 484] gi|332339512|gb|AEE46095.1| riboflavin biosynthesis protein RibD [Cellulomonas fimi ATCC 484] Length = 395 Score = 81.5 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 48/143 (33%), Gaps = 21/143 (14%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR-MGCR 64 M A+ A+ P VG V + + ++ + T HAE+ A+R R Sbjct: 27 MRQAMLLARRGPRHGANPRVGCVLLTPDGSVVGEGWHA----GAGTPHAEVAALRDAASR 82 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 L + VTLEPC C A+ A +RR+ +P + Sbjct: 83 GLPTD---GATAVVTLEPCDHTGRTGPCTQALLAAGVRRVVVSVPDPNPVAAGGAERLRA 139 Query: 119 LATCHHSPEIYPGISEQRSRQII 141 ++ + R ++ Sbjct: 140 A-----GVDVVTDVLAPDGRTLL 157 >gi|322614696|gb|EFY11625.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618802|gb|EFY15690.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623509|gb|EFY20348.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629193|gb|EFY25972.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631913|gb|EFY28667.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637350|gb|EFY34052.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642035|gb|EFY38645.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647854|gb|EFY44329.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652532|gb|EFY48886.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653306|gb|EFY49639.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660545|gb|EFY56781.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664697|gb|EFY60890.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669250|gb|EFY65400.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670795|gb|EFY66928.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678966|gb|EFY75021.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681994|gb|EFY78019.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685177|gb|EFY81174.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194475|gb|EFZ79670.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196988|gb|EFZ82130.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203973|gb|EFZ88990.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206942|gb|EFZ91895.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210840|gb|EFZ95712.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214531|gb|EFZ99282.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223088|gb|EGA07431.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227037|gb|EGA11218.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230145|gb|EGA14265.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233883|gb|EGA17972.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238423|gb|EGA22481.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244111|gb|EGA28120.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246271|gb|EGA30254.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251897|gb|EGA35760.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257894|gb|EGA41573.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261093|gb|EGA44685.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264977|gb|EGA48476.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272540|gb|EGA55947.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 367 Score = 81.5 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 55/155 (35%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V N I+ ++ HAE+ A+R Sbjct: 2 QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + G+ + + + F K R Sbjct: 113 YRLQQSG----IAVSHGLMMSEAEALNKGFLKRMR 143 >gi|204927242|ref|ZP_03218444.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323907|gb|EDZ09102.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 367 Score = 81.5 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 55/155 (35%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V N I+ ++ HAE+ A+R Sbjct: 2 QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHQRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + + + F K R Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143 >gi|291617164|ref|YP_003519906.1| RibD [Pantoea ananatis LMG 20103] gi|291152194|gb|ADD76778.1| RibD [Pantoea ananatis LMG 20103] Length = 162 Score = 81.5 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 17/106 (16%) Query: 8 MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M ALE ++ A R PVG V V + +++++ + HAEI AI Sbjct: 1 MMLALEYSRQALPECRPNPPVGCVIVRDGEVVAKGFTQPPGQH----HAEIDAI-----A 51 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNP 105 + E ++YVTLEPC CA I+ + + +Y +P Sbjct: 52 KLTFPISECEIYVTLEPCSFQGRTPSCALTIAELKPKHIYIAMDDP 97 >gi|215405109|ref|ZP_03417290.1| hypothetical protein Mtub0_15737 [Mycobacterium tuberculosis 02_1987] gi|215412978|ref|ZP_03421679.1| hypothetical protein Mtub9_16461 [Mycobacterium tuberculosis 94_M4241A] gi|215428566|ref|ZP_03426485.1| hypothetical protein MtubT9_20149 [Mycobacterium tuberculosis T92] gi|215432070|ref|ZP_03429989.1| hypothetical protein MtubE_15680 [Mycobacterium tuberculosis EAS054] gi|215447396|ref|ZP_03434148.1| hypothetical protein MtubT_16158 [Mycobacterium tuberculosis T85] gi|219559156|ref|ZP_03538232.1| hypothetical protein MtubT1_18372 [Mycobacterium tuberculosis T17] Length = 187 Score = 81.5 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 13/133 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A++ A++A P GA + + + GN E D AHAE +R L Sbjct: 36 MELAIDTARHATA----PFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 91 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE------NGTQFYTLA 120 L L T EPC MCAAA L+ +R + +G S + + + Sbjct: 92 --PELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 149 Query: 121 TCHHSPEIYPGIS 133 T P +Y G Sbjct: 150 TRPTRPSVYSGFL 162 >gi|15842685|ref|NP_337722.1| hypothetical protein MT3196 [Mycobacterium tuberculosis CDC1551] gi|167969723|ref|ZP_02552000.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium tuberculosis H37Ra] gi|218754887|ref|ZP_03533683.1| hypothetical protein MtubG1_16264 [Mycobacterium tuberculosis GM 1503] gi|254233738|ref|ZP_04927063.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|254365742|ref|ZP_04981787.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|254552197|ref|ZP_05142644.1| hypothetical protein Mtube_17378 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|308406055|ref|ZP_07494962.2| putative cytidine and deoxycytidylate deaminase zinc-binding region [Mycobacterium tuberculosis SUMu012] gi|13883005|gb|AAK47536.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium tuberculosis CDC1551] gi|124599267|gb|EAY58371.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|134151255|gb|EBA43300.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|308364666|gb|EFP53517.1| putative cytidine and deoxycytidylate deaminase zinc-binding region [Mycobacterium tuberculosis SUMu012] gi|323718345|gb|EGB27523.1| hypothetical protein TMMG_02246 [Mycobacterium tuberculosis CDC1551A] Length = 187 Score = 81.5 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 13/133 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A++ A++A P GA + + + GN E D AHAE +R L Sbjct: 36 MELAIDTARHATA----PFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 91 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE------NGTQFYTLA 120 L L T EPC MCAAA L+ +R + +G S + + + Sbjct: 92 --PELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 149 Query: 121 TCHHSPEIYPGIS 133 T P +Y G Sbjct: 150 TRPTRPSVYSGFL 162 >gi|269859573|ref|XP_002649511.1| tRNA-specific adenosine deaminase [Enterocytozoon bieneusi H348] gi|220067062|gb|EED44530.1| tRNA-specific adenosine deaminase [Enterocytozoon bieneusi H348] Length = 159 Score = 81.5 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 20/120 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 F + A A A ++NE+PVG +N I NR + KD AH E LAI Sbjct: 2 NEKF-NVAFNAANQARIKNELPVGCAVFINGVIFCTEHNRTNQYKDPLAHCEFLAI---- 56 Query: 64 RILSQEILP-----EVDLYVTLEPCTMCAAAISLAR--IRR--------LYYGASNPKGG 108 L L + Y+TLEPC MC + + I + +Y+G N G Sbjct: 57 NYLKSVDLRILNIHSCEFYITLEPCVMCYGILIELKNDILKYFPQAKFVVYFGVHNYIFG 116 >gi|302343809|ref|YP_003808338.1| riboflavin biosynthesis protein RibD [Desulfarculus baarsii DSM 2075] gi|301640422|gb|ADK85744.1| riboflavin biosynthesis protein RibD [Desulfarculus baarsii DSM 2075] Length = 377 Score = 81.5 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 49/143 (34%), Gaps = 21/143 (14%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM+ AL + R+ VGA+ V +I+ R + + HAE L Sbjct: 10 DRHFMARALALTRRGLGRSSPNPAVGALVVAEGRIVGRGWH--VKKGQP--HAEPL---- 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + LYVTLEPC C AI A + R+ YGA +P Sbjct: 62 -ALAQAGAAARGATLYVTLEPCNHQGATPPCTQAILRAGVARVVYGAGDPNP----TVAG 116 Query: 116 FYTLATCHHSPEIYPGISEQRSR 138 + G+ ++ Sbjct: 117 GGGAFLAGRGLAVEAGVLAEQCA 139 >gi|301336274|ref|ZP_07224476.1| riboflavin-specific deaminase [Chlamydia muridarum MopnTet14] Length = 368 Score = 81.5 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 23/156 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++ FM A+ + L P VG V V N +I ++ HAE+ A Sbjct: 6 EQQLFFMRKAVALGERGRLFA-PPNPWVGCVIVKNGCVIGEGWHKGIGF----PHAEVCA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 I+ S L ++YVTLEPC C + +++ +Y +P + Sbjct: 61 IQ-----DSPCSLEGAEVYVTLEPCCHFGRTPPCVDLLIKSKVAAVYVALLDPDPRVCKK 115 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 G A +Y GI + ++ +Q + +R Sbjct: 116 GIARLREAGIP----VYVGIGSKEAQASLQPYLHQR 147 >gi|227542162|ref|ZP_03972211.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Corynebacterium glucuronolyticum ATCC 51866] gi|227181991|gb|EEI62963.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Corynebacterium glucuronolyticum ATCC 51866] Length = 324 Score = 81.5 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 45/130 (34%), Gaps = 21/130 (16%) Query: 8 MSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ + A R VG V N ++I+ + HAEI+A+R Sbjct: 1 MDAAITAGEEAVGRARPNPAVGCALVKNGRVIATGSTQRVGG----PHAEIMALRAAG-- 54 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E YVTLEPC C+ A+ A I + Y + G + Sbjct: 55 ---EDARGATAYVTLEPCNHTGRTGPCSLALVEAGIATVVYLTPDTSTPEAAGGGDYLKS 111 Query: 120 ATCHHSPEIY 129 H E+ Sbjct: 112 ----HGVEVE 117 >gi|89092520|ref|ZP_01165473.1| putative cytosine deaminase [Oceanospirillum sp. MED92] gi|89083032|gb|EAR62251.1| putative cytosine deaminase [Oceanospirillum sp. MED92] Length = 188 Score = 81.5 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 4/114 (3%) Query: 13 EEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELK-DVTAHAEILAIRMG-CRILSQE 69 + A A VGAV + + ++ N+ + HAE+ + R Sbjct: 35 QLAFAALEEGNYGVGAVLLDRQGECLAVGSNQVFSQGFNSAGHAEMNLLDDFEARYDDYP 94 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + L V+LEPC MC A I A I R+ Y + + GG+ + A + Sbjct: 95 DRAGLTLLVSLEPCPMCTARILAAGIGRVIYLVED-QLGGMLSHCDRLPDAWVN 147 >gi|255940482|ref|XP_002561010.1| Pc16g06760 [Penicillium chrysogenum Wisconsin 54-1255] gi|211585633|emb|CAP93346.1| Pc16g06760 [Penicillium chrysogenum Wisconsin 54-1255] Length = 158 Score = 81.5 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + +E A+ A P G+V V + K++ NR DVT H E + L Sbjct: 10 LRRCVELARQALEAGNSPFGSVLVDSTGKVLKEDQNRTITEADVTLHPEFTLANWAQKHL 69 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 +Y + E C MC + + R+ Y +S Sbjct: 70 PLAERTATTVYTSGEHCPMCTTIHANVGLGRIVYASS 106 >gi|163854921|ref|YP_001629219.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Bordetella petrii DSM 12804] gi|163258649|emb|CAP40948.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Bordetella petrii] Length = 380 Score = 81.5 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 52/150 (34%), Gaps = 18/150 (12%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++M AL A+ P VG V V + +++ + HAEI A+R Sbjct: 8 DDLIWMRRALALARTVMYTTTPNPRVGCVIVRDGRVLGEGATQPPGG----PHAEICALR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 E + LYVTLEPC CA A++ A R+ +P G Sbjct: 64 DAAAR--GESVQGATLYVTLEPCSHYGRTPPCADAVAAAGPARVVVAMGDPNPQVRGQGL 121 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + + + +I F Sbjct: 122 ARLRAAG----IAVTSNVCLDEALEINAGF 147 >gi|326538505|gb|ADZ86720.1| riboflavin biosynthesis protein RibD [Brucella melitensis M5-90] Length = 373 Score = 81.5 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 47/141 (33%), Gaps = 21/141 (14%) Query: 7 FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM + A+ VG + V + I+ R HAE A+ Sbjct: 18 FMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQALAEVGE 73 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 YVTLEPC CA A+ + + R+ A++P G Sbjct: 74 AA-----RGATAYVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSGKGFAILR 128 Query: 119 LATCHHSPEIYPGISEQRSRQ 139 A E+ PGI +++ Sbjct: 129 EAG----IEVVPGILSEQAAD 145 >gi|115524816|ref|YP_781727.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris BisA53] gi|115518763|gb|ABJ06747.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Rhodopseudomonas palustris BisA53] Length = 383 Score = 81.5 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 42/118 (35%), Gaps = 17/118 (14%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL + VGAV V + I+ R + R HAE+ A+ Sbjct: 21 DLRYMQLALALGRRGLGNTWPNPAVGAVIVKDGVIVGRGWTQPRGR----PHAEVEAL-- 74 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + E LYVTLEPC C A+ A + R+ +P G Sbjct: 75 ---ARAGEAARGATLYVTLEPCSHHGKTPPCCDAVIEAGLARVVAAIEDPNPEVAGQG 129 >gi|15610251|ref|NP_217630.1| hypothetical protein Rv3114 [Mycobacterium tuberculosis H37Rv] gi|148662968|ref|YP_001284491.1| hypothetical protein MRA_3146 [Mycobacterium tuberculosis H37Ra] gi|148824307|ref|YP_001289061.1| hypothetical protein TBFG_13134 [Mycobacterium tuberculosis F11] gi|253800146|ref|YP_003033147.1| hypothetical protein TBMG_03158 [Mycobacterium tuberculosis KZN 1435] gi|289555386|ref|ZP_06444596.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289763297|ref|ZP_06522675.1| cytosine/adenosine deaminase [Mycobacterium tuberculosis GM 1503] gi|297635752|ref|ZP_06953532.1| hypothetical protein MtubK4_16592 [Mycobacterium tuberculosis KZN 4207] gi|297732750|ref|ZP_06961868.1| hypothetical protein MtubKR_16752 [Mycobacterium tuberculosis KZN R506] gi|313660083|ref|ZP_07816963.1| hypothetical protein MtubKV_16757 [Mycobacterium tuberculosis KZN V2475] gi|2076689|emb|CAB08371.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148507120|gb|ABQ74929.1| conserved hypothetical protein [Mycobacterium tuberculosis H37Ra] gi|148722834|gb|ABR07459.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] gi|253321649|gb|ACT26252.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|289440018|gb|EFD22511.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289710803|gb|EFD74819.1| cytosine/adenosine deaminase [Mycobacterium tuberculosis GM 1503] gi|328459884|gb|AEB05307.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length = 176 Score = 81.1 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 13/133 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A++ A++A P GA + + + GN E D AHAE +R L Sbjct: 25 MELAIDTARHATA----PFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 80 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE------NGTQFYTLA 120 L L T EPC MCAAA L+ +R + +G S + + + Sbjct: 81 --PELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 138 Query: 121 TCHHSPEIYPGIS 133 T P +Y G Sbjct: 139 TRPTRPSVYSGFL 151 >gi|329891051|ref|ZP_08269394.1| riboflavin biosynthesis protein ribD [Brevundimonas diminuta ATCC 11568] gi|328846352|gb|EGF95916.1| riboflavin biosynthesis protein ribD [Brevundimonas diminuta ATCC 11568] Length = 209 Score = 81.1 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 54/152 (35%), Gaps = 32/152 (21%) Query: 3 KGNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-----HAE 55 + VFM A++ A + VG V V + +++ A TA HAE Sbjct: 6 QDAVFMRRAIDLALSRMGETWPNPAVGCVLVKDGVVLAEA---------ATAPGGRPHAE 56 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPKGG 108 A+ + YVTLEPC CA ++ A + R+ A +P Sbjct: 57 EQAVPEAGEAV-----KGATAYVTLEPCGARSSGRKSCAHFLAEAGVERVVIAALDPSPF 111 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 GT+ + + G+ + + + Sbjct: 112 ASGRGTERLRHSGL----TVETGLLCEEASVL 139 >gi|31794293|ref|NP_856786.1| hypothetical protein Mb3141 [Mycobacterium bovis AF2122/97] gi|121638999|ref|YP_979223.1| hypothetical protein BCG_3139 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991491|ref|YP_002646180.1| hypothetical protein JTY_3134 [Mycobacterium bovis BCG str. Tokyo 172] gi|260188150|ref|ZP_05765624.1| hypothetical protein MtubCP_19308 [Mycobacterium tuberculosis CPHL_A] gi|260202256|ref|ZP_05769747.1| hypothetical protein MtubT4_19746 [Mycobacterium tuberculosis T46] gi|260206449|ref|ZP_05773940.1| hypothetical protein MtubK8_19337 [Mycobacterium tuberculosis K85] gi|289444678|ref|ZP_06434422.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289448793|ref|ZP_06438537.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289571322|ref|ZP_06451549.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289575826|ref|ZP_06456053.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289746924|ref|ZP_06506302.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis 02_1987] gi|289751790|ref|ZP_06511168.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289755233|ref|ZP_06514611.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis EAS054] gi|289759241|ref|ZP_06518619.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis T85] gi|294993219|ref|ZP_06798910.1| hypothetical protein Mtub2_01607 [Mycobacterium tuberculosis 210] gi|298526587|ref|ZP_07013996.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|31619888|emb|CAD96828.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] gi|121494647|emb|CAL73128.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774606|dbj|BAH27412.1| hypothetical protein JTY_3134 [Mycobacterium bovis BCG str. Tokyo 172] gi|289417597|gb|EFD14837.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289421751|gb|EFD18952.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289540257|gb|EFD44835.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289545076|gb|EFD48724.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289687452|gb|EFD54940.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis 02_1987] gi|289692377|gb|EFD59806.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289695820|gb|EFD63249.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis EAS054] gi|289714805|gb|EFD78817.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis T85] gi|298496381|gb|EFI31675.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|326902663|gb|EGE49596.1| hypothetical protein TBPG_00512 [Mycobacterium tuberculosis W-148] Length = 176 Score = 81.1 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 13/133 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A++ A++A P GA + + + GN E D AHAE +R L Sbjct: 25 MELAIDTARHATA----PFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 80 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE------NGTQFYTLA 120 L L T EPC MCAAA L+ +R + +G S + + + Sbjct: 81 --PELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 138 Query: 121 TCHHSPEIYPGIS 133 T P +Y G Sbjct: 139 TRPTRPSVYSGFL 151 >gi|146079218|ref|XP_001463726.1| deaminase [Leishmania infantum JPCM5] gi|134067813|emb|CAM66093.1| putative deaminase [Leishmania infantum JPCM5] gi|322497125|emb|CBZ32196.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 281 Score = 81.1 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 56/198 (28%), Gaps = 78/198 (39%) Query: 1 MKKG--NVFMSCALEEAQNAALRNEIPVGAVAVLNNK----------------------- 35 M + FM AL EA+ A E+PVG V + Sbjct: 1 MSVHYVDAFMRAALREAELALEEGEVPVGCALVRTDANETVYAKLALQSSDAVTNAPPHA 60 Query: 36 -------------IISRAGNRNRELKDVTAHAEILA----IRMGCRILSQEI-------- 70 I +R N+ AHAE +A I R Sbjct: 61 ASSLRCDQLVESCIAARGRNQTNLQHHALAHAEFIAVQKLIDDATRGGDGSAGASSSKAG 120 Query: 71 ----------------------------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 L + LYVT+EPC MC A + RI +++G Sbjct: 121 AGEGEKELVEDGKQNGLTSSPTTPPLSGLADYVLYVTVEPCVMCGAMLLYNRIAHVFFGC 180 Query: 103 SNPKGGGIENGTQFYTLA 120 NP+ GG + Sbjct: 181 RNPRFGGNGTVLALHASP 198 >gi|167551773|ref|ZP_02345526.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205323400|gb|EDZ11239.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 367 Score = 81.1 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V N I+ + HAE+ A+R Sbjct: 2 QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + + + F K R Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143 >gi|308232338|ref|ZP_07415761.2| hypothetical protein TMAG_03287 [Mycobacterium tuberculosis SUMu001] gi|308369958|ref|ZP_07419664.2| hypothetical protein TMBG_03264 [Mycobacterium tuberculosis SUMu002] gi|308371237|ref|ZP_07424291.2| hypothetical protein TMCG_01530 [Mycobacterium tuberculosis SUMu003] gi|308372428|ref|ZP_07428645.2| hypothetical protein TMDG_03356 [Mycobacterium tuberculosis SUMu004] gi|308373631|ref|ZP_07433119.2| hypothetical protein TMEG_02388 [Mycobacterium tuberculosis SUMu005] gi|308374775|ref|ZP_07437361.2| hypothetical protein TMFG_00317 [Mycobacterium tuberculosis SUMu006] gi|308375992|ref|ZP_07445762.2| hypothetical protein TMGG_02655 [Mycobacterium tuberculosis SUMu007] gi|308377225|ref|ZP_07441571.2| hypothetical protein TMHG_02325 [Mycobacterium tuberculosis SUMu008] gi|308378194|ref|ZP_07481857.2| hypothetical protein TMIG_02622 [Mycobacterium tuberculosis SUMu009] gi|308379415|ref|ZP_07486201.2| hypothetical protein TMJG_03286 [Mycobacterium tuberculosis SUMu010] gi|308380574|ref|ZP_07490420.2| hypothetical protein TMKG_02361 [Mycobacterium tuberculosis SUMu011] gi|308214311|gb|EFO73710.1| hypothetical protein TMAG_03287 [Mycobacterium tuberculosis SUMu001] gi|308325963|gb|EFP14814.1| hypothetical protein TMBG_03264 [Mycobacterium tuberculosis SUMu002] gi|308329489|gb|EFP18340.1| hypothetical protein TMCG_01530 [Mycobacterium tuberculosis SUMu003] gi|308333335|gb|EFP22186.1| hypothetical protein TMDG_03356 [Mycobacterium tuberculosis SUMu004] gi|308336989|gb|EFP25840.1| hypothetical protein TMEG_02388 [Mycobacterium tuberculosis SUMu005] gi|308340803|gb|EFP29654.1| hypothetical protein TMFG_00317 [Mycobacterium tuberculosis SUMu006] gi|308344671|gb|EFP33522.1| hypothetical protein TMGG_02655 [Mycobacterium tuberculosis SUMu007] gi|308348621|gb|EFP37472.1| hypothetical protein TMHG_02325 [Mycobacterium tuberculosis SUMu008] gi|308353346|gb|EFP42197.1| hypothetical protein TMIG_02622 [Mycobacterium tuberculosis SUMu009] gi|308357180|gb|EFP46031.1| hypothetical protein TMJG_03286 [Mycobacterium tuberculosis SUMu010] gi|308361131|gb|EFP49982.1| hypothetical protein TMKG_02361 [Mycobacterium tuberculosis SUMu011] Length = 161 Score = 81.1 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 13/133 (9%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A++ A++A P GA + + + GN E D AHAE +R L Sbjct: 10 MELAIDTARHATA----PFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 65 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE------NGTQFYTLA 120 L L T EPC MCAAA L+ +R + +G S + + + Sbjct: 66 --PELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 123 Query: 121 TCHHSPEIYPGIS 133 T P +Y G Sbjct: 124 TRPTRPSVYSGFL 136 >gi|209964642|ref|YP_002297557.1| riboflavin biosynthesis protein RibD [Rhodospirillum centenum SW] gi|209958108|gb|ACI98744.1| riboflavin biosynthesis protein RibD [Rhodospirillum centenum SW] Length = 379 Score = 81.1 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 51/156 (32%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL A R P VG V V +++ R H E A+ Sbjct: 14 DQDRAHMRAALTLAARGLGRVWPNPSVGCVLVREGRVVGRG----VTGAGGRPHGETEAL 69 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R E YV+LEPC C A+ A + R+ +P G Sbjct: 70 RQAG-----EQARGATAYVSLEPCNHHGRTPPCTEALMAAGVARVVVACEDPDPRVSGGG 124 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ E ++++ FF R Sbjct: 125 LARLRAAGL----EVASGLLEAEAQELNAGFFLRIR 156 >gi|238911451|ref|ZP_04655288.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 367 Score = 81.1 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V N I+ + HAE+ A+R Sbjct: 2 QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + + + F K R Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143 >gi|66824069|ref|XP_645389.1| hypothetical protein DDB_G0272030 [Dictyostelium discoideum AX4] gi|60473505|gb|EAL71449.1| hypothetical protein DDB_G0272030 [Dictyostelium discoideum AX4] Length = 225 Score = 81.1 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 14/140 (10%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 + +M A++ A + A V N ++ G H E+ AI Sbjct: 52 HSKYMQIAIDIAIENNSK----FAAAIVHKNGTVACTG--VNVGGSRMYHGEVKAIMNCT 105 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG--------IENGTQ 115 + Q + LY T EPC MC+AAI + +++ + + +++ Sbjct: 106 TMYQQATWEDYSLYTTGEPCPMCSAAIMWTKFQKVIFASYVSNMYCERCFNQLPMDSNEI 165 Query: 116 FYTLATCHHSPEIYPGISEQ 135 F +H+ + G+ + Sbjct: 166 FKLGYGINHNIVVIGGVLDN 185 >gi|213163224|ref|ZP_03348934.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 367 Score = 81.1 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V N I+ + HAE+ A+R Sbjct: 2 QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + + + F K R Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143 >gi|23008993|ref|ZP_00050209.1| COG1985: Pyrimidine reductase, riboflavin biosynthesis [Magnetospirillum magnetotacticum MS-1] Length = 284 Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 47/140 (33%), Gaps = 21/140 (15%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL + R VGAV V +I+ +A HAE LA+ M Sbjct: 19 MRLALALGRRNLGRTWPNPSVGAVVVAEGRIVGQA----VTAPGGRPHAEPLALAMAGEA 74 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 LYVTLEPC C A + IRR+ +P G Sbjct: 75 A-----RGATLYVTLEPCSHYGRTPPCTEATIASGIRRVVTAIEDPDPRVAGRGHAQLRA 129 Query: 120 ATCHHSPEIYPGISEQRSRQ 139 A + G+ + + + Sbjct: 130 AGL----TVETGLLREEAAR 145 >gi|323357080|ref|YP_004223476.1| pyrimidine reductase, riboflavin biosynthesis [Microbacterium testaceum StLB037] gi|323273451|dbj|BAJ73596.1| pyrimidine reductase, riboflavin biosynthesis [Microbacterium testaceum StLB037] Length = 343 Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 20/144 (13%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M AL+ A+ VGAV + +I++ +R TAHAE+ A+ L Sbjct: 10 MRRALQLARRGPRGLNPQVGAVILSPAGEILAEGYHR----GAGTAHAEVDALSQ----L 61 Query: 67 SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + VTLEPC CA A+ A + R+ + +P + Sbjct: 62 APGAARGATAVVTLEPCNHTGRTGPCAVALIEAGVARVVFALDDPTDAASGGAERLRAA- 120 Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144 ++ G E+ + ++ D+ Sbjct: 121 ----GVDVEQGPEEESAEALVHDW 140 >gi|168232389|ref|ZP_02657447.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194470692|ref|ZP_03076676.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194457056|gb|EDX45895.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333401|gb|EDZ20165.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 367 Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V N I+ + HAE+ A+R Sbjct: 2 QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + + + F K R Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143 >gi|56414429|ref|YP_151504.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|168818973|ref|ZP_02830973.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|197363349|ref|YP_002142986.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|200389971|ref|ZP_03216582.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|56128686|gb|AAV78192.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094826|emb|CAR60359.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|199602416|gb|EDZ00962.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205344221|gb|EDZ30985.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320084692|emb|CBY94483.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 367 Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V N I+ + HAE+ A+R Sbjct: 2 QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + + + F K R Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143 >gi|120612202|ref|YP_971880.1| riboflavin biosynthesis protein RibD [Acidovorax citrulli AAC00-1] gi|120590666|gb|ABM34106.1| riboflavin biosynthesis protein RibD [Acidovorax citrulli AAC00-1] Length = 377 Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 39/149 (26%), Positives = 57/149 (38%), Gaps = 19/149 (12%) Query: 8 MSCALEEAQNAALRNEI-P-VGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCR 64 M AL+ A++ R P VG V V + II + + HAE++A+R Sbjct: 14 MQLALQLAEDGLYRTSPNPRVGCVLVNAGQQIIGQGSTQRAGG----PHAEVMALRDARA 69 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 YVTLEPC+ C A+ A I R+ ++P G + Sbjct: 70 RGHATH--GATAYVTLEPCSHHGRTGPCCDALVEAGIARVVASLADPNPLVAGQGFERLR 127 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ PG SR++ FF Sbjct: 128 GAGV--QVEVGPG--AAASRELNIGFFSR 152 >gi|78046481|ref|YP_362656.1| hypothetical protein XCV0925 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034911|emb|CAJ22556.1| conserved hypothetical protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 186 Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 17/149 (11%) Query: 10 CALEEAQ-NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A+E ++ N R+ P GAV +++II+ A NR AHAE +A + + L Sbjct: 33 LAIELSRMNVRERSGGPFGAVVFGPDHRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQ 92 Query: 68 QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA--- 120 L +V L + +PC C A A I RL GA + TQF Sbjct: 93 TPRLNDVLSPVALATSAQPCCQCYGATVWAGIDRLLIGARADDVMAL---TQFDEGPLPA 149 Query: 121 -----TCHHSPEIYPGISEQRSRQIIQDF 144 E+ + ++ +++++ Sbjct: 150 DWVGELSRRGIEVVRDVLRDQACAVLRNY 178 >gi|288800423|ref|ZP_06405881.1| riboflavin biosynthesis protein RibD [Prevotella sp. oral taxon 299 str. F0039] gi|288332636|gb|EFC71116.1| riboflavin biosynthesis protein RibD [Prevotella sp. oral taxon 299 str. F0039] Length = 341 Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 20/152 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M ++ A N P VG+V V++ +II + AHAE+ A Sbjct: 32 THERYMQRCIDLALNG-KEGAKPNPMVGSVIVVDGRIIGEGYHIEYGK----AHAEVNAF 86 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + +LP+ LYV LEPC CA I ++++ G +P G Sbjct: 87 -ASVDAKDEHLLPKATLYVNLEPCSHFGKTPPCADLIISKGVKKVVVGCVDPYSEVRGRG 145 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A ++ G+ E+ + + FF Sbjct: 146 IERLRKAG----VKVLVGVLEKECLFLNR-FF 172 >gi|294885496|ref|XP_002771343.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239874872|gb|EER03159.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 76 Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 30/56 (53%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 FM AL AQ A +E+PVG V N +++ AGN ++ T HAE++A Sbjct: 18 DDKRFMRLALAAAQEAYDTDEVPVGCAFVSNGVVLATAGNETNHTRNATRHAELVA 73 >gi|16759393|ref|NP_455010.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142835|ref|NP_806177.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213427850|ref|ZP_03360600.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213650168|ref|ZP_03380221.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855380|ref|ZP_03383620.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289825059|ref|ZP_06544411.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25331497|pir||AH0553 riboflavin biosynthesis protein RibD [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501684|emb|CAD08872.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Typhi] gi|29138467|gb|AAO70037.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 367 Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V N I+ + HAE+ A+R Sbjct: 2 QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + + + F K R Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143 >gi|15805190|ref|NP_293877.1| riboflavin-specific deaminase [Deinococcus radiodurans R1] gi|6457821|gb|AAF09742.1|AE001878_1 riboflavin-specific deaminase [Deinococcus radiodurans R1] Length = 357 Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 54/149 (36%), Gaps = 25/149 (16%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKI----ISRAGNRNRELKDVTAHAEIL 57 +M AL EA R PVG V V + +I + R + HAE+ Sbjct: 8 DAEYMQLALNEAAKGLGRTSPNPPVGCVIVRDGEIASEIVGRGFHPKAGE----PHAEVF 63 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+R E YVTLEPC CA A+ A + R+ A +P Sbjct: 64 ALREAG-----ERARGATAYVTLEPCSHDGRTPPCADALIAAGVARVVVAAGDPNPQVNG 118 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQI 140 G + A E+ G+ E + + Sbjct: 119 RGLEKLRAAG----IEVATGVLEAAAVRQ 143 >gi|168261151|ref|ZP_02683124.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205350075|gb|EDZ36706.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 367 Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V N I+ + HAE+ A+R Sbjct: 2 QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + + + F K R Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143 >gi|62179027|ref|YP_215444.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62126660|gb|AAX64363.1| pyrimidine deaminase/reductase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322713488|gb|EFZ05059.1| Riboflavin biosynthesis protein ribD [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 367 Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V N I+ + HAE+ A+R Sbjct: 2 QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGAKAKGAT-----AYVTLEPCSHHGQTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + + + F K R Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143 >gi|297196280|ref|ZP_06913678.1| cytidine/deoxycytidylate deaminase [Streptomyces pristinaespiralis ATCC 25486] gi|297153148|gb|EDY66892.2| cytidine/deoxycytidylate deaminase [Streptomyces pristinaespiralis ATCC 25486] Length = 140 Score = 80.7 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 1/94 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + +E A A + P G+V V + ++ + NR L D T H E R + Sbjct: 14 LRRCVELAAEAVEAGDEPFGSVLVDGDGRVRAEDRNRETSLADQTQHPEFALARWAAEHM 73 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + + ++ + E C MCAAA + R+ Y Sbjct: 74 TAQERRAATVFTSGEHCPMCAAAHGWVGLGRIVY 107 >gi|93279919|pdb|2G84|A Chain A, Cytidine And Deoxycytidylate Deaminase Zinc-Binding Region From Nitrosomonas Europaea. gi|93279920|pdb|2G84|B Chain B, Cytidine And Deoxycytidylate Deaminase Zinc-Binding Region From Nitrosomonas Europaea Length = 197 Score = 80.7 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 52/148 (35%), Gaps = 11/148 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M LE + + P A + +I+ NR + AHAEILA+ + Sbjct: 32 MGYVLELVRANIAADGGPFAAAVFERDSGLLIAAGTNRVVPGRCSAAHAEILALSLAQAK 91 Query: 66 LSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L P +L + EPC MC A+ + +R L A + I Sbjct: 92 LDTHDLSADGLPACELVTSAEPCVMCFGAVIWSGVRSLVCAARSDDVEAIGFDEGPRPEN 151 Query: 121 TCH----HSPEIYPGISEQRSRQIIQDF 144 + G+ + +++++ Sbjct: 152 WMGGLEARGITVTTGLLRDAACALLREY 179 >gi|284991868|ref|YP_003410422.1| CMP/dCMP deaminase protein [Geodermatophilus obscurus DSM 43160] gi|284065113|gb|ADB76051.1| CMP/dCMP deaminase zinc-binding protein [Geodermatophilus obscurus DSM 43160] Length = 157 Score = 80.7 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 2/101 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 + + A+ A + P G+V V ++ N D T H E R Sbjct: 6 DLTHLRRCVALARAALEAGDEPFGSVLVDAEGRVRFEDSNHV-AGGDATRHPEFAIARWA 64 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + ++ E +Y + E C MCAAA + R+ Y +S Sbjct: 65 AQHMTPEERAAATVYTSGEHCPMCAAAHGWVGLGRIVYASS 105 >gi|254562342|ref|YP_003069437.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Methylobacterium extorquens DM4] gi|254269620|emb|CAX25591.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase [Methylobacterium extorquens DM4] Length = 376 Score = 80.7 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 46/140 (32%), Gaps = 21/140 (15%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL + R VGAV V +I+ +A HAE LA+ M Sbjct: 19 MRLALALGRRNLGRTWPNPSVGAVVVAEGRIVGQAVTAVGGR----PHAEPLALAMAGEA 74 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 LYVTLEPC C A A I R+ +P G Sbjct: 75 A-----RGATLYVTLEPCSHHGRTPPCTDATIAAGIARVVTAIEDPDPRVAGRGHAGLRA 129 Query: 120 ATCHHSPEIYPGISEQRSRQ 139 A + G+ + + + Sbjct: 130 AG----ITVETGLLREEAAR 145 >gi|240139918|ref|YP_002964395.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino) uracil reductase [Methylobacterium extorquens AM1] gi|240009892|gb|ACS41118.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino) uracil reductase [Methylobacterium extorquens AM1] Length = 376 Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 46/140 (32%), Gaps = 21/140 (15%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL + R VGAV V +I+ +A HAE LA+ M Sbjct: 19 MRLALALGRRNLGRTWPNPSVGAVVVAEGRIVGQAVTAVGGR----PHAEPLALAMAGEA 74 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 LYVTLEPC C A A I R+ +P G Sbjct: 75 A-----RGATLYVTLEPCSHHGRTPPCTDATIAAGIARVVTAIEDPDPRVAGRGHAGLRA 129 Query: 120 ATCHHSPEIYPGISEQRSRQ 139 A + G+ + + + Sbjct: 130 AG----ITVETGLLREEAAR 145 >gi|121605806|ref|YP_983135.1| riboflavin biosynthesis protein RibD [Polaromonas naphthalenivorans CJ2] gi|120594775|gb|ABM38214.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Polaromonas naphthalenivorans CJ2] Length = 370 Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 54/152 (35%), Gaps = 18/152 (11%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M A+ A A P VG V + ++ + + HAEI+A+R Sbjct: 7 DTEMMPRAVALALAAMRITSPNPRVGCVLTSSGDVLGQGH--TQAAGHP--HAEIMALRD 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC+ C A+ A I+++ ++P G + Sbjct: 63 AAAQGHS--VVGATAYVTLEPCSHHGRTGPCCDALIAAGIKKIVASIADPNPLVSGQGFE 120 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G SR++ FF Sbjct: 121 RLRAAG----IEVEVGPGAAESRELNIGFFSR 148 >gi|237803160|ref|YP_002888354.1| Riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis B/Jali20/OT] gi|231274394|emb|CAX11189.1| Riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis B/Jali20/OT] Length = 375 Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 23/150 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++ FM A+ + + P VG V V N +I ++ + HAE+ A Sbjct: 6 EQQLFFMRKAVALGEKGRIFA-PPNPWVGCVIVKNGCVIGEGWHQGI----GSPHAEVCA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++ + L +++VTLEPC C + +++ +Y G +P + Sbjct: 61 VQ-----DQKCSLEGAEVFVTLEPCCHFGRTPPCVDLLIKSKVAAVYVGLLDPDPRVCKK 115 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 G A +Y G+ Q ++ +Q Sbjct: 116 GVARLQAAGIP----VYVGVGSQEAKTSLQ 141 >gi|16763796|ref|NP_459411.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161615396|ref|YP_001589361.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167992266|ref|ZP_02573364.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168240239|ref|ZP_02665171.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194442362|ref|YP_002039658.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449088|ref|YP_002044451.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197264648|ref|ZP_03164722.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|224582254|ref|YP_002636052.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|16418920|gb|AAL19370.1| pyrimidine deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161364760|gb|ABX68528.1| hypothetical protein SPAB_03167 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401025|gb|ACF61247.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407392|gb|ACF67611.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197242903|gb|EDY25523.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205329484|gb|EDZ16248.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205339872|gb|EDZ26636.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|224466781|gb|ACN44611.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261245699|emb|CBG23495.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992127|gb|ACY87012.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157027|emb|CBW16510.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911449|dbj|BAJ35423.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225143|gb|EFX50204.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323128735|gb|ADX16165.1| Riboflavin biosynthesis protein ribD [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332987364|gb|AEF06347.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 367 Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V N I+ + HAE+ A+R Sbjct: 2 QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + + + F K R Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143 >gi|168237529|ref|ZP_02662587.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734520|ref|YP_002113449.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194710022|gb|ACF89243.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197289553|gb|EDY28916.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 367 Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 54/155 (34%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V N I+ + HAE+ A+R Sbjct: 2 QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + G+ + + + F K R Sbjct: 113 YRLQQSG----IAVSHGLMMSEAEALNKGFLKRMR 143 >gi|163852584|ref|YP_001640627.1| riboflavin biosynthesis protein RibD [Methylobacterium extorquens PA1] gi|163664189|gb|ABY31556.1| riboflavin biosynthesis protein RibD [Methylobacterium extorquens PA1] Length = 371 Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 46/140 (32%), Gaps = 21/140 (15%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL + R VGAV V +I+ +A HAE LA+ M Sbjct: 14 MRLALALGRRNLGRTWPNPSVGAVVVAEGRIVGQAVTAVGGR----PHAEPLALAMAGEA 69 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 LYVTLEPC C A A I R+ +P G Sbjct: 70 AH-----GATLYVTLEPCSHHGRTPPCTDATIAAGIARVVTAIEDPDPRVAGRGHAGLRA 124 Query: 120 ATCHHSPEIYPGISEQRSRQ 139 A + G+ + + + Sbjct: 125 AG----ITVETGLLREEAAR 140 >gi|30248078|ref|NP_840148.1| cytidine and deoxycytidylate deaminase zinc-binding region [Nitrosomonas europaea ATCC 19718] gi|30179963|emb|CAD83958.1| Cytidine and deoxycytidylate deaminase zinc-binding region [Nitrosomonas europaea ATCC 19718] Length = 193 Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 52/148 (35%), Gaps = 11/148 (7%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M LE + + P A + +I+ NR + AHAEILA+ + Sbjct: 30 MGYVLELVRANIAADGGPFAAAVFERDSGLLIAAGTNRVVPGRCSAAHAEILALSLAQAK 89 Query: 66 LSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 L L P +L + EPC MC A+ + +R L A + I Sbjct: 90 LDTHDLSADGLPACELVTSAEPCVMCFGAVIWSGVRSLVCAARSDDVEAIGFDEGPRPEN 149 Query: 121 TCH----HSPEIYPGISEQRSRQIIQDF 144 + G+ + +++++ Sbjct: 150 WMGGLEARGITVTTGLLRDAACALLREY 177 >gi|198275609|ref|ZP_03208140.1| hypothetical protein BACPLE_01778 [Bacteroides plebeius DSM 17135] gi|198271238|gb|EDY95508.1| hypothetical protein BACPLE_01778 [Bacteroides plebeius DSM 17135] Length = 144 Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVTA--- 52 +M AL A+N+ + VGA+ V + IIS N + VT Sbjct: 12 DKRYMRMALIWAENSYCQR-RQVGALIVKDKMIISDGYNGTPAGFENVCEDENGVTRPYV 70 Query: 53 -HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + +YVT PC CA I A I+R+ Y Sbjct: 71 LHAEANAITKIARSSNSS--EGATMYVTASPCIECAKLIIQAGIKRVVYA 118 >gi|114765495|ref|ZP_01444605.1| riboflavin biosynthesis protein RibD [Pelagibaca bermudensis HTCC2601] gi|114542205|gb|EAU45236.1| riboflavin biosynthesis protein RibD [Roseovarius sp. HTCC2601] Length = 350 Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 44/131 (33%), Gaps = 29/131 (22%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTA-----HAEILAIRMGCRILSQEILPEVDLYVTL 80 VG V V + +++ R TA HAE A+ YVTL Sbjct: 10 VGCVIVKDGRVVGRG---------ATAPGGRPHAEPQALAQAGEAA-----RGATAYVTL 55 Query: 81 EPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134 EPC CA A+ + + R+ ++ G H E+ G+ Sbjct: 56 EPCSHHGKTPPCAEALVKSGVARVVAPLADNDARVSGQGFAHLRK----HGIEVTTGVLA 111 Query: 135 QRSRQIIQDFF 145 + + + FF Sbjct: 112 EDAARDHAGFF 122 >gi|297748861|gb|ADI51407.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Chlamydia trachomatis D-EC] gi|297749741|gb|ADI52419.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Chlamydia trachomatis D-LC] Length = 400 Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 23/150 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++ FM A+ + + P VG V V N +I ++ + HAE+ A Sbjct: 31 EQQLFFMRKAVALGEKGRIFA-PPNPWVGCVIVKNGCVIGEGWHQGI----GSPHAEVCA 85 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++ + L +++VTLEPC C + +++ +Y G +P + Sbjct: 86 VQ-----DQKCSLEGAEVFVTLEPCCHFGRTPPCVDLLIKSKVAAVYVGLLDPDPRVCKK 140 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 G A +Y G+ Q ++ +Q Sbjct: 141 GVARLQAAGIP----VYVGVGSQEAKTSLQ 166 >gi|108799736|ref|YP_639933.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium sp. MCS] gi|119868846|ref|YP_938798.1| CMP/dCMP deaminase, zinc-binding [Mycobacterium sp. KMS] gi|126435377|ref|YP_001071068.1| CMP/dCMP deaminase, zinc-binding [Mycobacterium sp. JLS] gi|108770155|gb|ABG08877.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium sp. MCS] gi|119694935|gb|ABL92008.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium sp. KMS] gi|126235177|gb|ABN98577.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium sp. JLS] Length = 159 Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 2/103 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 + ++ A+ A + P G++ V + ++ NR D T H E R Sbjct: 5 DSDLEHLRRCVDLAREALDAGDEPFGSLLVDSAGQVRFADHNRV-SGGDHTRHPEFAIAR 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L +Y + E C MCAAA + + R+ Y S Sbjct: 64 WAAEHLDPSERAAATVYTSGEHCPMCAAAHAWVGLGRIVYATS 106 >gi|218531424|ref|YP_002422240.1| riboflavin biosynthesis protein RibD [Methylobacterium chloromethanicum CM4] gi|218523727|gb|ACK84312.1| riboflavin biosynthesis protein RibD [Methylobacterium chloromethanicum CM4] Length = 376 Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 46/140 (32%), Gaps = 21/140 (15%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL + R VGAV V +I+ +A HAE LA+ M Sbjct: 19 MRLALALGRRNLGRTWPNPSVGAVVVAEGRIVGQAVTAVGGR----PHAEPLALAMAGEA 74 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 LYVTLEPC C A A I R+ +P G Sbjct: 75 A-----RGATLYVTLEPCSHHGRTPPCTDATIAAGIARVVTAIEDPDPRVAGRGHAGLRA 129 Query: 120 ATCHHSPEIYPGISEQRSRQ 139 A + G+ + + + Sbjct: 130 AG----ITVETGLLREEAAR 145 >gi|15605463|ref|NP_220249.1| riboflavin deaminase [Chlamydia trachomatis D/UW-3/CX] gi|237805081|ref|YP_002889235.1| Riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis B/TZ1A828/OT] gi|255311561|ref|ZP_05354131.1| Riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis 6276] gi|255317862|ref|ZP_05359108.1| Riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis 6276s] gi|13633735|sp|O84735|RIBD_CHLTR RecName: Full=Riboflavin biosynthesis protein RibD; Includes: RecName: Full=Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase; Includes: RecName: Full=5-amino-6-(5-phosphoribosylamino)uracil reductase; AltName: Full=HTP reductase gi|3329187|gb|AAC68325.1| Riboflavin Deaminase [Chlamydia trachomatis D/UW-3/CX] gi|231273381|emb|CAX10296.1| Riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis B/TZ1A828/OT] gi|296436276|gb|ADH18450.1| Riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis G/9768] gi|296437205|gb|ADH19375.1| Riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis G/11222] gi|296438136|gb|ADH20297.1| Riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis G/11074] gi|297140637|gb|ADH97395.1| Riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) [Chlamydia trachomatis G/9301] Length = 375 Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 23/150 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++ FM A+ + + P VG V V N +I ++ + HAE+ A Sbjct: 6 EQQLFFMRKAVALGEKGRIFA-PPNPWVGCVIVKNGCVIGEGWHQGI----GSPHAEVCA 60 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++ + L +++VTLEPC C + +++ +Y G +P + Sbjct: 61 VQ-----DQKCSLEGAEVFVTLEPCCHFGRTPPCVDLLIKSKVAAVYVGLLDPDPRVCKK 115 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 G A +Y G+ Q ++ +Q Sbjct: 116 GVARLQAAGIP----VYVGVGSQEAKTSLQ 141 >gi|218506245|ref|ZP_03504123.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase protein [Rhizobium etli Brasil 5] Length = 137 Score = 80.7 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 46/142 (32%), Gaps = 21/142 (14%) Query: 3 KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM+ A+ ++ VG + V + I+ +A HAE A+ Sbjct: 6 DDEGFMAAAIRLSRRHLGRTATNPSVGCLIVRDGVIVGQA----VTAIGGRPHAEPQALA 61 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 ++ YVTLEPC CA A+ + R+ ++P G Sbjct: 62 EAGQLA-----RGATAYVTLEPCSHHGKTPPCAEALIAYGVARVVISVTDPDPRVSGRGI 116 Query: 115 QFYTLATCHHSPEIYPGISEQR 136 A E+ G E Sbjct: 117 TMLRDAG----IEVDTGALEAE 134 >gi|152990173|ref|YP_001355895.1| riboflavin biosynthesis protein RibG [Nitratiruptor sp. SB155-2] gi|151422034|dbj|BAF69538.1| riboflavin biosynthesis protein RibG [Nitratiruptor sp. SB155-2] Length = 333 Score = 80.7 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 44/175 (25%), Positives = 67/175 (38%), Gaps = 39/175 (22%) Query: 4 GNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 N FM AL+EA VGAV +NN IIS+ + K HAE+ AI+ Sbjct: 5 DNFFMDIALQEAWRYQGLTYPNPAVGAVVAINNCIISKGAH----TKAGAPHAEVEAIKN 60 Query: 62 GCRIL----------------------SQEILPEVDLYVTLEPC------TMCAAAISLA 93 L ++++ +YVTLEPC C+ I Sbjct: 61 AYYTLTGDEHVLHLQDALELHEYLVANAKDLFHNATIYVTLEPCNHFGKTPPCSLLIKKL 120 Query: 94 RIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 +R+ +P G F + E+ GI E+R++ +I+ F + R Sbjct: 121 GFQRVVIALKDPNEEAAG-GASFLR----NCGIEVDIGIQEERAKVLIEPFLQWR 170 >gi|256159495|ref|ZP_05457263.1| riboflavin biosynthesis protein RibD [Brucella ceti M490/95/1] gi|256254781|ref|ZP_05460317.1| riboflavin biosynthesis protein RibD [Brucella ceti B1/94] gi|261221961|ref|ZP_05936242.1| riboflavin biosynthesis protein RibD [Brucella ceti B1/94] gi|265997924|ref|ZP_06110481.1| riboflavin biosynthesis protein RibD [Brucella ceti M490/95/1] gi|260920545|gb|EEX87198.1| riboflavin biosynthesis protein RibD [Brucella ceti B1/94] gi|262552392|gb|EEZ08382.1| riboflavin biosynthesis protein RibD [Brucella ceti M490/95/1] Length = 373 Score = 80.3 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 47/145 (32%), Gaps = 21/145 (14%) Query: 3 KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM + A+ VG + V + I+ R HAE A+ Sbjct: 14 NDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQALA 69 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA A+ + + R+ A++P G Sbjct: 70 EVGEAA-----RGATAYVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSRKGF 124 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139 A E+ PGI +++ Sbjct: 125 AILREAG----IEVVPGILSEQAAD 145 >gi|228469568|ref|ZP_04054561.1| riboflavin biosynthesis protein RibD [Porphyromonas uenonis 60-3] gi|228308918|gb|EEK17593.1| riboflavin biosynthesis protein RibD [Porphyromonas uenonis 60-3] Length = 338 Score = 80.3 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 56/151 (37%), Gaps = 21/151 (13%) Query: 4 GNVFMSCALEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++M L+ A A + VG+V V +KII + HAE++A Sbjct: 10 DEIYMQRCLQLA--ALAQGRTSPNPMVGSVIVYKDKIIGEGYHHYAGA----PHAEVMAW 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R L ++ E YV+LEPC CA I+ R R+ +P G Sbjct: 64 RSVPEELRG-LVGEATWYVSLEPCAHYGKTPPCAELIAGLRPARVVVAMLDPFAKVDGRG 122 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G EQ + + + F Sbjct: 123 VARLREAG----IEVSIGCLEQAAIALNRHF 149 >gi|257067270|ref|YP_003153525.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810] gi|256558088|gb|ACU83935.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810] Length = 163 Score = 80.3 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 41/102 (40%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + ++ A+ A + P G++ V + A + D T H E R Sbjct: 9 ETDRRHLRRCVDLAREALDAGDEPFGSLLVDADGTERFADRNRVQGGDHTRHPEFEIARW 68 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 LS + +Y + E C MCAAA + + R+ Y +S Sbjct: 69 AANHLSPQERARATVYTSGEHCPMCAAAHAWVGLGRIVYASS 110 >gi|114705235|ref|ZP_01438143.1| hypothetical protein FP2506_09861 [Fulvimarina pelagi HTCC2506] gi|114540020|gb|EAU43140.1| hypothetical protein FP2506_09861 [Fulvimarina pelagi HTCC2506] Length = 164 Score = 80.3 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 2/101 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 V ++ +E A+ A P G+ V N ++ NR D TAH E R Sbjct: 12 DRVHLARCVELARQAVEEGHKPFGSRLVAGNGTVLKEDYNRT-GDGDPTAHPEFALARWA 70 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + E +Y + E C MCA A + + R+ YG+S Sbjct: 71 GLNMEPSERAEATVYTSGEHCPMCATAHGIVGLGRIVYGSS 111 >gi|66812330|ref|XP_640344.1| hypothetical protein DDB_G0282171 [Dictyostelium discoideum AX4] gi|60468358|gb|EAL66365.1| hypothetical protein DDB_G0282171 [Dictyostelium discoideum AX4] Length = 227 Score = 80.3 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 15/142 (10%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 M A++ A + GA N ++ N H EI AI Sbjct: 54 HETNMRVAIDV-TKAINQK---FGAAIFHSNGTLMCTGVNT--GQTSAILHGEIRAILNC 107 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA-- 120 + + LY T EPC MC+AAI A+ ++ + + Q A Sbjct: 108 SELYGKTTWEGYYLYTTGEPCPMCSAAIMWAKFDKVIFASYVSNMYCERCFNQLPMDAVE 167 Query: 121 ------TCHHSPEIYPGISEQR 136 + + + G+ ++ Sbjct: 168 IFKLGYGINKNTVVIGGVLQEE 189 >gi|319784162|ref|YP_004143638.1| riboflavin biosynthesis protein RibD [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170050|gb|ADV13588.1| riboflavin biosynthesis protein RibD [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 371 Score = 80.3 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 50/150 (33%), Gaps = 25/150 (16%) Query: 4 GNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNK----IISRAGNRNRELKDVTAHAEIL 57 FM+ AL ++ A P VG + V ++ I+ HAE Sbjct: 10 DRRFMAAALRLSRKNAGRTATNPSVGTLIVRDDGNGPMIVGTGVTAVGGR----PHAETE 65 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ + YVTLEPC CA A+ A + R+ AS+P Sbjct: 66 ALAEAGDLA-----RGATAYVTLEPCAHHGRTPPCANALVNAGVARVVGAASDPDSRVSG 120 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQII 141 G A E+ + + + + Sbjct: 121 KGYAILRAAG----VEVVEKVLAAEAAEQM 146 >gi|317124749|ref|YP_004098861.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Intrasporangium calvum DSM 43043] gi|315588837|gb|ADU48134.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase [Intrasporangium calvum DSM 43043] Length = 378 Score = 80.3 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 51/141 (36%), Gaps = 22/141 (15%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ A+ + + P VG V V ++++ +R T HA Sbjct: 17 MLRAIALAERSPWPDPNPRVGCVIVDRAGEVVAEGWHR----GAGTPHA-----EAAALA 67 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L+ E YV+LEPC C+ A+ A + R+ Y ++P G Sbjct: 68 LAGERARGGTAYVSLEPCAHRGRTGPCSDALVEAGVARVVYAQADPNAEASG-GADVLRA 126 Query: 120 ATCHHSPEIYPGISEQRSRQI 140 A +I G+ + + Sbjct: 127 AG----VQIVGGLLADEAAAL 143 >gi|54297135|ref|YP_123504.1| riboflavin biosynthesis protein RibD [Legionella pneumophila str. Paris] gi|53750920|emb|CAH12331.1| Riboflavin biosynthesis protein RibD [Legionella pneumophila str. Paris] Length = 357 Score = 80.3 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 36/111 (32%), Positives = 47/111 (42%), Gaps = 17/111 (15%) Query: 4 GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ ALE+A+ VGAVAV N II++A +R T HAE L + Sbjct: 2 HEQFLLAALEQAKLGRGFCAPNPSVGAVAVQNGNIIAQAWHR----GAGTPHAEQLLLSQ 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106 P V LYVTLEPC C AI I+ + + +P Sbjct: 58 -----IPPQTPGVTLYVTLEPCNHWGKTPPCVDAIINHGIQEVVFSYFDPN 103 >gi|171059615|ref|YP_001791964.1| riboflavin biosynthesis protein RibD [Leptothrix cholodnii SP-6] gi|170777060|gb|ACB35199.1| riboflavin biosynthesis protein RibD [Leptothrix cholodnii SP-6] Length = 416 Score = 80.3 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 47/129 (36%), Gaps = 17/129 (13%) Query: 26 VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83 VG V V +++ + HAE++A+R L YVTLEPC Sbjct: 49 VGCVIVDAQGRLLGSGHTQQAGG----PHAEVMAMRTARAAGHS--LIGATAYVTLEPCA 102 Query: 84 -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 CA A+ A ++R+ ++P G A ++ G+ + + Sbjct: 103 HHGRTPPCADALIEAGLKRVVAAITDPFPLVAGQGLARLAAAG----IQVEQGLMAEAAT 158 Query: 139 QIIQDFFKE 147 I FF Sbjct: 159 AINIGFFSR 167 >gi|148358764|ref|YP_001249971.1| riboflavin biosynthesis protein RibD [Legionella pneumophila str. Corby] gi|296106809|ref|YP_003618509.1| riboflavin biosynthesis protein [Legionella pneumophila 2300/99 Alcoy] gi|148280537|gb|ABQ54625.1| riboflavin biosynthesis protein RibD [Legionella pneumophila str. Corby] gi|295648710|gb|ADG24557.1| riboflavin biosynthesis protein [Legionella pneumophila 2300/99 Alcoy] Length = 357 Score = 80.3 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 36/111 (32%), Positives = 47/111 (42%), Gaps = 17/111 (15%) Query: 4 GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ ALE+A+ VGAVAV N II++A +R T HAE L + Sbjct: 2 HEQFLLAALEQAKLGRGFCAPNPSVGAVAVQNGNIIAQAWHR----GAGTPHAEQLLLSQ 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106 PEV LY+TLEPC C AI I + + +P Sbjct: 58 -----IPPQTPEVTLYITLEPCNHWGKTPPCVDAIINHGIEEVVFAYFDPN 103 >gi|126733197|ref|ZP_01748944.1| riboflavin biosynthesis protein RibD [Roseobacter sp. CCS2] gi|126716063|gb|EBA12927.1| riboflavin biosynthesis protein RibD [Roseobacter sp. CCS2] Length = 369 Score = 80.3 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 50/146 (34%), Gaps = 21/146 (14%) Query: 2 KKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + FM+ AL + R VG V V + I+ R HAE +A+ Sbjct: 4 QADARFMALALMLGRRGMGRVWPNPAVGCVIVNDCNIVGRGW----TADGGRPHAEAIAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 +YVTLEPC C+ A+ A + R+ A +P G Sbjct: 60 AQAGSAA-----DGATVYVTLEPCAHHGKTPPCSNALIKANVARVVIAADDPDERVNGRG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQ 139 A ++ G+ + + + Sbjct: 115 IAMLRDAG----VQVDCGVGNKAAAR 136 >gi|282881525|ref|ZP_06290195.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella timonensis CRIS 5C-B1] gi|281304636|gb|EFA96726.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella timonensis CRIS 5C-B1] Length = 140 Score = 80.3 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------RNRELKDVTA--- 52 ++ A A+N+ + VGA+ V + +IIS N + + + VT Sbjct: 11 DQRYLRMARIWAENSYCQR-RQVGALVVKDQRIISDGYNGTPSGFENQCEDEQGVTHPYV 69 Query: 53 -HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC CA I A I+R+ YG Sbjct: 70 LHAEANAITKLARSSNNSD--GATLYVTASPCIECAKLIIQAGIKRVVYG 117 >gi|229494376|ref|ZP_04388139.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Rhodococcus erythropolis SK121] gi|229318738|gb|EEN84596.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Rhodococcus erythropolis SK121] Length = 159 Score = 80.3 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 2/102 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + +E A A + P G+V + ++ NR D T H E R + L Sbjct: 9 LRRCVELATEALDAGDEPFGSVLAAADGTFLAEDRNR-IAGGDNTRHPEFELARWAAQYL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 + + ++ + E C MC+AA + + R+ Y S+ + G Sbjct: 68 TPDERSTATVFTSGEHCAMCSAAHAWVGLGRIVYICSSAQLG 109 >gi|302534476|ref|ZP_07286818.1| predicted protein [Streptomyces sp. C] gi|302443371|gb|EFL15187.1| predicted protein [Streptomyces sp. C] Length = 225 Score = 80.3 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 41/115 (35%), Gaps = 15/115 (13%) Query: 9 SCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNREL-----------KDVTAHAEI 56 LE A A + VGAV +++R N E AHAE+ Sbjct: 21 RRVLELAYEALAAGGLAVGAVLTDPAGVVLARGRNEAYESPGEGTGTGPLRGTPLAHAEM 80 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ + L L+ T EPC MCAAA + + Y A +P Sbjct: 81 NAL---GAARTGWDLGSATLWSTQEPCAMCAAAAGFTGVGAVRYLAPDPWALADG 132 >gi|54294122|ref|YP_126537.1| riboflavin biosynthesis protein RibD [Legionella pneumophila str. Lens] gi|53753954|emb|CAH15425.1| Riboflavin biosynthesis protein RibD [Legionella pneumophila str. Lens] Length = 357 Score = 80.0 bits (197), Expect = 9e-14, Method: Composition-based stats. Identities = 39/111 (35%), Positives = 50/111 (45%), Gaps = 17/111 (15%) Query: 4 GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ ALE+A+ VGAVAV N II++A +R T HAE L + Sbjct: 2 HEQFLLAALEQAKLGRGFCAPNPSVGAVAVQNGNIIAQAWHR----GAGTPHAEQLLL-- 55 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106 +IL Q P V LYVTLEPC C AI I + + +P Sbjct: 56 -SQILPQT--PGVTLYVTLEPCNHWGKTPPCVDAIINHGIEEVVFSYFDPN 103 >gi|78185053|ref|YP_377488.1| riboflavin biosynthesis protein RibD [Synechococcus sp. CC9902] gi|78169347|gb|ABB26444.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Synechococcus sp. CC9902] Length = 349 Score = 80.0 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 43/131 (32%), Gaps = 20/131 (15%) Query: 26 VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83 VGAV + ++ + HAE+ A+ + L VTLEPC Sbjct: 21 VGAVVLDQHGCLVGEGFHARAGE----PHAEVGALAQAG-----DRAKGGTLVVTLEPCC 71 Query: 84 -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 CA A+ A I R+ +P G A E+ G+ + + Sbjct: 72 HHGLTPPCADAVLKAGIHRVVIALEDPDPRVAGGGIARLRSAGL----EVMSGVLQAEAV 127 Query: 139 QIIQDFFKERR 149 + F R Sbjct: 128 FQNRAFLHRVR 138 >gi|291334222|gb|ADD93888.1| predicted diaminohydroxyphosphoribosylaminopyrimidine deaminase [uncultured marine bacterium MedDCM-OCT-S08-C1463] Length = 348 Score = 80.0 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 26/155 (16%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + F+S A+ + + VG V V N+II R +HAEI AI Sbjct: 2 SDSFFISEAISLGLKGRFTAKPGVKVGCVIVKENRIIGRGFYEKYGG----SHAEINAIN 57 Query: 61 MGCRILSQEI---LPEVDLYVTLEPCT------MCAAAISLARIRRLYYGASNPKGGGIE 111 + L DL+VTLEPC+ C + +R+ G +P GI Sbjct: 58 DVKEKYKKNYLSKLSGSDLFVTLEPCSKKGKTGACVNELKKYDFKRIVVGTKDPTQNGIN 117 Query: 112 NGTQF-YTLATCHHSPEIYPGISEQRSRQIIQDFF 145 N Y L ++ + + + + FF Sbjct: 118 NLQSAGYELKNLNNQ----------QCQALNESFF 142 >gi|310800736|gb|EFQ35629.1| cytidine and deoxycytidylate deaminase zinc-binding region [Glomerella graminicola M1.001] Length = 169 Score = 80.0 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 58/150 (38%), Gaps = 18/150 (12%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRE------LKDVTAHAEI 56 + +E A+ A + P G+V V N II NR +D T H E Sbjct: 6 DPKILRRCIELAKEALDAGDDPFGSVLVGANGSIIREDRNRVNTGESGDGRRDGTLHPEF 65 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP------KGGGI 110 LS E + +Y + E C MCAAA + + + + +S+ K G+ Sbjct: 66 TLAHWAQLNLSAEERAKASVYTSGEHCPMCAAAHAWVGLGPIVFVSSSAQFSAWLKEFGV 125 Query: 111 ENGTQFYTLATCHHSPEI-----YPGISEQ 135 E G + L +P I PG+ E+ Sbjct: 126 ERGAKVKPLPINEVAPNIPFQGPIPGLDEE 155 >gi|224023823|ref|ZP_03642189.1| hypothetical protein BACCOPRO_00539 [Bacteroides coprophilus DSM 18228] gi|224017045|gb|EEF75057.1| hypothetical protein BACCOPRO_00539 [Bacteroides coprophilus DSM 18228] Length = 146 Score = 80.0 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 44/110 (40%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 +M A+ A+N+ VGA+ V N IIS N + +T Sbjct: 13 DKRYMRMAMIWAENSYCNRRK-VGALIVKNKMIISDGYNGTPAGFENVCEDEHGITIPYV 71 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC CA I A I+R+ YG Sbjct: 72 LHAEANAITKIARSNNSS--EGATLYVTASPCIECAKLIIQAGIKRVVYG 119 >gi|52841411|ref|YP_095210.1| riboflavin biosynthesis protein RibD [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628522|gb|AAU27263.1| riboflavin biosynthesis protein RibD [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 357 Score = 80.0 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 17/111 (15%) Query: 4 GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ ALE+A+ VGAVAV N II++A +R T HAE L + Sbjct: 2 HEQFLLAALEQAKLGRGFCAPNPSVGAVAVQNGNIIAQAWHR----GAGTPHAEQLLLSQ 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106 P V LYVTLEPC C AI I + + +P Sbjct: 58 -----IPPQTPGVTLYVTLEPCNHWGKTPPCVDAIINHGIEEVVFSYFDPN 103 >gi|49475527|ref|YP_033568.1| riboflavin biosynthesis protein ribD [Bartonella henselae str. Houston-1] gi|49238333|emb|CAF27557.1| Riboflavin biosynthesis protein ribD [Bartonella henselae str. Houston-1] Length = 365 Score = 80.0 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 26/143 (18%) Query: 8 MSCALEEAQN-AALRNEIP-VGAVAVLNNK-----IISRAGNRNRELKDVTAHAEILAIR 60 M+ A+ A+ L E P VG + N++ I+ HAE+ A++ Sbjct: 1 MAAAIRLAERHVGLTGENPSVGTIIARNDENVGVYIVGYG----VTAIQGRPHAEVQALQ 56 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 M + YVTLEPC+ C + + I R+ ++ G Sbjct: 57 MAGSLAH-----GATAYVTLEPCSHYGKTSPCVNTLLKSGISRVVIALTDLDKRVNGRGI 111 Query: 115 QFYTLATCHHSPEIYPGISEQRS 137 A E+ G+ + + Sbjct: 112 ALLRAAG----IEVIEGVLAKEA 130 >gi|320354782|ref|YP_004196121.1| CMP/dCMP deaminase zinc-binding protein [Desulfobulbus propionicus DSM 2032] gi|320123284|gb|ADW18830.1| CMP/dCMP deaminase zinc-binding protein [Desulfobulbus propionicus DSM 2032] Length = 197 Score = 80.0 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 19/153 (12%) Query: 8 MSCALEEAQNAAL-RNEIPVGA-VAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M+ L A+ ++ P A V + K+I NR L +AHAEI A+ + + Sbjct: 34 MAAVLRFARLNTEHQSGGPFSAGVFERDSGKLIVIGVNRVIPLNCSSAHAEITALTLAQQ 93 Query: 65 ILSQEILPE-----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +L L L V PC MC A+ + IR L ++P+ I T F Sbjct: 94 MLGVYDLGGPGLPAHQLVVNWSPCAMCFGAVLWSGIRSLVIAGADPEMMAI---TGFDEG 150 Query: 120 ATCHH--------SPEIYPGISEQRSRQIIQDF 144 H E+ G+ + + + ++F Sbjct: 151 PMPEHWRRELADRGIELIEGVMREEALKGFREF 183 >gi|227509437|ref|ZP_03939486.1| competence protein ComEB [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191149|gb|EEI71216.1| competence protein ComEB [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 163 Score = 80.0 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 18/115 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49 +K FM A+ A + + VGAV V + +II+ N + D Sbjct: 10 IKWDQYFMMQAVLLASRSTCER-LSVGAVIVRDKRIIAGGYNGSVAGDDHCIDVGCYLVD 68 Query: 50 ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI + ++YVT PC C + A I+R+ Y Sbjct: 69 GHCVRTIHAEMNAILQCAKFGESTD--NAEIYVTDFPCLQCTKMLLQAGIKRINY 121 >gi|307328879|ref|ZP_07608049.1| riboflavin biosynthesis protein RibD [Streptomyces violaceusniger Tu 4113] gi|306885544|gb|EFN16560.1| riboflavin biosynthesis protein RibD [Streptomyces violaceusniger Tu 4113] Length = 297 Score = 80.0 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 51/145 (35%), Gaps = 27/145 (18%) Query: 8 MSCALEEAQNAALRN----EIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMG 62 M A+ A +A PVG V + + + + + + HAE+ A+ Sbjct: 10 MRRAI--AISAQGLGTTSPNPPVGCVILDRDGVPVGEGYHLRKGDH----HAEVNALTAA 63 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 E VTLEPC C A+ A++ R+ +P G G Sbjct: 64 G-----ERAEGGTAVVTLEPCNHHGRTPPCRQALIDAKVSRVLMAVMDPTSRGEG-GAAV 117 Query: 117 YTLATCHHSPEIYPGISEQRSRQII 141 A E+ G+ EQ + ++ Sbjct: 118 LEQAG----IEVERGVLEQEALLVL 138 >gi|254474397|ref|ZP_05087783.1| riboflavin biosynthesis protein RibD [Ruegeria sp. R11] gi|214028640|gb|EEB69475.1| riboflavin biosynthesis protein RibD [Ruegeria sp. R11] Length = 358 Score = 80.0 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 49/146 (33%), Gaps = 21/146 (14%) Query: 8 MSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 MS AL + + VG V V + +I+ R + HAE Sbjct: 1 MSLALSLGRRGQGQCWPNPAVGCVIVKDGRIVGRGWTQPGGR----PHAEPE-----ALA 51 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + + YV+LEPC CA A+ A ++R+ + +G Sbjct: 52 RAGALARGATAYVSLEPCAHFGKTPPCAQALIDAGVKRVVAAIEDSDPRVSGHGFAMLRD 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145 A E+ GI + + FF Sbjct: 112 AG----IEVTTGICADEAARDHAGFF 133 >gi|34496745|ref|NP_900960.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Chromobacterium violaceum ATCC 12472] gi|34102600|gb|AAQ58965.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Chromobacterium violaceum ATCC 12472] Length = 368 Score = 80.0 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 53/150 (35%), Gaps = 18/150 (12%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++M AL A+ A R VG V V + +++ L + HAE+ AI+ Sbjct: 7 DDYLYMQRALRLAEGATRRAAPNPGVGCVLVNHGRVVGEGA----TLALGSDHAEVQAIK 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC CA + + R+ +P G Sbjct: 63 DCLARGESPR--GATAYVTLEPCSHHGRTPPCAERLVKEGVARVVAAMVDPYHEVSGRGI 120 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E G+ E ++R+ + F Sbjct: 121 AMLRAAG----VEASAGLMEAQARRAHRGF 146 >gi|122879285|ref|YP_202359.6| hypothetical protein XOO3720 [Xanthomonas oryzae pv. oryzae KACC10331] Length = 186 Score = 80.0 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 17/149 (11%) Query: 10 CALEEAQ-NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A++ ++ N + P GAV +++II+ A NR AHAE +A + + L Sbjct: 33 LAIKLSRMNVQEHSGGPFGAVVFGPDHRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQ 92 Query: 68 QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122 L V L + +PC C A A I RL GA + TQF Sbjct: 93 TPRLNAVLSPITLATSAQPCCQCYGATVWAGIDRLLIGARADDVMAL---TQFDEGPLPA 149 Query: 123 -------HHSPEIYPGISEQRSRQIIQDF 144 E+ + ++ +++++ Sbjct: 150 DWVGELTRRGIEVVRDVLRDQACAVLRNY 178 >gi|242011321|ref|XP_002426401.1| cytidine and deoxycytidylate deaminase zinc-binding region, putative [Pediculus humanus corporis] gi|212510500|gb|EEB13663.1| cytidine and deoxycytidylate deaminase zinc-binding region, putative [Pediculus humanus corporis] Length = 359 Score = 80.0 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 62/177 (35%), Gaps = 55/177 (31%) Query: 8 MSCALEEAQNAALRN-EIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M L+ ++N + A+ V +II+ +R HA ++AI + R Sbjct: 190 MKRVLKMSEN--ENGKNV---AMIVDFKERRIIAWGCDRVEVH--PLQHAVMVAIDVVAR 242 Query: 65 IL--SQEILP-------------------------------------------EVDLYVT 79 LP DLYV Sbjct: 243 TNNGGAWDLPYDELTFDMKNATLNHESSSMDKVKLKAGEVDDDDDDEAPYLCTGYDLYVA 302 Query: 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136 EPC MCA ++ +RI+R+++ NP+ G + + +T+ +H E++ + + Sbjct: 303 KEPCVMCAMSLVHSRIKRVFFHVRNPERGALASACHVHTIKDLNHHYEVFEFVKAKE 359 >gi|307609932|emb|CBW99459.1| riboflavin biosynthesis protein RibD [Legionella pneumophila 130b] Length = 357 Score = 80.0 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 39/111 (35%), Positives = 50/111 (45%), Gaps = 17/111 (15%) Query: 4 GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ ALE+A+ VGAVAV N II++A +R T HAE L + Sbjct: 2 HEQFLLAALEQAKLGRGFCAPNPSVGAVAVQNGNIIAQAWHR----GAGTPHAEQLLL-- 55 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106 +IL Q P V LYVTLEPC C AI I + + +P Sbjct: 56 -SQILPQT--PGVTLYVTLEPCNHWGKTPPCVDAIINHGIEEVVFSYFDPN 103 >gi|294670|gb|AAA90930.1| putative [Gordonia rubripertincta] Length = 175 Score = 80.0 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 13/99 (13%) Query: 8 MSCALEEAQNAALRNEIPVGA-----VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 ++ ALEEA GA + L+ +++SR N+ + D ++H E A R Sbjct: 33 LAVALEEAHIGLAE-----GASDWRSIFTLDGELVSRGHNQRIQDNDPSSHGETDAFRNA 87 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 R + L TL PC C + ++ G Sbjct: 88 GRHT-TWR--DKILVTTLAPCWYCTGMVRQFGFAKVVMG 123 >gi|313885967|ref|ZP_07819705.1| riboflavin biosynthesis protein RibD [Porphyromonas asaccharolytica PR426713P-I] gi|312924497|gb|EFR35268.1| riboflavin biosynthesis protein RibD [Porphyromonas asaccharolytica PR426713P-I] Length = 343 Score = 80.0 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 3 KGNVFMSCALEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 ++M L+ A A + VG+V V +KII + HAE++A Sbjct: 11 SDQIYMQRCLQLA--ALAQGRTSPNPMVGSVIVYKDKIIGEGYHHYAGA----PHAEVMA 64 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 R L ++ + YV+LEPC CA ++ R R+ +P Sbjct: 65 WRSVPEELRS-VIGKATWYVSLEPCAHYGKTPPCAELLAGLRPARVVIAMLDPFAKVDGR 123 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G A E+ G EQ + + + F Sbjct: 124 GVARLREAG----IEVSIGCLEQAAIALNRHF 151 >gi|255561486|ref|XP_002521753.1| hydrolase, putative [Ricinus communis] gi|223538966|gb|EEF40563.1| hydrolase, putative [Ricinus communis] Length = 423 Score = 80.0 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 D+Y+ EPCTMCA A+ RIRR+++ NP G + + + + +H ++ Sbjct: 344 TGYDIYMVWEPCTMCAMALVHQRIRRIFFAFPNPNAGALGSVYRLQGEKSLNHHYAVFRV 403 Query: 132 ISEQR 136 + + Sbjct: 404 VLPEE 408 >gi|326382172|ref|ZP_08203864.1| riboflavin biosynthesis protein RibD [Gordonia neofelifaecis NRRL B-59395] gi|326198902|gb|EGD56084.1| riboflavin biosynthesis protein RibD [Gordonia neofelifaecis NRRL B-59395] Length = 339 Score = 80.0 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 51/139 (36%), Gaps = 21/139 (15%) Query: 8 MSCALEE--AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ E A PVGAV + + I+ R + HAE++A+R Sbjct: 10 MRRAIAESEAAQGFTTPNPPVGAVVLDADGEIA-GVGRTQPPGGP--HAEVMALRAAG-- 64 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E VTLEPC C A+ A I +++ ++P Sbjct: 65 ---ERARGGTAVVTLEPCDHTGRTGPCTQALLSAGIADVHFAVADPNPDAAGGAQTLRAA 121 Query: 120 ATCHHSPEIYPGISEQRSR 138 +++PG+ E +R Sbjct: 122 -----GVDVHPGVLESEAR 135 >gi|325141619|gb|EGC64081.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 961-5945] gi|325141652|gb|EGC64113.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 961-5945] gi|325141685|gb|EGC64145.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 961-5945] Length = 369 Score = 80.0 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 55/159 (34%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M AL A + P VG V ++I+ + + HAE+ A+ Sbjct: 4 DTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + +VTLEPC CA A+ + + R+ +P G Sbjct: 60 HQAGEMA-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 115 LAMLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149 >gi|222111713|ref|YP_002553977.1| riboflavin biosynthesis protein ribd [Acidovorax ebreus TPSY] gi|221731157|gb|ACM33977.1| riboflavin biosynthesis protein RibD [Acidovorax ebreus TPSY] Length = 370 Score = 80.0 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 56/156 (35%), Gaps = 19/156 (12%) Query: 1 MKKGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEIL 57 M + F+S AL A A L N P VG V + ++ + + HAE++ Sbjct: 1 MTDASPFISQALGLAAQALFLSNPNPRVGCVITSDAGAVLGQGFTQQAGG----PHAEVM 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 A+R + YVTLEPC C A+ A I R+ ++P Sbjct: 57 ALRDAAARGNDVR--GATAYVTLEPCAHQGRTGPCCDALIQAGIARVVASVADPNPLVAG 114 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G A + G +R++ FF Sbjct: 115 QGFARLRAAG----VAVEAGPGAAETRELNIGFFSR 146 >gi|226304136|ref|YP_002764094.1| deaminase [Rhodococcus erythropolis PR4] gi|226183251|dbj|BAH31355.1| putative deaminase [Rhodococcus erythropolis PR4] Length = 159 Score = 79.6 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 2/102 (1%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + +E A A + P G+V + ++ NR D T H E R + L Sbjct: 9 LRRCVELATEALDAGDEPFGSVLAAADGTFLAEDRNR-IAGGDNTRHPEFELARWAAQYL 67 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 + E ++ + E C MC+AA + + R+ Y S+ + G Sbjct: 68 TPEERSTATVFTSGEHCAMCSAAHAWVGLGRIVYICSSAQLG 109 >gi|268611051|ref|ZP_06144778.1| dCMP deaminase [Ruminococcus flavefaciens FD-1] Length = 160 Score = 79.6 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 46/120 (38%), Gaps = 25/120 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKD---------- 49 + FM A+ AQ + N VGA V + +KI+S N D Sbjct: 7 ISWDEYFMGIAMLSAQRSKD-NSTQVGACIVNDEHKIVSVGYNGMPTGCDDDEMPWERSA 65 Query: 50 ---------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + L +YVTL PC CA AI + I+R+ Y Sbjct: 66 ENELDTKYPFVCHAELNAILN----SNIGNLSGCTVYVTLFPCNECAKAIIQSGIKRVVY 121 >gi|254441291|ref|ZP_05054784.1| riboflavin biosynthesis protein RibD [Octadecabacter antarcticus 307] gi|198251369|gb|EDY75684.1| riboflavin biosynthesis protein RibD [Octadecabacter antarcticus 307] Length = 370 Score = 79.6 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 48/149 (32%), Gaps = 27/149 (18%) Query: 8 MSCALEEAQNAALR-NEIP-VGAVAVLNNK----IISRAGNRNRELKDVTAHAEILAIRM 61 M AL + R P VG V V N+ +I R HAE A+ Sbjct: 1 MGMALSLGRRGLGRVWPNPNVGCVIVRPNENGGRVIGRGW----TADGGRPHAETRALD- 55 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC C A+ A + R+ +P G Sbjct: 56 ------GIDADGATSYVTLEPCAHHGKTPPCVDALIGANVGRVVIATGDPDPRVAGKGVA 109 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ E +R+ + F Sbjct: 110 MLRAAG----IDVITGVREHEAREDMAGF 134 >gi|84625170|ref|YP_452542.1| hypothetical protein XOO_3513 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188575398|ref|YP_001912327.1| cytidine and deoxycytidylate deaminase zinc-binding region [Xanthomonas oryzae pv. oryzae PXO99A] gi|84369110|dbj|BAE70268.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519850|gb|ACD57795.1| cytidine and deoxycytidylate deaminase zinc-binding region [Xanthomonas oryzae pv. oryzae PXO99A] Length = 186 Score = 79.6 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 17/149 (11%) Query: 10 CALEEAQ-NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A++ ++ N + P GAV +++II+ A NR AHAE +A + + L Sbjct: 33 LAIKLSRMNVQEHSGGPFGAVVFGPDHRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQ 92 Query: 68 QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122 L V L + +PC C A A I RL GA + TQF Sbjct: 93 TPRLNAVLSPITLATSAQPCCQCYGATVWAGIDRLLIGARADDVMAL---TQFDEGPLPA 149 Query: 123 -------HHSPEIYPGISEQRSRQIIQDF 144 E+ + ++ +++++ Sbjct: 150 DWVGELTRRGIEVVRDVLRDQACAVLRNY 178 >gi|302541276|ref|ZP_07293618.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Streptomyces hygroscopicus ATCC 53653] gi|302458894|gb|EFL21987.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Streptomyces himastatinicus ATCC 53653] Length = 158 Score = 79.6 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 3/107 (2%) Query: 1 MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILA 58 M ++ + +E A A + P G+V V + +++ N+ D T H E Sbjct: 1 MTDDDLRHLRRCVELATEALEAGDEPFGSVLVAADGTVLAEDHNQV-AGGDHTRHPEFAL 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 R L+ +Y + E C MCAAA + R+ Y +S+ Sbjct: 60 ARWAAARLTPAERAAATVYTSGEHCPMCAAAHGWVGLGRIVYASSSE 106 >gi|119899093|ref|YP_934306.1| AMP deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Azoarcus sp. BH72] gi|119671506|emb|CAL95419.1| AMP deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Azoarcus sp. BH72] Length = 363 Score = 79.6 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 19/128 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VG V V + +I+ ++ AHAE+ A+ + E YVTLEPC Sbjct: 31 VGCVLVRDGEIVGEGWHQRAGE----AHAEVHAL-----RAAGERAAGATAYVTLEPCSH 81 Query: 84 ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C A+ A +RR+ +P +G A + G+ E +R+ Sbjct: 82 FGRTPPCCEALVAAGVRRVVAAMEDPNPLVAGSGLARLRAAG----IDTAHGLLESEARE 137 Query: 140 IIQDFFKE 147 + F Sbjct: 138 LNIGFISR 145 >gi|260655489|ref|ZP_05860977.1| deoxycytidylate deaminase [Jonquetella anthropi E3_33 E1] gi|260629937|gb|EEX48131.1| deoxycytidylate deaminase [Jonquetella anthropi E3_33 E1] Length = 180 Score = 79.6 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 47/127 (37%), Gaps = 28/127 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 + FM AL A + VGAV V + ++IS N +L Sbjct: 9 DSYFMMLALVAATRSTCLRRR-VGAVIVRHGQVISTGYNGAPRGTPHCSETGCLRAQLGI 67 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE+ AI + + +LY T PC C+ A+ A IRR+ Y Sbjct: 68 PSGQKHELCRGSHAEMNAI--ALAASQGVVTDDGELYCTHSPCVFCSKALINAGIRRVVY 125 Query: 101 --GASNP 105 G + Sbjct: 126 LQGYPDE 132 >gi|315126753|ref|YP_004068756.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudoalteromonas sp. SM9913] gi|315015267|gb|ADT68605.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Pseudoalteromonas sp. SM9913] Length = 158 Score = 79.6 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 2/100 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 + + + A+ A + P G+V V + NR D T H E R Sbjct: 3 ETDLAHLKRTVVLAKEALEAGDEPFGSVLVDAEGNVCMEDRNRV-AGGDHTRHPEFEIAR 61 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++ E +Y + E C MCAAA + + R+ Y Sbjct: 62 WAANNMTPEQRAGATVYTSGEHCPMCAAAHAWVGLGRIMY 101 >gi|239998220|ref|ZP_04718144.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase [Neisseria gonorrhoeae 35/02] gi|268594076|ref|ZP_06128243.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae 35/02] gi|268547465|gb|EEZ42883.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae 35/02] Length = 369 Score = 79.6 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 54/153 (35%), Gaps = 24/153 (15%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A + P VG V +I+ + + HAE+ A+ + Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGE----PHAEVHALHQAGEM 65 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +VTLEPC CA A+ + + R+ +P G Sbjct: 66 A-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKA 120 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 121 AGI--KTEC--GLLENKARELNRGFLSRIERRR 149 >gi|78776348|ref|YP_392663.1| CMP/dCMP deaminase, zinc-binding [Sulfurimonas denitrificans DSM 1251] gi|78496888|gb|ABB43428.1| CMP/dCMP deaminase, zinc-binding [Sulfurimonas denitrificans DSM 1251] Length = 145 Score = 79.6 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 29/123 (23%) Query: 1 MKKGNVFMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGN--------RNRELKD 49 M F++ A+E A+ + + VGAV V + +I+S N +D Sbjct: 1 MLSDENFINIAIEIAKASKCVSKQ----VGAVIVKDGRILSTGYNGTPAGYINCREHWED 56 Query: 50 V-TA-----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 T HAE+ AI R + +YVTLEPC+ C+ I + I+R Sbjct: 57 KYTHEHHEWSKTYEIHAEMNAIIWAARKGIS--IENATIYVTLEPCSECSKNIIASGIQR 114 Query: 98 LYY 100 + Y Sbjct: 115 IVY 117 >gi|260655866|ref|ZP_05861335.1| riboflavin biosynthesis protein RibD [Jonquetella anthropi E3_33 E1] gi|260629482|gb|EEX47676.1| riboflavin biosynthesis protein RibD [Jonquetella anthropi E3_33 E1] Length = 358 Score = 79.6 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 53/153 (34%), Gaps = 24/153 (15%) Query: 8 MSCALEEA-QNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A + A + P VG V V + +I+ +R A Sbjct: 1 MRMALSLAARGAGTTSPNPMVGCVIVRDGHVIATGWHRAPGAPHAEA---------AALA 51 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + E +YV LEPC CA A+ A++ R+ G +P G Sbjct: 52 AAGERAEGATVYVNLEPCAHQGRTPPCAPALVSAKVVRVVAGLVDPFPQVAGKGIGILRE 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 A E+ + + S + + F K +R Sbjct: 112 AG----IEVDCPVLAEESAWLNRGFLSAVKRKR 140 >gi|227512166|ref|ZP_03942215.1| competence protein ComEB [Lactobacillus buchneri ATCC 11577] gi|227084560|gb|EEI19872.1| competence protein ComEB [Lactobacillus buchneri ATCC 11577] Length = 167 Score = 79.6 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 18/115 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49 +K FM A+ A + + VGAV V + +II+ N + D Sbjct: 14 IKWDQYFMMQAVLLASRSTCER-LSVGAVIVRDKRIIAGGYNGSVAGDDHCIDVGCYLVD 72 Query: 50 ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI + ++YVT PC C + A IRR+ Y Sbjct: 73 GHCVRTIHAEMNAILQCAKFGESTD--NAEIYVTDFPCLQCTKMLLQAGIRRINY 125 >gi|127512238|ref|YP_001093435.1| CMP/dCMP deaminase, zinc-binding [Shewanella loihica PV-4] gi|126637533|gb|ABO23176.1| CMP/dCMP deaminase, zinc-binding [Shewanella loihica PV-4] Length = 273 Score = 79.6 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 52/147 (35%), Gaps = 22/147 (14%) Query: 7 FMSCALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 +M A+++ + + + P VGAV V + K+ T HAE AI Sbjct: 9 YMKQAVDQMRMSEGKG--PKVGAVIVTKGHQVIAGH-----KKNGT-HAERAAIEEAQEK 60 Query: 66 LSQEILPEVDLYVTLEPCT-------MCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 L LY TLEPC C+ IS I+ +Y G +P G + Sbjct: 61 KI--DLRGATLYSTLEPCVSVGSKKEACSDLISRVGIKTVYIGRYDPNPNIQRLGWKKLR 118 Query: 119 LATCH-HSPEIYPGISEQRSRQIIQDF 144 H +I +I Q F Sbjct: 119 DEGISLHDFDIE---FRNEIDEINQTF 142 >gi|111019584|ref|YP_702556.1| hypothetical protein RHA1_ro02593 [Rhodococcus jostii RHA1] gi|110819114|gb|ABG94398.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 159 Score = 79.6 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 2/94 (2%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + +E A+ A + P G+V + + ++ NR D T H E R + Sbjct: 10 LRRCVELAREAVEAGDEPFGSVLASADGVALAEDRNRV-AGGDATRHPEFELARWAAENM 68 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E ++ + E C MC+AA + R+ Y Sbjct: 69 PPEERARATVFTSGEHCPMCSAAHGWVGLGRIVY 102 >gi|56420832|ref|YP_148150.1| riboflavin-specific deaminase [Geobacillus kaustophilus HTA426] gi|56380674|dbj|BAD76582.1| riboflavin-specific deaminase (diaminohydroxyphosphoribosylaminopyrimidine deaminase ; 5-amino-6-(5-phosphoribosylamino)uracil reductase ) [Geobacillus kaustophilus HTA426] Length = 380 Score = 79.6 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 53/166 (31%), Gaps = 47/166 (28%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------RNR 45 M +M AL+ A+ + + N Sbjct: 1 MHNDEHYMRLALDVAKAGVGQ-----------------TSPNPAVGAVVVNGGTVVGLGG 43 Query: 46 ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLY 99 LK HAE+ AIRM +YVTLEPC CA + A +RR+ Sbjct: 44 HLKAGEPHAEVYAIRMAGEKA-----RGATVYVTLEPCSHYGKTPPCADLLIQAGVRRVV 98 Query: 100 YGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 ++P G A ++ G+ + + ++ + FF Sbjct: 99 VATTDPNPLVAGKGIAKLRQAG----IDVDVGVLKDEADELNRMFF 140 >gi|261417867|ref|YP_003251549.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y412MC61] gi|319767321|ref|YP_004132822.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y412MC52] gi|261374324|gb|ACX77067.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y412MC61] gi|317112187|gb|ADU94679.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y412MC52] Length = 380 Score = 79.6 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 49/177 (27%), Gaps = 69/177 (38%) Query: 1 MKKGNVFMSCALEEAQNA--------------------------ALRNEIPVGAVAVLNN 34 M +M AL+ A+ E Sbjct: 1 MHNDEHYMRLALDVAKAGVGQTSPNPAVGAVVVNGGTVVGLGAHLKAGEP---------- 50 Query: 35 KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAA 88 HAE+ AIRM +YVTLEPC CA Sbjct: 51 ------------------HAEVYAIRMAGEKA-----RGATVYVTLEPCSHYGKTPPCAD 87 Query: 89 AISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A +RR+ ++P G A ++ G+ + + ++ + FF Sbjct: 88 LLIQAGVRRVVVATTDPNPLVAGKGIAKLRQAG----IDVDVGVLKDEADELNRMFF 140 >gi|325283811|ref|YP_004256352.1| riboflavin biosynthesis protein RibD [Deinococcus proteolyticus MRP] gi|324315620|gb|ADY26735.1| riboflavin biosynthesis protein RibD [Deinococcus proteolyticus MRP] Length = 376 Score = 79.6 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 58/158 (36%), Gaps = 26/158 (16%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLN----NKIISRAGNRNRELKDVTAHAEI 56 FM+ AL EA R PVG V V +++ R + HAE+ Sbjct: 7 SDEDFMAQALAEAARGLGRTSPNPPVGCVLVQPNGSGGEVVGRGFHPRAGE----PHAEV 62 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 A+R E YVTLEPC CA A+ A + R+ A +P Sbjct: 63 FALREAG-----ERARGATAYVTLEPCSHFGRTPPCADALMAAGVARVVVAAGDPNPQVN 117 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 G + A + G+ E ++ + Q F+ R Sbjct: 118 GRGLERLRAAG----IAVQTGVLEAQAVRQ-QAGFRAR 150 >gi|302671281|ref|YP_003831241.1| CMP/dCMP deaminase zinc-binding domain-containing protein [Butyrivibrio proteoclasticus B316] gi|302395754|gb|ADL34659.1| CMP/dCMP deaminase zinc-binding domain-containing protein [Butyrivibrio proteoclasticus B316] Length = 172 Score = 79.6 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 43/100 (43%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 +M E A +A + GAV V + KI+ A N K + HAE + Sbjct: 5 DENYMKRCYELAISAGKKGFDTFGAVLVCDGKILEEAENTADFEKKIFGHAEFNLVHKCA 64 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + +IL + +Y + PC C AAI+ + ++ G S Sbjct: 65 NKYTDDILEKSVVYTSCAPCERCLAAIASLGVHKVVCGVS 104 >gi|282856020|ref|ZP_06265309.1| ComE operon protein 2 [Pyramidobacter piscolens W5455] gi|282586139|gb|EFB91418.1| ComE operon protein 2 [Pyramidobacter piscolens W5455] Length = 180 Score = 79.6 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 46/125 (36%), Gaps = 26/125 (20%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKDV 50 + FM+ AL A + VGAV V + +IIS N +L Sbjct: 10 SYFMTLALVAATRSTCLR-RQVGAVIVRDGQIISTGYNGAPKGTPHCFETGCLRTKLGIP 68 Query: 51 TA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + HAE+ AI + LY T PC+ C AI A IRR+ Y Sbjct: 69 SGERHEICRGSHAEMNAIAQAASVGVST--AGASLYCTHSPCSFCTKAIINAGIRRVVYL 126 Query: 102 ASNPK 106 S P Sbjct: 127 YSYPD 131 >gi|119945504|ref|YP_943184.1| CMP/dCMP deaminase, zinc-binding [Psychromonas ingrahamii 37] gi|119864108|gb|ABM03585.1| CMP/dCMP deaminase, zinc-binding [Psychromonas ingrahamii 37] Length = 191 Score = 79.2 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 5/110 (4%) Query: 8 MSCALEEAQNAALRN-EIPVGAVA--VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M+ + A+ + P A + K++S N HAEI+A+ R Sbjct: 33 MAFVISAAKKNVEQGSGGPFAAAVFEIETGKLVSLGVNLVTTQGLSILHAEIVALVAAQR 92 Query: 65 ILSQEIL--PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 L L +L + EPC MC AIS + + + A++ I Sbjct: 93 KLRTYDLAITRHELVTSAEPCAMCLGAISWSGVCHVATAATDQDVSAIGF 142 >gi|89055912|ref|YP_511363.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Jannaschia sp. CCS1] gi|88865461|gb|ABD56338.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Jannaschia sp. CCS1] Length = 365 Score = 79.2 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 21/122 (17%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +M+ AL ++ P VG V V +++ R + HAE++A Sbjct: 2 SDARWMALALSLGARGM--GQVWPNPAVGCVLVREGRVVGRGW----TARGGRPHAEVVA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 + + YV+LEPC CA+A+ A + R+ +P Sbjct: 56 LGQAGALA-----RGACAYVSLEPCNHVGQTGPCASALIDAGVARVVVACEDPDPRVAGG 110 Query: 113 GT 114 G Sbjct: 111 GI 112 >gi|304388339|ref|ZP_07370452.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis ATCC 13091] gi|304337656|gb|EFM03812.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis ATCC 13091] Length = 369 Score = 79.2 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 55/159 (34%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M AL A + P VG V ++++ + + HAE+ A+ Sbjct: 4 DTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQVVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + +VTLEPC CA A+ + + R+ +P G Sbjct: 60 HQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 115 FAMLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149 >gi|297529535|ref|YP_003670810.1| riboflavin biosynthesis protein RibD [Geobacillus sp. C56-T3] gi|297252787|gb|ADI26233.1| riboflavin biosynthesis protein RibD [Geobacillus sp. C56-T3] Length = 380 Score = 79.2 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 49/177 (27%), Gaps = 69/177 (38%) Query: 1 MKKGNVFMSCALEEAQNA--------------------------ALRNEIPVGAVAVLNN 34 M +M AL+ A+ E Sbjct: 1 MHNDEHYMRLALDVAKAGVGQTSPNPAVGAVVVNGGTVVGLGAHLKAGEP---------- 50 Query: 35 KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAA 88 HAE+ AIRM +YVTLEPC CA Sbjct: 51 ------------------HAEVYAIRMAGEKA-----RGATVYVTLEPCSHYGKTPPCAD 87 Query: 89 AISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A +RR+ ++P G A ++ G+ + + ++ + FF Sbjct: 88 LLIQAGVRRVVVATTDPNPLVAGKGIAKLRQAG----IDVDVGVLKDEADELNRMFF 140 >gi|317163508|gb|ADV07049.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase [Neisseria gonorrhoeae TCDC-NG08107] Length = 361 Score = 79.2 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 54/153 (35%), Gaps = 24/153 (15%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A + P VG V +I+ + + HAE+ A+ + Sbjct: 2 MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGE----PHAEVHALHQAGEM 57 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 +VTLEPC CA A+ + + R+ +P G Sbjct: 58 A-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKA 112 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 113 AGI--KTEC--GLLENKARELNRGFLSRIERRR 141 >gi|218662593|ref|ZP_03518523.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase protein [Rhizobium etli IE4771] Length = 287 Score = 79.2 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 47/141 (33%), Gaps = 21/141 (14%) Query: 4 GNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM+ A+ ++ VG + V + ++ +A HAE A+ Sbjct: 7 DESFMAAAIRLSRRHLGRTATNPSVGCLIVKDGVVVGQA----VTALGGRPHAEPQAL-- 60 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + E YVTLEPC CA A+ + R+ ++P G Sbjct: 61 ---AEAGEAARGATAYVTLEPCSHHGKTPPCAEALIAHGVARVVISVTDPDPRVSGRGIA 117 Query: 116 FYTLATCHHSPEIYPGISEQR 136 A E+ G+ E Sbjct: 118 MLREAG----IEVDAGVLEAE 134 >gi|118473539|ref|YP_887383.1| riboflavin biosynthesis protein RibD [Mycobacterium smegmatis str. MC2 155] gi|118174826|gb|ABK75722.1| riboflavin biosynthesis protein RibD [Mycobacterium smegmatis str. MC2 155] Length = 335 Score = 79.2 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 57/154 (37%), Gaps = 28/154 (18%) Query: 8 MSCALEEAQ--NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTA--HAEILAIRMG 62 M A+++A+ A PVGAV + + ++ G + T HAE++ Sbjct: 9 MRLAIDQAEQVKGATYPNPPVGAVILDRDGQVAGVGGTQ------PTGGPHAEVM----- 57 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + E VTLEPC C + A I R+ Y ++P + Sbjct: 58 ALRAAAERAEGGTAVVTLEPCNHHGRTPPCVDGLVAAGISRVVYAVADPNPVAAGGSARM 117 Query: 117 YTLATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149 + E+ G+ + ++++ ++R Sbjct: 118 ASS-----GIEVTSGVLSDEVAGGPLREWLHKQR 146 >gi|325916859|ref|ZP_08179107.1| cytosine/adenosine deaminase [Xanthomonas vesicatoria ATCC 35937] gi|325536904|gb|EGD08652.1| cytosine/adenosine deaminase [Xanthomonas vesicatoria ATCC 35937] Length = 186 Score = 79.2 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 57/149 (38%), Gaps = 17/149 (11%) Query: 10 CALEEAQNAAL-RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A+ ++ R+ P GAV ++ II+ A NR AHAE +A + + L Sbjct: 33 LAIALSRMNVEARSGGPFGAVVFGPDHHIIAAAVNRVVPQNTSLAHAENMAYMLAQQRLQ 92 Query: 68 QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122 L +V L + +PC C A A I RL GA + T+F Sbjct: 93 TPRLNDVLSPVTLATSAQPCCQCYGATVWAGIDRLLIGARAEDVMAL---TEFDEGPLPT 149 Query: 123 -------HHSPEIYPGISEQRSRQIIQDF 144 E+ + +++ +++ + Sbjct: 150 DWIGELTRRGIEVVRDVQREQACAVLRSY 178 >gi|289627113|ref|ZP_06460067.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330869937|gb|EGH04646.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 271 Score = 79.2 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 43/110 (39%), Gaps = 21/110 (19%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M+ A+E+ + P VGAV V N ++IS K HAE +AI L Sbjct: 11 MNAAIEQLKKCTS---YPKVGAVIVKNGEVISTGYRGEVSGK----HAERVAIE----KL 59 Query: 67 SQEILPEVDLYVTLEPCT---------MCAAAISLARIRRLYYGASNPKG 107 L +Y TLEPC CA + + + G +P G Sbjct: 60 PNPDLTGSTIYTTLEPCVEMHGLQPHKSCAGLLKDLNVEHVVIGVLDPNG 109 >gi|66812266|ref|XP_640312.1| carbohydrate-binding domain-containing protein [Dictyostelium discoideum AX4] gi|60468325|gb|EAL66333.1| carbohydrate-binding domain-containing protein [Dictyostelium discoideum AX4] Length = 383 Score = 79.2 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 16/141 (11%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M A+ A + GA V N ++ N H E+ AI Sbjct: 52 HAKYMRIAINVAVENNSK----FGAAIVHKNGTLMCTGAN---TGGSRMYHGEVKAIMNC 104 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA-- 120 + + + LY T EPC MC+AA + ++ + + Q A Sbjct: 105 TDLYGKATWEDHYLYTTGEPCPMCSAAAMWTKFDKVIFASYVSVMYCERCFNQLPMDANE 164 Query: 121 ------TCHHSPEIYPGISEQ 135 +H+ + G+ E Sbjct: 165 IFKLGYGINHNTVLIGGVLEN 185 >gi|313768407|ref|YP_004062087.1| hypothetical protein MpV1_204 [Micromonas sp. RCC1109 virus MpV1] gi|312599103|gb|ADQ91127.1| hypothetical protein MpV1_204 [Micromonas sp. RCC1109 virus MpV1] Length = 145 Score = 79.2 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 24/116 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP-----VGAVAVLNNKIISRAGNR-----------N 44 + FM A Q A++R+ P VG V V NN++IS N Sbjct: 5 ISWDEYFMQTA----QLASVRS--PCERLKVGCVLVKNNRLISMGYNGFLGGCEHKSIVR 58 Query: 45 RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + T HAEI AI + + + + YVT PC C A++ + I+++YY Sbjct: 59 DGHEQATIHAEINAITDAAKRGAS--IDDCVAYVTHYPCLNCYKALASSGIKKVYY 112 >gi|110679096|ref|YP_682103.1| riboflavin biosynthesis protein ribD [Roseobacter denitrificans OCh 114] gi|109455212|gb|ABG31417.1| riboflavin biosynthesis protein ribD [Roseobacter denitrificans OCh 114] Length = 365 Score = 79.2 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%) Query: 1 MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + + +M+ AL + R VG V V + +II R + HA Sbjct: 1 MTEASRYMALALSLGRRGFGRVWPNPAVGCVIVKDGRIIGRGWTQPGGR----PHA---- 52 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + D+YVTLEPC CA A+ A + R++ +P Sbjct: 53 -ETQALAQAAAQARGADVYVTLEPCAHHGKTPPCAEALVRAGVARVFAATGDPDPRVHGA 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G + A H + GI E ++R+ FF Sbjct: 112 GFRALEQAGIH----VQSGILEAQARRDNAGFFAR 142 >gi|193215780|ref|YP_001996979.1| CMP/dCMP deaminase [Chloroherpeton thalassium ATCC 35110] gi|193089257|gb|ACF14532.1| CMP/dCMP deaminase zinc-binding [Chloroherpeton thalassium ATCC 35110] Length = 179 Score = 79.2 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 27/121 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42 FMS A +Q A + +GAV V +N I++ N Sbjct: 27 DEYFMSVAHLISQRATCKRAH-IGAVIVRDNNILATGYNGAPSGLPHCDDDNCLIYTSTH 85 Query: 43 ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 + T HAE+ AI + + + D+YVT PC C A+ I+++Y Sbjct: 86 PDGTIEQNCMNTIHAEMNAIIQAAKHGVS--IKDADIYVTASPCINCLKALINVGIKQIY 143 Query: 100 Y 100 Y Sbjct: 144 Y 144 >gi|319409860|emb|CBY90173.1| riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific deaminase) and 5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP reductase) [Neisseria meningitidis WUE 2594] Length = 369 Score = 79.2 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 55/159 (34%), Gaps = 24/159 (15%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M AL A + P VG V ++++ + + HAE+ A+ Sbjct: 4 DTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQVVGQGFHVKAGE----PHAEVHAL 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + +VTLEPC CA A+ + + R+ +P G Sbjct: 60 HQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149 A E G+ E ++R++ + F + RR Sbjct: 115 FAMLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149 >gi|227524104|ref|ZP_03954153.1| competence protein ComEB [Lactobacillus hilgardii ATCC 8290] gi|227088735|gb|EEI24047.1| competence protein ComEB [Lactobacillus hilgardii ATCC 8290] Length = 167 Score = 79.2 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 18/115 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49 +K FM A+ A + + VGAV V + +II+ N + D Sbjct: 14 IKWDQYFMMQAVLLASRSTCER-LSVGAVIVRDKRIIAGGYNGSVVGDDHCIDVGCYLVD 72 Query: 50 ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI + ++YVT PC C + A IRR+ Y Sbjct: 73 GHCVRTIHAEMNAILQCAKFGESTD--NAEIYVTDFPCLQCTKMLLQAGIRRINY 125 >gi|184200815|ref|YP_001855022.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Kocuria rhizophila DC2201] gi|183581045|dbj|BAG29516.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Kocuria rhizophila DC2201] Length = 434 Score = 79.2 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 18/130 (13%) Query: 26 VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 VGA + +++ +R T HAE+ ++ + L L VTLEPC Sbjct: 35 VGAALLGPTGQLLHVGHHR----GAGTPHAEVDVLQQARAARTP--LEGSTLVVTLEPCH 88 Query: 85 M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 C AA+ A + R+ Y ++P G + H + G+ +R Sbjct: 89 HTGRTGPCTAAVEAAGVPRVVYALADPTAEARGGGAALRS-----HGVHVRAGLLADEAR 143 Query: 139 QIIQDFFKER 148 ++ + + + R Sbjct: 144 ELNERWLRAR 153 >gi|32474082|ref|NP_867076.1| riboflavin bifunctional biosynthesis protein RibG [Rhodopirellula baltica SH 1] gi|32444619|emb|CAD74621.1| riboflavin bifunctional biosynthesis protein RibG [Rhodopirellula baltica SH 1] Length = 427 Score = 78.8 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 22/154 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M+ A+E A + E PVG V ++ I + ++ HAE+ A+ Sbjct: 49 DVRWMTEAIELAYQGRGKVEPNPPVGCALVRDSVCIGKGYHQRFGG----PHAEVEAL-- 102 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 S + YV+LEPC CA A+ A++ R+ +P G + Sbjct: 103 ----SSCDDATGATAYVSLEPCCHHGKTPPCADALIRAKVARVVVSVVDPFDQVDGGGIE 158 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ GI+++ +++ + K R Sbjct: 159 KLRAAG----IEVVTGIAKEAGEELLAAYLKRVR 188 >gi|134095549|ref|YP_001100624.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal)/5-amino-6-(5-phosphoribosylamino) uracil reductase [Herminiimonas arsenicoxydans] gi|133739452|emb|CAL62503.1| bifunctional riboflavin biosynthesis protein ribD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP reductase)] [Herminiimonas arsenicoxydans] Length = 363 Score = 78.8 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 53/144 (36%), Gaps = 18/144 (12%) Query: 9 SCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 ALE A VG V V N++I + AHAE+ A+ Sbjct: 11 RLALELAARGMFTTAPNPRVGCVIVKENQVIGSGYTQPAGH----AHAEVQALNDAANK- 65 Query: 67 SQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + +YVTLEPC CA A+ AR+ R+ ++P G A Sbjct: 66 -GYDVAGSTVYVTLEPCSHHGRTPPCADALIRARVARVVAAIADPNPLVAGQGLARLEAA 124 Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144 E+ G+ E +R+I F Sbjct: 125 G----IEVACGVLEAEAREINIGF 144 >gi|306841987|ref|ZP_07474661.1| riboflavin biosynthesis protein RibD [Brucella sp. BO2] gi|306843711|ref|ZP_07476311.1| riboflavin biosynthesis protein RibD [Brucella sp. BO1] gi|306276021|gb|EFM57730.1| riboflavin biosynthesis protein RibD [Brucella sp. BO1] gi|306287915|gb|EFM59332.1| riboflavin biosynthesis protein RibD [Brucella sp. BO2] Length = 373 Score = 78.8 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 49/145 (33%), Gaps = 21/145 (14%) Query: 3 KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM + A+ VG + V + I+ R HAE A+ Sbjct: 14 NDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQAL- 68 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + E YVTLEPC CA A+ A + R+ A++P G Sbjct: 69 ----AEAGEAARGATAYVTLEPCAHHGRTPPCAQALVRAGVTRVVVAATDPDERVSGKGF 124 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139 A E+ PGI +++ Sbjct: 125 AILREAG----IEVVPGILPEQAAD 145 >gi|46575874|dbj|BAB88916.2| deaminase [Burkholderia glumae] Length = 360 Score = 78.8 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 37/146 (25%), Positives = 52/146 (35%), Gaps = 21/146 (14%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M+ ALE A P VG V V + +I + D HAE+ A++ Sbjct: 1 MAKALELAARGLYTT-TPNPRVGCVIVKHGMLIGEGYTQP-AGHD---HAEVRAMKDA-- 53 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 L YVTLEPC CA + A I + G P+ G Sbjct: 54 RSRGHELRGATAYVTLEPCSHYGRTPPCAKGLVEAGIAP-WCGDGGPEPAVSGRGYAMLR 112 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E +R++ F Sbjct: 113 EAG----IEVRGGVLEDEARELNIGF 134 >gi|254718884|ref|ZP_05180695.1| riboflavin biosynthesis protein RibD [Brucella sp. 83/13] gi|265983870|ref|ZP_06096605.1| riboflavin biosynthesis protein RibD [Brucella sp. 83/13] gi|264662462|gb|EEZ32723.1| riboflavin biosynthesis protein RibD [Brucella sp. 83/13] Length = 373 Score = 78.8 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 49/145 (33%), Gaps = 21/145 (14%) Query: 3 KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM + A+ VG + V + I+ R HAE A+ Sbjct: 14 NDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQAL- 68 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + E YVTLEPC CA A+ + + R+ A++P G Sbjct: 69 ----AEAGEAARGATAYVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSGKGF 124 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139 A E+ PGI +++ Sbjct: 125 AILREAG----IEVVPGILSEQAAD 145 >gi|229819944|ref|YP_002881470.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333] gi|229565857|gb|ACQ79708.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333] Length = 163 Score = 78.8 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 2/105 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 + ++ A+ A + P G++ V + NR + D T H E+ R Sbjct: 7 DTDRAHLRRCVDLAREALDDGDEPFGSLLVDATGAVRFEDRNRV-KGGDQTRHPELEIAR 65 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 LS E +Y + E C MC+AA + + R+ Y AS+ Sbjct: 66 WAAAHLSPEERAAAVVYTSGEHCPMCSAAHAWVGLGRIVYAASSE 110 >gi|171676245|ref|XP_001903076.1| hypothetical protein [Podospora anserina S mat+] gi|170936188|emb|CAP60848.1| unnamed protein product [Podospora anserina S mat+] Length = 685 Score = 78.8 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 28/46 (60%) Query: 14 EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +A+ A NE PVG V V N ++I+R N ++ T HAE++AI Sbjct: 332 QARLALRTNETPVGCVLVHNGRVIARGMNATNVSRNGTRHAELMAI 377 Score = 61.1 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 30/49 (61%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 E LYVT+EPC MCA+ + +I+++Y+GA N K GG + + + Sbjct: 448 QESILYVTVEPCVMCASLLRQLKIKKVYFGAVNDKFGGTGGVFRIHKNS 496 >gi|300725950|ref|ZP_07059412.1| cytidine/deoxycytidylate deaminase family protein [Prevotella bryantii B14] gi|299776801|gb|EFI73349.1| cytidine/deoxycytidylate deaminase family protein [Prevotella bryantii B14] Length = 144 Score = 78.8 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 ++ A A+N+ + VGA+ V + IIS N + DVT Sbjct: 11 DLRYLRMARIWAENSYCKRRK-VGALVVKDKMIISDGYNGTPSGFENICEDDNDVTKPYV 69 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC CA I A I+R+ Y Sbjct: 70 LHAEANAITKLARSSNNSD--GSTLYVTASPCIECAKLIIQAGIKRVVYA 117 >gi|166710750|ref|ZP_02241957.1| hypothetical protein Xoryp_04620 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 186 Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 57/149 (38%), Gaps = 17/149 (11%) Query: 10 CALEEAQ-NAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A+E ++ N R+ P GA ++ II+ A NR AHAE +A + + L Sbjct: 33 LAIELSRMNVQERSGGPFGAAVFGPDQRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQ 92 Query: 68 QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122 L V L + +PC C A A I RL GA + TQF Sbjct: 93 TPRLNAVLSPITLATSAQPCCQCYGATVWAGIDRLLIGARADDVMAL---TQFDEGPLPA 149 Query: 123 -------HHSPEIYPGISEQRSRQIIQDF 144 E+ + ++ +++++ Sbjct: 150 DWVGELTRRGIEVVRDVLRDQACAVLRNY 178 >gi|118587985|ref|ZP_01545395.1| riboflavin biosynthesis protein [Stappia aggregata IAM 12614] gi|118439607|gb|EAV46238.1| riboflavin biosynthesis protein [Stappia aggregata IAM 12614] Length = 374 Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 56/156 (35%), Gaps = 22/156 (14%) Query: 4 GNVFMSCALEEAQNAALR-NEIP-VGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAI 59 FM+ A + R P V A+ V + + R + AHAE+ A+ Sbjct: 8 DARFMAAAERLTRRGLGRVWPNPSVAALIVRFEDGAAVVAG--RGVTSRPGMAHAEVNAL 65 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 YVTLEPC CA A+ A ++R+ G +P G Sbjct: 66 NQAGEKAQ-----GATCYVTLEPCSHYGRTPPCAKALIEAGVKRVVVGMLDPNPRVAGRG 120 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF-FKER 148 A E+ G+ E+ + + + F +++ Sbjct: 121 VGMLREAG----IEVVVGVREKAMQALYRGFTYRQL 152 >gi|25144639|ref|NP_499445.2| hypothetical protein Y47D3A.14 [Caenorhabditis elegans] gi|19571667|emb|CAB55073.2| C. elegans protein Y47D3A.14, confirmed by transcript evidence [Caenorhabditis elegans] Length = 287 Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 12/123 (9%) Query: 17 NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL-PEVD 75 AA + G +AV N++++S R H + + + + L D Sbjct: 157 EAARLGD---GCIAVQNDELLSTG----RPSSHPLGHPVMEMVGNLPKRHGDDYLGTGSD 209 Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTLATCHHSPEI--YPGI 132 +++ EPC MC+ A+ R++R++Y A N + G + E+G Q + + +H E+ G+ Sbjct: 210 VFLITEPCAMCSMALVHFRVKRVFY-ARNSRNGVLKEDGWQLHLEPSINHHYEVFRVEGL 268 Query: 133 SEQ 135 + Sbjct: 269 LDN 271 >gi|19114320|ref|NP_593408.1| tRNA specific adenosine deaminase subunit Tad3 (predicted) [Schizosaccharomyces pombe 972h-] gi|74638746|sp|Q9P7N4|TAD3_SCHPO RecName: Full=tRNA-specific adenosine deaminase subunit tad3; AltName: Full=tRNA-specific adenosine-34 deaminase subunit tad3 gi|7106099|emb|CAB76025.1| tRNA specific adenosine deaminase subunit Tad3 (predicted) [Schizosaccharomyces pombe] Length = 315 Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 14/145 (9%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILA 58 +K+ + + A + EI A + +++ + + +LK+ H + A Sbjct: 157 LKRIESILEDLINAAGASHKHGEIGCAAAIYDPTTDTVLAVSVDERSKLKNPINHCVMNA 216 Query: 59 I-----RMGCRILSQ-------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 I R R ++ + ++ + +T EPC MC+ + +RIRRL Y P Sbjct: 217 INLVAKRELSRRQNRTDGSKDRYLCKDLTVVMTHEPCVMCSMGLLHSRIRRLIYCKKQPL 276 Query: 107 GGGIENGTQFYTLATCHHSPEIYPG 131 GGIE+ + A +H Y G Sbjct: 277 TGGIESLYGIHWRAELNHRYLAYSG 301 >gi|259416594|ref|ZP_05740514.1| riboflavin biosynthesis protein RibD [Silicibacter sp. TrichCH4B] gi|259348033|gb|EEW59810.1| riboflavin biosynthesis protein RibD [Silicibacter sp. TrichCH4B] Length = 366 Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 21/152 (13%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 K + FM AL + R VG V V +++ R + HAE + Sbjct: 3 KSDHRFMGLALSLGRRGQGRTWPNPAVGCVIVKQGRVVGRGWTQPGGR----PHAEPM-- 56 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + YV+LEPC CA A+ A I R+ + G Sbjct: 57 ---ALAQAGAAAHGATAYVSLEPCSHHGKTPPCAQALIDAGIARVVAAIEDSDPRVSGQG 113 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 + A ++ GI + + + FF Sbjct: 114 FEMLRAAG----IKVTTGIRTEEAGFDHEGFF 141 >gi|297195567|ref|ZP_06912965.1| riboflavin biosynthesis protein RibD [Streptomyces pristinaespiralis ATCC 25486] gi|197721390|gb|EDY65298.1| riboflavin biosynthesis protein RibD [Streptomyces pristinaespiralis ATCC 25486] Length = 363 Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 46/136 (33%), Gaps = 25/136 (18%) Query: 8 MSCALEEAQNAA---LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+ A N + VG V + ++ ++ HAEI A+R Sbjct: 10 MRRAITLAARGLGSTSPNPV-VGCVITDASGHVVGEGFHQRAGG----PHAEIHALRAAG 64 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + YVTLEPC CA A+ A + R+ Y ++P G Sbjct: 65 VLA-----RGGTAYVTLEPCNHTGRTGPCAQALVEAGVARVVYAVADPNGEAAGGADTLR 119 Query: 118 TLATCHHSPEIYPGIS 133 E+ G+ Sbjct: 120 AA-----GIEVEQGLL 130 >gi|78779743|ref|YP_397855.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus str. MIT 9312] gi|78713242|gb|ABB50419.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus str. MIT 9312] Length = 364 Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 59/153 (38%), Gaps = 26/153 (16%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57 +M A+ A + + + P VGAV + N +IS + HAE++ Sbjct: 7 SHIKWMKRAIFLA--SLGKGKTSPNPLVGAVILDKNGNLISEGFHYKAGE----PHAEVM 60 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A + + +YV LEPC C + + I+++Y +P Sbjct: 61 AFNNLKKEVKDGY-----MYVNLEPCCHHGKTPPCVDKVISSGIKKIYISIQDPDKRVSG 115 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A +++ G+ ++ S ++ + F Sbjct: 116 KGIKLLKQAG----IKVHLGLCKKESLELNKAF 144 >gi|304570635|ref|YP_831168.2| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Arthrobacter sp. FB24] Length = 407 Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 48/129 (37%), Gaps = 18/129 (13%) Query: 26 VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 VGAV + + + + +R TAHAE AI R L + VTLEPC Sbjct: 40 VGAVVIGPDGRQLVTGYHR----GAGTAHAEADAIAQAGR--QGLDLTGSTMVVTLEPCN 93 Query: 85 MC------AAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 C A AI A I + Y +P + G+S + + Sbjct: 94 HCGRTGPCAQAIIDAGIASVVYAVDDPHDPAAGGAATLRAA-----GVSVRSGLSARAAF 148 Query: 139 QIIQDFFKE 147 ++ + +F+ Sbjct: 149 ELNRRWFEA 157 >gi|13476938|ref|NP_108508.1| riboflavin-specific deaminase / reductase [Mesorhizobium loti MAFF303099] gi|14027701|dbj|BAB54294.1| riboflavin-specific deaminase / reductase [Mesorhizobium loti MAFF303099] Length = 376 Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 50/150 (33%), Gaps = 25/150 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNK----IISRAGNRNRELKDVTAHAEIL 57 FM+ AL ++ A R P VG + V ++ I+ HAE Sbjct: 15 DRRFMAAALRLSRRNAGRTSTNPSVGTIIVRDDGAGPMIVGTGVTAVGGR----PHAETE 70 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ + YVTLEPC CA A+ A I R+ AS+P Sbjct: 71 ALAEAGELA-----RGATAYVTLEPCAHHGRTPPCANALVNAGIARVVGAASDPDPRVSG 125 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQII 141 G A + + + + + Sbjct: 126 KGYAILRAAG----IVVVEKVLATEAAEQM 151 >gi|183982231|ref|YP_001850522.1| bifunctional riboflavin biosynthesis protein RibG [Mycobacterium marinum M] gi|183175557|gb|ACC40667.1| bifunctional riboflavin biosynthesis protein RibG [Mycobacterium marinum M] Length = 339 Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 24/152 (15%) Query: 8 MSCALEEA--QNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A+E++ PVGAV V +++ G + D HAE++A+R Sbjct: 13 MRLAIEQSMLVKGTTYPNPPVGAVIVDQEGRVVGIGGTQP-SGGD---HAEVVALRKAGG 68 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + + VT+EPC C A+ AR+ + YG ++P G G + Sbjct: 69 LAAGA-----IAVVTMEPCNHFGKTPPCVNALIEARVGTVIYGVADPN-GIAGGGAGRLS 122 Query: 119 LATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149 A ++ G+ + ++++ ++R Sbjct: 123 AAGL----QVRSGVLADHVAAGPLREWLHKQR 150 >gi|116753576|ref|YP_842694.1| CMP/dCMP deaminase, zinc-binding [Methanosaeta thermophila PT] gi|116665027|gb|ABK14054.1| CMP/dCMP deaminase, zinc-binding protein [Methanosaeta thermophila PT] Length = 144 Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 48/131 (36%), Gaps = 24/131 (18%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 FM A A+ + VGAV V + +I+S N +++ Sbjct: 7 DEYFMEIASVVAKRSTCLRNR-VGAVIVRDKRILSTGYNGAPTGLEHCDVAGCLREKVES 65 Query: 50 VTAH-------AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 T H AE AI L + LY T +PC +CA + ARIRR+ Y Sbjct: 66 GTRHELCRAVHAEQNAIIQAA--LHGVSIEGATLYCTHQPCILCAKMMINARIRRVVYRN 123 Query: 103 SNPKGGGIENG 113 P G + Sbjct: 124 QYPDEGALRFL 134 >gi|332187003|ref|ZP_08388744.1| riboflavin biosynthesis protein RibD [Sphingomonas sp. S17] gi|332013013|gb|EGI55077.1| riboflavin biosynthesis protein RibD [Sphingomonas sp. S17] Length = 313 Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 48/151 (31%), Gaps = 24/151 (15%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M AL A R P VG + V + ++I R + HAE +A+ Sbjct: 1 MGAALALAGRGIGRT-APNPNVGCILVRDGRVIGRGWTQPGGR----PHAEAMALAEAGE 55 Query: 65 ILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 YVTLEPC C + A + + +P G Sbjct: 56 SAC-----GATAYVTLEPCAHVSTRGPACTDLLIAAGVAHIVAAMGDPDPRTNGQGFDRA 110 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 A + GI E +R +I F R Sbjct: 111 RAAG----IAVTTGICESEARAMIAGFLTRR 137 >gi|256823992|ref|YP_003147952.1| cytosine/adenosine deaminase [Kytococcus sedentarius DSM 20547] gi|256687385|gb|ACV05187.1| cytosine/adenosine deaminase [Kytococcus sedentarius DSM 20547] Length = 175 Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 2/110 (1%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAVLNNKIISR-AGNRNRELKDVTAHAEILAIRMGCRI 65 M+ A++ +P VG V + +++S N+ E D AHAE++A+R Sbjct: 12 MAQAVDACTEHVDAGGLPFVGVVVNADGEMLSEFGVNQVAETGDPMAHAEVVAMRDAMTR 71 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + L L T EPC +C I +Y + + + Sbjct: 72 HGLDSLTGYTLLATGEPCGLCYRYAVDHGIDTIYVAVDREEVANLGFDYR 121 >gi|320589823|gb|EFX02279.1| cmp/dcmp deaminase, zinc-binding protein [Grosmannia clavigera kw1407] Length = 178 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 10/102 (9%) Query: 8 MSCALEEAQNAA-LRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTA--HAEILAIRMGC 63 M+ LE NA + P + V +N+ + + V+ HAE R+ Sbjct: 25 MTKVLELQHNAHTQHGKRPFAGILVGPDNETVLLLH------QSVSHVEHAEASLARLAA 78 Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 SQ L LY T EPC MC A I A I R+ +GASN Sbjct: 79 NHYSQPYLWTCTLYSTWEPCAMCTATIYWANIGRVIFGASND 120 >gi|310799415|gb|EFQ34308.1| cytidine and deoxycytidylate deaminase zinc-binding region [Glomerella graminicola M1.001] Length = 247 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 45/119 (37%), Gaps = 26/119 (21%) Query: 6 VFMSCALEEAQNAALRNEIPV---GAVAVLN-----NKIISRAGNRNRELKDVTAHAEIL 57 +M A N AL N P G+V V + +++ N+N + T H E++ Sbjct: 63 YWMRQA-----NLALPNPCPFAAFGSVVVNHTAAGLGELVCTGANKNSVTGNPTFHGEMV 117 Query: 58 AIRMGCRILSQEI-------------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 AI I ++ LY E C MCA+AI A + YG S Sbjct: 118 AINNCSAIFVDPQGPFKMTPAEALAAFADLTLYTNAESCPMCASAIRWAGFKEYVYGTS 176 >gi|288931740|ref|YP_003435800.1| CMP/dCMP deaminase zinc-binding protein [Ferroglobus placidus DSM 10642] gi|288893988|gb|ADC65525.1| CMP/dCMP deaminase zinc-binding protein [Ferroglobus placidus DSM 10642] Length = 149 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 50/142 (35%), Gaps = 30/142 (21%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 FM A A+ + + VGAV V + +I+S N EL Sbjct: 6 DEYFMEIAKVVAKRSTCLRQN-VGAVIVKDKRILSTGYNGAPMGLPHCLDIGCLREELNV 64 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE AI + + LY T +PC MCA I A I R+ Y Sbjct: 65 PSGERHELCRAVHAEQNAIIQAA--VHGVSIKGATLYTTHQPCIMCAKMIINAGIVRVVY 122 Query: 101 GASNPKGGGIENGTQFYTLATC 122 G K E G +F A Sbjct: 123 G----KRYADERGLEFLKEAGI 140 >gi|296272024|ref|YP_003654655.1| riboflavin biosynthesis protein RibD [Arcobacter nitrofigilis DSM 7299] gi|296096199|gb|ADG92149.1| riboflavin biosynthesis protein RibD [Arcobacter nitrofigilis DSM 7299] Length = 335 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 64/175 (36%), Gaps = 41/175 (23%) Query: 3 KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M A++EA P VG V V N +I++ ++ + +HAE+ A+ Sbjct: 4 DDKFYMKLAIDEAWK-YQLLTYPNPAVGCVVVKNGEILAIEAHKEAGM----SHAEVNAL 58 Query: 60 RMG---------------CRILSQEIL-------PEVDLYVTLEPC------TMCAAAIS 91 + R + + +L + ++YVTLEPC CA + Sbjct: 59 KAAYLKKHANDTLKIKKSSREIHEYLLKNHNNFFNDCEIYVTLEPCNHIGKTPSCANLLK 118 Query: 92 LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + +R+ + TL + + +I ++ + ++ F K Sbjct: 119 ELKPKRVIIAHEDTNKQASGG---IQTLESVN--IDITLDCMKKEAYDLLYPFIK 168 >gi|54022042|ref|YP_116284.1| putative reductase/deaminase [Nocardia farcinica IFM 10152] gi|54013550|dbj|BAD54920.1| putative reductase/deaminase [Nocardia farcinica IFM 10152] Length = 373 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 41/118 (34%), Gaps = 24/118 (20%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP------VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55 ++ F+ A+E A + P VGAV V + I+ +R D HAE Sbjct: 226 ERDRRFLRRAIELAHAS-----PPSPTAFSVGAVIVADGAEIATGYSR---ETDPKVHAE 277 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPC--------TMCAAAISLARIRRLYYGASNP 105 A+ L +Y TLEPC C I A I R+ P Sbjct: 278 EAALNKL--DPRDPRLSRATIYSTLEPCSQRATAGRPPCTDRILAAGIPRVVIAWREP 333 >gi|326318264|ref|YP_004235936.1| riboflavin biosynthesis protein RibD [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375100|gb|ADX47369.1| riboflavin biosynthesis protein RibD [Acidovorax avenae subsp. avenae ATCC 19860] Length = 377 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 38/147 (25%), Positives = 54/147 (36%), Gaps = 19/147 (12%) Query: 7 FMSCALEEAQNAALRNEI-P-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL A+ R P VG V V +II + + HAE++A+R Sbjct: 14 FMQLALRLAEEGLYRTSPNPRVGCVLVDARQQIIGQGSTQRAGG----PHAEVMALRDAR 69 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 YVTLEPC+ C A+ A I R+ +P G + Sbjct: 70 ARGHAT--QGAIAYVTLEPCSHHGRTGPCCDALVEAGIARVVASLGDPNPRVAGQGFERL 127 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G + SR++ F Sbjct: 128 RAAG----VEVEVGPGAEASRELNIGF 150 >gi|310826939|ref|YP_003959296.1| hypothetical protein ELI_1347 [Eubacterium limosum KIST612] gi|308738673|gb|ADO36333.1| hypothetical protein ELI_1347 [Eubacterium limosum KIST612] Length = 159 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 42/119 (35%), Gaps = 24/119 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRN-----------RELK 48 + FM AL A+ + VGA V +NKI++ N Sbjct: 7 LSWDEYFMGIALLAAKRSKDPG-TQVGACIVSPDNKILTMGYNGMPTGCHDDNMPWEREG 65 Query: 49 DVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D HAE AI L LY TL PC CA AI + I+++ Y Sbjct: 66 DPLETKYLYVCHAEFNAILN----NGGRSLKGATLYATLFPCNECAKAIIQSGIQKVIY 120 >gi|255071429|ref|XP_002499388.1| hypothetical protein MICPUN_112644 [Micromonas sp. RCC299] gi|226514651|gb|ACO60647.1| hypothetical protein MICPUN_112644 [Micromonas sp. RCC299] Length = 353 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 69/208 (33%), Gaps = 73/208 (35%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN---NKIISRAGNRNRELK--------- 48 MK+ +M ++ A+ N A+ V +I+R + R + Sbjct: 146 MKR---WMRSCIDVAREGGATN----AAIVVDPSGPGTVIARGLDETRAWRCVGRGNGHL 198 Query: 49 ----DVTAHAEILAIRMGCRI--------------------------------------- 65 H ++AI R Sbjct: 199 GGNGHPLRHCALVAIDDAARRDAETYPAGEDEKNGLSSAPEPTPPDRSEVGEKRRRGETL 258 Query: 66 --------LSQEIL-PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ- 115 L + L D Y+ EPC MCA A++ +R+RR+ +GA +P G + G Sbjct: 259 SASEMTETLGRPYLCTGYDAYLVREPCVMCAMALTHSRVRRVIFGAGSPGNGALGGGKHS 318 Query: 116 FYTLATCHHSPEIYP-GISEQRSRQIIQ 142 + T +H ++Y G+S + +++ Sbjct: 319 LHGQRTLNHHYQVYTFGLSGEEMDNLVR 346 >gi|218673496|ref|ZP_03523165.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase protein [Rhizobium etli GR56] Length = 419 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 19/117 (16%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VG + V + + +A HAE A+ ++ YVTLEPC Sbjct: 12 VGCLIVKDGVTVGQA----VTALGGRPHAEPQALAEAGQLA-----RGATAYVTLEPCSH 62 Query: 84 ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136 CA A+ + + R+ ++P G A E+ G+ + Sbjct: 63 HGKTPPCAEALIASGVARVVISVTDPDPRVSGRGVSMLRDAG----IEVDAGVLQAE 115 >gi|260904122|ref|ZP_05912444.1| riboflavin biosynthesis protein RibD [Brevibacterium linens BL2] Length = 359 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 48/139 (34%), Gaps = 17/139 (12%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 MS AL+ A+N VGA + + I + + HAE+ AI I Sbjct: 13 MSAALQAARNGHRGANPLVGAAILTRDSQIVVGHHA----GAGSPHAEVDAITTA--IDL 66 Query: 68 QEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 L L+VTLEPC C AI A I + + S+ G G Sbjct: 67 GVDLTASTLFVTLEPCNHIGRTGPCTQAIIDAGIPEVVFALSDSNGVAAGGGATLAEA-- 124 Query: 122 CHHSPEIYPGISEQRSRQI 140 + G+ S + Sbjct: 125 ---GVRVRSGLGHDESSAL 140 >gi|88856442|ref|ZP_01131100.1| riboflavin-specific deaminase [marine actinobacterium PHSC20C1] gi|88814309|gb|EAR24173.1| riboflavin-specific deaminase [marine actinobacterium PHSC20C1] Length = 345 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 26/150 (17%) Query: 5 NVFMSCALEEAQNAALRNEIP-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62 M L A + P VG V V + +I++ + T HAE+ A+ Sbjct: 11 EKLMLHGLSLASRGPITGGNPQVGCVLVNDAGEIVAEGWHH----GAGTPHAEVDALTKL 66 Query: 63 CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP--KGGGIENGT 114 + VTLEPC C+ A+ A + R+ Y S+P + GG G+ Sbjct: 67 G-----GNAAGLTAVVTLEPCNHHGRTGPCSEALIDAGVSRVVYAVSDPGVRSGG---GS 118 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 Q A E+ G S+ + + + + Sbjct: 119 QRLRDAG----VEVIGGASQADAEEFLHSW 144 >gi|315636537|ref|ZP_07891773.1| riboflavin biosynthesis protein RibD [Arcobacter butzleri JV22] gi|315479186|gb|EFU69883.1| riboflavin biosynthesis protein RibD [Arcobacter butzleri JV22] Length = 334 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 60/176 (34%), Gaps = 42/176 (23%) Query: 1 MK-KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEI 56 MK N +M A++EA L VG V V N ++++ A +E HAE+ Sbjct: 1 MKIDDNFYMRLAIDEAWKHQLLTYPNPAVGCVIVKNQRLLAVEAH---KEAGMP--HAEV 55 Query: 57 LAIRMG----------------------CRILSQEILPEVDLYVTLEPC------TMCAA 88 A++ + ++YVTLEPC CA Sbjct: 56 NALKTAYLKDNPNSILKTKNSSFDIHQFLLHNHNGFFNDCEIYVTLEPCNHIGKTPSCAN 115 Query: 89 AISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + + +R+ +P + + ++ GI E+ +I F Sbjct: 116 LLKELKPKRVIISVKDPNKQATGGLETLK-----NENIDVTLGILEKDGLNLILPF 166 >gi|307297235|ref|ZP_07577041.1| CMP/dCMP deaminase zinc-binding [Thermotogales bacterium mesG1.Ag.4.2] gi|306916495|gb|EFN46877.1| CMP/dCMP deaminase zinc-binding [Thermotogales bacterium mesG1.Ag.4.2] Length = 168 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 28/127 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR----------NRELKDVT-- 51 + FM A + + ++ VGA+ V N+I+S N+ ++D Sbjct: 27 DSYFMRLAYQVRERSSCH-HRKVGALIVRENRILSTGYNQPPSGFPHCDETECIRDALGI 85 Query: 52 -----------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 AHAE AI + +YVT PC++CA I A I+R+ + Sbjct: 86 PSGQNQEICYAAHAEQNAIAQAAKFGIATN--GSTIYVTHRPCSVCARLIINAGIKRVVF 143 Query: 101 --GASNP 105 G +P Sbjct: 144 SEGYPDP 150 >gi|320169275|gb|EFW46174.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 1344 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 50/151 (33%), Gaps = 28/151 (18%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPV------GAVAVLNNKIISRAGNRNRELKDVTAHAE 55 +M+ A+++A + +PV G V V N ++S +R HAE Sbjct: 1190 SNDWRYMAMAIQQANQS-----VPVETAYCVGCVIVQNGVVLSSGFSRELPGN---THAE 1241 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPKGG 108 + L+ E +Y T+EPCT C I RI R+ G P Sbjct: 1242 ----ECALKKLTPEQAQGATVYTTMEPCTTRLSGNVCCTDHIINNRIARVVIGVREPAEF 1297 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 + G A G E Q Sbjct: 1298 VVCIGIDRLEKAGI--QVTRLSG-LELECLQ 1325 >gi|254449430|ref|ZP_05062867.1| riboflavin biosynthesis protein RibD [Octadecabacter antarcticus 238] gi|198263836|gb|EDY88106.1| riboflavin biosynthesis protein RibD [Octadecabacter antarcticus 238] Length = 359 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 44/143 (30%), Gaps = 27/143 (18%) Query: 8 MSCALEEAQNAALR-NEIP-VGAVAVLN----NKIISRAGNRNRELKDVTAHAEILAIRM 61 M AL + R P VG V V ++I R HAE A+ Sbjct: 1 MGMALSLGRRGLGRVWPNPNVGCVIVRPCENGGRVIGRGW----TADGGRPHAETRALD- 55 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 YVTLEPC C A+ A + R+ +P G Sbjct: 56 ------SIDAAGATAYVTLEPCAHHAKTPPCVDALIAANVSRVVIATGDPDPRVAGKGIA 109 Query: 116 FYTLATCHHSPEIYPGISEQRSR 138 A ++ G+ E +R Sbjct: 110 ILRAAG----IDVMIGVREDEAR 128 >gi|299135084|ref|ZP_07028275.1| riboflavin biosynthesis protein RibD [Afipia sp. 1NLS2] gi|298590061|gb|EFI50265.1| riboflavin biosynthesis protein RibD [Afipia sp. 1NLS2] Length = 377 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 52/145 (35%), Gaps = 21/145 (14%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + + FM AL + R VGAV V + I+ R + HAE +A++ Sbjct: 12 EDHRFMQLALALGRRGQGRTWPNPAVGAVVVKDGVILGRGWTQPGGR----PHAEPVALQ 67 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + LYVTLEPC CA AI A I R+ +P G Sbjct: 68 RAGKAA-----KGATLYVTLEPCSHHGKSPPCADAIIAAGIARVMSAIEDPNPEVAGQGH 122 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139 A ++ G+ + + Sbjct: 123 ARLRDAG----IQVDVGLYRDEAAR 143 >gi|288957859|ref|YP_003448200.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Azospirillum sp. B510] gi|288910167|dbj|BAI71656.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Azospirillum sp. B510] Length = 376 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 49/152 (32%), Gaps = 18/152 (11%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + M AL A R VG V V + +I R + HAE A+ Sbjct: 8 ETDLRHMRAALALAGRGLGRTWPNPAVGCVLVRDGAVIGRGWTQPGGR----PHAETEAL 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 YVTLEPC CA A+ AR+ R+ +P G Sbjct: 64 ARARACSGGA--EGATAYVTLEPCNHYGRTPPCALALVEARVARVVVACQDPDPRVAGGG 121 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 A + G+ E + + + FF Sbjct: 122 LARLRDAG----IAVTTGLCEAEALALNEGFF 149 >gi|58427937|gb|AAW76974.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 316 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 17/149 (11%) Query: 10 CALEEAQ-NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A++ ++ N + P GAV +++II+ A NR AHAE +A + + L Sbjct: 163 LAIKLSRMNVQEHSGGPFGAVVFGPDHRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQ 222 Query: 68 QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122 L V L + +PC C A A I RL GA + TQF Sbjct: 223 TPRLNAVLSPITLATSAQPCCQCYGATVWAGIDRLLIGARADDVMAL---TQFDEGPLPA 279 Query: 123 -------HHSPEIYPGISEQRSRQIIQDF 144 E+ + ++ +++++ Sbjct: 280 DWVGELTRRGIEVVRDVLRDQACAVLRNY 308 >gi|326384274|ref|ZP_08205956.1| CMP/dCMP deaminase zinc-binding protein [Gordonia neofelifaecis NRRL B-59395] gi|326197139|gb|EGD54331.1| CMP/dCMP deaminase zinc-binding protein [Gordonia neofelifaecis NRRL B-59395] Length = 148 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 2/110 (1%) Query: 12 LEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70 + A+ A + P G++ V + NR D T H E R + L++E Sbjct: 1 MSLAREALDEGDQPFGSLVVDAAGDVRFADRNRV-SGGDHTRHPEFAIARWAAKNLTEEQ 59 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + +Y + E C MC+AA + + R+ Y AS + + + T Sbjct: 60 RAQATVYTSGEHCPMCSAAHAWVGLGRIVYAASAEQLTAWQTAWELPTAP 109 >gi|194333660|ref|YP_002015520.1| CMP/dCMP deaminase [Prosthecochloris aestuarii DSM 271] gi|194311478|gb|ACF45873.1| CMP/dCMP deaminase zinc-binding [Prosthecochloris aestuarii DSM 271] Length = 174 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 43/121 (35%), Gaps = 27/121 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42 FMS A A+ A +GAV V +N I+S N Sbjct: 29 HEYFMSVAHLIAKRATCTRGH-IGAVVVRDNNILSTGYNGAPSGLPHCNETNCKIYRSVH 87 Query: 43 ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 E T HAEI AI + + + D+Y+T PC C + IR +Y Sbjct: 88 PDGTVEENCVNTIHAEINAIAQAAKHGVS--IKDADIYITASPCIHCLKVLINVGIRTIY 145 Query: 100 Y 100 Y Sbjct: 146 Y 146 >gi|333028400|ref|ZP_08456464.1| putative riboflavin/cytosine deaminase [Streptomyces sp. Tu6071] gi|332748252|gb|EGJ78693.1| putative riboflavin/cytosine deaminase [Streptomyces sp. Tu6071] Length = 372 Score = 77.6 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 51/142 (35%), Gaps = 25/142 (17%) Query: 8 MSCALEEAQNAALR---NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+ A R N + VG V + + ++ R ++ HAEI A+R Sbjct: 18 MREAIALAARGLGRTRPNPV-VGCVVLDASGEVAGRGWHQRAGG----PHAEIHALRAAG 72 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 E VTLEPC C+ A+ A +RR+ + ++P Sbjct: 73 -----ERARGGTALVTLEPCDHTGRTGPCSRALIEAGVRRVVHAVADPTDQATGGADTLR 127 Query: 118 TLATCHHSPEIYPGISEQRSRQ 139 ++ G+ E+ + Sbjct: 128 AA-----GVDVEHGLLEREAAD 144 >gi|315503254|ref|YP_004082141.1| riboflavin biosynthesis protein ribd [Micromonospora sp. L5] gi|315409873|gb|ADU07990.1| riboflavin biosynthesis protein RibD [Micromonospora sp. L5] Length = 353 Score = 77.6 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 25/142 (17%) Query: 8 MSCALEEAQN---AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+E A A N + VG V + + +++ + HAEI+A+ Sbjct: 10 MRRAIELAARGLGATSPNPV-VGCVLLDTDGEVVGEGFHAYAGG----PHAEIVALAQAG 64 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 VTLEPC C+ A+ A + R+ +P Sbjct: 65 -----TRARGGTAVVTLEPCDHTGRTGPCSHALIAAGVSRVVIAVPDPNPVASGGAATLR 119 Query: 118 TLATCHHSPEIYPGISEQRSRQ 139 ++ G+ Q + Sbjct: 120 AA-----GVQVALGVRAQEAEA 136 >gi|255084043|ref|XP_002508596.1| ytidine and deoxycytidylated deaminase zinc-binding protein [Micromonas sp. RCC299] gi|226523873|gb|ACO69854.1| ytidine and deoxycytidylated deaminase zinc-binding protein [Micromonas sp. RCC299] Length = 443 Score = 77.6 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 33/125 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42 +K + FMS A AQ + P VGAV V +++I N Sbjct: 153 LKWDDYFMSVAFLSAQRSKD----PNKQVGAVIVGPDRVIMGVGYNGFPRGCSDSDLPWA 208 Query: 43 RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 + + HAE+ AI + + L +YVT+ PC CA I + I Sbjct: 209 KKSTNGNPMETKYAYVCHAEMNAIMN----KNSQSLHGATVYVTMYPCNECAKLIIQSGI 264 Query: 96 RRLYY 100 R + Y Sbjct: 265 REVVY 269 >gi|327393622|dbj|BAK11044.1| diaminohydroxyphosphoribosulpyrimidine deaminase ribD [Pantoea ananatis AJ13355] Length = 124 Score = 77.6 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 15/87 (17%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83 PVG V V + +++++ + HAEI AI + E ++YVTLEPC Sbjct: 6 PVGCVIVHDGEVVAKGFTQPPGQH----HAEIDAI-----AKLTFPISECEIYVTLEPCS 56 Query: 84 -----TMCAAAISLARIRRLYYGASNP 105 CA I+ + + +Y +P Sbjct: 57 FQGRTPSCALTIAELKPKHIYIAMDDP 83 >gi|300743929|ref|ZP_07072949.1| guanine deaminase [Rothia dentocariosa M567] gi|300380290|gb|EFJ76853.1| guanine deaminase [Rothia dentocariosa M567] Length = 163 Score = 77.6 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 39/109 (35%), Gaps = 1/109 (0%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+ + +P V V + +S NR E D +AHAE++A+R L Sbjct: 11 MVEAVHQCIQHVDSGGLPFVGVVVQSGVAVSNFGFNRVYETGDASAHAEVVAMRDAMSRL 70 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 L L T EPC +C + +Y A + Sbjct: 71 KCSDLSGTVLLATGEPCGLCYRFAQNCGVDAIYVAADREEAASWGFDYH 119 >gi|25027211|ref|NP_737265.1| hypothetical protein CE0655 [Corynebacterium efficiens YS-314] gi|259506652|ref|ZP_05749554.1| cytidine/deoxycytidylate deaminase [Corynebacterium efficiens YS-314] gi|23492492|dbj|BAC17465.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259165736|gb|EEW50290.1| cytidine/deoxycytidylate deaminase [Corynebacterium efficiens YS-314] Length = 159 Score = 77.6 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 2/100 (2%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 + +++ ++ A A + P G+V V + +++ NR D T H E R Sbjct: 4 ETDMFYLNRSVALAAIALDKGNSPYGSVLVADTGQVLFEDHNR-DGNGDDTRHPEFEIAR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L+ + +Y + E C MCAAA + + R+ Y Sbjct: 63 WAATNLTADQRAISVVYTSTEHCPMCAAAHAWVGLGRIIY 102 >gi|281419672|ref|ZP_06250671.1| cytidine/deoxycytidylate deaminase family protein [Prevotella copri DSM 18205] gi|281406201|gb|EFB36881.1| cytidine/deoxycytidylate deaminase family protein [Prevotella copri DSM 18205] Length = 150 Score = 77.6 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 14/111 (12%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDVT--- 51 K ++ A A+N+ + VGA+ V + IIS N E +VT Sbjct: 10 KLDLRYLRMARIWAENSYCKR-RQVGALVVKDKMIISDGYNGTPSGFENVCEDNNVTKPY 68 Query: 52 -AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC CA I + I+R+ Y Sbjct: 69 VLHAEANAITKLARSSNNS--EGSTLYVTASPCIECAKLIIQSGIKRVVYA 117 >gi|108799353|ref|YP_639550.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. MCS] gi|119868469|ref|YP_938421.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. KMS] gi|126435011|ref|YP_001070702.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. JLS] gi|108769772|gb|ABG08494.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. MCS] gi|119694558|gb|ABL91631.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. KMS] gi|126234811|gb|ABN98211.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. JLS] Length = 333 Score = 77.6 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 54/152 (35%), Gaps = 24/152 (15%) Query: 8 MSCALEEAQ--NAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M+ A+E+A PVGAV + + ++ + HAE++A+R R Sbjct: 7 MALAVEQADRVKGGTYPNPPVGAVILDADGEVAGVGATQPPGG----PHAEVMALRRAGR 62 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 VTLEPC C A+ A + + Y +P + Sbjct: 63 KA-----AGGTAVVTLEPCNHHGRTPPCVDALLAAEVSAVVYAVPDPNPVAAGGAARLGE 117 Query: 119 LATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149 + G+ + +++++ ++R Sbjct: 118 S-----GVTVTAGVLGDAVAGGVLREWLHKQR 144 >gi|54025280|ref|YP_119522.1| putative pyrimidine deaminase [Nocardia farcinica IFM 10152] gi|54016788|dbj|BAD58158.1| putative pyrimidine deaminase [Nocardia farcinica IFM 10152] Length = 149 Score = 77.6 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 14/114 (12%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 M + +M+ A+E A+ VGAV V + I+ +R +LK HAE A+ Sbjct: 1 MTTDHHWMNRAIELARRCPPAPGAFSVGAVIVADGIEIASGYSRETDLK---VHAEEAAL 57 Query: 60 RMGCRILSQEILPEVDLYVTLEPC--------TMCAAAISLARIRRLYYGASNP 105 L +Y TLEPC C + I R+ P Sbjct: 58 DKL--DPHDPRLSRATIYSTLEPCSERATTTRLPCTDRVLAVGIPRVVIAWREP 109 >gi|291299218|ref|YP_003510496.1| CMP/dCMP deaminase zinc-binding protein [Stackebrandtia nassauensis DSM 44728] gi|290568438|gb|ADD41403.1| CMP/dCMP deaminase zinc-binding protein [Stackebrandtia nassauensis DSM 44728] Length = 163 Score = 77.6 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + + ++ A+ A + P G++ V ++ R D T H E + Sbjct: 8 ETDRQHLRRCVDLAREALDAGDDPFGSLLVDGAGVVRREERNRERSVDATCHPEFALAKW 67 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 LS + + +Y + E C MC+AA + + R+ Y AS Sbjct: 68 AGANLSPDERRDSVVYTSGEHCPMCSAAHAWVGLGRIVYVAS 109 >gi|317154550|ref|YP_004122598.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio aespoeensis Aspo-2] gi|316944801|gb|ADU63852.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio aespoeensis Aspo-2] Length = 176 Score = 77.6 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 3/88 (3%) Query: 22 NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE--ILPEVDLYV 78 E P GAV + ++ +D T HAE + CR + LY Sbjct: 33 GEGPFGAVVAGPDGMVVMTQQAETIATQDHTRHAEAVLASRFCRAHYDDPAFRAGSTLYS 92 Query: 79 TLEPCTMCAAAISLARIRRLYYGASNPK 106 ++EPC MC A+ A I RL YG S + Sbjct: 93 SMEPCAMCMFAMFKAGIGRLVYGLSAER 120 >gi|84496639|ref|ZP_00995493.1| riboflavin biosynthesis protein RibD [Janibacter sp. HTCC2649] gi|84383407|gb|EAP99288.1| riboflavin biosynthesis protein RibD [Janibacter sp. HTCC2649] Length = 341 Score = 77.6 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 49/156 (31%), Gaps = 22/156 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 +M AL + P VG V V + +++ ++ T HA Sbjct: 6 TTDEQWMLRALVVGAFGPESDANPRVGCVLVDPDGALVAEGWHQ----GAGTPHA----- 56 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 + E YVTLEPC C+ A++ A + R+ Y S+P Sbjct: 57 EAAALAAAGERAKGCTAYVTLEPCNHTGRTEPCSHALAAAGVSRVVYAVSDPNASAAGGA 116 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G+ E + + + + R Sbjct: 117 AWLAE-----RGVATEGGLLEAEATALNRSWLHRIR 147 >gi|270263547|ref|ZP_06191816.1| hypothetical protein SOD_e01710 [Serratia odorifera 4Rx13] gi|270042431|gb|EFA15526.1| hypothetical protein SOD_e01710 [Serratia odorifera 4Rx13] Length = 369 Score = 77.6 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 54/157 (34%), Gaps = 21/157 (13%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M +M+ A E A+ P VG V V + +I+ + HAE+ A Sbjct: 1 MHNDEFYMARAFELARLGRFTTAPNPNVGCVIVRDGEIVGEGYHLRAGE----PHAEVHA 56 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 +RM YVTLEPC CA A+ A + R+ +P Sbjct: 57 LRMAGARARGAT-----AYVTLEPCSHHGRTPPCADALVAAGVARVVAAMQDPNPEVAGR 111 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A ++ G+ + + F K R Sbjct: 112 GLYKLQQAG----IDVRHGLMLSDAEAVNPGFLKRMR 144 >gi|297155739|gb|ADI05451.1| putative riboflavin/cytosine deaminase [Streptomyces bingchenggensis BCW-1] Length = 378 Score = 77.6 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 50/152 (32%), Gaps = 25/152 (16%) Query: 8 MSCALEEAQNAALR---NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+ A N + VG V + + + ++ HAE+ A+R Sbjct: 10 MRRAIALAARGLGHTSPNPV-VGCVILDADGRTAGEGWHQRAGG----PHAEVHALRAAG 64 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 E VTLEPC CA A+ A I R+ Y ++P Sbjct: 65 -----ERARGGTAVVTLEPCNHTGRTGPCAQALLDAGIVRVVYAVADPNAKAAGGAATLA 119 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 T + G+ ++ + + + R Sbjct: 120 AAGTA-----VESGLLADQAAAVNEAWLTSMR 146 >gi|38233905|ref|NP_939672.1| putative riboflavin biosynthesis protein [Corynebacterium diphtheriae NCTC 13129] gi|38200166|emb|CAE49847.1| Putative riboflavin biosynthesis protein [Corynebacterium diphtheriae] Length = 334 Score = 77.6 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 22/112 (19%) Query: 11 ALEEAQNAA--LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A++E + A PVGAV + N I+ R + +HAEI+A+R Sbjct: 11 AVQEGEKAWGTTHPNPPVGAVVLSSNGSIVGRGHTQPPGG----SHAEIMALRQAG---- 62 Query: 68 QEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASN----PKGGG 109 E L VTLEPC C+ AIS + I + Y + KGG Sbjct: 63 -ENTKGGTLVVTLEPCNHWGRTGPCSHAISESGIEHVVYLMQDTGSLEKGGA 113 >gi|302866839|ref|YP_003835476.1| riboflavin biosynthesis protein RibD [Micromonospora aurantiaca ATCC 27029] gi|302569698|gb|ADL45900.1| riboflavin biosynthesis protein RibD [Micromonospora aurantiaca ATCC 27029] Length = 353 Score = 77.3 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 25/142 (17%) Query: 8 MSCALEEAQN---AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+E A A N + VG V + + +++ + HAEI+A+ Sbjct: 10 MRRAIELAVRGLGATSPNPV-VGCVLLDTDGEVVGEGFHAYAGG----PHAEIVALAQAG 64 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 VTLEPC C+ A+ A + R+ +P Sbjct: 65 -----TRARGGTAVVTLEPCDHTGRTGPCSHALIAAGVSRVVIAVPDPNPVASGGAATLR 119 Query: 118 TLATCHHSPEIYPGISEQRSRQ 139 ++ G+ Q + Sbjct: 120 AA-----GVQVALGVRAQEAEA 136 >gi|313205464|ref|YP_004044121.1| cmp/dcmp deaminase zinc-binding protein [Paludibacter propionicigenes WB4] gi|312444780|gb|ADQ81136.1| CMP/dCMP deaminase zinc-binding protein [Paludibacter propionicigenes WB4] Length = 141 Score = 77.3 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 N +M A A+N+ VGA+ V N IIS N + +V+ Sbjct: 9 DNRYMRMARIWAENSYCERRK-VGALLVKNQMIISDGYNGTPSGFENKCEDENNVSKPYV 67 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC CA I A I+R+ YG Sbjct: 68 LHAEANAISKIARSHNSSD--NATLYVTASPCIECAKLIIQAGIKRVVYG 115 >gi|85706317|ref|ZP_01037411.1| riboflavin biosynthesis protein RibD [Roseovarius sp. 217] gi|85669090|gb|EAQ23957.1| riboflavin biosynthesis protein RibD [Roseovarius sp. 217] Length = 364 Score = 77.3 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 46/149 (30%), Gaps = 21/149 (14%) Query: 4 GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM+ AL + + VG V V I+ R HAE A+ Sbjct: 5 DARFMALALSLGRRGMGQCAPNPAVGCVIVQGRHIVGRGWTAPGGR----PHAETQALAQ 60 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YV+LEPC CA A+ A I R+ + G Sbjct: 61 AGDLA-----RGATAYVSLEPCAHHGKTPPCADALIAAGITRVVAPFDDNDPRVAGRGFA 115 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ + + + F Sbjct: 116 RLRAAG----IEVRTGVLADVAGRDLAGF 140 >gi|152964097|ref|YP_001359881.1| riboflavin biosynthesis protein RibD [Kineococcus radiotolerans SRS30216] gi|151358614|gb|ABS01617.1| riboflavin biosynthesis protein RibD [Kineococcus radiotolerans SRS30216] Length = 338 Score = 77.3 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 25/147 (17%) Query: 8 MSCALEEAQNAALR---NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M+ A+ A N + VG V + ++ + HAE+ A+ Sbjct: 7 MARAVALAARGLGTTSPNPV-VGCVVLDAAGEVAGEGWHERAGG----PHAEVNALAAAG 61 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + YVTLEPC C A+ A I R+ + ++P + Sbjct: 62 -----DRARGGTAYVTLEPCNHTGRTGPCVQALLRAGIARVVFAVADPGALAGGGARELR 116 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144 E+ G+ + + ++ + + Sbjct: 117 AA-----GVEVVAGVLAEEAERVNEAW 138 >gi|301093219|ref|XP_002997458.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262110714|gb|EEY68766.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 149 Score = 77.3 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 49/151 (32%), Gaps = 29/151 (19%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP------VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55 + FM A+ EA + P VG V V + ++S +R HAE Sbjct: 6 ESDVAFMRLAVAEAHRSQ-----PSENAYCVGCVVVRDGLVLSTGFSRELPGN---THAE 57 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGG 108 +A+ +Y T+EPC C + A + R+ G PK Sbjct: 58 QVAL-----HKLNFEAQGATVYTTMEPCSTRVSGNVPCVQSCLRAGVARVVIGVMEPKTF 112 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 I G Q A ++ G E Sbjct: 113 VICKGVQLLQEARVD--VKLLKG-LEADCLA 140 >gi|323344020|ref|ZP_08084246.1| cytidine/deoxycytidylate deaminase [Prevotella oralis ATCC 33269] gi|323094749|gb|EFZ37324.1| cytidine/deoxycytidylate deaminase [Prevotella oralis ATCC 33269] Length = 148 Score = 77.3 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT-- 51 K ++ A A+N+ + VGA+ V N IIS N + +T Sbjct: 10 KLDLRYLRMARVWAENSYCKR-RQVGALVVKNKMIISDGYNGTPSGFENVCEDENSITKP 68 Query: 52 --AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC CA I A I+R+ YG Sbjct: 69 YVLHAEANAITKLARSSNNSD--GSTLYVTASPCIECAKLIIQAGIKRVVYG 118 >gi|260939908|ref|XP_002614254.1| hypothetical protein CLUG_05740 [Clavispora lusitaniae ATCC 42720] gi|238852148|gb|EEQ41612.1| hypothetical protein CLUG_05740 [Clavispora lusitaniae ATCC 42720] Length = 109 Score = 77.3 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 44/106 (41%), Gaps = 10/106 (9%) Query: 43 RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 + T H EI + R+ + +Y TL PC MC+ A + ++R+ G Sbjct: 1 MRIQKNSATLHGEISTLENAGRLPGG-VYKNCTMYTTLSPCHMCSGACLMYGVKRVVLG- 58 Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 N G E + + + +++++ ++++ F +ER Sbjct: 59 ENENFVGAEKLLESMGVEVVN--------MNDEKCKELMSRFIRER 96 >gi|331701117|ref|YP_004398076.1| ComE operon protein 2 [Lactobacillus buchneri NRRL B-30929] gi|329128460|gb|AEB73013.1| ComE operon protein 2 [Lactobacillus buchneri NRRL B-30929] Length = 158 Score = 77.3 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 44/115 (38%), Gaps = 18/115 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49 +K FM A+ A + + VGAV V + +II+ N + D Sbjct: 5 IKWDQYFMMQAVLLASRSTCER-LSVGAVIVRDKRIIAGGYNGSVAGDDHCIDVGCYLED 63 Query: 50 ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI + ++YVT PC C + A I ++ Y Sbjct: 64 GHCVRTIHAEMNAILQCAKFGESTD--NAEIYVTDFPCLQCTKMLLQAGITKINY 116 >gi|54024974|ref|YP_119216.1| putative cytidine/deoxycytidylate deaminase [Nocardia farcinica IFM 10152] gi|54016482|dbj|BAD57852.1| putative cytidine/deoxycytidylate deaminase [Nocardia farcinica IFM 10152] Length = 202 Score = 77.3 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 52/151 (34%), Gaps = 15/151 (9%) Query: 9 SCAL--EEAQNAALRN-EIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 AL A P A+ V + +++S N AHAE+ A+ + Sbjct: 35 RMALVHRLAARNPREGAGGPFAALVVDSRSGEVVSAGVNLVLSSGLSVAHAEVTALSLAQ 94 Query: 64 RILSQEILPEVD-----LYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGGIENGT 114 + L D L V PC C A+ + ++RL P+ G E Sbjct: 95 TRVRAWDLGAADAPQRELVVNWRPCAQCYGAVLWSGVKRLVVAGEGPEVEQLTGFDEGPM 154 Query: 115 QFYTLATCHHS-PEIYPGISEQRSRQIIQDF 144 + A E+ G+ +++ + +F Sbjct: 155 REDWAAQLRRRGIEVVVGVLREQALDVFAEF 185 >gi|222148205|ref|YP_002549162.1| bifunctional riboflavin deaminase-reductase [Agrobacterium vitis S4] gi|221735193|gb|ACM36156.1| bifunctional riboflavin deaminase-reductase [Agrobacterium vitis S4] Length = 366 Score = 76.9 bits (189), Expect = 8e-13, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 49/144 (34%), Gaps = 21/144 (14%) Query: 3 KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM+ A+ + VG V V + I+ A HAE AI Sbjct: 7 DDQRFMAAAIRLGRSHLGQTLTNPSVGCVIVADGTIVGSA----VTAIGGRPHAERQAIA 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ A + R+ ++P G Sbjct: 63 VAGEKA-----RGATAYVTLEPCSHHGKTPPCADALVEAGVARVVVAVTDPDPRVSGRGL 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSR 138 T A E+ G+ E+ +R Sbjct: 118 SILTDAG----IEVVTGVLEREAR 137 >gi|157736310|ref|YP_001488993.1| dCMP deaminase, putative [Arcobacter butzleri RM4018] gi|315635442|ref|ZP_07890708.1| CMP/dCMP deaminase [Arcobacter butzleri JV22] gi|157698164|gb|ABV66324.1| dCMP deaminase, putative [Arcobacter butzleri RM4018] gi|315480200|gb|EFU70867.1| CMP/dCMP deaminase [Arcobacter butzleri JV22] Length = 147 Score = 76.9 bits (189), Expect = 8e-13, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 27/122 (22%) Query: 1 MKKGNVFMSCA--LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-------------R 45 M F++ A + A + VGAV V + +I+S N Sbjct: 1 MLNDRSFINIAKEIALASKCVSKQ---VGAVIVKDGRILSTGYNGTPAGYINCSEHWKGE 57 Query: 46 ELKD-----VTA--HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 KD T HAE+ AI R + +YVTLEPC+ C+ + + I+R+ Sbjct: 58 YTKDHHEWSKTYEIHAEMNAIIWAARKGIS--IEGGTIYVTLEPCSECSKNLIASGIKRI 115 Query: 99 YY 100 Y Sbjct: 116 VY 117 >gi|312869046|ref|ZP_07729223.1| ComE operon protein 2 [Lactobacillus oris PB013-T2-3] gi|311095472|gb|EFQ53739.1| ComE operon protein 2 [Lactobacillus oris PB013-T2-3] Length = 163 Score = 76.9 bits (189), Expect = 8e-13, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 45/119 (37%), Gaps = 22/119 (18%) Query: 1 MKK----GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD------- 49 MKK FM A A + + + VGAV V + +II+ N + D Sbjct: 1 MKKRIDWDQYFMVQAALLASRSTCKR-LSVGAVLVRDKRIIAGGYNGSVSGDDHCIDEGC 59 Query: 50 --------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI R LYVT PC C ++ A I+ + Y Sbjct: 60 YLRDGHCVRTIHAEMNAILQCARFGMSTD--GASLYVTDFPCLQCTKSLLQAGIKEINY 116 >gi|300788900|ref|YP_003769191.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Amycolatopsis mediterranei U32] gi|299798414|gb|ADJ48789.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Amycolatopsis mediterranei U32] Length = 363 Score = 76.9 bits (189), Expect = 8e-13, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 46/129 (35%), Gaps = 15/129 (11%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + A+ A + VGAV + ++++ + D HAE A+ + Sbjct: 226 LKEAIALAAECPPSHTFRVGAVITDADGEVVATGHS---GEGDPGNHAEEAAL---AKCG 279 Query: 67 SQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L +Y +LEPC+ C I A I R+ + P GT+ Sbjct: 280 GDPRLAGATMYSSLEPCSHRSSHPRSCTQLILDAGIPRVVFAWREPPVFVDARGTELLRQ 339 Query: 120 ATCHHSPEI 128 A H E+ Sbjct: 340 AG-RHVVEV 347 >gi|11499353|ref|NP_070592.1| dCMP deaminase, putative [Archaeoglobus fulgidus DSM 4304] gi|2648787|gb|AAB89487.1| dCMP deaminase, putative [Archaeoglobus fulgidus DSM 4304] Length = 157 Score = 76.9 bits (189), Expect = 8e-13, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 52/148 (35%), Gaps = 35/148 (23%) Query: 1 MKK---GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------- 42 MK+ FM A A+ + + VGAV V + +I++ N Sbjct: 1 MKRPTLDEYFMEIASVVAKRSTCLRQH-VGAVIVKDKRILATGYNGAPSGLPHCEEVGCL 59 Query: 43 ---------RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93 +EL HAE AI + + LY T PC CA I A Sbjct: 60 RDRMSVPSGERQELCRGV-HAEQNAIIQAAKFGIS--VDGGTLYSTHCPCITCAKIIINA 116 Query: 94 RIRRLYYGASNPKGGGIENGTQFYTLAT 121 I+R+ YG K +NG + A Sbjct: 117 GIKRVVYG----KEYADKNGLKLLEEAG 140 >gi|269956518|ref|YP_003326307.1| riboflavin biosynthesis protein RibD [Xylanimonas cellulosilytica DSM 15894] gi|269305199|gb|ACZ30749.1| riboflavin biosynthesis protein RibD [Xylanimonas cellulosilytica DSM 15894] Length = 350 Score = 76.9 bits (189), Expect = 8e-13, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 45/141 (31%), Gaps = 19/141 (13%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A P VG V + + +I +R T HAE+ A+ Sbjct: 16 MDRALTLAARGPAHGPNPRVGCVLLAPDGTVIGEGWHR----GAGTPHAEVAALHDAHTR 71 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 VTLEPC CA A+ A I + + +P G G Sbjct: 72 GCDPR--GATAVVTLEPCNHTGRTGPCAQALVDAGITDVVHAIDDP-GARSGGGADHLRA 128 Query: 120 ATCHHSPEIYPGISEQRSRQI 140 H + + + ++ Sbjct: 129 ----HGIRVTSEVRAAAALEL 145 >gi|307326834|ref|ZP_07606026.1| riboflavin biosynthesis protein RibD [Streptomyces violaceusniger Tu 4113] gi|306887597|gb|EFN18591.1| riboflavin biosynthesis protein RibD [Streptomyces violaceusniger Tu 4113] Length = 369 Score = 76.9 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 47/142 (33%), Gaps = 25/142 (17%) Query: 8 MSCALEEAQNAALR---NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+ A N + VG V + +++ ++ HAE+ A+R Sbjct: 10 MRHAVALAARGLGHTSPNPV-VGCVILDAGGRVVGEGWHQRAGG----PHAEVHALRAAG 64 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + VTLEPC C+ A+ A I R++Y +P Sbjct: 65 -----DRARGGTALVTLEPCDHTGRTGPCSQALIAAGIARVHYAVGDPTAQARGGAATLA 119 Query: 118 TLATCHHSPEIYPGISEQRSRQ 139 E+ G+ + + Sbjct: 120 AAG-----VEVEAGLLAEEAEA 136 >gi|168465506|ref|ZP_02699388.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195631795|gb|EDX50315.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 367 Score = 76.9 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 53/155 (34%), Gaps = 21/155 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V N I+ + HAE+ A+R Sbjct: 2 QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A + G+ + + F K R Sbjct: 113 YRLQQAG----IAVSHGLMMSEVEALNKGFLKRMR 143 >gi|281204851|gb|EFA79046.1| hypothetical protein PPL_08516 [Polysphondylium pallidum PN500] Length = 246 Score = 76.9 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 45/122 (36%), Gaps = 16/122 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR 60 + +M AL A L E P GA+ V + N I N +V +H EI A Sbjct: 44 RDECYMRIAL--AFGVTLNRERPYGAIIVNHVSNNISCYGVNSGN--DNVLSHGEIAAFN 99 Query: 61 MGCRILSQE----------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 ++ LY + EPC MCAAA + R+ YG P I Sbjct: 100 NCTKLYPSPTGNDRTNPGINWANHTLYTSAEPCPMCAAASVWRGLGRMVYGTDIPTLARI 159 Query: 111 EN 112 + Sbjct: 160 GS 161 >gi|308272413|emb|CBX29018.1| hypothetical protein N47_P17230 [uncultured Desulfobacterium sp.] Length = 196 Score = 76.9 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 62/167 (37%), Gaps = 27/167 (16%) Query: 1 MKKGNVF-------MSCALEEAQNAALRN-EIPVGAVAVLN--NKIISRAGNRNRELKDV 50 + K F MS ++ +Q R P A + K++S N Sbjct: 20 INKHPAFISSIEDRMSFVIKASQLNVSRGTGGPFAAAIFESESGKLLSLGVNLVTSGGLS 79 Query: 51 TAHAEILAIRMGCRILSQEILPEV-----DLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 HAE+LA + + ++ L +L + EPC MC AI+ + +RR+ GAS+ Sbjct: 80 ILHAEVLAFALAQKKVATYDLGGANLPSHELVSSTEPCAMCLGAIAWSGVRRVITGASDY 139 Query: 106 KGGGIENGTQFYTLATC-HHSPE-------IYPGISEQRSRQIIQDF 144 I F + E + + + + +++ D+ Sbjct: 140 DARIIG----FDEGPKIKNWKTELENRGIAVICDVRREEAAKVLLDY 182 >gi|259503079|ref|ZP_05745981.1| ComE operon protein 2 [Lactobacillus antri DSM 16041] gi|259168945|gb|EEW53440.1| ComE operon protein 2 [Lactobacillus antri DSM 16041] Length = 163 Score = 76.9 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 45/119 (37%), Gaps = 22/119 (18%) Query: 1 MKK----GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD------- 49 MKK FM A A + + + VGAV V + +II+ N + D Sbjct: 1 MKKRIDWDQYFMIQAALLASRSTCKR-LSVGAVLVRDKRIIAGGYNGSVSGDDHCIDEGC 59 Query: 50 --------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI R LYVT PC C ++ A I+ + Y Sbjct: 60 YLRDGHCVRTIHAEMNAILQCARFGISTD--GASLYVTDFPCLQCTKSLLQAGIKEINY 116 >gi|257093103|ref|YP_003166744.1| riboflavin biosynthesis protein RibD [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045627|gb|ACV34815.1| riboflavin biosynthesis protein RibD [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 365 Score = 76.9 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 52/150 (34%), Gaps = 23/150 (15%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + FM+ AL A+ P VG V V + +++ + HAE+ A++ Sbjct: 6 DHDFMARALRLAERGLYTT-TPNPRVGCVIVADGEVVGEGWHVRAGG----RHAEVHALQ 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 YVTLEPC C A+ A + R+ +P +G Sbjct: 61 AAGEKA-----AGATAYVTLEPCSHHGRTPPCVEALLAAGVARVVAAMQDPNPQVAGSG- 114 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 +L E G+ + +I F Sbjct: 115 -LASLQAAGVRAEC--GLLAAEAGEINIGF 141 >gi|154248198|ref|YP_001419156.1| riboflavin biosynthesis protein RibD [Xanthobacter autotrophicus Py2] gi|154162283|gb|ABS69499.1| riboflavin biosynthesis protein RibD [Xanthobacter autotrophicus Py2] Length = 383 Score = 76.9 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 53/150 (35%), Gaps = 25/150 (16%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAVL--NNK--IISRAGNRNRELKDVTAHAE 55 + FM+ AL+ Q+ R VGAV V + + I+ A HAE Sbjct: 15 EDDERFMAEALKVGQSGLGRTWPNPSVGAVVVQHVDGRPHIVGAA--ATAPTGRP--HAE 70 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109 +A+ LYVTLEPC CA A+ A +RR+ +P Sbjct: 71 PIALAQAGEAA-----RGSTLYVTLEPCSHHGRTPPCAGAVIAAGVRRVVAAIEDPDHRV 125 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 G A + G+ +++ Sbjct: 126 KGRGVARLRAAG----IWVTVGVGAEQALA 151 >gi|87301124|ref|ZP_01083965.1| riboflavin biosynthesis protein RibD [Synechococcus sp. WH 5701] gi|87284092|gb|EAQ76045.1| riboflavin biosynthesis protein RibD [Synechococcus sp. WH 5701] Length = 354 Score = 76.9 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 53/151 (35%), Gaps = 22/151 (14%) Query: 8 MSCALEEAQNAALRNEI-P-VGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M AL A A R P VGA V N ++ + HAE+ A+ Sbjct: 1 MERALGLAALAQGRTSPNPLVGALVLDANGLLVGEGFHA--AAGRP--HAEVGALAQAG- 55 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 E L VTLEPC C+ A+ A IRR+ +P G + Sbjct: 56 ----ERARGGTLVVTLEPCCHHGRTPPCSEAVIAAGIRRVIVAMEDPDPRVAGQGIEALR 111 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A E+ G+ + +R + F R Sbjct: 112 QAGA----EVLVGVRQSEARNLNAAFCHRLR 138 >gi|315444248|ref|YP_004077127.1| cytosine/adenosine deaminase [Mycobacterium sp. Spyr1] gi|315262551|gb|ADT99292.1| cytosine/adenosine deaminase [Mycobacterium sp. Spyr1] Length = 159 Score = 76.9 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 2/103 (1%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAIR 60 + +E A+ A + P G++ + + + NR + D T H E + Sbjct: 5 DDDLRHLRRCVELAREAQEAGDEPFGSLLLDADGVTRVEDRNRV-KDGDATRHPEYAIAK 63 Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 LS + +Y + E CTMCAAA + + R+ Y AS Sbjct: 64 WAVENLSPDDRARATVYTSGEHCTMCAAAHAWVGLGRVVYAAS 106 >gi|34558306|ref|NP_908121.1| putative riboflavin-specific deaminase [Wolinella succinogenes DSM 1740] gi|34484025|emb|CAE11021.1| PUTATIVE RIBOFLAVIN-SPECIFIC DEAMINASE EC 3.5.4 [Wolinella succinogenes] Length = 344 Score = 76.9 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 60/172 (34%), Gaps = 40/172 (23%) Query: 4 GNVFMSCALEEAQN--AALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+EA VGA+ + +I+S A ++ + HAE+LA++ Sbjct: 10 HEFYMELALQEAWKYQGLTLPNPAVGALLLGEHGEILSIAAHQRA----GSPHAEVLALQ 65 Query: 61 MG-CRILSQEI---------------------LPEVDLYVTLEPC------TMCAAAISL 92 G R+ LYVTLEPC C+ ++ Sbjct: 66 EGYARLSGNADILALHDSSQIHDYLLAHSQGIFRHCTLYVTLEPCNHYGQTPPCSELLAR 125 Query: 93 ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + + + G +P + ++ GI E+ +++ F Sbjct: 126 LKPKSVIIGKRDPNPKASGGIDRLKEA-----GIAVHTGIKEEACHKLLLPF 172 >gi|302381385|ref|YP_003817208.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Brevundimonas subvibrioides ATCC 15264] gi|302192013|gb|ADK99584.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Brevundimonas subvibrioides ATCC 15264] Length = 209 Score = 76.9 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 52/151 (34%), Gaps = 32/151 (21%) Query: 4 GNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-----HAEI 56 V M A++ A + VG V V + ++S A TA HAE Sbjct: 7 DQVHMRRAIDLALARMGETWPNPAVGCVIVKDGMVLSEA---------ATAPGGRPHAEE 57 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGG 109 A+ + YVTLEPC CA ++ A I R+ A +P Sbjct: 58 QAVPAAG-----PGVAGATAYVTLEPCGARSSGRASCAQFLAEAGISRVVVAALDPSPFA 112 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 GT+ A + G+ + + + Sbjct: 113 SGRGTERLRQAGL----RVETGLMKDEAGVL 139 >gi|160914266|ref|ZP_02076487.1| hypothetical protein EUBDOL_00276 [Eubacterium dolichum DSM 3991] gi|158433893|gb|EDP12182.1| hypothetical protein EUBDOL_00276 [Eubacterium dolichum DSM 3991] Length = 170 Score = 76.9 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 45/119 (37%), Gaps = 31/119 (26%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN-------------RNRE 46 FM A A+ + P VGA V + +K++S N Sbjct: 19 DEYFMGLAHLSAKRSKD----PNTQVGAAIVNDQHKVVSIGYNGFPNGCHDDDFPWEREG 74 Query: 47 LKDVTA-----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI + S L +YV+L PC CA AI + IRR+ Y Sbjct: 75 DFCATKYPYVVHAELNAI-----LNSSTNLQGCSIYVSLFPCNECAKAIIQSGIRRVVY 128 >gi|303289711|ref|XP_003064143.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Micromonas pusilla CCMP1545] gi|226454459|gb|EEH51765.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Micromonas pusilla CCMP1545] Length = 371 Score = 76.5 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 45/125 (36%), Gaps = 33/125 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42 + + FMS A AQ + P VGAV V +K+I N Sbjct: 133 LSWDDYFMSVAFLSAQRSKD----PNKQVGAVIVGADKVISGVGYNGFPRGCSDRSLPWA 188 Query: 43 RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 + D HAE+ AI + + L +YVT+ PC C+ I + I Sbjct: 189 KRSPTDDPMETKYAYVCHAEMNAIMN----KNSQSLNGATMYVTMYPCNECSKLIIQSGI 244 Query: 96 RRLYY 100 + Y Sbjct: 245 TEVVY 249 >gi|315225628|ref|ZP_07867437.1| competence protein ComEB [Capnocytophaga ochracea F0287] gi|314944445|gb|EFS96485.1| competence protein ComEB [Capnocytophaga ochracea F0287] Length = 146 Score = 76.5 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 17/121 (14%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV------------T 51 +M A+E A+ + + + VGA+ V + IIS N D Sbjct: 13 DKAYMRMAMEWAKLSYSQRKQ-VGAIIVKDRMIISDGYNGTPTGFDNCCEDEEGNTHWYV 71 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKGGG 109 HAE AI LY+T+ PC C+ I + I+R+ Y G + +G Sbjct: 72 LHAEANAIMKVASSTQSS--EGATLYITMSPCKECSKLIYQSGIKRVVYKEGYRDNEGLA 129 Query: 110 I 110 Sbjct: 130 F 130 >gi|294494911|ref|YP_003541404.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii DSM 5219] gi|292665910|gb|ADE35759.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii DSM 5219] Length = 156 Score = 76.5 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 49/141 (34%), Gaps = 30/141 (21%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN----------------RNREL 47 F+ A A+ + VGAV V + +I+S N + + Sbjct: 8 DEYFLEIATVIAKRSTCLRNR-VGAVIVRDKQILSTGYNGAPSNMEHCLDIGCIRQKNNI 66 Query: 48 KDVTAH-------AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + T H AE AI L + LY T +PC +C I +RI+R+ Y Sbjct: 67 ESGTRHEKCRAVHAEQNAIIQAA--LHGAGIEGATLYCTHQPCILCTKMIINSRIKRVVY 124 Query: 101 GASNPKGGGIENGTQFYTLAT 121 S P F+ A Sbjct: 125 LTSYPDTDA----LDFFNDAG 141 >gi|154253350|ref|YP_001414174.1| riboflavin biosynthesis protein RibD [Parvibaculum lavamentivorans DS-1] gi|154157300|gb|ABS64517.1| riboflavin biosynthesis protein RibD [Parvibaculum lavamentivorans DS-1] Length = 372 Score = 76.5 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 55/161 (34%), Gaps = 28/161 (17%) Query: 4 GNVFMSCALEEAQNAALR--NEIPVGAVAVLNN----KIISRAGNRNRELKDVTAHAEIL 57 FM AL A+ R VG V V ++ +++ R + HAE Sbjct: 6 DAQFMKMALTLAERGLGRVAPNPAVGCVVVRDDGDGPRVVGRGWTQPGGR----PHAETE 61 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 + + +YV+LEPC+ CA A+ A + R+ ++P Sbjct: 62 -----ALARAGALARGATVYVSLEPCSHHGKTGPCAEALIKAGVARVVGAIADPNPAVAG 116 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 G E+ + + + + FF E+R Sbjct: 117 RGFAALEANG----IEVTENVCAADAHHLNEGFFLTMSEKR 153 >gi|223984558|ref|ZP_03634689.1| hypothetical protein HOLDEFILI_01984 [Holdemania filiformis DSM 12042] gi|223963486|gb|EEF67867.1| hypothetical protein HOLDEFILI_01984 [Holdemania filiformis DSM 12042] Length = 160 Score = 76.5 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 47/136 (34%), Gaps = 33/136 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + FM A A + P VGAV V +K++ N Sbjct: 7 LSWDEYFMGLAHLSAMRSKD----PSTQVGAVIVDQEHKVVGIGYNGLPIGCSDDEFPWD 62 Query: 43 ----RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ AI + S L LYV+L PC CA AI + IR++ Sbjct: 63 REGGMLETKYAFVVHAELNAI-----LNSTRDLHGCTLYVSLFPCNECAKAIIQSGIRKI 117 Query: 99 YYGASNPKGGGIENGT 114 Y + K +N Sbjct: 118 VY--EDDKYAAADNVI 131 >gi|156564196|ref|YP_001429706.1| deoxycytidylate deaminase [Bacillus phage 0305phi8-36] gi|154622893|gb|ABS83773.1| deoxycytidylate deaminase [Bacillus phage 0305phi8-36] Length = 255 Score = 76.5 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 18/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-----------RELKDV-- 50 F+ AL A+ VG V V N++I+ N + +KD Sbjct: 117 DQYFIEQALHVAERGTCSRAR-VGCVLVKENRVIATGYNGSPKGMPHCDDIGHLMKDGHC 175 Query: 51 --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE A+ R+ YVT EPC C ++ A I+R+ Y Sbjct: 176 VRTNHAEENALLQCARLGISS--EGATAYVTHEPCLYCTRQLNQAGIKRIVY 225 >gi|20089036|ref|NP_615111.1| dCMP deaminase [Methanosarcina acetivorans C2A] gi|19913893|gb|AAM03591.1| dCMP deaminase [Methanosarcina acetivorans C2A] Length = 150 Score = 76.5 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 42/127 (33%), Gaps = 26/127 (20%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR--------------NRELKD 49 F+ A A+ A VGAV V + +I+S N K Sbjct: 8 DEYFLEIAFVVAKRATCLRNN-VGAVIVRDKRILSTGYNGAPSGLEHCLDIGCIRELEKI 66 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE AI + +Y T +PC +CA I + I+R+ Y Sbjct: 67 PSGTRHEKCRAVHAEQNAIIQAAIHGVS--ISGATIYCTHQPCILCAKMIINSNIKRVVY 124 Query: 101 GASNPKG 107 P Sbjct: 125 STPYPDT 131 >gi|114562213|ref|YP_749726.1| riboflavin biosynthesis protein RibD [Shewanella frigidimarina NCIMB 400] gi|114333506|gb|ABI70888.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Shewanella frigidimarina NCIMB 400] Length = 381 Score = 76.5 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 18/152 (11%) Query: 4 GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 MS A+ A+ P VG V V NKII ++ HAE+ A++M Sbjct: 8 DTQMMSRAIALAEKGRYTTRPNPCVGCVIVYQNKIIGEGYHQRAGQG----HAEVNALKM 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA + A++ R+ ++ G Sbjct: 64 V--HDNGLSAEGATAYVTLEPCSHYGRTPPCALGLINAKVARVVVAVTDANPEVSGRGIT 121 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G+ +++ + F K Sbjct: 122 LLREAG----VEVDVGLLCEQAYDLNLGFMKR 149 >gi|167914873|ref|ZP_02501964.1| riboflavin biosynthesis protein [Burkholderia pseudomallei 112] Length = 112 Score = 76.5 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 39/110 (35%), Gaps = 17/110 (15%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M+ AL A+ VG V + + +R HAE+ A+R Sbjct: 8 DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALRE 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNP 105 E YVTLEPC CA A+ A + R+ A +P Sbjct: 64 AG-----ERARGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDP 108 >gi|158422887|ref|YP_001524179.1| riboflavin biosynthesis protein [Azorhizobium caulinodans ORS 571] gi|158329776|dbj|BAF87261.1| riboflavin biosynthesis protein [Azorhizobium caulinodans ORS 571] Length = 384 Score = 76.5 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 52/150 (34%), Gaps = 25/150 (16%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNN----KIISRAGNRNRELKDVTAHAE 55 ++ M+ AL Q R VGAV V +I+ RAG HAE Sbjct: 17 EEDEALMAEALAVGQLGLGRTWPNPSVGAVVVRPTSAGPQILGRAGTAPAGR----PHAE 72 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109 LA+ LYVTLEPC CA A+ A I R+ +P Sbjct: 73 PLALAQAGDAA-----RGATLYVTLEPCSHFGRTPPCADAVIAAGITRVVAAVEDPDPRV 127 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 G A + G+ +R+ + Sbjct: 128 RGRGVARMRAAGL----WVTVGVGAERALE 153 >gi|297621291|ref|YP_003709428.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Waddlia chondrophila WSU 86-1044] gi|297376592|gb|ADI38422.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Waddlia chondrophila WSU 86-1044] Length = 339 Score = 76.5 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 56/148 (37%), Gaps = 26/148 (17%) Query: 3 KGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 +M A+ E L + P VG + V N +I+ + + HAE+ A Sbjct: 2 DDRRWMEMAIAEGLKGRL--DAPPNPWVGCILVKNGQIVGLGHH----PECGLPHAEVYA 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112 +R + YVTLEPC C A+ A + R+ G +P + Sbjct: 56 LREAGQ-----NARGATAYVTLEPCVHTGRTLPCIHALIEAGVARVVVGVEDPDPKVSGS 110 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQI 140 G +A ++ G+ E+ + ++ Sbjct: 111 GIAALKIAG----IKVTVGV-EREAVEL 133 >gi|318042152|ref|ZP_07974108.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Synechococcus sp. CB0101] Length = 359 Score = 76.5 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 54/149 (36%), Gaps = 26/149 (17%) Query: 7 FMSCALEEAQNAALRNEI-P---VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M AL+ A A P VG V + +++ ++ T HAE+ A+R Sbjct: 8 WMQRALQLA--ALGNGRTSPNPLVGCVVLDRAGQLVGEGFHQRA----GTPHAEVHALRQ 61 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 E VTLEPC C+ A+ A + R+ +P G Sbjct: 62 AG-----ERARGGTAVVTLEPCCHHGRTPPCSEALLAAGVARVVVAMRDPDPRVAGKGLA 116 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A ++ G+ E +R + + F Sbjct: 117 QLRDAG----VDVLEGVCEAEARILNRGF 141 >gi|159465663|ref|XP_001691042.1| predicted protein [Chlamydomonas reinhardtii] gi|158279728|gb|EDP05488.1| predicted protein [Chlamydomonas reinhardtii] Length = 93 Score = 76.5 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 2/76 (2%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH--HSPEIYPG 131 +LYVT+EPC MCA A+SL R++YYG N + GG + H G Sbjct: 2 CELYVTVEPCIMCAGALSLLGFRQVYYGCGNDRFGGCGSILPVNGEGCVHVGRGFPAQGG 61 Query: 132 ISEQRSRQIIQDFFKE 147 + + + +++++F+ Sbjct: 62 LFPEEAVELLREFYAA 77 >gi|326803497|ref|YP_004321315.1| ComE operon protein 2 [Aerococcus urinae ACS-120-V-Col10a] gi|326650126|gb|AEA00309.1| ComE operon protein 2 [Aerococcus urinae ACS-120-V-Col10a] Length = 170 Score = 76.1 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 21/118 (17%) Query: 1 MKK---GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE----------- 46 MK+ F+S AL + + + + VGAV V +N++I+ N + Sbjct: 1 MKRIPWDQYFLSQALVLSMRS-TCDRLMVGAVIVRDNRVIAGGYNGSVSGETHCSEGGCY 59 Query: 47 LKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L+D T HAE+ AI + ++YVT PC C I A I+++ Y Sbjct: 60 LEDGHCVRTIHAEMNAIIQCAKFGVST--EGAEIYVTHFPCLPCTKQIIQAGIKKVSY 115 >gi|309778050|ref|ZP_07672990.1| probable deoxycytidylate deaminase [Erysipelotrichaceae bacterium 3_1_53] gi|308914187|gb|EFP59987.1| probable deoxycytidylate deaminase [Erysipelotrichaceae bacterium 3_1_53] Length = 164 Score = 76.1 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 52/130 (40%), Gaps = 33/130 (25%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN--------------RNR 45 FM A A+ + P VGAV V + ++++S N R Sbjct: 10 DEYFMGLAHLSAKRSKD----PSTQVGAVIVSDEHRVVSIGYNGFPNGCSDDEFPWDREG 65 Query: 46 ELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E + HAE+ AI + S+ L +YV+L PC CA AI + I R+ Y Sbjct: 66 EFGNTKYPYVVHAELNAI-----LNSKHDLKGCSIYVSLFPCNECAKAIIQSGISRIVY- 119 Query: 102 ASNPKGGGIE 111 + K G E Sbjct: 120 -ESDKYGHTE 128 >gi|149186473|ref|ZP_01864786.1| riboflavin-specific deaminase/reductase [Erythrobacter sp. SD-21] gi|148830062|gb|EDL48500.1| riboflavin-specific deaminase/reductase [Erythrobacter sp. SD-21] Length = 329 Score = 76.1 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 40/113 (35%), Gaps = 18/113 (15%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ A A R VG + V ++I+R RE HAE +A+ Sbjct: 6 SDARWLDAAARLASRGRPLARPNPAVGCLLVNKGRVIARGW--TREGGRP--HAEAVALE 61 Query: 61 MGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPK 106 YVTLEPC C+ + A + R+ GA +P Sbjct: 62 QAGSAA-----RGATAYVTLEPCAHRSTRGPACSDLLVKAGVARVVVGALDPD 109 >gi|86152320|ref|ZP_01070531.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp. jejuni 260.94] gi|315125029|ref|YP_004067033.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85840809|gb|EAQ58060.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp. jejuni 260.94] gi|315018751|gb|ADT66844.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 326 Score = 76.1 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 67/181 (37%), Gaps = 45/181 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55 MK +M+ AL EA P VG V + N KI++ +A K AHAE Sbjct: 1 MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNGKILAIKAH-----EKAGLAHAE 52 Query: 56 ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89 + AI + L EI + +VTLEPC CA Sbjct: 53 LNAITHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 112 Query: 90 ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK-ER 148 S ++++ + G +F E+ I ++ +++++ F K ++ Sbjct: 113 FSELGFKKIFISVKDENKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLKPFLKWQK 167 Query: 149 R 149 R Sbjct: 168 R 168 >gi|260912280|ref|ZP_05918831.1| cytidine/deoxycytidylate deaminase [Prevotella sp. oral taxon 472 str. F0295] gi|260633581|gb|EEX51720.1| cytidine/deoxycytidylate deaminase [Prevotella sp. oral taxon 472 str. F0295] Length = 144 Score = 76.1 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 ++ A A+N+ VGA+ V + IIS N + +VT Sbjct: 11 DLRYLRMARIWAENSYCVRRK-VGALVVKDKMIISDGYNGTPSGFENVCEDDNNVTKPYV 69 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC C+ I + I+R+ YG Sbjct: 70 LHAEANAITKLARSSNNSD--GSTLYVTAAPCIECSKLIIQSGIKRVVYG 117 >gi|261880389|ref|ZP_06006816.1| cytidine/deoxycytidylate deaminase [Prevotella bergensis DSM 17361] gi|270332934|gb|EFA43720.1| cytidine/deoxycytidylate deaminase [Prevotella bergensis DSM 17361] Length = 156 Score = 76.1 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 45/110 (40%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 ++ A A+N+ + VGA+ V N IIS N + D+T Sbjct: 14 DGRYLRMARIWAENSYCKR-RQVGALVVKNKMIISDGYNGTPSGFENVCEDDNDLTKPYV 72 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC CA I A I+R+ YG Sbjct: 73 LHAEANAITKLARSHNNS--EGATLYVTASPCIECAKLIIQAGIKRVVYG 120 >gi|157413823|ref|YP_001484689.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus str. MIT 9215] gi|157388398|gb|ABV51103.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus str. MIT 9215] Length = 364 Score = 76.1 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 22/151 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 +M A+ A P VGAV + N K+IS + K HAE +A Sbjct: 7 SHKKWMKRAIFLASLGKNTTSPNPRVGAVILDKNGKLISEGFH----FKAGMPHAEAMAF 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + +YV LEPC C + + I+R Y +P G Sbjct: 63 NNLKK-----DARGGAIYVNLEPCCHHGRTPPCVDKVISSGIKRAYISIEDPDVRVAGKG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A +++ G+ ++ S + + F Sbjct: 118 IKKLEEAG----IQVHLGLCKKESLDLNKAF 144 >gi|6572106|emb|CAB63090.1| riboflavin-specific deaminase / reductase [Bartonella henselae str. Houston-1] Length = 363 Score = 76.1 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 48/140 (34%), Gaps = 26/140 (18%) Query: 11 ALEEAQN-AALRNEIP-VGAVAVLNNK-----IISRAGNRNRELKDVTAHAEILAIRMGC 63 A+ A+ L E P VG + N++ I+ HAE+ A++M Sbjct: 2 AIRLAERHVGLTGENPSVGTIIARNDENVGVYIVGYG----VTAIQGRPHAEVQALQMAG 57 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + YVTLEPC+ C + + I R+ ++ G Sbjct: 58 SLAH-----GATAYVTLEPCSHYGKTSPCVNTLLKSGISRVVIALTDLDKRVNGRGIALL 112 Query: 118 TLATCHHSPEIYPGISEQRS 137 A E+ G+ + + Sbjct: 113 RAAG----IEVIEGVLAKEA 128 >gi|281200522|gb|EFA74740.1| hypothetical protein PPL_11771 [Polysphondylium pallidum PN500] Length = 237 Score = 76.1 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 11/111 (9%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 NN ++ N ++ +H EI+AI + + + + LY T EPC MCA+A+ Sbjct: 91 NNNLMCSGVNT--GKPNMISHGEIVAINNCSALYNTTVFTNMTLYTTGEPCAMCASALLW 148 Query: 93 ARIRRLYYGASNPKGGGIENGTQFYTLATC---------HHSPEIYPGISE 134 A + + YG +N + + ++ + +P + G+ + Sbjct: 149 ADFKTVVYGTANKRLYCQTCMSNIPIDSSYIMGRYYGLRNRAPRLIGGVLQ 199 >gi|118617420|ref|YP_905752.1| bifunctional riboflavin biosynthesis protein RibG [Mycobacterium ulcerans Agy99] gi|118569530|gb|ABL04281.1| bifunctional riboflavin biosynthesis protein RibG [Mycobacterium ulcerans Agy99] Length = 339 Score = 76.1 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 24/152 (15%) Query: 8 MSCALEEA--QNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A+E++ PVGAV V ++ G + D HAE++A+R Sbjct: 13 MRLAIEQSMLVKGTTYPNPPVGAVIVDQEGWVVGIGGTQP-SGGD---HAEVVALRKAGG 68 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + + VT+EPC C A+ AR+ + YG ++P G G + Sbjct: 69 LAAGA-----IAVVTMEPCNHFGKTPPCVNALIEARVGTVIYGVADPN-GIAGGGAGRLS 122 Query: 119 LATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149 A ++ G+ + ++++ ++R Sbjct: 123 AAGL----QVRSGVLADHVAAGPLREWLHKQR 150 >gi|83319549|ref|YP_424377.1| deoxycytidylate deaminase [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283435|gb|ABC01367.1| probable deoxycytidylate deaminase [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 153 Score = 76.1 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 40/128 (31%), Positives = 53/128 (41%), Gaps = 33/128 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN---RNRELKDVT-- 51 M + FM A A + P VGA+ V +I++ N R D Sbjct: 1 MSWQHYFMLIAKASAMRSKD----PNTQVGAIVVNELQQIVATGYNGFPRGVSDDDFPWS 56 Query: 52 --------------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 AHAE+ AI + S+ L DLYVTL PC CA I A I+R Sbjct: 57 KTNEDWLENKYAYVAHAELNAI-----VSSRSDLSNCDLYVTLFPCNECAKIIIQAGIKR 111 Query: 98 LYYGASNP 105 +YY A++P Sbjct: 112 IYY-ANDP 118 >gi|315923999|ref|ZP_07920227.1| deoxycytidylate deaminase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622839|gb|EFV02792.1| deoxycytidylate deaminase [Pseudoramibacter alactolyticus ATCC 23263] Length = 165 Score = 76.1 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 40/119 (33%), Gaps = 24/119 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRN-----------RELK 48 + FM AL AQ + VGA V NKI+S N Sbjct: 13 LSWDQYFMGIALLSAQRSKDPG-TQVGACIVSPENKILSMGYNGMPIGCSDDEMPWAREG 71 Query: 49 DVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D HAE AI L LYVTL PC C AI I+++ Y Sbjct: 72 DPLDTKYLYVCHAEFNAILNSGAKT----LQGATLYVTLFPCNECTKAIIQCGIKKVVY 126 >gi|302408545|ref|XP_003002107.1| FCY1p [Verticillium albo-atrum VaMs.102] gi|261359028|gb|EEY21456.1| FCY1p [Verticillium albo-atrum VaMs.102] Length = 239 Score = 76.1 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 36/97 (37%), Gaps = 18/97 (18%) Query: 25 PVGAVAVLN-----NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI--------- 70 P G V V + I+ N + + + H E+ AI IL+ Sbjct: 70 PFGTVIVNHTVSGRGGIVCTGENTSHQSGNPIMHGEMAAIANCSHILTDPTGPYNMTVAE 129 Query: 71 ----LPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 ++ +Y E C MCA+AI A R YG S Sbjct: 130 ALAAFSDLTIYTNAESCPMCASAIRWAGFREYVYGTS 166 >gi|270157224|ref|ZP_06185881.1| riboflavin biosynthesis protein RibD [Legionella longbeachae D-4968] gi|289164378|ref|YP_003454516.1| Riboflavin biosynthesis protein RibD [Legionella longbeachae NSW150] gi|269989249|gb|EEZ95503.1| riboflavin biosynthesis protein RibD [Legionella longbeachae D-4968] gi|288857551|emb|CBJ11389.1| Riboflavin biosynthesis protein RibD [Legionella longbeachae NSW150] Length = 357 Score = 76.1 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 17/111 (15%) Query: 4 GNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ ALE+A+ P VGAVAV N II++A +R T HAE L + Sbjct: 2 HKKFLLAALEQARLGQGHCAPNPCVGAVAVQNGTIIAQAHHR----GAGTPHAEQLLLTQ 57 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106 P + LY++LEPC C AI + + +G +P Sbjct: 58 -----IPPKTPGICLYISLEPCNHWGRTPPCVDAIINHGVEEVVFGYLDPN 103 >gi|283953762|ref|ZP_06371293.1| riboflavin biosynthesis protein RibD, putative [Campylobacter jejuni subsp. jejuni 414] gi|283794803|gb|EFC33541.1| riboflavin biosynthesis protein RibD, putative [Campylobacter jejuni subsp. jejuni 414] Length = 326 Score = 76.1 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 64/177 (36%), Gaps = 44/177 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55 MK +M+ AL EA P VG V + N KI++ +A K AHAE Sbjct: 1 MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNGKILAIKAH-----EKAGFAHAE 52 Query: 56 ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89 + I + L+ EI + +VTLEPC CA Sbjct: 53 LNTIAHAFKNLNPEISLPKEANAMHKFICKNHRGIFKDSIAFVTLEPCSHQGKTPPCAKL 112 Query: 90 ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 S ++++ + G F E+ GI E+ +++++ F K Sbjct: 113 FSDLGFKKVFISVKDENKVASG-GADFLKKQG----IEVEFGILEEEGKKLLKPFLK 164 >gi|213401731|ref|XP_002171638.1| tRNA-specific adenosine deaminase subunit tad3 [Schizosaccharomyces japonicus yFS275] gi|211999685|gb|EEB05345.1| tRNA-specific adenosine deaminase subunit tad3 [Schizosaccharomyces japonicus yFS275] Length = 307 Score = 76.1 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 18/135 (13%) Query: 8 MSCALEEAQNAALRNEIPVGAVA----VLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M L A+ +P + N+ I+S + + + HA I I Sbjct: 155 MDEVLRLARQQESSGNVP--CAIAIYDLDNDTILSLQADDRKNSGNPLHHAAIQGINNVA 212 Query: 64 RILSQEILPEV------------DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 + + + ++ EPC MC+ A+ +RI RL Y + P G ++ Sbjct: 213 VKERERRMLDHDPKEERYLCTNLTAVMSHEPCVMCSMALLHSRIHRLIYCSPQPSTGAMQ 272 Query: 112 NGTQFYTLATCHHSP 126 + + +H Sbjct: 273 SSYGIHWRTELNHRY 287 >gi|254392899|ref|ZP_05008067.1| riboflavin biosynthesis protein RibD [Streptomyces clavuligerus ATCC 27064] gi|197706554|gb|EDY52366.1| riboflavin biosynthesis protein RibD [Streptomyces clavuligerus ATCC 27064] Length = 379 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 44/142 (30%), Gaps = 25/142 (17%) Query: 8 MSCALEEAQNAA---LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+E A N + VG V + +I + HAE+ A+R Sbjct: 1 MRRAIELAARGLGSTSPNPV-VGCVITDASGEIAGTGYHERAGG----PHAEVHALRAAG 55 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 YVTLEPC C+ A+ A I R+ + ++P Sbjct: 56 -----TRARGGTAYVTLEPCDHTGRTGPCSQALLAAGITRVVHAVADPNPQASGGAGTLR 110 Query: 118 TLATCHHSPEIYPGISEQRSRQ 139 + G+ + Sbjct: 111 AA-----GVRVECGLLGPEAEA 127 >gi|239939894|ref|ZP_04691831.1| putative riboflavin/cytosine deaminase [Streptomyces roseosporus NRRL 15998] gi|239986380|ref|ZP_04707044.1| putative riboflavin/cytosine deaminase [Streptomyces roseosporus NRRL 11379] gi|291443327|ref|ZP_06582717.1| riboflavin biosynthesis protein RibD [Streptomyces roseosporus NRRL 15998] gi|291346274|gb|EFE73178.1| riboflavin biosynthesis protein RibD [Streptomyces roseosporus NRRL 15998] Length = 366 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 42/136 (30%), Gaps = 25/136 (18%) Query: 8 MSCALEEAQNAA---LRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+ A N + VG V + ++ HAE+ A+R Sbjct: 10 MRRAITLAARGLGSTSPNPV-VGCVITDAAGAVAGEGFHQRAGG----PHAEVHALRAA- 63 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + YVTLEPC C A+ A I R+ Y +P G Sbjct: 64 ----DDRARGGTAYVTLEPCNHTGRTGPCVQALLAAGISRVVYAVGDPNPQATGGGDTLR 119 Query: 118 TLATCHHSPEIYPGIS 133 ++ G+ Sbjct: 120 AA-----GVQVEQGLL 130 >gi|288928373|ref|ZP_06422220.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp. oral taxon 317 str. F0108] gi|288331207|gb|EFC69791.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp. oral taxon 317 str. F0108] Length = 146 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 ++ A A+N+ VGA+ V + IIS N + +VT Sbjct: 11 DLRYLRMARIWAENSYCVRRK-VGALVVKDKMIISDGYNGTPSGFENVCEDDNNVTKPYV 69 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC C+ I + I+R+ YG Sbjct: 70 LHAEANAITKLARSSNNSD--GSTLYVTAAPCIECSKLIIQSGIKRVVYG 117 >gi|320011955|gb|ADW06805.1| riboflavin biosynthesis protein RibD [Streptomyces flavogriseus ATCC 33331] Length = 366 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 47/142 (33%), Gaps = 25/142 (17%) Query: 8 MSCALEEAQN---AALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+ A A N + VG V + ++ HAE+ A+R Sbjct: 10 MRRAITLAARGLGATSPNPV-VGCVILDAAGDPAGEGFHQRAGG----PHAEVHALRAAG 64 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 E VTLEPC CA A+ A +RR+ Y S+P G Sbjct: 65 -----ERARGGTAIVTLEPCNHTGRTGPCAQALIEAGVRRVVYAVSDPNPQATG-GADTL 118 Query: 118 TLATCHHSPEIYPGISEQRSRQ 139 A E+ G+ + Sbjct: 119 RGAGL----EVAQGLLADEAEA 136 >gi|238063934|ref|ZP_04608643.1| riboflavin biosynthesis protein ribD [Micromonospora sp. ATCC 39149] gi|237885745|gb|EEP74573.1| riboflavin biosynthesis protein ribD [Micromonospora sp. ATCC 39149] Length = 353 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 44/142 (30%), Gaps = 25/142 (17%) Query: 8 MSCALEEAQNAALR---NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+ A N + VG V + + +++ + HAEI+A+ Sbjct: 10 MRRAIALATRGLGTTSPNPV-VGCVLLDADGEVVGEGFHAYAGG----PHAEIVALAQAG 64 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 R VTLEPC C+ A+ A + R+ +P Sbjct: 65 R-----RARGGTAVVTLEPCDHTGRPGPCSHALIAAGVARVVIAVPDPNPVASGGAATLR 119 Query: 118 TLATCHHSPEIYPGISEQRSRQ 139 ++ G+ + Sbjct: 120 AG-----GLDVEVGVRAAEAEA 136 >gi|307721944|ref|YP_003893084.1| CMP/dCMP deaminase zinc-binding protein [Sulfurimonas autotrophica DSM 16294] gi|306980037|gb|ADN10072.1| CMP/dCMP deaminase zinc-binding protein [Sulfurimonas autotrophica DSM 16294] Length = 145 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 47/123 (38%), Gaps = 27/123 (21%) Query: 1 MKKGNVFMSCA--LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-------------- 44 M F++ A + A + VGAV V + +I+S N Sbjct: 1 MLDDKNFINIASEIASASKCVSKQ---VGAVIVKDGRILSTGYNGTPAGYTNCCDHWNDE 57 Query: 45 ----RELKDVTA--HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 T HAE+ AI R + + +YVTLEPC+ C+ + + I+R+ Sbjct: 58 YTKEHHEWSKTYEIHAEMNAIIWAARKGIS--IEDATIYVTLEPCSECSKNLIASGIKRI 115 Query: 99 YYG 101 Y Sbjct: 116 VYA 118 >gi|182439882|ref|YP_001827601.1| putative riboflavin/cytosine deaminase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178468398|dbj|BAG22918.1| putative riboflavin/cytosine deaminase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 366 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 44/142 (30%), Gaps = 25/142 (17%) Query: 8 MSCALEEAQNAA---LRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+ A N + VG V + ++ HAE+ A+ Sbjct: 10 MRRAISLAARGLGSTSPNPV-VGCVITDAAGAVAGEGFHQRAGG----PHAEVHAL---- 60 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + YVTLEPC C+ A+ A I R+ Y ++P G G Sbjct: 61 -RAAGGRARGGTAYVTLEPCDHTGRTGPCSQALLAAGISRVVYAVADPNPGAAGGGDTL- 118 Query: 118 TLATCHHSPEIYPGISEQRSRQ 139 H G+ + Sbjct: 119 ----RHAGVRAEGGLLADEAEA 136 >gi|260466843|ref|ZP_05813027.1| riboflavin biosynthesis protein RibD [Mesorhizobium opportunistum WSM2075] gi|259029345|gb|EEW30637.1| riboflavin biosynthesis protein RibD [Mesorhizobium opportunistum WSM2075] Length = 376 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 53/150 (35%), Gaps = 25/150 (16%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNK----IISRAGNRNRELKDVTAHAEIL 57 + FM+ AL ++ A R P VG + V ++ I+ HAE Sbjct: 15 DHRFMAAALRLSRRNAGRTSTNPSVGTLIVRDDGAGPMIVGTGVTAVGGR----PHAETE 70 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ + YVTLEPC CA A+ A + R+ +S+P Sbjct: 71 ALAEAGELA-----RGATAYVTLEPCAHHGRTPPCANALVNAGVARVVGASSDPDPRVSG 125 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQII 141 G A E+ + ++ + + Sbjct: 126 KGYAILRAAG----IEVVEKVLAAQAAEQM 151 >gi|228476125|ref|ZP_04060833.1| ComE operon protein 2 [Staphylococcus hominis SK119] gi|314936291|ref|ZP_07843638.1| ComE operon protein 2 [Staphylococcus hominis subsp. hominis C80] gi|228269948|gb|EEK11428.1| ComE operon protein 2 [Staphylococcus hominis SK119] gi|313654910|gb|EFS18655.1| ComE operon protein 2 [Staphylococcus hominis subsp. hominis C80] Length = 154 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 +K FM+ + A + + + VGA V +N+II+ N + Sbjct: 4 IKWDEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDVGCLIED 62 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ + +YVT PC C +I A I+++YY Sbjct: 63 DHCIRTIHAEMNALLQCAKQGVSSD--NATIYVTHFPCLNCTKSIIQAGIKKIYYA 116 >gi|322694880|gb|EFY86699.1| nucleoside deaminase [Metarhizium acridum CQMa 102] Length = 252 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 55/171 (32%), Gaps = 43/171 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-----NKIISRAGNRNRELKDVTA 52 ++ + +M A A N P G V V + +++ N + T Sbjct: 37 IETRHYWMRRA-NAALFEVTGNPCPTQAFGTVIVNHTAGGLGELVCIGANDV-ASGNPTL 94 Query: 53 HAEILAIRMGCRILSQEI-------------LPEVDLYVTLEPCTMCAAAISLARIRRLY 99 H E AI IL+ ++ LY EPC MCA+AI + + L Sbjct: 95 HGETAAITNCSAILTDPNGPYKLSGHEALKAWADLTLYTNAEPCPMCASAIRWSGFKELV 154 Query: 100 YGASNPKGGGIENG----TQFYTLATCH----------HSPEIYPGISEQR 136 +G GI++ + TL I G+ E Sbjct: 155 FGT------GIKSLRAYNWKMMTLPAKDLFKYTTELPTGRTTIAGGVLENE 199 >gi|154482616|ref|ZP_02025064.1| hypothetical protein EUBVEN_00283 [Eubacterium ventriosum ATCC 27560] gi|149736516|gb|EDM52402.1| hypothetical protein EUBVEN_00283 [Eubacterium ventriosum ATCC 27560] Length = 163 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 51/136 (37%), Gaps = 33/136 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNR------------N 44 + FM A A + P VGA V +NKI+S N N Sbjct: 10 ISWDEYFMGVASLAALRSKD----PNTQVGACIVSDDNKILSMGYNGLPVGCSDDEFPWN 65 Query: 45 RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 RE D T H+E+ AI L +YVTL PC CA AI I++ Sbjct: 66 RESDDPYDNKYFYTTHSELNAILN----YRGGSLEGAKIYVTLFPCNECAKAIIQCGIKK 121 Query: 98 LYYGASNPKGGGIENG 113 + YG + K G + Sbjct: 122 VIYG--DDKYGDTSSV 135 >gi|168704914|ref|ZP_02737191.1| riboflavin biosynthesis protein RibD [Gemmata obscuriglobus UQM 2246] Length = 355 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 49/142 (34%), Gaps = 22/142 (15%) Query: 8 MSCALEEAQNAALRNEI-P-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M AL A E P VGAV + K + ++ HAE+ A++ Sbjct: 1 MRHALALAARGRGAVEPNPMVGAVVLDPTGKPVGEGWHQKFGG----PHAEVFALQAAGA 56 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 L VTLEPC C A+ A + R+ ++P G Sbjct: 57 -----RARGGTLLVTLEPCCHHGKTPPCTDAVLRAGVARVVAAMADPFPRVAGGGLALLR 111 Query: 119 LATCHHSPEIYPGISEQRSRQI 140 A ++ G+ E +R + Sbjct: 112 AAG----VDVQVGLCEADARAL 129 >gi|187479427|ref|YP_787452.1| riboflavin biosynthesis protein [includes diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Bordetella avium 197N] gi|115424014|emb|CAJ50567.1| riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Bordetella avium 197N] Length = 371 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 52/146 (35%), Gaps = 20/146 (13%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M AL A+ P VG V V + +I+ + HAE++A+R Sbjct: 1 MQRALGLAREVLYTT-TPNPRVGCVIVRDGQILGEGATQPPGGG----HAEVMALRAA-- 53 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + L +YVTLEPC C A+ A R+ +P G Sbjct: 54 RAAGHDLAGATVYVTLEPCSHFGRTPPCVDALVAAAPARVVVALGDPNPRVSGQGFARLR 113 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144 A E+ G+ E+ + + F Sbjct: 114 AAG----VEVSSGVCEEEALALNPGF 135 >gi|94498080|ref|ZP_01304643.1| riboflavin biosynthesis protein RibD [Sphingomonas sp. SKA58] gi|94422515|gb|EAT07553.1| riboflavin biosynthesis protein RibD [Sphingomonas sp. SKA58] Length = 317 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 46/136 (33%), Gaps = 24/136 (17%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M+ A+ ++ P VG + V + +++ R K HAE A+ Sbjct: 1 MAAAIALSRRGRGL-STPNPNVGCLIVRDGRVVGRGW----TQKGGRPHAEAQALDQAM- 54 Query: 65 ILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 E + YVTLEPC CA ++ A + R+ +P G + Sbjct: 55 ----EQARDATAYVTLEPCFHLSPRGPRCADLLARAGVARVVIALRDPDPRTNGQGAAWL 110 Query: 118 TLATCHHSPEIYPGIS 133 + G+ Sbjct: 111 RDRG----VAVEMGLL 122 >gi|294811515|ref|ZP_06770158.1| putative riboflavin/cytosine deaminase [Streptomyces clavuligerus ATCC 27064] gi|294324114|gb|EFG05757.1| putative riboflavin/cytosine deaminase [Streptomyces clavuligerus ATCC 27064] Length = 449 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 44/142 (30%), Gaps = 25/142 (17%) Query: 8 MSCALEEAQNAA---LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+E A N + VG V + +I + HAE+ A+R Sbjct: 71 MRRAIELAARGLGSTSPNPV-VGCVITDASGEIAGTGYHERAGG----PHAEVHALRAAG 125 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 YVTLEPC C+ A+ A I R+ + ++P Sbjct: 126 -----TRARGGTAYVTLEPCDHTGRTGPCSQALLAAGITRVVHAVADPNPQASGGAGTLR 180 Query: 118 TLATCHHSPEIYPGISEQRSRQ 139 + G+ + Sbjct: 181 AA-----GVRVECGLLGPEAEA 197 >gi|288800764|ref|ZP_06406221.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp. oral taxon 299 str. F0039] gi|288332225|gb|EFC70706.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp. oral taxon 299 str. F0039] Length = 143 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 ++ A A+N+ VGA+ V + IIS N + +T Sbjct: 12 DIRYLRMARIWAENSYCERRK-VGAIVVKDKMIISDGYNGTPEGFENVCEDSNQITKPYV 70 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC C+ I + I+R+ YG Sbjct: 71 LHAEANAITKLARSSNNS--EGATLYVTASPCIECSKLIIQSGIKRVVYG 118 >gi|161509817|ref|YP_001575476.1| competence protein ComEB [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253732242|ref|ZP_04866407.1| competence protein ComEB [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733160|ref|ZP_04867325.1| competence protein ComEB [Staphylococcus aureus subsp. aureus TCH130] gi|294848619|ref|ZP_06789365.1| ComE operon protein 2 [Staphylococcus aureus A9754] gi|295406712|ref|ZP_06816517.1| ComE operon protein 2 [Staphylococcus aureus A8819] gi|297207692|ref|ZP_06924127.1| competence protein ComEB [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245706|ref|ZP_06929571.1| ComE operon protein 2 [Staphylococcus aureus A8796] gi|300911773|ref|ZP_07129216.1| competence protein ComEB [Staphylococcus aureus subsp. aureus TCH70] gi|304380821|ref|ZP_07363481.1| ComE operon protein ComEB [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|160368626|gb|ABX29597.1| possible competence protein ComEB [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724031|gb|EES92760.1| competence protein ComEB [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728916|gb|EES97645.1| competence protein ComEB [Staphylococcus aureus subsp. aureus TCH130] gi|294824645|gb|EFG41068.1| ComE operon protein 2 [Staphylococcus aureus A9754] gi|294968459|gb|EFG44483.1| ComE operon protein 2 [Staphylococcus aureus A8819] gi|296887709|gb|EFH26607.1| competence protein ComEB [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177357|gb|EFH36609.1| ComE operon protein 2 [Staphylococcus aureus A8796] gi|300886019|gb|EFK81221.1| competence protein ComEB [Staphylococcus aureus subsp. aureus TCH70] gi|304340548|gb|EFM06482.1| ComE operon protein ComEB [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|320140525|gb|EFW32379.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus MRSA131] gi|320144063|gb|EFW35832.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus MRSA177] Length = 156 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 +K FM+ + A + + + VGA V +N+II+ N + Sbjct: 7 IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 65 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ + +YVT PC C +I A I+R+YY Sbjct: 66 GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKRIYYA 119 >gi|57505260|ref|ZP_00371189.1| riboflavin biosynthesis protein (ribG) [Campylobacter upsaliensis RM3195] gi|57016396|gb|EAL53181.1| riboflavin biosynthesis protein (ribG) [Campylobacter upsaliensis RM3195] Length = 327 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 67/177 (37%), Gaps = 44/177 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55 MK +M+ AL+EA P VG V + NN+I+S +A K AHAE Sbjct: 1 MK--EFYMNLALKEAWK-YQFLTYPNPAVGCVILDKNNQILSIKAH-----EKQGEAHAE 52 Query: 56 ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89 + AI+ ++L E L +VTLEPC CA Sbjct: 53 LNAIKEALKVLKPEFNFPKEPNVLHEFILTNHQKLLQNATAFVTLEPCVHQGKTPPCAKL 112 Query: 90 ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 S ++++ + G +F + GI E+ R++++ F K Sbjct: 113 FSTLEFKKVFVSVKDENQIASG-GAEFLRQKGIL----VEMGILEKEGRELLKPFLK 164 >gi|268611449|ref|ZP_06145176.1| putative Cytidine/deoxycytidylate deaminase, zinc-binding region (CMP/dCMP deaminase, zinc-binding) protein [Ruminococcus flavefaciens FD-1] Length = 210 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 60/145 (41%), Gaps = 17/145 (11%) Query: 14 EAQNAALRNEIPVGAVAV-LNNKIISRAGNR-NRELKDV-TAHAEILAIRMGCRILSQEI 70 EA +A +P GAV +++ + N + T+H+ I AI + + E Sbjct: 15 EAWDAMKSGSVPSGAVIYDREGNLLAESHNGFKNTDVNPYTSHSCINAINQLS-LRNVES 73 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130 + +Y ++EPC MC AI+++ I+ ++ + + G + L + S Sbjct: 74 NSGLTIYSSMEPCFMCLGAIAISNIKEIHSASRDLFYGAAHHLYDDAALIAKNISF---- 129 Query: 131 GISEQRSRQI------IQDFFKERR 149 S I +Q +F+ +R Sbjct: 130 ---HSESGDIEFFQIVLQSYFEVKR 151 >gi|191638477|ref|YP_001987643.1| ComE operon protein 2 [Lactobacillus casei BL23] gi|227535031|ref|ZP_03965080.1| competence protein ComEB [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631434|ref|ZP_04674465.1| ComE operon protein 2 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066532|ref|YP_003788555.1| comE operon protein 2 [Lactobacillus casei str. Zhang] gi|190712779|emb|CAQ66785.1| ComE operon protein 2 [Lactobacillus casei BL23] gi|227187346|gb|EEI67413.1| competence protein ComEB [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239525899|gb|EEQ64900.1| ComE operon protein 2 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438939|gb|ADK18705.1| ComE operon protein 2 [Lactobacillus casei str. Zhang] gi|327382511|gb|AEA53987.1| Transcriptional regulator, TetR family protein [Lactobacillus casei LC2W] gi|327385708|gb|AEA57182.1| Transcriptional regulator, TetR family protein [Lactobacillus casei BD-II] Length = 153 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 40/114 (35%), Gaps = 20/114 (17%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV------------- 50 F+ A + ++ + VGAV V ++II+ N D Sbjct: 18 DQYFLELAEKVSERSTCERAT-VGAVLVQEHRIIATGYNGAIS-GDPHCDEAGHLMRDGH 75 Query: 51 ---TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ AI +YV PC C A+ A I+R+ Y Sbjct: 76 CIRTIHAEMNAIIQCAANGVSTH--GATVYVNFFPCLNCTKALIQAGIKRVVYA 127 >gi|239978360|ref|ZP_04700884.1| putative riboflavin/cytosine deaminase [Streptomyces albus J1074] gi|291450256|ref|ZP_06589646.1| riboflavin biosynthesis protein RibD [Streptomyces albus J1074] gi|291353205|gb|EFE80107.1| riboflavin biosynthesis protein RibD [Streptomyces albus J1074] Length = 378 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 46/142 (32%), Gaps = 25/142 (17%) Query: 8 MSCALEEAQNAALR---NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M ALE A N + VG V + + + +R HAEI A+R Sbjct: 14 MRRALELAARGLGTTSPNPV-VGCVVLDAHGEQAGEGWHRRAGG----PHAEIHALREAG 68 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + VTLEPC CA A+ A I R+ Y ++P Sbjct: 69 -----DRARGGTALVTLEPCNHTGRTGPCAQALLDAGISRVVYAVADPDPLAEGGAATLR 123 Query: 118 TLATCHHSPEIYPGISEQRSRQ 139 E G+ + Q Sbjct: 124 AAGA-----ETSQGLLAAEAEQ 140 >gi|225419861|ref|ZP_03762164.1| hypothetical protein CLOSTASPAR_06202 [Clostridium asparagiforme DSM 15981] gi|225041485|gb|EEG51731.1| hypothetical protein CLOSTASPAR_06202 [Clostridium asparagiforme DSM 15981] Length = 195 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 47/126 (37%), Gaps = 33/126 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + FM A+ + + P VGA V +NKI+S N Sbjct: 40 ITWDEYFMGVAILAGKRSKD----PSTQVGACIVSPDNKILSMGYNGFPKGCSDDEFPWE 95 Query: 43 RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 R E D + H+E+ AI L LYVTL PC CA AI A I Sbjct: 96 RENEADDPYNAKYFYSTHSELNAILN----YRGGSLEGSKLYVTLFPCNECAKAIIQAGI 151 Query: 96 RRLYYG 101 + + YG Sbjct: 152 KTIVYG 157 >gi|49474161|ref|YP_032203.1| riboflavin biosynthesis protein ribD [Bartonella quintana str. Toulouse] gi|49239665|emb|CAF26036.1| Riboflavin biosynthesis protein ribD [Bartonella quintana str. Toulouse] Length = 365 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 48/143 (33%), Gaps = 26/143 (18%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNK-----IISRAGNRNRELKDVTAHAEILAIR 60 M+ A+ A+ L E P VG + N+ I+ HAE+ A+ Sbjct: 1 MAAAIRLAERHIGLTGENPSVGTIIARNDDSRGRCIVGYG----VTAIHGRPHAEVQALH 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M + YVTLEPC C A+ + I R+ ++ G Sbjct: 57 MAG-----PLARGATAYVTLEPCSHYGKTLPCVNALINSGISRVVVALTDLDKRVDGRGI 111 Query: 115 QFYTLATCHHSPEIYPGISEQRS 137 A E+ G+ + + Sbjct: 112 ALLRAAG----IEVVEGVLAEEA 130 >gi|269103261|ref|ZP_06155958.1| tRNA-specific adenosine-34 deaminase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163159|gb|EEZ41655.1| tRNA-specific adenosine-34 deaminase [Photobacterium damselae subsp. damselae CIP 102761] Length = 71 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%) Query: 95 IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + ++ YGA + K G + + A +H + G+ E R +Q FFK RR Sbjct: 1 MGKVVYGAPDLKTGAAGSTMNLLSYAGVNHHVQFDAGLLEDECRAQLQAFFKRRR 55 >gi|145346176|ref|XP_001417569.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577796|gb|ABO95862.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 147 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 40/151 (26%), Positives = 53/151 (35%), Gaps = 24/151 (15%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 M ALE A A P VG V V + ++ + HAE+ A+R Sbjct: 1 MRRALEVAATATTAETFPNPRVGCVVVDAREDVVVGEGYHPKAGE----PHAEVFALRAA 56 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + YVTLEPC CA A+ A + R+ G +P G Q Sbjct: 57 GELA-----RGATAYVTLEPCNHYGRTPPCARALVDAGVARVVVGFIDPDPRVSGGGIQT 111 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A E+ G E R+I DF Sbjct: 112 LLDAG----IEVAVGCEEALCREINADFIAR 138 >gi|229552285|ref|ZP_04441010.1| competence protein ComEB [Lactobacillus rhamnosus LMS2-1] gi|229314357|gb|EEN80330.1| competence protein ComEB [Lactobacillus rhamnosus LMS2-1] Length = 170 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 20/114 (17%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV------------- 50 + F+ A + ++ + VGAV V ++II+ N D Sbjct: 34 DHYFLELAKKVSERSTCERAT-VGAVLVQEHRIIATGYNGAIS-GDPHCDEAGHLMRDGH 91 Query: 51 ---TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ AI +YV PC C A+ A I+R+ Y Sbjct: 92 CIRTIHAEMNAIIQCAANGVSTH--GATVYVNFFPCLNCTKALIQAGIKRVVYA 143 >gi|312139593|ref|YP_004006929.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribg [Rhodococcus equi 103S] gi|311888932|emb|CBH48245.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibG [Rhodococcus equi 103S] Length = 336 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 56/159 (35%), Gaps = 24/159 (15%) Query: 1 MKKGNVFMSCALE--EAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEIL 57 M + M A++ EA + PVGAV + + ++ R HAE++ Sbjct: 1 MTSLDAAMRLAIDASEAARGSTSPNPPVGAVILDASGAVVGVG--ATRPPGGP--HAEVV 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 A+ E VTLEPC C+ A+ A I ++Y ++P Sbjct: 57 ALAAAG-----ERARGGTAVVTLEPCNHQGRTGPCSRALIDAGIAAVHYSVADPNPAAAG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQ-IIQDFFKERR 149 E+ G+ + + ++ + +R Sbjct: 112 GADTLRAA-----RIEVTGGLLADDAERGPLRAWLHRQR 145 >gi|283470867|emb|CAQ50078.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus ST398] Length = 153 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 +K FM+ + A + + + VGA V +N+II+ N + Sbjct: 4 IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ + + +YVT PC C +I A I+R+YY Sbjct: 63 GHCIRTIHAEMNALLQCAKQGVST--EDATIYVTHFPCLNCTKSIIQAGIKRIYYA 116 >gi|319763925|ref|YP_004127862.1| riboflavin biosynthesis protein ribd [Alicycliphilus denitrificans BC] gi|317118486|gb|ADV00975.1| riboflavin biosynthesis protein RibD [Alicycliphilus denitrificans BC] Length = 370 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 40/156 (25%), Positives = 58/156 (37%), Gaps = 19/156 (12%) Query: 1 MKKGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEIL 57 M F++ AL A A L N P VG V ++ + + HAE++ Sbjct: 1 MTDAAPFITQALGLAAQALFLSNPNPRVGCVIASGAGAVLGQGFTQQAGG----PHAEVV 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 A+R + YVTLEPC C A+ A I R+ +P Sbjct: 57 ALRDAAASGNDVR--GATAYVTLEPCAHQGRTGPCCDALIQAGIGRVVASIEDPNPLVGG 114 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G F L ++ PG Q+SR++ FF Sbjct: 115 QG--FARLRAAGIDVQVGPG--AQQSRELNIGFFSR 146 >gi|299141063|ref|ZP_07034201.1| cytidine/deoxycytidylate deaminase family protein [Prevotella oris C735] gi|298578029|gb|EFI49897.1| cytidine/deoxycytidylate deaminase family protein [Prevotella oris C735] Length = 150 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 42/110 (38%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 N ++ A A+N+ VGA+ V + IIS N + T Sbjct: 11 DNRYLRMARIWAENSYCLR-RQVGALVVKDKMIISDGYNGTPSGFDNVCEDANQATFPYV 69 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC CA I A IRR+ Y Sbjct: 70 LHAEANAITKLARSSNNSD--GSTLYVTASPCIECAKLIIQAGIRRVVYA 117 >gi|71019211|ref|XP_759836.1| hypothetical protein UM03689.1 [Ustilago maydis 521] gi|46099634|gb|EAK84867.1| hypothetical protein UM03689.1 [Ustilago maydis 521] Length = 260 Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 33/130 (25%), Positives = 50/130 (38%), Gaps = 18/130 (13%) Query: 25 PVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP---------E 73 P G V +N++I NR D T H EI AI+ +L ++ L Sbjct: 65 PFGTAIVNTTSNELICAIANRVGSTGDPTQHGEITAIQHCTNVLQRKGLSPQEILAAWKH 124 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYG------ASNPKGG-GIENGTQFYTLATCHHSP 126 LY EPCTMC +AI A + + YG A N + I + + H+ Sbjct: 125 FSLYTNAEPCTMCLSAIRWAGFKEVIYGTSVRTIAENGRNQIYIPSNLVLEKSYSFGHAT 184 Query: 127 EIYPGISEQR 136 + + + Sbjct: 185 LMLGNVLTEE 194 >gi|326780548|ref|ZP_08239813.1| riboflavin biosynthesis protein RibD [Streptomyces cf. griseus XylebKG-1] gi|326660881|gb|EGE45727.1| riboflavin biosynthesis protein RibD [Streptomyces cf. griseus XylebKG-1] Length = 366 Score = 75.3 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 44/142 (30%), Gaps = 25/142 (17%) Query: 8 MSCALEEAQNAA---LRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+ A N + VG V + ++ HAE+ A+ Sbjct: 10 MRRAITLAARGLGSTSPNPV-VGCVITDAAGAVAGEGFHQRAGG----PHAEVHAL---- 60 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + YVTLEPC C+ A+ A I R+ Y ++P G G Sbjct: 61 -RAAGGRARGGTAYVTLEPCDHTGRTGPCSQALLAAGISRVVYAVADPNPGAAGGGDTL- 118 Query: 118 TLATCHHSPEIYPGISEQRSRQ 139 H G+ + Sbjct: 119 ----RHAGVRAEGGLLADEAEA 136 >gi|282877407|ref|ZP_06286230.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella buccalis ATCC 35310] gi|281300459|gb|EFA92805.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella buccalis ATCC 35310] Length = 146 Score = 75.3 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 42/110 (38%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVTA--- 52 ++ A A+N+ VGA+ V N IIS N + VT Sbjct: 10 DQRYLRMARIWAENSYCHR-RQVGALVVKGNMIISDGYNGTPSGFDNVCEDENGVTHPYV 68 Query: 53 -HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC CA I A I+R+ Y Sbjct: 69 LHAEANAITKLARSSNNSD--GSTLYVTASPCIECAKLIIQAGIKRVVYA 116 >gi|15924579|ref|NP_372113.1| late competence operon required for DNA binding and uptake [Staphylococcus aureus subsp. aureus Mu50] gi|15927169|ref|NP_374702.1| late competence operon required for DNA binding and uptake comEB [Staphylococcus aureus subsp. aureus N315] gi|21283269|ref|NP_646357.1| late competence operon required for DNA binding and uptake comEB [Staphylococcus aureus subsp. aureus MW2] gi|49486423|ref|YP_043644.1| putative deaminase [Staphylococcus aureus subsp. aureus MSSA476] gi|82751191|ref|YP_416932.1| late competence deaminase protein [Staphylococcus aureus RF122] gi|151221703|ref|YP_001332525.1| competence protein ComEB required for DNA binding and uptake [Staphylococcus aureus subsp. aureus str. Newman] gi|156979907|ref|YP_001442166.1| late competence operon required for DNA binding and uptake [Staphylococcus aureus subsp. aureus Mu3] gi|255006374|ref|ZP_05144975.2| competence protein ComEB [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793665|ref|ZP_05642644.1| ComE operon protein 2 [Staphylococcus aureus A9781] gi|258411036|ref|ZP_05681316.1| competence protein ComEB [Staphylococcus aureus A9763] gi|258420161|ref|ZP_05683116.1| ComE operon protein 2 [Staphylococcus aureus A9719] gi|258424016|ref|ZP_05686898.1| ComE operon protein 2 [Staphylococcus aureus A9635] gi|258437420|ref|ZP_05689404.1| competence protein ComEB [Staphylococcus aureus A9299] gi|258443626|ref|ZP_05691965.1| competence protein ComEB [Staphylococcus aureus A8115] gi|258446834|ref|ZP_05694988.1| competence protein ComEB [Staphylococcus aureus A6300] gi|258448748|ref|ZP_05696860.1| competence protein ComEB [Staphylococcus aureus A6224] gi|258450583|ref|ZP_05698645.1| late competence operon required for DNA binding and uptake [Staphylococcus aureus A5948] gi|258453565|ref|ZP_05701543.1| late competence operon required for DNA binding and uptake [Staphylococcus aureus A5937] gi|262048588|ref|ZP_06021471.1| late competence operon required for DNA binding and uptake comEB [Staphylococcus aureus D30] gi|262051247|ref|ZP_06023471.1| late competence operon required for DNA binding and uptake comEB [Staphylococcus aureus 930918-3] gi|282893090|ref|ZP_06301324.1| ComE operon protein 2 [Staphylococcus aureus A8117] gi|282916859|ref|ZP_06324617.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus D139] gi|282920137|ref|ZP_06327862.1| ComE operon protein 2 [Staphylococcus aureus A9765] gi|282928222|ref|ZP_06335827.1| ComE operon protein 2 [Staphylococcus aureus A10102] gi|283770664|ref|ZP_06343556.1| dCMP deaminase [Staphylococcus aureus subsp. aureus H19] gi|296276607|ref|ZP_06859114.1| competence protein ComEB [Staphylococcus aureus subsp. aureus MR1] gi|13701387|dbj|BAB42681.1| late competence operon required for DNA binding and uptake comEB [Staphylococcus aureus subsp. aureus N315] gi|14247360|dbj|BAB57751.1| late competence operon required for DNA binding and uptake [Staphylococcus aureus subsp. aureus Mu50] gi|21204709|dbj|BAB95405.1| late competence operon required for DNA binding and uptake comEB [Staphylococcus aureus subsp. aureus MW2] gi|49244866|emb|CAG43327.1| putative deaminase [Staphylococcus aureus subsp. aureus MSSA476] gi|82656722|emb|CAI81150.1| late competence deaminase protein [Staphylococcus aureus RF122] gi|150374503|dbj|BAF67763.1| competence protein ComEB required for DNA binding and uptake [Staphylococcus aureus subsp. aureus str. Newman] gi|156722042|dbj|BAF78459.1| late competence operon required for DNA binding and uptake [Staphylococcus aureus subsp. aureus Mu3] gi|257787637|gb|EEV25977.1| ComE operon protein 2 [Staphylococcus aureus A9781] gi|257840186|gb|EEV64650.1| competence protein ComEB [Staphylococcus aureus A9763] gi|257843872|gb|EEV68266.1| ComE operon protein 2 [Staphylococcus aureus A9719] gi|257845637|gb|EEV69669.1| ComE operon protein 2 [Staphylococcus aureus A9635] gi|257848625|gb|EEV72613.1| competence protein ComEB [Staphylococcus aureus A9299] gi|257851032|gb|EEV74975.1| competence protein ComEB [Staphylococcus aureus A8115] gi|257854409|gb|EEV77358.1| competence protein ComEB [Staphylococcus aureus A6300] gi|257858026|gb|EEV80915.1| competence protein ComEB [Staphylococcus aureus A6224] gi|257861741|gb|EEV84540.1| late competence operon required for DNA binding and uptake [Staphylococcus aureus A5948] gi|257864296|gb|EEV87046.1| late competence operon required for DNA binding and uptake [Staphylococcus aureus A5937] gi|259160884|gb|EEW45904.1| late competence operon required for DNA binding and uptake comEB [Staphylococcus aureus 930918-3] gi|259163235|gb|EEW47794.1| late competence operon required for DNA binding and uptake comEB [Staphylococcus aureus D30] gi|269941078|emb|CBI49462.1| putative deaminase [Staphylococcus aureus subsp. aureus TW20] gi|282319346|gb|EFB49698.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus D139] gi|282590029|gb|EFB95111.1| ComE operon protein 2 [Staphylococcus aureus A10102] gi|282594485|gb|EFB99470.1| ComE operon protein 2 [Staphylococcus aureus A9765] gi|282764408|gb|EFC04534.1| ComE operon protein 2 [Staphylococcus aureus A8117] gi|283460811|gb|EFC07901.1| dCMP deaminase [Staphylococcus aureus subsp. aureus H19] gi|285817271|gb|ADC37758.1| dCMP deaminase; Late competence protein ComEB [Staphylococcus aureus 04-02981] gi|298694870|gb|ADI98092.1| dCMP deaminase [Staphylococcus aureus subsp. aureus ED133] gi|302751418|gb|ADL65595.1| late competence operon required for DNA binding and uptake comEB [Staphylococcus aureus subsp. aureus str. JKD6008] gi|312829976|emb|CBX34818.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus ECT-R 2] gi|323438554|gb|EGA96301.1| late competence deaminase protein [Staphylococcus aureus O11] gi|323442793|gb|EGB00418.1| late competence deaminase protein [Staphylococcus aureus O46] gi|329314264|gb|AEB88677.1| Possible competence protein ComEB [Staphylococcus aureus subsp. aureus T0131] gi|329727571|gb|EGG64027.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21172] gi|329728343|gb|EGG64780.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21189] gi|329733117|gb|EGG69454.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21193] Length = 153 Score = 75.3 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 +K FM+ + A + + + VGA V +N+II+ N + Sbjct: 4 IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ + +YVT PC C +I A I+R+YY Sbjct: 63 GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKRIYYA 116 >gi|294672973|ref|YP_003573589.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein [Prevotella ruminicola 23] gi|294474140|gb|ADE83529.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Prevotella ruminicola 23] Length = 145 Score = 75.3 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 15/112 (13%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT-- 51 K ++ A A+N+ + VGA+ V + IIS N + +VT Sbjct: 10 KLDVRYLRMARIWAENSYCKR-RQVGALVVKDKMIISDGYNGTPSGFENVCEDDDNVTKP 68 Query: 52 --AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + +Y+T PC CA I A I+R+ YG Sbjct: 69 YVLHAEANAITKLARSNNNSD--GATIYITASPCIECAKLIIQAGIKRVVYG 118 >gi|326440097|ref|ZP_08214831.1| putative riboflavin/cytosine deaminase [Streptomyces clavuligerus ATCC 27064] Length = 388 Score = 75.3 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 44/142 (30%), Gaps = 25/142 (17%) Query: 8 MSCALEEAQNAA---LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+E A N + VG V + +I + HAE+ A+R Sbjct: 10 MRRAIELAARGLGSTSPNPV-VGCVITDASGEIAGTGYHERAGG----PHAEVHALRAAG 64 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 YVTLEPC C+ A+ A I R+ + ++P Sbjct: 65 -----TRARGGTAYVTLEPCDHTGRTGPCSQALLAAGITRVVHAVADPNPQASGGAGTLR 119 Query: 118 TLATCHHSPEIYPGISEQRSRQ 139 + G+ + Sbjct: 120 AA-----GVRVECGLLGPEAEA 136 >gi|53712256|ref|YP_098248.1| deoxycytidylate deaminase [Bacteroides fragilis YCH46] gi|60680433|ref|YP_210577.1| putative deoxycytidylate deaminase [Bacteroides fragilis NCTC 9343] gi|253563708|ref|ZP_04841165.1| deoxycytidylate deaminase [Bacteroides sp. 3_2_5] gi|265762444|ref|ZP_06091012.1| ComE operon protein 2 [Bacteroides sp. 2_1_16] gi|52215121|dbj|BAD47714.1| deoxycytidylate deaminase [Bacteroides fragilis YCH46] gi|60491867|emb|CAH06625.1| putative deoxycytidylate deaminase [Bacteroides fragilis NCTC 9343] gi|251947484|gb|EES87766.1| deoxycytidylate deaminase [Bacteroides sp. 3_2_5] gi|263255052|gb|EEZ26398.1| ComE operon protein 2 [Bacteroides sp. 2_1_16] gi|301161966|emb|CBW21510.1| putative deoxycytidylate deaminase [Bacteroides fragilis 638R] Length = 145 Score = 75.3 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Query: 26 VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N + +VT HAE AI R + Sbjct: 33 VGALIVKDKMIISDGYNGTPSGFENVCEDDNNVTKPYVLHAEANAITKIARSNNSSD--G 90 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 +YVT PC CA I A I+R+ Y Sbjct: 91 ATMYVTASPCIECAKLIIQAGIKRVVY 117 >gi|123968996|ref|YP_001009854.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus str. AS9601] gi|123199106|gb|ABM70747.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus str. AS9601] Length = 364 Score = 75.3 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 53/151 (35%), Gaps = 22/151 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 +M A+ A P VGAV + N K+I+ + + HAE +A Sbjct: 7 SHIKWMKRAIFLASLGKNTTSPNPRVGAVIIDKNGKLIAEGFH--YKAGMP--HAEAMAF 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + +YV LEPC C + + I++ Y +P G Sbjct: 63 NNLKK-----DPKGGSIYVNLEPCCHQGRTPPCVDKVISSGIKKAYISIEDPDARVAGKG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A +++ G+ ++ S + F Sbjct: 118 IKLLEEAG----IQVHLGLCKKESLDLNNAF 144 >gi|67624625|ref|XP_668595.1| hypothetical protein [Cryptosporidium hominis TU502] gi|54659781|gb|EAL38344.1| hypothetical protein Chro.70174 [Cryptosporidium hominis] Length = 344 Score = 75.3 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 26/181 (14%), Positives = 59/181 (32%), Gaps = 57/181 (31%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ A + + A P G V L KI++ + H+ + AI + Sbjct: 160 DKFVKLACKVGEFALSIGNPPRGCVITLKGKIVAIGEDNRNSDY-PWMHSVMKAIDNFSK 218 Query: 65 ILS---------------------------------------------QEILPEVDL--- 76 + +IL + +L Sbjct: 219 RVCSSSSSMPKMTNSLDSKIQDENQGSKNNEDHKDHLIEIQSKYSISEDQILSDSELKDQ 278 Query: 77 --------YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 Y++ EPC C+ A+ +RI +++Y + + G + + + + ++ +H + Sbjct: 279 YLCTNGIAYLSHEPCISCSMALVHSRISKVFYMYKDKERGFLGSNHKLHCVSELNHHYRV 338 Query: 129 Y 129 + Sbjct: 339 F 339 >gi|269856949|gb|ACZ51498.1| FCY1p [Cryptococcus heveanensis] Length = 231 Score = 75.3 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 21/151 (13%) Query: 6 VFMSCALEEAQNAALRN--EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A EA A + P G+ V ++++I N+ + H EI AI Sbjct: 42 HWMRVA-NEAVYADGHPCPQAPFGSAIVNTTSDELICVTSNKVGVTGNPAMHGEISAITH 100 Query: 62 GCRILSQEILP---------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE- 111 +L+++ L + LY EPC MCA+AI A + + YG S K Sbjct: 101 CTDVLTKKGLSPQEILASWKDFSLYTNGEPCPMCASAIRWAGFKEVIYGTSIRKIAEHGR 160 Query: 112 ------NGTQFYTLATCHHSPEIYPGISEQR 136 + + + H+ + I Sbjct: 161 NQIYIPSSLVWEKSYSLGHATLMLGNILNNE 191 >gi|189500555|ref|YP_001960025.1| CMP/dCMP deaminase zinc-binding [Chlorobium phaeobacteroides BS1] gi|189495996|gb|ACE04544.1| CMP/dCMP deaminase zinc-binding [Chlorobium phaeobacteroides BS1] Length = 174 Score = 75.3 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 44/121 (36%), Gaps = 27/121 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 FMS A ++ A +GAV V +N I+S N R K Sbjct: 29 HEYFMSVAHLISRRATCTRGH-IGAVLVRDNNILSTGYNGAPSGLPHCNETTCRIYSSKH 87 Query: 50 V----------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 T HAEI AI + + + D+Y+T PC C + I+ +Y Sbjct: 88 PDGTVEENCVNTIHAEINAIAQAAKHGVS--IKDADIYITASPCIHCLKVLINVGIKTIY 145 Query: 100 Y 100 Y Sbjct: 146 Y 146 >gi|295428166|ref|ZP_06820798.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590868|ref|ZP_06949506.1| competence protein ComEB [Staphylococcus aureus subsp. aureus MN8] gi|295128524|gb|EFG58158.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575754|gb|EFH94470.1| competence protein ComEB [Staphylococcus aureus subsp. aureus MN8] gi|312437943|gb|ADQ77014.1| ComE operon protein ComEB [Staphylococcus aureus subsp. aureus TCH60] Length = 156 Score = 75.3 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 +K FM+ + A + + + VGA V +N+II+ N + Sbjct: 7 IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 65 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ + +YVT PC C +I A I+R+YY Sbjct: 66 GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKRIYYA 119 >gi|330823811|ref|YP_004387114.1| riboflavin biosynthesis protein RibD [Alicycliphilus denitrificans K601] gi|329309183|gb|AEB83598.1| riboflavin biosynthesis protein RibD [Alicycliphilus denitrificans K601] Length = 370 Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 40/156 (25%), Positives = 58/156 (37%), Gaps = 19/156 (12%) Query: 1 MKKGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEIL 57 M F++ AL A A L N P VG V ++ + + HAE++ Sbjct: 1 MTDAAPFITQALGLAAQALFLSNPNPRVGCVIASGAGAVLGQGFTQQAGG----PHAEVV 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 A+R + YVTLEPC C A+ A I R+ +P Sbjct: 57 ALRDAAASGNDVR--GATAYVTLEPCAHQGRTGPCCDALIQAGIGRVVASIEDPNPLVGG 114 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G F L ++ PG Q+SR++ FF Sbjct: 115 QG--FARLRAAGIDVQVGPG--AQQSRELNIGFFSR 146 >gi|300781124|ref|ZP_07090978.1| riboflavin biosynthesis protein RibD [Corynebacterium genitalium ATCC 33030] gi|300532831|gb|EFK53892.1| riboflavin biosynthesis protein RibD [Corynebacterium genitalium ATCC 33030] Length = 361 Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 50/150 (33%), Gaps = 30/150 (20%) Query: 9 SCALEEAQNAAL--RN----EIPVGAVAVL-------NN------KIISRAGNRNRELKD 49 AL EA +A R PVG V ++ +II+ G Sbjct: 13 ETALWEALDAGAEVRGTTSPNPPVGCVIYREVEPVIVDDWDQAEPEIIATGGTEPAGG-- 70 Query: 50 VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGAS 103 HAEI+A+ + + L + VTLEPC CA AI A I ++ Y Sbjct: 71 --RHAEIVALDAAREKVGDDGLRGACMLVTLEPCNHTGRTGPCAEAIVAAGIAKVVYIEP 128 Query: 104 NPKGGGIENGTQFYTLA-TCHHSPEIYPGI 132 +P HH G+ Sbjct: 129 DPNPEASGGAEYLRRHGVEVHHKTYDVTGL 158 >gi|159037490|ref|YP_001536743.1| riboflavin biosynthesis protein RibD [Salinispora arenicola CNS-205] gi|157916325|gb|ABV97752.1| riboflavin biosynthesis protein RibD [Salinispora arenicola CNS-205] Length = 353 Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 43/142 (30%), Gaps = 25/142 (17%) Query: 8 MSCALEEAQNAALR---NEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+E A N + VG V + +++ + HAEI+A+ Sbjct: 10 MRRAVELAARGLGTTSPNPV-VGCVLLDPGGRVVGEGFHAYAGG----PHAEIVALAQAG 64 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 E VTLEPC C+ A+ A I R+ +P Sbjct: 65 -----ERARGGTAVVTLEPCDHTGRTGPCSTALVQAGIARVVIAVPDPNRAASGGAATLR 119 Query: 118 TLATCHHSPEIYPGISEQRSRQ 139 + G+ + Sbjct: 120 AA-----GIRVDLGVRAAEAEA 136 >gi|167846242|ref|ZP_02471750.1| putative deaminase [Burkholderia pseudomallei B7210] Length = 71 Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 23/50 (46%) Query: 100 YGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 +GA +PK G + + A +H + G+ +++ FF +RR Sbjct: 2 FGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVLKSFFAQRR 51 >gi|281424156|ref|ZP_06255069.1| cytidine/deoxycytidylate deaminase family protein [Prevotella oris F0302] gi|281401717|gb|EFB32548.1| cytidine/deoxycytidylate deaminase family protein [Prevotella oris F0302] Length = 159 Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 42/110 (38%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 N ++ A A+N+ VGA+ V + IIS N + T Sbjct: 20 DNRYLRMARIWAENSYCLR-RQVGALVVKDKMIISDGYNGTPSGFDNVCEDANQATFPYV 78 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC CA I A IRR+ Y Sbjct: 79 LHAEANAITKLARSSNNSD--GSTLYVTASPCIECAKLIIQAGIRRVVYA 126 >gi|70726327|ref|YP_253241.1| late competence operon required for DNA binding and uptake [Staphylococcus haemolyticus JCSC1435] gi|68447051|dbj|BAE04635.1| late competence operon required for DNA binding and uptake [Staphylococcus haemolyticus JCSC1435] Length = 152 Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 +K FM+ + A + + + VGA V +N+II+ N + Sbjct: 4 LKWDEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ + +YVT PC C +I A I+++YY Sbjct: 63 GHCIRTIHAEMNALLQCAKQGVSTD--GATIYVTHFPCLNCTKSIIQAGIKQIYYA 116 >gi|285019507|ref|YP_003377218.1| hypothetical protein XALc_2747 [Xanthomonas albilineans GPE PC73] gi|283474725|emb|CBA17224.1| conserved hypothetical protein [Xanthomonas albilineans] Length = 186 Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 53/146 (36%), Gaps = 11/146 (7%) Query: 10 CALEEAQNAALRN-EIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A+E ++ P GA V +++IIS NR AHAE +A + + L Sbjct: 33 LAVELSRLNLEAGSGGPFGAAVFGPDHRIISVGVNRVVPQTTSLAHAENMAYMLAQQRLQ 92 Query: 68 QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122 L V L + +PC C A A I RL GAS + + A Sbjct: 93 SPRLNAVLSPVTLATSSQPCCQCYGATIWAGIDRLLIGASAEDVMALTTFDEGPLPADWV 152 Query: 123 ----HHSPEIYPGISEQRSRQIIQDF 144 E+ + + +++ + Sbjct: 153 GELERRGIEVVRNLHRDAACAVLRRY 178 >gi|262341266|ref|YP_003284121.1| dCMP deaminase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272603|gb|ACY40511.1| dCMP deaminase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 155 Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 46/110 (41%), Gaps = 15/110 (13%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT--- 51 +M A+E+++ + + + VGAV V N+IIS NR E VT Sbjct: 10 DDIAYMKLAIEQSKLSFCKKKK-VGAVIVQKNQIISCGYNRTPSGFDNICEEKNGVTKWY 68 Query: 52 -AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI S +YVT PC C I + IRR+ Y Sbjct: 69 VIHAEENAILK--LSSSSLSCKGASIYVTHFPCQECCKLIYQSTIRRVIY 116 >gi|315639223|ref|ZP_07894385.1| riboflavin biosynthesis protein RibD [Campylobacter upsaliensis JV21] gi|315480549|gb|EFU71191.1| riboflavin biosynthesis protein RibD [Campylobacter upsaliensis JV21] Length = 327 Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 67/177 (37%), Gaps = 44/177 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55 MK +MS AL+EA P VG V + NN+I+S +A K AHAE Sbjct: 1 MK--EFYMSLALKEAWK-YQFLTYPNPAVGCVILDKNNQILSIKAH-----EKQGEAHAE 52 Query: 56 ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89 + AI+ ++L E L +VTLEPC CA Sbjct: 53 LNAIKEALKLLKPEFNFPKEPNALHEFILTNHQKLLQNATAFVTLEPCAHQGKTPPCAKL 112 Query: 90 ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 S ++++ + G +F + GI E+ R++++ F K Sbjct: 113 FSTLEFKKVFVSVKDENQIASG-GAEFLRQNGIL----VEMGILEKEGRELLKPFLK 164 >gi|298373394|ref|ZP_06983383.1| cytidine/deoxycytidylate deaminase family protein [Bacteroidetes oral taxon 274 str. F0058] gi|298274446|gb|EFI15998.1| cytidine/deoxycytidylate deaminase family protein [Bacteroidetes oral taxon 274 str. F0058] Length = 141 Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 43/110 (39%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 +M A A+N+ VGA+ V + IIS N + + + Sbjct: 11 DERYMRMARIWAENSYCLRRK-VGALLVKDKMIISDGYNGTPSGFENCCEDEHNNSKPYV 69 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC CA I A IRR+ YG Sbjct: 70 LHAEANAISKVARSNNSSD--GATLYVTASPCMECAKLIIQAGIRRVVYG 117 >gi|49483836|ref|YP_041060.1| deaminase [Staphylococcus aureus subsp. aureus MRSA252] gi|257425713|ref|ZP_05602137.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 55/2053] gi|257428374|ref|ZP_05604772.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 65-1322] gi|257431011|ref|ZP_05607391.1| competence protein ComEB [Staphylococcus aureus subsp. aureus 68-397] gi|257433699|ref|ZP_05610057.1| competence protein ComEB [Staphylococcus aureus subsp. aureus E1410] gi|257436613|ref|ZP_05612657.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M876] gi|282904170|ref|ZP_06312058.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus C160] gi|282905997|ref|ZP_06313852.1| competence protein ComEB [Staphylococcus aureus subsp. aureus Btn1260] gi|282908908|ref|ZP_06316726.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911226|ref|ZP_06319028.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus WBG10049] gi|282914395|ref|ZP_06322181.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M899] gi|282919364|ref|ZP_06327099.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus C427] gi|282924689|ref|ZP_06332357.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus C101] gi|283958352|ref|ZP_06375803.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus A017934/97] gi|293503469|ref|ZP_06667316.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 58-424] gi|293510486|ref|ZP_06669192.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M809] gi|293531026|ref|ZP_06671708.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M1015] gi|49241965|emb|CAG40660.1| putative deaminase [Staphylococcus aureus subsp. aureus MRSA252] gi|257271407|gb|EEV03553.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 55/2053] gi|257275215|gb|EEV06702.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 65-1322] gi|257278441|gb|EEV09077.1| competence protein ComEB [Staphylococcus aureus subsp. aureus 68-397] gi|257281792|gb|EEV11929.1| competence protein ComEB [Staphylococcus aureus subsp. aureus E1410] gi|257283964|gb|EEV14087.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M876] gi|282313524|gb|EFB43919.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus C101] gi|282317174|gb|EFB47548.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus C427] gi|282321576|gb|EFB51901.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M899] gi|282324921|gb|EFB55231.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus WBG10049] gi|282327172|gb|EFB57467.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331289|gb|EFB60803.1| competence protein ComEB [Staphylococcus aureus subsp. aureus Btn1260] gi|282595788|gb|EFC00752.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus C160] gi|283790501|gb|EFC29318.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus A017934/97] gi|290920294|gb|EFD97360.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M1015] gi|291095135|gb|EFE25400.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 58-424] gi|291466850|gb|EFF09370.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M809] gi|315195491|gb|EFU25878.1| putative deaminase [Staphylococcus aureus subsp. aureus CGS00] Length = 153 Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 +K FM+ + A + + + VGA V +N+II+ N + Sbjct: 4 IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ + +YVT PC C +I A I+R+YY Sbjct: 63 GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKRIYYA 116 >gi|332527289|ref|ZP_08403353.1| 5-amino-6-(5-phosphoribosylamino) uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Rubrivivax benzoatilyticus JA2] gi|332111705|gb|EGJ11686.1| 5-amino-6-(5-phosphoribosylamino) uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Rubrivivax benzoatilyticus JA2] Length = 370 Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 21/149 (14%) Query: 10 CALEEAQNA-ALRNEIP-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 AL A+ + L + P VG V + +++ R + AHAE++A+R Sbjct: 13 EALALAEGSIGLTDPNPRVGCVIGHDDGRVLGRGATQRAGQ----AHAEVMALRDAAAAG 68 Query: 67 SQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +VTLEPC C A+ A I R+ +P G A Sbjct: 69 HDTR--GATAWVTLEPCAHHGRTPPCCDALVAAGIARVVVAVGDPFPQVAGAGITRLRAA 126 Query: 121 TCHHSPEIYPGIS--EQRSRQIIQDFFKE 147 ++ G +R++ FF Sbjct: 127 G----VQVELGDEDIAAAARELNIGFFSR 151 >gi|258648600|ref|ZP_05736069.1| cytidine/deoxycytidylate deaminase family protein [Prevotella tannerae ATCC 51259] gi|260851385|gb|EEX71254.1| cytidine/deoxycytidylate deaminase family protein [Prevotella tannerae ATCC 51259] Length = 145 Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------RNRELKDVT---- 51 N ++ A ++N+ + VGA+ V + IIS N + + ++T Sbjct: 11 DNRYLRMARIWSENSYCKR-RQVGALIVKDKMIISDGYNGTPSGFENQCEDELNITKPYV 69 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC C+ I A I+R+ YG Sbjct: 70 LHAEANAITKIARSGNNSD--GATLYVTDAPCIECSKLIIQAGIKRVIYG 117 >gi|21221143|ref|NP_626922.1| riboflavin-specific deaminase [Streptomyces coelicolor A3(2)] gi|289771571|ref|ZP_06530949.1| riboflavin biosynthesis protein RibD [Streptomyces lividans TK24] gi|8052397|emb|CAB92254.1| riboflavin-specific deaminase [Streptomyces coelicolor A3(2)] gi|289701770|gb|EFD69199.1| riboflavin biosynthesis protein RibD [Streptomyces lividans TK24] Length = 381 Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 43/120 (35%), Gaps = 18/120 (15%) Query: 8 MSCALEEA-QNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M ALE A P VG V + ++ +R T HAE+ A+R Sbjct: 1 MRRALELAGAEVGSTGSNPAVGCVLLDAEGTTVATGVHR----GPGTPHAEVDALRRA-- 54 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + VTLEPC C+ A+ A +RR+ Y ++P + Sbjct: 55 ---RGRHRGTTAVVTLEPCDHQGRTGPCSKALIEAGVRRVLYAVADPNRVAAGGARRLAD 111 >gi|326331206|ref|ZP_08197500.1| riboflavin biosynthesis protein RibD [Nocardioidaceae bacterium Broad-1] gi|325950976|gb|EGD43022.1| riboflavin biosynthesis protein RibD [Nocardioidaceae bacterium Broad-1] Length = 352 Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 21/124 (16%) Query: 26 VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 VG V + + +I+ +R T HAE+ A+ VTLEPC Sbjct: 34 VGCVLLGADGSMIAEGYHR----GPGTPHAEVDALAKAGEAA-----RGATAVVTLEPCN 84 Query: 85 M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 C+ A+ A + R+ Y S+P E+ G+ +R Sbjct: 85 HTGRTGPCSQALIEAGVARVVYAQSDPNPVAAGGAATLKQA-----GVEVEQGLYAAEAR 139 Query: 139 QIIQ 142 ++ + Sbjct: 140 ELNR 143 >gi|331212549|ref|XP_003307544.1| tRNA-specific adenosine deaminase subunit TAD2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309297947|gb|EFP74538.1| tRNA-specific adenosine deaminase subunit TAD2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 298 Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 4/75 (5%) Query: 15 AQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE--I 70 A A + NEIPVG V V +K++S+ NR E K+ HAE AI + + Sbjct: 159 ANEALVANEIPVGCVLVSKTTDKVLSKGRNRTNETKNACLHAEFDAIGGLHSVTPADKID 218 Query: 71 LPEVDLYVTLEPCTM 85 +V LYVT+EPC M Sbjct: 219 WNDVKLYVTVEPCLM 233 >gi|332880028|ref|ZP_08447712.1| cytidine and deoxycytidylate deaminase zinc-binding region [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682024|gb|EGJ54937.1| cytidine and deoxycytidylate deaminase zinc-binding region [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 146 Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 46/118 (38%), Gaps = 17/118 (14%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD------------VT 51 +M A+E A+ + + + VGA+ V + IIS N D Sbjct: 13 DKAYMRMAMEWAKLSYSQRKQ-VGAIMVKDRMIISDGYNGTPTGFDNCCEDEEGNTHWFV 71 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKG 107 HAE AI LY+T+ PC C+ I + I+R+ Y G + +G Sbjct: 72 LHAEANAIMKVAASTQSS--QGATLYITMSPCKECSKLIYQSGIKRVVYKEGYRDNEG 127 >gi|299822872|ref|ZP_07054758.1| deoxycytidylate deaminase [Listeria grayi DSM 20601] gi|299816401|gb|EFI83639.1| deoxycytidylate deaminase [Listeria grayi DSM 20601] Length = 160 Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ AI + + Sbjct: 28 VGATIVRDKRIIASGYNGSIAGGDHCTEHGCYIVDGHCIRTIHAEMNAILQCAKFGASTD 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 +LYVT PC C +I A I+ +YYG Sbjct: 88 --NAELYVTHFPCISCCKSIIQAGIKTVYYG 116 >gi|308484008|ref|XP_003104205.1| hypothetical protein CRE_01105 [Caenorhabditis remanei] gi|308258513|gb|EFP02466.1| hypothetical protein CRE_01105 [Caenorhabditis remanei] Length = 337 Score = 74.9 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 7/105 (6%) Query: 27 GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL-PEVDLYVTLEPCTM 85 G +AV +N ++S H + +R + + L D+++ EPC M Sbjct: 213 GCIAVQSNSVLSSGC----PSTHPLGHPVMEMVRNLQKRTGSDYLGTGSDVFLVNEPCAM 268 Query: 86 CAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTLATCHHSPEIY 129 C+ A+ RI+RL+Y N K G + ++G Q + + +H E++ Sbjct: 269 CSMALVHFRIKRLFY-VRNSKNGVLKDDGWQLHLEPSINHHYEVF 312 >gi|317402603|gb|EFV83165.1| riboflavin biosynthesis protein ribd [Achromobacter xylosoxidans C54] Length = 386 Score = 74.9 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 50/154 (32%), Gaps = 18/154 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M AL AQ P VG V V + +++ + HAE+ A+ Sbjct: 8 SDDLSWMRRALALAQTVMYSTAPNPRVGCVIVRDGRVLGEGATQPPGG----PHAEVCAL 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R E + +YVTLEPC C A+ A R+ +P G Sbjct: 64 RDAQAR--GESVAGATVYVTLEPCSHFGRTPPCVDALLAAAPARVVVAIGDPNPLVNGKG 121 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + GI + + + F Sbjct: 122 LARLRQAG----IAVTTGICREEALALNAGFISR 151 >gi|300865185|ref|ZP_07110005.1| riboflavin biosynthesis protein [Oscillatoria sp. PCC 6506] gi|300336816|emb|CBN55155.1| riboflavin biosynthesis protein [Oscillatoria sp. PCC 6506] Length = 388 Score = 74.9 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 42/127 (33%), Gaps = 17/127 (13%) Query: 4 GNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M +E A+ A P VG+ V + ++ + HAE+ A+R Sbjct: 31 DAAMMRRCIELARCALGKTAPNPLVGSAIVRDGLVVGEGFH----PGAGMPHAEVFALRE 86 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 +YV LEPC C+ A+ A + ++ G +P G Sbjct: 87 AGEKA-----LGATVYVNLEPCNHYGRTPPCSEALIAAGVAKVVVGMVDPNPLVSGGGIA 141 Query: 116 FYTLATC 122 A Sbjct: 142 RLREAGI 148 >gi|50554041|ref|XP_504429.1| YALI0E26543p [Yarrowia lipolytica] gi|49650298|emb|CAG80030.1| YALI0E26543p [Yarrowia lipolytica] Length = 357 Score = 74.9 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 60/161 (37%), Gaps = 37/161 (22%) Query: 10 CALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI-RMGCRIL 66 AL +A + E+PV + V +++SR + + + H + AI + + L Sbjct: 187 IALSKANSGTK--ELPVATLIVDPKTGEVLSRKLDTRHKQGNPLNHCTMEAIAEIASQEL 244 Query: 67 S-------------------------QEILPEV---DLYVTLEPCTMCAAAISLARIRRL 98 + + L +Y T EPC MCA A++ +R+ RL Sbjct: 245 ARRQERGTSKQEREREGKQETIDGEEDDRLYLCLEMHVYTTHEPCPMCAMALNHSRVGRL 304 Query: 99 YYGASNPKGGGI----ENGTQFYTLATCHHSPEIYPGISEQ 135 Y S+P GGI + + E++ + + Sbjct: 305 VYVESSPGSGGIEPNSGGSHGIHWNPQLNWKYEVWKWVGDD 345 >gi|15827206|ref|NP_301469.1| bifunctional riboflavin-specific deaminase/reductase [Mycobacterium leprae TN] gi|221229684|ref|YP_002503100.1| putative bifunctional riboflavin-specific deaminase/reductase [Mycobacterium leprae Br4923] gi|13092754|emb|CAC30063.1| putative bifunctional riboflavin-specific deaminase/reductase [Mycobacterium leprae] gi|219932791|emb|CAR70648.1| putative bifunctional riboflavin-specific deaminase/reductase [Mycobacterium leprae Br4923] Length = 339 Score = 74.9 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 23/137 (16%) Query: 8 MSCALEEAQ--NAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A+E++ A PVGAV V + +++ HAE++A+R Sbjct: 13 MRLAVEQSYLVKGATYPNPPVGAVIVDPDGRVVGVGATEPAGGD----HAEVVALRSAGV 68 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 VTLEPC C A+ A++ ++ Y ++P + T Sbjct: 69 TA-----AGAIAVVTLEPCNHYGKTPPCVNALLEAKVDKVAYAIADPNASAGGGAARL-T 122 Query: 119 LATCHHSPEIYPGISEQ 135 A H + G+ Sbjct: 123 AAGVH----VQSGVLAD 135 >gi|294635299|ref|ZP_06713797.1| riboflavin biosynthesis protein RibD [Edwardsiella tarda ATCC 23685] gi|291091308|gb|EFE23869.1| riboflavin biosynthesis protein RibD [Edwardsiella tarda ATCC 23685] Length = 319 Score = 74.9 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 15/103 (14%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106 HAE+ A+RM E YVTLEPC CA A+ A + R+ +P Sbjct: 2 HAEVHALRMAG-----ERARGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPN 56 Query: 107 GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 G A E+ G+ + + + F K R Sbjct: 57 PHVAGRGLYRLQQAG----IEVRHGLMLAEAEAVNKGFLKRMR 95 >gi|118462896|ref|YP_882551.1| riboflavin biosynthesis protein RibD [Mycobacterium avium 104] gi|118164183|gb|ABK65080.1| riboflavin biosynthesis protein RibD [Mycobacterium avium 104] Length = 341 Score = 74.9 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 53/151 (35%), Gaps = 22/151 (14%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+E++ PVGAV + + G D HAEILA+R + Sbjct: 13 MRLAIEQSNQVKGNTYPNPPVGAVVLDGRGEVVGVGGTEPAGGD---HAEILALRRAGDL 69 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + VTLEPC C A+ A + + Y ++P + Sbjct: 70 A-----AGGTVVVTLEPCNHHGKTPPCVDALLEAGVSTVVYAVADPNPQAAGGAGRLQEA 124 Query: 120 ATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149 + G+ S ++++ ++R Sbjct: 125 -----GVTVRSGLLADEVSGGPLREWLHKQR 150 >gi|78188600|ref|YP_378938.1| deoxycytidylate deaminase, putative [Chlorobium chlorochromatii CaD3] gi|78170799|gb|ABB27895.1| deoxycytidylate deaminase, putative [Chlorobium chlorochromatii CaD3] Length = 173 Score = 74.9 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 42/124 (33%), Gaps = 27/124 (21%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN------------------ 42 + FMS A ++ A +GAV V N I+S N Sbjct: 21 LSWDEYFMSVAHLVSRRATCTRAH-IGAVIVRENNILSTGYNGAPTGLPHCHDDNCRIYR 79 Query: 43 ------RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96 E T HAEI AI + + D+Y+T PC C + I+ Sbjct: 80 CTHPDGTVEENCVNTIHAEINAIAQAAKHGISIR--DSDIYITASPCIHCLKVLINVGIK 137 Query: 97 RLYY 100 +YY Sbjct: 138 TIYY 141 >gi|213961866|ref|ZP_03390132.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga sputigena Capno] gi|213955655|gb|EEB66971.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga sputigena Capno] Length = 146 Score = 74.9 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 17/121 (14%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV------------T 51 +M A+E A+ + + + VGA+ V + IIS N D Sbjct: 13 DKAYMRMAMEWAKLSYSQRKQ-VGAIMVKDRMIISDGYNGTPTGFDNCCEDEEGNTHWYV 71 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKGGG 109 HAE AI LY+T+ PC C+ I + I+R+ Y G + +G Sbjct: 72 LHAEANAIMKVASSTQSS--EGATLYITMSPCKECSKLIYQSGIKRVVYKEGYRDNEGLA 129 Query: 110 I 110 Sbjct: 130 F 130 >gi|145223918|ref|YP_001134596.1| CMP/dCMP deaminase, zinc-binding [Mycobacterium gilvum PYR-GCK] gi|145216404|gb|ABP45808.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium gilvum PYR-GCK] Length = 163 Score = 74.9 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 4/102 (3%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAIRM 61 + +E A+ A + P G++ + + + NR + D T H E AI Sbjct: 12 DDLRHLRRCVELAREAQDAGDEPFGSLLLDADGVTRVEDRNRV-KDGDATRHPEY-AIAK 69 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 +Y + E C MCAAA + + R+ Y AS Sbjct: 70 WAVENLSPD-DRATVYTSGEHCPMCAAAHAWVGLGRVVYAAS 110 >gi|294655936|ref|XP_458164.2| DEHA2C11066p [Debaryomyces hansenii CBS767] gi|199430728|emb|CAG86235.2| DEHA2C11066p [Debaryomyces hansenii] Length = 384 Score = 74.9 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 57/160 (35%), Gaps = 38/160 (23%) Query: 11 ALEEAQNAALRNEIPVGAVAVLNNKIISR-----AGNRN------RELKDVTAHAEILAI 59 ALEE Q A IP AV II++ + H+ + AI Sbjct: 215 ALEEHQTAYDTG-IP--AV-----TIIAKKSKINGEHEILTVKFDNRDNHPLEHSVMKAI 266 Query: 60 R-------------------MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 R + ++ +Y T EPC MC+ A+ +RI R+ Y Sbjct: 267 DDIAMKEKIRRCDLHGTTLDNADRTDLNYLCHDLLVYTTHEPCIMCSMALVHSRIGRIIY 326 Query: 101 GASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 P+ GG+ + Q + +I+ I E+ ++ Sbjct: 327 MKGVPETGGLSSNYQLGDRDGLNWKYDIWKWIGEEELSRL 366 >gi|193213074|ref|YP_001999027.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327] gi|193086551|gb|ACF11827.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327] Length = 194 Score = 74.9 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 8/113 (7%) Query: 8 MSCALEEAQNAALRN-EIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M +E A+ P A + K++S N HAE++AI + + Sbjct: 33 MRFVIEAARRNIEEKTGGPFAAAVFEHETGKLVSLGVNLVVSRNSSILHAEMVAIMLAQQ 92 Query: 65 ILSQEILPE-----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 L L + +L + EPC MC A+ + ++ + GA + I Sbjct: 93 QLDTYDLGDPGMPAHELLSSAEPCAMCFGALPWSGVQYVATGAQSEDAKSIGF 145 >gi|169829293|ref|YP_001699451.1| ComE operon protein 2 [Lysinibacillus sphaericus C3-41] gi|168993781|gb|ACA41321.1| ComE operon protein 2 [Lysinibacillus sphaericus C3-41] Length = 189 Score = 74.9 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 44/118 (37%), Gaps = 18/118 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49 + FM+ + A + + VGA V + +II+ N + + Sbjct: 4 ITWDQFFMAQSHLLALRSTCTR-LAVGATVVRDKRIIAGGYNGSITGDEHCIENGCYVVD 62 Query: 50 ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 T HAE+ A+ C DLYVT PC C +I A I R+YY Sbjct: 63 NHCVRTVHAEMNALLQ-CAKYGTPT-KGADLYVTHFPCLPCTKSIIQAGIERVYYATD 118 >gi|328767788|gb|EGF77836.1| hypothetical protein BATDEDRAFT_27114 [Batrachochytrium dendrobatidis JAM81] Length = 379 Score = 74.9 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 L + +D+Y+T EPC MCA A+ +RI R++YG G + + + + + +H Sbjct: 308 LEGYLCSGLDMYLTREPCAMCAMALVHSRIGRVFYGERRE-YGALGSAYKLHVHPSINHH 366 Query: 126 PEIY 129 +++ Sbjct: 367 YQVF 370 >gi|256787680|ref|ZP_05526111.1| riboflavin-specific deaminase [Streptomyces lividans TK24] Length = 405 Score = 74.9 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 43/120 (35%), Gaps = 18/120 (15%) Query: 8 MSCALEEA-QNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M ALE A P VG V + ++ +R T HAE+ A+R Sbjct: 25 MRRALELAGAEVGSTGSNPAVGCVLLDAEGTTVATGVHR----GPGTPHAEVDALRRA-- 78 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + VTLEPC C+ A+ A +RR+ Y ++P + Sbjct: 79 ---RGRHRGTTAVVTLEPCDHQGRTGPCSKALIEAGVRRVLYAVADPNRVAAGGARRLAD 135 >gi|145219913|ref|YP_001130622.1| CMP/dCMP deaminase, zinc-binding [Prosthecochloris vibrioformis DSM 265] gi|145206077|gb|ABP37120.1| CMP/dCMP deaminase, zinc-binding protein [Chlorobium phaeovibrioides DSM 265] Length = 180 Score = 74.9 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 43/121 (35%), Gaps = 27/121 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42 FMS A +Q A +GAV V +N I+S N Sbjct: 29 HEYFMSVARLISQRATCTRGH-IGAVIVRDNNILSTGYNGAPSGLPHCNETNCRIYRSTH 87 Query: 43 ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 E T HAEI AI + + + D+Y+T PC C + I+ +Y Sbjct: 88 PDGTVEENCVNTIHAEINAIAQAAKHGVS--IKDADIYITASPCIHCLKVLINVGIKTIY 145 Query: 100 Y 100 Y Sbjct: 146 Y 146 >gi|296271673|ref|YP_003654304.1| CMP/dCMP deaminase zinc-binding protein [Arcobacter nitrofigilis DSM 7299] gi|296095848|gb|ADG91798.1| CMP/dCMP deaminase zinc-binding protein [Arcobacter nitrofigilis DSM 7299] Length = 144 Score = 74.9 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 29/123 (23%) Query: 1 MKKGNVFMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGNRN------------- 44 M F++ A E A + + VGAV V + +I+S N Sbjct: 1 MISDKNFINIAHEIASASKCVSKQ----VGAVIVKDGRILSTGYNGTPAGYVNCKEHWND 56 Query: 45 ---RELKDVT----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 +E D + HAE+ AI R + +YVTLEPC+ C+ + A I+R Sbjct: 57 SYTKEHHDWSKTYEIHAEMNAIIWAARKGIS--IEGATIYVTLEPCSECSKNLIAAGIQR 114 Query: 98 LYY 100 + + Sbjct: 115 IVF 117 >gi|227529052|ref|ZP_03959101.1| competence protein ComEB [Lactobacillus vaginalis ATCC 49540] gi|227351064|gb|EEJ41355.1| competence protein ComEB [Lactobacillus vaginalis ATCC 49540] Length = 161 Score = 74.9 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 22/119 (18%) Query: 1 MKK----GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---------- 46 MKK FM A A + + VGAV V + +II+ N + Sbjct: 1 MKKRIDWDQYFMIQAALLASRSTCNR-LSVGAVLVRDKRIIAGGYNGSVSGDAHCIDDGC 59 Query: 47 -LKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L+D T HAE+ AI + LYVT PC C ++ A I+ + Y Sbjct: 60 YLRDGHCVRTIHAEMNAILQCAKFGISTD--GASLYVTDFPCLQCTKSLLQAGIKEINY 116 >gi|269123684|ref|YP_003306261.1| CMP/dCMP deaminase zinc-binding protein [Streptobacillus moniliformis DSM 12112] gi|268315010|gb|ACZ01384.1| CMP/dCMP deaminase zinc-binding protein [Streptobacillus moniliformis DSM 12112] Length = 159 Score = 74.9 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 42/121 (34%), Gaps = 30/121 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPV---GAVAVLNNKIISRAGNRN-----------RE 46 + FM A A + PV GA V ++KI+ N + Sbjct: 7 LSWDEYFMGIAFLSANRSKD----PVTQVGACIVKDSKIVGIGYNGFPIGSSDDEVPWEK 62 Query: 47 LKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 D HAE+ AI + S L +YVT PC CA +I I ++ Sbjct: 63 DGDFLNTKYAYVVHAELNAI-----LNSNRDLKGSTIYVTHFPCNECAKSIIQTGISKVI 117 Query: 100 Y 100 + Sbjct: 118 F 118 >gi|213403097|ref|XP_002172321.1| diaminohydroxyphosphoribosylamino-pyrimidine deaminase [Schizosaccharomyces japonicus yFS275] gi|212000368|gb|EEB06028.1| diaminohydroxyphosphoribosylamino-pyrimidine deaminase [Schizosaccharomyces japonicus yFS275] Length = 147 Score = 74.6 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 21/132 (15%) Query: 4 GNVFMSCALEEAQN------AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 + ++ AL+EA+ A VG+V V N +++S +R HAE Sbjct: 2 HSKYLRLALDEAKKCNPTDTAFC-----VGSVIVENGQVVSTGYSRELPGN---THAEES 53 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGI 110 AI + + +Y T+EPC C I + ++ G P + Sbjct: 54 AILKLLQRDPKHDFTRSVIYSTMEPCSKRLSGNVPCTQHIIANKFHKVVLGCREPTTFVV 113 Query: 111 ENGTQFYTLATC 122 G + A Sbjct: 114 CEGVRQLQAAGI 125 >gi|188582604|ref|YP_001926049.1| riboflavin biosynthesis protein RibD [Methylobacterium populi BJ001] gi|179346102|gb|ACB81514.1| riboflavin biosynthesis protein RibD [Methylobacterium populi BJ001] Length = 359 Score = 74.6 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 47/141 (33%), Gaps = 22/141 (15%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M AL + R VGAV V + +I+ +A HAE LA+ M Sbjct: 1 MRLALALGRRNLGRTWPNPSVGAVVVTPDGRIVGQA----VTAPGGRPHAEPLALAMAGE 56 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LYVTLEPC C A + + R+ +P G Sbjct: 57 AA-----RGATLYVTLEPCSHHGRTPPCTEATIRSGVARVVTAIEDPDPRVAGRGHAGLR 111 Query: 119 LATCHHSPEIYPGISEQRSRQ 139 A + G+ + + + Sbjct: 112 AAG----IAVETGLLREEAAR 128 >gi|288924860|ref|ZP_06418797.1| cytidine/deoxycytidylate deaminase family protein [Prevotella buccae D17] gi|315607887|ref|ZP_07882880.1| competence protein ComEB [Prevotella buccae ATCC 33574] gi|288338647|gb|EFC76996.1| cytidine/deoxycytidylate deaminase family protein [Prevotella buccae D17] gi|315250356|gb|EFU30352.1| competence protein ComEB [Prevotella buccae ATCC 33574] Length = 148 Score = 74.6 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 36/88 (40%), Gaps = 14/88 (15%) Query: 26 VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N + +T HAE AI R + Sbjct: 33 VGALVVKDKMIISDGYNGTPSGFENVCEDENHITKPYVLHAEANAITKLARSSNNSD--G 90 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYG 101 LYVT PC CA I A I+R+ YG Sbjct: 91 STLYVTASPCIECAKLIIQAGIKRVVYG 118 >gi|257055601|ref|YP_003133433.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Saccharomonospora viridis DSM 43017] gi|256585473|gb|ACU96606.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Saccharomonospora viridis DSM 43017] Length = 349 Score = 74.6 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 53/154 (34%), Gaps = 28/154 (18%) Query: 8 MSCALEEAQNAALRNEI----PVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 M AL A +A +R PVGAV + + + + HAE++A+R Sbjct: 15 MEVAL--ALSAGVRGNTSPNPPVGAVILDAEGRRVGTGATQPP----PGPHAEVVALREA 68 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 E VTLEPC C A+ A + + Y ++P + Sbjct: 69 G-----ERARGGTAVVTLEPCSHHGRTPPCTQALLDAGVAAVRYAVADPHPAASGGAERL 123 Query: 117 YTLATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149 ++ G+ + + ++ + R Sbjct: 124 RAA-----GVDVAGGVLAEEVASGPLRAWLHRER 152 >gi|283769499|ref|ZP_06342395.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bulleidia extructa W1219] gi|283103767|gb|EFC05153.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bulleidia extructa W1219] Length = 157 Score = 74.6 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 32/127 (25%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNN-KIISRAGN----------------- 42 + FM A A + P VGA V N +++S N Sbjct: 6 DSYFMGLAHLSALRSKD----PNTQVGAAIVDENHRVVSVGYNGLPRGCEDSDYPWSREG 61 Query: 43 RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E K HAE+ AI + S+ + + +YV+L PC CA AI + IRR+ Y Sbjct: 62 NVLETKYPYVVHAELNAI-----LNSKWPVKDCTIYVSLFPCNECAKAIIQSGIRRVVY- 115 Query: 102 ASNPKGG 108 S+ G Sbjct: 116 ESDKYNG 122 >gi|282859489|ref|ZP_06268594.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella bivia JCVIHMP010] gi|282587717|gb|EFB92917.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella bivia JCVIHMP010] Length = 144 Score = 74.6 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 ++ A A+N+ + VGA+ V + IIS N + ++T Sbjct: 9 DYRYLRMARIWAENSYCKR-RQVGALVVKDKMIISDGYNGTPSGFENVCEDDNNITKPYV 67 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC CA I A I+RL Y Sbjct: 68 LHAEANAITKLARSGNNS--EGSTLYVTASPCIECAKLIIQAGIKRLVYA 115 >gi|258539694|ref|YP_003174193.1| CMP/dCMP deaminase zinc-binding protein [Lactobacillus rhamnosus Lc 705] gi|257151370|emb|CAR90342.1| CMP/dCMP deaminase, zinc-binding protein [Lactobacillus rhamnosus Lc 705] gi|328480168|gb|EGF49113.1| CMP/dCMP deaminase zinc-binding protein [Lactobacillus rhamnosus MTCC 5462] Length = 154 Score = 74.6 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 20/114 (17%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV------------- 50 + F+ A + ++ + VGAV V ++II+ N D Sbjct: 18 DHYFLELAKKVSERSTCERAT-VGAVLVQEHRIIATGYNGAIS-GDPHCDEAGHLMRDGH 75 Query: 51 ---TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ AI +YV PC C A+ A I+R+ Y Sbjct: 76 CIRTIHAEMNAIIQCAANGVSTH--GATVYVNFFPCLNCTKALIQAGIKRVVYA 127 >gi|126696788|ref|YP_001091674.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus str. MIT 9301] gi|126543831|gb|ABO18073.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Prochlorococcus marinus str. MIT 9301] Length = 364 Score = 74.6 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 52/151 (34%), Gaps = 22/151 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 +M A+ A P VGAV + N +IS + K HAE +A Sbjct: 7 SHTKWMKRAIFLASLGKNTTSPNPRVGAVILDKNGSLISEGFH----FKAGMPHAEAMAF 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 +YV LEPC C + + ++++Y +P G Sbjct: 63 NNLKN-----DAKGGTMYVNLEPCCHQGKTPPCVDKVISSGLKKVYISMEDPDERVSGKG 117 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + A ++ G+ ++ S + + F Sbjct: 118 IKLLKEAG----IQVNLGLCKKESLDLNKAF 144 >gi|320335323|ref|YP_004172034.1| riboflavin biosynthesis protein RibD [Deinococcus maricopensis DSM 21211] gi|319756612|gb|ADV68369.1| riboflavin biosynthesis protein RibD [Deinococcus maricopensis DSM 21211] Length = 353 Score = 74.6 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 51/143 (35%), Gaps = 21/143 (14%) Query: 6 VFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 FM AL++A R PVG V V +++ R + HAE+ A++ Sbjct: 2 HFMHQALQQAALGLGRTAPNPPVGCVIVAGGEVVGRGFHPRAGQG----HAEVFALQDAG 57 Query: 64 RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 YVTLEPC CA A+ A + R+ A +P G Sbjct: 58 -----VRARGATAYVTLEPCSHTGRTPPCADALIRAGVARVVVAALDPNPVVAGRGVARL 112 Query: 118 TLATCHHSPEIYPGISEQRSRQI 140 H +++ G + + Sbjct: 113 RT----HGLDVHVGPLADAAVRQ 131 >gi|255007771|ref|ZP_05279897.1| putative deoxycytidylate deaminase [Bacteroides fragilis 3_1_12] gi|313145475|ref|ZP_07807668.1| deoxycytidylate deaminase [Bacteroides fragilis 3_1_12] gi|313134242|gb|EFR51602.1| deoxycytidylate deaminase [Bacteroides fragilis 3_1_12] Length = 145 Score = 74.6 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Query: 26 VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N + +VT HAE AI R + Sbjct: 33 VGALIVKDKMIISDGYNGTPSGFENICEDDNNVTKPYVLHAEANAITKIARSNNSSD--G 90 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 +YVT PC CA I A I+R+ Y Sbjct: 91 ATMYVTASPCIECAKLIIQAGIKRVVY 117 >gi|255693361|ref|ZP_05417036.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides finegoldii DSM 17565] gi|260620838|gb|EEX43709.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides finegoldii DSM 17565] Length = 149 Score = 74.6 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 15/109 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 ++ A A+N+ + VGA+ V + IIS N + +VT Sbjct: 11 DKRYIRMASIWAENSYCQRRK-VGALIVKDKMIISDGYNGTPSGFENVCEDENNVTKPYV 69 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI R + +YVT PC CA I A I+R+ Y Sbjct: 70 LHAEANAITKIARSNNSSD--GATMYVTASPCIECAKLIIQAGIKRVVY 116 >gi|315924110|ref|ZP_07920336.1| riboflavin biosynthesis protein RibD [Pseudoramibacter alactolyticus ATCC 23263] gi|315622512|gb|EFV02467.1| riboflavin biosynthesis protein RibD [Pseudoramibacter alactolyticus ATCC 23263] Length = 374 Score = 74.6 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 54/160 (33%), Gaps = 39/160 (24%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNN-----------KIISRAGNRNRELKDVT 51 + FM AL A+ N +++ + Sbjct: 12 QAEAFMRRALALARQGMGH---------TSPNPMVGCVVVQNGVVVAEGYHERVGGY--- 59 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNP 105 HAE A+ ++ L + DLYVTLEPC C I I R++ G+ + Sbjct: 60 -HAERNALT-----HCEKDLSDADLYVTLEPCCHYGKTPPCTEIIIERGIGRVFVGSLDV 113 Query: 106 KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A E+ GI E + R++ + F+ Sbjct: 114 NPKVAGRGVKILEAAG----IEVVTGILETKCRKLNEVFY 149 >gi|217969969|ref|YP_002355203.1| riboflavin biosynthesis protein RibD [Thauera sp. MZ1T] gi|217507296|gb|ACK54307.1| riboflavin biosynthesis protein RibD [Thauera sp. MZ1T] Length = 365 Score = 74.6 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 42/125 (33%), Gaps = 19/125 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VG V V + + + AHAE+ A+R YVTLEPC Sbjct: 31 VGCVIVRDGTTVGEGWHARAGE----AHAEVHALRQAGAAARGAT-----AYVTLEPCSH 81 Query: 84 ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 CA A+ A + R+ +P G + G+ + +++ Sbjct: 82 FGRTPPCADALIEAGVARVIAAMEDPNPLVAGRGLARLRASG----IAAAHGLLAEAAQE 137 Query: 140 IIQDF 144 + F Sbjct: 138 LNIGF 142 >gi|21673576|ref|NP_661641.1| deoxycytidylate deaminase, putative [Chlorobium tepidum TLS] gi|21646688|gb|AAM71983.1| deoxycytidylate deaminase, putative [Chlorobium tepidum TLS] Length = 175 Score = 74.6 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 42/121 (34%), Gaps = 27/121 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42 FM A ++ A VGAV V +N I+S N Sbjct: 30 HEYFMCVAHLISRRATCTRGH-VGAVIVRDNNILSTGYNGAPSGLPHCNETNCKIYRSIH 88 Query: 43 ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 E T HAEI AI + + + D+Y+T PC C + I+ +Y Sbjct: 89 PDGTVEENCVNTIHAEINAIAQAAKHGVS--IKDADIYITASPCIHCLKVLINVGIKTIY 146 Query: 100 Y 100 Y Sbjct: 147 Y 147 >gi|15888505|ref|NP_354186.1| bifunctional riboflavin deaminase-reductase [Agrobacterium tumefaciens str. C58] gi|15156207|gb|AAK86971.1| bifunctional riboflavin deaminase-reductase [Agrobacterium tumefaciens str. C58] Length = 414 Score = 74.6 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 47/147 (31%), Gaps = 21/147 (14%) Query: 3 KGNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM+ A+E + VG V V + +II+ A HAE A+ Sbjct: 6 DDEKFMARAIEVSLRHQGQTLTNPSVGCVLVKDGQIIAEA----VTAIGGRPHAERQALE 61 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ + R+ +P G Sbjct: 62 IAGEAA-----RGATAYVTLEPCSHWGKTPPCANALVEYGVARVVVAVDDPDERVSGRGY 116 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQII 141 A + G+ ++ + Sbjct: 117 TILRDAG----IVVETGLLRDEGKRAL 139 >gi|297843134|ref|XP_002889448.1| hydrolase/ zinc ion binding protein [Arabidopsis lyrata subsp. lyrata] gi|297335290|gb|EFH65707.1| hydrolase/ zinc ion binding protein [Arabidopsis lyrata subsp. lyrata] Length = 400 Score = 74.6 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 36/71 (50%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 D+++ LEPC MCA A+ RI+R++Y NP GG+ + + + +H ++ Sbjct: 328 TGYDIFLLLEPCAMCAMALVHQRIKRIFYAFPNPTAGGLGSVHRLQGEKSLNHHYAVFRV 387 Query: 132 ISEQRSRQIIQ 142 + + + + Sbjct: 388 LLPDDALRQMT 398 >gi|114571043|ref|YP_757723.1| riboflavin biosynthesis protein RibD [Maricaulis maris MCS10] gi|114341505|gb|ABI66785.1| riboflavin biosynthesis protein RibD [Maricaulis maris MCS10] Length = 207 Score = 74.6 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 46/155 (29%), Gaps = 23/155 (14%) Query: 3 KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-HAEILAI 59 +M A+ A+ VG V V + +II+ +D HAE + Sbjct: 5 DDARYMDLAVALARAQQGRTAPNPAVGCVLVRDGRIIATG-----ATQDGGRPHAERV-- 57 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + YVTLEPC CA + A I R + G Sbjct: 58 ---ALDAAGAEAAGATAYVTLEPCAHHGQTPPCADGLIQAGIERAVIACGDRFEQVSGRG 114 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 A + G+ E + + FF Sbjct: 115 LAILAAAG----MTVETGLRETDATSLYAGFFSRL 145 >gi|28493654|ref|NP_787815.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Tropheryma whipplei str. Twist] gi|28476696|gb|AAO44784.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Tropheryma whipplei str. Twist] Length = 371 Score = 74.6 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 24/137 (17%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ AQ+ + + P VG V + + ++IS+ + + HAEI+A+R I Sbjct: 16 MHRAITIAQHGPVFDRNPQVGCVILDRDYQLISQGWHM----GSGSEHAEIMALRGAKSI 71 Query: 66 LSQEILPEVDLYVTLEPCT------MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 LS+ +TLEPC+ C A+ A ++ + +G +P+ +G + + Sbjct: 72 LSEPY----TAVITLEPCSSAGQTGPCVRALLDAGVKHVVFGVHDPE----SSGAKVLSE 123 Query: 120 ATCHHSPEIYPGISEQR 136 A +I G+ E+ Sbjct: 124 AG----VKITYGVLERE 136 >gi|21673822|ref|NP_661887.1| cytidine and deoxycytidylate deaminase family protein [Chlorobium tepidum TLS] gi|21646954|gb|AAM72229.1| cytidine and deoxycytidylate deaminase family protein [Chlorobium tepidum TLS] Length = 194 Score = 74.6 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 47/135 (34%), Gaps = 19/135 (14%) Query: 23 EIPVGAVA--VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE-----VD 75 P A + + +++S N HAE++AI + L L + Sbjct: 49 GGPFAAAVFEIESGRLVSLGVNLVLTQNSSILHAEMVAIVLAQMKLGAYDLGGFGMPAHE 108 Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE-------- 127 L + EPC MC A+ + +R L GA + I F E Sbjct: 109 LVTSTEPCVMCFGAVLWSGVRHLATGALSEDARAIG----FDEGPKPEKWIEELEARGIR 164 Query: 128 IYPGISEQRSRQIIQ 142 + G+ +R ++Q Sbjct: 165 VTTGVERDTARDVLQ 179 >gi|299535731|ref|ZP_07049052.1| ComE operon protein 2 [Lysinibacillus fusiformis ZC1] gi|298728931|gb|EFI69485.1| ComE operon protein 2 [Lysinibacillus fusiformis ZC1] Length = 189 Score = 74.6 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 44/118 (37%), Gaps = 18/118 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49 + FM+ + A + + VGA V + +II+ N + + Sbjct: 4 ITWDQFFMAQSHLLALRSTCTR-LAVGATVVRDKRIIAGGYNGSITGDEHCIEKGCYVVD 62 Query: 50 ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 T HAE+ A+ C DLYVT PC C +I A I R+YY Sbjct: 63 NHCVRTVHAEMNALLQ-CAKYGTPT-KGADLYVTHFPCLPCTKSIIQAGIERVYYATD 118 >gi|222823268|ref|YP_002574841.1| riboflavin biosynthesis protein [Campylobacter lari RM2100] gi|222538489|gb|ACM63590.1| riboflavin biosynthesis protein [Campylobacter lari RM2100] Length = 330 Score = 74.6 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 64/175 (36%), Gaps = 42/175 (24%) Query: 3 KGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAEIL 57 +M+ A++EA P VG V + N KI+S +A K AHAE+ Sbjct: 2 NHEFYMNLAIDEAWK-YQFLTYPNPAVGCVILDKNGKILSIKAH--KEAGK---AHAELE 55 Query: 58 AIRMGCRIL--------------------SQEILPEVDLYVTLEPC------TMCAAAIS 91 A+ + L Q +L YV+LEPC CA S Sbjct: 56 AVSKALKELDPNLDLPQDANDLHEFICKNHQGLLKGATAYVSLEPCNHQGKTPPCAKLFS 115 Query: 92 LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 ++ + G +F ++ GI E+R++++++ F K Sbjct: 116 ELGFSEVFIAIKDEHKLASG-GVEFLKSKG----IKVQIGICEKRAKELLKPFLK 165 >gi|297838959|ref|XP_002887361.1| hydrolase/ zinc ion binding protein [Arabidopsis lyrata subsp. lyrata] gi|297333202|gb|EFH63620.1| hydrolase/ zinc ion binding protein [Arabidopsis lyrata subsp. lyrata] Length = 400 Score = 74.6 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 37/71 (52%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 D+++ LEPCTMCA A+ RI+R++Y NP GG+ + + + +H ++ Sbjct: 328 TGYDIFLLLEPCTMCAMALVHQRIKRIFYAFPNPTAGGLGSVHRLQGEKSLNHHYAVFRV 387 Query: 132 ISEQRSRQIIQ 142 + + + + Sbjct: 388 LLPDDALRQMT 398 >gi|322821975|gb|EFZ28159.1| hypothetical protein TCSYLVIO_5619 [Trypanosoma cruzi] Length = 384 Score = 74.6 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 37/58 (63%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 E+DL+V+ EPC MC+ A+ +R+RR++Y +NP GG+ + + + + +H ++ Sbjct: 295 NEIDLFVSHEPCVMCSMALVHSRVRRVFYCFANPTHGGLGSVFSIHAIPSLNHHFRVF 352 >gi|294101414|ref|YP_003553272.1| CMP/dCMP deaminase zinc-binding protein [Aminobacterium colombiense DSM 12261] gi|293616394|gb|ADE56548.1| CMP/dCMP deaminase zinc-binding protein [Aminobacterium colombiense DSM 12261] Length = 168 Score = 74.2 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 45/133 (33%), Gaps = 30/133 (22%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNREL 47 + FM A A R VGAV V + +IIS N +L Sbjct: 9 DSYFMMIAAVAATRGTCLRRK---VGAVIVRDLQIISTGYNGAPKGLPHCSEVGCLRDKL 65 Query: 48 KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + HAEI AI + LY T EPC+ C AI A IRR+ Sbjct: 66 GIPSGERHEICRGSHAEINAIAQAAAV--GTRTEGAVLYCTHEPCSFCTKAIINAGIRRI 123 Query: 99 YYGASNPKGGGIE 111 + P E Sbjct: 124 VFVYPYPDALASE 136 >gi|291003622|ref|ZP_06561595.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Saccharopolyspora erythraea NRRL 2338] Length = 348 Score = 74.2 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 48/139 (34%), Gaps = 21/139 (15%) Query: 8 MSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ A+ PVG V VL+ R HAE++A+R Sbjct: 17 MRTAIGAAEGVRGTTSPNPPVGCV-VLDAAGAVAGIGATRPPGGP--HAEVVALREAG-- 71 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E VTLEPC C A+ A + R+ + S+P G Sbjct: 72 ---ERARGGTAVVTLEPCSHTGRTPPCTDALLAAGVARVVHAVSDPMPVAAG-GADILRA 127 Query: 120 ATCHHSPEIYPGISEQRSR 138 A E++ G+ + + Sbjct: 128 AG----VEVHSGLLAEEAE 142 >gi|296129704|ref|YP_003636954.1| riboflavin biosynthesis protein RibD [Cellulomonas flavigena DSM 20109] gi|296021519|gb|ADG74755.1| riboflavin biosynthesis protein RibD [Cellulomonas flavigena DSM 20109] Length = 386 Score = 74.2 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 42/136 (30%), Gaps = 18/136 (13%) Query: 8 MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A A+ L VG V + ++ +R T HAE+ A+ Sbjct: 40 MRHAFGLAEQGPLGPNPRVGCVLLDRAGAVVGEGWHR----GAGTPHAEVAAL--ADARE 93 Query: 67 SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + VTLEPC C+ A+ A + R+ +P + Sbjct: 94 RGADVRGATAVVTLEPCDHTGRTGPCSVALLQAGVGRVVVSVQDPNPVAAGGAQRLRAA- 152 Query: 121 TCHHSPEIYPGISEQR 136 ++ G+ Sbjct: 153 ----GVDVVTGVLADE 164 >gi|199598395|ref|ZP_03211814.1| ComE operon protein 2 [Lactobacillus rhamnosus HN001] gi|258508483|ref|YP_003171234.1| CMP/dCMP deaminase [Lactobacillus rhamnosus GG] gi|199590714|gb|EDY98801.1| ComE operon protein 2 [Lactobacillus rhamnosus HN001] gi|257148410|emb|CAR87383.1| CMP/dCMP deaminase, zinc-binding protein [Lactobacillus rhamnosus GG] gi|259649793|dbj|BAI41955.1| competence protein [Lactobacillus rhamnosus GG] Length = 154 Score = 74.2 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 20/114 (17%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV------------- 50 + F+ A + ++ + VGAV V ++II+ N D Sbjct: 18 DHYFLELAKKVSERSTCERAT-VGAVLVQEHRIIATGYNGAIS-GDPHCDEAGHLMRDGH 75 Query: 51 ---TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ AI +YV PC C A+ A I+R+ Y Sbjct: 76 CIRTIHAEMNAIIQCAANGVSTH--GATVYVNFFPCLNCTKALIQAGIKRVVYA 127 >gi|71653641|ref|XP_815455.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70880510|gb|EAN93604.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 408 Score = 74.2 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 3/73 (4%) Query: 60 RMGCRILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + R + E+DL+V+ EPC MC+ A+ +R+RR++Y +NP GG+ + Sbjct: 304 QQAQRWTKDNVPYLANEIDLFVSHEPCVMCSMALVHSRVRRVFYCFANPTHGGLGSVFSI 363 Query: 117 YTLATCHHSPEIY 129 + + + +H ++ Sbjct: 364 HAIPSLNHHFRVF 376 >gi|332883144|gb|EGK03427.1| hypothetical protein HMPREF9456_01494 [Dysgonomonas mossii DSM 22836] Length = 149 Score = 74.2 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 31/109 (28%), Positives = 41/109 (37%), Gaps = 15/109 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN------------RELKDVT 51 +M A A+N+ + VGA+ V + IIS N E K Sbjct: 10 DERYMRMAAIWAENSYCKRRK-VGALIVKDKMIISDGYNGTPSGFENICEDENNETKAYV 68 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI + + +YVT PC CA I A I R+ Y Sbjct: 69 LHAEANAITKVACSHNSSL--GATMYVTTSPCIECAKLIIQAGITRVVY 115 >gi|325297264|ref|YP_004257181.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides salanitronis DSM 18170] gi|324316817|gb|ADY34708.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides salanitronis DSM 18170] Length = 144 Score = 74.2 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 42/110 (38%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDVTA---- 52 +M A A+N+ VGA+ V + IIS N E ++ Sbjct: 12 DKRYMRMATIWAENSYCTRRK-VGALIVKDKMIISDGYNGTPAGFENVCEDENGLTKPYV 70 Query: 53 -HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC CA I A I+R+ Y Sbjct: 71 LHAEANAITKIARSNNSS--EGATLYVTASPCIECAKLIIQAGIKRVVYA 118 >gi|297734758|emb|CBI16992.3| unnamed protein product [Vitis vinifera] Length = 402 Score = 74.2 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 D+Y+ EPC MCA A+ RIRR++Y NP G + + + + +H ++ Sbjct: 330 TGYDIYLVWEPCAMCAMALVHQRIRRIFYAFPNPNAGALGSVHRLQGEKSLNHHYAVFRV 389 Query: 132 ISEQR 136 + Sbjct: 390 SLPEE 394 >gi|163847753|ref|YP_001635797.1| riboflavin biosynthesis protein RibD [Chloroflexus aurantiacus J-10-fl] gi|222525619|ref|YP_002570090.1| riboflavin biosynthesis protein RibD [Chloroflexus sp. Y-400-fl] gi|163669042|gb|ABY35408.1| riboflavin biosynthesis protein RibD [Chloroflexus aurantiacus J-10-fl] gi|222449498|gb|ACM53764.1| riboflavin biosynthesis protein RibD [Chloroflexus sp. Y-400-fl] Length = 391 Score = 74.2 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 21/108 (19%) Query: 9 SCALEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 AL++A AA+ PVGAV V + +++ + HAE +A+ Sbjct: 15 ELALQQA--AAVVGRTSPNPPVGAVVVRDGQVVGLGATQPAGG----PHAERIAL----- 63 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106 + E DLY TLEPC C AI A IRR+++ A +P Sbjct: 64 AAAGERARGADLYTTLEPCTFYGRTPPCTEAIIAAGIRRVFFIAHDPD 111 >gi|258621774|ref|ZP_05716805.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258626283|ref|ZP_05721130.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258581335|gb|EEW06237.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258586005|gb|EEW10723.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 110 Score = 74.2 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 32/70 (45%) Query: 46 ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 E D TAHAE+ AIR C+ + L + L + EPC MC + I ++ + A + Sbjct: 2 ENNDPTAHAEVEAIRDACKNTKKPHLRGLTLLASGEPCAMCYLNAMYSGISKVLFAADSN 61 Query: 106 KGGGIENGTQ 115 + + Sbjct: 62 EAAVHGFDYR 71 >gi|257470169|ref|ZP_05634261.1| deoxycytidylate deaminase [Fusobacterium ulcerans ATCC 49185] gi|317064387|ref|ZP_07928872.1| deoxycytidylate deaminase [Fusobacterium ulcerans ATCC 49185] gi|313690063|gb|EFS26898.1| deoxycytidylate deaminase [Fusobacterium ulcerans ATCC 49185] Length = 163 Score = 74.2 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 46/122 (37%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------- 42 ++ FM AL A+ + P VGA V + II N Sbjct: 7 IEWDEYFMGVALLSAKRSKD----PNTQVGACIVNEERRIIGVGYNGLPKGCSDDEFPWE 62 Query: 43 RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 R E D HAE+ AI + S + L LYV L PC C+ AI + I+ L Sbjct: 63 REGEFLDTKYPFVCHAELNAI-----LNSTKTLKNCTLYVALFPCHECSKAIIQSGIKEL 117 Query: 99 YY 100 Y Sbjct: 118 VY 119 >gi|160887077|ref|ZP_02068080.1| hypothetical protein BACOVA_05093 [Bacteroides ovatus ATCC 8483] gi|237721349|ref|ZP_04551830.1| deoxycytidylate deaminase [Bacteroides sp. 2_2_4] gi|260171610|ref|ZP_05758022.1| deoxycytidylate deaminase [Bacteroides sp. D2] gi|293369429|ref|ZP_06616014.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides ovatus SD CMC 3f] gi|299148576|ref|ZP_07041638.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 3_1_23] gi|315919924|ref|ZP_07916164.1| deoxycytidylate deaminase [Bacteroides sp. D2] gi|156107488|gb|EDO09233.1| hypothetical protein BACOVA_05093 [Bacteroides ovatus ATCC 8483] gi|229449145|gb|EEO54936.1| deoxycytidylate deaminase [Bacteroides sp. 2_2_4] gi|292635596|gb|EFF54103.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides ovatus SD CMC 3f] gi|298513337|gb|EFI37224.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 3_1_23] gi|313693799|gb|EFS30634.1| deoxycytidylate deaminase [Bacteroides sp. D2] Length = 149 Score = 74.2 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 15/112 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT- 51 ++ ++ A A+N+ + VGA+ V + IIS N + ++T Sbjct: 8 LELDKRYIRMASIWAENSYCQRRK-VGALIVKDKMIISDGYNGTPSGFENVCEDENNLTK 66 Query: 52 ---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI R + +YVT PC CA I A I+R+ Y Sbjct: 67 PYVLHAEANAITKIARSNNSSD--GATMYVTASPCIECAKLIIQAGIKRVVY 116 >gi|218201691|gb|EEC84118.1| hypothetical protein OsI_30450 [Oryza sativa Indica Group] Length = 411 Score = 74.2 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 3/79 (3%) Query: 51 TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 AH AI + D+Y+ EPC+MCA A+ R +R++Y NP G + Sbjct: 317 IAH---EAICDDLSETRPYLCTGFDIYLVWEPCSMCAMALVHQRFKRIFYAFPNPITGAL 373 Query: 111 ENGTQFYTLATCHHSPEIY 129 + + + + +H ++ Sbjct: 374 GSVYRLHGEKSLNHRYSVF 392 >gi|115478038|ref|NP_001062614.1| Os09g0128600 [Oryza sativa Japonica Group] gi|50252596|dbj|BAD28768.1| cytidine/deoxycytidylate deaminase-like protein [Oryza sativa Japonica Group] gi|50252628|dbj|BAD28798.1| cytidine/deoxycytidylate deaminase-like protein [Oryza sativa Japonica Group] gi|113630847|dbj|BAF24528.1| Os09g0128600 [Oryza sativa Japonica Group] gi|215694768|dbj|BAG89959.1| unnamed protein product [Oryza sativa Japonica Group] gi|222641086|gb|EEE69218.1| hypothetical protein OsJ_28439 [Oryza sativa Japonica Group] Length = 411 Score = 74.2 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 3/79 (3%) Query: 51 TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 AH AI + D+Y+ EPC+MCA A+ R +R++Y NP G + Sbjct: 317 IAH---EAICDDLSETRPYLCTGFDIYLVWEPCSMCAMALVHQRFKRIFYAFPNPITGAL 373 Query: 111 ENGTQFYTLATCHHSPEIY 129 + + + + +H ++ Sbjct: 374 GSVYRLHGEKSLNHRYSVF 392 >gi|213416666|ref|ZP_03349810.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 141 Score = 74.2 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 53/153 (34%), Gaps = 21/153 (13%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V N I+ + HAE+ A+R Sbjct: 2 QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 M YVTLEPC C A+ A + R+ +P G Sbjct: 58 MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ + + + F K Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKR 141 >gi|225459965|ref|XP_002266270.1| PREDICTED: hypothetical protein, partial [Vitis vinifera] Length = 397 Score = 74.2 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 D+Y+ EPC MCA A+ RIRR++Y NP G + + + + +H ++ Sbjct: 325 TGYDIYLVWEPCAMCAMALVHQRIRRIFYAFPNPNAGALGSVHRLQGEKSLNHHYAVFRV 384 Query: 132 ISEQR 136 + Sbjct: 385 SLPEE 389 >gi|134098691|ref|YP_001104352.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Saccharopolyspora erythraea NRRL 2338] gi|133911314|emb|CAM01427.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Saccharopolyspora erythraea NRRL 2338] Length = 345 Score = 74.2 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 48/139 (34%), Gaps = 21/139 (15%) Query: 8 MSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ A+ PVG V VL+ R HAE++A+R Sbjct: 14 MRTAIGAAEGVRGTTSPNPPVGCV-VLDAAGAVAGIGATRPPGGP--HAEVVALREAG-- 68 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 E VTLEPC C A+ A + R+ + S+P G Sbjct: 69 ---ERARGGTAVVTLEPCSHTGRTPPCTDALLAAGVARVVHAVSDPMPVAAG-GADILRA 124 Query: 120 ATCHHSPEIYPGISEQRSR 138 A E++ G+ + + Sbjct: 125 AG----VEVHSGLLAEEAE 139 >gi|326799622|ref|YP_004317441.1| CMP/dCMP deaminase zinc-binding protein [Sphingobacterium sp. 21] gi|326550386|gb|ADZ78771.1| CMP/dCMP deaminase zinc-binding protein [Sphingobacterium sp. 21] Length = 149 Score = 74.2 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 51/142 (35%), Gaps = 25/142 (17%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN------------------RNR 45 +FM+ ALE A+ + VGAV + +IIS N Sbjct: 7 DEIFMNLALELAERSHCVKAH-VGAVLAKDTRIISIGYNGPPSGTHNCDQEWPLEGCARD 65 Query: 46 ELKDVTA--HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + HAE AI + + L LY TL PC CA I A I ++ Y S Sbjct: 66 SKGSCSLALHAEENAILYAVKNGAG--LQGATLYTTLSPCLPCARLIYSAGIVKVLYKYS 123 Query: 104 NPKGGGIEN--GTQFYTLATCH 123 + G+ + G F + Sbjct: 124 YAEYKGLTSDEGVDFLNRFGVN 145 >gi|317503536|ref|ZP_07961560.1| cytidine/deoxycytidylate deaminase [Prevotella salivae DSM 15606] gi|315665348|gb|EFV04991.1| cytidine/deoxycytidylate deaminase [Prevotella salivae DSM 15606] Length = 150 Score = 74.2 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 43/110 (39%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD--------VTA--- 52 N ++ A A+N+ VGA+ V + IIS N D VT Sbjct: 11 DNRYLRMARIWAENSYCLR-RQVGALVVKDKMIISDGYNGTPSGFDNVCEDNEGVTYPYV 69 Query: 53 -HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC CA I A I+R+ Y Sbjct: 70 LHAEANAITKLARSNNNSD--GSTLYVTASPCIECAKLIIQAGIKRVVYA 117 >gi|323342858|ref|ZP_08083090.1| competence protein comEB [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463970|gb|EFY09164.1| competence protein comEB [Erysipelothrix rhusiopathiae ATCC 19414] Length = 159 Score = 74.2 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 42/128 (32%), Gaps = 33/128 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------R 43 + FM A A + P VGA V K I+ N Sbjct: 8 ISWDEYFMGLAHLSALRSKD----PSTQVGAAIVDQQKKIVGIGYNGLPTGLSDDAFPWE 63 Query: 44 NRELKDVTA-----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 T HAE+ AI + L +YV+L PC C+ AI + I+ + Sbjct: 64 REGDFQTTKYAYVVHAELNAILNA-----TQSLQGCTIYVSLFPCNECSKAIIQSGIKEI 118 Query: 99 YYGASNPK 106 Y + K Sbjct: 119 VY--EDDK 124 >gi|330466988|ref|YP_004404731.1| riboflavin biosynthesis protein ribd [Verrucosispora maris AB-18-032] gi|328809959|gb|AEB44131.1| riboflavin biosynthesis protein ribd [Verrucosispora maris AB-18-032] Length = 353 Score = 74.2 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 44/141 (31%), Gaps = 25/141 (17%) Query: 8 MSCALEEAQNAALR---NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+E A N + VG V + + +++ + HAEI+A+ Sbjct: 10 MRRAIELAARGLGTTSPNPV-VGCVLLDADGEVVGEGFHAYAGG----PHAEIVALAQAG 64 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 VTLEPC C+ A+ A++ R+ +P Sbjct: 65 H-----RAKGGTAVVTLEPCDHTGRTGPCSDALVQAQVARVVIAVPDPTPVAAGGAATLR 119 Query: 118 TLATCHHSPEIYPGISEQRSR 138 + G+ + Sbjct: 120 AA-----GIRVDLGVRATEAE 135 >gi|254775815|ref|ZP_05217331.1| riboflavin biosynthesis protein RibD [Mycobacterium avium subsp. avium ATCC 25291] Length = 341 Score = 74.2 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 53/151 (35%), Gaps = 22/151 (14%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+E++ PVGAV + + G D HAEILA+R + Sbjct: 13 MRLAIEQSNQVKGNTYPNPPVGAVVLDGRGEVVGVGGTEPAGGD---HAEILALRRAGDL 69 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + VTLEPC C A+ A + + Y ++P + Sbjct: 70 A-----AGGTVVVTLEPCNHHGKTPPCVDALLEAGVSTVVYAIADPNPQAAGGAGRLQEA 124 Query: 120 ATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149 + G+ S ++++ ++R Sbjct: 125 -----GVTVRSGLLADEVSGGPLREWLHKQR 150 >gi|86740847|ref|YP_481247.1| CMP/dCMP deaminase, zinc-binding [Frankia sp. CcI3] gi|86567709|gb|ABD11518.1| CMP/dCMP deaminase, zinc-binding [Frankia sp. CcI3] Length = 150 Score = 73.8 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 14/112 (12%) Query: 3 KGNVFMSCALEEAQNAA-LRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ A+E A VGAV V NN+ I+ +R E+ D HAE A+ Sbjct: 5 DDHRWMTRAIELAHRCPPAAGAYSVGAVIVDKNNQEIAFGFSR--EVDDAV-HAEESAL- 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNP 105 L +Y TLEPC+ C I A+I R+ P Sbjct: 61 -AKIGPGDPRLATATIYSTLEPCSQRKSRPRTCTQLILEAKIPRVVIAWREP 111 >gi|87310393|ref|ZP_01092523.1| hypothetical protein DSM3645_29881 [Blastopirellula marina DSM 3645] gi|87286892|gb|EAQ78796.1| hypothetical protein DSM3645_29881 [Blastopirellula marina DSM 3645] Length = 481 Score = 73.8 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 35/159 (22%) Query: 8 MSCALEEAQNAALR---NEIP---VGAVAVLNNKII---SRAGNRNRELKDVTAHAEILA 58 M A+E + + + P VGAV V + I +R EL+D HAE Sbjct: 2 MEKAIEVMRQSVQEHRPDGSPSPQVGAVLVRPDGSIETAARG-----ELRDG-NHAEFTL 55 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPKGGGIE 111 + R + E L L+ TLEPC CA I ARIR +Y G + Sbjct: 56 LE---RKCAAENLEGCVLFATLEPCLNRNSPKRGCARHIVGARIREVYVGIEDDNPKVAG 112 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQII----QDFFK 146 G ++ + + + ++ +++I + FF+ Sbjct: 113 KGIEYLRRSG------VTVHLFDRELQEVILDENKSFFE 145 >gi|255325040|ref|ZP_05366146.1| riboflavin biosynthesis protein RibD [Corynebacterium tuberculostearicum SK141] gi|255297605|gb|EET76916.1| riboflavin biosynthesis protein RibD [Corynebacterium tuberculostearicum SK141] Length = 340 Score = 73.8 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 20/110 (18%) Query: 13 EEAQNAALRN----EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A A +R PVGAV V +I+ + AHAE++A+R Sbjct: 17 AMAAGAEVRGTTSPNPPVGAVIVSPAGEIVGVGATQPVGG----AHAEVMALREAGDKA- 71 Query: 68 QEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 VTLEPC CA A+ A + R+YY ++P Sbjct: 72 ----RGATAVVTLEPCAHTGRTGPCAQALIDAGVARVYYLHADPTPQAAG 117 >gi|313901005|ref|ZP_07834493.1| cytidine and deoxycytidylate deaminase zinc-binding region [Clostridium sp. HGF2] gi|312953963|gb|EFR35643.1| cytidine and deoxycytidylate deaminase zinc-binding region [Clostridium sp. HGF2] Length = 164 Score = 73.8 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 31/119 (26%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------RNRE 46 FM A A+ + P VGAV V ++++S N Sbjct: 10 DEYFMGLAHLSAKRSKD----PSTQVGAVIVSSEHRVVSIGYNGFPNGCSDDEFPWDREG 65 Query: 47 LKDVTA-----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI + S+ L +YV+L PC CA AI + I R+ Y Sbjct: 66 DFGNTKYPYVVHAELNAI-----LNSKHDLKGCSIYVSLFPCNECAKAIIQSGISRIVY 119 >gi|268678892|ref|YP_003303323.1| riboflavin biosynthesis protein RibD [Sulfurospirillum deleyianum DSM 6946] gi|268616923|gb|ACZ11288.1| riboflavin biosynthesis protein RibD [Sulfurospirillum deleyianum DSM 6946] Length = 338 Score = 73.8 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 59/172 (34%), Gaps = 40/172 (23%) Query: 4 GNVFMSCALEEA--QNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 N M AL+ A VGAV + +I+ +R K T HAE+LA++ Sbjct: 6 DNALMQKALDAAWHYQVLTFPNPAVGAVVSNDAGEILGMGAHR----KAGTPHAEVLALK 61 Query: 61 MG----------------------CRILSQEILPEVDLYVTLEPC------TMCAAAISL 92 + Q + + L+VTLEPC C++ I Sbjct: 62 EAYLTLTHDTRIEALSDSMALHLFLKENHQHLFSNLSLHVTLEPCHHFGKTPPCSSLIEA 121 Query: 93 ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 I+R+ G+ + G + ++ G ++ ++ F Sbjct: 122 LGIKRVVIGSYDESLRAKGGGAYLQS-----RGVDVSFGCLKEACDTLLTPF 168 >gi|218129661|ref|ZP_03458465.1| hypothetical protein BACEGG_01240 [Bacteroides eggerthii DSM 20697] gi|317477506|ref|ZP_07936731.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides eggerthii 1_2_48FAA] gi|217988391|gb|EEC54714.1| hypothetical protein BACEGG_01240 [Bacteroides eggerthii DSM 20697] gi|316906307|gb|EFV28036.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides eggerthii 1_2_48FAA] Length = 145 Score = 73.8 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Query: 26 VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N + ++T HAE AI R + Sbjct: 34 VGALIVKDKMIISDGYNGTPSGFENVCEDENNITKPYVLHAEANAITKIARSNNSSN--G 91 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 +YVT PC CA I A I+R+ Y Sbjct: 92 ATMYVTASPCIECAKLIIQAGIKRVVY 118 >gi|311739500|ref|ZP_07713335.1| riboflavin biosynthesis protein RibD [Corynebacterium pseudogenitalium ATCC 33035] gi|311305316|gb|EFQ81384.1| riboflavin biosynthesis protein RibD [Corynebacterium pseudogenitalium ATCC 33035] Length = 340 Score = 73.8 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 20/110 (18%) Query: 13 EEAQNAALRN----EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67 A A +R PVGAV V +I+ + AHAE++A+R Sbjct: 17 AMAAGAEVRGTTSPNPPVGAVIVSPAGEIVGVGATQPVGG----AHAEVMALREAGDKA- 71 Query: 68 QEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 VTLEPC CA A+ A + R+YY ++P Sbjct: 72 ----RGATAVVTLEPCAHTGRTGPCAQALIDAGVARVYYLHADPTPQAAG 117 >gi|310779654|ref|YP_003967987.1| CMP/dCMP deaminase zinc-binding protein [Ilyobacter polytropus DSM 2926] gi|309748977|gb|ADO83639.1| CMP/dCMP deaminase zinc-binding protein [Ilyobacter polytropus DSM 2926] Length = 165 Score = 73.8 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 44/119 (36%), Gaps = 31/119 (26%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-------------RNR- 45 FM AL A+ + P VGA V NKI+ N Sbjct: 12 DEYFMGIALLSAKRSKD----PSTQVGACIVNKENKIVGVGYNGFPKGCSDDNFPWDREG 67 Query: 46 ---ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E K HAE AI + S + L + +YV L PC CA +I + I+ + + Sbjct: 68 EFLETKYPFVMHAEQNAI-----LNSIKKLSDCTIYVGLFPCHECAKSIIQSGIKEVVF 121 >gi|193212376|ref|YP_001998329.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327] gi|193085853|gb|ACF11129.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327] Length = 173 Score = 73.8 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 42/121 (34%), Gaps = 27/121 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42 FM A ++ A +GAV V +N I+S N Sbjct: 28 HEYFMCVAHLISRRATCTRGH-IGAVIVRDNNILSTGYNGAPSGLPHCNETNCKIYRSTH 86 Query: 43 ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 E T HAEI AI + + + D+Y+T PC C + I+ +Y Sbjct: 87 PDGTVEENCVNTIHAEINAIAQAAKHGVS--IKDADIYITASPCIHCLKVLINVGIKTIY 144 Query: 100 Y 100 Y Sbjct: 145 Y 145 >gi|298481407|ref|ZP_06999599.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. D22] gi|298272271|gb|EFI13840.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. D22] Length = 149 Score = 73.8 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 15/112 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT- 51 ++ ++ A A+N+ + VGA+ V + IIS N + ++T Sbjct: 8 LELDKRYIRMASIWAENSYCQRRK-VGALIVKDKMIISDGYNGTPSGFENVCEDENNLTK 66 Query: 52 ---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI R + +YVT PC CA I A I+R+ Y Sbjct: 67 PYVLHAEANAITKIARSNNSSD--GATMYVTASPCIECAKLIIQAGIKRVVY 116 >gi|269795119|ref|YP_003314574.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Sanguibacter keddieii DSM 10542] gi|269097304|gb|ACZ21740.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Sanguibacter keddieii DSM 10542] Length = 393 Score = 73.8 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 51/167 (30%), Gaps = 43/167 (25%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAVLNN-------------------------KIISRAG 41 M+ AL+ A+ P VG V + + ++++ Sbjct: 27 MAHALDLARRGPAHGPNPQVGCVILAADTADATRTAGTPGATSAGGAEASRPRRVLAVGW 86 Query: 42 NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARI 95 +R T HAE A+ S + VTLEPC CA A+ A + Sbjct: 87 HR----GAGTPHAEADALARASA--SGVDVRGATAVVTLEPCNHTGRTGPCAQALLDAGV 140 Query: 96 RRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 + +P + H + G+ ++++ Sbjct: 141 AEVVVSVGDPNPVASGGMGHLRS-----HGVAVRTGLLADEGEELLR 182 >gi|71415321|ref|XP_809731.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70874158|gb|EAN87880.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 384 Score = 73.8 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 3/73 (4%) Query: 60 RMGCRILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + R + E+DL+V+ EPC MC+ A+ +R+RR++Y +NP GG+ + Sbjct: 280 QQAQRWTKDNVPYLANEIDLFVSHEPCVMCSMALVHSRVRRVFYCFANPTHGGLGSVFSI 339 Query: 117 YTLATCHHSPEIY 129 +T+ +H ++ Sbjct: 340 HTIPLLNHHFRVF 352 >gi|257453281|ref|ZP_05618580.1| deoxycytidylate deaminase [Fusobacterium sp. 3_1_5R] gi|257467124|ref|ZP_05631435.1| deoxycytidylate deaminase [Fusobacterium gonidiaformans ATCC 25563] gi|315918255|ref|ZP_07914495.1| deoxycytidylate deaminase [Fusobacterium gonidiaformans ATCC 25563] gi|317059814|ref|ZP_07924299.1| deoxycytidylate deaminase [Fusobacterium sp. 3_1_5R] gi|313685490|gb|EFS22325.1| deoxycytidylate deaminase [Fusobacterium sp. 3_1_5R] gi|313692130|gb|EFS28965.1| deoxycytidylate deaminase [Fusobacterium gonidiaformans ATCC 25563] Length = 160 Score = 73.8 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 44/122 (36%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------R 43 + FM AL A + P VGA V +K II N Sbjct: 7 ITWDEYFMGVALLSAMRSKD----PNTQVGACIVSPDKKIIGLGYNGLPKGCEDDEFPWE 62 Query: 44 NR----ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 E K HAE+ AI + S + L +YV L PC C+ AI + IR + Sbjct: 63 REGEFLETKYPYVCHAELNAI-----LNSTQSLKNCTIYVALFPCHECSKAIIQSGIREI 117 Query: 99 YY 100 Y Sbjct: 118 VY 119 >gi|254822405|ref|ZP_05227406.1| riboflavin biosynthesis protein RibD [Mycobacterium intracellulare ATCC 13950] Length = 341 Score = 73.8 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 54/151 (35%), Gaps = 22/151 (14%) Query: 8 MSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+E++ PVGAV + + G D HAEILA+R + Sbjct: 13 MRLAIEQSTLVKGTTYPNPPVGAVILDAGGEVVGVGGTEPAGGD---HAEILALRRAGDL 69 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + VTLEPC C A+ A + + Y ++P + Sbjct: 70 A-----AGGTVVVTLEPCNHYGKTPPCVNALLDANVATVVYAVADPNPQAAGGAARLEEA 124 Query: 120 ATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149 + G+ +R ++++ ++R Sbjct: 125 -----GVAVRSGVLADEVARGPLREWLHKQR 150 >gi|121595493|ref|YP_987389.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Acidovorax sp. JS42] gi|120607573|gb|ABM43313.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Acidovorax sp. JS42] Length = 366 Score = 73.8 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 38/148 (25%), Positives = 54/148 (36%), Gaps = 19/148 (12%) Query: 9 SCALEEAQNAA-LRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 AL A A L N P VG V N ++ + + +HAE++A+R Sbjct: 5 DQALGLAAQALFLSNPNPRVGCVITDVNGNMLGQGFTQRAGA----SHAEVMALRDAAAR 60 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 YVTLEPC C A+ A I + ++P G F L Sbjct: 61 GCDVR--GATAYVTLEPCAHQGRTGPCCDALIQAGIAHVVASIADPNPLVAGQG--FARL 116 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 E+ PG +SR++ FF Sbjct: 117 RAAGVQVEVGPG--GTQSRELNIGFFSR 142 >gi|56566286|gb|AAV98473.1| FCY1 [Cryptococcus neoformans var. neoformans] Length = 225 Score = 73.8 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 14/111 (12%) Query: 6 VFMSCALEEAQNAALRN--EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A EA A + P G V +++++ N+ + H EI AI Sbjct: 39 HWMRVA-NEAVYADGHPCPQAPFGTAIVNTTSDELVCVTSNKVGITGNPAMHGEISAITY 97 Query: 62 ------GCRILSQEILPE---VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 SQEIL LY EPC MCA+AI A + + YG S Sbjct: 98 CTEVLTAKGWTSQEILAGWKDFSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148 >gi|120403674|ref|YP_953503.1| riboflavin biosynthesis protein RibD [Mycobacterium vanbaalenii PYR-1] gi|119956492|gb|ABM13497.1| riboflavin biosynthesis protein RibD [Mycobacterium vanbaalenii PYR-1] Length = 333 Score = 73.8 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 51/148 (34%), Gaps = 34/148 (22%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAV-LNNKIISRAGNRNRELKDVTA----- 52 MK M+ A+E+++ R PVGAV + + +I TA Sbjct: 1 MKLDAA-MAAAIEQSERVKGRTYPNPPVGAVILDRDGEIAGVG---------ATAPPGGP 50 Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106 HAE++A+R E VTLEPC C A+ A I + + ++P Sbjct: 51 HAEVVALRRAG-----ERAVGGTAVVTLEPCNHFGRTPPCVDALLDAGIAEVAFAVADPD 105 Query: 107 GGGIENGTQFYTLATCHHSPEIYPGISE 134 + + G+ Sbjct: 106 PVAAGGAARLAES-----GVRVSAGVLA 128 >gi|29349668|ref|NP_813171.1| deoxycytidylate deaminase [Bacteroides thetaiotaomicron VPI-5482] gi|253569961|ref|ZP_04847370.1| deoxycytidylate deaminase [Bacteroides sp. 1_1_6] gi|298383932|ref|ZP_06993493.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 1_1_14] gi|29341578|gb|AAO79365.1| deoxycytidylate deaminase [Bacteroides thetaiotaomicron VPI-5482] gi|251840342|gb|EES68424.1| deoxycytidylate deaminase [Bacteroides sp. 1_1_6] gi|298263536|gb|EFI06399.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 1_1_14] Length = 149 Score = 73.8 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 15/112 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT- 51 ++ ++ A A+N+ + VGA+ V + IIS N + ++T Sbjct: 8 LELDKRYIRMASIWAENSYCQRRK-VGALIVKDKMIISDGYNGTPSGFENVCEDENNLTK 66 Query: 52 ---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI R + +YVT PC CA I A I+R+ Y Sbjct: 67 PYVLHAEANAITKIARSNNSSD--GATMYVTASPCIECAKLIIQAGIKRVVY 116 >gi|256820204|ref|YP_003141483.1| CMP/dCMP deaminase zinc-binding [Capnocytophaga ochracea DSM 7271] gi|256581787|gb|ACU92922.1| CMP/dCMP deaminase zinc-binding [Capnocytophaga ochracea DSM 7271] Length = 146 Score = 73.8 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 17/121 (14%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV------------T 51 +M A+E A+ + + + VGA+ V + IIS N D Sbjct: 13 DKAYMCMAMEWAKLSYSQRKQ-VGAIIVKDRMIISDGYNGTPTGFDNCCEDEEGNTHWYV 71 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKGGG 109 HAE AI LY+T+ PC C+ I + I+R+ Y G + +G Sbjct: 72 LHAEANAIMKVASSTQSS--EGATLYITMSPCKECSKLIYQSGIKRVVYKEGYRDNEGLA 129 Query: 110 I 110 Sbjct: 130 F 130 >gi|114052458|ref|NP_001040508.1| DCMP deaminase [Bombyx mori] gi|95102556|gb|ABF51216.1| DCMP deaminase [Bombyx mori] Length = 189 Score = 73.8 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 31/119 (26%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-RNRELKD---------V 50 FM+ A A+ + P VGA V +NKI+ N D Sbjct: 29 EYFMAVAFLAAKRSKD----PKTQVGACIVNNDNKIVGIGYNGMPIGCNDDDFPWGKNTP 84 Query: 51 TA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE+ AI + + + +YV L PC CA I + I+++ Y Sbjct: 85 SPLDSKYLYVCHAEMNAILN----KNSADVKDCTIYVGLFPCNECAKMIIQSGIKKVVY 139 >gi|288921249|ref|ZP_06415533.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EUN1f] gi|288347339|gb|EFC81632.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EUN1f] Length = 150 Score = 73.8 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 32/112 (28%), Positives = 44/112 (39%), Gaps = 14/112 (12%) Query: 3 KGNVFMSCALEEAQNAA-LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ A+E A VGAV V NN+ I+ +R E+ D HAE A+ Sbjct: 5 DDHRWMTRAIELAHRCPPATGAYSVGAVIVDENNEEIAFGYSR--EVDDAV-HAEESAL- 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNP 105 L +Y TLEPC+ C I A I R+ P Sbjct: 61 -AKIAPDDPRLATATIYSTLEPCSQRRSRPRTCTQLILAAGIPRVVIAWREP 111 >gi|239616728|ref|YP_002940050.1| CMP/dCMP deaminase zinc-binding [Kosmotoga olearia TBF 19.5.1] gi|239505559|gb|ACR79046.1| CMP/dCMP deaminase zinc-binding [Kosmotoga olearia TBF 19.5.1] Length = 170 Score = 73.8 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 30/122 (24%) Query: 4 GNVFMSCA--LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN----------RELKDVT 51 + FMS A ++E +++ L + VGA+ V N+I++ N+ ++D Sbjct: 26 DSYFMSLAHLIKE-RSSCLHRK--VGAIIVRENRILATGYNQPPSGFPHCNEIECIRDAL 82 Query: 52 -------------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 AHAE A+ + +YVT +PC++CA I A I+R+ Sbjct: 83 SIQSGENQEICYAAHAEQNALSQAAKFGISTD--GATIYVTHKPCSICARLIINAGIKRV 140 Query: 99 YY 100 Y Sbjct: 141 VY 142 >gi|86134833|ref|ZP_01053415.1| Deoxycytidylate deaminase [Polaribacter sp. MED152] gi|85821696|gb|EAQ42843.1| Deoxycytidylate deaminase [Polaribacter sp. MED152] Length = 141 Score = 73.4 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 50/131 (38%), Gaps = 23/131 (17%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT- 51 +K ++ ALE + + + + VGA+ V + IIS N + T Sbjct: 7 LKYDKAYLRMALEWGKLSHCKRKQ-VGALIVKDRMIISDGFNGTPTGFDNCCEDENGATK 65 Query: 52 ---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPK 106 HAE AI LY+TL PCT C+ I A I+R+ Y +P Sbjct: 66 WEVLHAEANAILKVASSTQSA--KNATLYITLSPCTQCSKLIHQAGIKRVVYANAYKDP- 122 Query: 107 GGGIENGTQFY 117 +G F Sbjct: 123 -----SGLDFL 128 >gi|237715563|ref|ZP_04546044.1| deoxycytidylate deaminase [Bacteroides sp. D1] gi|262408572|ref|ZP_06085118.1| ComE operon protein 2 [Bacteroides sp. 2_1_22] gi|294647040|ref|ZP_06724653.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides ovatus SD CC 2a] gi|294809884|ref|ZP_06768560.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides xylanisolvens SD CC 1b] gi|229444272|gb|EEO50063.1| deoxycytidylate deaminase [Bacteroides sp. D1] gi|262353437|gb|EEZ02531.1| ComE operon protein 2 [Bacteroides sp. 2_1_22] gi|292637617|gb|EFF56022.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides ovatus SD CC 2a] gi|294442913|gb|EFG11704.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides xylanisolvens SD CC 1b] gi|295086823|emb|CBK68346.1| Deoxycytidylate deaminase [Bacteroides xylanisolvens XB1A] Length = 149 Score = 73.4 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 15/112 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT- 51 ++ ++ A A+N+ + VGA+ V + IIS N + ++T Sbjct: 8 LELDKRYIRMASIWAENSYCQRRK-VGALIVKDKMIISDGYNGTPSGFENVCEDENNLTK 66 Query: 52 ---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI R + +YVT PC CA I A I+R+ Y Sbjct: 67 PYVLHAEANAITKIARSNNSSD--GATMYVTASPCIECAKLIIQAGIKRVVY 116 >gi|58265894|ref|XP_570103.1| cytosine deaminase [Cryptococcus neoformans var. neoformans JEC21] gi|134110332|ref|XP_775993.1| hypothetical protein CNBD0430 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258661|gb|EAL21346.1| hypothetical protein CNBD0430 [Cryptococcus neoformans var. neoformans B-3501A] gi|56566313|gb|AAV98489.1| FCY1 [Cryptococcus neoformans var. neoformans] gi|57226336|gb|AAW42796.1| cytosine deaminase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 225 Score = 73.4 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 14/111 (12%) Query: 6 VFMSCALEEAQNAALRN--EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A EA A + P G V +++++ N+ + H EI AI Sbjct: 39 HWMRVA-NEAVYADGHPCPQAPFGTAIVNTTSDELVCVTSNKVGITGNPAMHGEISAITY 97 Query: 62 ------GCRILSQEILPE---VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 SQEIL LY EPC MCA+AI A + + YG S Sbjct: 98 CTEVLTAKGWTSQEILAGWKDFSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148 >gi|313665291|ref|YP_004047162.1| cytidine and deoxycytidylate deaminase zinc-binding region [Mycoplasma leachii PG50] gi|312949249|gb|ADR23845.1| cytidine and deoxycytidylate deaminase zinc-binding region [Mycoplasma leachii PG50] Length = 160 Score = 73.4 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 39/124 (31%), Positives = 52/124 (41%), Gaps = 33/124 (26%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN---RNRELKDVT------ 51 + FM A A + P VGA+ V +I++ N R D Sbjct: 12 HYFMLIAKASAMRSKD----PNTQVGAIVVNELQQIVATGYNGFPRGVSDDDFPWSKTNE 67 Query: 52 ----------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 AHAE+ AI + S+ L DLYVTL PC CA I A I+R+YY Sbjct: 68 DWLENKYAYVAHAELNAI-----VSSRSDLSNCDLYVTLFPCNECAKIIIQAGIKRIYY- 121 Query: 102 ASNP 105 A++P Sbjct: 122 ANDP 125 >gi|253583057|ref|ZP_04860275.1| deoxycytidylate deaminase [Fusobacterium varium ATCC 27725] gi|251835263|gb|EES63806.1| deoxycytidylate deaminase [Fusobacterium varium ATCC 27725] Length = 163 Score = 73.4 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 47/122 (38%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------- 42 ++ FM AL A+ + P VGA V + II N Sbjct: 7 IEWDEYFMGVALLSAKRSKD----PNTQVGACIVNEERRIIGVGYNGLPKGCSDDEFPWE 62 Query: 43 RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 R+ E D HAE+ AI + S + L LYV L PC C+ AI + I+ L Sbjct: 63 RDGEFLDTKYPFVCHAELNAI-----LNSTKTLKNCTLYVALFPCHECSKAIIQSGIKEL 117 Query: 99 YY 100 Y Sbjct: 118 VY 119 >gi|119961067|ref|YP_947578.1| riboflavin biosynthesis protein RibD [Arthrobacter aurescens TC1] gi|119947926|gb|ABM06837.1| riboflavin biosynthesis protein RibD [Arthrobacter aurescens TC1] Length = 373 Score = 73.4 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 59/153 (38%), Gaps = 23/153 (15%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A A R P VGAV + + + ++ +R TAHAE AI + Sbjct: 16 MDAALT-AALAGPRGANPLVGAVILSPDGEQLATGYHR----GAGTAHAEADAISEARKK 70 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + + VTLEPC CA AI A I ++ Y +P Sbjct: 71 --GIDIVGTTMVVTLEPCNHVGRTGPCAQAIIAAGIAKVIYAVDDPHDPAAGGARTLSAA 128 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 E+ G+ +++ + +D+F +R Sbjct: 129 -----GVEVISGLEGEKALDLNRDWFDAVAAKR 156 >gi|311898175|dbj|BAJ30583.1| putative diaminohydroxyphosphoribosylamino- pyrimidine deaminase [Kitasatospora setae KM-6054] Length = 153 Score = 73.4 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 51/152 (33%), Gaps = 30/152 (19%) Query: 4 GNVFMSCALEEAQN------AALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEI 56 +M A+E ++ A VGAV V + ++++ +R D HAE Sbjct: 9 DLRWMRRAIELSKRCPPSRTAFS-----VGAVIVGADGEVLAEGHSREV---DAVNHAEE 60 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPK-GG 108 A+ L +Y TLEPC CA I A + R+ P Sbjct: 61 AALGKLPA--GDPRLRAATVYSTLEPCGQRASRPHPCAELIVAAGVPRVVVAWREPSLFV 118 Query: 109 GIENGTQFYTLATCHHSPEIYP-GISEQRSRQ 139 GT T A E+ + +R Sbjct: 119 AACQGTALLTAAG----VEVIELPELAEEARA 146 >gi|254457747|ref|ZP_05071175.1| deoxycytidylate deaminase [Campylobacterales bacterium GD 1] gi|207086539|gb|EDZ63823.1| deoxycytidylate deaminase [Campylobacterales bacterium GD 1] Length = 147 Score = 73.4 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 46/124 (37%), Gaps = 29/124 (23%) Query: 1 MKKGNVFMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGNRN-----------RE 46 M F++ A E A + + VGAV V + +I+S N Sbjct: 1 MLSDQNFINIAQELATASKCVSKQ----VGAVIVKDGRILSTGYNGTPAGFTNCCDHWNG 56 Query: 47 LKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 HAE+ AI R + ++VTLEPC+ C+ + + I+R Sbjct: 57 EYTPDHHEWSKTYEIHAEMNAIIWAARKGIS--IEGASIFVTLEPCSECSKNLIASGIKR 114 Query: 98 LYYG 101 + Y Sbjct: 115 IVYA 118 >gi|328873884|gb|EGG22250.1| hypothetical protein DFA_04368 [Dictyostelium fasciculatum] Length = 328 Score = 73.4 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 10/99 (10%) Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 ++ AH E +AI + + LY T EPC MCA A+ A + + +G N Sbjct: 106 NMIAHGETVAINNCTALYGIKSFTNFTLYTTGEPCAMCAGALVWADFKTIVWGTFNRDLY 165 Query: 109 GIENGTQFYTLAT----------CHHSPEIYPGISEQRS 137 + ++ + +P + G+ +S Sbjct: 166 CKICMSNIPMDSSYIFARAFGLGANKAPRVIGGVLRAQS 204 >gi|189467913|ref|ZP_03016698.1| hypothetical protein BACINT_04305 [Bacteroides intestinalis DSM 17393] gi|189436177|gb|EDV05162.1| hypothetical protein BACINT_04305 [Bacteroides intestinalis DSM 17393] Length = 156 Score = 73.4 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Query: 26 VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N + +VT HAE AI R + Sbjct: 34 VGALIVKDKMIISDGYNGTPAGFENVCEDDNNVTKPYVLHAEANAITKIARSNNSSD--G 91 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 +YVT PC C+ I A I+R+ Y Sbjct: 92 ATMYVTASPCIECSKLIIQAGIKRVVY 118 >gi|153807590|ref|ZP_01960258.1| hypothetical protein BACCAC_01872 [Bacteroides caccae ATCC 43185] gi|149129952|gb|EDM21164.1| hypothetical protein BACCAC_01872 [Bacteroides caccae ATCC 43185] Length = 148 Score = 73.4 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 15/109 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 ++ A A+N+ + VGA+ V + IIS N + ++T Sbjct: 11 DKRYIRMASIWAENSYCQRRK-VGALIVKDKMIISDGYNGTPSGFENVCEDENNLTKPYV 69 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI R + +YVT PC CA I A I+R+ Y Sbjct: 70 LHAEANAITKIARSNNSSD--GATMYVTASPCIECAKLIIQAGIKRVVY 116 >gi|296123695|ref|YP_003631473.1| riboflavin biosynthesis protein RibD [Planctomyces limnophilus DSM 3776] gi|296016035|gb|ADG69274.1| riboflavin biosynthesis protein RibD [Planctomyces limnophilus DSM 3776] Length = 401 Score = 73.4 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 52/146 (35%), Gaps = 22/146 (15%) Query: 8 MSCALEEAQNA--ALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M AL A+ + VGAV V + +++ + + HAE+ A+ Sbjct: 10 MEYALMLARRGVGFVEPNPAVGAVVVDEHLQLLGEGWH--EKFGGP--HAEVHALAKAGE 65 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 +Y TLEPC CA A+ A IR + +P G + Sbjct: 66 KA-----RGATIYTTLEPCSHFGKTPPCADALIAAGIRHVETAVIDPAAHVSGQGIEKLR 120 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144 A + G ++R+++ F Sbjct: 121 QAG----ITVNVGRCADKARELLAPF 142 >gi|27468193|ref|NP_764830.1| putative dCMP deaminase [Staphylococcus epidermidis ATCC 12228] gi|57867051|ref|YP_188732.1| comE operon protein 2 [Staphylococcus epidermidis RP62A] gi|293366451|ref|ZP_06613128.1| ComE operon protein 2 [Staphylococcus epidermidis M23864:W2(grey)] gi|27315739|gb|AAO04874.1|AE016748_108 putative dCMP deaminase [Staphylococcus epidermidis ATCC 12228] gi|57637709|gb|AAW54497.1| comE operon protein 2 [Staphylococcus epidermidis RP62A] gi|291319220|gb|EFE59589.1| ComE operon protein 2 [Staphylococcus epidermidis M23864:W2(grey)] gi|329725366|gb|EGG61849.1| ComE operon protein 2 [Staphylococcus epidermidis VCU144] gi|329735176|gb|EGG71468.1| ComE operon protein 2 [Staphylococcus epidermidis VCU045] Length = 153 Score = 73.4 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 +K FM+ + A + + + VGA V +N+II+ N + Sbjct: 4 IKWEEYFMAQSHLLALRSTCKR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ + +YVT PC C +I A I+ +YY Sbjct: 63 GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKTIYYA 116 >gi|224538415|ref|ZP_03678954.1| hypothetical protein BACCELL_03309 [Bacteroides cellulosilyticus DSM 14838] gi|224519974|gb|EEF89079.1| hypothetical protein BACCELL_03309 [Bacteroides cellulosilyticus DSM 14838] Length = 153 Score = 73.4 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Query: 26 VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N + +VT HAE AI R + Sbjct: 34 VGALIVKDKMIISDGYNGTPAGFENVCEDDNNVTKPYVLHAEANAITKIARSNNSSD--G 91 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 +YVT PC C+ I A I+R+ Y Sbjct: 92 ATMYVTASPCIECSKLIIQAGIKRVVY 118 >gi|219113687|ref|XP_002186427.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209583277|gb|ACI65897.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 386 Score = 73.4 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 60/198 (30%), Gaps = 58/198 (29%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEIL 57 + F+ A+E A+ VG V V + ++ + + HAE+ Sbjct: 47 TEDEGFLRQAIECAKEGLGHTFPNPAVGCVLVNQEDGTVLGKGFHPRAGY----PHAEVF 102 Query: 58 AIRMGCRIL-----------------------------------SQEILPEVDL------ 76 A+ L E L E L Sbjct: 103 ALLQAAGHLEDGVAAGQAVVKKQNEQGAILNEVLRLSQQYTTDDGPEQLFEDTLAKSNVT 162 Query: 77 -YVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 YVTLEPC CA ++LA+ R+ G +P G + + ++ Sbjct: 163 AYVTLEPCSHYGKTPPCAVTLALAQASRVVVGFRDPNPKVDGGGVKLLREVGV--AVDMA 220 Query: 130 PGISEQRSRQIIQDFFKE 147 G + +++ +F K Sbjct: 221 EGALSEACAELVTNFVKR 238 >gi|86740605|ref|YP_481005.1| CMP/dCMP deaminase, zinc-binding [Frankia sp. CcI3] gi|86567467|gb|ABD11276.1| CMP/dCMP deaminase, zinc-binding [Frankia sp. CcI3] Length = 150 Score = 73.4 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 14/112 (12%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ A+E A VGAV V N + I+ +R D T HAE A+ Sbjct: 5 DDHRWMTRAIELAHRCPPATGAYSVGAVIVGENGEEIAFGFSREV---DDTVHAEESAL- 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNP 105 L +Y TLEPC+ C I A+I R+ P Sbjct: 61 -AKVAPDDPRLATATIYSTLEPCSQRMSWPRTCTQLILEAKIPRVVIAWREP 111 >gi|289434763|ref|YP_003464635.1| zinc-binding, ComEB family dCMP deaminase [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171007|emb|CBH27549.1| zinc-binding, ComEB family dCMP deaminase [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 176 Score = 73.4 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ AI + + Sbjct: 18 VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 77 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + +LYVT PC C +I A I+++Y+ Sbjct: 78 --QAELYVTHFPCLACTKSIIQAGIKKVYFA 106 >gi|134081301|emb|CAK41804.1| unnamed protein product [Aspergillus niger] Length = 259 Score = 73.4 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 52/178 (29%), Gaps = 52/178 (29%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + FM AL + A E PVG V V + KI+ N + +V Sbjct: 14 SEHAYFMKQALLMGEKALETGETPVGCVLVYDKKIVGFGMNDTNKSMNVV---------- 63 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR---------RLYYGASNPK----GG 108 + ++V EP A + + + RL G + G Sbjct: 64 -------PFKADQTVFVKSEP---IAGLLRVQDMPSLLPSKKCLRLILGQRCVRQTSMFG 113 Query: 109 GIENGTQFYTL-------------------ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G + + + S + G+ + + +++ F+ + Sbjct: 114 GTGSILSLHAEFVLAFPWTYTPDAKLIYASRSIDPSYPVQGGLFHKEAIMLLRRFYIQ 171 >gi|295099508|emb|CBK88597.1| Deoxycytidylate deaminase [Eubacterium cylindroides T2-87] Length = 164 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 33/130 (25%), Positives = 49/130 (37%), Gaps = 32/130 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRNRELKD----VTA 52 + FMS A A+ + P VGA V +++ N + D A Sbjct: 7 LSWDEYFMSMAHLSAKRSKD----PSTQVGACIVNSQKRVVGLGYNGFPKGCDDNEFPWA 62 Query: 53 --------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ AI + S + L +YV+L PC CA AI + I+ + Sbjct: 63 RDGEFLDTKYPYVVHAELNAI-----LNSIQDLNGCTIYVSLFPCNECAKAIIQSGIKCV 117 Query: 99 YYGASNPKGG 108 Y S+ G Sbjct: 118 VY-ESDKYAG 126 >gi|110598481|ref|ZP_01386752.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM 13031] gi|110339931|gb|EAT58435.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM 13031] Length = 177 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 55/152 (36%), Gaps = 32/152 (21%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42 FMS A ++ A +GAV V ++ I+S N Sbjct: 29 HEYFMSVAHLISRRATCTRGH-IGAVIVRDHNILSTGYNGAPSGLPHCNETTCRIYRSTH 87 Query: 43 ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 E T HAEI AI M + + E D+Y+T PC C + I+ +Y Sbjct: 88 PDGTVEENCVNTIHAEINAIAMAAKHGVS--IGEADIYITSSPCIHCLKVLINVGIKTIY 145 Query: 100 YGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 Y K IE+ + L+ ++ PG Sbjct: 146 Y----DKPYKIEHIDELLRLSGI-RLVQVSPG 172 >gi|294630170|ref|ZP_06708730.1| riboflavin/cytosine deaminase [Streptomyces sp. e14] gi|292833503|gb|EFF91852.1| riboflavin/cytosine deaminase [Streptomyces sp. e14] Length = 422 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 44/118 (37%), Gaps = 23/118 (19%) Query: 4 GNVFMSCALEEA------QNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEI 56 ++ A E A A VGAV V + ++R +R E D AHAE Sbjct: 274 DRHWLRIACELALLCPPSATAFS-----VGAVVVAADGTELARGHSR--EAGDPVAHAEE 326 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCT-------MCAAAISLARIRRLYYGASNPKG 107 A+ + LP +Y +LEPC CA I A +RR+ P Sbjct: 327 AAL--AKIDPADPRLPGATVYSSLEPCARRASRPRPCARLILDAGVRRVVTAWREPDT 382 >gi|121609770|ref|YP_997577.1| riboflavin biosynthesis protein RibD [Verminephrobacter eiseniae EF01-2] gi|121554410|gb|ABM58559.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Verminephrobacter eiseniae EF01-2] Length = 371 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 57/150 (38%), Gaps = 20/150 (13%) Query: 10 CALEEAQNAALRNEI-P-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 AL+ A R P VG V +I R AHAEI+A+R Sbjct: 11 EALDLAHQGLYRTSPNPRVGCVIADAAGVVIGRGSTGPAGG----AHAEIMALRNAAA-- 64 Query: 67 SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + YVTLEPC+ C A+ A I ++ ++P G F L Sbjct: 65 GGHSVRGATAYVTLEPCSHHGRTGPCCDALVAAGIAKVVASLTDPNPLVAGQG--FARLR 122 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF-KERR 149 + ++ PG Q +R++ FF + R Sbjct: 123 AAGVAVQVGPG--AQAARELNVGFFSRMLR 150 >gi|304384459|ref|ZP_07366862.1| competence protein ComEB [Prevotella marshii DSM 16973] gi|304334453|gb|EFM00743.1| competence protein ComEB [Prevotella marshii DSM 16973] Length = 147 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 ++ A A+N+ + VGA+ V + IIS N + + T Sbjct: 11 DLRYLRMARIWAENSYCQRRK-VGALVVKDKMIISDGYNGTPSGFENICEDEDNTTKPYV 69 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC C+ I A I+R+ Y Sbjct: 70 LHAEANAITKLARSSNNSD--NSTLYVTASPCIECSKLIIQAGIKRVVYA 117 >gi|319953260|ref|YP_004164527.1| cmp/dcmp deaminase zinc-binding protein [Cellulophaga algicola DSM 14237] gi|319421920|gb|ADV49029.1| CMP/dCMP deaminase zinc-binding protein [Cellulophaga algicola DSM 14237] Length = 146 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 38/147 (25%), Positives = 55/147 (37%), Gaps = 25/147 (17%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-----RELKDV------ 50 K ++ A E + + + + VGA+ V + IIS N + +D Sbjct: 8 KYDKAYLRMASEWGKLSFCKRKQ-VGAIIVKDRMIISDGYNGTPTGFENQCEDGDGYTKW 66 Query: 51 -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKG 107 HAE AI LY+TL PC C+ I + I+R+ Y G + Sbjct: 67 YVLHAEANAISKVAASTQS--CNGATLYITLSPCKECSKLIHQSGIKRVVYQNGYKDD-- 122 Query: 108 GGIENGTQFYTLAT--CHHSPEIYPGI 132 +G QF A H PEI I Sbjct: 123 ----SGLQFLQKAGVELVHLPEIKENI 145 >gi|242242866|ref|ZP_04797311.1| competence protein ComEB [Staphylococcus epidermidis W23144] gi|242233679|gb|EES35991.1| competence protein ComEB [Staphylococcus epidermidis W23144] gi|319400925|gb|EFV89144.1| comE operon protein 2 [Staphylococcus epidermidis FRI909] Length = 153 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 +K FM+ + A + R + VGA V +N+II+ N + Sbjct: 4 IKWEEYFMAQSHLLALRSTCRR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ + +YVT PC C +I A I+ +YY Sbjct: 63 GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKTIYYA 116 >gi|237737703|ref|ZP_04568184.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium mortiferum ATCC 9817] gi|229419583|gb|EEO34630.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacterium mortiferum ATCC 9817] Length = 358 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 52/166 (31%), Gaps = 51/166 (30%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-----------------RNRE 46 +M+ ALE A A + N Sbjct: 2 DKKYMARALELA--ALGEGSV-----------------NPNPLVGAVVVKDGVVVGEGYH 42 Query: 47 LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYY 100 K HAE+ A+ M D+YVTLEPC CA I I+R Sbjct: 43 KKYGGPHAEVFALEMAGEKAY-----GADIYVTLEPCSHYGKTPPCAKKIIEMGIKRCIV 97 Query: 101 GASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 + +P G + A E+ G+ E+ ++++ + F K Sbjct: 98 ASLDPNPLVSGRGIKMLQDAG----IEVVTGVMEREAKELNRVFMK 139 >gi|332829184|gb|EGK01848.1| hypothetical protein HMPREF9455_01996 [Dysgonomonas gadei ATCC BAA-286] Length = 147 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 31/109 (28%), Positives = 41/109 (37%), Gaps = 15/109 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN------------RELKDVT 51 +M A A+N+ VGA+ V + IIS N E K Sbjct: 10 DERYMRMAAIWAENSYCVRRK-VGALIVKDKMIISDGYNGTPAGFENICEDENNETKPYV 68 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI + + +YVT PC CA I A I+R+ Y Sbjct: 69 LHAEANAITKVACSHNSSM--GATMYVTTSPCIECAKLIIQAGIKRVVY 115 >gi|153005122|ref|YP_001379447.1| CMP/dCMP deaminase [Anaeromyxobacter sp. Fw109-5] gi|152028695|gb|ABS26463.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter sp. Fw109-5] Length = 164 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 39/113 (34%), Gaps = 18/113 (15%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---------------LK 48 FM+ A A A + VGAV V + I+S N + Sbjct: 8 DEYFMNVARVVASRATCDRKH-VGAVLVRDKTILSTGYNGSIRGLPHCSEAGHMMEDGHC 66 Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE AI + + +Y T PC C I A RR+ +G Sbjct: 67 VATVHAEANAIIQAAKNGVA--IDGATIYTTASPCWPCFKLIGNAGCRRIVFG 117 >gi|298291639|ref|YP_003693578.1| riboflavin biosynthesis protein RibD [Starkeya novella DSM 506] gi|296928150|gb|ADH88959.1| riboflavin biosynthesis protein RibD [Starkeya novella DSM 506] Length = 370 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 45/147 (30%), Gaps = 25/147 (17%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNK----IISRAGNRNRELKDVTAHAEIL 57 M+ AL + VGA+ V ++ R K HAE Sbjct: 7 DEALMAAALSVGRRELGHTWPNPAVGALVVRETGGAPVVLGRGW----TSKGGRPHAEPQ 62 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ E LYVTLEPC C A+ + + R+ +P Sbjct: 63 ALAQAG-----EGARGATLYVTLEPCSHHGLTPPCVDAVRASGVARVVAAIEDPDFRVAG 117 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSR 138 G A ++ G+ +R Sbjct: 118 RGFSLLREAG----IDVEVGVGAPEAR 140 >gi|41407234|ref|NP_960070.1| RibG [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395585|gb|AAS03453.1| RibG [Mycobacterium avium subsp. paratuberculosis K-10] Length = 341 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 53/151 (35%), Gaps = 22/151 (14%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+E++ PVGAV + + G D HAEILA+R + Sbjct: 13 MHLAIEQSNQVKGNTYPNPPVGAVVLDGRGEVVGVGGTEPAGGD---HAEILALRRAGDL 69 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + VTLEPC C A+ A + + Y ++P + Sbjct: 70 A-----AGGTVVVTLEPCNHHGKTPPCVDALLEAGVGTVVYAVADPNPQAAGGAGRLQEA 124 Query: 120 ATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149 + G+ S ++++ ++R Sbjct: 125 -----GVTVRSGLLADEVSGGPLREWLHKQR 150 >gi|313894732|ref|ZP_07828293.1| cytidine and deoxycytidylate deaminase zinc-binding region [Selenomonas sp. oral taxon 137 str. F0430] gi|320531057|ref|ZP_08032086.1| cytidine and deoxycytidylate deaminase zinc-binding region [Selenomonas artemidis F0399] gi|312976641|gb|EFR42095.1| cytidine and deoxycytidylate deaminase zinc-binding region [Selenomonas sp. oral taxon 137 str. F0430] gi|320136639|gb|EFW28592.1| cytidine and deoxycytidylate deaminase zinc-binding region [Selenomonas artemidis F0399] Length = 159 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 40/122 (32%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-RNRELKDV----- 50 + FM A+ A + P VGA V +K I+ N D Sbjct: 3 ITWDEYFMGIAIFSAYRSKD----PHTQVGACIVNEDKHIVGVGYNGMPNGCDDSEYPWG 58 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ AI L +YV+L PC C AI + IR + Sbjct: 59 RTGEFADQKYPYVVHAELNAILNA-----STSLKGCRIYVSLFPCNECCKAIIQSGIREV 113 Query: 99 YY 100 Y Sbjct: 114 VY 115 >gi|145594417|ref|YP_001158714.1| riboflavin biosynthesis protein RibD [Salinispora tropica CNB-440] gi|145303754|gb|ABP54336.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Salinispora tropica CNB-440] Length = 353 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 43/142 (30%), Gaps = 25/142 (17%) Query: 8 MSCALEEAQNAALR---NEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A++ A N + VG V + +++ + HAEI+A+ Sbjct: 10 MRRAVDLAARGLGTTSPNPV-VGCVLLDPGGQVVGEGFHAYAGG----PHAEIVALAHAG 64 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 E VTLEPC C+ A+ A + R+ +P Sbjct: 65 -----ERARGGTAVVTLEPCDHTGRTGPCSTALVQAGVARVVIAVPDPNQAASGGAATLR 119 Query: 118 TLATCHHSPEIYPGISEQRSRQ 139 + G+ + Sbjct: 120 AA-----GVRVDLGVRAAEAEA 136 >gi|157123926|ref|XP_001653977.1| cytidine and deoxycytidylate deaminase zinc-binding region [Aedes aegypti] gi|108882879|gb|EAT47104.1| cytidine and deoxycytidylate deaminase zinc-binding region [Aedes aegypti] Length = 387 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 7/87 (8%) Query: 43 RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 + L D++ H + LA + D+Y+T EPC MCA A++ +R+RR++Y Sbjct: 305 ESISLDDISPHEDNLA------KYGPYLCTGYDVYLTHEPCIMCAMALTHSRVRRVFYHF 358 Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIY 129 + K GG+ + T+ + +H E++ Sbjct: 359 NTAK-GGLGSITKVHCAKGLNHHYEVF 384 >gi|332523517|ref|ZP_08399769.1| putative ComE operon protein 2 [Streptococcus porcinus str. Jelinkova 176] gi|332314781|gb|EGJ27766.1| putative ComE operon protein 2 [Streptococcus porcinus str. Jelinkova 176] Length = 152 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V +N+II+ N D T HAE+ A+ + Sbjct: 29 VGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEDGHCIRTVHAEMNALIQCAKEGISTD 88 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 +LYVT PC C A+ A I+++ Y Sbjct: 89 --GTELYVTHFPCINCTKALLQAGIKKITY 116 >gi|89897671|ref|YP_521158.1| hypothetical protein DSY4925 [Desulfitobacterium hafniense Y51] gi|219670820|ref|YP_002461255.1| CMP/dCMP deaminase zinc-binding [Desulfitobacterium hafniense DCB-2] gi|89337119|dbj|BAE86714.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219541080|gb|ACL22819.1| CMP/dCMP deaminase zinc-binding [Desulfitobacterium hafniense DCB-2] Length = 155 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 48/133 (36%), Gaps = 30/133 (22%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNREL 47 FM A A + R VGAV V + +I+S N ++L Sbjct: 10 DEYFMQMAQVVAGRSTCLRRQ---VGAVIVKDKQILSTGYNGSPTGLSHCAQKGCLRQQL 66 Query: 48 KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + HAE A+ + + D+Y T +PC +C + A I+R+ Sbjct: 67 GIPSGERTEICRAVHAEQNALVQAAKHGVS--INGADIYTTFQPCVLCTKLLINAGIKRV 124 Query: 99 YYGASNPKGGGIE 111 ++ P +E Sbjct: 125 FFLYPYPDSLALE 137 >gi|315282387|ref|ZP_07870809.1| ComE operon protein 2 [Listeria marthii FSL S4-120] gi|313613969|gb|EFR87691.1| ComE operon protein 2 [Listeria marthii FSL S4-120] Length = 186 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ AI + + Sbjct: 28 VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 +LYVT PC C +I A I+++Y+ Sbjct: 88 --NAELYVTHFPCLACTKSIIQAGIKKVYFA 116 >gi|270294283|ref|ZP_06200485.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270275750|gb|EFA21610.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 152 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Query: 26 VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N + +VT HAE AI R + Sbjct: 34 VGALIVKDKMIISDGYNGTPSGFENVCEDENNVTKPYVLHAEANAITKIARSNNSSN--G 91 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 +YVT PC C+ I A I+R+ Y Sbjct: 92 ATMYVTASPCIECSKLIIQAGIKRVVY 118 >gi|223044386|ref|ZP_03614420.1| ComE operon protein 2 [Staphylococcus capitis SK14] gi|222442255|gb|EEE48366.1| ComE operon protein 2 [Staphylococcus capitis SK14] Length = 153 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 +K FM+ + A + + + VGA V +N+II+ N + Sbjct: 4 IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ + +YVT PC C +I A I+ +YY Sbjct: 63 GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKTIYYA 116 >gi|292669313|ref|ZP_06602739.1| deoxycytidylate deaminase [Selenomonas noxia ATCC 43541] gi|292649154|gb|EFF67126.1| deoxycytidylate deaminase [Selenomonas noxia ATCC 43541] Length = 158 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 40/122 (32%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-RNRELKDVTA--- 52 + FM A+ A + P VGA V +K I+ N D Sbjct: 3 ISWDEYFMGVAIFSAYRSKD----PHTQVGACIVNEDKHIVGVGYNGMPNGCDDSVYPWG 58 Query: 53 --------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ AI L +YV+L PC C AI + IR + Sbjct: 59 RTGDFADQKYPYVVHAELNAILNA-----STSLKGCRIYVSLFPCNECCKAIIQSGIREV 113 Query: 99 YY 100 Y Sbjct: 114 VY 115 >gi|326502140|dbj|BAK06562.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 418 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 31/58 (53%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 D+Y+ EPCTMCA A+ R +R++Y NP G + + + + + +H ++ Sbjct: 335 TGFDIYLVWEPCTMCAMALVHQRFKRVFYAFPNPVTGALGSVYRLHGKKSLNHHYSVF 392 >gi|251811005|ref|ZP_04825478.1| competence protein ComEB [Staphylococcus epidermidis BCM-HMP0060] gi|251805515|gb|EES58172.1| competence protein ComEB [Staphylococcus epidermidis BCM-HMP0060] gi|329737260|gb|EGG73514.1| ComE operon protein 2 [Staphylococcus epidermidis VCU028] Length = 153 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 +K FM+ + A + + + VGA V +N+II+ N + Sbjct: 4 IKWEEYFMAQSHLLALRSTCKR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ + +YVT PC C +I A I+ +YY Sbjct: 63 GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKTIYYA 116 >gi|262197671|ref|YP_003268880.1| CMP/dCMP deaminase zinc-binding protein [Haliangium ochraceum DSM 14365] gi|262081018|gb|ACY16987.1| CMP/dCMP deaminase zinc-binding protein [Haliangium ochraceum DSM 14365] Length = 153 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 18/113 (15%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---------------LK 48 FMS AL A + + VGAV V + I+S N + Sbjct: 13 DEYFMSIALVVATRSTCHRKY-VGAVIVRDRTILSTGYNGSIRGMPHCTDVGHMMEGGHC 71 Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ AI + + ++ + LYVT PC C + A I R+ Y Sbjct: 72 VATIHAEVNAIIQAAK--NGVVIDKATLYVTASPCWNCFKQAANAGIERICYA 122 >gi|313608725|gb|EFR84550.1| ComE operon protein 2 [Listeria monocytogenes FSL F2-208] Length = 186 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ AI + + Sbjct: 28 VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + +LYVT PC C +I A I+++Y+ Sbjct: 88 --KAELYVTHFPCLACTKSIIQAGIKKVYFA 116 >gi|189346358|ref|YP_001942887.1| CMP/dCMP deaminase zinc-binding [Chlorobium limicola DSM 245] gi|189340505|gb|ACD89908.1| CMP/dCMP deaminase zinc-binding [Chlorobium limicola DSM 245] Length = 174 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 44/121 (36%), Gaps = 27/121 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------RNRELK-------- 48 FMS A ++ A +GAV V ++ I+S N E Sbjct: 29 HEYFMSVAHLISRRATCTRGH-IGAVIVRDHNILSTGYNGAPSGLPHCNETNCRIYRSTH 87 Query: 49 -DVTA--------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 D T HAEI AI + + + D+Y+T PC C + I+ +Y Sbjct: 88 PDGTIEENCVNTIHAEINAIAQAAKHGVS--IKDADIYITASPCIHCLKVLINVGIKTIY 145 Query: 100 Y 100 Y Sbjct: 146 Y 146 >gi|329962142|ref|ZP_08300153.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides fluxus YIT 12057] gi|328530790|gb|EGF57648.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides fluxus YIT 12057] Length = 146 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Query: 26 VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N + +VT HAE AI R + Sbjct: 34 VGALIVKDQMIISDGYNGTPAGFENICEDENNVTKPYVLHAEANAITKIARSNNSSD--G 91 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 +YVT PC CA I A I+R+ Y Sbjct: 92 ATMYVTASPCIECAKLIIQAGIKRVVY 118 >gi|138896089|ref|YP_001126542.1| late competence protein ComEB [Geobacillus thermodenitrificans NG80-2] gi|196248983|ref|ZP_03147683.1| ComE operon protein 2 [Geobacillus sp. G11MC16] gi|134267602|gb|ABO67797.1| Late competence protein ComEB [Geobacillus thermodenitrificans NG80-2] gi|196211859|gb|EDY06618.1| ComE operon protein 2 [Geobacillus sp. G11MC16] Length = 155 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------D 49 M FM+ + A + + VGA V + +II+ N + D Sbjct: 4 MTWDQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGAHCIDEGCYVID 62 Query: 50 V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ AI + ++YVT PC C AI + IR +YY Sbjct: 63 GHCVRTIHAEMNAILQCAKFGVPT--EGAEMYVTHFPCLHCCKAIIQSGIRAVYYA 116 >gi|241950489|ref|XP_002417967.1| deoxycytidylate deaminase (dCMP deaminase), putative [Candida dubliniensis CD36] gi|223641305|emb|CAX45685.1| deoxycytidylate deaminase (dCMP deaminase), putative [Candida dubliniensis CD36] Length = 337 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 31/123 (25%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGN---RNRELKD--------- 49 + FM A + A A N + VG V V N++I+ N R+ + Sbjct: 189 DSYFMRLA-DLA--ALRSNCMKRRVGCVIVRENRVIATGYNGTPRHLTNCNEGGCSRCNK 245 Query: 50 --------VT---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 T HAE A+ R I E LY PC C+ I + I+ + Sbjct: 246 GQGSGALLATCLCLHAEENALLEAGR---DRIRGESVLYCNTCPCLTCSIKIVQSGIKEV 302 Query: 99 YYG 101 Y Sbjct: 303 VYA 305 >gi|257064835|ref|YP_003144507.1| deoxycytidylate deaminase [Slackia heliotrinireducens DSM 20476] gi|256792488|gb|ACV23158.1| deoxycytidylate deaminase [Slackia heliotrinireducens DSM 20476] Length = 156 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 45/127 (35%), Gaps = 28/127 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 FM A E ++ + VGAV V + +I++ N ++L Sbjct: 13 DEYFMHLAFEVSKRSTCLR-RAVGAVIVKDRRILATGYNGVPSGLRHCDETGCLRQQLNV 71 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE AI R + +Y+T +PC +C + A I + Y Sbjct: 72 PSGQRHEICRGLHAEQNAIIQAARY--GIDIAGSSIYITTQPCVVCTKMLINAGITEVVY 129 Query: 101 --GASNP 105 G + Sbjct: 130 AEGYPDE 136 >gi|313633202|gb|EFS00080.1| ComE operon protein 2 [Listeria seeligeri FSL N1-067] gi|313637784|gb|EFS03135.1| ComE operon protein 2 [Listeria seeligeri FSL S4-171] Length = 186 Score = 72.6 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ AI + + Sbjct: 28 VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + +LYVT PC C +I A I+++Y+ Sbjct: 88 --QAELYVTHFPCLACTKSIIQAGIKKVYFA 116 >gi|242373893|ref|ZP_04819467.1| competence protein ComEB [Staphylococcus epidermidis M23864:W1] gi|242348447|gb|EES40049.1| competence protein ComEB [Staphylococcus epidermidis M23864:W1] Length = 153 Score = 72.6 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 +K FM+ + A + + + VGA V +N+II+ N + Sbjct: 4 IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ + +YVT PC C +I A I+ +YY Sbjct: 63 GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKTIYYA 116 >gi|157738249|ref|YP_001490933.1| bifunctional riboflavin biosynthesis protein RibD [Arcobacter butzleri RM4018] gi|157700103|gb|ABV68263.1| bifunctional riboflavin biosynthesis protein RibD [Arcobacter butzleri RM4018] Length = 334 Score = 72.6 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 53/150 (35%), Gaps = 40/150 (26%) Query: 1 MK-KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEI 56 MK N +M A++EA L VG V V N ++++ A +E HAE+ Sbjct: 1 MKIDDNFYMRLAIDEAWKHQLLTYPNPAVGCVIVKNQRLLAVEAH---KEAGMP--HAEV 55 Query: 57 LAIRMGCRIL----------------------SQEILPEVDLYVTLEPC------TMCAA 88 A++ + ++YVTLEPC CA Sbjct: 56 NALKTAYLKDNPNSILKTKNSSFDIHQFLLQNHNGFFNDCEIYVTLEPCNHIGKTPSCAN 115 Query: 89 AISLARIRRLYYGASNPK---GGGIENGTQ 115 + + +R+ +P GG+E Sbjct: 116 LLKELKPKRVIISVKDPNKQATGGLETLRN 145 >gi|148264239|ref|YP_001230945.1| dCMP deaminase [Geobacter uraniireducens Rf4] gi|146397739|gb|ABQ26372.1| dCMP deaminase [Geobacter uraniireducens Rf4] Length = 156 Score = 72.6 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 44/128 (34%), Gaps = 32/128 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNREL 47 FM A+ + R VGAV V + I++ N +L Sbjct: 7 DEYFMEITHLVAKRSTCLRRQ---VGAVIVKDKNILATGYNGAPSGVSHCLDVGCLREKL 63 Query: 48 KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + HAE AI + + + LY T PC +C+ + A I+R+ Sbjct: 64 NIPSGERHELCRGLHAEQNAIIQAAKHGTT--IDGSTLYCTTLPCIICSKMVINAGIKRI 121 Query: 99 YY--GASN 104 Y G + Sbjct: 122 VYEVGYPD 129 >gi|320528437|ref|ZP_08029599.1| cytidine and deoxycytidylate deaminase zinc-binding region [Solobacterium moorei F0204] gi|320131351|gb|EFW23919.1| cytidine and deoxycytidylate deaminase zinc-binding region [Solobacterium moorei F0204] Length = 164 Score = 72.6 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 33/136 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNN-KIISRAGN-------------- 42 + FM A A + P VGA V +N +++S N Sbjct: 8 LSWDEYFMGLAHLSALRSKD----PNTKVGAAIVDDNHRVVSVGYNGFPKGCSDEVFPWG 63 Query: 43 RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 R+ + D HAE+ AI + S+ + +YV+L PC CA AI + I R+ Sbjct: 64 RDGDTLDSKYAFVVHAELNAI-----LNSKWPVVGCTIYVSLFPCNECAKAIIQSGIHRI 118 Query: 99 YYGASNPKGGGIENGT 114 Y + K G++ Sbjct: 119 VY--ESDKYNGVDTNI 132 >gi|325104661|ref|YP_004274315.1| CMP/dCMP deaminase zinc-binding protein [Pedobacter saltans DSM 12145] gi|324973509|gb|ADY52493.1| CMP/dCMP deaminase zinc-binding protein [Pedobacter saltans DSM 12145] Length = 157 Score = 72.6 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 23/117 (19%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-----------------RNRE 46 +FM+ A + AQ + VGAV + +IIS N R+ Sbjct: 6 DQIFMNLASDLAQKSHCVKNH-VGAVLTKDTRIISIGYNGPPAGTHNCDEEWPEEGCPRD 64 Query: 47 LKDVTA---HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 K+ + HAE AI + +Q + LY TL PC CA I + I+R++Y Sbjct: 65 SKNSCSLALHAEENAILYAVKNGAQ--IQGATLYTTLSPCISCARLIYASGIQRVFY 119 >gi|160890970|ref|ZP_02071973.1| hypothetical protein BACUNI_03415 [Bacteroides uniformis ATCC 8492] gi|317481497|ref|ZP_07940562.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides sp. 4_1_36] gi|156859191|gb|EDO52622.1| hypothetical protein BACUNI_03415 [Bacteroides uniformis ATCC 8492] gi|316902343|gb|EFV24232.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides sp. 4_1_36] Length = 153 Score = 72.6 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Query: 26 VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N + +VT HAE AI R + Sbjct: 35 VGALIVKDKMIISDGYNGTPSGFENVCEDENNVTKPYVLHAEANAITKIARSNNSSN--G 92 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 +YVT PC C+ I A I+R+ Y Sbjct: 93 ATMYVTASPCIECSKLIIQAGIKRVVY 119 >gi|150024567|ref|YP_001295393.1| dCMP deaminase [Flavobacterium psychrophilum JIP02/86] gi|149771108|emb|CAL42575.1| dCMP deaminase [Flavobacterium psychrophilum JIP02/86] Length = 142 Score = 72.6 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 15/111 (13%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDVTA-- 52 K ++ A E ++ + + VGA+ V + IIS N E +D T Sbjct: 8 KYDKAYLRLAKEWSKLSYCNRKQ-VGAIIVRDKMIISDGYNGSPSGFENCCEEQDGTTKW 66 Query: 53 ---HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI R LY+TL PC C+ I + I+R+ Y Sbjct: 67 YILHAEANAILKVARSTQS--CEGATLYITLSPCKECSKLIHQSGIKRVVY 115 >gi|159044799|ref|YP_001533593.1| riboflavin biosynthesis protein [Dinoroseobacter shibae DFL 12] gi|157912559|gb|ABV93992.1| riboflavin biosynthesis protein [Dinoroseobacter shibae DFL 12] Length = 365 Score = 72.6 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 49/148 (33%), Gaps = 22/148 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEIL 57 M +M AL + ++ VG V V N +++ R R + HAE++ Sbjct: 1 MSDDLRWMQVALTLGRRGLGQSWPNPAVGCVLVAPNGRVVGRG--RTQSGGRP--HAEVV 56 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 + YVTLEPC C A+ A + R+ +P Sbjct: 57 -----ALAQAGAAARGATAYVTLEPCAHHGQTGPCCDALIAAGVGRVVTALEDPDPRVAG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQ 139 G A + G+ +R+ Sbjct: 112 QGHSRLRAAG----VAVTEGVGRAAARE 135 >gi|330686098|gb|EGG97719.1| ComE operon protein 2 [Staphylococcus epidermidis VCU121] Length = 153 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 +K FM+ + A + + + VGA V +N+II+ N + Sbjct: 4 IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ + +YVT PC C +I A I+ +YY Sbjct: 63 GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKTIYYA 116 >gi|284801870|ref|YP_003413735.1| hypothetical protein LM5578_1625 [Listeria monocytogenes 08-5578] gi|284995012|ref|YP_003416780.1| hypothetical protein LM5923_1577 [Listeria monocytogenes 08-5923] gi|284057432|gb|ADB68373.1| hypothetical protein LM5578_1625 [Listeria monocytogenes 08-5578] gi|284060479|gb|ADB71418.1| hypothetical protein LM5923_1577 [Listeria monocytogenes 08-5923] Length = 186 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ AI + + Sbjct: 28 VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + +LYVT PC C +I A I+++Y+ Sbjct: 88 --KAELYVTHFPCLACTKSIIQAGIKKVYFA 116 >gi|239637600|ref|ZP_04678572.1| ComE operon protein 2 [Staphylococcus warneri L37603] gi|239596818|gb|EEQ79343.1| ComE operon protein 2 [Staphylococcus warneri L37603] Length = 153 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 +K FM+ + A + + + VGA V +N+II+ N + Sbjct: 4 IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ + +YVT PC C +I A I+ +YY Sbjct: 63 GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKTIYYA 116 >gi|154491043|ref|ZP_02030984.1| hypothetical protein PARMER_00962 [Parabacteroides merdae ATCC 43184] gi|154088791|gb|EDN87835.1| hypothetical protein PARMER_00962 [Parabacteroides merdae ATCC 43184] Length = 144 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 15/112 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT- 51 ++ ++ A A+N+ + VGA+ V + IIS N + +VT Sbjct: 9 LELDKRYLRMAAVWAENSYCKR-RQVGALIVKDQMIISDGYNGTPSGFENVCEDEHNVTK 67 Query: 52 ---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI + +YVT PC CA I + I+R+ Y Sbjct: 68 PYVLHAEANAITKVAASSNSS--KGATIYVTSAPCIECAKLIIQSGIKRVVY 117 >gi|314933760|ref|ZP_07841125.1| ComE operon protein 2 [Staphylococcus caprae C87] gi|313653910|gb|EFS17667.1| ComE operon protein 2 [Staphylococcus caprae C87] Length = 153 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 +K FM+ + A + + + VGA V +N+II+ N + Sbjct: 4 IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ + +YVT PC C +I + I+ +YY Sbjct: 63 GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQSGIKTIYYA 116 >gi|315303230|ref|ZP_07873879.1| ComE operon protein 2 [Listeria ivanovii FSL F6-596] gi|313628400|gb|EFR96884.1| ComE operon protein 2 [Listeria ivanovii FSL F6-596] Length = 186 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ AI + + Sbjct: 28 VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + +LYVT PC C +I A I+++Y+ Sbjct: 88 --QAELYVTHFPCLACTKSIIQAGIKKVYFA 116 >gi|289807927|ref|ZP_06538556.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 48 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 25/48 (52%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 LYVTLEPC MCA A+ +RI R+ +GA + K G + Sbjct: 1 TTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPG 48 >gi|326506166|dbj|BAJ86401.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 270 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 31/58 (53%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 D+Y+ EPCTMCA A+ R +R++Y NP G + + + + + +H ++ Sbjct: 187 TGFDIYLVWEPCTMCAMALVHQRFKRVFYAFPNPVTGALGSVYRLHGKKSLNHHYSVF 244 >gi|110633489|ref|YP_673697.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Mesorhizobium sp. BNC1] gi|110284473|gb|ABG62532.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Chelativorans sp. BNC1] Length = 370 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 49/140 (35%), Gaps = 25/140 (17%) Query: 4 GNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNK----IISRAGNRNRELKDVTAHAEIL 57 FM+ A+ ++ L P VG + V ++ I+ RA HAE Sbjct: 10 DRRFMAAAVRLSRRHLGLTGANPSVGCLIVRDDGEGPYIVGRA----VTAIGGRPHAESQ 65 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ + YVTLEPC C+ A+ A + R+ AS+P Sbjct: 66 ALEEAGELA-----RGATAYVTLEPCAHHGRTPPCSLALIAAGVARVVGAASDPDLRVSG 120 Query: 112 NGTQFYTLATCHHSPEIYPG 131 G A E+ G Sbjct: 121 KGYSMLRAAG----IEVVEG 136 >gi|16803523|ref|NP_465008.1| hypothetical protein lmo1483 [Listeria monocytogenes EGD-e] gi|47095436|ref|ZP_00233046.1| comE operon protein 2 [Listeria monocytogenes str. 1/2a F6854] gi|254827771|ref|ZP_05232458.1| comEB [Listeria monocytogenes FSL N3-165] gi|254829758|ref|ZP_05234413.1| hypothetical protein Lmon1_00315 [Listeria monocytogenes 10403S] gi|254898351|ref|ZP_05258275.1| hypothetical protein LmonJ_01010 [Listeria monocytogenes J0161] gi|254912157|ref|ZP_05262169.1| comE operon protein 2 [Listeria monocytogenes J2818] gi|254936485|ref|ZP_05268182.1| comEB [Listeria monocytogenes F6900] gi|290893844|ref|ZP_06556822.1| comEB [Listeria monocytogenes FSL J2-071] gi|16410912|emb|CAC99561.1| comEB [Listeria monocytogenes EGD-e] gi|47016257|gb|EAL07180.1| comE operon protein 2 [Listeria monocytogenes str. 1/2a F6854] gi|258600151|gb|EEW13476.1| comEB [Listeria monocytogenes FSL N3-165] gi|258609078|gb|EEW21686.1| comEB [Listeria monocytogenes F6900] gi|290556561|gb|EFD90097.1| comEB [Listeria monocytogenes FSL J2-071] gi|293590129|gb|EFF98463.1| comE operon protein 2 [Listeria monocytogenes J2818] Length = 186 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ AI + + Sbjct: 28 VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + +LYVT PC C +I A I+++Y+ Sbjct: 88 --KAELYVTHFPCLACTKSIIQAGIKKVYFA 116 >gi|170750355|ref|YP_001756615.1| riboflavin biosynthesis protein RibD [Methylobacterium radiotolerans JCM 2831] gi|170656877|gb|ACB25932.1| riboflavin biosynthesis protein RibD [Methylobacterium radiotolerans JCM 2831] Length = 369 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 45/149 (30%), Gaps = 23/149 (15%) Query: 1 MKKGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNN--KIISRAGNRNRELKDVTAHAEI 56 M FM AL + P VGAV V +I+ A + H E Sbjct: 1 MSGDANFMRLALALGRRGLGTTWPNPSVGAVVVEPGTGRILGTAA----TAQGGRPHGEP 56 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110 + + E LYVTLEPC C AI A I R+ +P Sbjct: 57 V-----ALAAAGEAARGATLYVTLEPCSHHGRTPPCTDAILAAGIARVVSALEDPDPRVA 111 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 G + G+ + + Sbjct: 112 GRGHDLLRRGG----VAVETGLMRDEAAR 136 >gi|329957030|ref|ZP_08297598.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides clarus YIT 12056] gi|328523787|gb|EGF50879.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides clarus YIT 12056] Length = 145 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Query: 26 VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N + +VT HAE AI R + Sbjct: 34 VGALIVKDKMIISDGYNGTPSGFENVCEDENNVTKPYVLHAEANAITKIARSNNSSN--G 91 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 +YVT PC CA I A I+R+ Y Sbjct: 92 ATMYVTASPCIECAKLIIQAGIKRVVY 118 >gi|303237263|ref|ZP_07323833.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella disiens FB035-09AN] gi|302482650|gb|EFL45675.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella disiens FB035-09AN] Length = 148 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 34/88 (38%), Gaps = 14/88 (15%) Query: 26 VGAVAVLNNKIISRAGNRNR-------ELKDVTA-----HAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N E D HAE AI R + Sbjct: 31 VGALVVKDKMIISDGYNGTPSGFENICEDNDGLTKPYVLHAEANAITKLARSGNNS--EG 88 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYG 101 LYVT PC CA I + I+R+ Y Sbjct: 89 STLYVTASPCIECAKLIIQSGIKRVVYA 116 >gi|147921095|ref|YP_685094.1| dCMP deaminase [uncultured methanogenic archaeon RC-I] gi|110620490|emb|CAJ35768.1| dCMP deaminase [uncultured methanogenic archaeon RC-I] Length = 167 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 48/152 (31%), Gaps = 36/152 (23%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN------------------- 42 K FM A ++ + VGAV V N +IIS N Sbjct: 5 SKDEYFMEIAQVVSKRSTCLRLH-VGAVIVKNGQIISTGYNGAPHGFDHCLDIGCIRENQ 63 Query: 43 -----RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 EL HAE AI + + +Y T +PC +C I +I+R Sbjct: 64 NIAHGTRHELCRAV-HAEQNAIIQAAIHGAS--IEGAAVYCTHQPCILCTKMIINGKIKR 120 Query: 98 LYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 + Y P + F A E+ Sbjct: 121 VVYLNEYPDT----SSLDFLKQAG----VEVV 144 >gi|318057036|ref|ZP_07975759.1| putative riboflavin/cytosine deaminase [Streptomyces sp. SA3_actG] Length = 364 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 25/141 (17%) Query: 9 SCALEEAQNAALR---NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 A+ A R N + VG V + + ++ ++ HAEI A+R Sbjct: 11 REAIALAARGLGRTRPNPV-VGCVVLDASGEVAGSGWHQRAGG----PHAEIHALRAAG- 64 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 E VTLEPC C+ A+ A +RR+ + ++P Sbjct: 65 ----ERARGGTALVTLEPCDHTGRTGPCSRALIEAGVRRVVHAVADPTDQATGGADTLRA 120 Query: 119 LATCHHSPEIYPGISEQRSRQ 139 ++ G+ E+ + Sbjct: 121 A-----GVDVEHGLLEREAAD 136 >gi|307083978|ref|ZP_07493091.1| putative cytidine and deoxycytidylate deaminase zinc-binding region [Mycobacterium tuberculosis SUMu012] gi|308366380|gb|EFP55231.1| putative cytidine and deoxycytidylate deaminase zinc-binding region [Mycobacterium tuberculosis SUMu012] Length = 132 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 21/115 (18%) Query: 25 PVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 PVGAV V N +I+ G HAE++A+R + + VT+EPC Sbjct: 32 PVGAVIVDPNGRIVGAGGTEPAGGD----HAEVVALRRAGGLA-----AGAIVVVTMEPC 82 Query: 84 ------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132 C A+ AR+ + Y ++P G G + A ++ G+ Sbjct: 83 NHYGRTPPCVNALIEARVGTVVYAVADPN-GIAGGGAGRLSAAGL----QVRSGV 132 >gi|307571064|emb|CAR84243.1| comEB [Listeria monocytogenes L99] Length = 176 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ AI + + Sbjct: 18 VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 77 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + +LYVT PC C +I A I+++Y+ Sbjct: 78 --KAELYVTHFPCLACTKSIIQAGIKKVYFA 106 >gi|256824048|ref|YP_003148008.1| riboflavin biosynthesis protein RibD [Kytococcus sedentarius DSM 20547] gi|256687441|gb|ACV05243.1| riboflavin biosynthesis protein RibD [Kytococcus sedentarius DSM 20547] Length = 461 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 53/192 (27%), Gaps = 64/192 (33%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR- 64 M AL+ A + P VG V + + + + ++ T HAE+ A+ Sbjct: 22 MRRALDLAARGPAVDPNPRVGCVLLDRDGRTLGEGFHQ----GAGTPHAEVAALLDAGCG 77 Query: 65 ---------------------------------------------ILSQEILP-EVDLYV 78 LP V Sbjct: 78 PAAGPRPSGPVTHAGPRPSGPVTHAGPRPSGPVTHAGPRPSGPVTRAGTPRLPAGATAVV 137 Query: 79 TLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132 TLEPC CA A+ A I R+ S+P + T E+ G+ Sbjct: 138 TLEPCNHTGRTGPCAEALLDAEIARVVIAQSDPTPLASGGAERLRTA-----GVEVVTGV 192 Query: 133 SEQRSRQIIQDF 144 E + + + F Sbjct: 193 LESEATALNRWF 204 >gi|241949383|ref|XP_002417414.1| tRNA-specific adenosine deaminase 3, putative; tRNA-specific adenosine-34 deaminase subunit, putative [Candida dubliniensis CD36] gi|223640752|emb|CAX45066.1| tRNA-specific adenosine deaminase 3, putative [Candida dubliniensis CD36] Length = 327 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 12/100 (12%) Query: 47 LKDVTAHAEILAI----------RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96 + H+ + AI R + + ++ +Y T EPC MCA A+ +RI Sbjct: 211 NHNPQEHSVMQAISKIAEKEVMNRKSNQNERGYLCNDMIVYTTHEPCVMCAMALVHSRIG 270 Query: 97 RLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP--GISE 134 R+ Y GG+E+ Q + EI+ G+ E Sbjct: 271 RIIYLKPEKSSGGLESHYQLGDRDGLNWKFEIWRWLGVDE 310 >gi|108759248|ref|YP_632223.1| cytidine and deoxycytidylate deaminase zinc-binding domain-containing protein [Myxococcus xanthus DK 1622] gi|108463128|gb|ABF88313.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein [Myxococcus xanthus DK 1622] Length = 150 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 41/120 (34%), Gaps = 20/120 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------RNRELK 48 FM A + A A + VGAV V I+S N Sbjct: 8 DQYFMDIATQVASRATCDRKH-VGAVIVRGRTILSTGYNGAIRGLPHCDDVGHMMENGHC 66 Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG--ASNPK 106 T HAE AI + + +Y T PC C I+ A + R+ +G +P+ Sbjct: 67 VATVHAEANAIIQAA--TNGVSIDGATIYTTASPCWPCFKLIANAGLVRIVFGEFYRDPR 124 >gi|57651981|ref|YP_186485.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus COL] gi|87160601|ref|YP_494243.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195398|ref|YP_500202.1| hypothetical protein SAOUHSC_01692 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268072|ref|YP_001247015.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus JH9] gi|150394141|ref|YP_001316816.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus JH1] gi|221141140|ref|ZP_03565633.1| competence protein ComEB [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315374|ref|ZP_04838587.1| competence protein ComEB [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|269203216|ref|YP_003282485.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus ED98] gi|284024647|ref|ZP_06379045.1| competence protein ComEB [Staphylococcus aureus subsp. aureus 132] gi|57286167|gb|AAW38261.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus COL] gi|87126575|gb|ABD21089.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202956|gb|ABD30766.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741141|gb|ABQ49439.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus JH9] gi|149946593|gb|ABR52529.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus JH1] gi|262075506|gb|ACY11479.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus ED98] gi|302333265|gb|ADL23458.1| deoxycytidylate deaminase ComEB [Staphylococcus aureus subsp. aureus JKD6159] gi|315129867|gb|EFT85857.1| possible competence protein ComEB [Staphylococcus aureus subsp. aureus CGS03] gi|315198714|gb|EFU29042.1| possible competence protein ComEB [Staphylococcus aureus subsp. aureus CGS01] Length = 143 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRE---------------LKDVTAHAEILAIRMGCRILSQEI 70 VGA V +N+II+ N + T HAE+ A+ + Sbjct: 18 VGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIEDGHCIRTIHAEMNALLQCAKQGVST- 76 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 +YVT PC C +I A I+R+YY Sbjct: 77 -EGATIYVTHFPCLNCTKSIIQAGIKRIYYA 106 >gi|297617055|ref|YP_003702214.1| riboflavin biosynthesis protein RibD [Syntrophothermus lipocalidus DSM 12680] gi|297144892|gb|ADI01649.1| riboflavin biosynthesis protein RibD [Syntrophothermus lipocalidus DSM 12680] Length = 364 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 19/123 (15%) Query: 1 MKKGNVFMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57 M +M A+E A A R N + VGAV VL +++ ++ T HAEI Sbjct: 1 MSIDEKYMGRAVELAVQALGRTSPNPV-VGAVVVLEGEVVGEGYHQ----LAGTPHAEIH 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ E LYVTLEPC C AI + I+R+ +P Sbjct: 56 ALNQAG-----ERARGATLYVTLEPCCHYGKTPPCVDAIIGSGIKRVVVAIQDPNPQVSG 110 Query: 112 NGT 114 G Sbjct: 111 QGI 113 >gi|332800033|ref|YP_004461532.1| CMP/dCMP deaminase zinc-binding protein [Tepidanaerobacter sp. Re1] gi|332697768|gb|AEE92225.1| CMP/dCMP deaminase zinc-binding protein [Tepidanaerobacter sp. Re1] Length = 138 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 46/121 (38%), Gaps = 28/121 (23%) Query: 1 MKKG--NVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKD------ 49 M+K F+ A + + + P VGAV V +N+I N + D Sbjct: 1 MRKDWDKYFLEIAFKVRERSTC----PRLQVGAVVVKDNRIKGTGYNGSPSGMDHCDDVG 56 Query: 50 ---------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ S E +YVT PC C+ I + I+R+ Y Sbjct: 57 CMIRGNHCVRTIHAEVNALLE----CSPEERKGATIYVTARPCAECSKLIINSGIKRVVY 112 Query: 101 G 101 Sbjct: 113 A 113 >gi|288555665|ref|YP_003427600.1| DNA binding and uptake late competence protein [Bacillus pseudofirmus OF4] gi|288546825|gb|ADC50708.1| late competence operon required for DNA binding and uptake [Bacillus pseudofirmus OF4] Length = 189 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 19/122 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49 + FM+ + A +A + VGA V +II+ N + D Sbjct: 4 ISWDQYFMAQSHLLALRSACTR-LMVGATIVREKRIIAGGYNGSVSGSDHCIDQGCYVVD 62 Query: 50 ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 T HAE+ A+ + +LYVT PC C +I A I++++Y AS+ Sbjct: 63 HHCIRTIHAEVNALLQCAKFGVPT--EGAELYVTHFPCVHCTKSIIQAGIKKVFY-ASDY 119 Query: 106 KG 107 K Sbjct: 120 KN 121 >gi|157415842|ref|YP_001483098.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Campylobacter jejuni subsp. jejuni 81116] gi|157386806|gb|ABV53121.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Campylobacter jejuni subsp. jejuni 81116] gi|307748478|gb|ADN91748.1| Putative riboflavin specific deaminase [Campylobacter jejuni subsp. jejuni M1] gi|315931666|gb|EFV10627.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp. jejuni 327] Length = 336 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 64/177 (36%), Gaps = 44/177 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55 MK +M+ AL EA P VG V + N KI++ +A K AHAE Sbjct: 11 MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNGKILAIKAH-----EKAGLAHAE 62 Query: 56 ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89 + AI + L EI + +VTLEPC CA Sbjct: 63 LNAIAHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 122 Query: 90 ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 S ++++ + G +F EI I ++ +++++ F K Sbjct: 123 FSELGFKKIFISVKDENKIASG-GAEFLKKQG----IEIEFDILKEEGKKLLKPFLK 174 >gi|288906089|ref|YP_003431311.1| competence protein ComEB required for DNA binding and uptake [Streptococcus gallolyticus UCN34] gi|306832128|ref|ZP_07465282.1| competence protein ComEB [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325979054|ref|YP_004288770.1| competence protein ComEB [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732815|emb|CBI14391.1| putative competence protein ComEB required for DNA binding and uptake [Streptococcus gallolyticus UCN34] gi|304425567|gb|EFM28685.1| competence protein ComEB [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178982|emb|CBZ49026.1| competence protein ComEB [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 154 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 48/127 (37%), Gaps = 18/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V +N+II+ N D T HAE+ A+ + Sbjct: 29 VGAVLVKDNRIIATGYNGGVSETDNCNEVGHKMEDGHCIRTVHAEMNALIQCAKEGIST- 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY-GASNPKGGGIENGTQFYTLATCHHSPEIY 129 ++YVT PC C A+ A I+++ Y A IE Q H PE+ Sbjct: 88 -KGTEIYVTHFPCINCTKALLQAGIKKITYKTAYRMHPFAIELMEQKGVEYVQHDVPEVK 146 Query: 130 PGISEQR 136 G+ E Sbjct: 147 LGMDESE 153 >gi|238878760|gb|EEQ42398.1| conserved hypothetical protein [Candida albicans WO-1] Length = 275 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 12/100 (12%) Query: 47 LKDVTAHAEILAI----------RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96 D H+ + AI R + + ++ +Y T EPC MC A+ +RI Sbjct: 159 NNDPQGHSVMEAISKIAEREVMNRKSNQSERGYLCNDMLVYTTHEPCVMCCMALVHSRIG 218 Query: 97 RLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP--GISE 134 R+ Y GG+E+ Q + EI+ G+ E Sbjct: 219 RIIYLKPEKSSGGLESHYQLGDRDGLNWKFEIWRWLGVDE 258 >gi|260945269|ref|XP_002616932.1| hypothetical protein CLUG_02376 [Clavispora lusitaniae ATCC 42720] gi|238848786|gb|EEQ38250.1| hypothetical protein CLUG_02376 [Clavispora lusitaniae ATCC 42720] Length = 590 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 12/111 (10%) Query: 6 VFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM ALE A+ + + VGAV VL+ +++S +R HAE A+ Sbjct: 443 KFMELALENARKCGETQTQFNVGAVLVLDGQVLSTGHSRELPGN---THAEQCALEKYFE 499 Query: 65 ILSQEILP-EVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKG 107 Q +P ++Y T+EPC C I I+ Y G P Sbjct: 500 KTGQRNVPEGTEIYTTMEPCSLRLSGNLPCVDRIIATNIKTCYVGVVEPDT 550 >gi|68476669|ref|XP_717627.1| potential tRNA wobble position adenosine deaminase subunit [Candida albicans SC5314] gi|68476816|ref|XP_717553.1| potential tRNA wobble position adenosine deaminase subunit [Candida albicans SC5314] gi|46439268|gb|EAK98588.1| potential tRNA wobble position adenosine deaminase subunit [Candida albicans SC5314] gi|46439345|gb|EAK98664.1| potential tRNA wobble position adenosine deaminase subunit [Candida albicans SC5314] Length = 326 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 12/100 (12%) Query: 47 LKDVTAHAEILAI----------RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96 D H+ + AI R + + ++ +Y T EPC MC A+ +RI Sbjct: 210 NNDPQGHSVMEAISKIAEREVMNRKSNQSERGYLCNDMLVYTTHEPCVMCCMALVHSRIG 269 Query: 97 RLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP--GISE 134 R+ Y GG+E+ Q + EI+ G+ E Sbjct: 270 RIIYLKPEKSSGGLESHYQLGDRDGLNWKFEIWRWLGVDE 309 >gi|255027259|ref|ZP_05299245.1| hypothetical protein LmonocytFSL_14643 [Listeria monocytogenes FSL J2-003] Length = 183 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ AI + + Sbjct: 28 VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + +LYVT PC C +I A I+++Y+ Sbjct: 88 --KAELYVTHFPCLACTKSIIQAGIKKVYFA 116 >gi|73662478|ref|YP_301259.1| dCMP deaminase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494993|dbj|BAE18314.1| putative dCMP deaminase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 153 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 +K FM+ + A + + VGA V +N+II+ N + Sbjct: 4 IKWEEYFMAQSHLLALRSTCER-LSVGATIVKDNRIIAGGYNGSVSGEVHCIDEGCLLED 62 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ + +YVT PC C +I + I +YY Sbjct: 63 GHCIRTIHAEMNALLQCAKQGVSTD--GATIYVTHFPCLNCTKSIIQSGIDTIYYA 116 >gi|46907711|ref|YP_014100.1| zinc-binding protein ComEB [Listeria monocytogenes serotype 4b str. F2365] gi|226224084|ref|YP_002758191.1| ComEB protein [Listeria monocytogenes Clip81459] gi|254824458|ref|ZP_05229459.1| zinc-binding ComEB family protein [Listeria monocytogenes FSL J1-194] gi|254852107|ref|ZP_05241455.1| zinc-binding ComEB family protein [Listeria monocytogenes FSL R2-503] gi|254931418|ref|ZP_05264777.1| zinc-binding ComEB family protein [Listeria monocytogenes HPB2262] gi|254992215|ref|ZP_05274405.1| ComEB protein [Listeria monocytogenes FSL J2-064] gi|255520859|ref|ZP_05388096.1| ComEB protein [Listeria monocytogenes FSL J1-175] gi|300764852|ref|ZP_07074842.1| hypothetical protein LMHG_12881 [Listeria monocytogenes FSL N1-017] gi|46880980|gb|AAT04277.1| zinc-binding, ComEB family protein [Listeria monocytogenes serotype 4b str. F2365] gi|225876546|emb|CAS05255.1| Putative ComEB protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605409|gb|EEW18017.1| zinc-binding ComEB family protein [Listeria monocytogenes FSL R2-503] gi|293582968|gb|EFF95000.1| zinc-binding ComEB family protein [Listeria monocytogenes HPB2262] gi|293593695|gb|EFG01456.1| zinc-binding ComEB family protein [Listeria monocytogenes FSL J1-194] gi|300514528|gb|EFK41585.1| hypothetical protein LMHG_12881 [Listeria monocytogenes FSL N1-017] gi|328465524|gb|EGF36753.1| ComEB protein [Listeria monocytogenes 1816] gi|328474941|gb|EGF45737.1| ComEB protein [Listeria monocytogenes 220] gi|332311925|gb|EGJ25020.1| ComE operon protein [Listeria monocytogenes str. Scott A] Length = 186 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ AI + + Sbjct: 28 VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + +LYVT PC C +I A I+++Y+ Sbjct: 88 --KAELYVTHFPCLACTKSIIQAGIKKVYFA 116 >gi|326507252|dbj|BAJ95703.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 249 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 31/58 (53%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 D+Y+ EPCTMCA A+ R +R++Y NP G + + + + + +H ++ Sbjct: 166 TGFDIYLVWEPCTMCAMALVHQRFKRVFYAFPNPVTGALGSVYRLHGKKSLNHHYSVF 223 >gi|284036841|ref|YP_003386771.1| CMP/dCMP deaminase zinc-binding protein [Spirosoma linguale DSM 74] gi|283816134|gb|ADB37972.1| CMP/dCMP deaminase zinc-binding protein [Spirosoma linguale DSM 74] Length = 186 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 51/164 (31%) Query: 4 GNVFMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGN------------------ 42 ++FM A+ A+ + + VGAV + +IIS N Sbjct: 25 DDIFMDLAVNLAKRSHCIKAQ----VGAVLTRDTRIISIGYNGPPAGTHNCDEEFPGVGC 80 Query: 43 --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++ + HAE AI + + + +YVTL PC CA I +I R+ + Sbjct: 81 PRDSKGSCSLALHAEQNAILYAAK--NGSEIEGSTIYVTLSPCIACARIIYSMKIARVVF 138 Query: 101 GASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + E Y GI ++ F Sbjct: 139 ---------------------LNSYAE-YKGIPSDEGVDFLRRF 160 >gi|170076474|ref|YP_001733112.1| hypothetical protein SYNPCC7002_G0004 [Synechococcus sp. PCC 7002] gi|169887336|gb|ACB01044.1| Conserved hypothetical protein, with zinc-binding domain [Synechococcus sp. PCC 7002] Length = 191 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 8 MSCALEEAQNAA-LRNEIPVGAVA--VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M +E A+ + P GA + ++I+ N HAE++AI + Sbjct: 33 MRFVVEAARENIIQKTGGPFGAGIFNIETGELIALGVNLVTSENLFFLHAEMVAIAIAQH 92 Query: 65 ILSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 +Q+ L P ++L + EPC MC I + ++R+ GA I Sbjct: 93 KFNQDNLSTANLPALELIASTEPCGMCLGGIHWSNLKRVVSGARGADAEAIGF 145 >gi|167765189|ref|ZP_02437302.1| hypothetical protein BACSTE_03575 [Bacteroides stercoris ATCC 43183] gi|167696817|gb|EDS13396.1| hypothetical protein BACSTE_03575 [Bacteroides stercoris ATCC 43183] Length = 145 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Query: 26 VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N + ++T HAE AI R + Sbjct: 34 VGALIVKDKMIISDGYNGTPSGFENVCEDENNLTKPYVLHAEANAITKIARSNNSSN--G 91 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 +YVT PC CA I A I+R+ Y Sbjct: 92 ATMYVTASPCIECAKLIIQAGIKRVVY 118 >gi|319651626|ref|ZP_08005753.1| ComEB protein [Bacillus sp. 2_A_57_CT2] gi|317396693|gb|EFV77404.1| ComEB protein [Bacillus sp. 2_A_57_CT2] Length = 187 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49 + FM+ + A + + VGA V + +II+ N + + Sbjct: 4 ISWNQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGEHCIDEGCYVID 62 Query: 50 ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ AI + + ++YVT PC C AI A I+ +YY Sbjct: 63 NHCVRTIHAEMNAILQCAKFGVPT--TDAEIYVTHFPCLQCCKAIIQAGIKTVYYA 116 >gi|19551876|ref|NP_599878.1| cytosine/adenosine deaminase [Corynebacterium glutamicum ATCC 13032] gi|62389535|ref|YP_224937.1| cytidine and deoxycytidylate deaminase [Corynebacterium glutamicum ATCC 13032] gi|21323410|dbj|BAB98038.1| Cytosine/adenosine deaminases [Corynebacterium glutamicum ATCC 13032] gi|41324869|emb|CAF19351.1| Cytidine and deoxycytidylate deaminase [Corynebacterium glutamicum ATCC 13032] Length = 164 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 47/139 (33%), Gaps = 10/139 (7%) Query: 1 MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILA 58 M + ++ + +E A A + P G++ V ++ NR D+T H E Sbjct: 1 MTEDDLDLLHRTVELATQALKQGNSPYGSLLVDPFGAVVFEDHNR-DADGDLTKHPEFAI 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY-------GASNPKGGGIE 111 + S +Y + E C MCA A + A + ++Y A K G Sbjct: 60 AKYAIENYSASERAACTVYTSTEHCAMCAGAHAWAGLGKIYCATTGGQTAAWYAKWGAES 119 Query: 112 NGTQFYTLATCHHSPEIYP 130 + + I Sbjct: 120 GPLNPISADKISPNISIEG 138 >gi|312129766|ref|YP_003997106.1| cmp/dcmp deaminase zinc-binding protein [Leadbetterella byssophila DSM 17132] gi|311906312|gb|ADQ16753.1| CMP/dCMP deaminase zinc-binding protein [Leadbetterella byssophila DSM 17132] Length = 152 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 59/146 (40%), Gaps = 34/146 (23%) Query: 1 MKK---GNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGN------------ 42 M K ++FM A++ A+ + + VGAV V + +IIS N Sbjct: 1 MDKPKFDDIFMDLAIQLAKRSHCVRAQ----VGAVLVNDTRIISIGYNGPPAGTHNCDDE 56 Query: 43 --------RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 ++ + HAE AI + + + LYVTL PC CA I + Sbjct: 57 FGEQGCPRDSKGSCSLALHAEQNAILYATKNGAN--VEGSTLYVTLSPCIACARVIFSMK 114 Query: 95 IRRLYYGASNPKGGGIEN--GTQFYT 118 I++++Y S + G+ + G F Sbjct: 115 IKKVFYLNSYAEYKGLSSDEGVDFLR 140 >gi|145294813|ref|YP_001137634.1| hypothetical protein cgR_0760 [Corynebacterium glutamicum R] gi|140844733|dbj|BAF53732.1| hypothetical protein [Corynebacterium glutamicum R] Length = 164 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 47/139 (33%), Gaps = 10/139 (7%) Query: 1 MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILA 58 M + ++ + +E A A + P G++ V ++ NR D+T H E Sbjct: 1 MTEDDLDLLHRTVELATQALKQGNSPYGSLLVDPFGAVVFEDHNR-DADGDLTKHPEFAI 59 Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY-------GASNPKGGGIE 111 + S +Y + E C MCA A + A + ++Y A K G Sbjct: 60 AKYAIENYSASERAACTVYTSTEHCAMCAGAHAWAGLGKIYCATTGEQTAAWYAKWGAES 119 Query: 112 NGTQFYTLATCHHSPEIYP 130 + + I Sbjct: 120 GPLNPISADKISPNISIEG 138 >gi|28572847|ref|NP_789627.1| riboflavin biosynthesis protein RibD [Tropheryma whipplei TW08/27] gi|28410980|emb|CAD67365.1| riboflavin biosynthesis protein RibD [Tropheryma whipplei TW08/27] Length = 371 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 24/137 (17%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+ AQ+ + + P VG V + + ++IS+ + + HAEI+A+R I Sbjct: 16 MHRAITIAQHGPVFDRNPQVGCVILDRDYQLISQGWHM----GSGSEHAEIMALRGAKSI 71 Query: 66 LSQEILPEVDLYVTLEPCT------MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 LS+ +TLEPC+ C A+ A ++ + +G +P+ +G + + Sbjct: 72 LSEPYAA----VITLEPCSSAGQTGPCVRALLDAGVKHVVFGVHDPE----SSGAKVLSE 123 Query: 120 ATCHHSPEIYPGISEQR 136 A +I G+ E+ Sbjct: 124 AG----VKITYGVLERE 136 >gi|18699612|gb|AAL78655.1|AF468456_1 competence protein [Listeria monocytogenes] Length = 176 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ AI + + Sbjct: 18 VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 77 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + +LYVT PC C +I A I+++Y+ Sbjct: 78 --KAELYVTHFPCLACTKSIIQAGIKKVYFA 106 >gi|16800586|ref|NP_470854.1| hypothetical protein lin1518 [Listeria innocua Clip11262] gi|16413991|emb|CAC96749.1| comEB [Listeria innocua Clip11262] Length = 186 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ AI + + Sbjct: 28 VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGASTD 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + +LYVT PC C +I A I+++Y+ Sbjct: 88 --KAELYVTHFPCLACTKSIIQAGIKKVYFA 116 >gi|306834244|ref|ZP_07467363.1| competence protein ComEB [Streptococcus bovis ATCC 700338] gi|304423593|gb|EFM26740.1| competence protein ComEB [Streptococcus bovis ATCC 700338] Length = 155 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 48/127 (37%), Gaps = 18/127 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V +N+II+ N D T HAE+ A+ + Sbjct: 30 VGAVLVKDNRIIATGYNGGVSETDNCNEVGHKMEDGHCIRTVHAEMNALIQCAKEGIST- 88 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY-GASNPKGGGIENGTQFYTLATCHHSPEIY 129 ++YVT PC C A+ A I+++ Y A IE Q H PE+ Sbjct: 89 -KGTEIYVTHFPCINCTKALLQAGIKKITYKTAYRMHPFAIELMEQKGVEYVQHDVPEVK 147 Query: 130 PGISEQR 136 G+ E Sbjct: 148 LGMDESE 154 >gi|262202280|ref|YP_003273488.1| riboflavin biosynthesis protein RibD [Gordonia bronchialis DSM 43247] gi|262085627|gb|ACY21595.1| riboflavin biosynthesis protein RibD [Gordonia bronchialis DSM 43247] Length = 333 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 41/138 (29%), Gaps = 23/138 (16%) Query: 8 MSCALEE--AQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A+ E A PVGAV V I+ HAEI+A+ Sbjct: 7 MRQAITESAAAQGVSTPNPPVGAVIVDRAGTIVGVGH--TAPPGGP--HAEIVALTQAGA 62 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 VTLEPC C+ A+ A + + +G ++P Sbjct: 63 AARG-----ATAVVTLEPCNHTGRTGPCSQALIAAGVAHVCFGVADPNPTAAGGADTLRA 117 Query: 119 LATCHHSPEIYPGISEQR 136 + G+ Sbjct: 118 A-----GVSVDAGVLADE 130 >gi|239930347|ref|ZP_04687300.1| riboflavin/cytosine deaminase [Streptomyces ghanaensis ATCC 14672] gi|291438692|ref|ZP_06578082.1| bifunctional enzyme deaminase/reductase [Streptomyces ghanaensis ATCC 14672] gi|291341587|gb|EFE68543.1| bifunctional enzyme deaminase/reductase [Streptomyces ghanaensis ATCC 14672] Length = 377 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 16/123 (13%) Query: 4 GNVFMSCALEEAQNAALRNE-IPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 + +++ A + A+ VGAV V + ++R +R E D HAE A+ Sbjct: 231 DHHWLALACDLAERCPPSGTAFSVGAVVVAADGTELARGHSR--EGGDPVVHAEEAAL-- 286 Query: 62 GCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKG---GGIE 111 + L +Y +LEPC CA I A IRR+ P G Sbjct: 287 AKTDPTDPRLATATVYSSLEPCARRASRPAPCARLILDAGIRRVVTAWREPDTFVPGADG 346 Query: 112 NGT 114 +G Sbjct: 347 SGV 349 >gi|226226877|ref|YP_002760983.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Gemmatimonas aurantiaca T-27] gi|226090068|dbj|BAH38513.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Gemmatimonas aurantiaca T-27] Length = 384 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 48/157 (30%), Gaps = 22/157 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 FM A+ A+ A ++ P VGAV V + +++ ++ Sbjct: 24 DDVRFMRRAIALAERGA--GQVAPNPKVGAVLVRDGQVVGEGWHQQYGGPHAEV-----H 76 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 ++ YV+LEPC C A+ A + R+ +P Sbjct: 77 ALAAAHAVAANAARGATAYVSLEPCNHHGKTPPCTEALIAAGVARVVCATRDPNPKAAGG 136 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 + + G+ E + FF R Sbjct: 137 IERLEAA-----GIRVTVGVCEHEALVQNAPFFHAAR 168 >gi|189462145|ref|ZP_03010930.1| hypothetical protein BACCOP_02827 [Bacteroides coprocola DSM 17136] gi|189431118|gb|EDV00103.1| hypothetical protein BACCOP_02827 [Bacteroides coprocola DSM 17136] Length = 144 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 42/110 (38%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 +M A ++N+ VGA+ V N IIS N + +T Sbjct: 12 DKRYMQMATIWSENSYCNRRK-VGALIVKNKMIISDGYNGTPAGFENVCEDEHGITKPYV 70 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC CA I A I+R+ + Sbjct: 71 LHAEANAITKIARSNNSS--EGATLYVTASPCIECAKLIIQAGIKRVVFA 118 >gi|313889696|ref|ZP_07823339.1| putative ComE operon protein 2 [Streptococcus pseudoporcinus SPIN 20026] gi|313121993|gb|EFR45089.1| putative ComE operon protein 2 [Streptococcus pseudoporcinus SPIN 20026] Length = 152 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V +N+II+ N D T HAE+ A+ + Sbjct: 29 VGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEDGHCIRTVHAEMNALIQCAKEGISTD 88 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 +LYVT PC C A+ A I+++ Y Sbjct: 89 --GTELYVTHFPCINCTKALLQAGIKKITY 116 >gi|242075038|ref|XP_002447455.1| hypothetical protein SORBIDRAFT_06g001320 [Sorghum bicolor] gi|241938638|gb|EES11783.1| hypothetical protein SORBIDRAFT_06g001320 [Sorghum bicolor] Length = 412 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 30/58 (51%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 D+Y+ EPCTMCA A+ R +R++Y NP G + + + + +H ++ Sbjct: 336 TGFDIYLVWEPCTMCAMALVHHRFKRVFYAFPNPVTGALGGVYRLHGERSLNHHYNVF 393 >gi|121612362|ref|YP_001001265.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp. jejuni 81-176] gi|121504161|gb|EAQ72749.2| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp. jejuni 81-176] Length = 336 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 64/177 (36%), Gaps = 44/177 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55 MK +M+ AL EA P VG V + N KI++ +A K AHAE Sbjct: 11 MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNGKILAIKAH-----EKAGLAHAE 62 Query: 56 ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89 + AI + L EI + +VTLEPC CA Sbjct: 63 LNAITHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 122 Query: 90 ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 S ++++ + G +F E+ I ++ +++++ F K Sbjct: 123 FSELGFKKIFISVKDGNKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLKPFLK 174 >gi|86152942|ref|ZP_01071147.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp. jejuni HB93-13] gi|167006160|ref|ZP_02271918.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp. jejuni 81-176] gi|85843827|gb|EAQ61037.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp. jejuni HB93-13] Length = 326 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 64/177 (36%), Gaps = 44/177 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55 MK +M+ AL EA P VG V + N KI++ +A K AHAE Sbjct: 1 MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNGKILAIKAH-----EKAGLAHAE 52 Query: 56 ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89 + AI + L EI + +VTLEPC CA Sbjct: 53 LNAITHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 112 Query: 90 ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 S ++++ + G +F E+ I ++ +++++ F K Sbjct: 113 FSELGFKKIFISVKDGNKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLKPFLK 164 >gi|224500498|ref|ZP_03668847.1| hypothetical protein LmonF1_12846 [Listeria monocytogenes Finland 1988] gi|224501577|ref|ZP_03669884.1| hypothetical protein LmonFR_03502 [Listeria monocytogenes FSL R2-561] Length = 160 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ AI + + Sbjct: 2 VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 61 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + +LYVT PC C +I A I+++Y+ Sbjct: 62 --KAELYVTHFPCLACTKSIIQAGIKKVYFA 90 >gi|313623713|gb|EFR93860.1| ComE operon protein 2 [Listeria innocua FSL J1-023] Length = 186 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ AI + + Sbjct: 28 VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGASTD 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + +LYVT PC C +I A I+++Y+ Sbjct: 88 --KAELYVTHFPCLACTKSIIQAGIKKVYFA 116 >gi|226508300|ref|NP_001147072.1| hydrolase/ zinc ion binding protein [Zea mays] gi|195607072|gb|ACG25366.1| hydrolase/ zinc ion binding protein [Zea mays] Length = 412 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 30/58 (51%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 D+Y+ EPCTMCA A+ R +R++Y NP G + + + + +H ++ Sbjct: 336 TGFDIYLVWEPCTMCAMALVHHRFKRVFYAFPNPVAGALGGVYRLHGERSLNHHYNVF 393 >gi|217964371|ref|YP_002350049.1| ComE operon protein 2 [Listeria monocytogenes HCC23] gi|217333641|gb|ACK39435.1| ComE operon protein 2 [Listeria monocytogenes HCC23] Length = 160 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ AI + + Sbjct: 2 VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 61 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + +LYVT PC C +I A I+++Y+ Sbjct: 62 --KAELYVTHFPCLACTKSIIQAGIKKVYFA 90 >gi|108804483|ref|YP_644420.1| CMP/dCMP deaminase [Rubrobacter xylanophilus DSM 9941] gi|108765726|gb|ABG04608.1| CMP/dCMP deaminase, zinc-binding protein [Rubrobacter xylanophilus DSM 9941] Length = 157 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 46/126 (36%), Gaps = 30/126 (23%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRN---------------- 44 FM A E A + P VGAV V + +I++ N + Sbjct: 16 DEYFMRIAHEVATRSTC----PRLAVGAVVVRDRRILTTGYNGSPSGMPHCDEVGCLIRV 71 Query: 45 ---RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY- 100 RE T HAE A+ + +Y T +PC +C I + IR +YY Sbjct: 72 VDGRESCQRTLHAEQNALIQAAYHGVSVR--DAAMYCTHQPCLLCVKMIMNSGIREVYYA 129 Query: 101 -GASNP 105 G +P Sbjct: 130 GGYPDP 135 >gi|20091386|ref|NP_617461.1| hypothetical protein MA2559 [Methanosarcina acetivorans C2A] gi|19916523|gb|AAM05941.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans C2A] Length = 206 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 3/101 (2%) Query: 14 EAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQ-EI 70 A + VG++ V + K+IS N H E++A+ + Sbjct: 55 LALKSVDSGNYGVGSILVDADGKVISMGHNLVYSPHFRSDLHGEMVALNLFENEHPNITT 114 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 L LY +LE C MC + + + + + +S+P+ G + Sbjct: 115 LEGYTLYTSLESCPMCLIRLISSGVNAILHVSSDPRAGMVG 155 >gi|313618870|gb|EFR90742.1| ComE operon protein 2 [Listeria innocua FSL S4-378] Length = 186 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ AI + + Sbjct: 28 VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGASTD 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + +LYVT PC C +I A I+++Y+ Sbjct: 88 --KAELYVTHFPCLACTKSIIQAGIKKVYFA 116 >gi|293401503|ref|ZP_06645646.1| probable deoxycytidylate deaminase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305141|gb|EFE46387.1| probable deoxycytidylate deaminase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 161 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 45/122 (36%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------R 43 + FM A A + P VGAV V ++++S N Sbjct: 7 LSWDEYFMGLAHLSAMRSKD----PSTQVGAVIVSGEHRVVSIGYNGFPNGCSDDEFPWD 62 Query: 44 NRELKDVTA-----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 T HAE+ AI + S+ L +YV+L PC CA AI + I R+ Sbjct: 63 REGDFGATKYPYVVHAELNAI-----LNSKNDLRGCSIYVSLFPCNECAKAIIQSGISRI 117 Query: 99 YY 100 Y Sbjct: 118 VY 119 >gi|222153659|ref|YP_002562836.1| cytidine and deoxycytidylate deaminase [Streptococcus uberis 0140J] gi|222114472|emb|CAR43320.1| putative cytidine and deoxycytidylate deaminase [Streptococcus uberis 0140J] Length = 151 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V +N+II+ N D T HAE+ A+ + Sbjct: 29 VGAVLVKDNRIIATGYNGGVSATDNCDEAGHYMEDGHCIRTVHAEMNALIQCAKEGISTD 88 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++YVT PC C A+ A I+++ Y Sbjct: 89 --GTEIYVTHFPCINCTKALLQAGIKKITY 116 >gi|321262599|ref|XP_003196018.1| cytosine deaminase [Cryptococcus gattii WM276] gi|317462493|gb|ADV24231.1| cytosine deaminase, putative [Cryptococcus gattii WM276] Length = 252 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 14/111 (12%) Query: 6 VFMSCALEEAQNAALRN--EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A EA A + P G V +++++ N+ + H EI AI Sbjct: 39 HWMRVA-NEAVYADGHPCPQAPFGTAIVNTTSDELVCVTSNKVGVTGNPAMHGEISAITH 97 Query: 62 GCRIL------SQEILPE---VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 +L QEIL + LY EPC MCA+AI A + + YG S Sbjct: 98 CTEVLTGQGWTPQEILAGWKDLSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148 >gi|326773583|ref|ZP_08232866.1| riboflavin biosynthesis protein RibD [Actinomyces viscosus C505] gi|326636813|gb|EGE37716.1| riboflavin biosynthesis protein RibD [Actinomyces viscosus C505] Length = 362 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 51/145 (35%), Gaps = 24/145 (16%) Query: 11 ALEEAQNAALRNEIP------VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 A++ A AA + P VG V + + +++ +R +AHAE+ A+ Sbjct: 11 AMQRALRAAASPDTPPGPNPRVGCVILSSDGDVLAEGHHR----GAGSAHAEVDALANLA 66 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + + VTLEPC C A+ A + + Y +P Sbjct: 67 ATGASAR--GATVLVTLEPCNHQGRTGPCVQALLDAGVAEVIYAQDDPTEQAGGGAATLE 124 Query: 118 TLATCHHSPEIYPGISEQRSRQIIQ 142 + G+ Q + ++ + Sbjct: 125 AG-----GVRVRRGLCAQEAARLNR 144 >gi|254030277|gb|ACT53870.1| DRAP deaminase [Candida membranifaciens] Length = 357 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 57/151 (37%), Gaps = 20/151 (13%) Query: 5 NVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 N +M A+E A+ E VGAV V + +I+ R E HAE A+ Sbjct: 211 NKYMELAIELAEK---CGETTTQFNVGAVLVYDGEILGTGHTRELEGN---THAEQCALE 264 Query: 61 MGCRILSQEILP-EVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + +P +Y ++EPC C I I + G P G +++ Sbjct: 265 KYFTRTGERNVPYGTKIYTSMEPCSFRLSGNLPCVERILQTNITTCFVGVVEP-GDFVKD 323 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 T TL + PG E++ +I + Sbjct: 324 NTSVQTLESKGVEYIHIPGY-EEKCLEIAKR 353 >gi|307107383|gb|EFN55626.1| hypothetical protein CHLNCDRAFT_133790 [Chlorella variabilis] Length = 449 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 33/64 (51%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 D YV EPCTMCA A+ +R+RR+ + ++ + G + + + + +H ++Y Sbjct: 383 TGYDCYVLREPCTMCAMALVHSRLRRVVFCCADRRYGALGGAFRLHAQRSLNHHYQVYRL 442 Query: 132 ISEQ 135 + Sbjct: 443 PLAE 446 >gi|257067228|ref|YP_003153483.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Brachybacterium faecium DSM 4810] gi|256558046|gb|ACU83893.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase [Brachybacterium faecium DSM 4810] Length = 355 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 44/121 (36%), Gaps = 19/121 (15%) Query: 9 SCALEEAQNAALRNEIP------VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 AL A A +P VG V + + +++ +R TAHAE A+ Sbjct: 7 RRALARALEIAADPSVPLGPNPRVGCVLLGADGAMLAEGHHR----GAGTAHAEADALAR 62 Query: 62 GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115 R L L VTLEPC CA A+ A I R+ ++P + Sbjct: 63 A-RSLGIP-LTGATAVVTLEPCAHTGRTGPCAEALLEAGIGRVVIARTDPNPVASGGIDR 120 Query: 116 F 116 Sbjct: 121 L 121 >gi|86157977|ref|YP_464762.1| zinc-binding CMP/dCMP deaminase [Anaeromyxobacter dehalogenans 2CP-C] gi|197122718|ref|YP_002134669.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter sp. K] gi|220917501|ref|YP_002492805.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter dehalogenans 2CP-1] gi|85774488|gb|ABC81325.1| zinc-binding CMP/dCMP deaminase [Anaeromyxobacter dehalogenans 2CP-C] gi|196172567|gb|ACG73540.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter sp. K] gi|219955355|gb|ACL65739.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter dehalogenans 2CP-1] Length = 164 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 40/113 (35%), Gaps = 18/113 (15%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---------------LK 48 FM+ A A A + VGAV V + I+S N + Sbjct: 8 DEYFMNVARVVATRATCDRKH-VGAVLVRDKTILSTGYNGSIRGLPHCSEAGHMMEDGHC 66 Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE AI + + +Y T PC C I+ A RR+ +G Sbjct: 67 VATVHAEANAIIQAAKNGVA--IEGASIYTTASPCWPCFKLIANAGCRRIVFG 117 >gi|83591205|ref|YP_431214.1| CMP/dCMP deaminase, zinc-binding [Moorella thermoacetica ATCC 39073] gi|83574119|gb|ABC20671.1| CMP/dCMP deaminase, zinc-binding protein [Moorella thermoacetica ATCC 39073] Length = 135 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 44/118 (37%), Gaps = 22/118 (18%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------R 43 M+K F+ A + A + + VGAV V + +I N Sbjct: 1 MRKEWDEYFLDIAFQVASRSTCNR-LAVGAVVVKDKRIKGTGYNGAPHGLPHCLEVGCLM 59 Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E T HAEI A+ S E +YVT PC CA I + I+RL Y Sbjct: 60 EGEHCLRTIHAEINALLE----CSPEERQGATMYVTDYPCERCALVIVQSGIKRLVYA 113 >gi|150951310|ref|XP_001387615.2| deoxycytidylate deaminase [Scheffersomyces stipitis CBS 6054] gi|149388487|gb|EAZ63592.2| deoxycytidylate deaminase [Pichia stipitis CBS 6054] Length = 341 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 41/123 (33%), Gaps = 31/123 (25%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRN--------RELKDVTA- 52 + FM A + A A N + VGAV V N++I+ N D Sbjct: 193 DSYFMRLA-DLA--ALRSNCMKRRVGAVIVHENRVIATGYNGTPRHLTNCNEGGCDRCNK 249 Query: 53 --------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE A+ R I E LY PC C+ I + I+ + Sbjct: 250 GSVGGTSLLTCLCLHAEENALLEAGR---DRIRGEAVLYCNTCPCLTCSIKIVQSGIKEV 306 Query: 99 YYG 101 Y Sbjct: 307 VYA 309 >gi|322412648|gb|EFY03556.1| ComE operon protein 2 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 155 Score = 71.9 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V +N+II+ N D T HAE+ A+ + Sbjct: 29 VGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEDGHCIRTVHAEMNALIQCAKEGISTD 88 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++YVT PC C A+ A I+++ Y Sbjct: 89 --GTEIYVTHFPCINCTKALLQAGIKKITY 116 >gi|218261316|ref|ZP_03476184.1| hypothetical protein PRABACTJOHN_01850 [Parabacteroides johnsonii DSM 18315] gi|218224097|gb|EEC96747.1| hypothetical protein PRABACTJOHN_01850 [Parabacteroides johnsonii DSM 18315] Length = 144 Score = 71.9 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 15/112 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT- 51 ++ ++ A A+N+ + VGA+ V + IIS N + +VT Sbjct: 9 LELDKRYLRMAAVWAENSYCKR-RQVGALIVRDQMIISDGYNGTPSGFENVCEDENNVTK 67 Query: 52 ---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI + + +YVT PC CA I + I+R+ Y Sbjct: 68 PYVLHAEANAITKVAASSNSS--KDATIYVTSAPCIECAKLIIQSGIKRVVY 117 >gi|169825268|ref|YP_001692879.1| putative late competence protein required for DNA binding [Finegoldia magna ATCC 29328] gi|167832073|dbj|BAG08989.1| putative late competence protein required for DNA binding [Finegoldia magna ATCC 29328] Length = 139 Score = 71.9 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 43/118 (36%), Gaps = 21/118 (17%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN--------------- 42 M+K FM AL A + VG V V +N+I+S N Sbjct: 1 MRKSWNEYFMDLALNVATRSTCDRAF-VGCVLVNSDNRIVSTGYNGAISGNPHCDEVGHT 59 Query: 43 RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ + + YVT PC C ++ A I ++YY Sbjct: 60 LRDGHCIATIHAEMNALLYCAKEGIA--VKGCICYVTHFPCLNCTKSLIQAGISKIYY 115 >gi|116872912|ref|YP_849693.1| zinc-binding, ComEB family competence protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741790|emb|CAK20914.1| zinc-binding, ComEB family competence protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 186 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ AI + + Sbjct: 28 VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGASTD 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E LYVT PC C +I A I+++Y+ Sbjct: 88 RAE--LYVTHFPCLACTKSIIQAGIKKVYFA 116 >gi|333030069|ref|ZP_08458130.1| CMP/dCMP deaminase zinc-binding [Bacteroides coprosuis DSM 18011] gi|332740666|gb|EGJ71148.1| CMP/dCMP deaminase zinc-binding [Bacteroides coprosuis DSM 18011] Length = 146 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 14/87 (16%) Query: 26 VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N + + T HAE AI + Sbjct: 36 VGALIVKDKMIISDGYNGTPSGFENICEDDNNTTKPYVLHAEANAITKIACSNNSSD--G 93 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 +YVT PC CA I A I+R+ Y Sbjct: 94 ATMYVTAAPCIECAKLIIQAGIKRVVY 120 >gi|326693482|ref|ZP_08230487.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Leuconostoc argentinum KCTC 3773] Length = 352 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 51/132 (38%), Gaps = 21/132 (15%) Query: 23 EIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 E P VGAV V +N++++ + AHAEI A LYVTLE Sbjct: 24 ENPRVGAVIVKDNQVLAVGWHERFGG----AHAEINAFHHLGAAHDA---QGGTLYVTLE 76 Query: 82 PCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE- 134 PC + CA I + R+ G +P G Q A + + + Sbjct: 77 PCAVRGKVAACAETIRDWGLARVVIGDLDPNPTTHGLGVQKLRAAG----ISVV--VLDT 130 Query: 135 QRSRQIIQDFFK 146 SRQ+ F++ Sbjct: 131 DDSRQLNPAFYQ 142 >gi|312885990|ref|ZP_07745618.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM 18603] gi|311301527|gb|EFQ78568.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM 18603] Length = 150 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 32/126 (25%) Query: 1 MKK---GNVFMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGN------------ 42 M+K ++FM+ AL+ AQ + + VGAV + +IIS N Sbjct: 1 MQKPSFEHIFMNLALDLAQRSHCVKAQ----VGAVLAKDTRIISIGYNGPPAGTHNCDEE 56 Query: 43 ------RNRELKDVTA--HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 + HAE AI + + L LY TL PC CA I A Sbjct: 57 WPETGCARDAKGSCSLALHAEENAILYA--VKNGARLEGATLYTTLSPCLPCARLIFSAG 114 Query: 95 IRRLYY 100 I+ +Y+ Sbjct: 115 IKHVYF 120 >gi|47094097|ref|ZP_00231822.1| comE operon protein 2 [Listeria monocytogenes str. 4b H7858] gi|47017527|gb|EAL08335.1| comE operon protein 2 [Listeria monocytogenes str. 4b H7858] Length = 160 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ AI + + Sbjct: 2 VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 61 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + +LYVT PC C +I A I+++Y+ Sbjct: 62 --KAELYVTHFPCLACTKSIIQAGIKKVYFA 90 >gi|313681592|ref|YP_004059330.1| riboflavin biosynthesis protein ribd [Sulfuricurvum kujiense DSM 16994] gi|313154452|gb|ADR33130.1| riboflavin biosynthesis protein RibD [Sulfuricurvum kujiense DSM 16994] Length = 336 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 57/171 (33%), Gaps = 42/171 (24%) Query: 8 MSCALEEAQNAALRNEIP---VGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMG- 62 M+ AL A P VGAV N ++S ++ HAE+ A+R Sbjct: 10 MTLALNAAWE-YQLLTFPNPAVGAVCLSDNGTVVSVGTHKRAGG----PHAEVYALRDAY 64 Query: 63 ---------------------CRILSQEILPEVDLYVTLEPC------TMCAAAISLARI 95 R I V + VTLEPC CA I I Sbjct: 65 TLLSGDTTIAGCDDSHRIHDYLRTRHNGIFHTVSMAVTLEPCSHSGKTPSCALLIRDLGI 124 Query: 96 RRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 +R+Y +P G + A E GI E+ ++++ F + Sbjct: 125 KRVYISVKDPNPAAAG-GASLLSDAGA----ECVFGIMEEEGEKLLEPFIR 170 >gi|313886183|ref|ZP_07819913.1| dCMP deaminase [Porphyromonas asaccharolytica PR426713P-I] gi|332299700|ref|YP_004441621.1| CMP/dCMP deaminase zinc-binding protein [Porphyromonas asaccharolytica DSM 20707] gi|312924362|gb|EFR35141.1| dCMP deaminase [Porphyromonas asaccharolytica PR426713P-I] gi|332176763|gb|AEE12453.1| CMP/dCMP deaminase zinc-binding protein [Porphyromonas asaccharolytica DSM 20707] Length = 161 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 ++ A A+N+ R VGA+ V N IIS N + + +T Sbjct: 19 DRRYLRMARIWAENSYCRR-RQVGALIVHNQMIISDGYNGTPSGFENVCEDDEGITKPYV 77 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI + +Y+T PC CA I +RIRR+ YG Sbjct: 78 LHAEANAITKVAASGNN--CTGATIYITASPCLECAKLIIQSRIRRVVYG 125 >gi|167765731|ref|ZP_02437784.1| hypothetical protein CLOSS21_00220 [Clostridium sp. SS2/1] gi|317497038|ref|ZP_07955366.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lachnospiraceae bacterium 5_1_63FAA] gi|167712583|gb|EDS23162.1| hypothetical protein CLOSS21_00220 [Clostridium sp. SS2/1] gi|291558932|emb|CBL37732.1| Deoxycytidylate deaminase [butyrate-producing bacterium SSC/2] gi|316895698|gb|EFV17852.1| cytidine and deoxycytidylate deaminase zinc-binding region [Lachnospiraceae bacterium 5_1_63FAA] Length = 159 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 46/127 (36%), Gaps = 25/127 (19%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRN-----------RELK 48 + FM A+ AQ + + VGA V + NKI+S N Sbjct: 7 ISWDQYFMGIAILSAQRSKD-DHTQVGACLVNDHNKILSVGYNGMPIGCNDDDMPWEREG 65 Query: 49 DVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 D HAE+ AI L +YVTL PC CA AI + ++ + Y Sbjct: 66 DPLHTKYFYVCHAELNAILN----YGGGSLDGARVYVTLFPCNECAKAIIQSGMKEVIY- 120 Query: 102 ASNPKGG 108 + G Sbjct: 121 MQDKYAG 127 >gi|260592105|ref|ZP_05857563.1| cytidine/deoxycytidylate deaminase family protein [Prevotella veroralis F0319] gi|260535983|gb|EEX18600.1| cytidine/deoxycytidylate deaminase family protein [Prevotella veroralis F0319] Length = 144 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 43/110 (39%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR-------ELKDVTA---- 52 ++ A A+N+ R VGA+ V + IIS N E + T Sbjct: 9 DYRYLRMARIWAENSYCRR-RQVGALVVKDKMIISDGYNGTPSGFENICEDESGTTFPYV 67 Query: 53 -HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC C+ I A IRR+ Y Sbjct: 68 LHAEANAITKLARSSNNSD--GATLYVTASPCIECSKLIIQAGIRRVVYA 115 >gi|54112173|gb|AAV28775.1| FCY1p [Cryptococcus gattii] Length = 232 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 14/111 (12%) Query: 6 VFMSCALEEAQNAALRN--EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A EA A + P G V +++++ N+ + H EI AI Sbjct: 39 HWMRVA-NEAVYADGHPCPQAPFGTAIVNTTSDELVCVTSNKVGVTGNPAMHGEISAITH 97 Query: 62 GCRIL------SQEILPE---VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 +L QEIL + LY EPC MCA+AI A + + YG S Sbjct: 98 CTEVLTGQGWTPQEILAGWKDLSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148 >gi|319901309|ref|YP_004161037.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides helcogenes P 36-108] gi|319416340|gb|ADV43451.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides helcogenes P 36-108] Length = 145 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Query: 26 VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N + +VT HAE AI R + Sbjct: 34 VGALIVKDKMIISDGYNGTPAGFENICEDENNVTKPYVLHAEANAITKIARSNNSSN--G 91 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 +YVT PC C+ I A I+R+ Y Sbjct: 92 ATMYVTASPCIECSKLIIQAGIKRVVY 118 >gi|114704832|ref|ZP_01437740.1| riboflavin-specific deaminase / reductase [Fulvimarina pelagi HTCC2506] gi|114539617|gb|EAU42737.1| riboflavin-specific deaminase / reductase [Fulvimarina pelagi HTCC2506] Length = 381 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 53/153 (34%), Gaps = 25/153 (16%) Query: 4 GNVFMSCALEEA-QNAALRNEIP-VGAVAVLNN----KIISRAGNRNRELKDVTAHAEIL 57 FM+ A+ ++A L P V + V ++ +I+ R + HAE Sbjct: 18 NERFMAAAIRFGFRHAGLTGTNPSVATLIVRDDGAGPRIVGRG----ITARGGRPHAEAQ 73 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ + YVTLEPC CA A+ + + R+ A++P Sbjct: 74 ALGEAGTLA-----RGAVAYVTLEPCAHHGRTPPCAEALVASGVSRVVSAAADPDPRVDG 128 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + P + + + + + Sbjct: 129 KGHAILEKGGL----SVTPRVMAKEAASDLSAY 157 >gi|54112139|gb|AAV28742.1| FCY1p [Cryptococcus gattii] Length = 232 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 14/111 (12%) Query: 6 VFMSCALEEAQNAALRN--EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A EA A + P G V +++++ N+ + H EI AI Sbjct: 39 HWMRVA-NEAVYADGHPCPQAPFGTAIVNTTSDELVCVTSNKVGVTGNPAMHGEISAITH 97 Query: 62 GCRIL------SQEILPE---VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 +L QEIL + LY EPC MCA+AI A + + YG S Sbjct: 98 CTEVLTGQGWTPQEILAGWKDLSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148 >gi|190347088|gb|EDK39300.2| hypothetical protein PGUG_03398 [Meyerozyma guilliermondii ATCC 6260] Length = 611 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 14/147 (9%) Query: 3 KGNVFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL EA+ + + VGAV V ++++ +R HAE A+ Sbjct: 455 SHRPFMELALSEAEKCGETQTQFNVGAVLVHEGEVLATGHSRELPGN---THAEQCALEK 511 Query: 62 GCRILSQEILP-EVDLYVTLEPCT-------MCAAAISLARIRRLYYGASNPKGGGIENG 113 + + +P +Y T+EPC+ C I I+ + G P +++ Sbjct: 512 YFKASNSTEVPEGTVIYTTMEPCSFRLSGNEPCVQRILKTCIKTCFVGVIEPDT-FVKDN 570 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQI 140 + L+ G E++ +I Sbjct: 571 SSLRQLSDNGVDYVHIGGY-EEKCLEI 596 >gi|146416095|ref|XP_001484017.1| hypothetical protein PGUG_03398 [Meyerozyma guilliermondii ATCC 6260] Length = 611 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 14/147 (9%) Query: 3 KGNVFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM AL EA+ + + VGAV V ++++ +R HAE A+ Sbjct: 455 SHRPFMELALSEAEKCGETQTQFNVGAVLVHEGEVLATGHSRELPGN---THAEQCALEK 511 Query: 62 GCRILSQEILP-EVDLYVTLEPCT-------MCAAAISLARIRRLYYGASNPKGGGIENG 113 + + +P +Y T+EPC+ C I I+ + G P +++ Sbjct: 512 YFKASNSTEVPEGTVIYTTMEPCSFRLSGNEPCVQRILKTCIKTCFVGVIEPDT-FVKDN 570 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQI 140 + L+ G E++ +I Sbjct: 571 SSLRQLSDNGVDYVHIGGY-EEKCLEI 596 >gi|255728969|ref|XP_002549410.1| deoxycytidylate deaminase [Candida tropicalis MYA-3404] gi|240133726|gb|EER33282.1| deoxycytidylate deaminase [Candida tropicalis MYA-3404] Length = 339 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 31/123 (25%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGN---------------RNRE 46 + FM A + A A N + VG V V N++I+ N R + Sbjct: 191 DSYFMRLA-DLA--ALRSNCMKRRVGCVIVRENRVIATGYNGTPRHLTNCNDGGCSRCNK 247 Query: 47 LKDVTA--------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + A HAE A+ R I E LY PC C+ I + I+ + Sbjct: 248 GQGSGASLSTCLCLHAEENALLEAGR---DRIRGESVLYCNTCPCLTCSIKIVQSGIKEV 304 Query: 99 YYG 101 Y Sbjct: 305 VYA 307 >gi|158314624|ref|YP_001507132.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec] gi|158110029|gb|ABW12226.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec] Length = 150 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 14/112 (12%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ A+E A VGAV V NN+ I+ +R E+ D HAE A+ Sbjct: 5 DDHHWMTRAIELAHRCPPATGAYSVGAVIVDENNEEIAFGFSR--EVDDAV-HAEESAL- 60 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNP 105 + L +Y TLEPC+ C I A+I R+ P Sbjct: 61 -AKIDPADPRLATATIYSTLEPCSQRKSRPRTCTQLILEAKIPRVVIAWREP 111 >gi|56566242|gb|AAV98449.1| FCY1 [Cryptococcus neoformans var. grubii] Length = 225 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 14/111 (12%) Query: 6 VFMSCALEEAQNAALRN--EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M A EA A + P G V +++++ N+ + H EI AI Sbjct: 39 HWMRVA-NEAVYADGHPCPQAPFGTAIVNTTSDELVCVISNKVGVTGNPAMHGEISAITH 97 Query: 62 ------GCRILSQEILPE---VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 SQEIL LY EPC MCA+AI A + + YG S Sbjct: 98 CTEVLTAQGWTSQEILAGWKDFSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148 >gi|228472740|ref|ZP_04057498.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga gingivalis ATCC 33624] gi|228275791|gb|EEK14557.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga gingivalis ATCC 33624] Length = 150 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 19/116 (16%) Query: 1 MKK----GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---------L 47 M+K +M A E A+ + + + VGA+ V + IIS N Sbjct: 5 MEKQERYDRAYMRMAQEWAKLSYSQRKQ-VGAIIVKDRMIISDGYNGTPTGFDNCCEDAQ 63 Query: 48 KDVTA---HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D HAE AI LY+T+ PC C+ I A I R+ Y Sbjct: 64 GDTLWYVLHAEANAILKVAASTQS--CAGATLYITMSPCRECSKLIHQAGIVRVVY 117 >gi|254519765|ref|ZP_05131821.1| deoxycytidylate deaminase [Clostridium sp. 7_2_43FAA] gi|226913514|gb|EEH98715.1| deoxycytidylate deaminase [Clostridium sp. 7_2_43FAA] Length = 164 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 44/122 (36%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + FM A+ + + P VGA V +NKI+S+ N Sbjct: 7 ISWDEYFMGVAILAGKRSKD----PSTQVGACIVDNDNKILSQGYNGLPRGCSDDEFPWD 62 Query: 43 ---RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 E K HAE+ AI L +YV L PC CA AI A I+ + Sbjct: 63 REGHVLETKYPYVVHAELNAILN----SRGTNLYGAKIYVALFPCNECAKAIIQAGIKEV 118 Query: 99 YY 100 Y Sbjct: 119 VY 120 >gi|148240028|ref|YP_001225415.1| riboflavin biosynthesis protein ribD (diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase) [Synechococcus sp. WH 7803] gi|147848567|emb|CAK24118.1| Riboflavin biosynthesis protein ribD (Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase) [Synechococcus sp. WH 7803] Length = 372 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 43/126 (34%), Gaps = 20/126 (15%) Query: 26 VGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83 VGAV + ++ + + + HAE+ + + VTLEPC Sbjct: 35 VGAVVLDSSGVLVGEGFHARAGQ----PHAEVG-----ALAQAGAAARGGTIIVTLEPCC 85 Query: 84 -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 CA A+ A I R+ ++P G Q A E+ G+ E + Sbjct: 86 HHGRTPPCADAVIKAGIARVVVALTDPDPRVAGGGLQRLRDAG----VEVISGVLEAEAA 141 Query: 139 QIIQDF 144 F Sbjct: 142 HQNLAF 147 >gi|309791156|ref|ZP_07685688.1| hypothetical protein OSCT_1639 [Oscillochloris trichoides DG6] gi|308226718|gb|EFO80414.1| hypothetical protein OSCT_1639 [Oscillochloris trichoides DG6] Length = 196 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 53/150 (35%), Gaps = 13/150 (8%) Query: 8 MSCALEEAQNAALR-NEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M+ + A+ + P A + +++ NR +AHAEI+A+ + Sbjct: 34 MAQVIRFARLNFQQQTGGPFAAGIFERDSGRLVVIGVNRVVPCHCSSAHAEIMALSLAQH 93 Query: 65 ILSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 L L P + + PC MC A+ + +R + + P+ + + Sbjct: 94 RLGTYDLGAAGLPTHQIVINWRPCAMCFGALLWSGVRSVVIAGAGPELEALTGFDEGPIH 153 Query: 120 ATCHH-----SPEIYPGISEQRSRQIIQDF 144 H E+ + + + Q+F Sbjct: 154 PEWRHELERRGIELVEDVLHAEAIAVYQEF 183 >gi|75761016|ref|ZP_00741019.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74491502|gb|EAO54715.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 148 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 11/85 (12%) Query: 3 KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ A+ + + P VGAV V + I+ + + HAE+ A++ Sbjct: 54 TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 109 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM 85 M + + +YVTLEPC+ Sbjct: 110 MASQ-----NAKDATVYVTLEPCSH 129 >gi|85372857|ref|YP_456919.1| riboflavin-specific deaminase/reductase [Erythrobacter litoralis HTCC2594] gi|84785940|gb|ABC62122.1| riboflavin-specific deaminase/reductase [Erythrobacter litoralis HTCC2594] Length = 325 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 16/88 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VG + V +++I R R HAE A+ + +YVTLEPC Sbjct: 31 VGCIIVKQDRVIGRGWTRVGGR----PHAEAAALEQAGQ-----DARGATIYVTLEPCAH 81 Query: 84 -----TMCAAAISLARIRRLYYGASNPK 106 CA + AR +R+ +P Sbjct: 82 ESDRGPSCADLLVAARPQRVVLAEVDPD 109 >gi|302380955|ref|ZP_07269416.1| cytidine and deoxycytidylate deaminase zinc-binding region [Finegoldia magna ACS-171-V-Col3] gi|303235173|ref|ZP_07321793.1| cytidine and deoxycytidylate deaminase zinc-binding region [Finegoldia magna BVS033A4] gi|302311176|gb|EFK93196.1| cytidine and deoxycytidylate deaminase zinc-binding region [Finegoldia magna ACS-171-V-Col3] gi|302493765|gb|EFL53551.1| cytidine and deoxycytidylate deaminase zinc-binding region [Finegoldia magna BVS033A4] Length = 139 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 43/118 (36%), Gaps = 21/118 (17%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN--------------- 42 M+K FM AL A + VG V V +N+I+S N Sbjct: 1 MRKSWNEYFMDLALNVATRSTCDRAF-VGCVLVNSDNRIVSTGYNGAISGNPHCDEVGHT 59 Query: 43 RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ + + YVT PC C ++ A I ++YY Sbjct: 60 LRDGHCIATIHAEMNALLYCAKEGIA--VKGCICYVTHFPCLNCTKSLIQAGISKIYY 115 >gi|297588118|ref|ZP_06946762.1| competence protein ComEB [Finegoldia magna ATCC 53516] gi|297574807|gb|EFH93527.1| competence protein ComEB [Finegoldia magna ATCC 53516] Length = 139 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 43/118 (36%), Gaps = 21/118 (17%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN--------------- 42 M+K FM AL A + VG V V +N+I+S N Sbjct: 1 MRKSWNEYFMDLALNVATRSTCDRAF-VGCVLVNSDNRIVSTGYNGAISGNPHCDEVGHT 59 Query: 43 RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ + + YVT PC C ++ A I ++YY Sbjct: 60 LRDGHCIATIHAEMNALLYCAKEGIA--VKGCICYVTHFPCLNCTKSLIQAGISKIYY 115 >gi|219120746|ref|XP_002181105.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407821|gb|EEC47757.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 693 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 56/178 (31%), Gaps = 54/178 (30%) Query: 2 KKGNVFMSCALEEAQNAALRNEI------P-VGAVAV-LNNKIISRAGNRNRELKDVTAH 53 ++ +M A+ EA+ A + P VGAV V + +I+ +A + R D Sbjct: 97 RQDEEYMLSAILEAETAGGERGVASAFPKPTVGAVLVADDGRILGKARSDFR--NDAVR- 153 Query: 54 AEILAIRMGC-------RILSQE--------ILPEVDLYVTLEPC--------TMCAAAI 90 AI L LYVTLEP I Sbjct: 154 ---AAIAQAGLEVTPLSEWCVSWPSSEQLRKDLETSTLYVTLEPSSEREGTALPPITQLI 210 Query: 91 SLARIRRLYYGASNP------KGGGIENGTQFYTLATCHHSPEIYPG-ISEQRSRQII 141 L I R+ G ++P KG + E+ G + E+ +I Sbjct: 211 ELVGIPRVVIGCADPIQERHSKGAAALHSAGI----------EVRMGSVLEEECENLI 258 >gi|119356771|ref|YP_911415.1| CMP/dCMP deaminase, zinc-binding [Chlorobium phaeobacteroides DSM 266] gi|119354120|gb|ABL64991.1| CMP/dCMP deaminase, zinc-binding protein [Chlorobium phaeobacteroides DSM 266] Length = 173 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 43/120 (35%), Gaps = 27/120 (22%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------------- 42 FMS A ++ A +GAV V +N I+S N Sbjct: 29 EYFMSVAHLISRRATCTRAH-IGAVIVRDNNILSTGYNGAPSGLPHCDETNCRIYRSTHP 87 Query: 43 --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E T HAEI AI + + + D+Y+T PC C + I+ +YY Sbjct: 88 DGTVEENCVNTIHAEINAIAQAAKHGVS--IKDADIYITASPCIHCLKVLINVGIKTIYY 145 >gi|110801506|ref|YP_698456.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens SM101] gi|110682007|gb|ABG85377.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens SM101] Length = 166 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 45/122 (36%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + FM AL A+ + P VGA V +NKI+ N Sbjct: 9 ISWDEYFMGVALISAKRSKD----PNTQVGACIVDNDNKIVGIGYNGFPKGCSDDDLPWG 64 Query: 43 ---RNRELKDVTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 E K A HAE+ AI + + + +Y TL PC CA AI A I + Sbjct: 65 NKGEFLETKYPYACHAELNAILN----STGKNVKNCRVYATLFPCNECAKAIIQAGITEV 120 Query: 99 YY 100 Y Sbjct: 121 IY 122 >gi|224419196|ref|ZP_03657202.1| putative riboflavin-specific deaminase [Helicobacter canadensis MIT 98-5491] gi|253828126|ref|ZP_04871011.1| Riboflavin biosynthesis protein RibD [Helicobacter canadensis MIT 98-5491] gi|313142700|ref|ZP_07804893.1| riboflavin biosynthesis protein RibD [Helicobacter canadensis MIT 98-5491] gi|253511532|gb|EES90191.1| Riboflavin biosynthesis protein RibD [Helicobacter canadensis MIT 98-5491] gi|313131731|gb|EFR49348.1| riboflavin biosynthesis protein RibD [Helicobacter canadensis MIT 98-5491] Length = 346 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 36/153 (23%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57 M N ++ A++EA + VGA+ + N +I++ ++ HAE+L Sbjct: 1 MVDDNFYLELAIKEAWKTQCQTLPNPAVGALILDHNGRILALQAHQEAGK----PHAEVL 56 Query: 58 AIRMG----------------------CRILSQEILPEVDLYVTLEPC------TMCAAA 89 A++ + + + LYVTLEPC CAA Sbjct: 57 ALKEAYFNLTQDSNILPLEQSIQIHEYLKQKAHSLFHNATLYVTLEPCMHEGKTPSCAAL 116 Query: 90 ISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + I++L G +P G ++ C Sbjct: 117 LESLGIKKLIIGTKDPNPKAQG-GAEYLQQRGC 148 >gi|99081975|ref|YP_614129.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Ruegeria sp. TM1040] gi|99038255|gb|ABF64867.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Ruegeria sp. TM1040] Length = 358 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 46/146 (31%), Gaps = 21/146 (14%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL + R VG V V +++ R + HAE + Sbjct: 1 MGLALSLGRRGQGRTWPNPAVGCVIVQKGRVVGRGWTQPGGR----PHAEPM-----ALA 51 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + YV+LEPC CA A+ A + R+ + G + Sbjct: 52 QAGAAARGATAYVSLEPCAHHGKTPPCAQALIEAGVARVVAAIEDSDPRVSGQGFEMLRA 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145 A + G+ + + + FF Sbjct: 112 AG----ISVTTGVRAEEAGFDHEGFF 133 >gi|240172784|ref|ZP_04751443.1| bifunctional riboflavin biosynthesis protein RibG [Mycobacterium kansasii ATCC 12478] Length = 339 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 58/152 (38%), Gaps = 24/152 (15%) Query: 8 MSCALEEAQ--NAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A++++ + PVGAV V +++ G + D HAE++ Sbjct: 13 MRLAIDQSYLVKGSTYPNPPVGAVIVDTEGRVVGVGGTQP-TGGD---HAEVV-----AL 63 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + + VT+EPC C A+ AR+ + YG ++P G + Sbjct: 64 RRAGGLAAGAIAVVTMEPCNHYGKTPPCVNALIEARVGTVIYGVADPNGIAGGGAGRLSA 123 Query: 119 LATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149 ++ G+ + ++++ ++R Sbjct: 124 A-----GVQVRSGVLADHVAAGPLREWLHKQR 150 >gi|238878198|gb|EEQ41836.1| deoxycytidylate deaminase [Candida albicans WO-1] Length = 337 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 31/123 (25%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGN---RNRELKD--------- 49 + FM A + A A N + VG V V N++++ N R+ + Sbjct: 189 DSYFMRLA-DLA--ALRSNCMKRRVGCVIVRENRVVATGYNGTPRHLTNCNEGGCSRCNK 245 Query: 50 --------VT---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 T HAE A+ R I E LY PC C+ I + IR + Sbjct: 246 GQGSGASLATCLCLHAEENALLEAGR---DRIRGESVLYCNTCPCLTCSIKIVQSGIREV 302 Query: 99 YYG 101 Y Sbjct: 303 VYA 305 >gi|221058419|ref|XP_002259855.1| cytidine and deoxycytidylate deaminase family [Plasmodium knowlesi strain H] gi|193809928|emb|CAQ41122.1| cytidine and deoxycytidylate deaminase family,putative [Plasmodium knowlesi strain H] Length = 245 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 37/78 (47%) Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 E L + + VT EPC MC A+ L IR +Y+ N + GG + + + I Sbjct: 152 ENLRKCCIVVTCEPCIMCVYALKLMGIRNIYFCCLNERFGGCGSVLSLHKTYQDINVNYI 211 Query: 129 YPGISEQRSRQIIQDFFK 146 G +RS ++Q F+K Sbjct: 212 KSGGCTERSISLMQSFYK 229 Score = 51.4 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Query: 2 KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILA 58 + F++ ALEEA+ + E+P+ + + +I+S + N E K+ + H E++ Sbjct: 7 EDAIHFLNIALEEAEKSLKVELKEMPIFCLLINEKREILSSSYNHTNESKNGSRHCELIT 66 Query: 59 IRM 61 I Sbjct: 67 IDK 69 >gi|71904197|ref|YP_281000.1| ComE operon protein 2 [Streptococcus pyogenes MGAS6180] gi|251783268|ref|YP_002997573.1| ComE operon protein 2 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|71803292|gb|AAX72645.1| ComE operon protein 2 [Streptococcus pyogenes MGAS6180] gi|242391900|dbj|BAH82359.1| ComE operon protein 2 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323127992|gb|ADX25289.1| ComE operon protein 2 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 155 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V +N+II+ N D T HAE+ A+ + Sbjct: 29 VGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEDGHCIRTVHAEMNALIQCAKEGISTD 88 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++YVT PC C A+ A I+++ Y Sbjct: 89 --GTEIYVTHFPCINCTKALLQAGIKKITY 116 >gi|68482051|ref|XP_715043.1| hypothetical protein CaO19.7243 [Candida albicans SC5314] gi|46436646|gb|EAK96005.1| hypothetical protein CaO19.7243 [Candida albicans SC5314] Length = 337 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 31/123 (25%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGN---RNRELKD--------- 49 + FM A + A A N + VG V V N++++ N R+ + Sbjct: 189 DSYFMRLA-DLA--ALRSNCMKRRVGCVIVRENRVVATGYNGTPRHLTNCNEGGCSRCNK 245 Query: 50 --------VT---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 T HAE A+ R I E LY PC C+ I + IR + Sbjct: 246 GQGSGASLATCLCLHAEENALLEAGR---DRIRGESVLYCNTCPCLTCSIKIVQSGIREV 302 Query: 99 YYG 101 Y Sbjct: 303 VYA 305 >gi|311113483|ref|YP_003984705.1| riboflavin biosynthesis protein RibD [Rothia dentocariosa ATCC 17931] gi|310944977|gb|ADP41271.1| riboflavin biosynthesis protein RibD [Rothia dentocariosa ATCC 17931] Length = 415 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 55/157 (35%), Gaps = 20/157 (12%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 + MS A+E A+ VGAV +++ +R T HAE + Sbjct: 43 TDDRAMSLAIEAARQGIRGANPLVGAVITNSAGQVLHIGWHR----GAGTPHAEADVLAQ 98 Query: 62 GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115 R + + +YV+LEPC C+ AI A I +++Y + Sbjct: 99 A-RAAGT-DMSDAKMYVSLEPCNHTGKTGPCSHAIKEAGISQVFYAYPDRSAQASGGAEY 156 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149 H Y + S + + +F E+R Sbjct: 157 L----RSHGVVTTYMREFAEDSYALNERWFISVAEKR 189 >gi|78186601|ref|YP_374644.1| deoxycytidylate deaminase, putative [Chlorobium luteolum DSM 273] gi|78166503|gb|ABB23601.1| deoxycytidylate deaminase, putative [Chlorobium luteolum DSM 273] Length = 187 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 43/121 (35%), Gaps = 27/121 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42 FMS A ++ A +GAV V ++ I+S N Sbjct: 36 HEYFMSVAHLISRRATCTRGH-IGAVIVRDHSILSTGYNGAPSGLPHCNETNCRIYRSTH 94 Query: 43 ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 E T HAEI AI + + + D+Y+T PC C + I+ +Y Sbjct: 95 PDGTVEENCVNTIHAEINAIAQAAKHGVS--ISDSDIYITASPCIHCLKVLINVGIKTIY 152 Query: 100 Y 100 Y Sbjct: 153 Y 153 >gi|330804193|ref|XP_003290082.1| hypothetical protein DICPUDRAFT_154567 [Dictyostelium purpureum] gi|325079791|gb|EGC33374.1| hypothetical protein DICPUDRAFT_154567 [Dictyostelium purpureum] Length = 321 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 46/122 (37%), Gaps = 15/122 (12%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 N ++ N ++ +H EI+AI + + LY T EPC MCA+A+ Sbjct: 89 NGTLMCTGVNM--GKPNIISHGEIVAINNCTAMHGITVFTNYTLYTTGEPCAMCASALLW 146 Query: 93 ARIRRLYYGASNPKGGG--------IENGTQFYTLATCHH-SPEIYPGISEQRSRQIIQD 143 A + + +G N +++ F +P + G+ ++ Sbjct: 147 ADFKTIVWGTYNADLLCKICMSNIPMDSAYIFGRYYGLRSTAPRVIGGVLRSQADA---- 202 Query: 144 FF 145 FF Sbjct: 203 FF 204 >gi|317122494|ref|YP_004102497.1| CMP/dCMP deaminase zinc-binding protein [Thermaerobacter marianensis DSM 12885] gi|315592474|gb|ADU51770.1| CMP/dCMP deaminase zinc-binding protein [Thermaerobacter marianensis DSM 12885] Length = 171 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 40/128 (31%), Gaps = 24/128 (18%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGN---------------RNR 45 FM A A+ + P VGAV V + +I++ N Sbjct: 26 DAYFMELAEVVAKRSTC----PRRHVGAVLVRDRRILATGYNGAPPGFPHCTDEGCLMQD 81 Query: 46 ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 T HAE AI LY T PC CA + A + R+ Y P Sbjct: 82 GHCVRTIHAEANAILQAALHGVTVR--GSTLYTTATPCLHCAKLLIGAGVVRVVYRDWYP 139 Query: 106 KGGGIENG 113 +E Sbjct: 140 DPQAVEFL 147 >gi|209879740|ref|XP_002141310.1| cytidine/deoxycytidylate deaminase family protein [Cryptosporidium muris RN66] gi|209556916|gb|EEA06961.1| cytidine/deoxycytidylate deaminase family protein [Cryptosporidium muris RN66] Length = 314 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 35/137 (25%) Query: 27 GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-------------LPE 73 G V VLN+ +I ++ H I AIR L L Sbjct: 173 GCVIVLNDIVIGYGLDKRHVSY-PWDHPAIDAIRNTSDKLKASRDVRSMGNKSPGSNLSN 231 Query: 74 ------------------VD---LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 Y++ EPC C+ A+ +RI +++Y +N + GG+ + Sbjct: 232 VNSILTNSYRVLLNQQYLCTSAIAYLSHEPCVSCSMALLHSRISQVFYEYTNNESGGLGS 291 Query: 113 GTQFYTLATCHHSPEIY 129 + + + + +H ++ Sbjct: 292 RCKLHCITSLNHHFTVF 308 >gi|294657495|ref|XP_459803.2| DEHA2E11374p [Debaryomyces hansenii CBS767] gi|199432736|emb|CAG88042.2| DEHA2E11374p [Debaryomyces hansenii] Length = 582 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 12/112 (10%) Query: 4 GNVFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 +M ALE A + + VGAV V N ++++ +R HAE A+ Sbjct: 433 HRKYMELALEMANKCGETQTQFNVGAVLVNNGEVLATGHSRELPGN---THAEQCALEKY 489 Query: 63 CRILSQEILP-EVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPK 106 + +P ++Y T+EPC C I I+ + G P Sbjct: 490 FEQTGKREVPAGTEIYTTMEPCSLRLSGNLPCVDRILETNIKTCFVGVVEPD 541 >gi|310796661|gb|EFQ32122.1| cytidine and deoxycytidylate deaminase zinc-binding region [Glomerella graminicola M1.001] Length = 237 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 15/90 (16%) Query: 26 VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI----------LPE 73 GA+ V + ++++ N D T H EI AI C + + Sbjct: 65 FGAIIVNHTSDEVVCEGANFR--TGDPTIHGEISAI-NACTAKVTKQGMTPTEIFAAWGD 121 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + +Y E C MCA+AI A + YG + Sbjct: 122 LSIYTNAESCPMCASAIRWAGFKEYVYGTT 151 >gi|310821757|ref|YP_003954115.1| cytidine and deoxycytidylate deaminase zinc-binding domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309394829|gb|ADO72288.1| Cytidine and deoxycytidylate deaminase zinc-binding domain protein [Stigmatella aurantiaca DW4/3-1] Length = 149 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 20/120 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---LKD----------- 49 FM A + A A + VGA+ V + I+S N + D Sbjct: 8 DQYFMDIARQVASRATCDRKH-VGALLVRDRTILSTGYNGSIRGLPHCDDVGHMMENGHC 66 Query: 50 -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG--ASNPK 106 T HAE AI + + +Y T PC C I+ + R+ +G +P+ Sbjct: 67 VATVHAEANAIIQAAKNGVS--IDGATIYTTASPCWPCFKLIANSGCVRIVFGEFYRDPR 124 >gi|150005156|ref|YP_001299900.1| deoxycytidylate deaminase [Bacteroides vulgatus ATCC 8482] gi|212694623|ref|ZP_03302751.1| hypothetical protein BACDOR_04153 [Bacteroides dorei DSM 17855] gi|237711112|ref|ZP_04541593.1| deoxycytidylate deaminase [Bacteroides sp. 9_1_42FAA] gi|237727465|ref|ZP_04557946.1| deoxycytidylate deaminase [Bacteroides sp. D4] gi|254883290|ref|ZP_05256000.1| deoxycytidylate deaminase [Bacteroides sp. 4_3_47FAA] gi|265750698|ref|ZP_06086761.1| deoxycytidylate deaminase [Bacteroides sp. 3_1_33FAA] gi|294777766|ref|ZP_06743212.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides vulgatus PC510] gi|319642664|ref|ZP_07997310.1| deoxycytidylate deaminase [Bacteroides sp. 3_1_40A] gi|149933580|gb|ABR40278.1| deoxycytidylate deaminase [Bacteroides vulgatus ATCC 8482] gi|212663124|gb|EEB23698.1| hypothetical protein BACDOR_04153 [Bacteroides dorei DSM 17855] gi|229434321|gb|EEO44398.1| deoxycytidylate deaminase [Bacteroides dorei 5_1_36/D4] gi|229454956|gb|EEO60677.1| deoxycytidylate deaminase [Bacteroides sp. 9_1_42FAA] gi|254836083|gb|EET16392.1| deoxycytidylate deaminase [Bacteroides sp. 4_3_47FAA] gi|263237594|gb|EEZ23044.1| deoxycytidylate deaminase [Bacteroides sp. 3_1_33FAA] gi|294448354|gb|EFG16908.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides vulgatus PC510] gi|317385752|gb|EFV66685.1| deoxycytidylate deaminase [Bacteroides sp. 3_1_40A] Length = 144 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 32/112 (28%), Positives = 44/112 (39%), Gaps = 15/112 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT- 51 +K ++ A A+N+ VGA+ V + IIS N + VT Sbjct: 9 LKLDKRYIRMASIWAENSYCER-RQVGALIVKDKMIISDGYNGTPAGFENVCEDDNGVTK 67 Query: 52 ---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI R + +YVT PC CA I A I+R+ Y Sbjct: 68 PYVLHAEANAITKIARSNNSSD--GATMYVTASPCIECAKLIIQAGIKRVVY 117 >gi|83593160|ref|YP_426912.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Rhodospirillum rubrum ATCC 11170] gi|83576074|gb|ABC22625.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Rhodospirillum rubrum ATCC 11170] Length = 367 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 45/146 (30%), Gaps = 22/146 (15%) Query: 8 MSCALEEAQNAALR--NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M AL A R VG V V +++ R + HAE A+ Sbjct: 1 MRTALGLAARGLGRVWPNPAVGCVLVDAQGRVVGRGWTQPGGR----PHAEREALDRAGA 56 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 YVTLEPC CA A+ A + R+ +P G Sbjct: 57 AARGAT-----AYVTLEPCSHHGKTPPCADALIDAGVVRVVAALGDPDPRVSGRGFAQLR 111 Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144 A + G+ +R + F Sbjct: 112 AAG----VVVETGLLVDEARALNLGF 133 >gi|297200713|ref|ZP_06918110.1| bifunctional enzyme deaminase/reductase [Streptomyces sviceus ATCC 29083] gi|197712280|gb|EDY56314.1| bifunctional enzyme deaminase/reductase [Streptomyces sviceus ATCC 29083] Length = 375 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 26/128 (20%) Query: 4 GNVFMSCALEEA------QNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEI 56 + +++ A E A Q A VGAV V + ++R +R E D HAE Sbjct: 231 DHHWLALACELATRCPPSQTAFS-----VGAVVVAADGTELARGHSR--EGDDPVVHAEE 283 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPK--- 106 A+ + L +Y +LEPCT CA I A +RR+ P Sbjct: 284 AAL--AKIDPADPRLATATVYTSLEPCTHRASRPAPCARLILDAGVRRVVTAWREPDTFV 341 Query: 107 GGGIENGT 114 G GT Sbjct: 342 AGADGTGT 349 >gi|295425707|ref|ZP_06818394.1| deoxycytidylate deaminase [Lactobacillus amylolyticus DSM 11664] gi|295064723|gb|EFG55644.1| deoxycytidylate deaminase [Lactobacillus amylolyticus DSM 11664] Length = 160 Score = 71.9 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 18/111 (16%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV---------- 50 FM AL AQ + + VG+V V +N+II N + + DV Sbjct: 9 QYFMMQALVIAQRSTCNRAL-VGSVLVRDNRIIGTGYNGSISRQPHCDDVGHQMVDGHCV 67 Query: 51 -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H+E+ ++ + ++YVT PC C A+ A ++R+ Y Sbjct: 68 RTIHSEMNSLIQCAKNGVSTD--GTEIYVTHFPCYNCTKALVQAGVKRINY 116 >gi|332005965|gb|AED93348.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis thaliana] Length = 404 Score = 71.5 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 36/71 (50%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 D+++ LEPCTMCA A+ RI+R++Y N GG+ + + + +H ++ Sbjct: 332 TGYDIFLLLEPCTMCAMALVHQRIKRIFYAFPNTTAGGLGSVHRLQGEKSLNHHYAVFRV 391 Query: 132 ISEQRSRQIIQ 142 + + + + Sbjct: 392 LLPDDALRQMT 402 >gi|110736606|dbj|BAF00268.1| hypothetical protein [Arabidopsis thaliana] Length = 226 Score = 71.5 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 36/71 (50%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 D+++ LEPCTMCA A+ RI+R++Y N GG+ + + + +H ++ Sbjct: 154 TGYDIFLLLEPCTMCAMALVHQRIKRIFYAFPNTTAGGLGSVHRLQGEKSLNHHYAVFRV 213 Query: 132 ISEQRSRQIIQ 142 + + + + Sbjct: 214 LLPDDALRQMT 224 >gi|53749134|gb|AAU90052.1| At5g24670 [Arabidopsis thaliana] gi|55733733|gb|AAV59263.1| At5g24670 [Arabidopsis thaliana] Length = 400 Score = 71.5 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 36/71 (50%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 D+++ LEPCTMCA A+ RI+R++Y N GG+ + + + +H ++ Sbjct: 328 TGYDIFLLLEPCTMCAMALVHQRIKRIFYAFPNTTAGGLGSVHRLQGEKSLNHHYAVFRV 387 Query: 132 ISEQRSRQIIQ 142 + + + + Sbjct: 388 LLPDDALRQMT 398 >gi|79519581|ref|NP_197855.3| catalytic/ hydrolase/ zinc ion binding [Arabidopsis thaliana] gi|332005964|gb|AED93347.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis thaliana] Length = 400 Score = 71.5 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 36/71 (50%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 D+++ LEPCTMCA A+ RI+R++Y N GG+ + + + +H ++ Sbjct: 328 TGYDIFLLLEPCTMCAMALVHQRIKRIFYAFPNTTAGGLGSVHRLQGEKSLNHHYAVFRV 387 Query: 132 ISEQRSRQIIQ 142 + + + + Sbjct: 388 LLPDDALRQMT 398 >gi|330507911|ref|YP_004384339.1| dCMP deaminase [Methanosaeta concilii GP-6] gi|328928719|gb|AEB68521.1| dCMP deaminase [Methanosaeta concilii GP-6] Length = 153 Score = 71.5 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 24/118 (20%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 FM A+ A+ + VGA+ V N +I++ N ++ Sbjct: 10 DEYFMEIAIVVAKRSTCLRNQ-VGALFVKNKRILTTGYNGAPAGLDHCDVVGCAREGVQS 68 Query: 50 VTAH-------AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H AE AI + + LY T +PC +CA + AR+ ++ Y Sbjct: 69 GTRHELCRAVHAEQNAIIQAA--MHGISIEGATLYCTHQPCILCAKMMINARVAKVVY 124 >gi|320547474|ref|ZP_08041760.1| competence protein comEB [Streptococcus equinus ATCC 9812] gi|320447819|gb|EFW88576.1| competence protein comEB [Streptococcus equinus ATCC 9812] Length = 154 Score = 71.5 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V +N+II+ N D T HAE+ A+ + Sbjct: 29 VGAVLVKDNRIIATGYNGGVSETDNCSEAGHKMEDGHCIRTVHAEMNALIQCAKEGIST- 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++YVT PC C A+ A I+++ Y Sbjct: 88 -KGTEIYVTHFPCINCTKALLQAGIKKITY 116 >gi|257437839|ref|ZP_05613594.1| putative deoxycytidylate deaminase [Faecalibacterium prausnitzii A2-165] gi|257199499|gb|EEU97783.1| putative deoxycytidylate deaminase [Faecalibacterium prausnitzii A2-165] Length = 168 Score = 71.5 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 41/122 (33%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGNRN-----------R 45 + FM AL A + P VGA V NKI+S N Sbjct: 16 INWDEYFMGIALLTAMRSKD----PSSQVGACIVSPENKILSLGYNGMPIGCDDDAMPWE 71 Query: 46 ELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 D HAE+ AI L +YVTL PC CA AI + I + Sbjct: 72 REGDPLDTKYMYVCHAELNAILNSAHN----NLKGARVYVTLFPCNECAKAIIQSGISEV 127 Query: 99 YY 100 Y Sbjct: 128 VY 129 >gi|20089035|ref|NP_615110.1| dCMP deaminase [Methanosarcina acetivorans C2A] gi|19913892|gb|AAM03590.1| dCMP deaminase [Methanosarcina acetivorans C2A] Length = 150 Score = 71.5 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 46/127 (36%), Gaps = 26/127 (20%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN----------------RNREL 47 F+ A A+ A VGAV + + +I+S N ++ Sbjct: 8 DEYFLEIAFAVARRATCLRSN-VGAVIMRDKRILSTGYNGAPSGLEHCLEIECIRDLEKI 66 Query: 48 KDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE AI + + +Y T +PCT+CA I + I+++ Y Sbjct: 67 ISGTQKEKCRAVHAEQNAIIQAA--IHGVSIAGATIYCTQQPCTLCAKMIINSNIKKVVY 124 Query: 101 GASNPKG 107 +P Sbjct: 125 STPDPDT 131 >gi|311031602|ref|ZP_07709692.1| hypothetical protein Bm3-1_13811 [Bacillus sp. m3-13] Length = 190 Score = 71.5 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 44/116 (37%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------D 49 + FM+ + A + + VGA V + +II+ N + D Sbjct: 5 ISWDQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGVHCIDEGCYVID 63 Query: 50 ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ + ++YVT PC C AI A I+ +YY Sbjct: 64 NHCVRTIHAEMNALLQCSKFGVPT--TGAEIYVTHFPCLHCCKAIIQAGIKTVYYA 117 >gi|302384784|ref|YP_003820606.1| dCMP deaminase [Clostridium saccharolyticum WM1] gi|302195412|gb|ADL02983.1| dCMP deaminase [Clostridium saccharolyticum WM1] Length = 164 Score = 71.5 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 49/128 (38%), Gaps = 33/128 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + FM A ++ + P VGA V +NKI+S N Sbjct: 9 ITWDEYFMGVAALSSKRSKD----PSTQVGACIVSQDNKILSMGYNGFPMGCSDDEFPWD 64 Query: 43 RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 R E +D + H+E+ AI L LYVTL PC CA AI A I Sbjct: 65 RENEQEDPYNAKYFYSTHSELNAILN----YRGGSLEGSKLYVTLFPCNECAKAIIQAGI 120 Query: 96 RRLYYGAS 103 + + YG+ Sbjct: 121 KTIVYGSD 128 >gi|156059474|ref|XP_001595660.1| hypothetical protein SS1G_03749 [Sclerotinia sclerotiorum 1980] gi|154701536|gb|EDO01275.1| hypothetical protein SS1G_03749 [Sclerotinia sclerotiorum 1980 UF-70] Length = 380 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 61/173 (35%), Gaps = 55/173 (31%) Query: 5 NVFMSCALEEAQNAALRN-EIPVGAVAV--LNN--KIISRAGNRN------RELKDVTAH 53 +M A E A ++ +GAV V N + ++ AG+ +VTAH Sbjct: 184 QKWMDLAAEVAHLSSTAGLGEQIGAVIVERKNGVARTLALAGDARWMNWPRVGSGNVTAH 243 Query: 54 AEILAIRMGC------------------------------------------RILSQEIL 71 A + AI M + + Sbjct: 244 AALRAIAMVADGIKIQEEKKAGTESEEGTSNEQMIFRDQPLDTLEAKHHKSAEWVDGYLC 303 Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE--NGTQFYTLATC 122 E++LY+T EPC MC+ AI +R R+ +G PK GG+ N Y A+ Sbjct: 304 HELELYMTHEPCVMCSMAIVHSRFGRVVFGHRMPKTGGLCADNLLDLYMPASM 356 >gi|168207992|ref|ZP_02633997.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens E str. JGS1987] gi|168210758|ref|ZP_02636383.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens B str. ATCC 3626] gi|168217464|ref|ZP_02643089.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens NCTC 8239] gi|169342382|ref|ZP_02863448.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens C str. JGS1495] gi|182626202|ref|ZP_02953960.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens D str. JGS1721] gi|169299502|gb|EDS81566.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens C str. JGS1495] gi|170660714|gb|EDT13397.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens E str. JGS1987] gi|170711173|gb|EDT23355.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens B str. ATCC 3626] gi|177908466|gb|EDT70999.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens D str. JGS1721] gi|182380416|gb|EDT77895.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens NCTC 8239] Length = 166 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 45/122 (36%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + FM AL A+ + P VGA V +NKI+ N Sbjct: 9 ISWDEYFMGVALISAKRSKD----PNTQVGACIVDNDNKIVGIGYNGFPKGCSDDDLPWG 64 Query: 43 ---RNRELKDVTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 E K A HAE+ AI + + + +Y TL PC CA AI A I + Sbjct: 65 NKGDFLETKYPYACHAELNAILN----STGKNVKNCRVYATLFPCNECAKAIIQAGITEV 120 Query: 99 YY 100 Y Sbjct: 121 IY 122 >gi|115931277|ref|XP_001180302.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 708 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 27/128 (21%) Query: 26 VGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS---------------- 67 +GA+ V ++ + + ++ HA + I + Sbjct: 565 IGALIVDPKSDTTLGMTSSVPGIGENSLQHAVMKCIDLVAHSQGGGAWSICPESCYESVN 624 Query: 68 --------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + DLY+T EPC MCA A+ +RIRR++Y S+P G + + + + Sbjct: 625 GECSTDETPYLCTGFDLYITQEPCVMCAMALVHSRIRRVFYIDSHPD-GALGSRYKLHAE 683 Query: 120 ATCHHSPE 127 ++ +H + Sbjct: 684 SSLNHRYQ 691 >gi|110801187|ref|YP_695768.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens ATCC 13124] gi|168215286|ref|ZP_02640911.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens CPE str. F4969] gi|110675834|gb|ABG84821.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens ATCC 13124] gi|170713327|gb|EDT25509.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens CPE str. F4969] Length = 166 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 45/122 (36%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + FM AL A+ + P VGA V +NKI+ N Sbjct: 9 ISWDEYFMGVALISAKRSKD----PNTQVGACIVDNDNKIVGIGYNGFPKGCSDDDLPWG 64 Query: 43 ---RNRELKDVTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 E K A HAE+ AI + + + +Y TL PC CA AI A I + Sbjct: 65 NKGDFLETKYPYACHAELNAILN----STGKNVKNCRVYATLFPCNECAKAIIQAGITEV 120 Query: 99 YY 100 Y Sbjct: 121 IY 122 >gi|18310048|ref|NP_561982.1| cytidine/deoxycytidylate deaminase family protein [Clostridium perfringens str. 13] gi|18144727|dbj|BAB80772.1| deoxycytidylate deaminase [Clostridium perfringens str. 13] Length = 166 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 45/122 (36%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + FM AL A+ + P VGA V +NKI+ N Sbjct: 9 ISWDEYFMGVALISAKRSKD----PNTQVGACIVDNDNKIVGIGYNGFPKGCSDDDLPWG 64 Query: 43 ---RNRELKDVTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 E K A HAE+ AI + + + +Y TL PC CA AI A I + Sbjct: 65 NKGDFLETKYPYACHAELNAILN----STGKNVKNCRVYATLFPCNECAKAIIQAGITEV 120 Query: 99 YY 100 Y Sbjct: 121 IY 122 >gi|255947438|ref|XP_002564486.1| Pc22g04480 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591503|emb|CAP97736.1| Pc22g04480 [Penicillium chrysogenum Wisconsin 54-1255] Length = 170 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 32/82 (39%), Gaps = 5/82 (6%) Query: 25 PVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 P A+ + +N+ I + N HAE R L L T EPC Sbjct: 38 PFAAILLAPDNETILLSSN----SLSHVRHAESELARNAADNYDWAYLARCTLVSTWEPC 93 Query: 84 TMCAAAISLARIRRLYYGASNP 105 MCA AI A I RL Y AS Sbjct: 94 AMCAGAIYWAHIGRLVYMASEK 115 >gi|126653876|ref|ZP_01725723.1| late competence protein ComEB [Bacillus sp. B14905] gi|126589601|gb|EAZ83740.1| late competence protein ComEB [Bacillus sp. B14905] Length = 189 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 18/118 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49 + FM+ + A + + VGA V + +II+ N + + Sbjct: 4 ITWDQFFMAQSHLLALRSTCTR-LAVGATVVRDKRIIAGGYNGSITGDEHCIEKGCYVVD 62 Query: 50 ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 T HAE+ A+ C DLYVT PC C +I A I R+ Y Sbjct: 63 NHCVRTVHAEMNALLQ-CAKYGTPT-KGADLYVTHFPCLPCTKSIIQAGIERVCYATD 118 >gi|82791814|gb|ABB90836.1| putative bifunctional enzyme deaminase/reductase [Streptomyces davawensis] Length = 375 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 44/118 (37%), Gaps = 23/118 (19%) Query: 4 GNVFMSCALEEAQN------AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEI 56 + ++ A E A+ A VGAV V + ++R +R E D HAE Sbjct: 230 DHHWLRLACELAELCPPSETAFS-----VGAVVVAADGTELARGHSR--EGTDPVVHAEE 282 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPKG 107 A+ LP +Y +LEPC CA I A +RR+ P Sbjct: 283 AAL--AKIDPEDPRLPSATVYSSLEPCAHRSSRPAPCARLILDAGVRRVVTAWREPDT 338 >gi|323340654|ref|ZP_08080906.1| competence protein comEB [Lactobacillus ruminis ATCC 25644] gi|323091777|gb|EFZ34397.1| competence protein comEB [Lactobacillus ruminis ATCC 25644] Length = 159 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 20/116 (17%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV---------- 50 + FM A+ + + + VGA+ V +N+II+ N + DV Sbjct: 6 ISWNQYFMLQAILLSLRSTCTR-LAVGAILVRDNRIIAGGYNGSVS-GDVHCLDEGCYVV 63 Query: 51 ------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ + S +YVT PC C + A I+++YY Sbjct: 64 DGHCVRTIHAEMNAVLQCAKFGSGTD--GAVIYVTDFPCLQCTKMLLQAGIKKIYY 117 >gi|171779275|ref|ZP_02920246.1| hypothetical protein STRINF_01123 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282331|gb|EDT47758.1| hypothetical protein STRINF_01123 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 154 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V +N+II+ N D T HAE+ A+ + Sbjct: 29 VGAVLVKDNRIIATGYNGGVSETDNCSEAGHKMEDGHCIRTVHAEMNALIQCAKEGIST- 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++YVT PC C A+ A I+++ Y Sbjct: 88 -KGTEIYVTHFPCINCTKALLQAGIKKITY 116 >gi|261335602|emb|CBH18596.1| deaminase, putative [Trypanosoma brucei gambiense DAL972] Length = 365 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 36/64 (56%) Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + + +D++V+ EPC MC+ A+ +R+RR++Y NP GG+ + + + +H Sbjct: 274 DASYLANGMDMFVSHEPCVMCSMALVHSRVRRVFYCFPNPVHGGLGSTVSIHAIQELNHH 333 Query: 126 PEIY 129 ++ Sbjct: 334 FRVF 337 >gi|193636783|ref|XP_001945167.1| PREDICTED: deoxycytidylate deaminase-like [Acyrthosiphon pisum] Length = 220 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 43/123 (34%), Gaps = 31/123 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPV---GAVAVLNNK-IISRAGNR----------NRE 46 + + FM+ A A+ + PV GA V +K I+ N Sbjct: 47 LSWDDFFMATAFLVAKRSKD----PVTQVGACIVTPDKKIVGTGYNGMPIGCNDDNFPWG 102 Query: 47 LKDVT---------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 + + HAE+ A+ + + +YV L PC CA I + I+ Sbjct: 103 KNNPSKLENKYFYVCHAEMNAVLN----KNSMDVRNCTIYVALFPCNECAKIIIQSGIKE 158 Query: 98 LYY 100 + Y Sbjct: 159 VVY 161 >gi|66808325|ref|XP_637885.1| hypothetical protein DDB_G0286161 [Dictyostelium discoideum AX4] gi|60466312|gb|EAL64373.1| hypothetical protein DDB_G0286161 [Dictyostelium discoideum AX4] Length = 422 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 8/104 (7%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 ++K +FM ALE A + ++ ++ V +++++ ++ H+E++AI Sbjct: 65 LEKHEMFMKIALEIAIKSKVK----FVSIIVSPDDRVLCSG---IFSKENAILHSELVAI 117 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 +Y T EP ++ ++AI AR +++ YG+S Sbjct: 118 TNCSSSHKMVTFENHTIYSTAEPDSLSSSAIVWARFKQVVYGSS 161 >gi|158286349|ref|XP_308696.4| AGAP007066-PA [Anopheles gambiae str. PEST] gi|157020426|gb|EAA03932.5| AGAP007066-PA [Anopheles gambiae str. PEST] Length = 380 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 33/66 (50%) Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + D+Y+T EPC MCA A+ +R+RR+++ P G + + + + + Sbjct: 312 AKYGPYLCTGYDVYLTHEPCIMCAMALVHSRVRRVFFHRPTPGRGALGTLMKLHAVKELN 371 Query: 124 HSPEIY 129 H E++ Sbjct: 372 HHYEVF 377 >gi|149239664|ref|XP_001525708.1| deoxycytidylate deaminase [Lodderomyces elongisporus NRRL YB-4239] gi|146451201|gb|EDK45457.1| deoxycytidylate deaminase [Lodderomyces elongisporus NRRL YB-4239] Length = 339 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 31/123 (25%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGN---------------RNRE 46 + FM A + A A N + VG V V N++++ N R + Sbjct: 191 DSYFMRLA-DLA--ALRSNCMKRRVGCVIVRENRVVATGYNGTPRHLLNCNEGGCSRCNQ 247 Query: 47 LKDVTA--------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + A HAE A+ R I E LY PC C+ I + IR + Sbjct: 248 GQGSGANLSTCLCLHAEENALLEAGR---DRIRDESVLYCNTCPCLTCSIKIVQSGIREV 304 Query: 99 YYG 101 Y Sbjct: 305 VYA 307 >gi|194336940|ref|YP_002018734.1| CMP/dCMP deaminase zinc-binding [Pelodictyon phaeoclathratiforme BU-1] gi|194309417|gb|ACF44117.1| CMP/dCMP deaminase zinc-binding [Pelodictyon phaeoclathratiforme BU-1] Length = 177 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 42/120 (35%), Gaps = 27/120 (22%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------------- 42 FMS A ++ A +GAV V N I+S N Sbjct: 30 EYFMSVAHLISRRATCTRGH-IGAVIVRENSILSTGYNGAPSGLPHCNESNCRIYRSIHP 88 Query: 43 --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E T HAEI AI + + + D+Y+T PC C + I+ +YY Sbjct: 89 DGTVEENCVNTIHAEINAIAQAAKHGVS--IKDSDIYITASPCIHCLKVLINVGIKTIYY 146 >gi|21227525|ref|NP_633447.1| dCMP deaminase [Methanosarcina mazei Go1] gi|20905903|gb|AAM31119.1| dCMP deaminase [Methanosarcina mazei Go1] Length = 153 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 42/127 (33%), Gaps = 26/127 (20%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR--------------NRELKD 49 F+ A + A VGAV V + +I+S N K Sbjct: 8 DEYFLEIAYVVGKRATCLRNN-VGAVIVRDKRILSTGYNGAPSGMEHCLDVGCIRELEKI 66 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE AI L + +Y T +PC +CA I + I+R+ Y Sbjct: 67 PSGTRHEKCRAVHAEQNAIIQAA--LHGVSIAGATIYCTHQPCILCAKMIINSNIKRVVY 124 Query: 101 GASNPKG 107 P Sbjct: 125 SIPYPDT 131 >gi|289550640|ref|YP_003471544.1| dCMP deaminase ; Late competence protein ComEB [Staphylococcus lugdunensis HKU09-01] gi|315658135|ref|ZP_07911007.1| ComE operon protein comEB [Staphylococcus lugdunensis M23590] gi|289180172|gb|ADC87417.1| dCMP deaminase ; Late competence protein ComEB [Staphylococcus lugdunensis HKU09-01] gi|315496464|gb|EFU84787.1| ComE operon protein comEB [Staphylococcus lugdunensis M23590] Length = 153 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 44/116 (37%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 +K FM+ + A + + + VGA V +N+II+ N + Sbjct: 4 IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ + +YVT PC C +I A I +YY Sbjct: 63 GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGITTIYYA 116 >gi|311746929|ref|ZP_07720714.1| cytidine/deoxycytidylate deaminase family protein [Algoriphagus sp. PR1] gi|126578621|gb|EAZ82785.1| cytidine/deoxycytidylate deaminase family protein [Algoriphagus sp. PR1] Length = 160 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 52/143 (36%), Gaps = 28/143 (19%) Query: 1 MKK---GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------- 42 M+K ++FM A+ A+ + + VGAV +IIS N Sbjct: 1 MEKPDFDDIFMELAVNLAKRSHCIKKH-VGAVLTKETRIISIGYNGPPAGTHNCDDEFPE 59 Query: 43 ---RNRELKDVTA--HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 + HAE AI + + + LYVTL PC CA I I + Sbjct: 60 NGCARDSKGSCSLALHAEQNAILYA--VKNNTSVEGSTLYVTLAPCLACARIIFSMGISK 117 Query: 98 LYY--GASNPKGGGIENGTQFYT 118 + Y + KG G + G F Sbjct: 118 VVYLFSYAEYKGIGTDEGVDFLR 140 >gi|194017722|ref|ZP_03056332.1| ComE operon protein 2 [Bacillus pumilus ATCC 7061] gi|194010622|gb|EDW20194.1| ComE operon protein 2 [Bacillus pumilus ATCC 7061] Length = 189 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 20/117 (17%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV---------- 50 + FM+ + A + + VGA V + +II+ N + DV Sbjct: 4 ISWNQYFMAQSHLLALRSTCER-LAVGATIVRDKRIIAGGYNGSIA-GDVHCADVGCYVI 61 Query: 51 ------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ AI + + + ++YVT PC C AI A IR +YY Sbjct: 62 DHHCVRTIHAEMNAILQCAKFGAPT--ADAEIYVTHFPCLQCCKAIIQAGIRTVYYA 116 >gi|74026040|ref|XP_829586.1| deaminase [Trypanosoma brucei TREU927] gi|70834972|gb|EAN80474.1| deaminase, putative [Trypanosoma brucei] Length = 365 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 36/64 (56%) Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 + + +D++V+ EPC MC+ A+ +R+RR++Y NP GG+ + + + +H Sbjct: 274 DASYLANGMDMFVSHEPCVMCSMALVHSRVRRVFYCFPNPVHGGLGSTVSIHAIQELNHH 333 Query: 126 PEIY 129 ++ Sbjct: 334 FRVF 337 >gi|58336551|ref|YP_193136.1| dCMP deaminase [Lactobacillus acidophilus NCFM] gi|227903102|ref|ZP_04020907.1| competence protein ComEB [Lactobacillus acidophilus ATCC 4796] gi|58253868|gb|AAV42105.1| DCMP deaminase [Lactobacillus acidophilus NCFM] gi|227869088|gb|EEJ76509.1| competence protein ComEB [Lactobacillus acidophilus ATCC 4796] Length = 159 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 18/111 (16%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------DV--- 50 FM AL AQ + + VG+V V +N+II N + + D Sbjct: 9 QYFMMQALVIAQRSTCNRAL-VGSVLVKDNRIIGTGYNGSVSGQPHCDEVGHQMVDGHCV 67 Query: 51 -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H+E+ AI + ++YVT PC C ++ A I+++ Y Sbjct: 68 RTIHSEMNAIIQCAKFGVSTD--GTEIYVTHFPCYNCCKSLLQAGIKKINY 116 >gi|294055974|ref|YP_003549632.1| CMP/dCMP deaminase zinc-binding protein [Coraliomargarita akajimensis DSM 45221] gi|293615307|gb|ADE55462.1| CMP/dCMP deaminase zinc-binding protein [Coraliomargarita akajimensis DSM 45221] Length = 169 Score = 71.1 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 18/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNK----IISRAGN----------RNRELK- 48 FM+ AL A ++ VG V V + II+ N R R+ Sbjct: 37 DAYFMATALLMASRSSCERLH-VGCVIVSGGRQKNRIIAAGYNGFLPGSPHQSRVRDGHE 95 Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE AI R L +Y+T PC CA ++ A + R+ Y Sbjct: 96 QATVHAEQNAIADAARRGVS--LEGATVYITHYPCINCAKILASAGVARIKY 145 >gi|269121089|ref|YP_003309266.1| CMP/dCMP deaminase zinc-binding protein [Sebaldella termitidis ATCC 33386] gi|268614967|gb|ACZ09335.1| CMP/dCMP deaminase zinc-binding protein [Sebaldella termitidis ATCC 33386] Length = 164 Score = 71.1 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 45/122 (36%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN---RNRELKDVTA- 52 + FM AL + + P VGA + +K I+ N ++ Sbjct: 8 ISWNEYFMGLALLSGKRSKD----PTTQVGACIIDEDKKIVGIGYNGFPLGSSDDNMPWG 63 Query: 53 --------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ AI + S + L +YVT PC CA AI ++I R+ Sbjct: 64 KQGDFLETKYPYVVHAELNAI-----LNSIKSLKGCTVYVTHFPCNECAKAIVQSKISRV 118 Query: 99 YY 100 Y Sbjct: 119 IY 120 >gi|330718204|ref|ZP_08312804.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Leuconostoc fallax KCTC 3537] Length = 346 Score = 71.1 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 64/162 (39%), Gaps = 32/162 (19%) Query: 3 KGNVFMSCALEEAQNAALRN-----EIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 M+ A + AA N E P VGAV V +N +++ + + HAE+ Sbjct: 2 NDLTLMALA---GKTAAQANKDLTFENPRVGAVIVKDNVVLATGYHHQFGQE----HAEM 54 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110 + + + +YVTLEPC+ CA +++ +RR+ G+ +P Sbjct: 55 NTFHQ---LKDPAQVIDATMYVTLEPCSTHGKVGSCAQSMAKWGLRRVVIGSIDPNPSTN 111 Query: 111 ENGTQFYTLATCHHSPEIYPGISEQR-SRQIIQDF---FKER 148 +G A I + SR++ +F F+ R Sbjct: 112 GHGVAILKQAG------IQVDVLNTEHSRRLNPEFHYYFEHR 147 >gi|324503290|gb|ADY41431.1| Deoxycytidylate deaminase [Ascaris suum] Length = 284 Score = 71.1 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 41/119 (34%), Gaps = 31/119 (26%) Query: 5 NVFMSCALEEAQNAALRNEIPV---GAVAVLNN-KIISRAGN------------------ 42 FM+ A AQ + PV GAV V + KII N Sbjct: 113 EYFMAVACLAAQRSKD----PVTQVGAVIVNPDLKIIGSGYNGMPNGCSDDVMPWGKDSD 168 Query: 43 RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E K HAE+ AI + E + +Y L PC CA I A I + Y Sbjct: 169 NPLETKYPFVCHAEMNAILN----RNCESVKGSTIYTVLFPCNECAKLIIQAGISEVVY 223 >gi|88801568|ref|ZP_01117096.1| deoxycytidylate deaminase [Polaribacter irgensii 23-P] gi|88782226|gb|EAR13403.1| deoxycytidylate deaminase [Polaribacter irgensii 23-P] Length = 141 Score = 71.1 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 16/121 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-----RELKDVTA--- 52 +K ++ ALE + + + + VGA+ V N IIS N +D + Sbjct: 7 LKYDRAYLKMALEWGKLSHCKRKQ-VGALIVKNRMIISDGFNGTPTGFENCCEDSSGNTK 65 Query: 53 ----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG-ASNPKG 107 HAE AI LY+TL PCT C+ I A I+R+ Y A Sbjct: 66 WEVLHAEANAILKVASSTQSA--EGATLYITLSPCTQCSKLIHQAGIKRVVYANAYKDDA 123 Query: 108 G 108 G Sbjct: 124 G 124 >gi|302875602|ref|YP_003844235.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B] gi|307690132|ref|ZP_07632578.1| CMP/dCMP deaminase zinc-binding protein [Clostridium cellulovorans 743B] gi|302578459|gb|ADL52471.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B] Length = 156 Score = 71.1 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 43/115 (37%), Gaps = 22/115 (19%) Query: 4 GNVFMSCALEEAQNAA-LRNEIPVGAVAV-LNNKIISRAGN----------------RNR 45 FM+ A A+ + R VGAV V N+I++ N Sbjct: 22 NEYFMNLAKLAAERSTCDRAN--VGAVIVNSENRIVATGYNGSVGSKTPHCDDIGHVMRE 79 Query: 46 ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAEI + C + +YVT PC C A+ A I+++YY Sbjct: 80 NHCIATQHAEINCLCY-CAKEGIPV-KNSVIYVTHFPCLNCTKALIQAGIKKIYY 132 >gi|224476697|ref|YP_002634303.1| putative deaminase [Staphylococcus carnosus subsp. carnosus TM300] gi|222421304|emb|CAL28118.1| putative deaminase similar to ComEB [Staphylococcus carnosus subsp. carnosus TM300] Length = 153 Score = 71.1 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRE---------------LKDVTAHAEILAIRMGCRILSQEI 70 VGA V +N+II+ N + T HAE+ A+ + Sbjct: 28 VGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLMEDNHCIRTIHAEMNALLQCTKQGVST- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 +YVT PC C +I A I+R+YY Sbjct: 87 -EGATIYVTHFPCLNCTKSIIQAGIKRIYYA 116 >gi|224541417|ref|ZP_03681956.1| hypothetical protein CATMIT_00579 [Catenibacterium mitsuokai DSM 15897] gi|224525663|gb|EEF94768.1| hypothetical protein CATMIT_00579 [Catenibacterium mitsuokai DSM 15897] Length = 159 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 51/135 (37%), Gaps = 34/135 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + FM A A + P VGA V +N+I+ N Sbjct: 6 ITWDQYFMGVAKLSAYRSKD----PNTQVGACIVNNDNRIVGVGYNGLPRGCEDDKFPWS 61 Query: 43 -RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 R L D HAE+ AI + S + L + +YV+L PC C AI + I+ Sbjct: 62 VREGALYDTKYPYVVHAELNAI-----LNSTQKLQDCRIYVSLFPCHECTKAIIQSGIKE 116 Query: 98 LYYGASNPKGGGIEN 112 + Y + K G E+ Sbjct: 117 IVY--EDEKYKGSES 129 >gi|157693059|ref|YP_001487521.1| dCMP deaminase [Bacillus pumilus SAFR-032] gi|157681817|gb|ABV62961.1| dCMP deaminase [Bacillus pumilus SAFR-032] Length = 189 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 20/117 (17%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV---------- 50 + FM+ + A + + VGA V + +II+ N + DV Sbjct: 4 ISWNQYFMAQSHLLALRSTCER-LAVGATIVRDKRIIAGGYNGSIA-GDVHCADVGCYVI 61 Query: 51 ------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ AI + + + ++YVT PC C AI A IR +YY Sbjct: 62 DHHCVRTIHAEMNAILQCAKFGAPT--ADAEIYVTHFPCLQCCKAIIQAGIRTVYYA 116 >gi|33598380|ref|NP_886023.1| putative riboflavin-specific deaminase [Bordetella parapertussis 12822] gi|33574509|emb|CAE39154.1| putative riboflavin-specific deaminase [Bordetella parapertussis] Length = 386 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 51/151 (33%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M AL A++ P VG V V + +++ + HAE+ A+ Sbjct: 7 TDDVSWMRRALALARSVMYSTAPNPRVGCVIVRDGQVLGEGATQPPGG----PHAEVCAL 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + L +YVTLEPC C A++ A R+ +P G Sbjct: 63 REAAARGAS--LAGATVYVTLEPCSHFGRTPPCVDALAAAAPARVVVAMGDPNPRVNGQG 120 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + + + ++ F Sbjct: 121 LARLRAAG----IAVTEDVCRDEALELNAGF 147 >gi|145628121|ref|ZP_01783922.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.1-21] gi|144979896|gb|EDJ89555.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.1-21] Length = 339 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 19/124 (15%) Query: 32 LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TM 85 N +I+ + + HAE +A+ E YVTLEPC Sbjct: 5 KNGEIVGEGFH--FKAGQP--HAERVALAQAG-----ENAKGATAYVTLEPCSHYGRTPP 55 Query: 86 CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 CA + A + ++ +P G + + A + + ++ +I + F Sbjct: 56 CALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIESAVN----LLNDQAEKINKGFL 111 Query: 146 KERR 149 K R Sbjct: 112 KRMR 115 >gi|126652716|ref|XP_001388375.1| hypothetical protein [Cryptosporidium parvum Iowa II] gi|126117468|gb|EAZ51568.1| hypothetical protein cgd7_1470 [Cryptosporidium parvum Iowa II] Length = 344 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 58/181 (32%), Gaps = 57/181 (31%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 + F+ A + + A P G V L KI++ + H+ + A+ + Sbjct: 160 DKFVKLACKVGEFAQSIGNPPRGCVITLKGKIVAIGEDNRNSDY-PWMHSVMKAVDNFSK 218 Query: 65 ILSQE---------------------------------------------ILPEVDL--- 76 + IL + +L Sbjct: 219 RVCSSSLSMPKMTNLLDSKIQDENQGSQNNEDHKDHLIEIKSKYNISEDQILSDSELKDQ 278 Query: 77 --------YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 Y++ EPC C+ A+ +RI +++Y + + G + + + + ++ +H + Sbjct: 279 YLCTNGIAYLSHEPCISCSMALVHSRISKVFYMHKDKERGFLGSNHKLHCVSELNHHYRV 338 Query: 129 Y 129 + Sbjct: 339 F 339 >gi|321478485|gb|EFX89442.1| hypothetical protein DAPPUDRAFT_190827 [Daphnia pulex] Length = 217 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 39/119 (32%), Gaps = 31/119 (26%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRN---------------- 44 FM+ A A + P VGA NN+I+ N Sbjct: 59 EYFMAVAFLAAMRSKD----PCTQVGACITDSNNRIVGVGYNGMPIGCSDEILPWGKNSS 114 Query: 45 ---RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + L LYV L PC CA I A I+++ Y Sbjct: 115 QPLETKYMYVCHAEMNAIMN----KNTADLRGCTLYVALFPCNECAKLIIQAGIKQVVY 169 >gi|325292542|ref|YP_004278406.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-5-phosphoribosylamino uracil reductase [Agrobacterium sp. H13-3] gi|325060395|gb|ADY64086.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-5-phosphoribosylamino uracil reductase [Agrobacterium sp. H13-3] Length = 413 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 52/147 (35%), Gaps = 21/147 (14%) Query: 3 KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM+ A+E + + E P VG V V + KII+ A HAE A+ Sbjct: 6 DDEKFMARAIEVSLRHQGQTETNPSVGCVLVKDRKIIAEA----VTAIGGRPHAERQALE 61 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ + R+ +P G Sbjct: 62 IAGEAA-----RGATAYVTLEPCSHWGKTPPCANALVEYGVARVVVAVDDPDERVSGRGY 116 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQII 141 A + G+ ++ ++ + Sbjct: 117 SILREAG----IVVETGLLREQGKRAL 139 >gi|228469636|ref|ZP_04054616.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas uenonis 60-3] gi|228308829|gb|EEK17530.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas uenonis 60-3] Length = 162 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 ++ A A+N+ + VGA+ V N IIS N + + +T Sbjct: 20 DRRYLRMARIWAENSYCQR-RQVGALIVHNQMIISDGYNGTPSGFENVCEDDEGITKPYV 78 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI + +Y+T PC CA I +RIRR+ YG Sbjct: 79 LHAEANAITKVAASGNN--CTGATIYITASPCLECAKLIIQSRIRRVVYG 126 >gi|313894545|ref|ZP_07828109.1| cytidine and deoxycytidylate deaminase zinc-binding region [Veillonella sp. oral taxon 158 str. F0412] gi|313440941|gb|EFR59369.1| cytidine and deoxycytidylate deaminase zinc-binding region [Veillonella sp. oral taxon 158 str. F0412] Length = 159 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 29/121 (23%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN---RNRELKDVTA- 52 + FM A+ AQ + P VGA V +NKI+S N N D T Sbjct: 8 ISWDEYFMGVAILAAQRSKD----PNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWE 63 Query: 53 -------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 H+E+ AI L +YVTL PC CA AI + I+ + Sbjct: 64 RDTADDNKYFYTVHSELNAILN----YRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVI 119 Query: 100 Y 100 Y Sbjct: 120 Y 120 >gi|303231464|ref|ZP_07318195.1| cytidine and deoxycytidylate deaminase zinc-binding region [Veillonella atypica ACS-049-V-Sch6] gi|302513901|gb|EFL55912.1| cytidine and deoxycytidylate deaminase zinc-binding region [Veillonella atypica ACS-049-V-Sch6] Length = 159 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 29/121 (23%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN---RNRELKDVTA- 52 + FM A+ AQ + P VGA V +NKI+S N N D T Sbjct: 8 ISWDEYFMGVAILAAQRSKD----PNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWE 63 Query: 53 -------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 H+E+ AI L +YVTL PC CA AI + I+ + Sbjct: 64 RDTADDNKYFYTVHSELNAILN----YRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVI 119 Query: 100 Y 100 Y Sbjct: 120 Y 120 >gi|282850251|ref|ZP_06259630.1| cytidine and deoxycytidylate deaminase zinc-binding region [Veillonella parvula ATCC 17745] gi|282579744|gb|EFB85148.1| cytidine and deoxycytidylate deaminase zinc-binding region [Veillonella parvula ATCC 17745] Length = 159 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 29/121 (23%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN---RNRELKDVTA- 52 + FM A+ AQ + P VGA V +NKI+S N N D T Sbjct: 8 ISWDEYFMGVAILAAQRSKD----PNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWE 63 Query: 53 -------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 H+E+ AI L +YVTL PC CA AI + I+ + Sbjct: 64 RDTADDNKYFYTVHSELNAILN----YRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVI 119 Query: 100 Y 100 Y Sbjct: 120 Y 120 >gi|256786427|ref|ZP_05524858.1| bifunctional enzyme deaminase/reductase [Streptomyces lividans TK24] gi|289770318|ref|ZP_06529696.1| bifunctional enzyme deaminase/reductase [Streptomyces lividans TK24] gi|289700517|gb|EFD67946.1| bifunctional enzyme deaminase/reductase [Streptomyces lividans TK24] Length = 376 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 26/127 (20%) Query: 4 GNVFMSCALEEAQN------AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEI 56 +++ A E A+ A VGAV V + ++R +R E D HAE Sbjct: 231 DRHWLALACELAELCPPSDTAFS-----VGAVVVAADGSELARGHSR--EGGDPVVHAEE 283 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPK--- 106 A+ LP +Y +LEPC CA I A +RR+ P Sbjct: 284 AAL--AKVDPEDPRLPGATVYSSLEPCARRASRPAPCARLILDAGVRRVVTAWREPDTFV 341 Query: 107 GGGIENG 113 G +G Sbjct: 342 AGADGSG 348 >gi|238019264|ref|ZP_04599690.1| hypothetical protein VEIDISOL_01128 [Veillonella dispar ATCC 17748] gi|237863963|gb|EEP65253.1| hypothetical protein VEIDISOL_01128 [Veillonella dispar ATCC 17748] Length = 159 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 29/121 (23%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN---RNRELKDVTA- 52 + FM A+ AQ + P VGA V +NKI+S N N D T Sbjct: 8 ISWDEYFMGVAILAAQRSKD----PNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWE 63 Query: 53 -------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 H+E+ AI L +YVTL PC CA AI + I+ + Sbjct: 64 RDSADDNKYFYTVHSELNAILN----YRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVI 119 Query: 100 Y 100 Y Sbjct: 120 Y 120 >gi|269798024|ref|YP_003311924.1| CMP/dCMP deaminase zinc-binding protein [Veillonella parvula DSM 2008] gi|294791904|ref|ZP_06757052.1| deoxycytidylate deaminase (dCMP deaminase) [Veillonella sp. 6_1_27] gi|269094653|gb|ACZ24644.1| CMP/dCMP deaminase zinc-binding protein [Veillonella parvula DSM 2008] gi|294457134|gb|EFG25496.1| deoxycytidylate deaminase (dCMP deaminase) [Veillonella sp. 6_1_27] Length = 159 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 29/121 (23%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN---RNRELKDVTA- 52 + FM A+ AQ + P VGA V +NKI+S N N D T Sbjct: 8 ISWDEYFMGVAILAAQRSKD----PNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWE 63 Query: 53 -------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 H+E+ AI L +YVTL PC CA AI + I+ + Sbjct: 64 RDTADDNKYFYTVHSELNAILN----YRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVI 119 Query: 100 Y 100 Y Sbjct: 120 Y 120 >gi|21222507|ref|NP_628286.1| bifunctional enzyme deaminase/reductase [Streptomyces coelicolor A3(2)] gi|5918510|emb|CAB56387.1| putative bifunctional enzyme deaminase/reductase [Streptomyces coelicolor A3(2)] Length = 376 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 26/127 (20%) Query: 4 GNVFMSCALEEAQN------AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEI 56 +++ A E A+ A VGAV V + ++R +R E D HAE Sbjct: 231 DRHWLALACELAELCPPSDTAFS-----VGAVVVAADGSELARGHSR--EGGDPVVHAEE 283 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPK--- 106 A+ LP +Y +LEPC CA I A +RR+ P Sbjct: 284 AAL--AKVDPEDPRLPGATVYSSLEPCARRASRPAPCARLILDAGVRRVVTAWREPDTFV 341 Query: 107 GGGIENG 113 G +G Sbjct: 342 AGADGSG 348 >gi|327400004|ref|YP_004340843.1| CMP/dCMP deaminase zinc-binding protein [Archaeoglobus veneficus SNP6] gi|327315512|gb|AEA46128.1| CMP/dCMP deaminase zinc-binding protein [Archaeoglobus veneficus SNP6] Length = 159 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 51/142 (35%), Gaps = 30/142 (21%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 + FM A A + + VGA+ V + +I++ N +EL Sbjct: 10 DHYFMEIARVVASRSTCLRQK-VGALIVKDKRILATGYNGAPSGLPHCLEIGCLRKELNV 68 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE AI + + LY T +PC MCA I A I+++ Y Sbjct: 69 PSGERHELCRAVHAEQNAIIQAA--VHGVSIVGGTLYTTHQPCIMCAKMIINAGIKKVVY 126 Query: 101 GASNPKGGGIENGTQFYTLATC 122 G + G +F A Sbjct: 127 G----RRYADGRGLEFLKEAGI 144 >gi|225685288|gb|EEH23572.1| predicted protein [Paracoccidioides brasiliensis Pb03] Length = 241 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 45/122 (36%), Gaps = 28/122 (22%) Query: 6 VFMSCALEEAQNAALRNEIP-----VGAVAV---LNNKI---ISRAGNRNRELKDVTAHA 54 +M A A P G V V ++ I N N + + T+H Sbjct: 49 YWMRRA----NQALSDLGSPCPFAAFGTVIVNHTKQGELGDLICIGVNENSKTGNPTSHG 104 Query: 55 EILAIRMGCRILSQEI-------------LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 EI AI ++L+ + E+ LY E C+MC +AI A + YG Sbjct: 105 EIAAITNCTKVLTDKSGRFKMTPSQTLNAFQELTLYSNAESCSMCTSAIRWAGFKEYVYG 164 Query: 102 AS 103 +S Sbjct: 165 SS 166 >gi|309810737|ref|ZP_07704545.1| riboflavin biosynthesis protein RibD [Dermacoccus sp. Ellin185] gi|308435368|gb|EFP59192.1| riboflavin biosynthesis protein RibD [Dermacoccus sp. Ellin185] Length = 340 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 47/122 (38%), Gaps = 15/122 (12%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A + A + + P VG V V + I++ +R T H A + I Sbjct: 1 MERAAQLAALSPRVDPNPRVGCVVVDADGVILAEGYHR----GAGTWH--AEAAAINEAI 54 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + L YVTLEPC CA A+ A + R+ +G +P G G Q Sbjct: 55 ATGVDLRGATAYVTLEPCAHTGRTPSCARALIRAGVARVVFGQPDPNGAAAG-GAQILRE 113 Query: 120 AT 121 A Sbjct: 114 AG 115 >gi|283796628|ref|ZP_06345781.1| putative deoxycytidylate deaminase [Clostridium sp. M62/1] gi|291076051|gb|EFE13415.1| putative deoxycytidylate deaminase [Clostridium sp. M62/1] gi|295092489|emb|CBK78596.1| Deoxycytidylate deaminase [Clostridium cf. saccharolyticum K10] gi|295115332|emb|CBL36179.1| Deoxycytidylate deaminase [butyrate-producing bacterium SM4/1] Length = 176 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 40/125 (32%), Positives = 50/125 (40%), Gaps = 33/125 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + FM A + AA+R++ P VGA V +NKI+S N Sbjct: 21 ITWDEYFMGVA----KLAAMRSKDPSTQVGACIVSSDNKILSMGYNGFPIGCSDDEFPWG 76 Query: 43 RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 + E D T H+E+ AI L LYVTL PC CA AI A I Sbjct: 77 KEHETDDPYNAKYLYTTHSELNAILN----YRGGSLEGSKLYVTLFPCNECAKAIIQAGI 132 Query: 96 RRLYY 100 R L Y Sbjct: 133 RTLVY 137 >gi|330504323|ref|YP_004381192.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina NK-01] gi|328918609|gb|AEB59440.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina NK-01] Length = 184 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 2/107 (1%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRN-RELKDVTAHAEILAIRM 61 +++ E+A A VGA+ V +++ N+ AHAE+ + Sbjct: 19 DDIWARLCCEQALLAIEDGCYAVGALLVDEAGELLCSGRNQVFASAYASAAHAEMQVLDQ 78 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 R Q + LYV+LEPC MC I LA I R+ Y A + GG Sbjct: 79 LEREHPQVDRRGLTLYVSLEPCLMCYGRILLAGITRVRYLARDRDGG 125 >gi|328873326|gb|EGG21693.1| CMP/dCMP deaminase [Dictyostelium fasciculatum] Length = 276 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 4/80 (5%) Query: 26 VGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 A+ V N+ I N+ K + H EI AI I + LY T E C Sbjct: 71 FSALIVDAVTNEEICYGYNQ--GGKSMIYHGEIQAIMNCTTITGRNSWSGTYLYTTGESC 128 Query: 84 TMCAAAISLARIRRLYYGAS 103 MC AAI + ++ YG+S Sbjct: 129 PMCQAAIMWSGFDKVIYGSS 148 >gi|257463951|ref|ZP_05628336.1| deoxycytidylate deaminase [Fusobacterium sp. D12] gi|317061475|ref|ZP_07925960.1| deoxycytidylate deaminase [Fusobacterium sp. D12] gi|313687151|gb|EFS23986.1| deoxycytidylate deaminase [Fusobacterium sp. D12] Length = 160 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 44/122 (36%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------R 43 + FM AL A + P VGA V +K II N Sbjct: 7 ITWDEYFMGVALLSAMRSKD----PNTQVGACIVSPDKKIIGLGYNGLPKGCEDDEFPWE 62 Query: 44 NR----ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 E K HAE+ AI + S + L +YV L PC C+ AI + IR + Sbjct: 63 REGEFLETKYPYVCHAELNAI-----LNSTQSLKNCSIYVALFPCHECSKAIIQSGIREI 117 Query: 99 YY 100 Y Sbjct: 118 VY 119 >gi|295107524|emb|CBL05067.1| Deoxycytidylate deaminase [Gordonibacter pamelaeae 7-10-1-b] Length = 153 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 42/122 (34%), Gaps = 30/122 (24%) Query: 4 GNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGN--------------RNREL 47 FM A E A R VGAV V + +I++ N ++L Sbjct: 12 DEYFMKLANEVATRTTCMRRG---VGAVIVKDRRILATGYNGVPTGMRHCAETGCLRQQL 68 Query: 48 KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + HAE AI R + +YV +PC +CA + A I + Sbjct: 69 GVPSGQRHEICRGLHAEQNAIIQAARYGIN--ITGASIYVNTQPCVVCAKMLINAGIEEI 126 Query: 99 YY 100 Y Sbjct: 127 VY 128 >gi|222151486|ref|YP_002560642.1| late competence operon required for DNA binding and uptake ComEB [Macrococcus caseolyticus JCSC5402] gi|222120611|dbj|BAH17946.1| late competence operon required for DNA binding and uptake ComEB [Macrococcus caseolyticus JCSC5402] Length = 153 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL----KDV------ 50 ++ FM+ + A + + VGA V NN+II+ N + D Sbjct: 4 IQWKEYFMAQSQLLALRSTCTR-LSVGATIVKNNRIIAGGYNGSVSGEVHCIDAGCYVEG 62 Query: 51 -----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ ++ D+YVT PC C ++ A I+++YY Sbjct: 63 GHCIRTIHAEMNALLQCAKMGVTT--EGADIYVTHFPCIHCTKSLIQAGIKKIYYA 116 >gi|238882595|gb|EEQ46233.1| DRAP deaminase [Candida albicans WO-1] Length = 589 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 20/151 (13%) Query: 6 VFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+EEA+ + + VG V V N ++IS +R HAE A+ Sbjct: 439 KFMEMAIEEAEKCGETQTQFNVGCVLVHNGQVISTGHSRELPGN---THAEQCALEKYFS 495 Query: 65 ILSQEI--LPEVDLYVTLEPC-------TMCAAAISLAR-IRRLYYGASNPKGGGIENGT 114 E +++ ++EPC C I + I+ + G P ++N + Sbjct: 496 KNGGEREVPAGTEIFTSMEPCSLRLSGNLPCVDRILQTKNIKTCFVGVLEPDI-FVKNNS 554 Query: 115 QFYTLATCHHSPEI--YPGISEQRSRQIIQD 143 + L H E PG E+ +I + Sbjct: 555 SYKKL--LDHGVEYIHIPGY-EETCLEIAKR 582 >gi|68482658|ref|XP_714726.1| hypothetical protein CaO19.10687 [Candida albicans SC5314] gi|68482929|ref|XP_714595.1| hypothetical protein CaO19.3177 [Candida albicans SC5314] gi|46436176|gb|EAK95543.1| hypothetical protein CaO19.3177 [Candida albicans SC5314] gi|46436316|gb|EAK95680.1| hypothetical protein CaO19.10687 [Candida albicans SC5314] Length = 589 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 20/151 (13%) Query: 6 VFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A+EEA+ + + VG V V N ++IS +R HAE A+ Sbjct: 439 KFMEMAIEEAEKCGETQTQFNVGCVLVHNGQVISTGHSRELPGN---THAEQCALEKYFS 495 Query: 65 ILSQEI--LPEVDLYVTLEPC-------TMCAAAISLAR-IRRLYYGASNPKGGGIENGT 114 E +++ ++EPC C I + I+ + G P ++N + Sbjct: 496 KNGGEREVPAGTEIFTSMEPCSLRLSGNLPCVDRILQTKNIKTCFVGVLEPDI-FVKNNS 554 Query: 115 QFYTLATCHHSPEI--YPGISEQRSRQIIQD 143 + L H E PG E+ +I + Sbjct: 555 SYKKL--LDHGVEYIHIPGY-EETCLEIAKR 582 >gi|73668393|ref|YP_304408.1| dCMP deaminase [Methanosarcina barkeri str. Fusaro] gi|72395555|gb|AAZ69828.1| dCMP deaminase [Methanosarcina barkeri str. Fusaro] Length = 159 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 30/123 (24%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN------------------- 42 F+ A + A +N VGAV V + +I+S N Sbjct: 8 DEYFLEIAFVVGKRATCLRKN---VGAVIVKDKRILSTGYNGAPSGMDHCLEIGCIRDLE 64 Query: 43 ----RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 R+ K HAE AI + + +Y T +PC +CA + + I+R+ Sbjct: 65 KIPSGTRQEKCRAVHAEQNAIIQAA--IHGVSIAGATIYCTHQPCILCAKMLINSNIKRV 122 Query: 99 YYG 101 Y Sbjct: 123 VYA 125 >gi|261418466|ref|YP_003252148.1| ComE operon protein 2 [Geobacillus sp. Y412MC61] gi|319767573|ref|YP_004133074.1| ComE operon protein 2 [Geobacillus sp. Y412MC52] gi|261374923|gb|ACX77666.1| ComE operon protein 2 [Geobacillus sp. Y412MC61] gi|317112439|gb|ADU94931.1| ComE operon protein 2 [Geobacillus sp. Y412MC52] Length = 156 Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------D 49 + FM+ + A + + VGA V + +II+ N + D Sbjct: 4 ITWDQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGAHCTDEGCYVID 62 Query: 50 V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ AI + ++YVT PC C AI + IR +YY Sbjct: 63 GHCVRTIHAEMNAILQCAKFGVPT--EGAEMYVTHFPCLHCCKAIIQSGIRAVYYA 116 >gi|331266750|ref|YP_004326380.1| dCMP deaminase, competence protein [Streptococcus oralis Uo5] gi|326683422|emb|CBZ01040.1| dCMP deaminase, competence protein [Streptococcus oralis Uo5] Length = 155 Score = 70.7 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 40/117 (34%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRE------LKDV-- 50 F + AL A + A VGAV V +NK+IS N + D Sbjct: 9 DEYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHDCLV 62 Query: 51 -------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI G YVT PC C + +R+ Y Sbjct: 63 IEGHCVRTLHAEVNAILQGAERGVP---RGFTAYVTHFPCLNCTKQLLQVGCKRVVY 116 >gi|297203757|ref|ZP_06921154.1| CMP/dCMP deaminase zinc-binding protein [Streptomyces sviceus ATCC 29083] gi|197711806|gb|EDY55840.1| CMP/dCMP deaminase zinc-binding protein [Streptomyces sviceus ATCC 29083] Length = 203 Score = 70.7 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 44/153 (28%), Gaps = 19/153 (12%) Query: 8 MSCALEEAQNAALRN-EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A P A+ + +I+S N +AHAE++A+ + Sbjct: 34 MRLVHRLADRNWREGNGGPFAALVAERESGRIVSVGVNVVLSTGVSSAHAEVVALGLAQI 93 Query: 65 ILSQEILPE-----VDLYVTLEPCTMCAAAISLARIRRLYYGASNP--------KGGGIE 111 L +L V PC C A + +R L P G + Sbjct: 94 ATGSWDLGGDGLPSHELVVNWRPCVQCYGATMWSGVRGLVVAGQGPELEEITTFDEGPVG 153 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 E+ + + + +D+ Sbjct: 154 ADW---AEQFETRGIEVVRDVLRDEALAVFRDY 183 >gi|57168828|ref|ZP_00367959.1| riboflavin biosynthesis protein (ribG) [Campylobacter coli RM2228] gi|305432431|ref|ZP_07401593.1| riboflavin biosynthesis protein RibD [Campylobacter coli JV20] gi|57019875|gb|EAL56558.1| riboflavin biosynthesis protein (ribG) [Campylobacter coli RM2228] gi|304444470|gb|EFM37121.1| riboflavin biosynthesis protein RibD [Campylobacter coli JV20] Length = 326 Score = 70.7 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 42/177 (23%), Positives = 65/177 (36%), Gaps = 44/177 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55 MK N +M+ AL EA P VG V + N KI++ +A K AHAE Sbjct: 1 MK--NFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNEKILAIKAH-----EKAGCAHAE 52 Query: 56 ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89 + AI L+ EI + +VTLEPC CA Sbjct: 53 LNAIAHAFTNLNPEISLPQEANAMHEFICKNHRGIFKDSIAFVTLEPCSHQGKTPPCAKL 112 Query: 90 ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 S ++++ + G +F EI G+ + +++++ F K Sbjct: 113 FSELGFKKIFISVKDENEIA-SKGAEFLKKQG----VEIEFGVLKDEGKKLLKPFLK 164 >gi|313902173|ref|ZP_07835582.1| CMP/dCMP deaminase zinc-binding [Thermaerobacter subterraneus DSM 13965] gi|313467573|gb|EFR63078.1| CMP/dCMP deaminase zinc-binding [Thermaerobacter subterraneus DSM 13965] Length = 186 Score = 70.7 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 45/128 (35%), Gaps = 24/128 (18%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGN--------RNRE---LKD 49 FM A A+ + P VGAV V + +I++ N ++D Sbjct: 45 DAYFMELAEVVARRSTC----PRRHVGAVLVRDRRILATGYNGAPPGFPHCTEAGCLMQD 100 Query: 50 V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 T HAE AI L + LY T PC CA + A + R+ Y P Sbjct: 101 GHCVRTIHAEANAILQAA--LHGVTVKGSTLYTTATPCLHCAKLLIGAGVVRVVYRDWYP 158 Query: 106 KGGGIENG 113 +E Sbjct: 159 DPRAVEFL 166 >gi|205374270|ref|ZP_03227069.1| hypothetical protein Bcoam_14139 [Bacillus coahuilensis m4-4] Length = 186 Score = 70.7 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49 + FM+ + A + + VGA V ++I+ N + D Sbjct: 4 ISWDQYFMAQSHLLALRSTCTR-LAVGATIVREKRVIAGGYNGSIAGGDHCIDNGCYVIE 62 Query: 50 ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ AI + +LYVT PC C I A I+++Y+ Sbjct: 63 NHCVRTIHAEVNAILQCAKFGVPT--EGAELYVTHFPCLQCCKTIIQAGIKKVYFA 116 >gi|315023983|gb|EFT36985.1| dCMP deaminase [Riemerella anatipestifer RA-YM] Length = 143 Score = 70.7 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 19/116 (16%) Query: 1 MKKGNVF----MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELK 48 M+ N F + A E A+ + + + VGA+ V + IIS N + + Sbjct: 1 MESHNKFDIAYLKMAQEWAKLSYCKRKQ-VGALIVKDRTIISDGYNGTPSGLENCCEDEQ 59 Query: 49 DVT----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE AI R LY+TL PC C+ I + I+RL Y Sbjct: 60 GQTKWYVLHAEANAILKLARTTQTA--EGATLYLTLSPCKECSKLIYQSGIKRLVY 113 >gi|313206907|ref|YP_004046084.1| cmp/dcmp deaminase zinc-binding protein [Riemerella anatipestifer DSM 15868] gi|312446223|gb|ADQ82578.1| CMP/dCMP deaminase zinc-binding protein [Riemerella anatipestifer DSM 15868] gi|325335656|gb|ADZ11930.1| Deoxycytidylate deaminase [Riemerella anatipestifer RA-GD] Length = 143 Score = 70.7 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 19/116 (16%) Query: 1 MKKGNVF----MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELK 48 M+ N F + A E A+ + + + VGA+ V + IIS N + + Sbjct: 1 MESHNKFDIAYLKMAQEWAKLSYCKRKQ-VGALIVKDRTIISDGYNGTPSGLENCCEDEQ 59 Query: 49 DVT----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE AI R LY+TL PC C+ I + I+RL Y Sbjct: 60 GQTKWYVLHAEANAILKLARTTQTA--EGATLYLTLSPCKECSKLIYQSGIKRLVY 113 >gi|86140853|ref|ZP_01059412.1| putative deoxycytidylate deaminase [Leeuwenhoekiella blandensis MED217] gi|85832795|gb|EAQ51244.1| putative deoxycytidylate deaminase [Leeuwenhoekiella blandensis MED217] Length = 146 Score = 70.7 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 47/134 (35%), Gaps = 33/134 (24%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA----------- 52 ++ A E A+ + + + VGA+ V + IIS N T Sbjct: 13 DIAYLRMAREWAKLSYCQRKQ-VGALIVKDKMIISDGYNGT-----PTGFENICEDEEGY 66 Query: 53 ------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASN 104 HAE AI LY+TL PCT C+ I A I+R+ + + Sbjct: 67 TKWYVLHAEANAILKVAASTQS--CVGATLYITLSPCTECSKLIHQAGIKRVVFNKAYKD 124 Query: 105 PKGGGIENGTQFYT 118 P +G F Sbjct: 125 P------SGIDFLR 132 >gi|160893547|ref|ZP_02074331.1| hypothetical protein CLOL250_01101 [Clostridium sp. L2-50] gi|156864532|gb|EDO57963.1| hypothetical protein CLOL250_01101 [Clostridium sp. L2-50] Length = 174 Score = 70.7 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 45/122 (36%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNN-KIISRAGNRN-----------R 45 + FM AL A+ + P VGA V +N +I+S N Sbjct: 22 ISWDQYFMGIALLSAERSKD----PSTQVGACIVDDNNRILSEGYNGMPAGCEDDIMPWG 77 Query: 46 ELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 ++ D HAE+ AI L + LY TL PC CA AI I+ + Sbjct: 78 KIGDPLNNKYFFVCHAELNAILN----YRGGSLKDARLYSTLFPCNECAKAIIQCGIKEV 133 Query: 99 YY 100 Y Sbjct: 134 IY 135 >gi|262384379|ref|ZP_06077514.1| deoxycytidylate deaminase [Bacteroides sp. 2_1_33B] gi|262294082|gb|EEY82015.1| deoxycytidylate deaminase [Bacteroides sp. 2_1_33B] Length = 144 Score = 70.7 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 15/109 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 ++ A A+N+ + VGA+ V + IIS N + +VT Sbjct: 12 DKRYLRMAAIWAENSYCKR-RQVGALLVKDKMIISDGYNGTPAGFENVCEDENNVTKPYV 70 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI + +YVT PC CA I + I+R+ Y Sbjct: 71 LHAEANAITKVAASSNSS--KGATIYVTSSPCIECAKLIIQSGIKRVVY 117 >gi|301111742|ref|XP_002904950.1| deoxycytidylate deaminase [Phytophthora infestans T30-4] gi|262095280|gb|EEY53332.1| deoxycytidylate deaminase [Phytophthora infestans T30-4] Length = 252 Score = 70.7 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 45/147 (30%), Gaps = 38/147 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNN-KIISRAGN-------------- 42 + + FMS A A + P VGA V KI+ N Sbjct: 93 LSWDDYFMSVAFLSAMRSKD----PSTQVGACIVNPERKIVGIGYNGFPNGCGDDELPWA 148 Query: 43 RNRELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 R HAE+ AI + + +YV L PC CA I + I Sbjct: 149 RETATNSPLDTKYPYVCHAEMNAILN----KNSTDVKGCSIYVALFPCNECAKLIIQSGI 204 Query: 96 RRLYYGASNPKGGGIENGTQFYTLATC 122 R+ Y + K + +F Sbjct: 205 ARVVYFSDKYK-----SDWKFVASRRL 226 >gi|21229207|ref|NP_635129.1| putative cytosine deaminase [Methanosarcina mazei Go1] gi|20907777|gb|AAM32801.1| putative cytosine deaminase [Methanosarcina mazei Go1] Length = 206 Score = 70.7 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 9/105 (8%) Query: 14 EAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVT----AHAEILAIRMGCRILSQ 68 A + VG++ V + + ++ N + + HAE++ + Q Sbjct: 55 LALKSVDSGNYGVGSIIVDRDGETVAFGHNL---MYSPSFRSDLHAEMVTLNYFEEKNPQ 111 Query: 69 -EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 L + LY +LE C MC + A I R+++ + + GG ++ Sbjct: 112 ITTLKDYTLYTSLESCPMCIIRLISAGINRVFHVSPDSIGGMADS 156 >gi|150006872|ref|YP_001301615.1| deoxycytidylate deaminase [Parabacteroides distasonis ATCC 8503] gi|255016096|ref|ZP_05288222.1| deoxycytidylate deaminase [Bacteroides sp. 2_1_7] gi|256842138|ref|ZP_05547643.1| deoxycytidylate deaminase [Parabacteroides sp. D13] gi|298377298|ref|ZP_06987251.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 3_1_19] gi|301308695|ref|ZP_07214647.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 20_3] gi|149935296|gb|ABR41993.1| deoxycytidylate deaminase [Parabacteroides distasonis ATCC 8503] gi|256736454|gb|EEU49783.1| deoxycytidylate deaminase [Parabacteroides sp. D13] gi|298265712|gb|EFI07372.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 3_1_19] gi|300833219|gb|EFK63837.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp. 20_3] Length = 144 Score = 70.7 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 15/109 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 ++ A A+N+ + VGA+ V + IIS N + +VT Sbjct: 12 DKRYLRMAAIWAENSYCKR-RQVGALLVKDKMIISDGYNGTPAGFENVCEDENNVTKPYV 70 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI + +YVT PC CA I + I+R+ Y Sbjct: 71 LHAEANAITKVAASSNSS--KGATIYVTSSPCIECAKLIIQSGIKRVVY 117 >gi|197106417|ref|YP_002131794.1| riboflavin biosynthesis protein RibD [Phenylobacterium zucineum HLK1] gi|196479837|gb|ACG79365.1| riboflavin biosynthesis protein RibD [Phenylobacterium zucineum HLK1] Length = 143 Score = 70.7 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 47/141 (33%), Gaps = 24/141 (17%) Query: 8 MSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTA-HAEILAIRMGCR 64 M A+ A+ E P VG V + + +++ A D HAE LA+ Sbjct: 1 MRRAIALARPQVGRTGENPAVGCVILKDGRVLGEA-----ATGDGGRPHAEELALAQAGE 55 Query: 65 ILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 +VTLEPC C+ ++ A + R+ ++P G Sbjct: 56 AA-----RGATAFVTLEPCAERSSGAASCSERLAAAGMSRVVVACADPSVFAAGGGAARL 110 Query: 118 TLATCHHSPEIYPGISEQRSR 138 A G+ E + Sbjct: 111 RAAG----IVFDQGLLEAEAA 127 >gi|68073195|ref|XP_678512.1| Cytidine and deoxycytidylate deaminase zinc-binding region [Plasmodium berghei strain ANKA] gi|56499004|emb|CAI00047.1| Cytidine and deoxycytidylate deaminase zinc-binding region, putative [Plasmodium berghei] Length = 317 Score = 70.7 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 54/157 (34%), Gaps = 50/157 (31%) Query: 27 GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GCRILSQEI--------------- 70 G V N+KII+ +G + H+ +LAI ++ + Sbjct: 162 GCVLTFNDKIIACSG--DNIKNHPLHHSVMLAIEDVAFKLRNIWRFKKNKKMKNYRTKTK 219 Query: 71 ---------------LPEVD-----------------LYVTLEPCTMCAAAISLARIRRL 98 L Y+T EPC MCA A+ +R++ + Sbjct: 220 EENNSTDDKKMDENVLENCINSNIVISSDQYLCTNYYAYLTHEPCFMCAMAMVHSRVKCV 279 Query: 99 YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 + N + G + + + + L +H ++Y + E+ Sbjct: 280 IFDKVNKQNGALFSREKLHCLKNLNHHFKVYKTVREK 316 >gi|226325555|ref|ZP_03801073.1| hypothetical protein COPCOM_03360 [Coprococcus comes ATCC 27758] gi|225206038|gb|EEG88392.1| hypothetical protein COPCOM_03360 [Coprococcus comes ATCC 27758] Length = 162 Score = 70.7 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 47/123 (38%), Gaps = 31/123 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNR------------N 44 + FM A+ + + P VG V +NKI+S N Sbjct: 9 ISWDEYFMGVAILSGRRSKD----PNTQVGCCIVSADNKILSMGYNGLPRGCSDDEFPWE 64 Query: 45 RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 RE +D T H+E+ AI S L LYV+L PC CA AI + I+ Sbjct: 65 REGEDPLKTKYVYTVHSELNAILN----YSGGSLEGAKLYVSLFPCNECAKAIIQSGIKE 120 Query: 98 LYY 100 + Y Sbjct: 121 VIY 123 >gi|42561111|ref|NP_975562.1| dCMP deaminase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492608|emb|CAE77204.1| dCMP deaminase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|256384072|gb|ACU78642.1| deoxycytidylate deaminase [Mycoplasma mycoides subsp. capri str. GM12] gi|256384904|gb|ACU79473.1| deoxycytidylate deaminase [Mycoplasma mycoides subsp. capri str. GM12] gi|296455570|gb|ADH21805.1| deoxycytidylate deaminase (dCMP deaminase) [synthetic Mycoplasma mycoides JCVI-syn1.0] gi|301320471|gb|ADK69114.1| cytidine and deoxycytidylate deaminase zinc-binding region [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 160 Score = 70.7 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 39/124 (31%), Positives = 53/124 (42%), Gaps = 33/124 (26%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGNR-NRELKD---V------ 50 + FM A A + P VGA+ V +I++ N R + D Sbjct: 12 HYFMLIAKASAMRSKD----PNTQVGAIVVNELQQIVATGYNGFPRGVSDDEFPWSKNNE 67 Query: 51 ---------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 AHAE+ AI + S+ L DLYVTL PC CA I A I+R+YY Sbjct: 68 DWLENKYAYVAHAELNAI-----VSSRSDLSNCDLYVTLFPCNECAKIIIQAGIKRIYY- 121 Query: 102 ASNP 105 A++P Sbjct: 122 ANDP 125 >gi|15613897|ref|NP_242200.1| late competence operon required for DNA binding and uptake [Bacillus halodurans C-125] gi|10173950|dbj|BAB05053.1| late competence operon required for DNA binding and uptake [Bacillus halodurans C-125] Length = 188 Score = 70.7 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 18/118 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR---------------NR 45 + FM+ + A + + VGA V + +II+ N Sbjct: 4 ISWDQYFMAQSHLLALRSTCTR-LMVGATIVRDKRIIAGGYNGSISGGPHCIDEGCYVVE 62 Query: 46 ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 T HAE+ A+ + ++YVT PC C AI + I+++YY Sbjct: 63 GHCIRTIHAEVNALLQCAKFGVPT--EGAEIYVTHFPCVNCTKAIIQSGIKKVYYATD 118 >gi|332970483|gb|EGK09473.1| cytidine/deoxycytidylate deaminase [Psychrobacter sp. 1501(2011)] Length = 164 Score = 70.7 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%) Query: 22 NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 + P G+V V ++I NR ++ T H E+ + ++Q E +Y + Sbjct: 24 GDSPFGSVLVSGSGEVIREDRNRVNSVE-PTYHPELALAQWAAENMTQAQRSEAVVYTSG 82 Query: 81 EPCTMCAAAISLARIRRLYY 100 E C MC+AA + A + R+ Y Sbjct: 83 EHCAMCSAAHAWAGLGRIVY 102 >gi|266619532|ref|ZP_06112467.1| putative deoxycytidylate deaminase [Clostridium hathewayi DSM 13479] gi|288868943|gb|EFD01242.1| putative deoxycytidylate deaminase [Clostridium hathewayi DSM 13479] Length = 166 Score = 70.7 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 48/128 (37%), Gaps = 33/128 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + FM A+ + + P VGA V +NKI+S N Sbjct: 11 ITWDEYFMGVAMLSGKRSKD----PSTQVGACIVSQDNKILSMGYNGFPKGCSDDEFPWG 66 Query: 43 RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 + E D + H+E+ AI L LYVTL PC CA AI + I Sbjct: 67 KEHEKDDPYNAKYFYSTHSELNAILN----YRGGSLEGSKLYVTLFPCNECAKAIIQSGI 122 Query: 96 RRLYYGAS 103 + + YG+ Sbjct: 123 KTIVYGSD 130 >gi|39996786|ref|NP_952737.1| cytidine/deoxycytidylate deaminase family protein [Geobacter sulfurreducens PCA] gi|39983674|gb|AAR35064.1| cytidine/deoxycytidylate deaminase family protein [Geobacter sulfurreducens PCA] gi|298505797|gb|ADI84520.1| deoxycytidylate deaminase [Geobacter sulfurreducens KN400] Length = 154 Score = 70.7 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 43/127 (33%), Gaps = 28/127 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 FM A+ + VGAV V + I++ N L Sbjct: 7 DEYFMEITHLVAKRSTCLR-RQVGAVIVKDKNILATGYNGAPSGVAHCLDVGCLRERLGI 65 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE AI + + + LY T PC +C+ + A IRR+ Y Sbjct: 66 PSGERHELCRGLHAEQNAIIQAAKHGTN--IDGGTLYCTTMPCIICSKMLINAGIRRIVY 123 Query: 101 --GASNP 105 G S+ Sbjct: 124 EEGYSDD 130 >gi|15675651|ref|NP_269825.1| putative DNA-binding late competence protein [Streptococcus pyogenes M1 GAS] gi|19746757|ref|NP_607893.1| late competence protein [Streptococcus pyogenes MGAS8232] gi|21911111|ref|NP_665379.1| putative late competence protein required for DNA binding [Streptococcus pyogenes MGAS315] gi|28895204|ref|NP_801554.1| late competence protein required for DNA binding [Streptococcus pyogenes SSI-1] gi|71911361|ref|YP_282911.1| comE operon protein 2 [Streptococcus pyogenes MGAS5005] gi|139473178|ref|YP_001127893.1| cytidine and deoxycytidylate deaminase [Streptococcus pyogenes str. Manfredo] gi|209559918|ref|YP_002286390.1| Putative late competence protein required for DNA binding [Streptococcus pyogenes NZ131] gi|13622863|gb|AAK34546.1| putative late competence protein required for DNA binding [Streptococcus pyogenes M1 GAS] gi|19748988|gb|AAL98392.1| putative late competence protein [Streptococcus pyogenes MGAS8232] gi|21905321|gb|AAM80182.1| putative late competence protein required for DNA binding [Streptococcus pyogenes MGAS315] gi|28810450|dbj|BAC63387.1| putative late competence protein required for DNA binding [Streptococcus pyogenes SSI-1] gi|71854143|gb|AAZ52166.1| comE operon protein 2 [Streptococcus pyogenes MGAS5005] gi|134271424|emb|CAM29644.1| putative cytidine and deoxycytidylate deaminase [Streptococcus pyogenes str. Manfredo] gi|209541119|gb|ACI61695.1| Putative late competence protein required for DNA binding [Streptococcus pyogenes NZ131] Length = 153 Score = 70.7 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V +N+II+ N D T HAE+ A+ + Sbjct: 29 VGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEDGHCIRTVHAEMNALIQCAKEGISTD 88 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++YVT PC C A+ A I ++ Y Sbjct: 89 --GTEIYVTHFPCINCTKALLQAGITKITY 116 >gi|323465756|gb|ADX69443.1| DCMP deaminase [Lactobacillus helveticus H10] Length = 159 Score = 70.7 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 18/111 (16%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------DV--- 50 FM AL AQ + + VG+V V +N+II N + + D Sbjct: 9 QYFMMQALVIAQRSTCNRAL-VGSVLVKDNRIIGTGYNGSVSGQPHCDEVGHQMVDGHCV 67 Query: 51 -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H+E+ AI + + ++YVT PC C ++ A ++++ Y Sbjct: 68 RTIHSEMNAIIQCAKFGVSTD--DTEIYVTHFPCYNCCKSLLQAGVKKINY 116 >gi|238926636|ref|ZP_04658396.1| dCMP deaminase [Selenomonas flueggei ATCC 43531] gi|238885582|gb|EEQ49220.1| dCMP deaminase [Selenomonas flueggei ATCC 43531] Length = 158 Score = 70.7 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 40/122 (32%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKD------- 49 + FM AL A + P VGA V +K I+ N D Sbjct: 3 ISWDEYFMGVALFSAYRSKD----PHTQVGACIVNEDKHIVGVGYNGMPNGCDDHEYPWG 58 Query: 50 VTA-----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 T HAE+ AI L +Y +L PC C AI + IR + Sbjct: 59 RTGEFAEQKYPYVVHAELNAILNA-----STSLKGCRIYTSLFPCNECCKAIIQSGIREV 113 Query: 99 YY 100 Y Sbjct: 114 IY 115 >gi|237736005|ref|ZP_04566486.1| deoxycytidylate deaminase [Fusobacterium mortiferum ATCC 9817] gi|229421886|gb|EEO36933.1| deoxycytidylate deaminase [Fusobacterium mortiferum ATCC 9817] Length = 163 Score = 70.7 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 44/122 (36%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------R 43 ++ FM AL + + P VGA V K I+ N Sbjct: 7 IEWDEYFMGVALLSGKRSKD----PNTQVGACIVNEEKKIVGVGYNGLPIGCSDDEYPWE 62 Query: 44 NR----ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 E K HAE+ AI + S + L +YV L PC C+ AI + IR L Sbjct: 63 REGEFLETKYPFVCHAELNAI-----LNSTKSLKNCTIYVALFPCHECSKAIIQSGIREL 117 Query: 99 YY 100 Y Sbjct: 118 VY 119 >gi|171691995|ref|XP_001910922.1| hypothetical protein [Podospora anserina S mat+] gi|170945946|emb|CAP72747.1| unnamed protein product [Podospora anserina S mat+] Length = 353 Score = 70.3 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 38/122 (31%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVTA- 52 FM+ A AQ A R VG V V + ++IS N D Sbjct: 197 DAYFMALAELAAQRANCMKRR---VGCVIVRDKRVISTGYNGTPRGLVNCGEGGCDRCNA 253 Query: 53 --------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE A+ R +E LY T PC C+ I I + Sbjct: 254 GQGSGHGLTTCLCIHAEENALLEAGRERVRE---GAVLYCTTHPCLTCSIKIVQVGIGEV 310 Query: 99 YY 100 Y Sbjct: 311 VY 312 >gi|323490043|ref|ZP_08095264.1| ComE operon protein 2 [Planococcus donghaensis MPA1U2] gi|323396339|gb|EGA89164.1| ComE operon protein 2 [Planococcus donghaensis MPA1U2] Length = 190 Score = 70.3 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 22/125 (17%) Query: 1 MKK---GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-------- 49 MK+ FM+ + A + + VGA V + +I++ N + D Sbjct: 1 MKRITWDQFFMAQSHLLALRSTCTR-LAVGATIVRDRRIMAGGYNGSISGGDHCIDKGCY 59 Query: 50 -------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 T HAE+ A+ + + D+YV+ PC C +I A I RLYY A Sbjct: 60 VVDGHCVRTIHAEMNALLQCSKYGVS--VNGADMYVSHFPCLQCTKSIIQAGIARLYY-A 116 Query: 103 SNPKG 107 S+ K Sbjct: 117 SDYKN 121 >gi|255727408|ref|XP_002548630.1| cytosine deaminase [Candida tropicalis MYA-3404] gi|240134554|gb|EER34109.1| cytosine deaminase [Candida tropicalis MYA-3404] Length = 93 Score = 70.3 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 10/93 (10%) Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + A+ R+ + + +Y TL PC MC AI L I+R+ G N G E+ + Sbjct: 1 MSALEDAGRLPGKAY-KDCTIYTTLSPCNMCTGAILLYGIKRVVMG-ENVNFQGAEDLLR 58 Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 + + + + ++I+ F KER Sbjct: 59 ANGVEVIN--------LDDNDCKEIMSKFIKER 83 >gi|170037331|ref|XP_001846512.1| deoxycytidylate deaminase [Culex quinquefasciatus] gi|167880421|gb|EDS43804.1| deoxycytidylate deaminase [Culex quinquefasciatus] Length = 193 Score = 70.3 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 42/120 (35%), Gaps = 31/120 (25%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNN-KIISRAGNR------------NREL 47 FM+ A A+ + P VGA V + KI+ N + Sbjct: 26 NEYFMATAFLAAKRSKD----PNTQVGACIVNDERKIVGVGYNGFPIGCGDDDFPWGKNS 81 Query: 48 KDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D HAE+ AI + + +YV L PC CA I +RIR + Y Sbjct: 82 NDPLDTKYLYVCHAEMNAILN----KNSSDVKNCTMYVALFPCNECAKIIIQSRIREVIY 137 >gi|148232294|ref|NP_001084625.1| dCMP deaminase [Xenopus laevis] gi|46249834|gb|AAH68731.1| MGC81193 protein [Xenopus laevis] Length = 190 Score = 70.3 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 50/156 (32%), Gaps = 39/156 (25%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-RNRELKD------VTA- 52 FM+ A AQ + P VGA V NKI+ N D TA Sbjct: 28 EYFMAVAFLAAQRSKD----PSSQVGACIVNSENKIVGIGYNGMPNGCHDDVLPWARTAE 83 Query: 53 -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY- 100 HAE+ AI + + +YV L PC CA + A I+ + + Sbjct: 84 DRLDTKYPYVCHAELNAIMN----KNTADVKGCTMYVALFPCNECAKLVIQAGIKEVVFM 139 Query: 101 ---GASNPKGGGIENGTQFYTLATCH----HSPEIY 129 NP+ + + + H + Sbjct: 140 SDKYHDNPEMTAARHMFDLAGIKYTNFIPKHRKIVI 175 >gi|90419410|ref|ZP_01227320.1| riboflavin biosynthesis protein [Aurantimonas manganoxydans SI85-9A1] gi|90336347|gb|EAS50088.1| riboflavin biosynthesis protein [Aurantimonas manganoxydans SI85-9A1] Length = 383 Score = 70.3 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 46/148 (31%), Gaps = 25/148 (16%) Query: 4 GNVFMSCALEEAQN--AALRNEIPVGAVAVLNN----KIISRAGNRNRELKDVTAHAEIL 57 FM+ A+ AQ V + V ++ +I+ R HAE Sbjct: 19 DRRFMAAAIRYAQRHVGRTATNPSVATLIVRDDGTGPRIVGRG----VTAIGGRPHAETG 74 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+ + YVTLEPC CA A+ A I R+ A++P Sbjct: 75 ALAEAGELA-----RGATAYVTLEPCAHHGRTPPCAEALVTAGIARVVSAAADPDPRVDG 129 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQ 139 G + P + + Sbjct: 130 RGHAILRAGGL----SVTPRVMAAEAAA 153 >gi|296170729|ref|ZP_06852302.1| riboflavin biosynthesis protein RibD [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894612|gb|EFG74348.1| riboflavin biosynthesis protein RibD [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 340 Score = 70.3 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 55/151 (36%), Gaps = 22/151 (14%) Query: 8 MSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M A+E+++ PVGAV + ++ G D HAE+LA+R + Sbjct: 12 MRLAIEQSKQVKGTTYPNPPVGAVVLDAGGVVVGVGGTEPAGGD---HAEVLALRRAGDL 68 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 VTLEPC C A+ A++ + Y ++P Sbjct: 69 A-----AGGTAVVTLEPCNHHGRTPPCVNALLEAKVATVVYAVADPNP-----AAAGGAA 118 Query: 120 ATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149 ++ G+ + ++++ ++R Sbjct: 119 RLAEAGVQVTGGVLADEVAGGPLREWLHKQR 149 >gi|282875983|ref|ZP_06284850.1| ComE operon protein 2 [Staphylococcus epidermidis SK135] gi|281295008|gb|EFA87535.1| ComE operon protein 2 [Staphylococcus epidermidis SK135] Length = 153 Score = 70.3 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 +K FM+ + A + + + VGA V +N+II+ N + Sbjct: 4 IKWEEYFMAQSHLLALRSTCKR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ + + +YVT PC C +I A I+ +YY Sbjct: 63 GHCIRTIHAEMNTLLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKTIYYA 116 >gi|260185721|ref|ZP_05763195.1| deaminase [Mycobacterium tuberculosis CPHL_A] gi|289446393|ref|ZP_06436137.1| deaminase [Mycobacterium tuberculosis CPHL_A] gi|289419351|gb|EFD16552.1| deaminase [Mycobacterium tuberculosis CPHL_A] Length = 140 Score = 70.3 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 26/55 (47%) Query: 46 ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + D TAHAE LAIR C L E L L V PC MC ++ + + + Sbjct: 13 QTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSLYYCSLDEVVF 67 >gi|318081273|ref|ZP_07988605.1| putative riboflavin/cytosine deaminase [Streptomyces sp. SA3_actF] Length = 254 Score = 70.3 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 25/141 (17%) Query: 9 SCALEEAQNAALR---NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 A+ A R N + VG V + + ++ ++ HAEI A+R Sbjct: 11 REAIALAARGLGRTRPNPV-VGCVVLDASGEVAGSGWHQRAGG----PHAEIHALRAAG- 64 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 E VTLEPC C+ A+ A +RR+ + ++P Sbjct: 65 ----ERARGGTALVTLEPCDHTGRTGPCSRALIEAGVRRVVHAVADPTDQATGGADTLRA 120 Query: 119 LATCHHSPEIYPGISEQRSRQ 139 ++ G+ E+ + Sbjct: 121 A-----GVDVEHGLLEREAAD 136 >gi|294643957|ref|ZP_06721744.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides ovatus SD CC 2a] gi|294807647|ref|ZP_06766440.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides xylanisolvens SD CC 1b] gi|292640729|gb|EFF58960.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides ovatus SD CC 2a] gi|294445083|gb|EFG13757.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bacteroides xylanisolvens SD CC 1b] Length = 293 Score = 70.3 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 45/126 (35%), Gaps = 21/126 (16%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+EE P VGAV + I+++A K HAE +AI L Sbjct: 37 MKIAIEEQSKCTS---FPKVGAVIAKDGIILAKAFKDEESSK----HAERIAIE----KL 85 Query: 67 SQEILPEVDLYVTLEPCT---------MCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + L L TLEPC C I + I+ + G +P G G + Sbjct: 86 DKSTLNGATLVTTLEPCINIANNQPLQSCTDLIIESGIKDVIIGILDPNGAIYCQGYEKL 145 Query: 118 TLATCH 123 + Sbjct: 146 LENNIN 151 >gi|237716221|ref|ZP_04546702.1| CMP/dCMP deaminase [Bacteroides sp. D1] gi|262407829|ref|ZP_06084377.1| CMP/dCMP deaminase [Bacteroides sp. 2_1_22] gi|229443868|gb|EEO49659.1| CMP/dCMP deaminase [Bacteroides sp. D1] gi|262354637|gb|EEZ03729.1| CMP/dCMP deaminase [Bacteroides sp. 2_1_22] Length = 276 Score = 70.3 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 45/126 (35%), Gaps = 21/126 (16%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+EE P VGAV + I+++A K HAE +AI L Sbjct: 20 MKIAIEEQSKCTS---FPKVGAVIAKDGIILAKAFKDEESSK----HAERIAIE----KL 68 Query: 67 SQEILPEVDLYVTLEPCT---------MCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 + L L TLEPC C I + I+ + G +P G G + Sbjct: 69 DKSTLNGATLVTTLEPCINIANNQPLQSCTDLIIESGIKDVIIGILDPNGAIYCQGYEKL 128 Query: 118 TLATCH 123 + Sbjct: 129 LENNIN 134 >gi|25028272|ref|NP_738326.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Corynebacterium efficiens YS-314] gi|23493556|dbj|BAC18526.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Corynebacterium efficiens YS-314] Length = 328 Score = 70.3 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 42/121 (34%), Gaps = 22/121 (18%) Query: 9 SCALEEAQNAALR--N----EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61 AL+ A A+ PVGAV + + ++ + AHAE++A+ Sbjct: 4 EEALQLAIEASEEVVGTTSPNPPVGAVILDADGELAGIGATQPPGG----AHAEVMALAA 59 Query: 62 GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115 VTLEPC C+ A+ A I R++Y +P Sbjct: 60 AG-----PRARGGTAVVTLEPCNHTGRTGPCSQALIDAGIARVFYANPDPFPQAAGGADH 114 Query: 116 F 116 Sbjct: 115 L 115 >gi|157117008|ref|XP_001652931.1| cytidine and deoxycytidylate deaminase zinc-binding region [Aedes aegypti] gi|108876253|gb|EAT40478.1| cytidine and deoxycytidylate deaminase zinc-binding region [Aedes aegypti] Length = 376 Score = 70.3 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 7/87 (8%) Query: 43 RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 + L D++ H + D+Y+T EPC MCA A++ +R+RR++Y Sbjct: 294 ESISLDDISPH------EDNLTKYGPYLCTGYDVYLTHEPCIMCAMALTHSRVRRVFYHF 347 Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIY 129 + K GG+ + T+ + +H E++ Sbjct: 348 NTAK-GGLGSITKVHCAKGLNHHYEVF 373 >gi|304391942|ref|ZP_07373884.1| riboflavin biosynthesis protein RibD [Ahrensia sp. R2A130] gi|303296171|gb|EFL90529.1| riboflavin biosynthesis protein RibD [Ahrensia sp. R2A130] Length = 367 Score = 70.3 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 53/156 (33%), Gaps = 21/156 (13%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M L A+ L P VG + V + +++ R K HAE +A+ Sbjct: 13 RTHAEWMGACLRLARRHRGLTGTNPSVGTLLVKDGRVVGRG----ITAKGGRPHAERVAL 68 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 YVTLEPC CA A+ A + ++ +P G Sbjct: 69 DQAG-----PNAVGSIAYVTLEPCAHHGATPPCAQALINAGVAEVHTAYIDPDHRVDGKG 123 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 A ++ G + + ++ + +R Sbjct: 124 HAMLREAE----IAVHAGQGSEIAGSDMRGYLTRKR 155 >gi|282162767|ref|YP_003355152.1| hypothetical protein MCP_0097 [Methanocella paludicola SANAE] gi|282155081|dbj|BAI60169.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 162 Score = 70.3 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 42/128 (32%), Gaps = 30/128 (23%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42 FM A A+ + I VGAV V +I+S N Sbjct: 9 DEYFMEIANVVAKRSTCLR-IHVGAVIVKGGQILSTGYNGAPHGFEHCLDIGCIREKENV 67 Query: 43 ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 EL HAE AI + + +Y T +PC +C I +I R+ Sbjct: 68 AHGTRHELCRAV-HAEQNAIIQAA--IHGVSIEGATVYCTHQPCILCTKMIINCKINRVV 124 Query: 100 Y--GASNP 105 + G + Sbjct: 125 FQNGYPDE 132 >gi|254389244|ref|ZP_05004473.1| riboflavin/cytosine deaminase [Streptomyces clavuligerus ATCC 27064] gi|326444934|ref|ZP_08219668.1| putative deaminase [Streptomyces clavuligerus ATCC 27064] gi|197702960|gb|EDY48772.1| riboflavin/cytosine deaminase [Streptomyces clavuligerus ATCC 27064] Length = 154 Score = 70.3 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 38/114 (33%), Gaps = 14/114 (12%) Query: 2 KKGNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59 + +M A+ A VGAV V ++ +R D HAE A+ Sbjct: 7 DQDLRWMQHAIGLAALCPPAAGAYSVGAVIVGEGGAELATGYSR---EADPRGHAEEAAL 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPK 106 L +Y TLEPC T CA I A I R+ P Sbjct: 64 --AKLPGGDLRLATATIYSTLEPCSQRSADRTPCAGLILRAGIPRVVIAWREPN 115 >gi|302517924|ref|ZP_07270266.1| riboflavin biosynthesis protein RibD [Streptomyces sp. SPB78] gi|302426819|gb|EFK98634.1| riboflavin biosynthesis protein RibD [Streptomyces sp. SPB78] Length = 364 Score = 70.3 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 51/141 (36%), Gaps = 25/141 (17%) Query: 9 SCALEEAQNAALR---NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 A+ A R N + VG V + + ++ ++ HAEI A+R Sbjct: 11 REAIALAARGLGRTRPNPV-VGCVVLDASGEVAGSGWHQRAGG----PHAEIHALRAAG- 64 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 E VTLEPC C+ A+ A +RR+ + ++P G Sbjct: 65 ----ERARGGTALVTLEPCDHTGRTGPCSRALIEAGVRRVVHAVADPTDQATG-GADTQR 119 Query: 119 LATCHHSPEIYPGISEQRSRQ 139 A +I G+ E+ + Sbjct: 120 AAG----VDIEHGLLEREAAD 136 >gi|89100804|ref|ZP_01173656.1| ComEB [Bacillus sp. NRRL B-14911] gi|89084450|gb|EAR63599.1| ComEB [Bacillus sp. NRRL B-14911] Length = 195 Score = 70.3 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 43/116 (37%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49 + FM+ + A + + VGA V + +II+ N + D Sbjct: 5 LSWDQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGDHCIDHGCYVID 63 Query: 50 ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ +I + D+YVT PC C AI A I +YY Sbjct: 64 NHCVRTIHAEMNSILQCAKFGVPT--AGADIYVTHFPCLQCCKAIIQAGIATVYYA 117 >gi|160937837|ref|ZP_02085196.1| hypothetical protein CLOBOL_02729 [Clostridium bolteae ATCC BAA-613] gi|158439276|gb|EDP17029.1| hypothetical protein CLOBOL_02729 [Clostridium bolteae ATCC BAA-613] Length = 181 Score = 70.3 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 33/125 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + FM AL + + P VGA V +NKI+S N Sbjct: 26 ITWDEYFMGVALLSGRRSKD----PSTQVGACIVSQDNKILSMGYNGFPKGCSDDEFPWG 81 Query: 43 RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 + E +D + H+E+ AI L LYVTL PC CA AI + I Sbjct: 82 KENEKEDPYNSKYFYSTHSELNAILN----YRGGSLEGSKLYVTLFPCNECAKAIIQSGI 137 Query: 96 RRLYY 100 + + Y Sbjct: 138 KTIVY 142 >gi|297529318|ref|YP_003670593.1| ComE operon protein 2 [Geobacillus sp. C56-T3] gi|297252570|gb|ADI26016.1| ComE operon protein 2 [Geobacillus sp. C56-T3] Length = 156 Score = 70.3 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------D 49 + FM+ + A + + VGA V + +II+ N + D Sbjct: 4 ITWDQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGAHCTDEGCYVID 62 Query: 50 V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ AI + ++YVT PC C AI + IR +YY Sbjct: 63 GHCVRTIHAEMNAILQCAKFGVPT--EGAEMYVTHFPCLHCCKAIIQSGIRAVYYA 116 >gi|205355636|ref|ZP_03222406.1| putative riboflavin specific deaminase [Campylobacter jejuni subsp. jejuni CG8421] gi|205346413|gb|EDZ33046.1| putative riboflavin specific deaminase [Campylobacter jejuni subsp. jejuni CG8421] Length = 326 Score = 70.3 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 64/177 (36%), Gaps = 44/177 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55 MK +M+ AL EA P VG V + N KI++ +A K AHAE Sbjct: 1 MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNEKILAIKAH-----EKAGLAHAE 52 Query: 56 ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89 + AI + L EI + +VTLEPC CA Sbjct: 53 LNAIAHAFKSLRPEISLPKEVNALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 112 Query: 90 ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 S ++++ + G +F E+ I ++ +++++ F K Sbjct: 113 FSELGFKKIFISVKDENKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLKPFLK 164 >gi|57238634|ref|YP_179765.1| riboflavin biosynthesis protein RibD, putative [Campylobacter jejuni RM1221] gi|57167438|gb|AAW36217.1| riboflavin biosynthesis protein RibD, putative [Campylobacter jejuni RM1221] gi|315059073|gb|ADT73402.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Campylobacter jejuni subsp. jejuni S3] Length = 326 Score = 70.3 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 64/177 (36%), Gaps = 44/177 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55 MK +M+ AL EA P VG V + N KI++ +A K AHAE Sbjct: 1 MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNEKILAIKAH-----EKAGLAHAE 52 Query: 56 ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89 + AI + L EI + +VTLEPC CA Sbjct: 53 LNAIAHAFKSLRPEISLPKEVNALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 112 Query: 90 ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 S ++++ + G +F E+ I ++ +++++ F K Sbjct: 113 FSELGFKKIFISVKDENKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLKPFLK 164 >gi|218563211|ref|YP_002344991.1| riboflavin-specific deaminase/reductase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|112360918|emb|CAL35719.1| riboflavin-specific deaminase/reductase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926817|gb|ADC29169.1| riboflavin-specific deaminase/reductase [Campylobacter jejuni subsp. jejuni IA3902] Length = 336 Score = 70.3 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 64/177 (36%), Gaps = 44/177 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55 MK +M+ AL EA P VG V + N KI++ +A K AHAE Sbjct: 11 MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNEKILAIKAH-----EKAGLAHAE 62 Query: 56 ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89 + AI + L EI + +VTLEPC CA Sbjct: 63 LNAIAHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 122 Query: 90 ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 S ++++ + G +F E+ I ++ +++++ F K Sbjct: 123 FSELGFKKIFISVKDENKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLKPFLK 174 >gi|86149383|ref|ZP_01067614.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596073|ref|ZP_01099310.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp. jejuni 84-25] gi|85840165|gb|EAQ57423.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190914|gb|EAQ94886.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp. jejuni 84-25] Length = 326 Score = 70.3 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 64/177 (36%), Gaps = 44/177 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55 MK +M+ AL EA P VG V + N KI++ +A K AHAE Sbjct: 1 MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNEKILAIKAH-----EKAGLAHAE 52 Query: 56 ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89 + AI + L EI + +VTLEPC CA Sbjct: 53 LNAIAHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 112 Query: 90 ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 S ++++ + G +F E+ I ++ +++++ F K Sbjct: 113 FSELGFKKIFISVKDENKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLKPFLK 164 >gi|270684433|ref|ZP_06222817.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae HK1212] gi|270316231|gb|EFA28189.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae HK1212] Length = 94 Score = 70.3 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 36/98 (36%), Gaps = 17/98 (17%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + VFM AL+ A P VG V V N +I+ + + HAE +A+ Sbjct: 6 SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAIS 91 E YVTLEPC CA + Sbjct: 62 AQAG-----ENAKGATAYVTLEPCSHYGRTPPCALGLI 94 >gi|56421051|ref|YP_148369.1| late competence DNA binding and uptake protein [Geobacillus kaustophilus HTA426] gi|56380893|dbj|BAD76801.1| late competence protein (DNA binding and uptake) [Geobacillus kaustophilus HTA426] Length = 156 Score = 70.3 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------D 49 + FM+ + A + + VGA V + +II+ N + D Sbjct: 4 ITWDQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGAHCTDEGCYVID 62 Query: 50 V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ AI + ++YVT PC C AI + IR +YY Sbjct: 63 GHCVRTIHAEMNAILQCAKFGVPT--EGAEMYVTHFPCLHCCKAIIQSGIRAVYYA 116 >gi|283957008|ref|ZP_06374480.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Campylobacter jejuni subsp. jejuni 1336] gi|283791509|gb|EFC30306.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Campylobacter jejuni subsp. jejuni 1336] Length = 326 Score = 70.3 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 65/177 (36%), Gaps = 44/177 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55 MKK +M+ AL EA P VG V + N KI++ +A K AHAE Sbjct: 1 MKK--FYMNLALNEAWK-YQFLTYPNPAVGCVILDKNEKILAIKAH-----EKAGLAHAE 52 Query: 56 ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89 + AI + L EI + +VTLEPC CA Sbjct: 53 LNAIAHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 112 Query: 90 ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 S ++++ + G +F E+ I ++ +++++ F K Sbjct: 113 FSELGFKKIFISVKDENKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLKPFLK 164 >gi|209548782|ref|YP_002280699.1| riboflavin biosynthesis protein RibD [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534538|gb|ACI54473.1| riboflavin biosynthesis protein RibD [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 404 Score = 70.3 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 44/139 (31%), Gaps = 21/139 (15%) Query: 4 GNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FM+ A+ ++ VG + V + ++ +A HAE Sbjct: 7 DESFMAAAIRLSRRHLGRTATNPSVGCLIVRDGVVVGQAVTAVGGR----PHAEPQ---- 58 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YVTLEPC CA A+ + R+ ++P G Sbjct: 59 -ALAEAGAAARGATAYVTLEPCSHHGKTPPCAEALIAYGVARVVISVTDPDPRVSGRGIA 117 Query: 116 FYTLATCHHSPEIYPGISE 134 A E+ G+ E Sbjct: 118 MLREAG----IEVDAGVLE 132 >gi|313229170|emb|CBY23755.1| unnamed protein product [Oikopleura dioica] Length = 123 Score = 70.3 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 1/89 (1%) Query: 48 KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 K+ HA + + + + IL +++Y+ EPC MC+ A+S +RI+RL+Y Sbjct: 28 KNPLGHAALNLVAKAA-GMGEYILTGLEVYMYREPCLMCSMALSHSRIKRLFYLKKCGTD 86 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQR 136 G +TL +H +++ G E R Sbjct: 87 GSCGTRESIHTLPALNHRFQVFYGGFEDR 115 >gi|329946974|ref|ZP_08294386.1| riboflavin biosynthesis protein RibD [Actinomyces sp. oral taxon 170 str. F0386] gi|328526785|gb|EGF53798.1| riboflavin biosynthesis protein RibD [Actinomyces sp. oral taxon 170 str. F0386] Length = 400 Score = 70.3 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 44/127 (34%), Gaps = 18/127 (14%) Query: 26 VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 VG V + + +++ +R TAHAE+ A+ + VTLEPC Sbjct: 46 VGCVILSADGDVLAEGHHR----GAGTAHAEVDALTNLAAAGASA--QGTTAVVTLEPCD 99 Query: 85 M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 C A+ A + + Y +P + G+ Q + Sbjct: 100 HEGRTGPCVQALLAAGVAEVIYAQDDPTEQAGGGAATLEAA-----GVRVRRGLCSQDAA 154 Query: 139 QIIQDFF 145 ++ + +F Sbjct: 155 RLNRPWF 161 >gi|328709609|ref|XP_001952788.2| PREDICTED: hypothetical protein LOC100161474 [Acyrthosiphon pisum] Length = 373 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 33/126 (26%), Positives = 47/126 (37%), Gaps = 30/126 (23%) Query: 5 NVFMSCALEEAQNAALRNEIPV---GAVAV-LNNKIISRAGN---------------RNR 45 N+FM+ A A + PV GA V +N I+ N Sbjct: 221 NLFMAIAYLTAMRSKD----PVCQVGACIVNSDNTIVGTGYNGMPTGCNDDEFPWGNNKN 276 Query: 46 ELKDV---TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 + HAE+ A+ S + + LYVT PC CA I + I+ + Y Sbjct: 277 LTLNKFIYVCHAEMNAV---FYKSSMINVKDCTLYVTRFPCIECAKIIIQSGIKEVVY-L 332 Query: 103 SNPKGG 108 +NPK G Sbjct: 333 TNPKYG 338 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 19/112 (16%) Query: 1 MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNK-IISRAGNRNRELKD-------- 49 + ++FM+ A A+ + VGA V ++K I+ N + Sbjct: 68 LSWDDLFMAIAFLTAKCNKDLKKK---VGACIVDSDKKIVGIGYNGMPTGCNNGNFLDHK 124 Query: 50 -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + ++V+L PC+ A I + I+ + Y Sbjct: 125 FAQCHAEMNAILN----KNSIHIQNCTIFVSLYPCSEAAKIIIQSGIKEVVY 172 >gi|304437889|ref|ZP_07397836.1| competence protein ComEB [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369111|gb|EFM22789.1| competence protein ComEB [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 158 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 44/134 (32%), Gaps = 33/134 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKD------- 49 + FM AL A + P VGA V +K I+ N D Sbjct: 3 ISWDEYFMGVALFSAYRSKD----PHTQVGACIVNEDKHIVGVGYNGMPNGCDDHEYPWG 58 Query: 50 VTA-----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 T HAE+ AI L +Y +L PC C AI + IR + Sbjct: 59 RTGEFAEQKYPYVVHAELNAILNA-----STSLKGCRIYTSLFPCNECCKAIIQSGIREV 113 Query: 99 YYGASNPKGGGIEN 112 Y + K ++ Sbjct: 114 IY--LSDKYAAADS 125 >gi|330796315|ref|XP_003286213.1| hypothetical protein DICPUDRAFT_30558 [Dictyostelium purpureum] gi|325083800|gb|EGC37243.1| hypothetical protein DICPUDRAFT_30558 [Dictyostelium purpureum] Length = 226 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 44/122 (36%), Gaps = 15/122 (12%) Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 N ++ N ++ +H EI+AI + + LY T EPC MCA A+ Sbjct: 89 NGTLMCTGVNM--GKPNIISHGEIVAINNCTELHGITVFTNYTLYTTGEPCAMCAGALVW 146 Query: 93 ARIRRLYYGASNPKGGG--------IENGTQFYTLATCH-HSPEIYPGISEQRSRQIIQD 143 A + + +G N +++ F S + G+ ++ Sbjct: 147 ADFKTVVWGTYNSDLLCKICMSNIPMDSAYIFGRSYGLRSSSTTLIGGVRRAQADA---- 202 Query: 144 FF 145 FF Sbjct: 203 FF 204 >gi|219118282|ref|XP_002179919.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217408972|gb|EEC48905.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 123 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 40/120 (33%), Gaps = 14/120 (11%) Query: 8 MSCALEEAQNAALRN-EIPVGAVAVLNN------KIISRAGNRNRELKDVTAHAEILAIR 60 M+ A+E ++ P G + +I S NR L + + H E+ A++ Sbjct: 3 MAVAVEISRLNVEHKSGGPFGCAIFERDLSTNTCRIFSVGANRVMPLHNSSLHGEMTALQ 62 Query: 61 MGCRILSQEILP-------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113 R L L E + + EPC C A + GAS I Sbjct: 63 FAERKLQHFSLKTEKDSPKEYVMCTSCEPCAQCLGGTLWAGPAEMICGASKDDAEAIGFN 122 >gi|15643170|ref|NP_228214.1| deoxycytidylate deaminase, putative [Thermotoga maritima MSB8] gi|4980909|gb|AAD35489.1|AE001720_3 deoxycytidylate deaminase, putative [Thermotoga maritima MSB8] Length = 201 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 26/120 (21%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR-------NRELKDVTA---- 52 + FM A ++ + VGAV V +++I++ N+ E+ + Sbjct: 57 DSYFMRIARMVSERSTCV-HRKVGAVIVKDHRILATGYNQPPSKFPHCNEIGCIRDDLEI 115 Query: 53 ------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE A+ + + +YVT +PC++CA I A I+R+ Y Sbjct: 116 NSGEHQEICYALHAEQNALMQAAKFGIA--VNGATIYVTHKPCSICARLIVNAGIKRVVY 173 >gi|295399242|ref|ZP_06809224.1| ComE operon protein 2 [Geobacillus thermoglucosidasius C56-YS93] gi|312110156|ref|YP_003988472.1| ComE operon protein 2 [Geobacillus sp. Y4.1MC1] gi|294978708|gb|EFG54304.1| ComE operon protein 2 [Geobacillus thermoglucosidasius C56-YS93] gi|311215257|gb|ADP73861.1| ComE operon protein 2 [Geobacillus sp. Y4.1MC1] Length = 151 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------D 49 + FM+ + A + + VGA V + +II+ N + D Sbjct: 4 ITWDQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGAHCIDEGCYIID 62 Query: 50 V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ AI + ++YVT PC C AI + IR +YY Sbjct: 63 GHCVRTIHAEMNAIIQCAKFGVPT--EGAEMYVTHFPCLHCCKAIIQSGIRAVYYA 116 >gi|212638664|ref|YP_002315184.1| Late competence protein ComEB [Anoxybacillus flavithermus WK1] gi|212560144|gb|ACJ33199.1| Late competence protein ComEB (DNA binding and uptake) [Anoxybacillus flavithermus WK1] Length = 155 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49 + FM+ + A + + VGA V + +II+ N + Sbjct: 4 ITWDQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGAHCIDEGCYVID 62 Query: 50 ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ AI + ++YVT PC C AI + I+ +YY Sbjct: 63 NHCVRTIHAEMNAILQCAKFGVPT--EGAEIYVTHFPCLQCCKAIIQSGIKAVYYA 116 >gi|312863405|ref|ZP_07723643.1| putative ComE operon protein 2 [Streptococcus vestibularis F0396] gi|322516047|ref|ZP_08068984.1| competence protein comEB [Streptococcus vestibularis ATCC 49124] gi|311100941|gb|EFQ59146.1| putative ComE operon protein 2 [Streptococcus vestibularis F0396] gi|322125462|gb|EFX96808.1| competence protein comEB [Streptococcus vestibularis ATCC 49124] Length = 151 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 46/122 (37%), Gaps = 18/122 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V +N+II+ N D T HAE+ A+ + Sbjct: 29 VGAVLVKDNRIIATGYNGGVSETDNCNEVGHYMEDGHCIRTVHAEMNALIQCAKEGIST- 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY-GASNPKGGGIENGTQFYTLATCHHSPEIY 129 ++YVT PC C A+ A + ++ Y P IE Q H PE++ Sbjct: 88 -KNTEIYVTHFPCINCTKALLQAGVVKITYKANYRPHAFAIELMEQKGVSYVQHDVPEVH 146 Query: 130 PG 131 G Sbjct: 147 LG 148 >gi|298675909|ref|YP_003727659.1| CMP/dCMP deaminase zinc-binding protein [Methanohalobium evestigatum Z-7303] gi|298288897|gb|ADI74863.1| CMP/dCMP deaminase zinc-binding protein [Methanohalobium evestigatum Z-7303] Length = 155 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 44/136 (32%), Gaps = 28/136 (20%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42 F+ A A+ A VGAV V + +IIS N Sbjct: 11 DEYFLEIASVVAKRATCLRNK-VGAVIVRDKRIISTGYNGAPSNLEHCLDIGCIRQQYNI 69 Query: 43 ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 E HAE AI +Y T +PC +CA I A I+++ Sbjct: 70 ESGTQHEKCRAV-HAEQNAIIQAALHGVSTD--NATIYCTHQPCILCAKMIINANIKKVI 126 Query: 100 YGASNPKGGGIENGTQ 115 Y + P ++ + Sbjct: 127 YFSDYPDDEALKFLSD 142 >gi|241955527|ref|XP_002420484.1| DRAP deaminase, putative; pseudouridine synthase, putative [Candida dubliniensis CD36] gi|223643826|emb|CAX41563.1| DRAP deaminase, putative [Candida dubliniensis CD36] Length = 589 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 20/151 (13%) Query: 6 VFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM A++EA+ + + VG V V N ++IS +R HAE A+ Sbjct: 439 KFMEMAIKEAEKCGKTQTQFNVGCVLVHNGQVISTGHSRELPGN---THAEQCALEKYFS 495 Query: 65 ILSQEI--LPEVDLYVTLEPC-------TMCAAAISLAR-IRRLYYGASNPKGGGIENGT 114 E +++ ++EPC C I + I+ + G P ++N + Sbjct: 496 KNGGEREVPSGTEIFTSMEPCSLRLSGNLPCVDRILQTKSIKTCFVGVLEPDI-FVKNNS 554 Query: 115 QFYTLATCHHSPEI--YPGISEQRSRQIIQD 143 + L H E PG E+ +I + Sbjct: 555 SYKKL--LDHGVEYIHIPGY-EETCLEIAKR 582 >gi|239827788|ref|YP_002950412.1| ComE operon protein 2 [Geobacillus sp. WCH70] gi|239808081|gb|ACS25146.1| ComE operon protein 2 [Geobacillus sp. WCH70] Length = 151 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------D 49 + FM+ + A + + VGA V + +II+ N + D Sbjct: 4 ITWDQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGAHCIDEGCYVID 62 Query: 50 V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ AI + ++YVT PC C AI + IR +YY Sbjct: 63 GHCVRTIHAEMNAIIQCAKFGVPT--EGAEMYVTHFPCLHCCKAIIQSGIRAVYYA 116 >gi|161506809|ref|YP_001576763.1| dCMP deaminase [Lactobacillus helveticus DPC 4571] gi|260102228|ref|ZP_05752465.1| cytidine/deoxycytidylate deaminase [Lactobacillus helveticus DSM 20075] gi|160347798|gb|ABX26472.1| DCMP deaminase [Lactobacillus helveticus DPC 4571] gi|260083969|gb|EEW68089.1| cytidine/deoxycytidylate deaminase [Lactobacillus helveticus DSM 20075] Length = 159 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 18/111 (16%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------DV--- 50 FM AL AQ + + VG+V V +N+II N + + D Sbjct: 9 QYFMMQALVIAQRSTCNRAL-VGSVLVKDNRIIGTGYNGSVSGQPHCDEVGHQMVDGHCV 67 Query: 51 -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H+E+ AI + + ++YVT PC C ++ A ++++ Y Sbjct: 68 RTIHSEMNAIIQCAKFGVSTD--DTEIYVTHFPCYNCCKSLFQAGVKKINY 116 >gi|156096476|ref|XP_001614272.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148803146|gb|EDL44545.1| hypothetical protein, conserved [Plasmodium vivax] Length = 245 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 36/79 (45%) Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 E L + VT EPC MC A+ L I+ +Y+ N + GG + + + I Sbjct: 152 ESLRNCCIVVTCEPCIMCVYALKLMGIKDIYFCCLNERFGGCGSVLSLHKTYQDINVNYI 211 Query: 129 YPGISEQRSRQIIQDFFKE 147 G +RS ++Q F+K Sbjct: 212 KTGGCTERSISLMQSFYKA 230 Score = 51.4 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 7 FMSCALEEAQNA--ALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRM 61 F++ AL EA+ + A E+P+ + + +I+S + N E K+ + H E++AI Sbjct: 12 FLNIALGEAEKSLQAELKEMPIFCLLINEQREILSSSYNHTNESKNGSRHCELIAIDK 69 >gi|50555826|ref|XP_505321.1| YALI0F12199p [Yarrowia lipolytica] gi|49651191|emb|CAG78128.1| YALI0F12199p [Yarrowia lipolytica] Length = 605 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 18/115 (15%) Query: 4 GNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 FM A+ EA + P VGAV V + +++ +R HAE A+ Sbjct: 457 HKKFMDLAVAEADKSE---GTPSAFCVGAVLVKDGQVLETGFSRELPGN---THAEQCAL 510 Query: 60 RMGCRILSQEILPE-VDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPK 106 + +PE +Y T+EPC C I + I+ ++ G P Sbjct: 511 EKYFAKNNVSDVPENTVIYTTMEPCSERLSGNLPCVDRILNSSIKTVFVGVLEPD 565 >gi|148543876|ref|YP_001271246.1| ComE operon protein 2 [Lactobacillus reuteri DSM 20016] gi|184153276|ref|YP_001841617.1| dCMP deaminase [Lactobacillus reuteri JCM 1112] gi|194468431|ref|ZP_03074417.1| ComE operon protein 2 [Lactobacillus reuteri 100-23] gi|227364782|ref|ZP_03848831.1| competence protein ComEB [Lactobacillus reuteri MM2-3] gi|227545004|ref|ZP_03975053.1| competence protein ComEB [Lactobacillus reuteri CF48-3A] gi|300909961|ref|ZP_07127421.1| ComE operon protein comEB [Lactobacillus reuteri SD2112] gi|325682591|ref|ZP_08162108.1| competence protein comEB [Lactobacillus reuteri MM4-1A] gi|148530910|gb|ABQ82909.1| ComE operon protein 2 [Lactobacillus reuteri DSM 20016] gi|183224620|dbj|BAG25137.1| dCMP deaminase [Lactobacillus reuteri JCM 1112] gi|194453284|gb|EDX42182.1| ComE operon protein 2 [Lactobacillus reuteri 100-23] gi|227070241|gb|EEI08615.1| competence protein ComEB [Lactobacillus reuteri MM2-3] gi|227185021|gb|EEI65092.1| competence protein ComEB [Lactobacillus reuteri CF48-3A] gi|300892609|gb|EFK85969.1| ComE operon protein comEB [Lactobacillus reuteri SD2112] gi|324978430|gb|EGC15380.1| competence protein comEB [Lactobacillus reuteri MM4-1A] Length = 161 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 43/115 (37%), Gaps = 18/115 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-----------LKD 49 + FM A A + + VGAV V + +II+ N + L+D Sbjct: 5 IDWDQYFMIQAALLASRSTCNR-LSVGAVLVRDKRIIAGGYNGSVAGDAHCIDEGCYLRD 63 Query: 50 V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ + +YVT PC C ++ I+ + Y Sbjct: 64 GHCVRTIHAEMNALLQCAKFGISAD--GASIYVTDFPCLQCTKSLLQTGIKEINY 116 >gi|329117421|ref|ZP_08246138.1| putative ComE operon protein 2 [Streptococcus parauberis NCFD 2020] gi|326907826|gb|EGE54740.1| putative ComE operon protein 2 [Streptococcus parauberis NCFD 2020] Length = 153 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 46/122 (37%), Gaps = 18/122 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V +N+II+ N D T HAE+ A+ + Sbjct: 29 VGAVLVKDNRIIATGYNGGVSATDNCDEAGHYMEDGHCIRTVHAEMNALIQCAKEGIST- 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY-GASNPKGGGIENGTQFYTLATCHHSPEIY 129 +LYVT PC C A+ A I+ + Y P IE + + H PEI Sbjct: 88 -AGTELYVTHFPCINCTKALLQAGIKAITYKAHYRPHPFAIELMEKKGVVYQQHDVPEIK 146 Query: 130 PG 131 G Sbjct: 147 LG 148 >gi|322373694|ref|ZP_08048230.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus sp. C150] gi|321278736|gb|EFX55805.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus sp. C150] Length = 151 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 18/122 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V +N+II+ N D T HAE+ A+ + Sbjct: 29 VGAVLVKDNRIIATGYNGGVSETDNCNEVGHYMEDGHCIRTVHAEMNALIQCAKEGIST- 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH-SPEIY 129 ++YVT PC C A+ A I ++ Y A+ G Q ++ H PE+ Sbjct: 88 -KNTEIYVTHFPCINCTKALLQAGIVKITYKANYRPHGFAMELMQQKGVSYVQHDVPEVR 146 Query: 130 PG 131 G Sbjct: 147 LG 148 >gi|327403586|ref|YP_004344424.1| CMP/dCMP deaminase zinc-binding protein [Fluviicola taffensis DSM 16823] gi|327319094|gb|AEA43586.1| CMP/dCMP deaminase zinc-binding protein [Fluviicola taffensis DSM 16823] Length = 150 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 15/109 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV-----T 51 ++ A A+ + + VGA+ V + +IIS N E ++ Sbjct: 18 DKAYLRMAQTWAELSHCERKK-VGALIVRDGRIISDGYNGTPAGFENCCEDQNGNTQWYV 76 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI R S L++TL PC C+ + A I+R+ Y Sbjct: 77 LHAEANAILKVAR--STNDCSGATLFITLSPCKDCSKLVLQAGIKRVVY 123 >gi|229543791|ref|ZP_04432851.1| ComE operon protein 2 [Bacillus coagulans 36D1] gi|229328211|gb|EEN93886.1| ComE operon protein 2 [Bacillus coagulans 36D1] Length = 200 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + T HAE+ AI + Sbjct: 28 VGATIVRDKRIIAGGYNGSIAGDEHCIDKGCYVIDGHCVRTIHAEMNAILQCAKFGVATN 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 DLYVT PC C AI A I+ +YY Sbjct: 88 --GADLYVTHYPCLHCTKAIIQAGIQNVYYA 116 >gi|256072191|ref|XP_002572420.1| deoxycytidylate deaminase [Schistosoma mansoni] gi|238657578|emb|CAZ28651.1| deoxycytidylate deaminase, putative [Schistosoma mansoni] Length = 175 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 44/131 (33%), Gaps = 32/131 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN---RNRELKDVTA- 52 + FMS AL A + P VGA V KI+ N DV Sbjct: 21 ISWDEYFMSIALLSAMRSKD----PSTQVGACIVNQEKKIVGIGYNGMPNGILDDDVPWG 76 Query: 53 ---------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 HAE+ A+ S L+ T+ PC CA I A I+ Sbjct: 77 KGSANELENKYLYVCHAELNAVLNRNEAHSG----GCTLFTTMFPCNECAKVIIQAGIKE 132 Query: 98 LYYGASNPKGG 108 + Y S+ K G Sbjct: 133 VVY-YSDKKNG 142 >gi|146096702|ref|XP_001467899.1| hypothetical protein [Leishmania infantum JPCM5] gi|134072265|emb|CAM70970.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 542 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 +DLYVT EPC MCA A+ +RI R+++ N GG+ + + +A+ +H Y Sbjct: 473 NGLDLYVTHEPCVMCAMALVHSRIHRVFFLFRNAVHGGLGSRYNLHLMASLNHHFSAYEC 532 Query: 132 ISEQRSRQI 140 + ++ Sbjct: 533 ---TEAAEL 538 >gi|319442108|ref|ZP_07991264.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil [Corynebacterium variabile DSM 44702] Length = 353 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 42/124 (33%), Gaps = 21/124 (16%) Query: 14 EAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72 +A PVGAV + + ++ G HAE+ A+ Sbjct: 28 QAVRGTTSPNPPVGAVILSVDGDVVGTGGTSPVGG----PHAEVNALAEAGEKA-----R 78 Query: 73 EVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 VTLEPC CA A+ A I R+ Y ++P G G +F H Sbjct: 79 GGTAVVTLEPCNHTGRTGPCALALLEAGIARVVYAFADP-GDAEGGGAEFLRS----HGV 133 Query: 127 EIYP 130 + Sbjct: 134 PVTG 137 >gi|157363614|ref|YP_001470381.1| CMP/dCMP deaminase zinc-binding [Thermotoga lettingae TMO] gi|157314218|gb|ABV33317.1| CMP/dCMP deaminase zinc-binding [Thermotoga lettingae TMO] Length = 186 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 41/120 (34%), Gaps = 26/120 (21%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN---RELKDVTA-------- 52 FM + + VGAV V N+I++ N+ D T Sbjct: 35 DEYFMRICYIVKERSTCT-HRKVGAVIVRENRILATGYNQPPSAFPHCDSTGCIRDHLRI 93 Query: 53 ------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE A+ + +YVT +PC++CA + A I R+ Y Sbjct: 94 PSGQNQEICYALHAEQNALMQAAKFGISTN--GATMYVTTKPCSVCARLLVNAGITRVVY 151 >gi|325570545|ref|ZP_08146271.1| competence protein comEB [Enterococcus casseliflavus ATCC 12755] gi|325156391|gb|EGC68571.1| competence protein comEB [Enterococcus casseliflavus ATCC 12755] Length = 165 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 20/113 (17%) Query: 4 GNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRE---------------L 47 FM+ A+ + + R E VGA V + +II+ N + Sbjct: 9 DQYFMAQAVLLSLRSTCSRLE--VGATLVKDRRIIAGGYNGSVSGDVHCIDDGCYVVDDH 66 Query: 48 KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ ++ ++YVT PC C AI A +++++Y Sbjct: 67 CIRTIHAEMNALLQCAKLGVSTD--NAEIYVTHFPCLPCTKAILQAGVKKIHY 117 >gi|66802007|ref|XP_629827.1| hypothetical protein DDB_G0292096 [Dictyostelium discoideum AX4] gi|60463211|gb|EAL61404.1| hypothetical protein DDB_G0292096 [Dictyostelium discoideum AX4] Length = 321 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 9/98 (9%) Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 ++ +H EI+AI + LY + EPC MC+AA+ A + + +G N Sbjct: 103 NIISHGEIVAINNCTALHGITSFTNYTLYTSGEPCAMCSAALLWADFKTIVWGTFNSDLL 162 Query: 109 G--IENGTQFYTLATCHHS-------PEIYPGISEQRS 137 + + P + G+ + Sbjct: 163 CKICMSNIPMDSSYIFGRYYGLRASPPRVIGGVLRTEA 200 >gi|322501868|emb|CBZ36951.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 542 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 +DLYVT EPC MCA A+ +RI R+++ N GG+ + + +A+ +H Y Sbjct: 473 NGLDLYVTHEPCVMCAMALVHSRIHRVFFLFRNAVHGGLGSRYNLHLMASLNHHFSAYEC 532 Query: 132 ISEQRSRQI 140 + ++ Sbjct: 533 ---TEAAEL 538 >gi|314055285|ref|YP_004063623.1| putative CMP/dCMP deaminase zinc-binding [Ostreococcus tauri virus 2] gi|313575176|emb|CBI70189.1| putative CMP/dCMP deaminase zinc-binding [Ostreococcus tauri virus 2] Length = 136 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 14/111 (12%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR-----------NRELKD 49 + FM A E A + + + VG V V NN++IS N + Sbjct: 5 ISWNEYFMKTA-ELASVRSPCDRLNVGCVLVKNNRLISMGYNGFLGGSNHTSIVRDGHEQ 63 Query: 50 VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAEI A+ + + ++Y+T PC C A++ + +++++Y Sbjct: 64 ATIHAEINAVTDAAKRGVS--IDGTEVYITHYPCLNCYKALASSGVKKIHY 112 >gi|294900049|ref|XP_002776874.1| riboflavin-specific deaminase, putative [Perkinsus marinus ATCC 50983] gi|239884075|gb|EER08690.1| riboflavin-specific deaminase, putative [Perkinsus marinus ATCC 50983] Length = 332 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 60/157 (38%), Gaps = 26/157 (16%) Query: 3 KGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNK-IISRAGNRNRELKDVTAHAEIL 57 FM AL E++ + P VG + V + + ++ + + + HAE+ Sbjct: 10 TDEDFMRMALVESEEGRMT--TPPNPWVGCILVQHGQVVVGKGHHVRKGG----PHAEVN 63 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+R + S + YVTLEPC C A+ + R+ G +P Sbjct: 64 ALRDMIQSGST-----LTAYVTLEPCSHYGSTPPCCEALIEVGVGRVVVGVEDPDPKVSG 118 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 G Q A ++ G R+ ++ + K+R Sbjct: 119 RGIQRMREAG----VDVKTGCLTGEIRESLRAYLKQR 151 >gi|323138569|ref|ZP_08073637.1| riboflavin biosynthesis protein RibD [Methylocystis sp. ATCC 49242] gi|322396203|gb|EFX98736.1| riboflavin biosynthesis protein RibD [Methylocystis sp. ATCC 49242] Length = 376 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 41/128 (32%), Gaps = 17/128 (13%) Query: 3 KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM+ AL + VGA+ V + II+R K HA Sbjct: 12 TDEAFMAAALALGRRNMGRTAPNPAVGALVVRDGIIIARGW----TAKGGRPHA-----E 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + E LYVTLEPC C AI + I R+ +P G Sbjct: 63 AIALAAAGEAARGATLYVTLEPCSHHGSTPPCVDAIIASGIARVVTAMEDPDPRVAGRGH 122 Query: 115 QFYTLATC 122 Q A Sbjct: 123 QILRDAGI 130 >gi|186681940|ref|YP_001865136.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102] gi|186464392|gb|ACC80193.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102] Length = 143 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 54/143 (37%), Gaps = 21/143 (14%) Query: 3 KGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +FM AL +++ A PVG V V +I+++ + HAE A+ Sbjct: 2 DNIIFMLAALAQSRKALPECLPNPPVGCVNVDVQEIVAQGYTQVPGKH----HAEADAL- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISL-ARIRRLYYGASNPKGGGIENG 113 + + + + +YVTLEPC CA AI+ RI +Y +P G Sbjct: 57 ---KRIQGKGFNFLKMYVTLEPCSFHGRTPACALAIAEDCRIHEIYVSILDPDPRNNGQG 113 Query: 114 TQFYTLATCHHSPEIYPGISEQR 136 A +Y G+ Sbjct: 114 LDILRKAG----KTVYVGLCANE 132 >gi|158522090|ref|YP_001529960.1| riboflavin biosynthesis protein RibD [Desulfococcus oleovorans Hxd3] gi|158510916|gb|ABW67883.1| riboflavin biosynthesis protein RibD [Desulfococcus oleovorans Hxd3] Length = 363 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 57/153 (37%), Gaps = 22/153 (14%) Query: 3 KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM+ AL A+ VGAV V + +++ + + HAE++AI Sbjct: 2 DDTYFMNMALGLAERGTGFTSPNPVVGAVVVRDGRVVGQGFHAAAGK----PHAEVVAID 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + DLYVTLEPC C I A I R+ + G Sbjct: 58 DAGELA-----RGADLYVTLEPCNHTGRTPPCTRKICDAGIARVVVATIDSNPHVAGGGI 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 Q+ + G+ E +++ I ++F + Sbjct: 113 QYLESRG----IAVTVGVCEAEAKKQI-EWFAK 140 >gi|306826735|ref|ZP_07460037.1| competence protein ComEB [Streptococcus pyogenes ATCC 10782] gi|304431024|gb|EFM34031.1| competence protein ComEB [Streptococcus pyogenes ATCC 10782] Length = 163 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V +N+II+ N D T HAE+ A+ + Sbjct: 39 VGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEDGHCIRTVHAEMNALIQCAKEGISTD 98 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++YVT PC C A+ A I ++ Y Sbjct: 99 --GTEIYVTHFPCINCTKALLQAGITKITY 126 >gi|257869951|ref|ZP_05649604.1| cytidine/deoxycytidylate deaminase [Enterococcus gallinarum EG2] gi|257804115|gb|EEV32937.1| cytidine/deoxycytidylate deaminase [Enterococcus gallinarum EG2] Length = 180 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 20/113 (17%) Query: 4 GNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRE---------------L 47 FM+ A+ + + R E VGA V + +II+ N + Sbjct: 24 DQYFMAQAVLLSLRSTCSRLE--VGATLVKDRRIIAGGYNGSVSGDVHCIDEGCYVVDGH 81 Query: 48 KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ ++ ++YVT PC C AI A +++++Y Sbjct: 82 CIRTIHAEMNALLQCAKLGVSTD--NAEIYVTHFPCLPCTKAILQAGVKKIHY 132 >gi|29830662|ref|NP_825296.1| riboflavin/cytosine deaminase [Streptomyces avermitilis MA-4680] gi|29607774|dbj|BAC71831.1| putative diaminohydroxyphosphoribosylaminopyrimi dine deaminase (N-terminal)/ 5-amino-6-(5-phosphoribosylamino) uracil reductase [Streptomyces avermitilis MA-4680] Length = 376 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 31/128 (24%), Positives = 45/128 (35%), Gaps = 26/128 (20%) Query: 4 GNVFMSCALEEA------QNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEI 56 +++ A E A + A VGAV V + ++R +R E D HAE Sbjct: 231 DRHWLALACELADRCPPSRTAFS-----VGAVIVAADGTELARGHSR--EGGDPVVHAEE 283 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCT-------MCAAAISLARIRRLYYGASNPK--- 106 A+ L +Y +LEPC CA I A +RR+ P Sbjct: 284 AAL--AKLDAEDPRLAGATVYSSLEPCARRTSRPRPCARLILDAGVRRVVTAWREPDTFV 341 Query: 107 GGGIENGT 114 +G Sbjct: 342 AAADGSGV 349 >gi|195427655|ref|XP_002061892.1| GK17242 [Drosophila willistoni] gi|194157977|gb|EDW72878.1| GK17242 [Drosophila willistoni] Length = 203 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 43/120 (35%), Gaps = 31/120 (25%) Query: 4 GNVFMSCALEEAQNAALRNEIPV---GAVAV-LNNKIISRAGNR--NRELKDV------- 50 + FM+ AL A+ + PV GA V N+I++ N DV Sbjct: 50 DDYFMAMALLSAKRSKD----PVTQVGACIVDKQNRIVAIGYNGFPRNCSDDVFPWTKNS 105 Query: 51 ----------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI + L LY TL PC C I + I+R+ Y Sbjct: 106 EDSMEDKKLYVVHAEANAILN----SNSTSLVGTCLYTTLFPCNECTKLIIQSGIQRVLY 161 >gi|50284759|ref|XP_444807.1| hypothetical protein [Candida glabrata CBS 138] gi|49524109|emb|CAG57698.1| unnamed protein product [Candida glabrata] Length = 329 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 62/160 (38%), Gaps = 25/160 (15%) Query: 1 MKKGNVFMSCALEEAQN-AALRNEIPVGAVAV----LNNKIIS---RAGNRNRELKDVTA 52 M + N ++ EE++ +P+ +V V + II+ R+ + L Sbjct: 158 MDEINFYLKIIQEESKRIGKESGSLPIVSVFVDPKFKGDFIIAVDQRSHSEEEHLSLKID 217 Query: 53 HAEILAIRMGCRILSQEI-LPEV------------DLYVTLEPCTMCAAAISLARIRRLY 99 H+ ++ I + L + D+Y T EPC+MC+ A+ +RI+R Sbjct: 218 HSIMVGINKVANTEKKRRSLEDCNNVPQNYLCLDFDVYTTHEPCSMCSMALIHSRIKRCI 277 Query: 100 YGASNPKGGGI----ENGTQFYTLATCHHSPEIYPGISEQ 135 + + G + N + + E+Y I ++ Sbjct: 278 FIEQMARTGALMANSGNSYCMHANKKLNSKYEVYKWIGDE 317 >gi|149278806|ref|ZP_01884941.1| cytidine/deoxycytidylate deaminase (dCMP deaminase) [Pedobacter sp. BAL39] gi|149230425|gb|EDM35809.1| cytidine/deoxycytidylate deaminase (dCMP deaminase) [Pedobacter sp. BAL39] Length = 150 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 25/136 (18%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------RN 44 ++FM+ A E A+ + VGAV + +IIS N + Sbjct: 8 HIFMNLASELAERSHCVRAH-VGAVLTKDTRIISIGYNGPPAETHNCDEEWPETGCARDS 66 Query: 45 RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GA 102 R + HAE AI + + + LY TL PC CA I + I+ +Y+ Sbjct: 67 RGSCSLALHAEENAILYASK--NGSKIEGSTLYTTLSPCIACARLILSSGIKLVYFKDSY 124 Query: 103 SNPKGGGIENGTQFYT 118 + KG + G F Sbjct: 125 AEYKGLASDEGVDFLR 140 >gi|225017541|ref|ZP_03706733.1| hypothetical protein CLOSTMETH_01468 [Clostridium methylpentosum DSM 5476] gi|224949691|gb|EEG30900.1| hypothetical protein CLOSTMETH_01468 [Clostridium methylpentosum DSM 5476] Length = 145 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 47/122 (38%), Gaps = 32/122 (26%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN--------------RNRELKD 49 M AL AQ + P VGA V +NKI+S N E D Sbjct: 1 MGIALLSAQRSKD----PNTQVGACIVGQDNKILSLGYNGMPIGCSDDELPWSNQGEALD 56 Query: 50 V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 HAE+ AI + S + L LY TL PC CA AI + I+ + Y S+ Sbjct: 57 TKYLFVCHAELNAI-----LNSGKDLSGAKLYTTLFPCNECAKAIIQSGIKEVVY-CSDK 110 Query: 106 KG 107 Sbjct: 111 YA 112 >gi|254168071|ref|ZP_04874919.1| hypothetical protein ABOONEI_218 [Aciduliprofundum boonei T469] gi|254168095|ref|ZP_04874942.1| hypothetical protein ABOONEI_712 [Aciduliprofundum boonei T469] gi|289596025|ref|YP_003482721.1| CMP/dCMP deaminase zinc-binding protein [Aciduliprofundum boonei T469] gi|197622861|gb|EDY35429.1| hypothetical protein ABOONEI_712 [Aciduliprofundum boonei T469] gi|197623114|gb|EDY35681.1| hypothetical protein ABOONEI_218 [Aciduliprofundum boonei T469] gi|289533812|gb|ADD08159.1| CMP/dCMP deaminase zinc-binding protein [Aciduliprofundum boonei T469] Length = 161 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 43/126 (34%), Gaps = 26/126 (20%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR--------------NRELKD 49 FM A + + VGAV V + +I++ N EL Sbjct: 6 DEYFMRMAYLASTRSTCTRRK-VGAVIVKDKRILATGYNGPPKGLAHCDVTGCIREELNV 64 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE AI + + + +YVT PC +CA + A I+ + Y Sbjct: 65 PSGERHELCRGLHAEQNAIIQAA--VHGVSIKDATIYVTNHPCVVCAKMLINAEIKEIVY 122 Query: 101 GASNPK 106 P Sbjct: 123 AEGYPD 128 >gi|59714100|ref|YP_206875.1| deoxycytidylate deaminase [Vibrio fischeri ES114] gi|197337866|ref|YP_002158583.1| RibG [Vibrio fischeri MJ11] gi|59482348|gb|AAW87987.1| deoxycytidylate deaminase [Vibrio fischeri ES114] gi|197315118|gb|ACH64567.1| RibG [Vibrio fischeri MJ11] Length = 147 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 18/87 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV +N+I+S N T HAE AI R L Sbjct: 27 VGAVITKHNRIVSVGFNGYPHGVSDSADTDEREIKYLKTLHAEENAILFAKR-----DLE 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLY 99 D++VT PC CAA I I ++Y Sbjct: 82 GCDIWVTHFPCPNCAAKIIQTGISKVY 108 >gi|5726586|gb|AAD48481.1|AF170104_9 unknown [Aliivibrio fischeri] Length = 124 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 18/87 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV +N+I+S N T HAE AI R L Sbjct: 4 VGAVITKHNRIVSVGFNGYPHGVSDSADTDEREIKYLKTLHAEENAILFAKR-----DLE 58 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLY 99 D++VT PC CAA I I ++Y Sbjct: 59 GCDIWVTHFPCPNCAAKIIQTGISKVY 85 >gi|465877|sp|P33968|YLXG_VIBFI RecName: Full=Uncharacterized deaminase in luxG 3'region gi|396216|emb|CAA49769.1| unnamed protein product [Aliivibrio fischeri] gi|119116595|dbj|BAF40863.1| putative deoxycytidylate deaminase [Vibrio fischeri] Length = 147 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 18/87 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV +N+I+S N T HAE AI R L Sbjct: 27 VGAVITKHNRIVSVGFNGYPHGVSDSADTDEREIKYLKTLHAEENAILFAKR-----DLE 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLY 99 D++VT PC CAA I I ++Y Sbjct: 82 GCDIWVTHFPCPNCAAKIIQTGISKVY 108 >gi|299743335|ref|XP_001835696.2| hypothetical protein CC1G_07120 [Coprinopsis cinerea okayama7#130] gi|298405607|gb|EAU86041.2| hypothetical protein CC1G_07120 [Coprinopsis cinerea okayama7#130] Length = 480 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 34/65 (52%) Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + S +L +++T EPC MC+ A+ +R+R ++Y PK GG + T TL + Sbjct: 376 QNGSNYLLTNQTIFLTHEPCIMCSMALLHSRVREVFYLYPMPKTGGCGSLTCLPTLKGVN 435 Query: 124 HSPEI 128 H I Sbjct: 436 HRFTI 440 >gi|215410398|ref|ZP_03419206.1| deaminase [Mycobacterium tuberculosis 94_M4241A] Length = 140 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 25/55 (45%) Query: 46 ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + D TAHAE LAIR C L E L L V PC MC ++ + + Sbjct: 13 QTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSLYYCSPDEVVF 67 >gi|256847006|ref|ZP_05552452.1| ComE operon protein 2 [Lactobacillus coleohominis 101-4-CHN] gi|256715670|gb|EEU30645.1| ComE operon protein 2 [Lactobacillus coleohominis 101-4-CHN] Length = 162 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 51/154 (33%), Gaps = 24/154 (15%) Query: 1 MKK----GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD------- 49 MKK FM A A R + VGA+ V + +II N D Sbjct: 1 MKKRIDWDQYFMVQAGLVASRGTCRR-LSVGAILVRDKRIIGSGYNGAVAGDDHCIDVGC 59 Query: 50 --------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ C LYVT PC C ++ A I+++ Y Sbjct: 60 YMRDGHCVRTIHAEMNALLQ-CAKFGTPT-DGAVLYVTDFPCLQCTKSLLQAGIKQINYL 117 Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 + + + H + I E+ Sbjct: 118 RNYHNDEYAMKLIRLKNVKL--HQIRLDSNILEE 149 >gi|159038151|ref|YP_001537404.1| CMP/dCMP deaminase zinc-binding [Salinispora arenicola CNS-205] gi|157916986|gb|ABV98413.1| CMP/dCMP deaminase zinc-binding [Salinispora arenicola CNS-205] Length = 162 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 22/135 (16%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVG------AVAVLN-NKIISRAGNRNRELKDVTAHA 54 + ++ A+E ++ PVG A+ V ++ +R D HA Sbjct: 6 RTDRQWLLRAIELSR-----GSSPVGTAYSVGAIIVAAAGDQLTEGYSR---DTDAHTHA 57 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPCT-------MCAAAISLARIRRLYYGASNPKG 107 E A+ R+ L LY ++EPCT C I A IRR+ Y P Sbjct: 58 EESAVAKVERLAPHPDLTGATLYSSMEPCTSRKSRPRTCTELILAAGIRRVVYALREPPL 117 Query: 108 GGIENGTQFYTLATC 122 +GT+ + Sbjct: 118 LAECHGTEVLRSSGI 132 >gi|315037464|ref|YP_004031032.1| dCMP deaminase [Lactobacillus amylovorus GRL 1112] gi|312275597|gb|ADQ58237.1| dCMP deaminase [Lactobacillus amylovorus GRL 1112] Length = 159 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 18/111 (16%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV---------- 50 FM AL AQ + + VG+V V +++II N + + DV Sbjct: 9 QYFMMQALVIAQRSTCNRAL-VGSVLVKDHRIIGTGYNGSVSGQPHCDDVGHQMVDDHCV 67 Query: 51 -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H+E+ AI + ++YVT PC C A+ A I+++ Y Sbjct: 68 RTIHSEMNAIIQCAKFGVST--ENTEIYVTHFPCYNCCKALVQAGIKKINY 116 >gi|290959312|ref|YP_003490494.1| reductase [Streptomyces scabiei 87.22] gi|260648838|emb|CBG71952.1| putative reductase [Streptomyces scabiei 87.22] Length = 385 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 43/118 (36%), Gaps = 23/118 (19%) Query: 4 GNVFMSCALEEA------QNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEI 56 ++ A E A + A VGAV V + ++R +R E D HAE Sbjct: 239 DRHWLDLACELAAACPPSRTAFS-----VGAVVVAEDGTELARGHSR--EGGDPVVHAEE 291 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKG 107 A+ + L +Y +LEPC CA + A IRR+ P Sbjct: 292 AAL--AKIDPADPRLASATVYSSLEPCARRASRPAPCARLVLDAGIRRVVTAWREPDT 347 >gi|158428667|pdb|2HVV|A Chain A, Crystal Structure Of Dcmp Deaminase From Streptococcus Mutans gi|158428668|pdb|2HVV|B Chain B, Crystal Structure Of Dcmp Deaminase From Streptococcus Mutans gi|158428669|pdb|2HVW|A Chain A, Crystal Structure Of Dcmp Deaminase From Streptococcus Mutans gi|158428670|pdb|2HVW|B Chain B, Crystal Structure Of Dcmp Deaminase From Streptococcus Mutans gi|158428671|pdb|2HVW|C Chain C, Crystal Structure Of Dcmp Deaminase From Streptococcus Mutans Length = 184 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V NN+II+ N D T HAE+ A+ + Sbjct: 63 VGAVLVKNNRIIATGYNGGVADTDNCDDVGHEMEDGHCIRTVHAEMNALIQCAKEGISAN 122 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++YVT PC C A+ A ++++ Y Sbjct: 123 --NTEIYVTHFPCINCTKALLQAGVKKITY 150 >gi|13542119|ref|NP_111807.1| deoxycytidylate deaminase [Thermoplasma volcanium GSS1] gi|14325550|dbj|BAB60453.1| dCMP deaminase [Thermoplasma volcanium GSS1] Length = 170 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 45/134 (33%), Gaps = 42/134 (31%) Query: 4 GNVFMSCALEEA-------QNAALRNEIPVGAVAVLNNKIISRAGNR------------- 43 FM A A + VGAV V + +++ N Sbjct: 10 DEYFMRMAYLAASRTNCIRRK--------VGAVIVKDKNVLATGYNGPPSGTAHCDVVGC 61 Query: 44 -NRELKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93 +LK + HAE AI + + + +YVT PC +C+ I A Sbjct: 62 IREDLKIPSGERHELCRGLHAEQNAIIQAA--VHGVSIKDSTIYVTTHPCVVCSKMIMNA 119 Query: 94 RIRRLYY--GASNP 105 +I+ + Y G + Sbjct: 120 QIKEIVYAEGYPDE 133 >gi|313212488|emb|CBY36459.1| unnamed protein product [Oikopleura dioica] Length = 123 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 1/89 (1%) Query: 48 KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 K+ HA + + + + IL +++Y+ EPC MC+ A+S +RI+RL+Y Sbjct: 28 KNPLGHAALNLVAKAA-GMGEYILTGLEVYMYREPCLMCSMALSHSRIKRLFYLKKCGTD 86 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQR 136 G +TL +H +++ G E R Sbjct: 87 GSCGTRESIHTLPALNHRFQVFYGGFEDR 115 >gi|190348437|gb|EDK40888.2| hypothetical protein PGUG_04986 [Meyerozyma guilliermondii ATCC 6260] Length = 338 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 40/125 (32%), Gaps = 30/125 (24%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50 + FM A + A A N + VG V V N++I+ N E Sbjct: 185 DSYFMRLA-DLA--ALRSNCMKRRVGCVVVRGNRVIATGYNGTPRNLPNCNEGGCPRCNM 241 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEV--DLYVTLEPCTMCAAAISLARIR 96 HAE A+ R P+ LY PC C+ I + I+ Sbjct: 242 GHGSGAELSTCLCLHAEENALLEAGRDRISRSHPDERGVLYCNTCPCLTCSIKIVQSGIK 301 Query: 97 RLYYG 101 + Y Sbjct: 302 EVVYA 306 >gi|171683047|ref|XP_001906466.1| hypothetical protein [Podospora anserina S mat+] gi|170941483|emb|CAP67134.1| unnamed protein product [Podospora anserina S mat+] Length = 243 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 48/142 (33%), Gaps = 26/142 (18%) Query: 26 VGAVAV------LNNKIISRAGNRNRELKDVTAHAEILAIRM--------GCRILSQEIL 71 G V V +I N+N + T H E+ AI + E L Sbjct: 74 FGTVIVNHTLDNPQGTLICTGANQNSLAGNPTLHGEMAAINNCSSIFVSSAYNMTPAESL 133 Query: 72 P---EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG-TQFYTLATC----- 122 ++ LY E C MCAAA+ A R YG S + + G + Sbjct: 134 AAFKDLSLYTNAESCPMCAAAVRWAGFREYVYGVSIKELIELGWGQLDIGSEEVIGSGVG 193 Query: 123 --HHSPEIY-PGISEQRSRQII 141 PE+ G+ + S+ + Sbjct: 194 MRDQDPEVVLGGVGSEESKVLF 215 >gi|254459248|ref|ZP_05072670.1| cytidine/deoxycytidylate deaminase family protein [Campylobacterales bacterium GD 1] gi|207084141|gb|EDZ61431.1| cytidine/deoxycytidylate deaminase family protein [Campylobacterales bacterium GD 1] Length = 152 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 7/68 (10%) Query: 2 KKGNVFMSCALE-------EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA 54 K + A++ +A + GAV + KI+ N + D + H Sbjct: 82 KTHRKHIRRAIKLGAHNPMQALKGHAPDGGFFGAVIYKDGKILGEGWNTVLKEGDPSRHG 141 Query: 55 EILAIRMG 62 E+ AIR Sbjct: 142 EMNAIRQA 149 >gi|312195561|ref|YP_004015622.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c] gi|311226897|gb|ADP79752.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c] Length = 161 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 51/148 (34%), Gaps = 27/148 (18%) Query: 4 GNVFMSCALEEA------QNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAE 55 ++ A+E A + A VGAV V + +++ +R D HAE Sbjct: 16 DGHWLEYAVELALRCPPSRTAFS-----VGAVIVGPDGATVLAEGWSR---AGDPRDHAE 67 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPCT-------MCAAAISLARIRRLYYGASNPKGG 108 A+R L LY +LEPC+ C A I R+ + P Sbjct: 68 EAALR--GFAPGDPRLAGATLYSSLEPCSARASRPRTCTELTLAAGIGRVVFAWREPALF 125 Query: 109 GIENGTQFYTLA--TCHHSPEIYPGISE 134 G + A T P++ G+ Sbjct: 126 VDCQGAELLAAAGVTVVERPDLAAGVRA 153 >gi|148269654|ref|YP_001244114.1| CMP/dCMP deaminase, zinc-binding [Thermotoga petrophila RKU-1] gi|170288329|ref|YP_001738567.1| CMP/dCMP deaminase zinc-binding [Thermotoga sp. RQ2] gi|281411636|ref|YP_003345715.1| CMP/dCMP deaminase zinc-binding protein [Thermotoga naphthophila RKU-10] gi|147735198|gb|ABQ46538.1| CMP/dCMP deaminase, zinc-binding [Thermotoga petrophila RKU-1] gi|170175832|gb|ACB08884.1| CMP/dCMP deaminase zinc-binding [Thermotoga sp. RQ2] gi|281372739|gb|ADA66301.1| CMP/dCMP deaminase zinc-binding protein [Thermotoga naphthophila RKU-10] Length = 169 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 26/120 (21%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR-------NRELKDVTA---- 52 + FM A ++ + VGAV V +++I++ N+ E+ + Sbjct: 25 DSYFMRIARMVSERSTCV-HRKVGAVIVKDHRILATGYNQPPSKFPHCNEIGCIRDDLEI 83 Query: 53 ------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE A+ + + +YVT +PC++CA I A I+R+ Y Sbjct: 84 NSGEHQEICYALHAEQNALMQAAKFGIA--VNGATIYVTHKPCSICARLIVNAGIKRVVY 141 >gi|295395079|ref|ZP_06805288.1| riboflavin biosynthesis protein RibD [Brevibacterium mcbrellneri ATCC 49030] gi|294972027|gb|EFG47893.1| riboflavin biosynthesis protein RibD [Brevibacterium mcbrellneri ATCC 49030] Length = 336 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 38/109 (34%), Gaps = 14/109 (12%) Query: 9 SCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 AL A VGA + ++ + ++ T HAE AIR + Sbjct: 9 RAALGAATRGVRGANPLVGAAVLWDDGTFTTGYHQ----GAGTPHAEPDAIRNASPRSTT 64 Query: 69 EILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 L VTLEPC+ C AI A I R+ + +P Sbjct: 65 ----GATLVVTLEPCSHTGRTGPCTQAIIDAGITRVVIASRDPNPQASG 109 >gi|217076231|ref|YP_002333947.1| deoxycytidylate deaminase [Thermosipho africanus TCF52B] gi|217036084|gb|ACJ74606.1| deoxycytidylate deaminase [Thermosipho africanus TCF52B] Length = 170 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 31/130 (23%) Query: 26 VGAVAVLNNKIISRAGNRN-------------RELKDVTA----------HAEILAIRMG 62 VGAV V + +I++ N+ R+ ++ + HAE A+ Sbjct: 44 VGAVIVKDKRILATGYNQPPSGFPHCDDIGCIRDDLNIKSGENQEVCYALHAEQNALMQA 103 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 + +YVT +PC++CA I A I+++ Y P + T F T Sbjct: 104 AKFGISTD--GATIYVTHKPCSVCARLIINAGIKKVVYLNDYPD-----SLTDFL-FKTS 155 Query: 123 HHSPEIYPGI 132 S E + G+ Sbjct: 156 KISVEKHGGV 165 >gi|239623208|ref|ZP_04666239.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239522174|gb|EEQ62040.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 164 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 33/126 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + FM AL + + P VGA V +NKI+S N Sbjct: 9 ITWDEYFMGVALLSGRRSKD----PSTQVGACIVSQDNKILSMGYNGFPKGCSDDEFPWG 64 Query: 43 RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 + ++ +D + H+E+ AI L LYVTL PC CA AI A I Sbjct: 65 KEKQEEDPYNSKYFYSTHSELNAILN----YRGGSLEGSKLYVTLFPCNECAKAIIQAGI 120 Query: 96 RRLYYG 101 + + YG Sbjct: 121 KTIIYG 126 >gi|325955922|ref|YP_004286532.1| dCMP deaminase [Lactobacillus acidophilus 30SC] gi|325332487|gb|ADZ06395.1| dCMP deaminase [Lactobacillus acidophilus 30SC] gi|327182757|gb|AEA31204.1| dCMP deaminase [Lactobacillus amylovorus GRL 1118] Length = 159 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 18/111 (16%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV---------- 50 FM AL AQ + + VG+V V +++II N + + DV Sbjct: 9 QYFMMQALVIAQRSTCNRAL-VGSVLVKDHRIIGTGYNGSVSGQPHCDDVGHQMVDGHCV 67 Query: 51 -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H+E+ AI + ++YVT PC C A+ A I+++ Y Sbjct: 68 RTIHSEMNAIIQCAKFGVST--ENTEIYVTHFPCYNCCKALVQAGIKKINY 116 >gi|325954402|ref|YP_004238062.1| CMP/dCMP deaminase zinc-binding protein [Weeksella virosa DSM 16922] gi|323437020|gb|ADX67484.1| CMP/dCMP deaminase zinc-binding protein [Weeksella virosa DSM 16922] Length = 143 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 34/147 (23%), Positives = 52/147 (35%), Gaps = 24/147 (16%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV--- 50 +K ++ A E A+ + + VGA+ V + IIS N E ++ Sbjct: 7 LKYDKAYLRIAREWAKLSYCERKK-VGAIIVKDRAIISDGFNGSPSGFDNRCEDENGETK 65 Query: 51 --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 HAE AI LY+TL PC C+ I + I R+ Y + K Sbjct: 66 WYILHAEANAILKVAASTQS--CKGATLYLTLSPCKDCSKLIHQSGINRVVY-MQDYK-- 120 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQ 135 L H + + I E+ Sbjct: 121 ------DVEGLDFLHKAGVVIEQIPEE 141 >gi|315222930|ref|ZP_07864809.1| putative ComE operon protein 2 [Streptococcus anginosus F0211] gi|315187880|gb|EFU21616.1| putative ComE operon protein 2 [Streptococcus anginosus F0211] Length = 164 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 42/112 (37%), Gaps = 19/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------DV-- 50 F + AL A + + VGAV V +NK+IS N + D Sbjct: 18 DEYFAAQALLIANRSTCKR-ASVGAVIVKDNKVISTGYNGSVSGTEHCIDHECLIVDGHC 76 Query: 51 --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI G + +YVT PC C + +R+ Y Sbjct: 77 VRTLHAEVNAILQGAERGIPK---GFTVYVTHFPCLNCTKQLLQVGCKRVVY 125 >gi|269960107|ref|ZP_06174484.1| deoxycytidylate deaminase, putative [Vibrio harveyi 1DA3] gi|269835406|gb|EEZ89488.1| deoxycytidylate deaminase, putative [Vibrio harveyi 1DA3] Length = 152 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV NN+I+S N T HAE AI + S+ L Sbjct: 27 VGAVITKNNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 D++VT PC CAA I I R+ Sbjct: 82 GCDIWVTHFPCPNCAAKIIQTGIARV 107 >gi|156976611|ref|YP_001447517.1| deoxycytidylate deaminase [Vibrio harveyi ATCC BAA-1116] gi|156528205|gb|ABU73290.1| hypothetical protein VIBHAR_05385 [Vibrio harveyi ATCC BAA-1116] Length = 168 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV NN+I+S N T HAE AI + S+ L Sbjct: 43 VGAVITKNNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 97 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 D++VT PC CAA I I R+ Sbjct: 98 GCDIWVTHFPCPNCAAKIIQTGIARV 123 >gi|153832876|ref|ZP_01985543.1| deoxycytidylate deaminase [Vibrio harveyi HY01] gi|148870799|gb|EDL69698.1| deoxycytidylate deaminase [Vibrio harveyi HY01] Length = 152 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV NN+I+S N T HAE AI + S+ L Sbjct: 27 VGAVITKNNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 D++VT PC CAA I I R+ Sbjct: 82 GCDIWVTHFPCPNCAAKIIQTGIARV 107 >gi|50914883|ref|YP_060855.1| ComE operon protein 2 [Streptococcus pyogenes MGAS10394] gi|94989182|ref|YP_597283.1| comE operon protein 2 [Streptococcus pyogenes MGAS9429] gi|94993070|ref|YP_601169.1| ComE operon protein 2 [Streptococcus pyogenes MGAS2096] gi|94995003|ref|YP_603101.1| ComE operon protein 2 [Streptococcus pyogenes MGAS10750] gi|50903957|gb|AAT87672.1| ComE operon protein 2 [Streptococcus pyogenes MGAS10394] gi|94542690|gb|ABF32739.1| comE operon protein 2 [Streptococcus pyogenes MGAS9429] gi|94546578|gb|ABF36625.1| ComE operon protein 2 [Streptococcus pyogenes MGAS2096] gi|94548511|gb|ABF38557.1| ComE operon protein 2 [Streptococcus pyogenes MGAS10750] Length = 168 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V +N+II+ N D T HAE+ A+ + Sbjct: 44 VGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEDGHCIRTVHAEMNALIQCAKEGISTD 103 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++YVT PC C A+ A I ++ Y Sbjct: 104 --GTEIYVTHFPCINCTKALLQAGITKITY 131 >gi|146414121|ref|XP_001483031.1| hypothetical protein PGUG_04986 [Meyerozyma guilliermondii ATCC 6260] Length = 338 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 40/125 (32%), Gaps = 30/125 (24%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50 + FM A + A A N + VG V V N++I+ N E Sbjct: 185 DSYFMRLA-DLA--ALRSNCMKRRVGCVVVRGNRVIATGYNGTPRNLPNCNEGGCPRCNM 241 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEV--DLYVTLEPCTMCAAAISLARIR 96 HAE A+ R P+ LY PC C+ I + I+ Sbjct: 242 GHGSGAELSTCLCLHAEENALLEAGRDRISRSHPDERGVLYCNTCPCLTCSIKIVQSGIK 301 Query: 97 RLYYG 101 + Y Sbjct: 302 EVVYA 306 >gi|115938354|ref|XP_001201090.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 146 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 27/128 (21%) Query: 26 VGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS---------------- 67 +GA+ V ++ + + ++ HA + I + Sbjct: 3 IGALIVDPKSDTTLGMTSSVPGIGENSLQHAVMKCIDLVAHSQGGGAWSICPESCYESVN 62 Query: 68 --------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + DLY+T EPC MCA A+ +RIRR++Y S+P G + + + + Sbjct: 63 GECSTDETPYLCTGFDLYITQEPCVMCAMALVHSRIRRVFYIDSHPD-GALGSRYKLHAE 121 Query: 120 ATCHHSPE 127 ++ +H + Sbjct: 122 SSLNHRYQ 129 >gi|269838886|ref|YP_001949988.2| deoxycytidylate deaminase domain like protein [Ralstonia phage RSL1] gi|239793682|dbj|BAG41558.2| deoxycytidylate deaminase domain like protein [Ralstonia phage RSL1] Length = 145 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 42/125 (33%), Gaps = 28/125 (22%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-----------RNRELKD 49 M N +MS A A + VG V ++I+S A N + KD Sbjct: 1 MDLDNFYMSIAHHAADQSHAIRRK-VGCVVAKGDRILSYAWNGMPAGFHNDCEHSVLTKD 59 Query: 50 V--------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 HAE+ AI LY+TL PC CA I + I Sbjct: 60 PETGILQFQLLTKPGVTHAEVNAIGKLAAAGIS--CAGATLYLTLSPCVPCANLIQRSGI 117 Query: 96 RRLYY 100 R+ Y Sbjct: 118 ERVVY 122 >gi|24380210|ref|NP_722165.1| putative deoxycytidylate deaminase [Streptococcus mutans UA159] gi|24378216|gb|AAN59471.1|AE015011_10 putative deoxycytidylate deaminase [Streptococcus mutans UA159] Length = 150 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V NN+II+ N D T HAE+ A+ + Sbjct: 29 VGAVLVKNNRIIATGYNGGVADTDNCDDVGHEMEDGHCIRTVHAEMNALIQCAKEGISAN 88 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++YVT PC C A+ A ++++ Y Sbjct: 89 --NTEIYVTHFPCINCTKALLQAGVKKITY 116 >gi|332025338|gb|EGI65506.1| Deoxycytidylate deaminase [Acromyrmex echinatior] Length = 182 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 43/128 (33%), Gaps = 41/128 (32%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKDVTA---- 52 + FM+ A A+ + P VGA V N+K I+ N T Sbjct: 9 IDWDEYFMAIAFLSAKRSKD----PCTQVGACIVNNDKRIVGIGYN-----GMPTGCSDD 59 Query: 53 --------------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 HAE+ A+ + + + +YV L PC CA I Sbjct: 60 EFPWKRGLHTSLESKYLYVCHAEVNAVLN----KNSSNVKDCTIYVALFPCNQCAKVIIQ 115 Query: 93 ARIRRLYY 100 + I+ + Y Sbjct: 116 SGIKTVIY 123 >gi|237785569|ref|YP_002906274.1| diaminohydroxyphosphoribosylaminopyrimidinedeaminase [Corynebacterium kroppenstedtii DSM 44385] gi|237758481|gb|ACR17731.1| diaminohydroxyphosphoribosylaminopyrimidinedeaminase [Corynebacterium kroppenstedtii DSM 44385] Length = 357 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 43/138 (31%), Gaps = 23/138 (16%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A E A PVGAV + + +I+ + + HAE++A+R Sbjct: 24 MDRAAELGWEAKGTTSPNPPVGAVIIDADGRIVGQGHTQPAGG----PHAEVMAVRDAGD 79 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + VTLEPC C + A I + Y +P G + Sbjct: 80 ATAGAT-----AIVTLEPCAHTGRTGPCTDVLLSAGISTVVYAVPDPNPIAHG-GHEVLA 133 Query: 119 LATCHHSPEIYPGISEQR 136 + G Sbjct: 134 EKGL----TVIGGFHADE 147 >gi|291237544|ref|XP_002738694.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii] Length = 203 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 55/152 (36%), Gaps = 34/152 (22%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNR------------NRELK 48 + FM+ A AQ + P VGA V K I+ N R+ Sbjct: 50 DYFMAVAFLSAQRSKD----PSSQVGACIVNEEKKIVGIGYNGMPIGCSDDVLPWRRKAD 105 Query: 49 DVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 D HAE+ AI + + +YV L PC CA + ++I+ + Y Sbjct: 106 DELDTKYPYVCHAELNAILN----KNSSDVKGCTMYVALFPCNECAKLVIQSKIKEVVY- 160 Query: 102 ASNP--KGGGIENGTQFYTLATCHHSPEIYPG 131 SN G+ + LA + E++ G Sbjct: 161 VSNKYHDTAGVTASRKMLDLAGVKYRYEVHSG 192 >gi|312113516|ref|YP_004011112.1| riboflavin biosynthesis protein RibD [Rhodomicrobium vannielii ATCC 17100] gi|311218645|gb|ADP70013.1| riboflavin biosynthesis protein RibD [Rhodomicrobium vannielii ATCC 17100] Length = 398 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 46/133 (34%), Gaps = 23/133 (17%) Query: 9 SCALEEAQ--NAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 AL AQ A VGAV +II+ A + HAE+LA+R Sbjct: 35 RRALFVAQTNIGATSPNPSVGAVVADARTGEIIASAA----TARGGRPHAEVLALREAG- 89 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + + TLEPC CA +I A I L YG+ +P G + Sbjct: 90 ----DRAKGALIITTLEPCSHFGATPPCAHSIVNAGISHLIYGSLDPDTRVGGRGLTYVA 145 Query: 119 LATCHHSPEIYPG 131 H G Sbjct: 146 Q----HGVRATRG 154 >gi|257790791|ref|YP_003181397.1| CMP/dCMP deaminase zinc-binding [Eggerthella lenta DSM 2243] gi|317488497|ref|ZP_07947048.1| cytidine and deoxycytidylate deaminase zinc-binding region [Eggerthella sp. 1_3_56FAA] gi|325831992|ref|ZP_08165089.1| ComE operon protein 2 [Eggerthella sp. HGA1] gi|257474688|gb|ACV55008.1| CMP/dCMP deaminase zinc-binding [Eggerthella lenta DSM 2243] gi|316912429|gb|EFV33987.1| cytidine and deoxycytidylate deaminase zinc-binding region [Eggerthella sp. 1_3_56FAA] gi|325486313|gb|EGC88765.1| ComE operon protein 2 [Eggerthella sp. HGA1] Length = 152 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 44/126 (34%), Gaps = 38/126 (30%) Query: 4 GNVFMSCALEEA------QNAALRNEIPVGAVAVLNNKIISRAGN--------------R 43 FM+ A E A + A VGAV V + +I++ N Sbjct: 11 DEYFMTLANEVATRTTCMRRA-------VGAVIVKDRRILATGYNGVPTGMRHCAETGCL 63 Query: 44 NRELKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 ++L + HAE AI R + +YV +PC +CA + A Sbjct: 64 RQQLGVPSGQRHEICRGLHAEQNAIIQAARYGIN--ITGASIYVNTQPCIVCAKMLINAG 121 Query: 95 IRRLYY 100 I + Y Sbjct: 122 IDEIVY 127 >gi|325690868|gb|EGD32869.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis SK115] Length = 155 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRE------LKDV-- 50 F + AL A + A VGAV V +NK+IS N + D Sbjct: 9 DQYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHDCLV 62 Query: 51 -------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI G + YVT PC C + +R+ Y Sbjct: 63 IDGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116 >gi|332882408|ref|ZP_08450036.1| ComE operon protein 2 family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679792|gb|EGJ52761.1| ComE operon protein 2 family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 149 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 46/115 (40%), Gaps = 18/115 (15%) Query: 2 KKGNV---FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDV 50 KK + ++ A A+N+ VGA+ V + IIS N + + Sbjct: 7 KKHELDLRYLRMARIWAENSYCERRK-VGALIVKDKMIISDGYNGTPAGFENVCEDENHL 65 Query: 51 T----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE AI R + LYVT PC C+ I + I+R++Y Sbjct: 66 TKPYVLHAEANAITKIARSGNNS--EGATLYVTDAPCIECSKLIIQSGIKRVFYA 118 >gi|78222831|ref|YP_384578.1| CMP/dCMP deaminase, zinc-binding protein [Geobacter metallireducens GS-15] gi|78194086|gb|ABB31853.1| CMP/dCMP deaminase, zinc-binding protein [Geobacter metallireducens GS-15] Length = 154 Score = 69.6 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 43/127 (33%), Gaps = 28/127 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 FM A+ + VGAV V + I++ N +L Sbjct: 7 DEYFMEITHLVAKRSTCLR-RQVGAVIVKDKNILATGYNGAPSGVAHCLEVGCLRAKLGI 65 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE AI + + LY T PC +C+ + A IRR+ Y Sbjct: 66 PSGERHELCRGLHAEQNAIIQAAKHGIN--IDGGTLYCTTMPCIICSKMLINAGIRRVVY 123 Query: 101 --GASNP 105 G S+ Sbjct: 124 EEGYSDE 130 >gi|160947203|ref|ZP_02094370.1| hypothetical protein PEPMIC_01136 [Parvimonas micra ATCC 33270] gi|158446337|gb|EDP23332.1| hypothetical protein PEPMIC_01136 [Parvimonas micra ATCC 33270] Length = 141 Score = 69.6 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 45/118 (38%), Gaps = 21/118 (17%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNR-----------E 46 M+K FM A A VG V V +N+IIS N + Sbjct: 1 MRKPWEEYFMDLAKMVATRGTCDRAY-VGCVLVNKDNRIISTGYNGSISGNPQCDEIGHT 59 Query: 47 LKD----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++D T HAE A+ R + + YVT PC C A+ A I ++YY Sbjct: 60 MRDGHCIATIHAEQNALLYCAREGIK--VKGCTCYVTHFPCLNCTKALIQAGISKIYY 115 >gi|308189593|ref|YP_003922524.1| dCMP deaminase [Mycoplasma fermentans JER] gi|319776745|ref|YP_004136396.1| deoxycytidylate deaminase protein [Mycoplasma fermentans M64] gi|238810149|dbj|BAH69939.1| hypothetical protein [Mycoplasma fermentans PG18] gi|307624335|gb|ADN68640.1| dCMP deaminase [Mycoplasma fermentans JER] gi|318037820|gb|ADV34019.1| Deoxycytidylate deaminase protein [Mycoplasma fermentans M64] Length = 163 Score = 69.6 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 46/125 (36%), Gaps = 33/125 (26%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRN-----------RELK 48 FM+ A A + P VGA V NK II+ N RE + Sbjct: 9 DGYFMALAKVSALRSKD----PSTKVGACVVNENKRIIALGYNGMPKGIDDEFPWDREGE 64 Query: 49 DV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE+ AI + + L ++ +L PC+ CA I+ + I + Y Sbjct: 65 SPKETKYAYVVHAEMNAI-----LNTNNNLQGCTIFTSLYPCSSCAKTIAQSGISEVVY- 118 Query: 102 ASNPK 106 + K Sbjct: 119 -EDDK 122 >gi|218752491|ref|ZP_03531287.1| deaminase [Mycobacterium tuberculosis GM 1503] gi|254549800|ref|ZP_05140247.1| deaminase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 210 Score = 69.6 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 25/55 (45%) Query: 46 ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + D TAHAE LAIR C L E L L V PC MC ++ + + Sbjct: 83 QTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSLYYCSPDEVVF 137 >gi|303228977|ref|ZP_07315787.1| cytidine and deoxycytidylate deaminase zinc-binding region [Veillonella atypica ACS-134-V-Col7a] gi|302516391|gb|EFL58323.1| cytidine and deoxycytidylate deaminase zinc-binding region [Veillonella atypica ACS-134-V-Col7a] Length = 159 Score = 69.6 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 29/121 (23%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN---RNRELKDVTA- 52 + FM A+ AQ + P VGA V +NKI+S N N D T Sbjct: 8 ISWDEYFMGVAILAAQRSKD----PNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWE 63 Query: 53 -------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 H+E+ AI L +YVTL PC CA AI + I+ + Sbjct: 64 RDTADDNKYFYTVHSELNAILN----YRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVL 119 Query: 100 Y 100 Y Sbjct: 120 Y 120 >gi|313844171|ref|YP_004061834.1| hypothetical protein OlV1_202 [Ostreococcus lucimarinus virus OlV1] gi|312599556|gb|ADQ91578.1| hypothetical protein OlV1_202 [Ostreococcus lucimarinus virus OlV1] Length = 136 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 14/111 (12%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR-----------NRELKD 49 + FM A E A + + + VG V V NN++IS N + Sbjct: 5 ISWNEYFMKTA-ELASVRSPCDRLNVGCVLVKNNRLISMGYNGFLGGSNHTSIVRDGHEQ 63 Query: 50 VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAEI A+ + + + Y+T PC C A++ + +++++Y Sbjct: 64 ATIHAEINAVTDAAKRGVS--IDGTEAYITHYPCLNCYKALASSGVKKIHY 112 >gi|215444965|ref|ZP_03431717.1| deaminase [Mycobacterium tuberculosis T85] Length = 215 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 25/55 (45%) Query: 46 ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + D TAHAE LAIR C L E L L V PC MC ++ + + Sbjct: 88 QTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSLYYCSPDEVVF 142 >gi|52081108|ref|YP_079899.1| hypothetical protein BL02086 [Bacillus licheniformis ATCC 14580] gi|52786486|ref|YP_092315.1| hypothetical protein BLi02751 [Bacillus licheniformis ATCC 14580] gi|319644935|ref|ZP_07999168.1| late competence protein ComEB [Bacillus sp. BT1B_CT2] gi|18266365|gb|AAL67525.1|AF459916_2 late competence protein ComEB [Bacillus licheniformis] gi|52004319|gb|AAU24261.1| ComEB [Bacillus licheniformis ATCC 14580] gi|52348988|gb|AAU41622.1| ComEB [Bacillus licheniformis ATCC 14580] gi|317392744|gb|EFV73538.1| late competence protein ComEB [Bacillus sp. BT1B_CT2] Length = 189 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 + FM+ + A + + VGA V + +II+ N + Sbjct: 4 ISWDQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGVHCADEGCYMVD 62 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ AI + ++YVT PC C +I A I+ +YY Sbjct: 63 GHCIRTIHAEMNAILQCAKFGVPT--EGAEIYVTHFPCIQCCKSIIQAGIKTIYYA 116 >gi|328463918|gb|EGF35436.1| hypothetical protein AAULH_01270 [Lactobacillus helveticus MTCC 5463] Length = 358 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 18/108 (16%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------DV--- 50 FM AL AQ + + VG+V V +N+II N + + D Sbjct: 9 QYFMMQALVIAQRSTCNRAL-VGSVLVKDNRIIGTGYNGSVSGQPHCDEVGHQMVDGHCV 67 Query: 51 -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 T H+E+ AI + + ++YVT PC C ++ A +R+ Sbjct: 68 RTIHSEMNAIIQCAKFGVSTD--DTEIYVTHFPCYNCCKSLFQAGVRK 113 >gi|28378749|ref|NP_785641.1| dCMP deaminase [Lactobacillus plantarum WCFS1] gi|254556952|ref|YP_003063369.1| dCMP deaminase [Lactobacillus plantarum JDM1] gi|300768267|ref|ZP_07078172.1| competence protein ComEB [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180941|ref|YP_003925069.1| dCMP deaminase [Lactobacillus plantarum subsp. plantarum ST-III] gi|28271586|emb|CAD64491.1| dCMP deaminase [Lactobacillus plantarum WCFS1] gi|254045879|gb|ACT62672.1| dCMP deaminase [Lactobacillus plantarum JDM1] gi|300494331|gb|EFK29494.1| competence protein ComEB [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046432|gb|ADN98975.1| dCMP deaminase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 162 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 20/113 (17%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV------------- 50 FM A+ A + + VGA V + +II+ N + DV Sbjct: 10 DQYFMMQAVLLASRSTCER-LSVGATIVRDKRIIAGGYNGSVS-GDVHCIDEGCYLVDGH 67 Query: 51 ---TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI + + ++YVT PC C + A I++++Y Sbjct: 68 CVRTIHAEMNAILQCAKFGAATD--GAEIYVTDFPCLQCTKMLLQAGIQKIHY 118 >gi|78045157|ref|YP_361349.1| putative comE operon protein 2 [Carboxydothermus hydrogenoformans Z-2901] gi|77997272|gb|ABB16171.1| putative comE operon protein 2 [Carboxydothermus hydrogenoformans Z-2901] Length = 170 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGAV V +N++++ N + + HAE AI Sbjct: 49 VGAVLVKDNRVLATGYNGAPKGVPHCEEVGCLREQEHVPSGQRHELCRGLHAEQNAIIQA 108 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 +Y+T +PC++CA + A + R+ Y Sbjct: 109 AVYGVST--SGSTIYITHQPCSLCAKMLINAGVERVVY 144 >gi|323464316|gb|ADX76469.1| ComE operon protein 2, putative [Staphylococcus pseudintermedius ED99] Length = 153 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 ++ FM+ + A + + VGA +N+II+ N + Sbjct: 4 IQWHEYFMAQSHLLALRSTCTR-LSVGATITKDNRIIAGGYNGSVSGEVHCIDEGCLMED 62 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ AI + +YVT PC C +I A I+ +YY Sbjct: 63 GHCIRTIHAEMNAILQCSKQGVST--ENATIYVTHFPCLNCTKSIIQAGIKTIYYA 116 >gi|254565397|ref|XP_002489809.1| Deoxycytidine monophosphate (dCMP) deaminase required for dCTP and dTTP synthesis [Pichia pastoris GS115] gi|238029605|emb|CAY67528.1| Deoxycytidine monophosphate (dCMP) deaminase required for dCTP and dTTP synthesis [Pichia pastoris GS115] gi|328350225|emb|CCA36625.1| dCMP deaminase [Pichia pastoris CBS 7435] Length = 308 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 39/122 (31%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRN----------------- 44 FM A + A A N + VG V V +N+IIS N Sbjct: 161 DAYFMRLA-DLA--ALRSNCMKRRVGCVVVRDNRIISTGYNGTPRNMPNCNQGGCARCNS 217 Query: 45 -RELKDVTA-----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + + HAE A+ R LY PC C+ I + I+ + Sbjct: 218 GNSSGNGLSTCLCLHAEENALLEAGRDRIS---TNSILYCNTCPCLTCSIKIIQSGIQEV 274 Query: 99 YY 100 Y Sbjct: 275 VY 276 >gi|319892646|ref|YP_004149521.1| dCMP deaminase; Late competence protein ComEB [Staphylococcus pseudintermedius HKU10-03] gi|317162342|gb|ADV05885.1| dCMP deaminase; Late competence protein ComEB [Staphylococcus pseudintermedius HKU10-03] Length = 153 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46 ++ FM+ + A + + VGA +N+II+ N + Sbjct: 4 IQWHEYFMAQSHLLALRSTCTR-LSVGATITKDNRIIAGGYNGSVSGEVHCIDEGCLMEG 62 Query: 47 -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ AI + +YVT PC C +I A I+ +YY Sbjct: 63 GHCIRTIHAEMNAILQCSKQGVST--ENATIYVTHFPCLNCTKSIIQAGIKTIYYA 116 >gi|94991124|ref|YP_599224.1| ComE operon protein 2 [Streptococcus pyogenes MGAS10270] gi|94544632|gb|ABF34680.1| ComE operon protein 2 [Streptococcus pyogenes MGAS10270] Length = 170 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V +N+II+ N D T HAE+ A+ + Sbjct: 44 VGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEDGHCIRTVHAEMNALIQCAKEGISTD 103 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++YVT PC C A+ A I ++ Y Sbjct: 104 --GTEIYVTHFPCINCTKALLQAGITKITY 131 >gi|34541467|ref|NP_905946.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas gingivalis W83] gi|188995653|ref|YP_001929905.1| putative deoxycytidylate deaminase [Porphyromonas gingivalis ATCC 33277] gi|34397784|gb|AAQ66845.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas gingivalis W83] gi|188595333|dbj|BAG34308.1| putative deoxycytidylate deaminase [Porphyromonas gingivalis ATCC 33277] Length = 151 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 15/112 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT- 51 ++ ++ A A+N+ VGA+ V IIS N + +VT Sbjct: 13 LELDKRYLRMARIWAENSYCERRK-VGALIVKEQMIISDGYNGTPAGFENICEDENNVTK 71 Query: 52 ---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI + +Y+T PC CA I ++I+R+ Y Sbjct: 72 PYVLHAEANAITKVAGSTNNS--SGATIYITAAPCIECAKLIIQSKIKRVVY 121 >gi|302307964|ref|NP_984770.2| AEL091Cp [Ashbya gossypii ATCC 10895] gi|299789245|gb|AAS52594.2| AEL091Cp [Ashbya gossypii ATCC 10895] Length = 609 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 59/150 (39%), Gaps = 16/150 (10%) Query: 1 MKKGNVFMSCALEEAQNA-ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +++ FM A+E+A+ + VGAV V +I++ +R E HAE A+ Sbjct: 459 LEQHGDFMRLAIEQAKKCPPAKTSFSVGAVLVNGTEILATGYSRELEGN---THAEQCAL 515 Query: 60 RMGCRILSQEILP-EVDLYVTLEPCT-------MCAAAIS--LARIRRLYYGASNPKGGG 109 + + +P +Y T+EPC+ C I I ++ G P Sbjct: 516 QKYFEQHKTDKVPIGTVIYTTMEPCSLRLSGNKPCVERIICQQGNITAVFVGVLEPDN-F 574 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 ++N T L + PG ++ + Sbjct: 575 VKNNTSRALLEQHGIDYILVPGF-QEECTE 603 >gi|221106915|ref|XP_002154094.1| PREDICTED: similar to dCMP deaminase [Hydra magnipapillata] Length = 203 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 53/150 (35%), Gaps = 35/150 (23%) Query: 5 NVFMSCALEEAQNAALRNEIPV---GAVAVLN-NKIISRAGNRN---------------- 44 + FM+ A AQ + PV GA V N NKI+ N Sbjct: 27 DYFMAIAFLSAQRSKD----PVTQVGACIVNNENKIVGIGYNGMPIGCSDEVLPWSRIGE 82 Query: 45 --RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E K HAE+ A+ + + + +Y TL PC CA I +RI+ + Y Sbjct: 83 SFMETKYAYVCHAELNAVLN----KNSADVQDCIIYTTLFPCNECAKIILQSRIKEIVYY 138 Query: 102 A----SNPKGGGIENGTQFYTLATCHHSPE 127 + P+ E + H P+ Sbjct: 139 SNKYKDRPETQAAEKMFDLAGIKHRQHQPK 168 >gi|290579815|ref|YP_003484207.1| putative deoxycytidylate deaminase [Streptococcus mutans NN2025] gi|254996714|dbj|BAH87315.1| putative deoxycytidylate deaminase [Streptococcus mutans NN2025] Length = 150 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V NN+II+ N D T HAE+ A+ + Sbjct: 29 VGAVLVKNNRIIATGYNGGVADTDNCDDVGHEMEDGHCIRTVHAEMNALIQCAKEGISAN 88 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++YVT PC C A+ A ++++ Y Sbjct: 89 --NTEIYVTHFPCINCTKALLQAGVKKITY 116 >gi|51891218|ref|YP_073909.1| dCMP deaminase [Symbiobacterium thermophilum IAM 14863] gi|51854907|dbj|BAD39065.1| dCMP deaminase [Symbiobacterium thermophilum IAM 14863] Length = 144 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 39/112 (34%), Gaps = 18/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 FM A A+ + VG V V + +I++ N + Sbjct: 7 DEYFMELAQVVAKRSTCNRRK-VGTVLVRDKRILTTGYNGSPSGLPHCTDVGCLVVDGHC 65 Query: 50 VTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 V A HAE AI L L YVT PC CA + A I R+ Y Sbjct: 66 VRAIHAEQNAIIQAA--LHGITLKGATCYVTSSPCVHCAKMLIAAGIERIVY 115 >gi|15607968|ref|NP_215343.1| deaminase [Mycobacterium tuberculosis H37Rv] gi|31792016|ref|NP_854509.1| deaminase [Mycobacterium bovis AF2122/97] gi|121636752|ref|YP_976975.1| putative deaminase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660606|ref|YP_001282129.1| putative deaminase [Mycobacterium tuberculosis H37Ra] gi|148822035|ref|YP_001286788.1| deaminase [Mycobacterium tuberculosis F11] gi|167967516|ref|ZP_02549793.1| hypothetical deaminase [Mycobacterium tuberculosis H37Ra] gi|215402619|ref|ZP_03414800.1| deaminase [Mycobacterium tuberculosis 02_1987] gi|215410407|ref|ZP_03419215.1| deaminase [Mycobacterium tuberculosis 94_M4241A] gi|215429679|ref|ZP_03427598.1| deaminase [Mycobacterium tuberculosis EAS054] gi|219556687|ref|ZP_03535763.1| deaminase [Mycobacterium tuberculosis T17] gi|224989223|ref|YP_002643910.1| putative deaminase [Mycobacterium bovis BCG str. Tokyo 172] gi|253797775|ref|YP_003030776.1| deaminase [Mycobacterium tuberculosis KZN 1435] gi|254231141|ref|ZP_04924468.1| hypothetical protein TBCG_00818 [Mycobacterium tuberculosis C] gi|254363766|ref|ZP_04979812.1| hypothetical deaminase [Mycobacterium tuberculosis str. Haarlem] gi|260199843|ref|ZP_05767334.1| deaminase [Mycobacterium tuberculosis T46] gi|260204018|ref|ZP_05771509.1| deaminase [Mycobacterium tuberculosis K85] gi|289442232|ref|ZP_06431976.1| deaminase [Mycobacterium tuberculosis T46] gi|289553086|ref|ZP_06442296.1| deaminase [Mycobacterium tuberculosis KZN 605] gi|289568782|ref|ZP_06449009.1| deaminase [Mycobacterium tuberculosis T17] gi|289573447|ref|ZP_06453674.1| deaminase [Mycobacterium tuberculosis K85] gi|289744553|ref|ZP_06503931.1| deaminase [Mycobacterium tuberculosis 02_1987] gi|289752878|ref|ZP_06512256.1| hypothetical deaminase [Mycobacterium tuberculosis EAS054] gi|289756916|ref|ZP_06516294.1| deaminase [Mycobacterium tuberculosis T85] gi|289760958|ref|ZP_06520336.1| deaminase [Mycobacterium tuberculosis GM 1503] gi|294996308|ref|ZP_06801999.1| deaminase [Mycobacterium tuberculosis 210] gi|297633340|ref|ZP_06951120.1| deaminase [Mycobacterium tuberculosis KZN 4207] gi|297730324|ref|ZP_06959442.1| deaminase [Mycobacterium tuberculosis KZN R506] gi|298524324|ref|ZP_07011733.1| hypothetical deaminase [Mycobacterium tuberculosis 94_M4241A] gi|306774951|ref|ZP_07413288.1| deaminase [Mycobacterium tuberculosis SUMu001] gi|306782137|ref|ZP_07420474.1| deaminase [Mycobacterium tuberculosis SUMu002] gi|306783494|ref|ZP_07421816.1| deaminase [Mycobacterium tuberculosis SUMu003] gi|306787858|ref|ZP_07426180.1| deaminase [Mycobacterium tuberculosis SUMu004] gi|306794851|ref|ZP_07433153.1| deaminase [Mycobacterium tuberculosis SUMu005] gi|306796597|ref|ZP_07434899.1| deaminase [Mycobacterium tuberculosis SUMu006] gi|306802455|ref|ZP_07439123.1| deaminase [Mycobacterium tuberculosis SUMu008] gi|306806664|ref|ZP_07443332.1| deaminase [Mycobacterium tuberculosis SUMu007] gi|306966863|ref|ZP_07479524.1| deaminase [Mycobacterium tuberculosis SUMu009] gi|306971054|ref|ZP_07483715.1| deaminase [Mycobacterium tuberculosis SUMu010] gi|307078786|ref|ZP_07487956.1| deaminase [Mycobacterium tuberculosis SUMu011] gi|307083347|ref|ZP_07492460.1| deaminase [Mycobacterium tuberculosis SUMu012] gi|313657649|ref|ZP_07814529.1| deaminase [Mycobacterium tuberculosis KZN V2475] gi|2916886|emb|CAA17634.1| POSSIBLE DEAMINASE [Mycobacterium tuberculosis H37Rv] gi|31617603|emb|CAD93713.1| POSSIBLE DEAMINASE [Mycobacterium bovis AF2122/97] gi|121492399|emb|CAL70867.1| Possible deaminase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600200|gb|EAY59210.1| hypothetical protein TBCG_00818 [Mycobacterium tuberculosis C] gi|134149280|gb|EBA41325.1| hypothetical deaminase [Mycobacterium tuberculosis str. Haarlem] gi|148504758|gb|ABQ72567.1| putative deaminase [Mycobacterium tuberculosis H37Ra] gi|148720562|gb|ABR05187.1| hypothetical deaminase [Mycobacterium tuberculosis F11] gi|224772336|dbj|BAH25142.1| putative deaminase [Mycobacterium bovis BCG str. Tokyo 172] gi|253319279|gb|ACT23882.1| deaminase [Mycobacterium tuberculosis KZN 1435] gi|289415151|gb|EFD12391.1| deaminase [Mycobacterium tuberculosis T46] gi|289437718|gb|EFD20211.1| deaminase [Mycobacterium tuberculosis KZN 605] gi|289537878|gb|EFD42456.1| deaminase [Mycobacterium tuberculosis K85] gi|289542536|gb|EFD46184.1| deaminase [Mycobacterium tuberculosis T17] gi|289685081|gb|EFD52569.1| deaminase [Mycobacterium tuberculosis 02_1987] gi|289693465|gb|EFD60894.1| hypothetical deaminase [Mycobacterium tuberculosis EAS054] gi|289708464|gb|EFD72480.1| deaminase [Mycobacterium tuberculosis GM 1503] gi|289712480|gb|EFD76492.1| deaminase [Mycobacterium tuberculosis T85] gi|298494118|gb|EFI29412.1| hypothetical deaminase [Mycobacterium tuberculosis 94_M4241A] gi|308216505|gb|EFO75904.1| deaminase [Mycobacterium tuberculosis SUMu001] gi|308325158|gb|EFP14009.1| deaminase [Mycobacterium tuberculosis SUMu002] gi|308331715|gb|EFP20566.1| deaminase [Mycobacterium tuberculosis SUMu003] gi|308335513|gb|EFP24364.1| deaminase [Mycobacterium tuberculosis SUMu004] gi|308336856|gb|EFP25707.1| deaminase [Mycobacterium tuberculosis SUMu005] gi|308342990|gb|EFP31841.1| deaminase [Mycobacterium tuberculosis SUMu006] gi|308346873|gb|EFP35724.1| deaminase [Mycobacterium tuberculosis SUMu007] gi|308350814|gb|EFP39665.1| deaminase [Mycobacterium tuberculosis SUMu008] gi|308355447|gb|EFP44298.1| deaminase [Mycobacterium tuberculosis SUMu009] gi|308359403|gb|EFP48254.1| deaminase [Mycobacterium tuberculosis SUMu010] gi|308363308|gb|EFP52159.1| deaminase [Mycobacterium tuberculosis SUMu011] gi|308366959|gb|EFP55810.1| deaminase [Mycobacterium tuberculosis SUMu012] gi|326904953|gb|EGE51886.1| deaminase [Mycobacterium tuberculosis W-148] gi|328457555|gb|AEB02978.1| deaminase [Mycobacterium tuberculosis KZN 4207] Length = 140 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 25/55 (45%) Query: 46 ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + D TAHAE LAIR C L E L L V PC MC ++ + + Sbjct: 13 QTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSLYYCSPDEVVF 67 >gi|330799921|ref|XP_003287989.1| hypothetical protein DICPUDRAFT_33347 [Dictyostelium purpureum] gi|325082013|gb|EGC35510.1| hypothetical protein DICPUDRAFT_33347 [Dictyostelium purpureum] Length = 182 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 12/106 (11%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISR-AGNRNRELKDVTAHAEILAIRM- 61 +M AL+ + + + GA V N + + N+ + H EI AI Sbjct: 49 HEKYMKIALD--RVIEVNGK--FGAAIVHKNGTLMCVSVNQGSVSR--IYHGEIAAIINC 102 Query: 62 ----GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + + Q + +Y T EPC MC+AAI ++ ++ +G+ Sbjct: 103 TNIFASKGIVQPTWEDYYIYTTGEPCPMCSAAIMWSKFDKVIFGSY 148 >gi|228993069|ref|ZP_04152992.1| ComE operon protein 2 [Bacillus pseudomycoides DSM 12442] gi|228999119|ref|ZP_04158701.1| ComE operon protein 2 [Bacillus mycoides Rock3-17] gi|229006667|ref|ZP_04164301.1| ComE operon protein 2 [Bacillus mycoides Rock1-4] gi|228754528|gb|EEM03939.1| ComE operon protein 2 [Bacillus mycoides Rock1-4] gi|228760736|gb|EEM09700.1| ComE operon protein 2 [Bacillus mycoides Rock3-17] gi|228766717|gb|EEM15357.1| ComE operon protein 2 [Bacillus pseudomycoides DSM 12442] Length = 185 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ A+ + ++ Sbjct: 28 VGATIVRDKRIIAGGYNGSITGGVHCIDDGCYIIDNHCVRTIHAEMNALLQCAKFGAKT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 ++YVT PC C AI + I +YY Sbjct: 87 -EGAEIYVTHFPCLQCCKAIIQSGITAVYYA 116 >gi|77919044|ref|YP_356859.1| deoxycytidylate deaminase [Pelobacter carbinolicus DSM 2380] gi|77545127|gb|ABA88689.1| deoxycytidylate deaminase [Pelobacter carbinolicus DSM 2380] Length = 158 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 49/127 (38%), Gaps = 32/127 (25%) Query: 5 NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-------------RELKD 49 FM A A+ + R VGAV V + I++ N R+L++ Sbjct: 8 EYFMEIARLVARRSTCLRRQ---VGAVLVKDKNILATGYNGTPSGLRHCSEVGCLRQLQN 64 Query: 50 VTA----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 V + HAE AI + + + L+ T PC +C+ I A IR++ Sbjct: 65 VPSGERHELCRGLHAEQNAIIQAAKHGTN--ISGAILFCTNTPCVICSKMIINAGIRQVV 122 Query: 100 Y--GASN 104 Y G + Sbjct: 123 YLDGYPD 129 >gi|227824235|ref|ZP_03989067.1| dCMP deaminase [Acidaminococcus sp. D21] gi|226904734|gb|EEH90652.1| dCMP deaminase [Acidaminococcus sp. D21] Length = 153 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 46/134 (34%), Gaps = 33/134 (24%) Query: 1 MKK---GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN------------- 42 MK+ + FM A A+ + R VGAV V + +I++ N Sbjct: 1 MKRPDWDSYFMEIAEVVAKRSTCLRRQ---VGAVLVKDRQILATGYNGTPKGIAHCEEVG 57 Query: 43 -RNRELKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 +L + HAE A+ LY T +PC +C+ + Sbjct: 58 CLREQLHVPSGQNHELCRGIHAEQNAVIQAAVNGVST--KGATLYCTHQPCVVCSKILIN 115 Query: 93 ARIRRLYYGASNPK 106 A I R+ Y P Sbjct: 116 AGIERIVYAHPYPD 129 >gi|296140262|ref|YP_003647505.1| riboflavin biosynthesis protein RibD [Tsukamurella paurometabola DSM 20162] gi|296028396|gb|ADG79166.1| riboflavin biosynthesis protein RibD [Tsukamurella paurometabola DSM 20162] Length = 332 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 42/112 (37%), Gaps = 16/112 (14%) Query: 8 MSCALEE--AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 ++ A+EE A PVGAV + + ++ R HAE++A+ Sbjct: 11 LTLAIEESVAARGVSTPNPPVGAVILAADGTVA-GRGRTAPAGGP--HAEVVALAEAGDA 67 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 VTLEPC C A+ A I R+ Y A++P Sbjct: 68 A-----RGGTAVVTLEPCDHTGRTGPCTQALIAAGIARVAYAAADPNPVAAG 114 >gi|269793169|ref|YP_003318073.1| CMP/dCMP deaminase zinc-binding protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100804|gb|ACZ19791.1| CMP/dCMP deaminase zinc-binding protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 159 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 40/120 (33%), Gaps = 26/120 (21%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 F+ A + A + VGAV V + I+S N +L Sbjct: 16 DVYFLKIAEQVATRSTCLR-RAVGAVLVRDQYIVSTGYNGAPRGTTHCLDLGCLREQLGV 74 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + H EI AI + LY T EPC+ C A+ A IR + + Sbjct: 75 PSGQRHEICRGSHGEINAICQAAAMGVST--AGCTLYCTHEPCSFCTKALIGAGIREVVF 132 >gi|22537844|ref|NP_688695.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae 2603V/R] gi|25011789|ref|NP_736184.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae NEM316] gi|76788185|ref|YP_330315.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae A909] gi|77406599|ref|ZP_00783646.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae H36B] gi|77409272|ref|ZP_00785978.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae COH1] gi|77412446|ref|ZP_00788751.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae CJB111] gi|77413936|ref|ZP_00790111.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae 515] gi|22534739|gb|AAN00568.1|AE014269_12 cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae 2603V/R] gi|24413330|emb|CAD47409.1| Unknown [Streptococcus agalactiae NEM316] gi|76563242|gb|ABA45826.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae A909] gi|77160021|gb|EAO71157.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae 515] gi|77161510|gb|EAO72516.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae CJB111] gi|77172104|gb|EAO75267.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae COH1] gi|77174792|gb|EAO77614.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus agalactiae H36B] gi|319745690|gb|EFV97989.1| cytidine/deoxycytidylate deaminase [Streptococcus agalactiae ATCC 13813] Length = 150 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 33/126 (26%), Positives = 47/126 (37%), Gaps = 19/126 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V NN+II+ N D T HAE+ A+ + Sbjct: 28 VGAVLVKNNRIIATGYNGGVSETDNCNEVGHYMEDGHCIRTVHAEMNALIQCAKEGISTN 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY-GASNPKGGGIENGTQFYTLATCHHSPEIY 129 ++YVT PC C A+ A ++++ Y P IE H PE+ Sbjct: 88 --NTEIYVTHFPCINCTKALLQAGVKKITYKANYRPHPFAIELMEAKGVAYVQHDVPEVT 145 Query: 130 PGISEQ 135 G E+ Sbjct: 146 LG-MEE 150 >gi|323720752|gb|EGB29824.1| deaminase [Mycobacterium tuberculosis CDC1551A] Length = 159 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 25/55 (45%) Query: 46 ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + D TAHAE LAIR C L E L L V PC MC ++ + + Sbjct: 32 QTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSLYYCSPDEVVF 86 >gi|326336121|ref|ZP_08202293.1| cytidine/deoxycytidylate deaminase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691630|gb|EGD33597.1| cytidine/deoxycytidylate deaminase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 150 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 19/116 (16%) Query: 1 MKK----GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV------ 50 M+K +M A E A+ + + + VGA+ V + IIS N D Sbjct: 1 MEKQERYDRAYMRMAQEWAKLSYSQRKQ-VGAIIVKDRMIISDGYNGTPTGFDNCCEDEQ 59 Query: 51 ------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI LY+T+ PC C+ I A I R+ Y Sbjct: 60 GQTLWYVLHAEANAILKVAASTQS--CAGATLYITMSPCKECSKLIHQAGIIRVVY 113 >gi|323142103|ref|ZP_08076951.1| ComE operon protein 2 family protein [Phascolarctobacterium sp. YIT 12067] gi|322413490|gb|EFY04361.1| ComE operon protein 2 family protein [Phascolarctobacterium sp. YIT 12067] Length = 152 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 42/126 (33%), Gaps = 26/126 (20%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 + FM A + + VGAV V N +I++ N +L Sbjct: 10 DDYFMEIARVVSSRSTCMR-RSVGAVIVKNKQIVATGYNGTPKDLPHCEVTGCLREQLHV 68 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE A+ + LY T +PC +C + A I+R+ Y Sbjct: 69 PSGQMHELCRGIHAEQNAVVQAA--YHGVSVNGGTLYCTHQPCVVCTKILINAGIKRIVY 126 Query: 101 GASNPK 106 P Sbjct: 127 ANPYPD 132 >gi|296283379|ref|ZP_06861377.1| riboflavin-specific deaminase/reductase [Citromicrobium bathyomarinum JL354] Length = 323 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 36/104 (34%), Gaps = 16/104 (15%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VG V V +++ R + HAE +A+ M D+Y TLEPC Sbjct: 32 VGCVIVQAGRVVGRGW--TQAGGRP--HAEAMALEMAGDAA-----TGADVYATLEPCAH 82 Query: 84 -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C + AR R+ G +P G + A Sbjct: 83 QSPRGPACTDRLIEARPARVVIGQIDPDPRTAGQGIERLHAAGI 126 >gi|149237721|ref|XP_001524737.1| DRAP deaminase [Lodderomyces elongisporus NRRL YB-4239] gi|146451334|gb|EDK45590.1| DRAP deaminase [Lodderomyces elongisporus NRRL YB-4239] Length = 622 Score = 69.2 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Query: 1 MKKGNVFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 + +M AL+EA+ + + VG V VL+ ++IS +R E HAE A+ Sbjct: 452 IDYNRKYMEMALDEARKCGETQTQFNVGCVLVLDGEVISTGHSRELEGN---THAEQCAL 508 Query: 60 RMG-CRILSQEILP-EVDLYVTLEPC 83 + +P +LY T+EPC Sbjct: 509 EKYFAKNGGIRDVPLGTELYTTMEPC 534 >gi|319939068|ref|ZP_08013432.1| ComE operon protein 2 family protein [Streptococcus anginosus 1_2_62CV] gi|319812118|gb|EFW08384.1| ComE operon protein 2 family protein [Streptococcus anginosus 1_2_62CV] Length = 155 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 42/112 (37%), Gaps = 19/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------DV-- 50 F + AL A + + VGAV V +NK+IS N + D Sbjct: 9 DEYFAAQALLIANRSTCKR-ASVGAVIVKDNKVISTGYNGSVSGTEHCIDHECLIVDGHC 67 Query: 51 --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI G + +YVT PC C + +R+ Y Sbjct: 68 VRTLHAEVNAILQGAERGIPK---GFTVYVTHFPCLNCTKQLLQVGCKRVVY 116 >gi|87200870|ref|YP_498127.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Novosphingobium aromaticivorans DSM 12444] gi|87136551|gb|ABD27293.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Novosphingobium aromaticivorans DSM 12444] Length = 323 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 38/121 (31%), Gaps = 18/121 (14%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ A R VGAV V + ++ R + HAE A+ Sbjct: 5 DDLRWLDAAASLGARGRPLSRPNPAVGAVIVNDGVVVGRGW--TQAGGRP--HAEAGALM 60 Query: 61 MGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 LYVTLEPC C + + + + R+ G +P G Sbjct: 61 AAGDAAQ-----GATLYVTLEPCAHASERGPSCTSLVLKSGLARVVIGIEDPDPRTAGGG 115 Query: 114 T 114 Sbjct: 116 I 116 >gi|209809706|ref|YP_002265245.1| putative cytidine and deoxycytidylate deaminase [Aliivibrio salmonicida LFI1238] gi|21311445|gb|AAM46726.1|AF452135_11 RibG [Aliivibrio salmonicida] gi|208011269|emb|CAQ81710.1| putative cytidine and deoxycytidylate deaminase [Aliivibrio salmonicida LFI1238] Length = 147 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 18/87 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV +N+I+S N T HAE AI R L Sbjct: 27 VGAVITKHNRIVSVGFNGYPHGVSDSADTDDRELKYLKTLHAEENAILFAKR-----DLE 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLY 99 + D++VT PC CAA I I ++Y Sbjct: 82 DCDIWVTHFPCPNCAAKIIQTGISKVY 108 >gi|323485387|ref|ZP_08090735.1| hypothetical protein HMPREF9474_02486 [Clostridium symbiosum WAL-14163] gi|323694149|ref|ZP_08108328.1| dCMP deaminase [Clostridium symbiosum WAL-14673] gi|323401250|gb|EGA93600.1| hypothetical protein HMPREF9474_02486 [Clostridium symbiosum WAL-14163] gi|323501866|gb|EGB17749.1| dCMP deaminase [Clostridium symbiosum WAL-14673] Length = 177 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 40/138 (28%), Positives = 55/138 (39%), Gaps = 35/138 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + FM A + +A+R++ P VGA V +NKI+S N Sbjct: 22 ITWDEYFMGVA----KLSAMRSKDPSTQVGACIVSGDNKILSMGYNGFPKGCSDDEFPWG 77 Query: 43 RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 + E +D T H+E+ AI L LYVTL PC CA AI A I Sbjct: 78 KELETEDPYNAKYFYTTHSELNAILN----YRGGSLEGSKLYVTLFPCNECAKAIIQAGI 133 Query: 96 RRLYYGASNPKGGGIENG 113 + L Y + K G + Sbjct: 134 KTLIY--DSDKYGATPSV 149 >gi|323704821|ref|ZP_08116398.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacterium xylanolyticum LX-11] gi|323535747|gb|EGB25521.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacterium xylanolyticum LX-11] Length = 172 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGAV V + IIS N L + HAE AI Sbjct: 51 VGAVIVKDKHIISTGYNGAPTGLKHCEEVGCMRESLNIPSGERHELCRGTHAEQNAIIQA 110 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L+ + +YV+ PC+MCA I A I+R+ Y Sbjct: 111 A--LNGVSTKDATIYVSASPCSMCAKMIINAGIKRVVY 146 >gi|294793764|ref|ZP_06758901.1| probable deoxycytidylate deaminase [Veillonella sp. 3_1_44] gi|294455334|gb|EFG23706.1| probable deoxycytidylate deaminase [Veillonella sp. 3_1_44] Length = 159 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 29/121 (23%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN---RNRELKDVTA- 52 + FM A+ AQ + P VGA V +NKI+S N N D T Sbjct: 8 ISWNEYFMGVAILAAQRSKD----PNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWE 63 Query: 53 -------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 H+E+ AI L +YVTL PC CA AI + I+ + Sbjct: 64 RDTADDNKYFYTVHSELNAILN----YRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVI 119 Query: 100 Y 100 Y Sbjct: 120 Y 120 >gi|302345385|ref|YP_003813738.1| dCMP deaminase family protein [Prevotella melaninogenica ATCC 25845] gi|302149570|gb|ADK95832.1| dCMP deaminase family protein [Prevotella melaninogenica ATCC 25845] Length = 166 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 43/110 (39%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 ++ A A+N+ + VGA+ V + IIS N + VT Sbjct: 25 DYRYLRMARIWAENSYCKR-RQVGALVVKDKMIISDGYNGTPSGFENICEDESGVTKPYV 83 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC CA I A IRR+ Y Sbjct: 84 LHAEANAITKLARSGNNS--EGSTLYVTASPCIECAKLIIQAGIRRVVYA 131 >gi|330833249|ref|YP_004402074.1| deoxycytidylate deaminase [Streptococcus suis ST3] gi|329307472|gb|AEB81888.1| deoxycytidylate deaminase [Streptococcus suis ST3] Length = 155 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 19/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---------------LK 48 F + AL A A + VGAV V +NK+I+ N + Sbjct: 9 DEYFAAQALLIANRATCKRAK-VGAVLVKDNKVIATGYNGSVSGTEHCLDQECLMIDGHC 67 Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI G + YVT PC C+ + +R+ Y Sbjct: 68 ARTLHAEVNAILQGAERGIPK---GFTAYVTHFPCLNCSKQLLQVGCKRVVY 116 >gi|331223607|ref|XP_003324476.1| hypothetical protein PGTG_05282 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309303466|gb|EFP80057.1| hypothetical protein PGTG_05282 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 406 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 31/58 (53%) Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 +L ++++ EPC +C+ A+ +RI+ L++ A +P+ GG + + +H Sbjct: 328 YLLTNQIVFLSHEPCLLCSMALLHSRIKHLFFLAPSPRSGGCGSVYNVHEQDGLNHKF 385 >gi|288803361|ref|ZP_06408794.1| cytidine/deoxycytidylate deaminase family protein [Prevotella melaninogenica D18] gi|288334181|gb|EFC72623.1| cytidine/deoxycytidylate deaminase family protein [Prevotella melaninogenica D18] Length = 166 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 43/110 (39%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 ++ A A+N+ + VGA+ V + IIS N + VT Sbjct: 25 DYRYLRMARIWAENSYCKR-RQVGALVVKDKMIISDGYNGTPSGFENICEDESGVTKPYV 83 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC CA I A IRR+ Y Sbjct: 84 LHAEANAITKLARSGNNS--EGSTLYVTASPCIECAKLIIQAGIRRVVYA 131 >gi|322391647|ref|ZP_08065115.1| cytidine and deoxycytidylate deaminase [Streptococcus peroris ATCC 700780] gi|321145458|gb|EFX40851.1| cytidine and deoxycytidylate deaminase [Streptococcus peroris ATCC 700780] Length = 155 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 40/117 (34%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRE------LKDV-- 50 F + AL A + A VGAV V +NK+IS N + D Sbjct: 9 DEYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHDCLV 62 Query: 51 -------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI G + YVT PC C + R+ Y Sbjct: 63 IEGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCERVVY 116 >gi|312866406|ref|ZP_07726624.1| putative ComE operon protein 2 [Streptococcus downei F0415] gi|311098100|gb|EFQ56326.1| putative ComE operon protein 2 [Streptococcus downei F0415] Length = 151 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 43/118 (36%), Gaps = 22/118 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V + +II+ N D T HAE+ A+ + Sbjct: 30 VGAVLVKDKRIIATGYNGGVSETDNCNEVGHYMEDGHCIRTVHAEMNALIQCAKEGIST- 88 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIE----NGTQFYTLATCH 123 ++YVT PC C A+ A I+++ Y A P IE G + H Sbjct: 89 -KNTEIYVTHFPCINCTKALLQAGIKKITYKADYRPNALAIELMEQKGVDYIQHDVPH 145 >gi|222055762|ref|YP_002538124.1| dCMP deaminase [Geobacter sp. FRC-32] gi|221565051|gb|ACM21023.1| dCMP deaminase [Geobacter sp. FRC-32] Length = 156 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 44/128 (34%), Gaps = 32/128 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNREL 47 FM A+ + R VGA+ V + I++ N +L Sbjct: 7 DEYFMGITHLVAKRSTCLRRQ---VGAIIVKDKNILATGYNGAPSGVSHCLDVGCLREKL 63 Query: 48 KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + HAE AI + + + LY T PC +C+ I A I+R+ Sbjct: 64 GIPSGERHELCRGLHAEQNAIIQAAKHGTG--IEGSTLYCTTMPCIICSKMIINAGIKRI 121 Query: 99 YY--GASN 104 + G + Sbjct: 122 VFEMGYPD 129 >gi|34558827|gb|AAQ75171.1| riboflavin biosynthesis protein [Alvinella pompejana epibiont 7G3] Length = 335 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 66/183 (36%), Gaps = 46/183 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M ++FM A++ A L VGA+ LN ++++ +R T+HAE+L Sbjct: 1 MLTDDIFMRVAIDRAWEYQLITYPNPAVGALVELNGRVLAVEAHREA----GTSHAEVLV 56 Query: 59 IRMGCRILSQEI----------------------LPEVDLYVTLEPC------TMCAAAI 90 + LS +YVTLEPC CA + Sbjct: 57 LLRAYEELSNRKIEFNRLDANLAHNFLLSLPRGFFSNCSIYVTLEPCSHTGKTPSCATLL 116 Query: 91 SLARIRRLYYGASNP---KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF-FK 146 S + +R+ G +P GG+E E+ + ++I+ F Sbjct: 117 SKLKPKRVVVGTLDPISSHSGGVELLKSVGVEVEVGV--------LEREAEELIEPFIIW 168 Query: 147 ERR 149 ++R Sbjct: 169 QKR 171 >gi|307111161|gb|EFN59396.1| hypothetical protein CHLNCDRAFT_137887 [Chlorella variabilis] Length = 181 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 53/152 (34%), Gaps = 22/152 (14%) Query: 2 KKGNVFMSCALEEAQNAALRN--EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILA 58 + + M ALE A VG V V + +++ + + HAE+ Sbjct: 29 EADRLHMRRALELAARGLGATYPNPAVGCVIVDASGRVLGEGFHPRAGM----PHAEV-- 82 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + YVTLEPC C+ A+ A + R+ G ++P Sbjct: 83 ---YALRAAGRAAAGATAYVTLEPCNHFGRTPPCSRALVAAGVSRVVVGCTDPNPLVGGC 139 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + A + G +Q Q+ ++F Sbjct: 140 GVKTLRDAGIVAAV----GCEQQACYQLNEEF 167 >gi|124805491|ref|XP_001350455.1| conserved Plasmodium protein [Plasmodium falciparum 3D7] gi|23496577|gb|AAN36135.1| conserved Plasmodium protein [Plasmodium falciparum 3D7] Length = 326 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 54/160 (33%), Gaps = 55/160 (34%) Query: 27 GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC----------------------- 63 G + N++II+ +G + HA +LAI Sbjct: 168 GCIITYNDEIIASSG--DNIKNHPLHHAPMLAIEQVSYKLRHIWLNKQTEKNNLQKKMKI 225 Query: 64 ----RILSQEILPE-----------------------VD---LYVTLEPCTMCAAAISLA 93 +I +++ L + +++ EPC MCA A+ + Sbjct: 226 IHKQQINNRDSLNDHKHENNKSNHNILIDHIPNDQYLCTNFFAFLSHEPCYMCAMALLHS 285 Query: 94 RIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGIS 133 RI+ + + N G + + + + + +H +++ I Sbjct: 286 RIKCVIFDKENKNNGALSSQEKLHCIKNLNHHFKVFKTIR 325 >gi|296448857|ref|ZP_06890691.1| riboflavin biosynthesis protein RibD [Methylosinus trichosporium OB3b] gi|296253636|gb|EFH00829.1| riboflavin biosynthesis protein RibD [Methylosinus trichosporium OB3b] Length = 375 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 50/146 (34%), Gaps = 21/146 (14%) Query: 2 KKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ + FM+ AL + R P VGA+ V + +I+R HA Sbjct: 9 QQDDAFMAAALAFGRRNMGRTGPNPAVGALIVKDGVVIARGATAVGGR----PHA----- 59 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 + E LY TLEPC C AI A I R+ +P G Sbjct: 60 EAVAVAAAGEAARGATLYATLEPCSHHGATPPCVDAIIGAGIARVVSALEDPDARVAGRG 119 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQ 139 A E+ G+ + +R Sbjct: 120 HARLREAG----IEVAVGVRAREARA 141 >gi|18977970|ref|NP_579327.1| dCMP deaminase [Pyrococcus furiosus DSM 3638] gi|18893746|gb|AAL81722.1| dCMP deaminase [Pyrococcus furiosus DSM 3638] Length = 185 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 38/117 (32%), Gaps = 24/117 (20%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGN---------------R 43 K FM A + A P VGAVAV + I++ N Sbjct: 21 TKDEYFMLIAKLVSLRATC----PRLRVGAVAVKDGYILATGYNGAPRSMDHCIDKGCIL 76 Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE I M R L LYVT PC C + A I+ + Y Sbjct: 77 VNGHCHRAVHAEQNVIAMAARKGIS--LEGATLYVTHFPCDTCFKLLINAGIKEIVY 131 >gi|195977496|ref|YP_002122740.1| dCMP deaminase; late competence protein ComEB [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974201|gb|ACG61727.1| dCMP deaminase; late competence protein ComEB [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 153 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V +N+II+ N D T HAE+ A+ + Sbjct: 29 VGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEEGHCIRTVHAEMNALIQCAKEGIST- 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++YVT PC C A+ A I ++ Y Sbjct: 88 -AGTEIYVTHFPCINCTKALLQAGICKITY 116 >gi|293365055|ref|ZP_06611772.1| cytidine and deoxycytidylate deaminase [Streptococcus oralis ATCC 35037] gi|307702235|ref|ZP_07639195.1| comE operon protein 2 [Streptococcus oralis ATCC 35037] gi|291316505|gb|EFE56941.1| cytidine and deoxycytidylate deaminase [Streptococcus oralis ATCC 35037] gi|307624248|gb|EFO03225.1| comE operon protein 2 [Streptococcus oralis ATCC 35037] Length = 155 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 40/117 (34%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGN--------------RN 44 F + AL A + A VGAV V +NK+IS N Sbjct: 9 DEYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 62 Query: 45 RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E V T HAE+ AI G YVT PC C + +R+ Y Sbjct: 63 IEGHCVRTLHAEVNAILQGAERGVP---RGFTAYVTHFPCLNCTKQLLQVGCKRVVY 116 >gi|311993209|ref|YP_004010075.1| dCMP deaminase [Enterobacteria phage CC31] gi|284178047|gb|ADB81713.1| dCMP deaminase [Enterobacteria phage CC31] Length = 188 Score = 68.8 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 48/149 (32%), Gaps = 51/149 (34%) Query: 26 VGAVAVLNNKIISRAGN------------------RNRELKDVTA--------------- 52 VGAV N +IIS N ++ Sbjct: 24 VGAVIEKNGRIISTGYNGSPAGGVNCCDHAEDKGWLVKKPGSGLRQDGPIPKYGLDTKFR 83 Query: 53 ------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI R S + +YVTL PC CA AI+ + I++L Y Sbjct: 84 AEHSEWSKINEIHAELNAILFAARNGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVY 141 Query: 101 GASNPKGGGIENGTQFYTLAT--CHHSPE 127 + K I+ A HH P+ Sbjct: 142 CETYDKN--IDGWDNILRDAGIEIHHVPK 168 >gi|331703568|ref|YP_004400255.1| deoxycytidylate deaminase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802123|emb|CBW54277.1| Deoxycytidylate deaminase (dCMP deaminase) [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 146 Score = 68.8 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 26/100 (26%) Query: 26 VGAVAVLN-NKIISRAGNR-NRELKD---V---------------TAHAEILAIRMGCRI 65 VGA+ V +I++ N R + D AHAE+ AI + Sbjct: 18 VGAIVVNELQQIVATGYNGFPRGVSDDEFPWSKNNEDWLENKYAYVAHAELNAI-----V 72 Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 S+ L DLYVTL PC CA I A I+R+YY A++P Sbjct: 73 SSRSDLSNCDLYVTLFPCNECAKIIIQAGIKRIYY-ANDP 111 >gi|325268984|ref|ZP_08135605.1| cytidine/deoxycytidylate deaminase [Prevotella multiformis DSM 16608] gi|324988605|gb|EGC20567.1| cytidine/deoxycytidylate deaminase [Prevotella multiformis DSM 16608] Length = 175 Score = 68.8 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 43/110 (39%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 ++ A A+N+ R VGA+ V + IIS N + VT Sbjct: 26 DYRYLRMARIWAENSYCRR-RQVGALVVKDKMIISDGYNGTPSGFENVCEDEAGVTKPYV 84 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC C+ I A IRR+ Y Sbjct: 85 LHAEANAITKLARSGNNSD--GSTLYVTASPCIECSKLIIQAGIRRVVYA 132 >gi|227877964|ref|ZP_03995968.1| competence protein ComEB family protein [Lactobacillus crispatus JV-V01] gi|256844344|ref|ZP_05549830.1| dCMP deaminase [Lactobacillus crispatus 125-2-CHN] gi|256849252|ref|ZP_05554685.1| dCMP deaminase [Lactobacillus crispatus MV-1A-US] gi|293381479|ref|ZP_06627474.1| putative ComE operon protein 2 [Lactobacillus crispatus 214-1] gi|312978355|ref|ZP_07790097.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus crispatus CTV-05] gi|227862434|gb|EEJ69949.1| competence protein ComEB family protein [Lactobacillus crispatus JV-V01] gi|256613422|gb|EEU18625.1| dCMP deaminase [Lactobacillus crispatus 125-2-CHN] gi|256714028|gb|EEU29016.1| dCMP deaminase [Lactobacillus crispatus MV-1A-US] gi|290921949|gb|EFD98956.1| putative ComE operon protein 2 [Lactobacillus crispatus 214-1] gi|310894698|gb|EFQ43770.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus crispatus CTV-05] Length = 159 Score = 68.8 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 18/111 (16%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV---------- 50 FM AL AQ + + VG+V V NN+II N + + DV Sbjct: 9 QYFMMQALVIAQRSTCNRAL-VGSVLVKNNRIIGTGYNGSVSGQPHCDDVGHQMVDGHCV 67 Query: 51 -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H+E+ AI + ++YVT PC C ++ A ++++ Y Sbjct: 68 RTIHSEMNAIIQCAKFGVST--ENTEIYVTHFPCYNCCKSLLQAGVKKINY 116 >gi|227549213|ref|ZP_03979262.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Corynebacterium lipophiloflavum DSM 44291] gi|227078667|gb|EEI16630.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Corynebacterium lipophiloflavum DSM 44291] Length = 324 Score = 68.8 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 41/122 (33%), Gaps = 21/122 (17%) Query: 15 AQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73 A A PVG ++I+ G AHAEI A+R Sbjct: 15 AVRGATSPNPPVGCALFSPEGELIATGGTSPAGG----AHAEINALRAAG-----SRARG 65 Query: 74 VDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 VTLEPC CA A++ A+I RL Y ++P H E Sbjct: 66 ATAVVTLEPCNHTGRTGPCAKALADAQIARLVYLTTDPNPQAAGGADYLAR-----HGVE 120 Query: 128 IY 129 + Sbjct: 121 VV 122 >gi|299753369|ref|XP_001833230.2| diaminohydroxyphosphoribosylamino-pyrimidine deaminase [Coprinopsis cinerea okayama7#130] gi|298410269|gb|EAU88503.2| diaminohydroxyphosphoribosylamino-pyrimidine deaminase [Coprinopsis cinerea okayama7#130] Length = 170 Score = 68.8 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 37/135 (27%), Positives = 52/135 (38%), Gaps = 37/135 (27%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP----VGAVAV----LNNKIISRAGNRNRELKDVTAH 53 V+M ALEEA+ A +P VG V V + ++S +R H Sbjct: 5 DDHIVYMKMALEEAEKAV---PVPGAFCVGCVLVARLLHKSVVLSTGYSRELPGN---TH 58 Query: 54 AEILAIRMGCRILSQEI----------------LPEVDLYVTLEPC-------TMCAAAI 90 AE A+ I +E L D+Y TLEPC + CA A+ Sbjct: 59 AEANALAKVAEISPKEWSALSESYEASSDLSKILECTDVYTTLEPCSIRTSGLSPCADAL 118 Query: 91 SLARIRRLYYGASNP 105 A++RR G + P Sbjct: 119 IKAKVRRCIIGVNEP 133 >gi|257868066|ref|ZP_05647719.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus EC30] gi|257874396|ref|ZP_05654049.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus EC10] gi|257876955|ref|ZP_05656608.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus EC20] gi|257802149|gb|EEV31052.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus EC30] gi|257808560|gb|EEV37382.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus EC10] gi|257811121|gb|EEV39941.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus EC20] Length = 165 Score = 68.8 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 20/113 (17%) Query: 4 GNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRE---------------L 47 FM+ A+ + + R E VGA V + +II+ N + Sbjct: 9 DQYFMAQAVLLSLRSTCSRLE--VGATLVKDRRIIAGGYNGSVSGDVHCIDDGCYVVDDH 66 Query: 48 KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ ++ ++YVT PC C AI A ++ ++Y Sbjct: 67 CIRTIHAEMNALLQCAKLGVSTD--NAEIYVTHFPCLPCTKAILQAGVKTIHY 117 >gi|331092051|ref|ZP_08340882.1| hypothetical protein HMPREF9477_01525 [Lachnospiraceae bacterium 2_1_46FAA] gi|330402252|gb|EGG81823.1| hypothetical protein HMPREF9477_01525 [Lachnospiraceae bacterium 2_1_46FAA] Length = 162 Score = 68.8 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 46/123 (37%), Gaps = 31/123 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR------------N 44 + FM A+ + P VG V +NKI+S N Sbjct: 9 ISWDEYFMGVAMLSGMRSKD----PSTQVGCCIVSQDNKILSMGYNGLPKGCSDDEFPWT 64 Query: 45 RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 RE +D T H+E+ AI S L LYV+L PC CA AI + I+ Sbjct: 65 REGEDPLETKYVYTVHSELNAILN----YSGGSLAGAKLYVSLFPCNECAKAIIQSGIKE 120 Query: 98 LYY 100 + Y Sbjct: 121 VVY 123 >gi|322374651|ref|ZP_08049165.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus sp. C300] gi|321280151|gb|EFX57190.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus sp. C300] Length = 155 Score = 68.8 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 40/117 (34%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGN--------------RN 44 F + AL A + A VGAV V +NK+IS N Sbjct: 9 DEYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 62 Query: 45 RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E V T HAE+ AI G YVT PC C + +R+ Y Sbjct: 63 IEGHCVRTLHAEVNAILQGAERGVP---RGFTAYVTHFPCLNCTKQLLQVGCKRVVY 116 >gi|258623229|ref|ZP_05718238.1| deoxycytidylate deaminase, putative [Vibrio mimicus VM573] gi|258627669|ref|ZP_05722443.1| deoxycytidylate deaminase, putative [Vibrio mimicus VM603] gi|262173485|ref|ZP_06041162.1| deoxycytidylate deaminase [Vibrio mimicus MB-451] gi|262403414|ref|ZP_06079972.1| deoxycytidylate deaminase [Vibrio sp. RC586] gi|258580040|gb|EEW05015.1| deoxycytidylate deaminase, putative [Vibrio mimicus VM603] gi|258584527|gb|EEW09267.1| deoxycytidylate deaminase, putative [Vibrio mimicus VM573] gi|261890843|gb|EEY36830.1| deoxycytidylate deaminase [Vibrio mimicus MB-451] gi|262349918|gb|EEY99053.1| deoxycytidylate deaminase [Vibrio sp. RC586] Length = 160 Score = 68.8 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 18/87 (20%) Query: 26 VGAVAVLNNKIISRAGN---------RNRELKDV----TAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N + + +D+ T HAE AI R L Sbjct: 27 VGAVITKQNRIVSVGFNGYPHGISDSASTDDRDMKYLKTLHAEENAILFAKR-----DLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLY 99 ++YVT PC CAA I I +Y Sbjct: 82 GCEIYVTHFPCPNCAAKIIQTGIAAVY 108 >gi|229086897|ref|ZP_04219056.1| ComE operon protein 2 [Bacillus cereus Rock3-44] gi|228696407|gb|EEL49233.1| ComE operon protein 2 [Bacillus cereus Rock3-44] Length = 185 Score = 68.8 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 18/97 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + + Sbjct: 28 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 + ++YVT PC C AI + I +YY A + K Sbjct: 87 -EDAEIYVTHFPCLQCCKAIIQSGITAVYY-ARDYKN 121 >gi|126662522|ref|ZP_01733521.1| putative deoxycytidylate deaminase [Flavobacteria bacterium BAL38] gi|126625901|gb|EAZ96590.1| putative deoxycytidylate deaminase [Flavobacteria bacterium BAL38] Length = 142 Score = 68.8 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 15/109 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51 ++ A E + + + VGA+ V N IIS N + ++T Sbjct: 10 DKAYLRIAKEWGNLSYCQRKK-VGAIIVKNKMIISDGYNGTPSGFENCCEDDANITKWYV 68 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI R + LY+TL PC C+ I + I+R+ Y Sbjct: 69 LHAEANAILKVARSTQS--CEDATLYITLSPCKDCSKLIHQSGIKRVVY 115 >gi|116333998|ref|YP_795525.1| deoxycytidylate deaminase [Lactobacillus brevis ATCC 367] gi|116099345|gb|ABJ64494.1| Deoxycytidylate deaminase [Lactobacillus brevis ATCC 367] Length = 159 Score = 68.8 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 18/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-------------- 49 FM AL + + + VGA V + +II+ N + D Sbjct: 9 DQYFMLQALVMSTRSTCNR-LSVGATIVRDKRIIAAGYNGSVSGDDHCLDEGCYLVDGHC 67 Query: 50 -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ + ++YVT PC C + A I ++ Y Sbjct: 68 VRTIHAEMNAVLQCAKFGEATD--GAEIYVTDFPCLQCTKMLLQAGITKITY 117 >gi|295692075|ref|YP_003600685.1| dcmp deaminase [Lactobacillus crispatus ST1] gi|295030181|emb|CBL49660.1| dCMP deaminase [Lactobacillus crispatus ST1] Length = 159 Score = 68.8 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 18/111 (16%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV---------- 50 FM AL AQ + + VG+V V NN+II N + + DV Sbjct: 9 QYFMMQALVIAQRSTCNRAL-VGSVLVKNNRIIGTGYNGSVSGQPHCDDVGHQMVDGHCV 67 Query: 51 -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H+E+ AI + ++YVT PC C ++ A ++++ Y Sbjct: 68 RTIHSEMNAIIQCAKFGVST--ENTEIYVTHFPCYNCCKSLLQAGVKKINY 116 >gi|166033064|ref|ZP_02235893.1| hypothetical protein DORFOR_02786 [Dorea formicigenerans ATCC 27755] gi|166027421|gb|EDR46178.1| hypothetical protein DORFOR_02786 [Dorea formicigenerans ATCC 27755] Length = 162 Score = 68.8 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 35/126 (27%), Positives = 50/126 (39%), Gaps = 31/126 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR------------N 44 + FM A + + LR++ P VG V +NKI+S N Sbjct: 9 INWDEYFMGVA----KLSGLRSKDPNTQVGCCIVSQDNKILSMGYNGLPKGCSDDEFPWV 64 Query: 45 RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 RE +D T H+E+ AI L LYV+L PC CA AI + I+ Sbjct: 65 REGEDPLKTKYVYTVHSELNAILN----FRGGSLEGAKLYVSLFPCNECAKAIIQSGIKE 120 Query: 98 LYYGAS 103 + Y + Sbjct: 121 VIYDCN 126 >gi|309800001|ref|ZP_07694201.1| ComE operon protein 2 [Streptococcus infantis SK1302] gi|308116400|gb|EFO53876.1| ComE operon protein 2 [Streptococcus infantis SK1302] Length = 155 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 40/117 (34%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRE------LKDV-- 50 F + AL A + A VGAV V +NK+IS N + D Sbjct: 9 DEYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHDCLV 62 Query: 51 -------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI G + YVT PC C + R+ Y Sbjct: 63 IEGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCERVVY 116 >gi|320583405|gb|EFW97618.1| DRAP deaminase, putative [Pichia angusta DL-1] Length = 569 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 5/84 (5%) Query: 2 KKGNVFMSCALEEAQNAALRNE-IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ ALE+A+ + VGAV ++IS R E HAE A+ Sbjct: 416 ETQKKYMALALEQAEKCPQIDSAFRVGAVITCGGEVISTGHTRELEGN---THAEQCAME 472 Query: 61 MGCRILSQEIL-PEVDLYVTLEPC 83 L P ++Y T+EPC Sbjct: 473 KYFEKTGSRTLPPGCEIYTTMEPC 496 >gi|255283094|ref|ZP_05347649.1| putative deoxycytidylate deaminase [Bryantella formatexigens DSM 14469] gi|255266396|gb|EET59601.1| putative deoxycytidylate deaminase [Bryantella formatexigens DSM 14469] Length = 160 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 46/125 (36%), Gaps = 30/125 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + FM A+ + P VGA V +NKI+S N Sbjct: 8 ISWDEYFMGVAMLSGMRSKD----PNTQVGACIVSSDNKILSMGYNGFPIGCSDDDFPWE 63 Query: 43 RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 R E D T H+E+ AI L LYV+L PC CA AI A I+++ Sbjct: 64 REGEALDTKYLYTTHSELNAILN----YRGGSLDGATLYVSLFPCNECAKAIIQAGIKQI 119 Query: 99 YYGAS 103 Y Sbjct: 120 VYDCD 124 >gi|225869190|ref|YP_002745138.1| cytidine and deoxycytidylate deaminase [Streptococcus equi subsp. zooepidemicus] gi|225869858|ref|YP_002745805.1| cytidine and deoxycytidylate deaminase [Streptococcus equi subsp. equi 4047] gi|225699262|emb|CAW92581.1| putative cytidine and deoxycytidylate deaminase [Streptococcus equi subsp. equi 4047] gi|225702466|emb|CAX00368.1| putative cytidine and deoxycytidylate deaminase [Streptococcus equi subsp. zooepidemicus] Length = 153 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V +N+II+ N D T HAE+ A+ + Sbjct: 29 VGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEEGHCIRTVHAEMNALIQCAKEGIST- 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++YVT PC C A+ A I ++ Y Sbjct: 88 -AGTEIYVTHFPCINCTKALLQAGICKITY 116 >gi|260900445|ref|ZP_05908840.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037] gi|308106996|gb|EFO44536.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037] gi|328470945|gb|EGF41856.1| putative deoxycytidylate deaminase [Vibrio parahaemolyticus 10329] Length = 154 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N T HAE AI + S+ L Sbjct: 27 VGAVITKQNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 D++VT PC CAA I I R+ Sbjct: 82 GCDIWVTHFPCPNCAAKIIQTGISRV 107 >gi|300853441|ref|YP_003778425.1| cytidine deaminase [Clostridium ljungdahlii DSM 13528] gi|300433556|gb|ADK13323.1| cytidine deaminase [Clostridium ljungdahlii DSM 13528] Length = 136 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 41/120 (34%), Gaps = 28/120 (23%) Query: 1 MKKG--NVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGN------------- 42 M+K N F+ A + A+ + P VGAV V N +I N Sbjct: 1 MRKDWDNYFIDIAFKVAERSTC----PRLHVGAVLVKNRRIKGTGYNGSPRGLEHCEDVG 56 Query: 43 --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ + + LYVT PC C I I+R+ Y Sbjct: 57 CYMKNNHCVRTIHAEVNCLLEVA----PDDRESSTLYVTHMPCPECQKLIITCGIKRVVY 112 >gi|62858897|ref|NP_001016265.1| dCMP deaminase [Xenopus (Silurana) tropicalis] gi|89266721|emb|CAJ83844.1| deoxycytidylate deaminase [Xenopus (Silurana) tropicalis] Length = 190 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52 FM+ A AQ + N VGA V NKI+ N D TA Sbjct: 28 EYFMAVAFLAAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCHDDVLPWARTAEDRL 86 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA + A I+ + + Sbjct: 87 DTKYPYVCHAELNAIMN----KNTADVKGCTMYVALFPCNECAKLVIQAGIKEVIF 138 >gi|254568330|ref|XP_002491275.1| Subunit of tRNA-specific adenosine-34 deaminase [Pichia pastoris GS115] gi|238031072|emb|CAY68995.1| Subunit of tRNA-specific adenosine-34 deaminase [Pichia pastoris GS115] gi|328352208|emb|CCA38607.1| hypothetical protein PP7435_Chr2-0926 [Pichia pastoris CBS 7435] Length = 305 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 9/85 (10%) Query: 53 HAEILAIRMGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 H+ +LAIR ++ +L + +Y T EPC MC A+ +RI RL + + G Sbjct: 204 HSTMLAIRDVAKLQQNDPKSYLLLDCVIYTTHEPCPMCCMALLHSRIERLVF-LKDMTTG 262 Query: 109 GI----ENGTQFYTLATCHHSPEIY 129 G+ G T T + + Y Sbjct: 263 GLKFHEGYGYGIQTACTLNWKFDAY 287 >gi|332295432|ref|YP_004437355.1| dCMP deaminase [Thermodesulfobium narugense DSM 14796] gi|332178535|gb|AEE14224.1| dCMP deaminase [Thermodesulfobium narugense DSM 14796] Length = 152 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 41/120 (34%), Gaps = 26/120 (21%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 + FM A A + VGAV V +I+S N +L Sbjct: 6 DSYFMKIAFLVATRSTCIRRK-VGAVIVKEKRILSTGYNGAPSGLLHCLDIGCLRDKLNI 64 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE AI G L +YVT +PC CA + A I ++ Y Sbjct: 65 PSGERQELCRGLHAEQNAIIQGAMYGVS--LMGSTIYVTNQPCITCAKMLIQAGIVKIVY 122 >gi|253752314|ref|YP_003025455.1| cytidine and deoxycytidylate deaminase [Streptococcus suis SC84] gi|253754140|ref|YP_003027281.1| cytidine and deoxycytidylate deaminase [Streptococcus suis P1/7] gi|253756074|ref|YP_003029214.1| cytidine and deoxycytidylate deaminase [Streptococcus suis BM407] gi|251816603|emb|CAZ52241.1| putative cytidine and deoxycytidylate deaminase [Streptococcus suis SC84] gi|251818538|emb|CAZ56369.1| putative cytidine and deoxycytidylate deaminase [Streptococcus suis BM407] gi|251820386|emb|CAR46982.1| putative cytidine and deoxycytidylate deaminase [Streptococcus suis P1/7] gi|319758710|gb|ADV70652.1| putative cytidine and deoxycytidylate deaminase [Streptococcus suis JS14] Length = 155 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 19/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---------------LK 48 F + AL A A + VGAV V +NK+I+ N + Sbjct: 9 DEYFAAQALLIANRATCKRAK-VGAVLVKDNKVIATGYNGSVSGTEHCLDQECLMIDGHC 67 Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI G + YVT PC C+ + +R+ Y Sbjct: 68 ARTLHAEVNAILQGAERGIPK---GFTAYVTHFPCLNCSKQLLQVGCKRVVY 116 >gi|149013222|ref|ZP_01834008.1| transcriptional regulator, TetR family protein [Streptococcus pneumoniae SP19-BS75] gi|147762973|gb|EDK69918.1| transcriptional regulator, TetR family protein [Streptococcus pneumoniae SP19-BS75] Length = 346 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGN--------------RN 44 F + AL A + A VGA+ V +NK+IS N Sbjct: 200 DEYFAAQALLIANRSTCKRAK------VGAILVKDNKVISTGYNGSVSGTEHCIDHECLV 253 Query: 45 RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E V T HAE+ AI G + YVT PC C + +R+ Y Sbjct: 254 IEGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 307 >gi|110638611|ref|YP_678820.1| cytidine/deoxycytidylate deaminase [Cytophaga hutchinsonii ATCC 33406] gi|110281292|gb|ABG59478.1| cytidine/deoxycytidylate deaminase (dCMP deaminase) [Cytophaga hutchinsonii ATCC 33406] Length = 159 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 23/117 (19%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV------------ 50 +++M A+ A+ + VGAV + +IIS N + + Sbjct: 8 DDIYMELAVNLAKRSHCIKRH-VGAVLTKDTRIISIGYNGPPEKTHNCDEEWPEEGCPRD 66 Query: 51 -------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI + + + +YVTL PC CA + + ++++ Y Sbjct: 67 SKGSCSLALHAEENAILFA--VKNGTEVKGATIYVTLSPCISCARLLFASGVKKVIY 121 >gi|325860320|ref|ZP_08173442.1| putative dCMP deaminase [Prevotella denticola CRIS 18C-A] gi|325482199|gb|EGC85210.1| putative dCMP deaminase [Prevotella denticola CRIS 18C-A] Length = 170 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 40/110 (36%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE------------LKDVT 51 ++ A A+N+ + VGA+ V N IIS N K Sbjct: 25 DYRYLRMAHIWAENSYCKR-RQVGALVVKNKMIISDGYNGTPSGFENVCEDEAGVTKSYV 83 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC CA I A I R+ Y Sbjct: 84 LHAEANAITKLARSGNNS--EGSTLYVTASPCIECAKLIIQAGISRVVYA 131 >gi|306829176|ref|ZP_07462366.1| cytidine and deoxycytidylate deaminase [Streptococcus mitis ATCC 6249] gi|304428262|gb|EFM31352.1| cytidine and deoxycytidylate deaminase [Streptococcus mitis ATCC 6249] Length = 155 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 40/117 (34%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGN--------------RN 44 F + AL A + A VGAV V +NK+IS N Sbjct: 9 DEYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 62 Query: 45 RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E V T HAE+ AI G YVT PC C + +R+ Y Sbjct: 63 IEGHCVRTLHAEVNAILQGAERGVP---RGFTAYVTHFPCLNCTKQLLQVGCKRVVY 116 >gi|157874070|ref|XP_001685530.1| hypothetical protein [Leishmania major strain Friedlin] gi|68128602|emb|CAJ08734.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 542 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 +DLYVT EPC MCA A+ +RI+R+++ N GG+ +++A+ +H Y Sbjct: 473 NGLDLYVTHEPCVMCAMALVHSRIQRVFFLFRNAVHGGLGGRYHLHSMASLNHHFSAYEC 532 Query: 132 ISEQRSRQI 140 + ++ Sbjct: 533 ---TEAAEL 538 >gi|171677037|ref|XP_001903470.1| hypothetical protein [Podospora anserina S mat+] gi|170936586|emb|CAP61245.1| unnamed protein product [Podospora anserina S mat+] Length = 216 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 26/142 (18%) Query: 26 VGAVAV------LNNKIISRAGNRNRELKDVTAHAEILAIRM--------GCRILSQEIL 71 G+V V +I N+N + T H E+ AI + E L Sbjct: 45 FGSVIVNHTTGNPQGTLICTGANQNSRTGNPTLHGEMAAISNCSSLFVSSAYNMTPAESL 104 Query: 72 P---EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-----GGGIENGTQFYTLATCH 123 ++ LY E C MCAAA+ A +R YG S + G + G++ + Sbjct: 105 AAFKQLTLYTNAESCPMCAAAVRWAGLREYIYGVSIKELIELGWGQLGIGSEEVIGSGVG 164 Query: 124 HS---PEIY-PGISEQRSRQII 141 PE+ G+ + S++ Sbjct: 165 MRDKDPEVVLGGVGREESKRQF 186 >gi|149742700|ref|XP_001492380.1| PREDICTED: dCMP deaminase [Equus caballus] Length = 178 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52 FM+ A AQ + N VGA V NKI+ N D TA Sbjct: 17 EYFMAVAFLSAQRSKDPNSQ-VGACIVNAENKIVGIGYNGMPNGCSDDLLPWRRTAENKL 75 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 76 DTKYPYVCHAELNAIMN----KNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIF 127 >gi|309359910|emb|CAP32039.2| hypothetical protein CBG_13218 [Caenorhabditis briggsae AF16] Length = 293 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 5/104 (4%) Query: 27 GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL-PEVDLYVTLEPCTM 85 G ++V N+ ++S HA + + + + L D+++ EPC M Sbjct: 167 GCISVQNDILLSSGS----PSTHPLGHAVMEMVGNLQKRTGSDYLGTGADVFLLNEPCAM 222 Query: 86 CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 C+ A+ RI+RL+Y S+ G ++G Q + + +H E+Y Sbjct: 223 CSMALVHFRIKRLFYVISSRNGVLKDDGWQLHLEPSINHHYEVY 266 >gi|294784089|ref|ZP_06749390.1| deoxycytidylate deaminase [Fusobacterium sp. 3_1_27] gi|294488159|gb|EFG35504.1| deoxycytidylate deaminase [Fusobacterium sp. 3_1_27] Length = 161 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 45/122 (36%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKD------- 49 + + FM A+ + + P VGA V +K I+ N + D Sbjct: 6 INWDSYFMGIAILSSMRSKD----PNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWE 61 Query: 50 ----------V-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ AI + S + L + +YV L PC C AI + I+ + Sbjct: 62 RDGEFLNTKYPYVCHAELNAI-----LNSIKSLKDCTIYVALFPCHECTKAIIQSGIKEI 116 Query: 99 YY 100 Y Sbjct: 117 VY 118 >gi|34762517|ref|ZP_00143514.1| Deoxycytidylate deaminase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237741327|ref|ZP_04571808.1| deoxycytidylate deaminase [Fusobacterium sp. 4_1_13] gi|256846472|ref|ZP_05551929.1| ComE operon protein 2 [Fusobacterium sp. 3_1_36A2] gi|27887795|gb|EAA24866.1| Deoxycytidylate deaminase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229430859|gb|EEO41071.1| deoxycytidylate deaminase [Fusobacterium sp. 4_1_13] gi|256718241|gb|EEU31797.1| ComE operon protein 2 [Fusobacterium sp. 3_1_36A2] Length = 161 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 45/122 (36%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKD------- 49 + + FM A+ + + P VGA V +K I+ N + D Sbjct: 6 INWDSYFMGIAILSSMRSKD----PNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWE 61 Query: 50 ----------V-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ AI + S + L + +YV L PC C AI + I+ + Sbjct: 62 RDGEFLNTKYPYVCHAELNAI-----LNSIKSLKDCTIYVALFPCHECTKAIIQSGIKEI 116 Query: 99 YY 100 Y Sbjct: 117 VY 118 >gi|325680467|ref|ZP_08160016.1| cytidine and deoxycytidylate deaminase zinc-binding region [Ruminococcus albus 8] gi|324107836|gb|EGC02103.1| cytidine and deoxycytidylate deaminase zinc-binding region [Ruminococcus albus 8] Length = 159 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 48/135 (35%), Gaps = 32/135 (23%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGNR----NRELKDV-- 50 + FM A A+ + P VGA V NKI+S N + Sbjct: 7 LSWDEYFMGIAHLSARRSKD----PNTQVGACIVSEENKILSVGYNGMPTGCNDDDMPWD 62 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ AI S L +YV+L PC CA AI + I+ + Sbjct: 63 REGEFLETKYPFVCHAELNAILN----RSTGSLKNAKIYVSLFPCNECAKAIIQSGIKEV 118 Query: 99 YYGASNPKGGGIENG 113 YG + K +N Sbjct: 119 IYG--DDKYADTDNV 131 >gi|196012527|ref|XP_002116126.1| hypothetical protein TRIADDRAFT_50803 [Trichoplax adhaerens] gi|190581449|gb|EDV21526.1| hypothetical protein TRIADDRAFT_50803 [Trichoplax adhaerens] Length = 157 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 31/123 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRN------------ 44 + FM+ A +Q + P VGA V NKI+ N Sbjct: 17 ISWEEYFMAVAFLSSQRSKD----PNTQVGACIVNQENKIVGIGYNGMPNGCNDDALPWA 72 Query: 45 RELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 RE + HAE+ AI + L +YV L PC CA I + I+ Sbjct: 73 REASNALDTKYPYVCHAEMNAILN----KNSFDLKGCIIYVALFPCNECAKLIIQSGIKE 128 Query: 98 LYY 100 + + Sbjct: 129 VVF 131 >gi|270292326|ref|ZP_06198537.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus sp. M143] gi|270278305|gb|EFA24151.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus sp. M143] Length = 155 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 41/117 (35%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGN--------------RN 44 F + AL A + A VGAV V +NK+IS N Sbjct: 9 DEYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 62 Query: 45 RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E V T HAE+ AI G + YVT PC C + +R+ Y Sbjct: 63 IEGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116 >gi|146319276|ref|YP_001198988.1| deoxycytidylate deaminase [Streptococcus suis 05ZYH33] gi|146321480|ref|YP_001201191.1| deoxycytidylate deaminase [Streptococcus suis 98HAH33] gi|145690082|gb|ABP90588.1| Deoxycytidylate deaminase [Streptococcus suis 05ZYH33] gi|145692286|gb|ABP92791.1| Deoxycytidylate deaminase [Streptococcus suis 98HAH33] gi|292558909|gb|ADE31910.1| Deoxycytidylate deaminase [Streptococcus suis GZ1] Length = 161 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 19/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---------------LK 48 F + AL A A + VGAV V +NK+I+ N + Sbjct: 15 DEYFAAQALLIANRATCKRAK-VGAVLVKDNKVIATGYNGSVSGTEHCLDQECLMIDGHC 73 Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI G + YVT PC C+ + +R+ Y Sbjct: 74 ARTLHAEVNAILQGAERGIPK---GFTAYVTHFPCLNCSKQLLQVGCKRVVY 122 >gi|315927631|gb|EFV06962.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 336 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 64/177 (36%), Gaps = 44/177 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55 MK +M+ AL EA P VG + + N KI++ +A K AHAE Sbjct: 11 MK--EFYMNLALNEAWK-YQFLTYPNPAVGCIILDKNEKILAIKAH-----EKAGLAHAE 62 Query: 56 ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89 + AI + L EI + +VTLEPC CA Sbjct: 63 LNAIAHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 122 Query: 90 ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 S ++++ + G +F E+ I ++ +++++ F K Sbjct: 123 FSELGFKKIFISVKDENKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLKPFLK 174 >gi|306825613|ref|ZP_07458952.1| cytidine and deoxycytidylate deaminase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|315612824|ref|ZP_07887735.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis ATCC 49296] gi|304431974|gb|EFM34951.1| cytidine and deoxycytidylate deaminase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|315314934|gb|EFU62975.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis ATCC 49296] Length = 155 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 40/117 (34%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGN--------------RN 44 F + AL A + A VGAV V +NK+IS N Sbjct: 9 DEYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 62 Query: 45 RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E V T HAE+ AI G YVT PC C + +R+ Y Sbjct: 63 IEGHCVRTLHAEVNAILQGAERGVP---RGFTAYVTHFPCLNCTKQLLQVGCKRVVY 116 >gi|294660212|ref|NP_852829.2| bifunctional dihydrofolate reductase/deoxycytidylate deaminase [Mycoplasma gallisepticum str. R(low)] gi|5565934|gb|AAD45277.1|AF152114_5 dihydrofolate reductase/deoxycytidylate deaminase fusion protein [Mycoplasma gallisepticum] gi|284811862|gb|AAP56397.2| Bifunctional protein including dihydrofolate reductase and deoxycytidylate deaminase family domains [Mycoplasma gallisepticum str. R(low)] gi|284930290|gb|ADC30229.1| Bifunctional protein including dihydrofolate reductase and deoxycytidylate deaminase family domains [Mycoplasma gallisepticum str. R(high)] gi|284931057|gb|ADC30995.1| Bifunctional protein including dihydrofolate reductase and deoxycytidylate deaminase family domains [Mycoplasma gallisepticum str. F] Length = 317 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 42/122 (34%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------R 43 + FM A A + P VGA V K +I N R Sbjct: 166 ISWDEYFMMLANVSAMRSKD----PSTQVGACIVNKKKYVIGLGYNGMPKGLDNIFPWDR 221 Query: 44 NRELKDVTA-----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + T HAEI AI + + ++ + LY L PC+ CA I + I + Sbjct: 222 TNQDSAKTKYPYVVHAEINAI-----LNTSTVIEDCTLYTNLFPCSNCAKTIVQSGIVEV 276 Query: 99 YY 100 Y Sbjct: 277 VY 278 >gi|124513702|ref|XP_001350207.1| cytidine and deoxycytidylate deaminase, putative [Plasmodium falciparum 3D7] gi|23615624|emb|CAD52616.1| cytidine and deoxycytidylate deaminase, putative [Plasmodium falciparum 3D7] Length = 232 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 12/84 (14%) Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT--LATCHHSPE 127 L + + VT EPC MC A+ L I+ +Y+ N + GG + + H E Sbjct: 140 NLKKCCIVVTCEPCIMCVYALKLIGIKNIYFCCLNERFGGCGSVLSLHKKYEDINVHYIE 199 Query: 128 IYPGISEQRSRQ----IIQDFFKE 147 + +++ F+K Sbjct: 200 ------HPECSEKSINLMKAFYKA 217 Score = 51.8 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Query: 7 FMSCALEEAQNAALRN--EIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRM 61 F++ AL EA+ + + E+P+ + + K IIS + N E K+ + H+E++AI Sbjct: 12 FLNIALGEAEKSLQKELKEMPIFCLLINEEKKIISSSYNYTNESKNGSRHSELIAIDK 69 >gi|307202968|gb|EFN82184.1| Deoxycytidylate deaminase [Harpegnathos saltator] Length = 181 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 42/120 (35%), Gaps = 31/120 (25%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR---------------N 44 FM+ A AQ + P VGA V +NKII N + Sbjct: 16 DEYFMAVAFLSAQRSKD----PYTQVGACIVNNDNKIIGIGYNGMPIGCSDDVFPWNKGS 71 Query: 45 RELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D HAE+ A+ + + +YV L PC CA I + IR + Y Sbjct: 72 YSSLDSKYLYVCHAEVNAVLN----KNSSDCKDCTIYVALFPCNECAKVIIQSGIRTVIY 127 >gi|149039572|gb|EDL93734.1| deaminase domain containing 1 (predicted) [Rattus norvegicus] Length = 91 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVT 51 ++ +M A+ A+ A E+PVG + V NN+++ + N + K+ Sbjct: 20 QETEKWMEEAMRMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNCI 69 >gi|223933157|ref|ZP_03625149.1| CMP/dCMP deaminase zinc-binding [Streptococcus suis 89/1591] gi|223898218|gb|EEF64587.1| CMP/dCMP deaminase zinc-binding [Streptococcus suis 89/1591] Length = 155 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 19/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---------------LK 48 F + AL A A + VGAV V +NK+I+ N + Sbjct: 9 DEYFAAQALLIANRATCKRAK-VGAVLVKDNKVIATGYNGSVSGTEHCLDQECLMVDGHC 67 Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI G + YVT PC C+ + +R+ Y Sbjct: 68 ARTLHAEVNAILQGAERGIPK---GFTAYVTHFPCLNCSKQLLQVGCKRVVY 116 >gi|331028070|ref|YP_004421784.1| deoxycytidylate deaminase [Roseobacter phage RDJL Phi 1] gi|301341533|gb|ADK73417.1| deoxycytidylate deaminase [Roseobacter phage RDJL Phi 1] Length = 154 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 38/119 (31%), Gaps = 33/119 (27%) Query: 2 KKGNVFMSCALEEAQ---NAALRNEIPVGAVAVLNNKIISRAGNRNRE--------LKDV 50 K FM A EA+ VGA V + R + D Sbjct: 8 KWDKRFMRLAC-EARTWVKGPDLG---VGACVVSPDN---RGFSLGYSGLPRGMKDTNDR 60 Query: 51 TA----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 HAE+ AI R + LY T PC+ CA AI A I+R+ Sbjct: 61 ITETEFKDHHMVHAELNAILNASRSVVGW-----TLYATTHPCSHCAGAIIQAGIKRVV 114 >gi|304317923|ref|YP_003853068.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779425|gb|ADL69984.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 147 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 30/99 (30%), Positives = 38/99 (38%), Gaps = 27/99 (27%) Query: 26 VGAVAVLNNKIISRAGN------------------------RNRELKDVTAHAEILAIRM 61 VGAV V + IIS N EL T HAE AI Sbjct: 27 VGAVIVKDKHIISTGYNGAPTGLKHCEEVGCMRENLNIPSGERHELCRGT-HAEQNAIIQ 85 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L+ + +YV+ PC+MCA I A I+R+ Y Sbjct: 86 AA--LNGVSTKDATIYVSASPCSMCAKMIINAGIKRVVY 122 >gi|151940847|gb|EDN59229.1| tRNA-specific adenosine deaminase subunit [Saccharomyces cerevisiae YJM789] gi|190405371|gb|EDV08638.1| tRNA-specific adenosine deaminase 3 [Saccharomyces cerevisiae RM11-1a] gi|259148298|emb|CAY81545.1| Tad3p [Saccharomyces cerevisiae EC1118] Length = 322 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 19/125 (15%) Query: 28 AVAV----LNNKIISR-AGNRNRELKDVTAHAEILAIRMGCRIL--------SQEILPEV 74 +V V +K+++ N L H+ ++ IR L + + + Sbjct: 188 SVFVDPSRKKDKVVAEDGRNCENSL--PIDHSVMVGIRAVGERLREGVDEDANSYLCLDY 245 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLATCHHSPEIYP 130 D+Y+T EPC+MC+ A+ +R+RR+ + + G + +G + + E + Sbjct: 246 DVYLTHEPCSMCSMALIHSRVRRVVFLTEMQRTGSLKLTSGDGYCMNDNKQLNSTYEAFQ 305 Query: 131 GISEQ 135 I E+ Sbjct: 306 WIGEE 310 >gi|90961656|ref|YP_535572.1| ComE operon protein 2 [Lactobacillus salivarius UCC118] gi|90820850|gb|ABD99489.1| ComE operon protein 2 [Lactobacillus salivarius UCC118] gi|300214461|gb|ADJ78877.1| ComE operon protein 2 [Lactobacillus salivarius CECT 5713] Length = 158 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 18/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-------------- 49 FM A+ + + + VGA+ V + ++I+ N D Sbjct: 9 NQYFMLQAVLLSLRSTCER-LSVGAILVRDKRVIAGGYNGAVSGDDHCIDVGCYVVDGHC 67 Query: 50 -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ + ++YVT PC C ++ A I+++YY Sbjct: 68 LRTIHAEMNAVLQCSKFGIPTD--GAEIYVTDFPCLQCTKSLLQAGIKKIYY 117 >gi|9755339|ref|NP_013420.2| Tad3p [Saccharomyces cerevisiae S288c] gi|23822264|sp|Q9URQ3|TAD3_YEAST RecName: Full=tRNA-specific adenosine deaminase subunit TAD3; AltName: Full=tRNA-specific adenosine-34 deaminase subunit TAD3 gi|6434059|emb|CAB60630.1| tRNA-specific adenosine-34 deaminase subunit Tad3p/ADAT3 [Saccharomyces cerevisiae] gi|285813730|tpg|DAA09626.1| TPA: Tad3p [Saccharomyces cerevisiae S288c] Length = 322 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 19/125 (15%) Query: 28 AVAV----LNNKIISR-AGNRNRELKDVTAHAEILAIRMGCRIL--------SQEILPEV 74 +V V +K+++ N L H+ ++ IR L + + + Sbjct: 188 SVFVDPSRKKDKVVAEDGRNCENSL--PIDHSVMVGIRAVGERLREGVDEDANSYLCLDY 245 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLATCHHSPEIYP 130 D+Y+T EPC+MC+ A+ +R+RR+ + + G + +G + + E + Sbjct: 246 DVYLTHEPCSMCSMALIHSRVRRVVFLTEMQRTGSLKLTSGDGYCMNDNKQLNSTYEAFQ 305 Query: 131 GISEQ 135 I E+ Sbjct: 306 WIGEE 310 >gi|1078080|pir||S53395 hypothetical protein YLR316c - yeast (Saccharomyces cerevisiae) Length = 299 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 19/125 (15%) Query: 28 AVAV----LNNKIISR-AGNRNRELKDVTAHAEILAIRMGCRIL--------SQEILPEV 74 +V V +K+++ N L H+ ++ IR L + + + Sbjct: 165 SVFVDPSRKKDKVVAEDGRNCENSL--PIDHSVMVGIRAVGERLREGVDEDANSYLCLDY 222 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLATCHHSPEIYP 130 D+Y+T EPC+MC+ A+ +R+RR+ + + G + +G + + E + Sbjct: 223 DVYLTHEPCSMCSMALIHSRVRRVVFLTEMQRTGSLKLTSGDGYCMNDNKQLNSTYEAFQ 282 Query: 131 GISEQ 135 I E+ Sbjct: 283 WIGEE 287 >gi|184155085|ref|YP_001843425.1| competence protein [Lactobacillus fermentum IFO 3956] gi|227514789|ref|ZP_03944838.1| competence protein ComEB [Lactobacillus fermentum ATCC 14931] gi|260663629|ref|ZP_05864518.1| ComE operon protein 2 [Lactobacillus fermentum 28-3-CHN] gi|183226429|dbj|BAG26945.1| competence protein [Lactobacillus fermentum IFO 3956] gi|227086837|gb|EEI22149.1| competence protein ComEB [Lactobacillus fermentum ATCC 14931] gi|260551855|gb|EEX24970.1| ComE operon protein 2 [Lactobacillus fermentum 28-3-CHN] Length = 159 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 45/119 (37%), Gaps = 22/119 (18%) Query: 1 MKK----GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---------- 46 MKK FM A A + + VGAV V + +II N Sbjct: 1 MKKRIDWDQYFMVQAALLASRSTCTR-LSVGAVLVRDKRIIGSGYNGAVAGDEHCIDVGC 59 Query: 47 -LKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L+D T HAE+ A+ + + +YVT PC C ++ A I ++ Y Sbjct: 60 YLRDGHCVRTIHAEMNALLQCAKFGTSTD--GAMVYVTDFPCLQCTKSLLQAGITQINY 116 >gi|227890744|ref|ZP_04008549.1| competence protein ComEB [Lactobacillus salivarius ATCC 11741] gi|301300424|ref|ZP_07206625.1| ComE operon protein 2 [Lactobacillus salivarius ACS-116-V-Col5a] gi|227867682|gb|EEJ75103.1| competence protein ComEB [Lactobacillus salivarius ATCC 11741] gi|300851967|gb|EFK79650.1| ComE operon protein 2 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 162 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 18/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-------------- 49 FM A+ + + + VGA+ V + ++I+ N D Sbjct: 13 NQYFMLQAVLLSLRSTCER-LSVGAILVRDKRVIAGGYNGAVSGDDHCIDVGCYVVDGHC 71 Query: 50 -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ + ++YVT PC C ++ A I+++YY Sbjct: 72 LRTIHAEMNAVLQCSKFGIPTD--GAEIYVTDFPCLQCTKSLLQAGIKKIYY 121 >gi|307565320|ref|ZP_07627813.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella amnii CRIS 21A-A] gi|307345989|gb|EFN91333.1| cytidine and deoxycytidylate deaminase zinc-binding region [Prevotella amnii CRIS 21A-A] Length = 145 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 15/107 (14%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT----AHA 54 ++ A A+N+ + VG + V N IIS N + +VT HA Sbjct: 12 YLRMARIWAENSYCQRRK-VGTLVVKNKMIISDGYNGTPSGFENVCEDSNNVTKPYVLHA 70 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E AI R + +YVT PC CA I A I+R+ Y Sbjct: 71 EANAITKLARSGNNS--EGATIYVTDAPCIECAKLIIQAGIKRIVYA 115 >gi|281354625|gb|EFB30209.1| hypothetical protein PANDA_001894 [Ailuropoda melanoleuca] Length = 182 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52 FM+ A AQ + N VGA V NKI+ N D TA Sbjct: 22 EYFMAVAFLSAQRSKDPNSQ-VGACIVNAENKIVGIGYNGMPNGCSDDLLPWRRTAESKL 80 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 81 DTKYPYVCHAELNAIMN----KNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIF 132 >gi|308813003|ref|XP_003083808.1| cytidine/deoxycytidylate deaminase family protein (ISS) [Ostreococcus tauri] gi|116055690|emb|CAL57775.1| cytidine/deoxycytidylate deaminase family protein (ISS) [Ostreococcus tauri] Length = 290 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 44/125 (35%), Gaps = 33/125 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------- 42 + + FMS A AQ + P VGA V +K I+ N Sbjct: 98 LSWDDYFMSVAFLSAQRSKD----PNKQVGACIVGEDKLILGVGYNGFPRGCADSALPWA 153 Query: 43 ------RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 E K HAE+ AI + + LYVT+ PC CA I A I Sbjct: 154 KKSTNGDELETKYPYVCHAEMNAIMN----KNSASVAGGTLYVTMYPCNECAKLIIQAGI 209 Query: 96 RRLYY 100 R + Y Sbjct: 210 REVVY 214 >gi|56963412|ref|YP_175143.1| late competence protein ComEB [Bacillus clausii KSM-K16] gi|56909655|dbj|BAD64182.1| late competence protein ComEB [Bacillus clausii KSM-K16] Length = 196 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ A+ + Sbjct: 28 VGATIVRDKRIIAGGYNGSVSGSDHCLDKGCYVVDNHCIRTVHAEVNALLQCAKFGVPT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 ++Y+T PC C ++ A I R+YY Sbjct: 87 -AGAEIYITHFPCIHCTKSLIQAGIARVYYA 116 >gi|154343275|ref|XP_001567583.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134064915|emb|CAM43024.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 539 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 3/69 (4%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 +D+YVT EPC MCA A+ +RI+R+++ N GG+ +++A+ +H Y Sbjct: 470 NGLDMYVTHEPCVMCAMALVHSRIQRVFFLFRNAVHGGLGGRYHVHSIASLNHHFRAYEC 529 Query: 132 ISEQRSRQI 140 + + Sbjct: 530 ---TEAAAL 535 >gi|218961643|ref|YP_001741418.1| cytidine/deoxycytidylate deaminase family protein [Candidatus Cloacamonas acidaminovorans] gi|167730300|emb|CAO81212.1| cytidine/deoxycytidylate deaminase family protein [Candidatus Cloacamonas acidaminovorans] Length = 157 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 45/127 (35%), Gaps = 30/127 (23%) Query: 5 NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNRELK 48 FM A ++ + R VGAV + +N+II+ N + K Sbjct: 8 QYFMEMAYLASKRSTCLRRK---VGAVLIRDNQIIATGYNGSPKGVPHCEDIGCLREQQK 64 Query: 49 DVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 + HAE AI S LY T +PC++CA I A I+ +Y Sbjct: 65 VPSGKNQELCRGVHAEQNAIIQAAINGSSTR--GAILYCTNQPCSICARLIINAEIKTVY 122 Query: 100 YGASNPK 106 P Sbjct: 123 IAEPYPD 129 >gi|312081040|ref|XP_003142857.1| hypothetical protein LOAG_07276 [Loa loa] gi|307761980|gb|EFO21214.1| hypothetical protein LOAG_07276 [Loa loa] Length = 269 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 31/58 (53%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 D+Y+T EPC MCA A+ R+ R++YG P GG E+ + + +H ++ Sbjct: 206 TGFDVYLTDEPCAMCAMALVHFRVGRVFYGKRTPSGGVYESCWRIQEEKSLNHHYAVF 263 >gi|16081448|ref|NP_393792.1| dCMP deaminase [Thermoplasma acidophilum DSM 1728] gi|10639455|emb|CAC11457.1| probable dCMP deaminase [Thermoplasma acidophilum] Length = 170 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 45/134 (33%), Gaps = 42/134 (31%) Query: 4 GNVFMSCALEEA-------QNAALRNEIPVGAVAVLNNKIISRAGNR------------- 43 FM A A + VGAV V + +++ N Sbjct: 10 DEYFMRMAYLAASRTNCIRRK--------VGAVIVKDRNVLATGYNGPPSGTAHCDVVGC 61 Query: 44 -NRELKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93 +LK + HAE AI + + + +YVT PC +C+ I A Sbjct: 62 IREDLKVPSGERHELCRGLHAEQNAIIQAA--VHGVSIKDSTIYVTTHPCVVCSKMIMNA 119 Query: 94 RIRRLYY--GASNP 105 +I+ + Y G + Sbjct: 120 QIKEIVYAEGYPDE 133 >gi|32455577|ref|NP_862060.1| putative deaminase [Streptomyces lividans] gi|28883228|gb|AAO61161.1| putative deaminase [Streptomyces lividans] gi|89357155|gb|ABD72321.1| pQC542.17 [Streptomyces lividans] Length = 155 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 42/113 (37%), Gaps = 14/113 (12%) Query: 2 KKGNVFMSCALEEAQNAA-LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59 + ++ A++ A VGAV V + ++ +R + HAE +A+ Sbjct: 7 DQDLRWIQRAIDLAALCPPAAGAYSVGAVIVSEDGTELATGYSRATGPHE---HAEEVAL 63 Query: 60 RMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNP 105 + L +Y TLEPC T CA + A I R+ P Sbjct: 64 AQLPQ--DDPRLAGATIYSTLEPCSQRRSPRTPCAQRVLAAGIPRVVIAWREP 114 >gi|154686818|ref|YP_001421979.1| hypothetical protein RBAM_023880 [Bacillus amyloliquefaciens FZB42] gi|308174347|ref|YP_003921052.1| DNA transport protein [Bacillus amyloliquefaciens DSM 7] gi|154352669|gb|ABS74748.1| ComEB [Bacillus amyloliquefaciens FZB42] gi|307607211|emb|CBI43582.1| putative enzyme associated to DNA transport (competence) [Bacillus amyloliquefaciens DSM 7] Length = 189 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 25/125 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRE----------- 46 + FM+ + A + P VGA V + ++I+ N + Sbjct: 4 ISWNQYFMAQSHLLALRSTC----PRLSVGATVVRDKRMIAGGYNGSIAGGVHCADEGCL 59 Query: 47 ----LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 T HAE+ AI + ++YVT PC C +I A I+ +YY A Sbjct: 60 LIDNHCQRTIHAEMNAILQCSKFGVPT--EGAEIYVTHYPCIQCCKSIIQAGIKTVYY-A 116 Query: 103 SNPKG 107 + K Sbjct: 117 EDYKT 121 >gi|120609786|ref|YP_969464.1| CMP/dCMP deaminase [Acidovorax citrulli AAC00-1] gi|120588250|gb|ABM31690.1| CMP/dCMP deaminase, zinc-binding protein [Acidovorax citrulli AAC00-1] Length = 119 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 5/68 (7%) Query: 37 ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96 ++ GN D HAE R IL L T EPC MCA I A I Sbjct: 2 LAEQGN-----IDTVNHAESTLAREAAARWPAGILRGCTLVTTFEPCAMCAGTIYWAGIG 56 Query: 97 RLYYGASN 104 R+ YGA Sbjct: 57 RVLYGAEE 64 >gi|328554294|gb|AEB24786.1| enzyme associated to DNA transport (competence) [Bacillus amyloliquefaciens TA208] gi|328912690|gb|AEB64286.1| ComE operon protein 2 [Bacillus amyloliquefaciens LL3] Length = 189 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 25/125 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRE----------- 46 + FM+ + A + P VGA V + ++I+ N + Sbjct: 4 ISWNQYFMAQSHLLALRSTC----PRLSVGATVVRDKRMIAGGYNGSIAGGVHCADEGCL 59 Query: 47 ----LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 T HAE+ AI + ++YVT PC C +I A I+ +YY A Sbjct: 60 LIDNHCQRTIHAEMNAILQCSKFGVPT--EGAEIYVTHYPCIQCCKSIIQAGIKTVYY-A 116 Query: 103 SNPKG 107 + K Sbjct: 117 EDYKT 121 >gi|313672555|ref|YP_004050666.1| cmp/dcmp deaminase zinc-binding protein [Calditerrivibrio nitroreducens DSM 19672] gi|312939311|gb|ADR18503.1| CMP/dCMP deaminase zinc-binding protein [Calditerrivibrio nitroreducens DSM 19672] Length = 149 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 27/99 (27%) Query: 26 VGAVAVLNNKIISRAGN------------------------RNRELKDVTAHAEILAIRM 61 VGAV V +N+I++ N + EL HAE AI Sbjct: 27 VGAVIVKDNRILATGYNGVPSKISHCSEKGCLRAKLNVPSGQRHELCRGL-HAEQNAIIQ 85 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + + + +Y +PC++C I A I+ + Y Sbjct: 86 ASKYGTP--IDGSTIYTNAKPCSICTKMIINAGIKEIVY 122 >gi|229495862|ref|ZP_04389588.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas endodontalis ATCC 35406] gi|229317175|gb|EEN83082.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas endodontalis ATCC 35406] Length = 146 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 14/88 (15%) Query: 26 VGAVAVLNNKIISRAGNRN-----RELKDVTA-------HAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N +D + HAE AI + Sbjct: 32 VGALIVKDQMIISDGYNGTPSGFENVCEDESGLTKPYVLHAEANAITKVACSGNNSD--G 89 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYG 101 +Y+T PC CA I ++I+R+ YG Sbjct: 90 ATIYITASPCVECAKLIIQSKIKRVVYG 117 >gi|296395033|ref|YP_003659917.1| riboflavin biosynthesis protein RibD [Segniliparus rotundus DSM 44985] gi|296182180|gb|ADG99086.1| riboflavin biosynthesis protein RibD [Segniliparus rotundus DSM 44985] Length = 343 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 28/158 (17%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 FM A+ ++ A R PVGAV V + +I+ R R + HAE++A+ Sbjct: 9 DEAFMREAIAVSRLARGRTSPNPPVGAVLVSPDGQIVGRGATRPPGQE----HAEVVALA 64 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP--KGGGIEN 112 E YVTLEPC CA A+ A + + +P + GG Sbjct: 65 QAG-----ERARGATAYVTLEPCNHVGRTGPCARALVDAGVAAVVCAVPDPNQRSGG--- 116 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQ-IIQDFFKERR 149 G + A + G+ +R ++++ +R Sbjct: 117 GAKTLEAAGVG----VRVGVLAHEARTGPLREWLHAQR 150 >gi|260943139|ref|XP_002615868.1| hypothetical protein CLUG_04750 [Clavispora lusitaniae ATCC 42720] gi|238851158|gb|EEQ40622.1| hypothetical protein CLUG_04750 [Clavispora lusitaniae ATCC 42720] Length = 315 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 42/123 (34%), Gaps = 30/123 (24%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGN---------------RNRE 46 FM A + A A N + VG V V +N++++ N R + Sbjct: 166 DAYFMRLA-DLA--ALRSNCMKRRVGCVIVKDNRVVATGYNGTPRHLTNCNEGGCSRCNQ 222 Query: 47 LKDVTA--------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + A HAE A+ R LY PC C+ I + IR++ Sbjct: 223 GQGSGAGLSTCLCLHAEENALLEAGRDRIAG--ENSILYCNTCPCLTCSIKIVQSGIRQV 280 Query: 99 YYG 101 Y Sbjct: 281 VYA 283 >gi|296876705|ref|ZP_06900753.1| deoxycytidylate deaminase [Streptococcus parasanguinis ATCC 15912] gi|296432207|gb|EFH18006.1| deoxycytidylate deaminase [Streptococcus parasanguinis ATCC 15912] Length = 160 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 40/112 (35%), Gaps = 19/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-------------- 49 F + AL + A VGAV V +NK+I+ N + D Sbjct: 14 DEYFAAQALLISNRATCNRAK-VGAVLVKDNKVIATGYNGSVSGTDHCLEDGCLMVEGHC 72 Query: 50 -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI G + YVT PC C + +R+ Y Sbjct: 73 VRTIHAEVNAILQGAERGIPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 121 >gi|30022404|ref|NP_834035.1| ComE operon protein 2 [Bacillus cereus ATCC 14579] gi|29897962|gb|AAP11236.1| ComE operon protein 2 [Bacillus cereus ATCC 14579] Length = 182 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + ++ Sbjct: 28 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 87 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 116 >gi|256851965|ref|ZP_05557352.1| ComE operon protein 2 [Lactobacillus jensenii 27-2-CHN] gi|260661465|ref|ZP_05862378.1| ComE operon protein 2 [Lactobacillus jensenii 115-3-CHN] gi|282931728|ref|ZP_06337216.1| ComE operon protein 2 [Lactobacillus jensenii 208-1] gi|297205164|ref|ZP_06922560.1| competence protein ComEB [Lactobacillus jensenii JV-V16] gi|256615377|gb|EEU20567.1| ComE operon protein 2 [Lactobacillus jensenii 27-2-CHN] gi|260547920|gb|EEX23897.1| ComE operon protein 2 [Lactobacillus jensenii 115-3-CHN] gi|281304171|gb|EFA96285.1| ComE operon protein 2 [Lactobacillus jensenii 208-1] gi|297149742|gb|EFH30039.1| competence protein ComEB [Lactobacillus jensenii JV-V16] Length = 160 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 18/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV--------- 50 FM AL +Q + + VG+V V + +II N + + DV Sbjct: 9 NQYFMMQALVISQRSTCNRAL-VGSVLVKDKRIIGTGYNGSVTGQEHCDDVGHQMVDGHC 67 Query: 51 --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H+E+ + C L + ++YVT PC C A+ A I+++ Y Sbjct: 68 IRTIHSEMNTLIQ-CAKNGVSTL-DTEIYVTHFPCYNCTKALIQAGIKKVNY 117 >gi|322389277|ref|ZP_08062837.1| cytidine and deoxycytidylate deaminase [Streptococcus parasanguinis ATCC 903] gi|321144021|gb|EFX39439.1| cytidine and deoxycytidylate deaminase [Streptococcus parasanguinis ATCC 903] Length = 160 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 40/112 (35%), Gaps = 19/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-------------- 49 F + AL + A VGAV V +NK+I+ N + D Sbjct: 14 DEYFAAQALLISNRATCNRAK-VGAVLVKDNKVIATGYNGSVSGTDHCLEDGCLMVEGHC 72 Query: 50 -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI G + YVT PC C + +R+ Y Sbjct: 73 VRTIHAEVNAILQGAERGIPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 121 >gi|155372299|ref|NP_001094762.1| deoxycytidylate deaminase [Bos taurus] gi|151555965|gb|AAI49762.1| DCTD protein [Bos taurus] gi|296472434|gb|DAA14549.1| dCMP deaminase [Bos taurus] Length = 178 Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 43/116 (37%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNR------------NRELKDVT 51 FM+ A AQ + N VGA V NKI+ N R +++ Sbjct: 17 EYFMAVAFLSAQRSKDPNSQ-VGACIVNAENKIVGIGYNGMPNGCSDDLLPWRRTAENIL 75 Query: 52 A-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 76 DTKYPYVCHAELNAIMN----KNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIF 127 >gi|313905030|ref|ZP_07838400.1| dCMP deaminase [Eubacterium cellulosolvens 6] gi|313470100|gb|EFR65432.1| dCMP deaminase [Eubacterium cellulosolvens 6] Length = 162 Score = 68.0 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 31/124 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR------------N 44 + FM A+ A +R++ P VG+ V +NKI+S N + Sbjct: 9 ISWDEYFM----AVARLAGMRSKDPNSQVGSCIVSPDNKILSIGYNGFPRGCSDEEFPWS 64 Query: 45 RELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 RE +D H+E+ AI L LYV+L PC CA AI A I+ Sbjct: 65 REDEDPLRTKYVYVTHSELNAILN----YRGGSLEGSKLYVSLFPCNECAKAIIQAGIKT 120 Query: 98 LYYG 101 + Y Sbjct: 121 VIYA 124 >gi|167760281|ref|ZP_02432408.1| hypothetical protein CLOSCI_02654 [Clostridium scindens ATCC 35704] gi|167662164|gb|EDS06294.1| hypothetical protein CLOSCI_02654 [Clostridium scindens ATCC 35704] Length = 164 Score = 68.0 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 53/155 (34%), Gaps = 36/155 (23%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR------------N 44 + FM A+ + P VG V +NKI+S N Sbjct: 11 ISWDEYFMGVAMLSGMRSKD----PNTQVGCCIVSQDNKILSMGYNGLPMGCSDDEFPWV 66 Query: 45 RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 RE D T H+E+ AI L LYV+L PC CA AI + I+ Sbjct: 67 REGDDPLETKYVYTVHSELNAILN----YRGGSLEGAKLYVSLFPCNECAKAIIQSGIKE 122 Query: 98 LYYGASN-PKGGGIENGTQFYTLATCH----HSPE 127 + Y + ++ + + A + H + Sbjct: 123 VIYDCNKYEDTSSVKASMRMFDAAGVNYHQYHRTQ 157 >gi|153956292|ref|YP_001397057.1| deaminase [Clostridium kluyveri DSM 555] gi|219856609|ref|YP_002473731.1| hypothetical protein CKR_3266 [Clostridium kluyveri NBRC 12016] gi|146349150|gb|EDK35686.1| Predicted deaminase [Clostridium kluyveri DSM 555] gi|219570333|dbj|BAH08317.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 141 Score = 68.0 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 44/120 (36%), Gaps = 28/120 (23%) Query: 1 MKKG--NVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGN---RNRELKD--- 49 M+K N F+ A + A+ + P VGAV V N +I N R E D Sbjct: 4 MRKDWDNYFIDIAFQVAERSTC----PRLHVGAVLVKNRRIKGTGYNGSPRGLEHCDEAG 59 Query: 50 ---------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ + + LYVT PC C I ++R+ Y Sbjct: 60 CYMKDNHCIRTIHAEVNCLLEVS----PDDRENSTLYVTHMPCPECQKLIINCGVKRVIY 115 >gi|297674743|ref|XP_002815371.1| PREDICTED: deoxycytidylate deaminase-like isoform 1 [Pongo abelii] gi|297674745|ref|XP_002815372.1| PREDICTED: deoxycytidylate deaminase-like isoform 2 [Pongo abelii] gi|297674747|ref|XP_002815373.1| PREDICTED: deoxycytidylate deaminase-like isoform 3 [Pongo abelii] gi|62286511|sp|Q5RC69|DCTD_PONAB RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP deaminase gi|55727775|emb|CAH90638.1| hypothetical protein [Pongo abelii] Length = 178 Score = 68.0 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNR------------NRELKDVT 51 FM+ A AQ + N VGA V NKI+ N R K+ Sbjct: 17 EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDQLPWRRTAKNKL 75 Query: 52 A-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 76 DTKYPYVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127 >gi|332244691|ref|XP_003271507.1| PREDICTED: deoxycytidylate deaminase-like isoform 2 [Nomascus leucogenys] gi|332244693|ref|XP_003271508.1| PREDICTED: deoxycytidylate deaminase-like isoform 3 [Nomascus leucogenys] gi|332244695|ref|XP_003271509.1| PREDICTED: deoxycytidylate deaminase-like isoform 4 [Nomascus leucogenys] Length = 178 Score = 68.0 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNR------------NRELKDVT 51 FM+ A AQ + N VGA V NKI+ N R K+ Sbjct: 17 EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDLLPWRRTAKNKL 75 Query: 52 A-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 76 DTKYPYVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127 >gi|330995533|ref|ZP_08319436.1| putative ComE operon protein 2 [Paraprevotella xylaniphila YIT 11841] gi|329575313|gb|EGG56858.1| putative ComE operon protein 2 [Paraprevotella xylaniphila YIT 11841] Length = 149 Score = 68.0 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 18/115 (15%) Query: 2 KKGNV---FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDV 50 KK + ++ A A+N+ VGA+ V + IIS N + + Sbjct: 7 KKHELDLRYLRMARIWAENSYCERRK-VGALIVKDKMIISDGYNGTPAGFENVCEDENHL 65 Query: 51 T----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE AI R + LYVT PC C+ I + I++++Y Sbjct: 66 TKPYVLHAEANAITKIARSGNNS--EGATLYVTDAPCIECSKLIIQSGIKKVFYA 118 >gi|317054801|ref|YP_004103268.1| dCMP deaminase [Ruminococcus albus 7] gi|315447070|gb|ADU20634.1| dCMP deaminase [Ruminococcus albus 7] Length = 159 Score = 68.0 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 46/128 (35%), Gaps = 32/128 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGNR----NRELKDV-- 50 + FM A A+ + P VGA V NKI+S N + Sbjct: 7 LSWDEYFMGIAHLSAKRSKD----PSTQVGACIVSEENKILSVGYNGMPTGCNDDDMPWE 62 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ AI S L +YV+L PC CA AI + I+ + Sbjct: 63 RDGDFLETKYPFVCHAELNAILN----RSTGSLKNARIYVSLFPCNECAKAIIQSGIKEV 118 Query: 99 YYGASNPK 106 YG + K Sbjct: 119 IYG--DDK 124 >gi|238855583|ref|ZP_04645885.1| ComE operon protein 2 [Lactobacillus jensenii 269-3] gi|260664775|ref|ZP_05865626.1| ComE operon protein 2 [Lactobacillus jensenii SJ-7A-US] gi|282932731|ref|ZP_06338139.1| ComE operon protein 2 [Lactobacillus jensenii 208-1] gi|313472663|ref|ZP_07813152.1| ComE operon protein 2 [Lactobacillus jensenii 1153] gi|238831800|gb|EEQ24135.1| ComE operon protein 2 [Lactobacillus jensenii 269-3] gi|239529376|gb|EEQ68377.1| ComE operon protein 2 [Lactobacillus jensenii 1153] gi|260561258|gb|EEX27231.1| ComE operon protein 2 [Lactobacillus jensenii SJ-7A-US] gi|281303141|gb|EFA95335.1| ComE operon protein 2 [Lactobacillus jensenii 208-1] Length = 160 Score = 68.0 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 18/111 (16%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV---------- 50 FM AL +Q + + VG+V V + +II N + + DV Sbjct: 10 QYFMMQALVISQRSTCNRAL-VGSVLVKDKRIIGTGYNGSVTGQAHCDDVGHQMVDGHCV 68 Query: 51 -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H+E+ + C L ++YVT PC C A+ A I+R+ Y Sbjct: 69 RTIHSEMNTLIQ-CAKNGVSTLN-TEIYVTHFPCYNCTKALIQAGIKRVNY 117 >gi|148925766|ref|ZP_01809454.1| putative riboflavin-specific deaminase [Campylobacter jejuni subsp. jejuni CG8486] gi|145845776|gb|EDK22867.1| putative riboflavin-specific deaminase [Campylobacter jejuni subsp. jejuni CG8486] Length = 336 Score = 68.0 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 64/177 (36%), Gaps = 44/177 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55 MK +M+ AL EA P VG V + N KI++ +A K AHAE Sbjct: 11 MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNEKILAIKAH-----EKAGLAHAE 62 Query: 56 ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89 + AI + L EI + +VTLEPC CA Sbjct: 63 LNAIAHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 122 Query: 90 ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146 S ++++ + G +F E+ I ++ +++++ F K Sbjct: 123 FSELGFKKIFISVKDGNKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLKPFLK 174 >gi|305665639|ref|YP_003861926.1| deoxycytidylate deaminase [Maribacter sp. HTCC2170] gi|88710395|gb|EAR02627.1| deoxycytidylate deaminase [Maribacter sp. HTCC2170] Length = 147 Score = 68.0 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 51/152 (33%), Gaps = 31/152 (20%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA--------- 52 K ++ A E + + + VGA+ V + IIS N T Sbjct: 8 KYDKAYLRMAQEWGKLSFCERKQ-VGAIVVKDRMIISDGYNGT-----PTGFENVCEDEE 61 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 HAE AI LY+TL PC C+ I + I+R+ Y Sbjct: 62 GYTKWYVLHAEANAISKVASSTQS--CEGATLYITLSPCRECSKLIHQSGIKRVVY---- 115 Query: 105 PKGGGIENGTQFYTLAT--CHHSPEIYPGISE 134 K +G +F A H P I + E Sbjct: 116 KKAYKDGSGLEFLEKAGVDLVHMPVIEESVVE 147 >gi|295102170|emb|CBK99715.1| Deoxycytidylate deaminase [Faecalibacterium prausnitzii L2-6] Length = 159 Score = 68.0 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 40/122 (32%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGNRN-----------R 45 + FM AL A + P VGA V NKI+S N Sbjct: 7 INWDEYFMGIALLTAMRSKD----PSSQVGACIVSPENKILSLGYNGMPIGCDDDAMPWE 62 Query: 46 ELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + HAE+ AI L +YVTL PC C AI + I + Sbjct: 63 REGEPLNTKYMYVCHAELNAILNSAHN----NLKGARVYVTLFPCNECTKAIIQSGIAEV 118 Query: 99 YY 100 Y Sbjct: 119 VY 120 >gi|332244689|ref|XP_003271506.1| PREDICTED: deoxycytidylate deaminase-like isoform 1 [Nomascus leucogenys] gi|332244697|ref|XP_003271510.1| PREDICTED: deoxycytidylate deaminase-like isoform 5 [Nomascus leucogenys] Length = 189 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNR------------NRELKDVT 51 FM+ A AQ + N VGA V NKI+ N R K+ Sbjct: 28 EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDLLPWRRTAKNKL 86 Query: 52 A-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 87 DTKYPYVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 138 >gi|307720625|ref|YP_003891765.1| riboflavin biosynthesis protein RibD [Sulfurimonas autotrophica DSM 16294] gi|306978718|gb|ADN08753.1| riboflavin biosynthesis protein RibD [Sulfurimonas autotrophica DSM 16294] Length = 339 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 63/181 (34%), Gaps = 46/181 (25%) Query: 1 MK-KGNVFMSCALEEAQN--AALRNEIPVGAVAVLN-NKIIS-RAGNRNRELKDVTAHAE 55 M+ N +M+ A+ EA VG V ++++ A ++ E HAE Sbjct: 1 MEIDHNFYMNLAISEAWKYQGLTYANPAVGCSIVGEHGELLAVEAHHKAGEP-----HAE 55 Query: 56 ILAIRMGCRIL----------------------SQEILPEVDLYVTLEPC------TMCA 87 + AI+ L I + LY TLEPC CA Sbjct: 56 VNAIKAAYYKLTQDEKILQLISSSQIHIYLLQNHNNIFKKCSLYSTLEPCSHVGKTPSCA 115 Query: 88 AAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF-FK 146 I+ I+ ++ G + NG + + I + +Q+ ++ F FK Sbjct: 116 NLIAELGIKNVFVGVEDFNTDAA-NGNTVLEKSGAN----ISLHVEQQKCEDLL--FPFK 168 Query: 147 E 147 + Sbjct: 169 K 169 >gi|156554302|ref|XP_001602407.1| PREDICTED: similar to deoxycytidylate deaminase [Nasonia vitripennis] Length = 206 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 44/120 (36%), Gaps = 31/120 (25%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN---------------RN 44 + FMS A + + P VGA V +K I+ N + Sbjct: 36 DDYFMSVAFLASMRSKD----PCTQVGACIVNEDKKIVGVGYNGMPIGCNDDDFSWKKAH 91 Query: 45 RELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D HAE+ AI + E + LYV L PC CA I + I+R+YY Sbjct: 92 ESELDSKFLYVCHAELNAILN----KNSENVKNCTLYVGLFPCNECAKVIIQSGIKRVYY 147 >gi|262047267|ref|ZP_06020225.1| dCMP deaminase [Lactobacillus crispatus MV-3A-US] gi|260572512|gb|EEX29074.1| dCMP deaminase [Lactobacillus crispatus MV-3A-US] Length = 159 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 18/111 (16%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV---------- 50 FM AL AQ + + VG+V V NN+II N + + DV Sbjct: 9 QYFMMQALVIAQRSTCNRAL-VGSVLVKNNRIIGTGYNGSVSGQPHCDDVGHQMVDGHCV 67 Query: 51 -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H+E+ AI + ++YVT PC C ++ A ++++ Y Sbjct: 68 RTIHSEMNAIIQCAKFGVST--ENTEIYVTHFPCYNCCRSLLQAGVKKINY 116 >gi|134300992|ref|YP_001114488.1| CMP/dCMP deaminase [Desulfotomaculum reducens MI-1] gi|134053692|gb|ABO51663.1| CMP/dCMP deaminase, zinc-binding protein [Desulfotomaculum reducens MI-1] Length = 147 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 44/124 (35%), Gaps = 32/124 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN------------------- 42 FM A + R VGAV V +N+I++ N Sbjct: 6 DEYFMEITRVVATRSTCLRRK---VGAVIVKDNRILATGYNGAPAGLTHCLEIGCLREKL 62 Query: 43 -----RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 + EL HAE AI + + +YVT +PC MC+ I A I++ Sbjct: 63 GVPSGQRHELCRAL-HAEQNAIIQAA--VHGTAIQGSIIYVTDQPCVMCSKMIVNAGIKK 119 Query: 98 LYYG 101 + + Sbjct: 120 VIFA 123 >gi|198431901|ref|XP_002131408.1| PREDICTED: similar to dCMP deaminase [Ciona intestinalis] Length = 191 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 46/122 (37%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN-RNRELKD------ 49 ++ + FMS A AQ + P VGA V + NKI+ N D Sbjct: 28 LEWKDYFMSVAFLSAQRSKD----PSTQVGACIVNDENKIVGIGYNGMPNGCHDDELPWS 83 Query: 50 VTA-----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 T HAE+ AI + + ++V L PC CA I + I+ + Sbjct: 84 RTGDWLDTKYPYVCHAEMNAIMN----KNCSSVSGCRIFVALFPCNECAKLIIQSGIKEV 139 Query: 99 YY 100 +Y Sbjct: 140 FY 141 >gi|198412532|ref|XP_002130499.1| PREDICTED: similar to dCMP deaminase [Ciona intestinalis] Length = 191 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 46/122 (37%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN-RNRELKD------ 49 ++ + FMS A AQ + P VGA V + NKI+ N D Sbjct: 28 LEWKDYFMSVAFLSAQRSKD----PSTQVGACIVNDENKIVGIGYNGMPNGCHDDELSWS 83 Query: 50 VTA-----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 T HAE+ AI + + ++V L PC CA I + I+ + Sbjct: 84 RTGDWLDTKYPYVCHAEMNAIMN----KNCSSVSGCRIFVALFPCNECAKLIIQSGIKEV 139 Query: 99 YY 100 +Y Sbjct: 140 FY 141 >gi|17557019|ref|NP_498980.1| hypothetical protein ZK643.2 [Caenorhabditis elegans] gi|267457|sp|P30648|DCTD_CAEEL RecName: Full=Probable deoxycytidylate deaminase; AltName: Full=dCMP deaminase gi|3881681|emb|CAA77473.1| C. elegans protein ZK643.2, confirmed by transcript evidence [Caenorhabditis elegans] Length = 197 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 29/121 (23%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNR----------NRE 46 +KK F+ A + + P VG V V +N I+S N + Sbjct: 48 LKKHQRFLRIAKVTSLRSKD----PNTQVGCVIVDKDNCIVSVGYNGFPIGVDDDVFRWD 103 Query: 47 LKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 +D HAE+ AI + + L + +YVTL PC CA + +R++++Y Sbjct: 104 KEDPEDNKHLYVVHAEMNAIIN--KRCTT--LHDCTVYVTLFPCNKCAQMLIQSRVKKVY 159 Query: 100 Y 100 + Sbjct: 160 F 160 >gi|117924693|ref|YP_865310.1| CMP/dCMP deaminase, zinc-binding [Magnetococcus sp. MC-1] gi|117608449|gb|ABK43904.1| CMP/dCMP deaminase, zinc-binding protein [Magnetococcus sp. MC-1] Length = 167 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 25/127 (19%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN------------RNRELKDVT 51 +M A A+ + + VGAV V + ++++ N RE + Sbjct: 7 DIHWMRVAKLAAEMSTCASGRRVGAVFVRDKRLLATGFNGVPSGYPHPTSCARREAGVPS 66 Query: 52 ---------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY-- 100 AHAE I R + L +YVT PC C A++ ++ ++Y Sbjct: 67 GQGLGLCVCAHAEANGIANAGRHGIK--LEGCRVYVTTHPCGACMGALANIGVKEVFYAE 124 Query: 101 GASNPKG 107 +P+ Sbjct: 125 AYDDPRA 131 >gi|222099239|ref|YP_002533807.1| Deoxycytidylate deaminase [Thermotoga neapolitana DSM 4359] gi|221571629|gb|ACM22441.1| Deoxycytidylate deaminase [Thermotoga neapolitana DSM 4359] Length = 199 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 32/123 (26%) Query: 4 GNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNR-------NRELKDVTA- 52 + FM A ++ + + VGAV V +++I++ N+ E+ + Sbjct: 55 DSYFMRIARMVSERSTCFHRK----VGAVIVKDHRILATGYNQPPSKFPHCNEVGCIRDD 110 Query: 53 ---------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 HAE A+ + + +YVT +PC++CA + A I+R Sbjct: 111 LGINSGEHQEICYALHAEQNALMQAAKFGIA--VNGATIYVTHKPCSICARLLVNAGIKR 168 Query: 98 LYY 100 + Y Sbjct: 169 VVY 171 >gi|260886275|ref|ZP_05897538.1| putative deoxycytidylate deaminase [Selenomonas sputigena ATCC 35185] gi|330839740|ref|YP_004414320.1| dCMP deaminase [Selenomonas sputigena ATCC 35185] gi|260863994|gb|EEX78494.1| putative deoxycytidylate deaminase [Selenomonas sputigena ATCC 35185] gi|329747504|gb|AEC00861.1| dCMP deaminase [Selenomonas sputigena ATCC 35185] Length = 163 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 38/122 (31%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-RNRELKDV----- 50 + FM AL + P VGA V +K I+ N D Sbjct: 3 ISWDEYFMGIALFSKYRSKD----PHTQVGACIVNEDKHIVGVGYNGMPNGCSDAEFPWG 58 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ AI L +Y +L PC C AI + I+ + Sbjct: 59 STGEFGDKKYAYVVHAELNAILNA-----STSLKGCRIYTSLFPCNECCKAIIQSGIKEV 113 Query: 99 YY 100 Y Sbjct: 114 IY 115 >gi|126331283|ref|XP_001370213.1| PREDICTED: similar to Dctd protein [Monodelphis domestica] Length = 345 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52 FM+ A AQ + N VGA V NKI+ N D TA Sbjct: 185 EYFMAVAFLSAQRSKDPNSQ-VGACIVNAENKIVGIGYNGMPNGCSDDLLPWSRTAEKKL 243 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 244 DTKYPYVCHAELNAIMN----KNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIF 295 >gi|163800337|ref|ZP_02194238.1| deoxycytidylate deaminase [Vibrio sp. AND4] gi|159175780|gb|EDP60574.1| deoxycytidylate deaminase [Vibrio sp. AND4] Length = 152 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N T HAE AI + S+ L Sbjct: 27 VGAVITKQNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I I R+ Sbjct: 82 GCEIWVTHFPCPNCAAKIIQTGISRV 107 >gi|315928823|gb|EFV08089.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp. jejuni 305] Length = 335 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 62/173 (35%), Gaps = 44/173 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55 MK +M+ AL EA P VG V + N KI++ +A K AHAE Sbjct: 11 MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNEKILAIKAH-----EKAGLAHAE 62 Query: 56 ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89 + AI + L EI + +VTLEPC CA Sbjct: 63 LNAIAHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 122 Query: 90 ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142 S ++++ + G +F E+ I ++ +++++ Sbjct: 123 FSELGFKKIFISVKDENKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLK 170 >gi|209732624|gb|ACI67181.1| Deoxycytidylate deaminase [Salmo salar] Length = 195 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 41/119 (34%), Gaps = 31/119 (26%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN------------------ 42 FM+ A AQ + P VGA V NKI+ N Sbjct: 34 EYFMAVAFLSAQRSKD----PSSQVGACIVNQENKIVGIGYNGMPNGCDDDLLPWARSAD 89 Query: 43 RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + K HAE+ AI + + +YV L PC CA I A I+ + Y Sbjct: 90 DRLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKDVVY 144 >gi|218135381|ref|ZP_03464185.1| hypothetical protein BACPEC_03286 [Bacteroides pectinophilus ATCC 43243] gi|217990766|gb|EEC56777.1| hypothetical protein BACPEC_03286 [Bacteroides pectinophilus ATCC 43243] Length = 161 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 40/162 (24%), Positives = 53/162 (32%), Gaps = 43/162 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-RNR---------- 45 + FM A+ + P VGA V +NKI+S N R Sbjct: 9 ISWDEYFMGVAMLSGMRSKD----PNTQVGACIVSKDNKILSMGYNGLPRGCSDDEFPWC 64 Query: 46 ELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 D TAH+E+ AI L +YVTL PC CA AI A I + Sbjct: 65 REGDPLDNKYIYTAHSELNAILN----YRGGSLENAKIYVTLFPCNECAKAIIQAGITTV 120 Query: 99 YYGASNPKGGGIEN-----------GTQFYTLATCHHSPEIY 129 Y + K + G ++Y EI Sbjct: 121 VY--DDDKYATSASVIASKRMFDAAGVRYYRYQRTGRKIEIT 160 >gi|194044048|ref|XP_001925118.1| PREDICTED: deoxycytidylate deaminase-like [Sus scrofa] Length = 178 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 43/116 (37%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNR------------NRELKDVT 51 FM+ A AQ + N VGA V NKI+ N R +++ Sbjct: 17 EYFMAVAFLSAQRSKDPNSQ-VGACIVNAENKIVGIGYNGMPNGCSDDLLPWRRTAENIL 75 Query: 52 A-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 76 DTKYPYVCHAELNAIMN----KNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIF 127 >gi|37676740|ref|NP_937136.1| deoxycytidylate deaminase [Vibrio vulnificus YJ016] gi|37201283|dbj|BAC97106.1| deoxycytidylate deaminase [Vibrio vulnificus YJ016] Length = 152 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N T HAE AI + S+ L Sbjct: 27 VGAVITKQNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I I R+ Sbjct: 82 GCEIWVTHFPCPNCAAKIIQTGISRV 107 >gi|84515381|ref|ZP_01002743.1| riboflavin biosynthesis protein RibD [Loktanella vestfoldensis SKA53] gi|84510664|gb|EAQ07119.1| riboflavin biosynthesis protein RibD [Loktanella vestfoldensis SKA53] Length = 359 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 50/145 (34%), Gaps = 21/145 (14%) Query: 3 KGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ AL+ + R VG V V + +I+ R HAE +A+ Sbjct: 2 TDARYMALALQLGRRGMGRVWPNPAVGCVIVNHGRIVGRGW----TQDGGRPHAETVALA 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 +YVTLEPC CAAA+ A + R+ +P G Sbjct: 58 QAG-----PDACGATVYVTLEPCAHHGQTPPCAAALIAAGVARVVVALGDPDARVAGRGI 112 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139 A + G+ ++R Sbjct: 113 ALLEQAG----IAVETGLLADQARA 133 >gi|315174005|gb|EFU18022.1| ComE operon protein 2 [Enterococcus faecalis TX1346] Length = 167 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + T HAE+ AI + Sbjct: 28 VGATIVRDKRIIAGGYNGSVSGGTHCIDEGCYVVDNHCVRTIHAEMNAILQCAKFGVPT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++YVT PC C I A I+++YY Sbjct: 87 -EGAEIYVTHFPCLQCTKMILQAGIKKIYY 115 >gi|228477298|ref|ZP_04061936.1| ComE operon protein 2 [Streptococcus salivarius SK126] gi|228251317|gb|EEK10488.1| ComE operon protein 2 [Streptococcus salivarius SK126] Length = 151 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 45/122 (36%), Gaps = 18/122 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V + +II+ N D T HAE+ A+ + Sbjct: 29 VGAVLVKDKRIIATGYNGGVSETDNCNEVGHYMEDGHCIRTVHAEMNALIQCAKEGIST- 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY-GASNPKGGGIENGTQFYTLATCHHSPEIY 129 ++YVT PC C A+ A I ++ Y P IE Q H PE++ Sbjct: 88 -KNTEIYVTHFPCINCTKALLQAGIVKITYKANYRPHPFAIELMEQKGVSYLQHDVPEVH 146 Query: 130 PG 131 G Sbjct: 147 LG 148 >gi|158321591|ref|YP_001514098.1| CMP/dCMP deaminase zinc-binding [Alkaliphilus oremlandii OhILAs] gi|158141790|gb|ABW20102.1| CMP/dCMP deaminase zinc-binding [Alkaliphilus oremlandii OhILAs] Length = 145 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 30/122 (24%) Query: 4 GNVFMSCA-LEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------------------- 42 FM A + + ++ LR + VGAV V + ++++ N Sbjct: 6 DEYFMEMAEIVKTRSTCLRRQ--VGAVVVKDRRVLASGYNGAPTGLKHCEETGCLRDRLG 63 Query: 43 ----RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + EL HAE AI L L + +YVT +PC +CA + A I ++ Sbjct: 64 IPSGQRHELCRGL-HAEQNAIIQAS--LHGVKLEDATIYVTHQPCIICAKMVINAGINKV 120 Query: 99 YY 100 + Sbjct: 121 VF 122 >gi|189502659|ref|YP_001958376.1| hypothetical protein Aasi_1340 [Candidatus Amoebophilus asiaticus 5a2] gi|189498100|gb|ACE06647.1| hypothetical protein Aasi_1340 [Candidatus Amoebophilus asiaticus 5a2] Length = 160 Score = 67.6 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 29/120 (24%) Query: 4 GNVFMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGN------------------ 42 ++F+ AL+ A+ + L+ VGAV + +IIS N Sbjct: 7 DDIFIQLALQLAKRSHCVKLQ----VGAVLAKDTRIISIGYNGPPSGTYNCDEQWPGIGC 62 Query: 43 --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + + HAE AI + + LY+TL PC CA I I+R+ Y Sbjct: 63 PRDVKGGCSLAIHAEQNAILYALSNQAA--VTGATLYITLSPCLPCARIIFTVGIKRVVY 120 >gi|157104304|ref|XP_001648345.1| deoxycytidylate deaminase [Aedes aegypti] gi|108869217|gb|EAT33442.1| deoxycytidylate deaminase [Aedes aegypti] Length = 197 Score = 67.6 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 41/120 (34%), Gaps = 31/120 (25%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNN-KIISRAGNR------------NREL 47 FM+ A A+ + P VGA V KI+ N + Sbjct: 25 NEYFMATAFLAARRSKD----PNTQVGACIVNEERKIVGVGYNGFPLGCSDDEFPWGKAS 80 Query: 48 KDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D HAE+ AI + + +YV L PC CA I ++I+ + Y Sbjct: 81 LDPLGTKYLYVCHAEMNAILN----KNSSDVKNCTMYVALFPCNECAKIIIQSKIKEVIY 136 >gi|313675037|ref|YP_004053033.1| cmp/dcmp deaminase zinc-binding protein [Marivirga tractuosa DSM 4126] gi|312941735|gb|ADR20925.1| CMP/dCMP deaminase zinc-binding protein [Marivirga tractuosa DSM 4126] Length = 160 Score = 67.6 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 38/158 (24%), Positives = 55/158 (34%), Gaps = 26/158 (16%) Query: 1 MKK---GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV------ 50 M+K ++FM A+ A+ + VGAV +IIS N + Sbjct: 1 MEKPQFDDIFMELAVNLAKRSHCIKRH-VGAVLTKETRIISIGYNGPPAGTHNCDEEFPG 59 Query: 51 -------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 HAE AI + + + LYVTL PC CA I I++ Sbjct: 60 KGCGLDSKGSCMLAIHAEQNAIMYA--VKNNASVENSTLYVTLSPCLSCARIIFSMGIKK 117 Query: 98 LYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 + Y S + G++ L E Y G E Sbjct: 118 VIYLNSYAEYKGLDRDEGLDFLEKFGVEVEKYRGNLEN 155 >gi|73979520|ref|XP_849027.1| PREDICTED: similar to Deoxycytidylate deaminase (dCMP deaminase) isoform 1 [Canis familiaris] Length = 178 Score = 67.6 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52 FM+ A AQ + N VGA V NKI+ N D TA Sbjct: 17 EYFMAVAFLAAQRSKDPNSQ-VGACIVNAENKIVGIGYNGMPNGCSDDHLPWERTAASKL 75 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 76 DTKYPYVCHAELNAIMN----KNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIF 127 >gi|322494303|emb|CBZ29602.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 547 Score = 67.6 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 +DLYVT EPC MCA A+ +RI+R+++ N GG+ + +A+ +H Y Sbjct: 473 NGLDLYVTHEPCVMCAMALVHSRIQRVFFLFRNAVHGGLGGRYHVHVMASLNHHFSAYEC 532 Query: 132 ISEQRSRQI 140 + ++ Sbjct: 533 ---TEAAEL 538 >gi|225714908|gb|ACO13300.1| Deoxycytidylate deaminase [Esox lucius] Length = 201 Score = 67.6 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 41/119 (34%), Gaps = 31/119 (26%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN------------------ 42 FM+ A AQ + P VGA V NKI+ N Sbjct: 34 EYFMAVAFLPAQRSKD----PSSQVGACIVNPENKIVGIGYNGMPNGCDDDLLPWSRYAD 89 Query: 43 RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + K HAE+ AI + + +YV L PC CA I A I+ + Y Sbjct: 90 DRLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIY 144 >gi|167628994|ref|YP_001679493.1| come operon protein 2 [Heliobacterium modesticaldum Ice1] gi|167591734|gb|ABZ83482.1| come operon protein 2 [Heliobacterium modesticaldum Ice1] Length = 146 Score = 67.6 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 44/121 (36%), Gaps = 28/121 (23%) Query: 1 MKKG--NVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRN----------- 44 M+K + F+ A + + P VGAV V + +I N + Sbjct: 1 MRKDWDSYFIDIAFAVSSRSTC----PRRSVGAVIVKDKRIKGTGYNGSPAGLPHCTDAG 56 Query: 45 ----RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI S E +YVT PC CA I + IRR+ + Sbjct: 57 CCMWNNHCVRTIHAEVNAIME----CSPEERKGATIYVTDRPCAECAKVIISSGIRRVVF 112 Query: 101 G 101 Sbjct: 113 A 113 >gi|146298293|ref|YP_001192884.1| CMP/dCMP deaminase, zinc-binding [Flavobacterium johnsoniae UW101] gi|146152711|gb|ABQ03565.1| CMP/dCMP deaminase, zinc-binding [Flavobacterium johnsoniae UW101] Length = 143 Score = 67.6 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 47/125 (37%), Gaps = 27/125 (21%) Query: 26 VGAVAVLNNKIISRAGNRN--------RELKDVTA----HAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N + +T HAE AI R Sbjct: 31 VGAIIVKDRMIISDGYNGTPSGFENCCEDEDGLTRWDVLHAEANAILKVARSTQS--CEG 88 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKGGGIENGTQFYTLATCHHSPEIYP- 130 LY+TL PC C+ I + I+R+ Y G + +G QF A E+ Sbjct: 89 ATLYITLSPCKECSKLIHQSGIKRVVYKDGYRDD------SGIQFLIKAG----VEVEHI 138 Query: 131 GISEQ 135 + E+ Sbjct: 139 PVLEE 143 >gi|228941493|ref|ZP_04104043.1| ComE operon protein 2 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974423|ref|ZP_04134991.1| ComE operon protein 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981018|ref|ZP_04141320.1| ComE operon protein 2 [Bacillus thuringiensis Bt407] gi|228778678|gb|EEM26943.1| ComE operon protein 2 [Bacillus thuringiensis Bt407] gi|228785259|gb|EEM33270.1| ComE operon protein 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818143|gb|EEM64218.1| ComE operon protein 2 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 188 Score = 67.6 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + ++ Sbjct: 31 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 90 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119 >gi|62901894|gb|AAY18898.1| deoxycytidylate deaminase [synthetic construct] Length = 202 Score = 67.6 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52 FM+ A AQ + N VGA V NKI+ N D TA Sbjct: 41 EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKL 99 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 100 DTKYPYVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 151 >gi|260890091|ref|ZP_05901354.1| hypothetical protein GCWU000323_01253 [Leptotrichia hofstadii F0254] gi|260860114|gb|EEX74614.1| putative deoxycytidylate deaminase [Leptotrichia hofstadii F0254] Length = 161 Score = 67.6 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 44/122 (36%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------- 42 + FM A + P VGA + +K II N Sbjct: 8 LSWDEYFMGIAFLSGMRSKD----PSTQVGACIIDEDKKIIGIGYNGFPMGSSDDSMPWG 63 Query: 43 ---RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 E K HAE+ AI + S + L + +YVT PC CA AI + I+++ Sbjct: 64 KEGEFLETKYPYVVHAELNAI-----LNSIKSLKKCTIYVTHFPCNECAKAIVQSGIKKV 118 Query: 99 YY 100 Y Sbjct: 119 IY 120 >gi|294656404|ref|XP_458666.2| DEHA2D04598p [Debaryomyces hansenii CBS767] gi|199431447|emb|CAG86805.2| DEHA2D04598p [Debaryomyces hansenii] Length = 354 Score = 67.6 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 43/125 (34%), Gaps = 30/125 (24%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGN---------------RNRE 46 + FM A + A A N + VG V V N++++ N R + Sbjct: 201 DSYFMRLA-DLA--ALRSNCMKRRVGCVVVRGNRVMATGYNGTPRNLTNCNEGGCSRCNQ 257 Query: 47 LKDVTA--------HAEILAIRMGCR--ILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96 + A HAE A+ R I + LY PC C+ I + I+ Sbjct: 258 GQGSGAALSTCLCLHAEENALLEAGRDRITGGQTGENSVLYCNTCPCLTCSIKIVQSGIK 317 Query: 97 RLYYG 101 + Y Sbjct: 318 EVVYA 322 >gi|29376942|ref|NP_816096.1| comE operon protein 2, putative [Enterococcus faecalis V583] gi|227519834|ref|ZP_03949883.1| competence protein ComEB [Enterococcus faecalis TX0104] gi|227553981|ref|ZP_03984028.1| competence protein ComEB [Enterococcus faecalis HH22] gi|229545131|ref|ZP_04433856.1| competence protein ComEB [Enterococcus faecalis TX1322] gi|229549379|ref|ZP_04438104.1| competence protein ComEB [Enterococcus faecalis ATCC 29200] gi|255972085|ref|ZP_05422671.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T1] gi|255975152|ref|ZP_05425738.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T2] gi|256763140|ref|ZP_05503720.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T3] gi|256853808|ref|ZP_05559173.1| late competence protein ComEB [Enterococcus faecalis T8] gi|256956725|ref|ZP_05560896.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis DS5] gi|256961258|ref|ZP_05565429.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Merz96] gi|256963615|ref|ZP_05567786.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis HIP11704] gi|257079679|ref|ZP_05574040.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis JH1] gi|257081974|ref|ZP_05576335.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis E1Sol] gi|257084526|ref|ZP_05578887.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Fly1] gi|257090637|ref|ZP_05584998.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis CH188] gi|257416685|ref|ZP_05593679.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis AR01/DG] gi|257419901|ref|ZP_05596895.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T11] gi|257421911|ref|ZP_05598901.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis X98] gi|293383542|ref|ZP_06629452.1| ComE operon protein 2 [Enterococcus faecalis R712] gi|293387345|ref|ZP_06631901.1| ComE operon protein 2 [Enterococcus faecalis S613] gi|294780837|ref|ZP_06746192.1| ComE operon protein 2 [Enterococcus faecalis PC1.1] gi|300860396|ref|ZP_07106483.1| ComE operon protein 2 [Enterococcus faecalis TUSoD Ef11] gi|307270792|ref|ZP_07552082.1| ComE operon protein 2 [Enterococcus faecalis TX4248] gi|307271556|ref|ZP_07552828.1| ComE operon protein 2 [Enterococcus faecalis TX0855] gi|307285769|ref|ZP_07565903.1| ComE operon protein 2 [Enterococcus faecalis TX0860] gi|307287672|ref|ZP_07567715.1| ComE operon protein 2 [Enterococcus faecalis TX0109] gi|307290498|ref|ZP_07570411.1| ComE operon protein 2 [Enterococcus faecalis TX0411] gi|312899878|ref|ZP_07759196.1| ComE operon protein 2 [Enterococcus faecalis TX0470] gi|312905172|ref|ZP_07764293.1| ComE operon protein 2 [Enterococcus faecalis TX0635] gi|312906092|ref|ZP_07765104.1| ComE operon protein 2 [Enterococcus faecalis DAPTO 512] gi|312909438|ref|ZP_07768293.1| ComE operon protein 2 [Enterococcus faecalis DAPTO 516] gi|312953529|ref|ZP_07772367.1| ComE operon protein 2 [Enterococcus faecalis TX0102] gi|29344407|gb|AAO82166.1| comE operon protein 2, putative [Enterococcus faecalis V583] gi|227072724|gb|EEI10687.1| competence protein ComEB [Enterococcus faecalis TX0104] gi|227176884|gb|EEI57856.1| competence protein ComEB [Enterococcus faecalis HH22] gi|229305616|gb|EEN71612.1| competence protein ComEB [Enterococcus faecalis ATCC 29200] gi|229309676|gb|EEN75663.1| competence protein ComEB [Enterococcus faecalis TX1322] gi|255963103|gb|EET95579.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T1] gi|255968024|gb|EET98646.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T2] gi|256684391|gb|EEU24086.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T3] gi|256710751|gb|EEU25794.1| late competence protein ComEB [Enterococcus faecalis T8] gi|256947221|gb|EEU63853.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis DS5] gi|256951754|gb|EEU68386.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Merz96] gi|256954111|gb|EEU70743.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis HIP11704] gi|256987709|gb|EEU75011.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis JH1] gi|256990004|gb|EEU77306.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis E1Sol] gi|256992556|gb|EEU79858.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Fly1] gi|256999449|gb|EEU85969.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis CH188] gi|257158513|gb|EEU88473.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ARO1/DG] gi|257161729|gb|EEU91689.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T11] gi|257163735|gb|EEU93695.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis X98] gi|291079054|gb|EFE16418.1| ComE operon protein 2 [Enterococcus faecalis R712] gi|291083243|gb|EFE20206.1| ComE operon protein 2 [Enterococcus faecalis S613] gi|294452082|gb|EFG20529.1| ComE operon protein 2 [Enterococcus faecalis PC1.1] gi|295113494|emb|CBL32131.1| ComE operon protein 2 [Enterococcus sp. 7L76] gi|300849435|gb|EFK77185.1| ComE operon protein 2 [Enterococcus faecalis TUSoD Ef11] gi|306498445|gb|EFM67949.1| ComE operon protein 2 [Enterococcus faecalis TX0411] gi|306501410|gb|EFM70713.1| ComE operon protein 2 [Enterococcus faecalis TX0109] gi|306502530|gb|EFM71797.1| ComE operon protein 2 [Enterococcus faecalis TX0860] gi|306511828|gb|EFM80826.1| ComE operon protein 2 [Enterococcus faecalis TX0855] gi|306512906|gb|EFM81548.1| ComE operon protein 2 [Enterococcus faecalis TX4248] gi|310627738|gb|EFQ11021.1| ComE operon protein 2 [Enterococcus faecalis DAPTO 512] gi|310628541|gb|EFQ11824.1| ComE operon protein 2 [Enterococcus faecalis TX0102] gi|310631562|gb|EFQ14845.1| ComE operon protein 2 [Enterococcus faecalis TX0635] gi|311290111|gb|EFQ68667.1| ComE operon protein 2 [Enterococcus faecalis DAPTO 516] gi|311292874|gb|EFQ71430.1| ComE operon protein 2 [Enterococcus faecalis TX0470] gi|315030173|gb|EFT42105.1| ComE operon protein 2 [Enterococcus faecalis TX4000] gi|315032942|gb|EFT44874.1| ComE operon protein 2 [Enterococcus faecalis TX0017] gi|315035754|gb|EFT47686.1| ComE operon protein 2 [Enterococcus faecalis TX0027] gi|315144858|gb|EFT88874.1| ComE operon protein 2 [Enterococcus faecalis TX2141] gi|315146725|gb|EFT90741.1| ComE operon protein 2 [Enterococcus faecalis TX4244] gi|315150113|gb|EFT94129.1| ComE operon protein 2 [Enterococcus faecalis TX0012] gi|315152019|gb|EFT96035.1| ComE operon protein 2 [Enterococcus faecalis TX0031] gi|315155382|gb|EFT99398.1| ComE operon protein 2 [Enterococcus faecalis TX0043] gi|315159042|gb|EFU03059.1| ComE operon protein 2 [Enterococcus faecalis TX0312] gi|315161635|gb|EFU05652.1| ComE operon protein 2 [Enterococcus faecalis TX0645] gi|315164895|gb|EFU08912.1| ComE operon protein 2 [Enterococcus faecalis TX1302] gi|315166356|gb|EFU10373.1| ComE operon protein 2 [Enterococcus faecalis TX1341] gi|315170253|gb|EFU14270.1| ComE operon protein 2 [Enterococcus faecalis TX1342] gi|315574319|gb|EFU86510.1| ComE operon protein 2 [Enterococcus faecalis TX0309B] gi|315579112|gb|EFU91303.1| ComE operon protein 2 [Enterococcus faecalis TX0630] gi|315580206|gb|EFU92397.1| ComE operon protein 2 [Enterococcus faecalis TX0309A] gi|323481437|gb|ADX80876.1| comE operon protein 2 [Enterococcus faecalis 62] gi|327535732|gb|AEA94566.1| ComE operon protein 2 [Enterococcus faecalis OG1RF] gi|329572337|gb|EGG53994.1| ComE operon protein 2 [Enterococcus faecalis TX1467] Length = 167 Score = 67.6 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + T HAE+ AI + Sbjct: 28 VGATIVRDKRIIAGGYNGSVSGGTHCIDEGCYVVDNHCVRTIHAEMNAILQCAKFGVPT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++YVT PC C I A I+++YY Sbjct: 87 -EGAEIYVTHFPCLQCTKMILQAGIKKIYY 115 >gi|152976756|ref|YP_001376273.1| ComE operon protein 2 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025508|gb|ABS23278.1| ComE operon protein 2 [Bacillus cytotoxicus NVH 391-98] Length = 185 Score = 67.6 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----------D----VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + + Sbjct: 28 VGATIVRDKRIIAGGYNGSIKGGVHCIDEGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 ++YVT PC C AI + I +YY Sbjct: 87 -EGAEIYVTHFPCLQCCKAIIQSGITAVYYA 116 >gi|228960596|ref|ZP_04122243.1| ComE operon protein 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229048033|ref|ZP_04193608.1| ComE operon protein 2 [Bacillus cereus AH676] gi|229111800|ref|ZP_04241346.1| ComE operon protein 2 [Bacillus cereus Rock1-15] gi|229146898|ref|ZP_04275262.1| ComE operon protein 2 [Bacillus cereus BDRD-ST24] gi|228636497|gb|EEK92963.1| ComE operon protein 2 [Bacillus cereus BDRD-ST24] gi|228671556|gb|EEL26854.1| ComE operon protein 2 [Bacillus cereus Rock1-15] gi|228723277|gb|EEL74647.1| ComE operon protein 2 [Bacillus cereus AH676] gi|228799075|gb|EEM46045.1| ComE operon protein 2 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 188 Score = 67.6 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + ++ Sbjct: 31 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 90 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119 >gi|326942109|gb|AEA18005.1| ComE operon protein 2 [Bacillus thuringiensis serovar chinensis CT-43] Length = 185 Score = 67.6 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + ++ Sbjct: 28 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 87 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 116 >gi|302868567|ref|YP_003837204.1| riboflavin biosynthesis protein RibD [Micromonospora aurantiaca ATCC 27029] gi|302571426|gb|ADL47628.1| riboflavin biosynthesis protein RibD [Micromonospora aurantiaca ATCC 27029] Length = 295 Score = 67.6 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 40/138 (28%), Gaps = 23/138 (16%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A+ + PVG V + + + +R + AHAE+ A+ Sbjct: 10 MRQAIILSSLGLGTTSPNPPVGCVILDRHGATVGAGYHRRKGE----AHAEVNALSAAGP 65 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 VTLEPC C + A I R+ +P G Sbjct: 66 AA-----LGGTAVVTLEPCNHVGVTPACRQELIDAGIARVVISLIDPTSRGEGGAAVLTA 120 Query: 119 LATCHHSPEIYPGISEQR 136 H ++ + Sbjct: 121 -----HGIDVETNVLPDE 133 >gi|225010991|ref|ZP_03701457.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-3C] gi|225004898|gb|EEG42854.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-3C] Length = 146 Score = 67.6 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 47/129 (36%), Gaps = 19/129 (14%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-----RELKDVTA---- 52 K ++ A E + + + + VGA+ V + IIS N +D T Sbjct: 9 KYDQAYLRMAAEWGKLSYCKRKQ-VGAIVVKDRMIISDGYNGTPSGFENFCEDETGYTKW 67 Query: 53 ---HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 HAE A+ LY+TL PC C+ I + I+R+ Y K Sbjct: 68 YVLHAEANALSKVAASTQSS--EGATLYITLSPCKECSKLIHQSGIKRVVYA----KAYR 121 Query: 110 IENGTQFYT 118 +G F Sbjct: 122 DSSGIDFLA 130 >gi|320158842|ref|YP_004191220.1| DCMP deaminase [Vibrio vulnificus MO6-24/O] gi|319934154|gb|ADV89017.1| DCMP deaminase [Vibrio vulnificus MO6-24/O] Length = 152 Score = 67.2 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N T HAE AI + S+ L Sbjct: 27 VGAVITKQNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I I R+ Sbjct: 82 GCEIWVTHFPCPNCAAKIIQTGISRV 107 >gi|312867602|ref|ZP_07727808.1| putative ComE operon protein 2 [Streptococcus parasanguinis F0405] gi|311096665|gb|EFQ54903.1| putative ComE operon protein 2 [Streptococcus parasanguinis F0405] Length = 155 Score = 67.2 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 40/112 (35%), Gaps = 19/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-------------- 49 F + AL + A VGAV V +NK+I+ N + D Sbjct: 9 DEYFAAQALLISNRATCNRAK-VGAVLVKDNKVIATGYNGSVSGTDHCLEDGCLMVEGHC 67 Query: 50 -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI G + YVT PC C + +R+ Y Sbjct: 68 VRTIHAEVNAILQGAERGIPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116 >gi|296504819|ref|YP_003666519.1| ComE operon protein 2 [Bacillus thuringiensis BMB171] gi|296325871|gb|ADH08799.1| ComE operon protein 2 [Bacillus thuringiensis BMB171] Length = 185 Score = 67.2 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + ++ Sbjct: 28 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 87 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 116 >gi|118474836|ref|YP_892622.1| riboflavin biosynthesis protein RibD [Campylobacter fetus subsp. fetus 82-40] gi|118414062|gb|ABK82482.1| riboflavin biosynthesis protein RibD [Campylobacter fetus subsp. fetus 82-40] Length = 336 Score = 67.2 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 58/174 (33%), Gaps = 42/174 (24%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60 +M+ A+ +A VG V N +I+S N + + HAE+ AI+ Sbjct: 3 NEYYMNIAINKAWEFQFLTYPNPAVGCVITGKNGEILSI--NAHEKAGMP--HAELNAIK 58 Query: 61 MGCRI------------------------LSQEILPEVDLYVTLEPC------TMCAAAI 90 + +L YVTLEPC CA + Sbjct: 59 YALEMKNPAFKQDFDEIKDTNELYNFIMQNHSNLLNGSTAYVTLEPCSHQGRTPPCANLL 118 Query: 91 SLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 +++ GA + G Q + G+ ++++ ++++ F Sbjct: 119 KELGFKQVIIGAIDSSENAKG-GEQILKNSGIKTKI----GVCKEKADELLEPF 167 >gi|257087478|ref|ZP_05581839.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis D6] gi|307277118|ref|ZP_07558222.1| ComE operon protein 2 [Enterococcus faecalis TX2134] gi|256995508|gb|EEU82810.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis D6] gi|306506048|gb|EFM75214.1| ComE operon protein 2 [Enterococcus faecalis TX2134] gi|315025365|gb|EFT37297.1| ComE operon protein 2 [Enterococcus faecalis TX2137] Length = 167 Score = 67.2 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + T HAE+ AI + Sbjct: 28 VGATIVRDKRIIAGGYNGSVSGGTHCIDEGCYVVDNHCVRTIHAEMNAILQCAKFGVPT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++YVT PC C I A I+++YY Sbjct: 87 -EGAEIYVTHFPCLQCTKMILQAGIKKIYY 115 >gi|27366964|ref|NP_762491.1| Deoxycytidylate deaminase [Vibrio vulnificus CMCP6] gi|27358531|gb|AAO07481.1|AE016809_243 Deoxycytidylate deaminase [Vibrio vulnificus CMCP6] Length = 152 Score = 67.2 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N T HAE AI + S+ L Sbjct: 27 VGAVITKQNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I I R+ Sbjct: 82 GCEIWVTHFPCPNCAAKIIQTGISRV 107 >gi|322387410|ref|ZP_08061020.1| cytidine and deoxycytidylate deaminase [Streptococcus infantis ATCC 700779] gi|321141939|gb|EFX37434.1| cytidine and deoxycytidylate deaminase [Streptococcus infantis ATCC 700779] Length = 160 Score = 67.2 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 40/117 (34%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRE------LKDV-- 50 F + AL A + A VGAV V +NK+IS N + D Sbjct: 14 DEYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHDCLV 67 Query: 51 -------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI G + YVT PC C + R+ Y Sbjct: 68 IEGHCVRTLHAEVNAILQGSERGVPK---GFTAYVTHFPCLNCTKQLLQVGCERVVY 121 >gi|256616995|ref|ZP_05473841.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ATCC 4200] gi|256596522|gb|EEU15698.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ATCC 4200] Length = 151 Score = 67.2 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + T HAE+ AI + Sbjct: 28 VGATIVRDKRIIAGGYNGSVSGGTHCIDEGCYVVDNHCVRTIHAEMNAILQCAKFGVPT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++YVT PC C I A I+++YY Sbjct: 87 -EGAEIYVTHFPCLQCTKMILQAGIKKIYY 115 >gi|162457300|ref|YP_001619667.1| dCMP deaminase [Sorangium cellulosum 'So ce 56'] gi|161167882|emb|CAN99187.1| dCMP deaminase [Sorangium cellulosum 'So ce 56'] Length = 135 Score = 67.2 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 18/109 (16%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---LKD------------VTA 52 M A A A + VGAV V + I++ N + D T Sbjct: 1 MRIAEVVASRATCDRKH-VGAVIVRDKSILATGYNGSIRGLPHCDEDGHLIEDGHCVRTI 59 Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + + +YVT PC C I+ A + R+ +G Sbjct: 60 HAEANAIIQAAR--NGVRIDGATVYVTASPCWGCFKMIANAGLSRVVFG 106 >gi|301756412|ref|XP_002914055.1| PREDICTED: deoxycytidylate deaminase-like [Ailuropoda melanoleuca] Length = 178 Score = 67.2 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52 FM+ A AQ + N VGA V NKI+ N D TA Sbjct: 17 EYFMAVAFLSAQRSKDPNSQ-VGACIVNAENKIVGIGYNGMPNGCSDDLLPWRRTAESKL 75 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 76 DTKYPYVCHAELNAIMN----KNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIF 127 >gi|109076283|ref|XP_001092119.1| PREDICTED: deoxycytidylate deaminase isoform 3 [Macaca mulatta] gi|297293743|ref|XP_002804315.1| PREDICTED: deoxycytidylate deaminase [Macaca mulatta] Length = 178 Score = 67.2 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52 FM+ A AQ + N VGA V NKI+ N D TA Sbjct: 17 EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDLLPWSRTAENKL 75 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 76 DTKYPYVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127 >gi|327439586|dbj|BAK15951.1| deoxycytidylate deaminase [Solibacillus silvestris StLB046] Length = 191 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 41/116 (35%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49 + FM+ + A + + VGA V +II+ N + + Sbjct: 4 ITWDQFFMAQSHLLALRSTCSR-LAVGATIVREKRIIAGGYNGSISGDEHCIEEGCYVVD 62 Query: 50 ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE A+ C DLYVT PC C I A I+ +YY Sbjct: 63 NHCVRTVHAETNALLQ-CAKYGTPA-NGADLYVTHFPCLPCTKTIIQAGIKNVYYA 116 >gi|325479743|gb|EGC82833.1| putative ComE operon protein 2 [Anaerococcus prevotii ACS-065-V-Col13] Length = 146 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 46/126 (36%), Gaps = 34/126 (26%) Query: 1 MKKG-----NVFMSCALEEA-----QNAALRNEIPVGAVAV-LNNKIISRAGNRNR---- 45 M K FM A A A VG V V N+I++ N + Sbjct: 1 MAKDRLSWQEYFMKLAKNVAMRGTCDRAY------VGCVIVNEENRIVTTGYNGSISGNP 54 Query: 46 -------ELKD----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 ++D T HAE+ AI + L + YVT PC C ++ A Sbjct: 55 HCDEVGHTMRDGHCIATIHAEMNAILYCAKEGIA--LKDTICYVTHFPCLNCTKSLIQAG 112 Query: 95 IRRLYY 100 I+++YY Sbjct: 113 IKKIYY 118 >gi|229129607|ref|ZP_04258575.1| ComE operon protein 2 [Bacillus cereus BDRD-Cer4] gi|229152530|ref|ZP_04280720.1| ComE operon protein 2 [Bacillus cereus m1550] gi|228630896|gb|EEK87535.1| ComE operon protein 2 [Bacillus cereus m1550] gi|228653724|gb|EEL09594.1| ComE operon protein 2 [Bacillus cereus BDRD-Cer4] Length = 188 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + ++ Sbjct: 31 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 90 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119 >gi|50365203|ref|YP_053628.1| deoxycytidylate deaminase [Mesoplasma florum L1] gi|50363759|gb|AAT75744.1| deoxycytidylate deaminase [Mesoplasma florum L1] Length = 157 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 53/128 (41%), Gaps = 37/128 (28%) Query: 1 MKKGNV------FMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN-------- 42 MK+ N FM+ A A + P VGA+ V N N+IIS N Sbjct: 1 MKRENFLNWEQFFMTVAKVCAMRSKD----PSTQVGAILVNNLNQIISTGYNGFPRGVND 56 Query: 43 ------RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 R E D AHAE+ AI + L + D+YVTL PC C I Sbjct: 57 DEFPWTREGEWIDTKYPYVAHAELNAIVSA-----RTNLTDSDVYVTLFPCNECTKIIIQ 111 Query: 93 ARIRRLYY 100 A I+++YY Sbjct: 112 AGIKKVYY 119 >gi|291460249|ref|ZP_06599639.1| putative deoxycytidylate deaminase [Oribacterium sp. oral taxon 078 str. F0262] gi|291417196|gb|EFE90915.1| putative deoxycytidylate deaminase [Oribacterium sp. oral taxon 078 str. F0262] Length = 166 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 45/125 (36%), Gaps = 33/125 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-------------- 42 + FM A A+ + P VGA V +NKI+S N Sbjct: 11 ISWEEYFMGVAEMSARRSKD----PSTQVGACIVSRDNKILSMGYNGFPRGCSDDLFPWT 66 Query: 43 RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 + D + HAE+ AI L LYVTL PC CA A+ A I Sbjct: 67 KIHVSDDPYNAKYFYSTHAELNAILN----YRGGSLEGAKLYVTLFPCNECAKALIQAGI 122 Query: 96 RRLYY 100 + L Y Sbjct: 123 KTLVY 127 >gi|227486316|ref|ZP_03916632.1| competence protein ComEB [Anaerococcus lactolyticus ATCC 51172] gi|227235727|gb|EEI85742.1| competence protein ComEB [Anaerococcus lactolyticus ATCC 51172] Length = 147 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 41/118 (34%), Gaps = 29/118 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAV-LNNKIISRAGNRN---RELKD----- 49 FM A A A VG V V N+I+S N + D Sbjct: 9 DEYFMRLAETVAMRGTCDRAY------VGCVLVNSENRIVSTGYNGSIKGNAHCDEIGHT 62 Query: 50 -------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ + + YVT PC C ++ A I+++YY Sbjct: 63 MRDGHCIATIHAEMNALLYCAKEGIA--VNNCICYVTHFPCLNCTKSLIQAGIKKIYY 118 >gi|302390580|ref|YP_003826401.1| CMP/dCMP deaminase zinc-binding protein [Thermosediminibacter oceani DSM 16646] gi|302201208|gb|ADL08778.1| CMP/dCMP deaminase zinc-binding protein [Thermosediminibacter oceani DSM 16646] Length = 152 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 45/120 (37%), Gaps = 26/120 (21%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 + FM A A+ + VGAV VL +I++ N +L+ Sbjct: 10 DDYFMEIAGVVAKRSTCLR-RSVGAVVVLEKRILTTGYNGAPTGLSHCGDVGCLREKLRI 68 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI + + +YVT +PC +CA + A IRR+ + Sbjct: 69 PPGERHELCRGLHAEQNAIIQAAIWGTS--IKGATIYVTHQPCALCAKMLINAGIRRIVF 126 >gi|229098798|ref|ZP_04229736.1| ComE operon protein 2 [Bacillus cereus Rock3-29] gi|228684642|gb|EEL38582.1| ComE operon protein 2 [Bacillus cereus Rock3-29] Length = 188 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + ++ Sbjct: 31 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 90 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119 >gi|304320114|ref|YP_003853757.1| diaminohydroxyphosphoriboxylaminopyrimidine deaminase +5-amino-6-(5-phosphoribosylamino)uracil reductase (RibD) [Parvularcula bermudensis HTCC2503] gi|303299017|gb|ADM08616.1| diaminohydroxyphosphoriboxylaminopyrimidine deaminase +5-amino-6-(5-phosphoribosylamino)uracil reductase (RibD) [Parvularcula bermudensis HTCC2503] Length = 366 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 38/117 (32%), Gaps = 17/117 (14%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 ++ M A + A VG V V +I+ + R D HAEI Sbjct: 4 TDDICMDRAAALGELGAGFTAPNPMVGCVLVKGGQIVGEGYH-PRPGAD---HAEIA--- 56 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 + YVTLEPC C A+ A + + Y ++P Sbjct: 57 --ALKAAGAEARGAVAYVTLEPCNHYGATPPCTKALIEAGVAEVVYAVADPNPLASG 111 >gi|322420509|ref|YP_004199732.1| dCMP deaminase [Geobacter sp. M18] gi|320126896|gb|ADW14456.1| dCMP deaminase [Geobacter sp. M18] Length = 151 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 27/104 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGAV V + I++ N ++ + HAE AI Sbjct: 28 VGAVLVKDKNILATGYNGAPSGTSHCLDIGCLREKMGIPSGERHELCRGLHAEQNAIIQA 87 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASN 104 + + + LY PC +C+ + A I+R+ Y G + Sbjct: 88 AKHGTS--IEGATLYCNTMPCIICSKMVINAGIKRVVYLSGYPD 129 >gi|228910163|ref|ZP_04073982.1| ComE operon protein 2 [Bacillus thuringiensis IBL 200] gi|228849446|gb|EEM94281.1| ComE operon protein 2 [Bacillus thuringiensis IBL 200] Length = 188 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + ++ Sbjct: 31 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 90 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119 >gi|149191235|ref|ZP_01869491.1| deoxycytidylate deaminase [Vibrio shilonii AK1] gi|148834905|gb|EDL51886.1| deoxycytidylate deaminase [Vibrio shilonii AK1] Length = 147 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 32/86 (37%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV NN+I+S N T HAE AI R L Sbjct: 27 VGAVITKNNRIVSVGFNGYPHGISDSAEVDERETKYLKTLHAEENAILFAKR-----DLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I I + Sbjct: 82 GCEIWVTHFPCPNCAAKIIQTGISVV 107 >gi|218234584|ref|YP_002369136.1| ComE operon protein 2 [Bacillus cereus B4264] gi|218162541|gb|ACK62533.1| ComE operon protein 2 [Bacillus cereus B4264] Length = 185 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + ++ Sbjct: 28 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 87 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 116 >gi|238502305|ref|XP_002382386.1| conserved hypothetical protein [Aspergillus flavus NRRL3357] gi|220691196|gb|EED47544.1| conserved hypothetical protein [Aspergillus flavus NRRL3357] Length = 164 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 40/117 (34%), Gaps = 19/117 (16%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVT----AHAEILAIRMGCRILSQEILPEVDLYVTL 80 P A+ + + N + ++ HAE R +++ L E T Sbjct: 31 PFAALLLAPD-------NTTVLMSSLSLSHVRHAEAELARNAADNYARDYLAETTFISTW 83 Query: 81 EPCTMCAAAISLARIRRLYYGASNPKGGGI---ENGTQFYTLATC-----HHSPEIY 129 EPC MCA I A I RL Y AS G+ N C + E+ Sbjct: 84 EPCAMCAGTIYWANIGRLVYLASEKALQGVIGEGNIENLTLDLPCRTVFANGQTEVE 140 >gi|163790315|ref|ZP_02184747.1| comE operon protein 2, putative [Carnobacterium sp. AT7] gi|159874386|gb|EDP68458.1| comE operon protein 2, putative [Carnobacterium sp. AT7] Length = 171 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 50/141 (35%), Gaps = 37/141 (26%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDV----------------TAHAEILAIRMGCRILSQE 69 VGA V +II+ N + DV T HAE+ AI + +Q Sbjct: 29 VGATIVREKRIIAGGYNGSVS-GDVHCIDEGCYVVDGHCLRTIHAEMNAILQCAKFGAQT 87 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 ++YVT PC C I A I ++YY ++ E Sbjct: 88 --QGAEIYVTHFPCLQCTKMIIQAGITKIYY------------LEDYHNDPYALKLIE-Q 132 Query: 130 PGISEQRSR--QIIQDFFKER 148 + + + + +DFF++ Sbjct: 133 AHV---QCQKVALPKDFFQQL 150 >gi|163816077|ref|ZP_02207447.1| hypothetical protein COPEUT_02257 [Coprococcus eutactus ATCC 27759] gi|158448887|gb|EDP25882.1| hypothetical protein COPEUT_02257 [Coprococcus eutactus ATCC 27759] Length = 159 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 44/122 (36%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRNRELKDVTA---- 52 + FM A+ A+ + P VGA V NN+I+S N D A Sbjct: 7 ISWDQYFMGIAMMSAERSKD----PSTQVGACIVDKNNRILSMGYNGMPAGCDDDAMPWG 62 Query: 53 --------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ +I L + +Y TL PC CA AI I+ + Sbjct: 63 KVGNPLDNKYFYVCHAELNSILN----YRGGNLKDAIIYSTLFPCNECAKAIIQCGIKEV 118 Query: 99 YY 100 Y Sbjct: 119 VY 120 >gi|313115327|ref|ZP_07800802.1| cytidine and deoxycytidylate deaminase zinc-binding region [Faecalibacterium cf. prausnitzii KLE1255] gi|310622358|gb|EFQ05838.1| cytidine and deoxycytidylate deaminase zinc-binding region [Faecalibacterium cf. prausnitzii KLE1255] Length = 159 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 41/119 (34%), Gaps = 24/119 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGN--------------RNR 45 + FM AL A + N VGA V NKI+S N R Sbjct: 7 INWDEYFMGIALLTAMRSKDPNSQ-VGACIVSSENKILSLGYNGMPIGCSDDEMPWEREG 65 Query: 46 ELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D HAE+ AI L +YVTL PC C AI + I + Y Sbjct: 66 APLDTKYMYVCHAELNAILNSAHN----NLKGARVYVTLFPCNECTKAIIQSGIAEVVY 120 >gi|262067377|ref|ZP_06026989.1| putative deoxycytidylate deaminase [Fusobacterium periodonticum ATCC 33693] gi|291378940|gb|EFE86458.1| putative deoxycytidylate deaminase [Fusobacterium periodonticum ATCC 33693] Length = 160 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 46/122 (37%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------R 43 + + FM AL + + P VGA V +K I+ N Sbjct: 6 IDWDSYFMGIALLSSMRSKD----PNTQVGACIVNEDKRIVGVGYNGLPKGCEDTDFPWE 61 Query: 44 NR----ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 E K HAE+ AI + S + L + +YV L PC C+ AI + I+ + Sbjct: 62 REGDFLETKYPYVCHAELNAI-----LNSIKSLKDCVIYVALFPCNECSKAIIQSGIKEI 116 Query: 99 YY 100 Y Sbjct: 117 VY 118 >gi|237738775|ref|ZP_04569256.1| deoxycytidylate deaminase [Fusobacterium sp. 2_1_31] gi|229423878|gb|EEO38925.1| deoxycytidylate deaminase [Fusobacterium sp. 2_1_31] Length = 160 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 46/122 (37%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------R 43 + + FM AL + + P VGA V +K I+ N Sbjct: 6 IDWDSYFMGIALLSSMRSKD----PNTQVGACIVNEDKRIVGVGYNGLPKGCEDTDFPWE 61 Query: 44 NR----ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 E K HAE+ AI + S + L + +YV L PC C+ AI + I+ + Sbjct: 62 REGEFLETKYPYVCHAELNAI-----LNSIKSLKDCVIYVALFPCNECSKAIIQSGIKEI 116 Query: 99 YY 100 Y Sbjct: 117 VY 118 >gi|169832085|ref|YP_001718067.1| CMP/dCMP deaminase [Candidatus Desulforudis audaxviator MP104C] gi|169638929|gb|ACA60435.1| CMP/dCMP deaminase, zinc-binding [Candidatus Desulforudis audaxviator MP104C] Length = 149 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 42/127 (33%), Gaps = 29/127 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------RNRELK 48 +FM A A+ + VGAV V +N+ I+ N +L Sbjct: 6 DEIFMEQAHLMARRSTCLRRH-VGAVLVRDNRAIASGYNGPPSGLPHCDERGGCLREQLG 64 Query: 49 DVTAH---------AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 + H AE I + LYVT PC CA + +RR+ Sbjct: 65 VPSGHRQEICRALHAEQNVILQLAITGLNGR--DATLYVTHFPCFTCAKLLVQLGVRRII 122 Query: 100 Y--GASN 104 Y G + Sbjct: 123 YQLGYPD 129 >gi|153853661|ref|ZP_01995041.1| hypothetical protein DORLON_01032 [Dorea longicatena DSM 13814] gi|149753816|gb|EDM63747.1| hypothetical protein DORLON_01032 [Dorea longicatena DSM 13814] Length = 162 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 57/149 (38%), Gaps = 32/149 (21%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR------------N 44 + FM A + + +R++ P VG V +NKI+S N Sbjct: 9 ISWDEYFMGVA----KLSGMRSKDPNTQVGCCIVSQDNKILSMGYNGLPTGCSDDVFPWG 64 Query: 45 RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 RE D T H+E+ AI L LYV+L PC CA AI + I+ Sbjct: 65 REGDDPLETKYVYTVHSELNAILN----YRGGSLEGAKLYVSLFPCNECAKAIIQSGIKE 120 Query: 98 LYYGASNPKG-GGIENGTQFYTLATCHHS 125 + Y + +G + + + A ++ Sbjct: 121 VIYDCNKYEGTAAVMASMKMFDAAGVNYH 149 >gi|123505764|ref|XP_001329053.1| Cytidine and deoxycytidylate deaminase zinc-binding region family protein [Trichomonas vaginalis G3] gi|121912003|gb|EAY16830.1| Cytidine and deoxycytidylate deaminase zinc-binding region family protein [Trichomonas vaginalis G3] Length = 264 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 3/77 (3%) Query: 53 HAEILAIRMGCRI---LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 H I A+ R + +D+Y EPC MC A+ +R+ RL++ NPK GG Sbjct: 177 HGVIDAVGEASRWAIQNDSYLCTNLDVYCYYEPCCMCTMAMVHSRVGRLFFIEPNPKYGG 236 Query: 110 IENGTQFYTLATCHHSP 126 + N +H Sbjct: 237 VMNQAHINQSPKINHRF 253 >gi|154248745|ref|YP_001409570.1| CMP/dCMP deaminase zinc-binding [Fervidobacterium nodosum Rt17-B1] gi|154152681|gb|ABS59913.1| CMP/dCMP deaminase zinc-binding [Fervidobacterium nodosum Rt17-B1] Length = 170 Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 34/130 (26%) Query: 4 GNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRN-------------REL 47 F A A+ + + VGA+ V + +I++ N+ R+ Sbjct: 25 DEYFKRLAKVIAERSTCVHRK----VGALIVKDKRILATGYNQPPSGFPHCDEIGCIRDD 80 Query: 48 KDVTA----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 + + HAE A+ + +YVT +PC++CA I A I++ Sbjct: 81 LSIPSGKNQEICYGLHAEQNALIQAAKFGISTD--GATIYVTHKPCSVCARLIINAGIKK 138 Query: 98 LYY--GASNP 105 + Y G +P Sbjct: 139 VVYIEGYPDP 148 >gi|327285966|ref|XP_003227702.1| PREDICTED: deoxycytidylate deaminase-like [Anolis carolinensis] Length = 235 Score = 67.2 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 42/119 (35%), Gaps = 31/119 (26%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-RNRELKD------VTA- 52 FM+ A AQ + P VGA V NKI+ N D TA Sbjct: 33 EYFMAVAFLSAQRSKD----PHSQVGACIVNSENKIVGIGYNGMPNGCSDDSLPWTRTAE 88 Query: 53 -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 89 SKLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIF 143 >gi|50306895|ref|XP_453423.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49642557|emb|CAH00519.1| KLLA0D08074p [Kluyveromyces lactis] Length = 340 Score = 67.2 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 38/120 (31%), Gaps = 29/120 (24%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---------------RNRE 46 FM A A A R VG V V + ++++ N R + Sbjct: 183 DTYFMKLANLAASRANCMKRR---VGCVIVRDCRVVATGYNGTPRNMKNCNQGGCSRCND 239 Query: 47 LKDVT------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D + HAE A+ R P LY PC C+ I I+ + Y Sbjct: 240 GDDKSLHTCLCLHAEENALLEAGRDRVG---PNAILYCDTCPCLTCSVKIVQTGIKEVVY 296 >gi|296195104|ref|XP_002745234.1| PREDICTED: deoxycytidylate deaminase-like [Callithrix jacchus] Length = 178 Score = 67.2 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52 FM+ A AQ + N VGA V NKI+ N D TA Sbjct: 17 EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDLLPWRRTAENKL 75 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A IR + + Sbjct: 76 DTKYPYVCHAELNAIMN----KNSTDVKGCTMYVALFPCNECAKLIIQAGIREVIF 127 >gi|229117824|ref|ZP_04247188.1| ComE operon protein 2 [Bacillus cereus Rock1-3] gi|228665621|gb|EEL21099.1| ComE operon protein 2 [Bacillus cereus Rock1-3] Length = 188 Score = 67.2 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + ++ Sbjct: 31 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 90 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119 >gi|228902852|ref|ZP_04066995.1| ComE operon protein 2 [Bacillus thuringiensis IBL 4222] gi|228954613|ref|ZP_04116637.1| ComE operon protein 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229071833|ref|ZP_04205046.1| ComE operon protein 2 [Bacillus cereus F65185] gi|229081590|ref|ZP_04214086.1| ComE operon protein 2 [Bacillus cereus Rock4-2] gi|229180604|ref|ZP_04307945.1| ComE operon protein 2 [Bacillus cereus 172560W] gi|229192539|ref|ZP_04319500.1| ComE operon protein 2 [Bacillus cereus ATCC 10876] gi|228590846|gb|EEK48704.1| ComE operon protein 2 [Bacillus cereus ATCC 10876] gi|228602847|gb|EEK60327.1| ComE operon protein 2 [Bacillus cereus 172560W] gi|228701696|gb|EEL54186.1| ComE operon protein 2 [Bacillus cereus Rock4-2] gi|228711263|gb|EEL63225.1| ComE operon protein 2 [Bacillus cereus F65185] gi|228805059|gb|EEM51654.1| ComE operon protein 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228856776|gb|EEN01293.1| ComE operon protein 2 [Bacillus thuringiensis IBL 4222] Length = 188 Score = 67.2 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + ++ Sbjct: 31 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 90 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119 >gi|124268129|ref|YP_001022133.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Methylibium petroleiphilum PM1] gi|124260904|gb|ABM95898.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Methylibium petroleiphilum PM1] Length = 377 Score = 67.2 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 43/122 (35%), Gaps = 15/122 (12%) Query: 10 CALEEAQNA-ALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 AL A A L + P VG V + ++++ + +AHAE+ A+R Sbjct: 11 LALRNANEAIGLSDPNPRVGCVITAPDGRLLASGHTQRA----GSAHAEVSALRAAQAAG 66 Query: 67 SQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 +VTLEPC C A+ A + + +P +G A Sbjct: 67 HTVR--GGTAWVTLEPCSHHGRTPPCCDALVEAGVAHVMVALQDPNPLVAGHGIGRLRAA 124 Query: 121 TC 122 Sbjct: 125 GI 126 >gi|297293741|ref|XP_001092239.2| PREDICTED: deoxycytidylate deaminase isoform 4 [Macaca mulatta] Length = 189 Score = 67.2 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52 FM+ A AQ + N VGA V NKI+ N D TA Sbjct: 28 EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDLLPWSRTAENKL 86 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 87 DTKYPYVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 138 >gi|229076001|ref|ZP_04208974.1| ComE operon protein 2 [Bacillus cereus Rock4-18] gi|229104958|ref|ZP_04235614.1| ComE operon protein 2 [Bacillus cereus Rock3-28] gi|228678452|gb|EEL32673.1| ComE operon protein 2 [Bacillus cereus Rock3-28] gi|228707113|gb|EEL59313.1| ComE operon protein 2 [Bacillus cereus Rock4-18] Length = 188 Score = 67.2 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + ++ Sbjct: 31 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 90 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119 >gi|229019551|ref|ZP_04176367.1| ComE operon protein 2 [Bacillus cereus AH1273] gi|229025792|ref|ZP_04182191.1| ComE operon protein 2 [Bacillus cereus AH1272] gi|228735500|gb|EEL86096.1| ComE operon protein 2 [Bacillus cereus AH1272] gi|228741717|gb|EEL91901.1| ComE operon protein 2 [Bacillus cereus AH1273] Length = 185 Score = 67.2 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + + Sbjct: 28 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 87 -EESEIYVTHFPCLQCCKAIIQSGITAVYYA 116 >gi|206969676|ref|ZP_03230630.1| ComE operon protein 2 [Bacillus cereus AH1134] gi|218899494|ref|YP_002447905.1| ComE operon protein 2 [Bacillus cereus G9842] gi|206735364|gb|EDZ52532.1| ComE operon protein 2 [Bacillus cereus AH1134] gi|218543217|gb|ACK95611.1| ComE operon protein 2 [Bacillus cereus G9842] Length = 185 Score = 67.2 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + ++ Sbjct: 28 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 87 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 116 >gi|228923079|ref|ZP_04086371.1| ComE operon protein 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836577|gb|EEM81926.1| ComE operon protein 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 185 Score = 66.9 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + ++ Sbjct: 28 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 87 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 116 >gi|308471917|ref|XP_003098188.1| hypothetical protein CRE_12208 [Caenorhabditis remanei] gi|308269339|gb|EFP13292.1| hypothetical protein CRE_12208 [Caenorhabditis remanei] Length = 194 Score = 66.9 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 29/121 (23%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNR----------NRE 46 ++K F+ A + + P VG V V +N I+S N + Sbjct: 45 LQKHQRFLRMAKVTSLRSKD----PNTQVGCVIVDKDNCIVSVGYNGFPIGVDDDVFRWD 100 Query: 47 LKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 +D HAE+ AI + + L + +YVTL PC CA + +R++++Y Sbjct: 101 KEDPEDNKHLYVVHAEMNAIIN--KRCAT--LHDCIVYVTLFPCNKCAQMLIQSRVKKVY 156 Query: 100 Y 100 Y Sbjct: 157 Y 157 >gi|304439109|ref|ZP_07399028.1| competence protein ComEB [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372468|gb|EFM26055.1| competence protein ComEB [Peptoniphilus duerdenii ATCC BAA-1640] Length = 140 Score = 66.9 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 21/118 (17%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRN---RELKD----- 49 M+K FM A + VG + V +N+I+S N + + D Sbjct: 1 MRKSWDEYFMEITEMVATRSTCDRAF-VGCILVNKDNRIVSTGYNGSLSGNKSCDEIGHT 59 Query: 50 -------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ + + YVT PC C A+ A I +YY Sbjct: 60 MRDGHCIATIHAEMNALLYCAKEGIS--VKGCKCYVTHFPCLNCTKALLQAGITEIYY 115 >gi|147671596|ref|YP_001215236.1| putative deoxycytidylate deaminase [Vibrio cholerae O395] gi|153822471|ref|ZP_01975138.1| deoxycytidylate deaminase, putative [Vibrio cholerae B33] gi|254849997|ref|ZP_05239347.1| deoxycytidylate deaminase [Vibrio cholerae MO10] gi|297580143|ref|ZP_06942070.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|298499626|ref|ZP_07009432.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|126519994|gb|EAZ77217.1| deoxycytidylate deaminase, putative [Vibrio cholerae B33] gi|146313979|gb|ABQ18519.1| putative deoxycytidylate deaminase [Vibrio cholerae O395] gi|254845702|gb|EET24116.1| deoxycytidylate deaminase [Vibrio cholerae MO10] gi|297535789|gb|EFH74623.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297541607|gb|EFH77658.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 166 Score = 66.9 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN---------RNRELKDV----TAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N + + +D+ T HAE AI R L Sbjct: 32 VGAVITKQNRIVSVGFNGYPHGISDSASTDDRDMKYLKTLHAEENAILFAKR-----DLD 86 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 ++YVT PC CAA I I + Sbjct: 87 GCEIYVTHFPCPNCAAKIIQTGISAV 112 >gi|153817018|ref|ZP_01969685.1| deoxycytidylate deaminase, putative [Vibrio cholerae NCTC 8457] gi|126512428|gb|EAZ75022.1| deoxycytidylate deaminase, putative [Vibrio cholerae NCTC 8457] Length = 166 Score = 66.9 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN---------RNRELKDV----TAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N + + +D+ T HAE AI R L Sbjct: 32 VGAVITKQNRIVSVGFNGYPHGISDSASTDDRDMKYLKTLHAEENAILFAKR-----DLD 86 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 ++YVT PC CAA I I + Sbjct: 87 GCEIYVTHFPCPNCAAKIIQTGISAV 112 >gi|153214325|ref|ZP_01949326.1| deoxycytidylate deaminase, putative [Vibrio cholerae 1587] gi|124115382|gb|EAY34202.1| deoxycytidylate deaminase, putative [Vibrio cholerae 1587] Length = 161 Score = 66.9 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN---------RNRELKDV----TAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N + + +D+ T HAE AI R L Sbjct: 27 VGAVITKQNRIVSVGFNGYPHGISDSASTDDRDMKYLKTLHAEENAILFAKR-----DLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 ++YVT PC CAA I I + Sbjct: 82 GCEIYVTHFPCPNCAAKIIQTGISAV 107 >gi|153825415|ref|ZP_01978082.1| deoxycytidylate deaminase [Vibrio cholerae MZO-2] gi|254224811|ref|ZP_04918427.1| deoxycytidylate deaminase, putative [Vibrio cholerae V51] gi|125622874|gb|EAZ51192.1| deoxycytidylate deaminase, putative [Vibrio cholerae V51] gi|149740961|gb|EDM55038.1| deoxycytidylate deaminase [Vibrio cholerae MZO-2] Length = 161 Score = 66.9 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN---------RNRELKDV----TAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N + + +D+ T HAE AI R L Sbjct: 27 VGAVITKQNRIVSVGFNGYPHGISDSASTDDRDMKYLKTLHAEENAILFAKR-----DLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 ++YVT PC CAA I I + Sbjct: 82 GCEIYVTHFPCPNCAAKIIQTGISAV 107 >gi|15601595|ref|NP_233226.1| deoxycytidylate deaminase, putative [Vibrio cholerae O1 biovar eltor str. N16961] gi|121588185|ref|ZP_01677930.1| deoxycytidylate deaminase, putative [Vibrio cholerae 2740-80] gi|121729861|ref|ZP_01682290.1| deoxycytidylate deaminase, putative [Vibrio cholerae V52] gi|153802745|ref|ZP_01957331.1| deoxycytidylate deaminase, putative [Vibrio cholerae MZO-3] gi|153829488|ref|ZP_01982155.1| putative deoxycytidylate deaminase [Vibrio cholerae 623-39] gi|227812406|ref|YP_002812416.1| putative deoxycytidylate deaminase [Vibrio cholerae M66-2] gi|229506010|ref|ZP_04395519.1| deoxycytidylate deaminase [Vibrio cholerae BX 330286] gi|229510134|ref|ZP_04399614.1| deoxycytidylate deaminase [Vibrio cholerae B33] gi|229514270|ref|ZP_04403731.1| deoxycytidylate deaminase [Vibrio cholerae TMA 21] gi|229517736|ref|ZP_04407181.1| deoxycytidylate deaminase [Vibrio cholerae RC9] gi|229522385|ref|ZP_04411801.1| deoxycytidylate deaminase [Vibrio cholerae TM 11079-80] gi|229526654|ref|ZP_04416058.1| deoxycytidylate deaminase [Vibrio cholerae bv. albensis VL426] gi|229528303|ref|ZP_04417694.1| deoxycytidylate deaminase [Vibrio cholerae 12129(1)] gi|229605541|ref|YP_002876245.1| deoxycytidylate deaminase [Vibrio cholerae MJ-1236] gi|254284476|ref|ZP_04959443.1| deoxycytidylate deaminase, putative [Vibrio cholerae AM-19226] gi|255746409|ref|ZP_05420356.1| deoxycytidylate deaminase [Vibrio cholera CIRS 101] gi|262158237|ref|ZP_06029354.1| deoxycytidylate deaminase [Vibrio cholerae INDRE 91/1] gi|262169113|ref|ZP_06036806.1| deoxycytidylate deaminase [Vibrio cholerae RC27] gi|262191582|ref|ZP_06049763.1| deoxycytidylate deaminase [Vibrio cholerae CT 5369-93] gi|9658270|gb|AAF96738.1| deoxycytidylate deaminase, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547577|gb|EAX57679.1| deoxycytidylate deaminase, putative [Vibrio cholerae 2740-80] gi|121628394|gb|EAX60893.1| deoxycytidylate deaminase, putative [Vibrio cholerae V52] gi|124121702|gb|EAY40445.1| deoxycytidylate deaminase, putative [Vibrio cholerae MZO-3] gi|148875007|gb|EDL73142.1| putative deoxycytidylate deaminase [Vibrio cholerae 623-39] gi|150425261|gb|EDN17037.1| deoxycytidylate deaminase, putative [Vibrio cholerae AM-19226] gi|227011548|gb|ACP07759.1| putative deoxycytidylate deaminase [Vibrio cholerae M66-2] gi|227015488|gb|ACP11697.1| putative deoxycytidylate deaminase [Vibrio cholerae O395] gi|229334665|gb|EEO00151.1| deoxycytidylate deaminase [Vibrio cholerae 12129(1)] gi|229336812|gb|EEO01830.1| deoxycytidylate deaminase [Vibrio cholerae bv. albensis VL426] gi|229340370|gb|EEO05376.1| deoxycytidylate deaminase [Vibrio cholerae TM 11079-80] gi|229345772|gb|EEO10745.1| deoxycytidylate deaminase [Vibrio cholerae RC9] gi|229348250|gb|EEO13208.1| deoxycytidylate deaminase [Vibrio cholerae TMA 21] gi|229352579|gb|EEO17519.1| deoxycytidylate deaminase [Vibrio cholerae B33] gi|229356361|gb|EEO21279.1| deoxycytidylate deaminase [Vibrio cholerae BX 330286] gi|229372027|gb|ACQ62449.1| deoxycytidylate deaminase [Vibrio cholerae MJ-1236] gi|255736163|gb|EET91561.1| deoxycytidylate deaminase [Vibrio cholera CIRS 101] gi|262022394|gb|EEY41102.1| deoxycytidylate deaminase [Vibrio cholerae RC27] gi|262029919|gb|EEY48566.1| deoxycytidylate deaminase [Vibrio cholerae INDRE 91/1] gi|262032547|gb|EEY51104.1| deoxycytidylate deaminase [Vibrio cholerae CT 5369-93] gi|327485838|gb|AEA80244.1| dCMP deaminase [Vibrio cholerae LMA3894-4] Length = 161 Score = 66.9 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN---------RNRELKDV----TAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N + + +D+ T HAE AI R L Sbjct: 27 VGAVITKQNRIVSVGFNGYPHGISDSASTDDRDMKYLKTLHAEENAILFAKR-----DLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 ++YVT PC CAA I I + Sbjct: 82 GCEIYVTHFPCPNCAAKIIQTGISAV 107 >gi|181537|gb|AAA35755.1| deoxycytidylate deaminase [Homo sapiens] Length = 178 Score = 66.9 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52 FM+ A AQ + N VGA V NKI+ N D TA Sbjct: 17 EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKL 75 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 76 DTKYPYVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127 >gi|260495001|ref|ZP_05815130.1| ComE operon protein 2 [Fusobacterium sp. 3_1_33] gi|260197444|gb|EEW94962.1| ComE operon protein 2 [Fusobacterium sp. 3_1_33] Length = 161 Score = 66.9 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 44/122 (36%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKD------- 49 + + FM A+ + + P VGA V +K I+ N + D Sbjct: 6 INWDSYFMGIAILSSMRSKD----PNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWE 61 Query: 50 ----------V-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ AI + S + L +YV L PC C AI + I+ + Sbjct: 62 RDGEFLNTKYPYVCHAELNAI-----LNSIKSLKNCTIYVALFPCHECTKAIIQSGIKEI 116 Query: 99 YY 100 Y Sbjct: 117 VY 118 >gi|284047807|ref|YP_003398146.1| CMP/dCMP deaminase zinc-binding protein [Acidaminococcus fermentans DSM 20731] gi|283952028|gb|ADB46831.1| CMP/dCMP deaminase zinc-binding protein [Acidaminococcus fermentans DSM 20731] Length = 150 Score = 66.9 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 49/134 (36%), Gaps = 33/134 (24%) Query: 1 MKK---GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN------------- 42 M++ + FM A ++ + R VGAV V + +I++ N Sbjct: 1 MERPDWDSYFMEIAEVVSKRSTCLRRK---VGAVLVKDRQILATGYNGTPKGLPHCEQVG 57 Query: 43 -RNRELKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 +L + HAE A+ + L LY T +PC +C+ + Sbjct: 58 CLREKLHVPSGQNHELCRGIHAEQNAVIQAA-VNGVSTL-GATLYCTHQPCVVCSKILIN 115 Query: 93 ARIRRLYYGASNPK 106 A I+R+ Y P Sbjct: 116 AGIKRIVYANPYPD 129 >gi|326430014|gb|EGD75584.1| deoxycytidylate deaminase [Salpingoeca sp. ATCC 50818] Length = 237 Score = 66.9 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 44/126 (34%), Gaps = 32/126 (25%) Query: 5 NVF-MSCALEEAQNAALRNEIPV---GAVAVLN-NKIISRAGN----------------- 42 + M+ A+ ++ + PV G V V ++S N Sbjct: 20 EAWHMAMAILASKRSKD----PVTQVGCVIVDPKGIVVSMGYNGFPIGCSDEELPWDKHA 75 Query: 43 -RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E K HAE+ AI + + + LY TL PC CA I A I+ + Y Sbjct: 76 DNPLETKFPYVCHAEMNAILN----TNDQDVSGCILYATLFPCNECAKMIIQAGIKEVVY 131 Query: 101 GASNPK 106 + K Sbjct: 132 LCNKSK 137 >gi|116628436|ref|YP_821055.1| late competence protein required for DNA binding and uptake [Streptococcus thermophilus LMD-9] gi|116101713|gb|ABJ66859.1| Deoxycytidylate deaminase [Streptococcus thermophilus LMD-9] gi|312279054|gb|ADQ63711.1| Cytidine/deoxycytidylate deaminase family protein [Streptococcus thermophilus ND03] Length = 151 Score = 66.9 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 45/122 (36%), Gaps = 18/122 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V + +II+ N D T HAE+ A+ + Sbjct: 29 VGAVLVKDKRIIATGYNGGVSEADNCNEVGHYMEDGHCIRTVHAEMNALIQCAKEGIST- 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY-GASNPKGGGIENGTQFYTLATCHHSPEIY 129 ++YVT PC C A+ A + ++ Y P IE Q H PE++ Sbjct: 88 -KNTEIYVTHFPCINCTKALLQAGVVKITYKANYRPHAFAIELMEQKGVSYVQHDVPEVH 146 Query: 130 PG 131 G Sbjct: 147 LG 148 >gi|209734934|gb|ACI68336.1| Deoxycytidylate deaminase [Salmo salar] Length = 196 Score = 66.9 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 43/119 (36%), Gaps = 31/119 (26%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRNRELKD-------VTA- 52 + FM+ A AQ + P VGA V NKI+ N D +A Sbjct: 34 DYFMAVAFLSAQRSKD----PSSQVGACIVNRENKIVGIGYNGMPNGCDDDLLPWSCSAN 89 Query: 53 -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + Y Sbjct: 90 DRLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKDVIY 144 >gi|295706661|ref|YP_003599736.1| ComE operon protein [Bacillus megaterium DSM 319] gi|37650595|emb|CAD69019.1| ComEB protein [Bacillus megaterium] gi|294804320|gb|ADF41386.1| ComE operon protein [Bacillus megaterium DSM 319] Length = 188 Score = 66.9 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------D 49 + FM+ + A + + VGA V + +II+ N + D Sbjct: 4 ISWDQYFMAQSHLLALRSTCER-LAVGATVVRDKRIIAGGYNGSISGGVHCADEGCYVID 62 Query: 50 V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ + + + ++YVT PC C A+ A I+ +YY Sbjct: 63 GHCVRTVHAEVNALLQCAKFGVKT--EDAEVYVTHFPCLNCCKALIQAGIKTVYYA 116 >gi|327313504|ref|YP_004328941.1| putative dCMP deaminase [Prevotella denticola F0289] gi|326946111|gb|AEA21996.1| putative dCMP deaminase [Prevotella denticola F0289] Length = 170 Score = 66.9 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 40/110 (36%), Gaps = 15/110 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE------------LKDVT 51 ++ A A+N+ + VGA+ V N IIS N K Sbjct: 25 DYRYLRMAHIWAENSYCKR-RQVGALVVKNKMIISDGYNGTPSGFENVCEDEAGVTKSYV 83 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE AI R + LYVT PC CA I A I R+ Y Sbjct: 84 LHAEANAITKLARSGNNS--EGSTLYVTASPCIECAKLIIQAGICRVVYA 131 >gi|268574948|ref|XP_002642453.1| Hypothetical protein CBG06863 [Caenorhabditis briggsae] gi|187033808|emb|CAP27096.1| hypothetical protein CBG_06863 [Caenorhabditis briggsae AF16] Length = 200 Score = 66.9 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 29/121 (23%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNR----------NRE 46 ++K F+ A + + P VG V V N I+S N + Sbjct: 51 LEKHQRFLRMAKVTSLRSKD----PNTQVGCVIVDKENCIVSVGYNGFPIGVDDDVFRWD 106 Query: 47 LKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 +D HAE+ AI + + L + +YVTL PC CA + +R++++Y Sbjct: 107 KEDPEDNKHLYVVHAEMNAIIN--KRCAT--LHDCTVYVTLFPCNKCAQMLIQSRVKKVY 162 Query: 100 Y 100 + Sbjct: 163 F 163 >gi|15900639|ref|NP_345243.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae TIGR4] gi|15902698|ref|NP_358248.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae R6] gi|111657502|ref|ZP_01408246.1| hypothetical protein SpneT_02001292 [Streptococcus pneumoniae TIGR4] gi|116515918|ref|YP_816142.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae D39] gi|148985317|ref|ZP_01818540.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP3-BS71] gi|148989822|ref|ZP_01821116.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP6-BS73] gi|148992405|ref|ZP_01822100.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP9-BS68] gi|148997181|ref|ZP_01824835.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP11-BS70] gi|149003356|ref|ZP_01828245.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP14-BS69] gi|149007622|ref|ZP_01831239.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP18-BS74] gi|149010633|ref|ZP_01832004.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP19-BS75] gi|149020384|ref|ZP_01835276.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP23-BS72] gi|168484853|ref|ZP_02709798.1| ComE operon protein 2 [Streptococcus pneumoniae CDC1873-00] gi|168486764|ref|ZP_02711272.1| ComE operon protein 2 [Streptococcus pneumoniae CDC1087-00] gi|168488412|ref|ZP_02712611.1| ComE operon protein 2 [Streptococcus pneumoniae SP195] gi|168490831|ref|ZP_02714974.1| ComE operon protein 2 [Streptococcus pneumoniae CDC0288-04] gi|168492893|ref|ZP_02717036.1| ComE operon protein 2 [Streptococcus pneumoniae CDC3059-06] gi|168575403|ref|ZP_02721339.1| ComE operon protein 2 [Streptococcus pneumoniae MLV-016] gi|169834471|ref|YP_001694207.1| ComE operon protein 2 [Streptococcus pneumoniae Hungary19A-6] gi|182683664|ref|YP_001835411.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae CGSP14] gi|194398250|ref|YP_002037390.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae G54] gi|221231541|ref|YP_002510693.1| cytidine and deoxycytidylate deaminase [Streptococcus pneumoniae ATCC 700669] gi|225854253|ref|YP_002735765.1| ComE operon protein 2 [Streptococcus pneumoniae JJA] gi|225856420|ref|YP_002737931.1| ComE operon protein 2 [Streptococcus pneumoniae P1031] gi|225858555|ref|YP_002740065.1| ComE operon protein 2 [Streptococcus pneumoniae 70585] gi|225860719|ref|YP_002742228.1| ComE operon protein 2 [Streptococcus pneumoniae Taiwan19F-14] gi|237650412|ref|ZP_04524664.1| ComE operon protein 2 [Streptococcus pneumoniae CCRI 1974] gi|237822476|ref|ZP_04598321.1| ComE operon protein 2 [Streptococcus pneumoniae CCRI 1974M2] gi|298230044|ref|ZP_06963725.1| ComE operon protein 2 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255825|ref|ZP_06979411.1| ComE operon protein 2 [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502530|ref|YP_003724470.1| competence protein ComEB [Streptococcus pneumoniae TCH8431/19A] gi|303255840|ref|ZP_07341881.1| putative cytidine and deoxycytidylate deaminase [Streptococcus pneumoniae BS455] gi|303260007|ref|ZP_07345981.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP-BS293] gi|303261413|ref|ZP_07347361.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP14-BS292] gi|303264080|ref|ZP_07350001.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS397] gi|303267618|ref|ZP_07353458.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS457] gi|303269548|ref|ZP_07355312.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS458] gi|307067348|ref|YP_003876314.1| deoxycytidylate deaminase [Streptococcus pneumoniae AP200] gi|307127704|ref|YP_003879735.1| ComE operon protein 2 [Streptococcus pneumoniae 670-6B] gi|14972218|gb|AAK74883.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae TIGR4] gi|15458240|gb|AAK99458.1| dCMP deaminase [Streptococcus pneumoniae R6] gi|116076494|gb|ABJ54214.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae D39] gi|147756881|gb|EDK63921.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP11-BS70] gi|147758539|gb|EDK65537.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP14-BS69] gi|147760777|gb|EDK67748.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP18-BS74] gi|147765114|gb|EDK72043.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP19-BS75] gi|147922515|gb|EDK73634.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP3-BS71] gi|147924764|gb|EDK75848.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP6-BS73] gi|147928722|gb|EDK79735.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP9-BS68] gi|147930686|gb|EDK81668.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP23-BS72] gi|168996973|gb|ACA37585.1| ComE operon protein 2 [Streptococcus pneumoniae Hungary19A-6] gi|172042006|gb|EDT50052.1| ComE operon protein 2 [Streptococcus pneumoniae CDC1873-00] gi|182628998|gb|ACB89946.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae CGSP14] gi|183570286|gb|EDT90814.1| ComE operon protein 2 [Streptococcus pneumoniae CDC1087-00] gi|183573165|gb|EDT93693.1| ComE operon protein 2 [Streptococcus pneumoniae SP195] gi|183574679|gb|EDT95207.1| ComE operon protein 2 [Streptococcus pneumoniae CDC0288-04] gi|183576942|gb|EDT97470.1| ComE operon protein 2 [Streptococcus pneumoniae CDC3059-06] gi|183578400|gb|EDT98928.1| ComE operon protein 2 [Streptococcus pneumoniae MLV-016] gi|194357917|gb|ACF56365.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae G54] gi|220674001|emb|CAR68514.1| putative cytidine and deoxycytidylate deaminase [Streptococcus pneumoniae ATCC 700669] gi|225720156|gb|ACO16010.1| ComE operon protein 2 [Streptococcus pneumoniae 70585] gi|225723766|gb|ACO19619.1| ComE operon protein 2 [Streptococcus pneumoniae JJA] gi|225725327|gb|ACO21179.1| ComE operon protein 2 [Streptococcus pneumoniae P1031] gi|225727835|gb|ACO23686.1| ComE operon protein 2 [Streptococcus pneumoniae Taiwan19F-14] gi|298238125|gb|ADI69256.1| possible competence protein ComEB [Streptococcus pneumoniae TCH8431/19A] gi|301793904|emb|CBW36300.1| putative cytidine and deoxycytidylate deaminase [Streptococcus pneumoniae INV104] gi|301799762|emb|CBW32331.1| putative cytidine and deoxycytidylate deaminase [Streptococcus pneumoniae OXC141] gi|301801592|emb|CBW34290.1| putative cytidine and deoxycytidylate deaminase [Streptococcus pneumoniae INV200] gi|302597224|gb|EFL64329.1| putative cytidine and deoxycytidylate deaminase [Streptococcus pneumoniae BS455] gi|302637547|gb|EFL68034.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP14-BS292] gi|302638926|gb|EFL69387.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae SP-BS293] gi|302640933|gb|EFL71316.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS458] gi|302642848|gb|EFL73155.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS457] gi|302646485|gb|EFL76711.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus pneumoniae BS397] gi|306408885|gb|ADM84312.1| Deoxycytidylate deaminase [Streptococcus pneumoniae AP200] gi|306484766|gb|ADM91635.1| ComE operon protein 2 [Streptococcus pneumoniae 670-6B] gi|327390102|gb|EGE88445.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae GA04375] gi|332073130|gb|EGI83609.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae GA17570] gi|332076024|gb|EGI86490.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae GA41301] gi|332077161|gb|EGI87623.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae GA17545] gi|332202609|gb|EGJ16678.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae GA41317] gi|332203899|gb|EGJ17966.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae GA47368] gi|332204754|gb|EGJ18819.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae GA47901] Length = 155 Score = 66.9 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGN--------------RN 44 F + AL A + A VGA+ V +NK+IS N Sbjct: 9 DEYFAAQALLIANRSTCKRAK------VGAILVKDNKVISTGYNGSVSGTEHCIDHECLV 62 Query: 45 RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E V T HAE+ AI G + YVT PC C + +R+ Y Sbjct: 63 IEGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116 >gi|260770055|ref|ZP_05878988.1| putative deoxycytidylate deaminase [Vibrio furnissii CIP 102972] gi|260615393|gb|EEX40579.1| putative deoxycytidylate deaminase [Vibrio furnissii CIP 102972] gi|315182578|gb|ADT89491.1| deoxycytidylate deaminase, hypothetical [Vibrio furnissii NCTC 11218] Length = 154 Score = 66.9 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN---------RNRELKDV----TAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N N + +D+ T HAE AI R L Sbjct: 27 VGAVITKQNRIVSVGFNGYPHGISDSANTDDRDMKYLKTLHAEENAILFAKR-----DLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 ++YVT PC CAA I I + Sbjct: 82 GCEIYVTHFPCPNCAAKIIQTGISAV 107 >gi|260774273|ref|ZP_05883188.1| putative deoxycytidylate deaminase [Vibrio metschnikovii CIP 69.14] gi|260611234|gb|EEX36438.1| putative deoxycytidylate deaminase [Vibrio metschnikovii CIP 69.14] Length = 157 Score = 66.9 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN---------RNRELKDV----TAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N N + +D+ T HAE AI R L Sbjct: 27 VGAVITKQNRIVSVGFNGYPHGISDSANTDDRDMKYLKTLHAEENAILFAKR-----DLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 ++YVT PC CAA I I + Sbjct: 82 GCEIYVTHFPCPNCAAKIIQTGISAV 107 >gi|55821713|ref|YP_140155.1| late competence protein required for DNA binding and uptake [Streptococcus thermophilus LMG 18311] gi|55823633|ref|YP_142074.1| late competence protein required for DNA binding and uptake [Streptococcus thermophilus CNRZ1066] gi|55737698|gb|AAV61340.1| late competence protein required for DNA binding and uptake [Streptococcus thermophilus LMG 18311] gi|55739618|gb|AAV63259.1| late competence protein required for DNA binding and uptake [Streptococcus thermophilus CNRZ1066] Length = 156 Score = 66.9 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 45/122 (36%), Gaps = 18/122 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGAV V + +II+ N D T HAE+ A+ + Sbjct: 34 VGAVLVKDKRIIATGYNGGVSEADNCNEVGHYMEDGHCIRTVHAEMNALIQCAKEGIST- 92 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY-GASNPKGGGIENGTQFYTLATCHHSPEIY 129 ++YVT PC C A+ A + ++ Y P IE Q H PE++ Sbjct: 93 -KNTEIYVTHFPCINCTKALLQAGVVKITYKANYRPHAFAIELMEQKGVSYVQHDVPEVH 151 Query: 130 PG 131 G Sbjct: 152 LG 153 >gi|256028497|ref|ZP_05442331.1| deoxycytidylate deaminase [Fusobacterium sp. D11] gi|289766417|ref|ZP_06525795.1| deoxycytidylate deaminase [Fusobacterium sp. D11] gi|289717972|gb|EFD81984.1| deoxycytidylate deaminase [Fusobacterium sp. D11] Length = 161 Score = 66.9 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 45/122 (36%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKD------- 49 + + FM A+ + + P VGA V +K I+ N + D Sbjct: 6 INWDSYFMGIAILSSMRSKD----PNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWE 61 Query: 50 ----------V-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ AI + S + L + +YV L PC C AI + I+ + Sbjct: 62 RDGEFLNTKYPYVCHAELNAI-----LNSIKSLKDCIIYVALFPCHECTKAIIQSGIKEI 116 Query: 99 YY 100 Y Sbjct: 117 VY 118 >gi|229135152|ref|ZP_04263952.1| ComE operon protein 2 [Bacillus cereus BDRD-ST196] gi|228648280|gb|EEL04315.1| ComE operon protein 2 [Bacillus cereus BDRD-ST196] Length = 188 Score = 66.9 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + ++ Sbjct: 31 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 ++YVT PC C AI + + +YY Sbjct: 90 -EGAEIYVTHFPCLQCCKAIIQSGVTAVYYA 119 >gi|19705207|ref|NP_602702.1| deoxycytidylate deaminase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296329061|ref|ZP_06871566.1| deoxycytidylate deaminase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19713154|gb|AAL94001.1| Deoxycytidylate deaminase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296153780|gb|EFG94593.1| deoxycytidylate deaminase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 174 Score = 66.9 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 45/122 (36%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKD------- 49 + + FM A+ + + P VGA V +K I+ N + D Sbjct: 19 INWDSYFMGIAILSSMRSKD----PNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWQ 74 Query: 50 ----------V-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ AI + S + L + +YV L PC C AI + I+ + Sbjct: 75 RDGEFLNTKYPYVCHAELNAI-----LNSIKSLKDCIIYVALFPCHECTKAIIQSGIKEI 129 Query: 99 YY 100 Y Sbjct: 130 VY 131 >gi|303320721|ref|XP_003070358.1| Cytidine and deoxycytidylate deaminase zinc-binding domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240110048|gb|EER28213.1| Cytidine and deoxycytidylate deaminase zinc-binding domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 345 Score = 66.9 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 37/122 (30%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--RNRELK----------- 48 FM A AQ + R VG V V + +++S N Sbjct: 182 DEYFMQLASLAAQRSNCMKRR---VGCVLVKDRRVMSTGYNGTARNTRNCNQGGCPRCNL 238 Query: 49 -DVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 TA HAE A+ R E LY PC C+ I+ I + Sbjct: 239 VQGTAQALSTCLCLHAEENALLEAGRERIGE---GCILYCNTCPCLTCSVKIAQLGISEV 295 Query: 99 YY 100 Y Sbjct: 296 VY 297 >gi|227503568|ref|ZP_03933617.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Corynebacterium accolens ATCC 49725] gi|227075604|gb|EEI13567.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Corynebacterium accolens ATCC 49725] Length = 344 Score = 66.9 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 22/108 (20%) Query: 11 ALEEAQNAAL--RN----EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 AL +A A R PVGAV + ++ + AHAE++A+R Sbjct: 13 ALLQAMQAGAAVRGTTSPNPPVGAVILSATGAVVGIGATQPVGG----AHAEVMALRAAG 68 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 VTLEPC CA A+ A I R++Y +P Sbjct: 69 EKA-----RGGTAVVTLEPCAHTGRTGPCATALIDAGIARVFYLHPDP 111 >gi|294781966|ref|ZP_06747298.1| deoxycytidylate deaminase [Fusobacterium sp. 1_1_41FAA] gi|294481777|gb|EFG29546.1| deoxycytidylate deaminase [Fusobacterium sp. 1_1_41FAA] Length = 160 Score = 66.9 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 46/122 (37%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------R 43 + + FM AL + + P VGA V +K I+ N Sbjct: 6 IDWDSYFMGIALLSSMRSKD----PNTQVGACIVNEDKRIVGVGYNGLPKGCEDTDFPWE 61 Query: 44 NR----ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 E K HAE+ AI + S + L + +YV L PC C+ AI + I+ + Sbjct: 62 REGDFLETKYPYVCHAELNAI-----LNSIKSLKDCIIYVALFPCNECSKAIIQSGIKEI 116 Query: 99 YY 100 Y Sbjct: 117 VY 118 >gi|238859561|ref|NP_001013904.2| deoxycytidylate deaminase isoform 1 [Rattus norvegicus] gi|149021459|gb|EDL78922.1| similar to 6030466N05Rik protein, isoform CRA_a [Rattus norvegicus] gi|149021460|gb|EDL78923.1| similar to 6030466N05Rik protein, isoform CRA_a [Rattus norvegicus] Length = 184 Score = 66.9 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 42/119 (35%), Gaps = 31/119 (26%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-RNRELKD------VTA- 52 FM+ A AQ + P VGA V NKI+ N D TA Sbjct: 23 EYFMAVAFLSAQRSKD----PSSQVGACIVNTENKIVGIGYNGMPNGCSDDLLPWRRTAE 78 Query: 53 -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 79 NKLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIF 133 >gi|238859570|ref|NP_848903.2| deoxycytidylate deaminase [Mus musculus] gi|238859573|ref|NP_001154987.1| deoxycytidylate deaminase [Mus musculus] gi|238859575|ref|NP_001154988.1| deoxycytidylate deaminase [Mus musculus] gi|148703670|gb|EDL35617.1| dCMP deaminase, isoform CRA_a [Mus musculus] gi|148703671|gb|EDL35618.1| dCMP deaminase, isoform CRA_a [Mus musculus] Length = 184 Score = 66.9 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 42/119 (35%), Gaps = 31/119 (26%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-RNRELKD------VTA- 52 FM+ A AQ + P VGA V NKI+ N D TA Sbjct: 23 EYFMAVAFLSAQRSKD----PSSQVGACIVNTENKIVGIGYNGMPNGCSDDLLPWRRTAE 78 Query: 53 -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 79 NKLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIF 133 >gi|62286456|sp|Q5M9G0|DCTD_RAT RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP deaminase gi|62286567|sp|Q8K2D6|DCTD_MOUSE RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP deaminase gi|21619349|gb|AAH31719.1| Dctd protein [Mus musculus] gi|26327497|dbj|BAC27492.1| unnamed protein product [Mus musculus] gi|26333023|dbj|BAC30229.1| unnamed protein product [Mus musculus] gi|56540886|gb|AAH87138.1| DCMP deaminase [Rattus norvegicus] Length = 178 Score = 66.9 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 42/119 (35%), Gaps = 31/119 (26%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-RNRELKD------VTA- 52 FM+ A AQ + P VGA V NKI+ N D TA Sbjct: 17 EYFMAVAFLSAQRSKD----PSSQVGACIVNTENKIVGIGYNGMPNGCSDDLLPWRRTAE 72 Query: 53 -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 73 NKLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127 >gi|26346577|dbj|BAC36937.1| unnamed protein product [Mus musculus] Length = 178 Score = 66.9 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 42/119 (35%), Gaps = 31/119 (26%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-RNRELKD------VTA- 52 FM+ A AQ + P VGA V NKI+ N D TA Sbjct: 17 EYFMAVAFLSAQRSKD----PSFQVGACIVNTENKIVGIGYNGMPNGCSDDLLPWRRTAE 72 Query: 53 -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 73 NKLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127 >gi|302392959|ref|YP_003828779.1| CMP/dCMP deaminase zinc-binding protein [Acetohalobium arabaticum DSM 5501] gi|302205036|gb|ADL13714.1| CMP/dCMP deaminase zinc-binding protein [Acetohalobium arabaticum DSM 5501] Length = 159 Score = 66.9 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 41/128 (32%), Gaps = 30/128 (23%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNR--------------NREL 47 FM A+ + R VGA+ V ++++ N E Sbjct: 18 DQYFMELTSVVAKRSTCLRRK---VGALLVKEGRVLATGYNGAPSGLKHCSETGCIREER 74 Query: 48 KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + HAE AI L + LY T +PC +CA I A I + Sbjct: 75 NIPSGQRHELCRGLHAEQNAIIQAA--LHGTSIDGATLYCTHQPCVVCAKMIINAGIDEI 132 Query: 99 YYGASNPK 106 G S P Sbjct: 133 IIGGSYPD 140 >gi|33593884|ref|NP_881528.1| putative riboflavin-specific deaminase [Bordetella pertussis Tohama I] gi|33563958|emb|CAE43220.1| putative riboflavin-specific deaminase [Bordetella pertussis Tohama I] gi|332383303|gb|AEE68150.1| putative riboflavin-specific deaminase [Bordetella pertussis CS] Length = 386 Score = 66.9 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 18/151 (11%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 ++ AL A++ P VG V V + +++ + HAE+ A+ Sbjct: 7 TDDVSWIRRALALARSVMYSTAPNPRVGCVIVRDGQVLGEGATQPPGG----PHAEVCAL 62 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 R + L +YVTLEPC C A+ A R+ +P G Sbjct: 63 REAAARGAS--LAGATVYVTLEPCSHFGRTPPCVDALVAAAPARVVVAMGDPNPRVNGQG 120 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 A + + + ++ F Sbjct: 121 LARLRAAG----IAVTEDVCRDEALELNAGF 147 >gi|289807868|ref|ZP_06538497.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 111 Score = 66.9 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 17/97 (17%) Query: 3 KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL+ AQ + P VG V V N I+ + HAE+ A+R Sbjct: 2 QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAIS 91 M YVTLEPC C A+ Sbjct: 58 MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALI 89 >gi|28901047|ref|NP_800702.1| putative deoxycytidylate deaminase [Vibrio parahaemolyticus RIMD 2210633] gi|260362476|ref|ZP_05775409.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030] gi|260879896|ref|ZP_05892251.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Vibrio parahaemolyticus AN-5034] gi|260894571|ref|ZP_05903067.1| protein RibG [Vibrio parahaemolyticus Peru-466] gi|28809560|dbj|BAC62535.1| putative deoxycytidylate deaminase [Vibrio parahaemolyticus RIMD 2210633] gi|308086410|gb|EFO36105.1| protein RibG [Vibrio parahaemolyticus Peru-466] gi|308091689|gb|EFO41384.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein [Vibrio parahaemolyticus AN-5034] gi|308113341|gb|EFO50881.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030] Length = 154 Score = 66.9 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N T HAE AI + S+ L Sbjct: 27 VGAVITNQNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 D++VT PC CAA I I R+ Sbjct: 82 GCDIWVTHFPCPNCAAKIIQTGISRV 107 >gi|302773850|ref|XP_002970342.1| hypothetical protein SELMODRAFT_171495 [Selaginella moellendorffii] gi|300161858|gb|EFJ28472.1| hypothetical protein SELMODRAFT_171495 [Selaginella moellendorffii] Length = 378 Score = 66.9 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 18/127 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEIL 57 ++ + +M +E A+ R P VG + V N +I+ R + HAE+ Sbjct: 25 LRDDSDYMRQCVELARRGLGRTSPNPMVGCLIVDNAGEIVGRGFHPRAGE----PHAEVF 80 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+R YV+LEPC C+ A+ AR+RR+ G +P Sbjct: 81 ALREAGSKAH-----GSTAYVSLEPCDHVGRTPPCSRALVAARVRRVVVGTVDPNPLVAG 135 Query: 112 NGTQFYT 118 G + Sbjct: 136 KGVERLR 142 >gi|197119397|ref|YP_002139824.1| deoxycytidylate deaminase [Geobacter bemidjiensis Bem] gi|253699854|ref|YP_003021043.1| dCMP deaminase [Geobacter sp. M21] gi|197088757|gb|ACH40028.1| deoxycytidylate deaminase [Geobacter bemidjiensis Bem] gi|251774704|gb|ACT17285.1| dCMP deaminase [Geobacter sp. M21] Length = 151 Score = 66.9 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 27/104 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGAV V + I++ N ++ + HAE AI Sbjct: 28 VGAVLVKDKNILATGYNGAPSGTAHCLDIGCLREKMGIPSGERHELCRGLHAEQNAIIQA 87 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASN 104 + + + LY PC +C+ + + I+R+ Y G + Sbjct: 88 AKHGTS--IEGATLYCNTMPCIICSKMVINSGIKRVVYLSGYPD 129 >gi|42518285|ref|NP_964215.1| ComE operon protein 2. [Lactobacillus johnsonii NCC 533] gi|227888945|ref|ZP_04006750.1| competence protein ComEB [Lactobacillus johnsonii ATCC 33200] gi|41582569|gb|AAS08181.1| ComE operon protein 2 [Lactobacillus johnsonii NCC 533] gi|227850533|gb|EEJ60619.1| competence protein ComEB [Lactobacillus johnsonii ATCC 33200] gi|329666595|gb|AEB92543.1| dCMP deaminase [Lactobacillus johnsonii DPC 6026] Length = 162 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 23/120 (19%) Query: 1 MKKG-----NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV- 50 M + FM AL AQ + + VG+V V ++++I+ N + + DV Sbjct: 1 MTRDRIPWKQYFMMQALVIAQRSTCDRAL-VGSVLVKDDRMIATGYNGSVSGQPHCDDVG 59 Query: 51 ----------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H+E+ A+ + ++YVT PC C+ + A I+++ Y Sbjct: 60 HLMVDGHCVRTIHSEMNALIQCAKNGIST--EGTEIYVTYFPCFNCSKCLVQAGIKKINY 117 >gi|218680824|ref|ZP_03528721.1| putative purine deaminase protein [Rhizobium etli CIAT 894] Length = 91 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 5/80 (6%) Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG-IENGTQFYTLATCHHSPEIY 129 L + LY + EPC MC+ AI + I + + S + G G + A I Sbjct: 5 LADCTLYTSTEPCAMCSGAIYWSGIGHMVFACSETRLGEMAGVGLNVPSRAVLQTGARIV 64 Query: 130 PGI----SEQRSRQIIQDFF 145 + E + + Q+F+ Sbjct: 65 TVVGPTNLEDEAATVHQEFW 84 >gi|257076159|ref|ZP_05570520.1| deaminase [Ferroplasma acidarmanus fer1] Length = 172 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 48/160 (30%), Gaps = 38/160 (23%) Query: 4 GNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGN------------------ 42 FM A A + + VGAV V +N +++ N Sbjct: 11 DEYFMRMAYLAASRSNCTRRK----VGAVIVRDNNVLATGYNGPPSHTVNCDIVGCIRDE 66 Query: 43 ------RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96 EL HAE AI ++ + +YVT PC +C+ I + I Sbjct: 67 LNVPSGERHELCRGL-HAEQNAIIQAA--VNGSSIKGSKIYVTTHPCVVCSKMIMNSSIE 123 Query: 97 RLYYGASNPKGGG----IENGTQFYTLATCHHSPEIYPGI 132 + + P +E+ E GI Sbjct: 124 EIIFAEGYPDDLAELMLLESNITIRKFNLPDPEVESIIGI 163 >gi|322385723|ref|ZP_08059367.1| competence protein comEB [Streptococcus cristatus ATCC 51100] gi|321270461|gb|EFX53377.1| competence protein comEB [Streptococcus cristatus ATCC 51100] Length = 156 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRELK---------- 48 F + AL A + A VGAV V +NK+IS N + Sbjct: 10 DEYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 63 Query: 49 -DV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D T HAE+ AI G + YVT PC C + +R+ Y Sbjct: 64 IDGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 117 >gi|312197775|ref|YP_004017836.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c] gi|311229111|gb|ADP81966.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c] Length = 205 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 47/153 (30%), Gaps = 20/153 (13%) Query: 8 MSCALEEAQNAALRN-EIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A P AV +I + N + + HAE++A+ Sbjct: 41 MRLVHRLADRNHREGHGGPFAAVVASPDTGEIHAAGVNLVLDTGLSSMHAEVVALSFAQA 100 Query: 65 ILSQEILPEV----DLYVTLEPCTMCAAAISLARIRRLYY-GASNPKGGGIENGTQFYTL 119 L + L +L V PC MC A + ++ L G+ + IE T F Sbjct: 101 RLGRWDLSAAGTPVELVVNWRPCVMCYGATMWSGVQLLTIAGSGDE----IETLTGFDEG 156 Query: 120 A--------TCHHSPEIYPGISEQRSRQIIQDF 144 + I + ++ D+ Sbjct: 157 PMREDWAEQFAGRGITVRTDILRDEALKVFADY 189 >gi|61742819|ref|NP_001912.2| deoxycytidylate deaminase isoform b [Homo sapiens] gi|114597027|ref|XP_001160760.1| PREDICTED: similar to DCMP deaminase isoform 3 [Pan troglodytes] gi|114597029|ref|XP_001160671.1| PREDICTED: deoxycytidylate deaminase isoform 2 [Pan troglodytes] gi|114597031|ref|XP_001160617.1| PREDICTED: similar to DCMP deaminase isoform 1 [Pan troglodytes] gi|23503055|sp|P32321|DCTD_HUMAN RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP deaminase gi|886280|gb|AAC37579.1| deoxycytidylate deaminase [Homo sapiens] gi|119625105|gb|EAX04700.1| dCMP deaminase, isoform CRA_c [Homo sapiens] gi|119625106|gb|EAX04701.1| dCMP deaminase, isoform CRA_c [Homo sapiens] gi|189053781|dbj|BAG36033.1| unnamed protein product [Homo sapiens] Length = 178 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52 FM+ A AQ + N VGA V NKI+ N D TA Sbjct: 17 EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKL 75 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 76 DTKYPYVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127 >gi|294142299|ref|YP_003558277.1| deoxycytidylate deaminase [Shewanella violacea DSS12] gi|293328768|dbj|BAJ03499.1| deoxycytidylate deaminase, putative [Shewanella violacea DSS12] Length = 148 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV +N+I+S N T HAE AI R L Sbjct: 26 VGAVITEDNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILYAKR-----DLS 80 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I + + Sbjct: 81 GCEIWVTHFPCPNCAAKIIQTGLSTV 106 >gi|167625262|ref|YP_001675556.1| zinc-binding CMP/dCMP deaminase [Shewanella halifaxensis HAW-EB4] gi|167355284|gb|ABZ77897.1| CMP/dCMP deaminase zinc-binding [Shewanella halifaxensis HAW-EB4] Length = 143 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV +N+I+S N T HAE AI R L Sbjct: 27 VGAVITEDNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILYAKR-----DLS 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I + + Sbjct: 82 GCEIWVTHFPCPNCAAKIIQTGLSTV 107 >gi|163748467|ref|ZP_02155721.1| putative deoxycytidylate deaminase [Shewanella benthica KT99] gi|161332045|gb|EDQ02722.1| putative deoxycytidylate deaminase [Shewanella benthica KT99] Length = 149 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV +N+I+S N T HAE AI R L Sbjct: 27 VGAVITEDNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILYAKR-----DLS 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I + + Sbjct: 82 GCEIWVTHFPCPNCAAKIIQTGLSTV 107 >gi|157963093|ref|YP_001503127.1| zinc-binding CMP/dCMP deaminase [Shewanella pealeana ATCC 700345] gi|157848093|gb|ABV88592.1| CMP/dCMP deaminase zinc-binding [Shewanella pealeana ATCC 700345] Length = 144 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV +N+I+S N T HAE AI R L Sbjct: 27 VGAVITEDNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILYAKR-----DLS 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I + + Sbjct: 82 GCEIWVTHFPCPNCAAKIIQTGLSTV 107 >gi|322376947|ref|ZP_08051440.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus sp. M334] gi|321282754|gb|EFX59761.1| cytidine and deoxycytidylate deaminase family protein [Streptococcus sp. M334] Length = 155 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGN--------------RN 44 F + AL A + A VGA+ V +NK+IS N Sbjct: 9 DEYFAAQALLIANRSTCKRAK------VGAILVKDNKVISTGYNGSVSGTEHCIDHECLV 62 Query: 45 RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E V T HAE+ AI G + YVT PC C + +R+ Y Sbjct: 63 IEGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116 >gi|261212850|ref|ZP_05927134.1| deoxycytidylate deaminase [Vibrio sp. RC341] gi|260837915|gb|EEX64592.1| deoxycytidylate deaminase [Vibrio sp. RC341] Length = 161 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN---------RNRELKDV----TAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N + + +D+ T HAE AI R L Sbjct: 27 VGAVITKQNRIVSVGFNGYPHGISDSASTDDRDMKYLKTLHAEENAILFAKR-----DLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 ++YVT PC CAA I I + Sbjct: 82 GCEIYVTHFPCPNCAAKIIQTGIAAV 107 >gi|327301817|ref|XP_003235601.1| deoxycytidylate deaminase [Trichophyton rubrum CBS 118892] gi|326462953|gb|EGD88406.1| deoxycytidylate deaminase [Trichophyton rubrum CBS 118892] Length = 348 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 37/122 (30%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50 FM A AQ + R VG V V +N+++S N E Sbjct: 187 DQYFMQLASLAAQRSNCMKRR---VGCVIVKDNRVMSTGYNGTPRNMKNCNEGGCPRCNL 243 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE A+ R E LY PC C+ I+ I + Sbjct: 244 GQAGGTVLSTCLCMHAEENALLEAGRQRIGE---GSILYCDTCPCLTCSVKIAQLGISEV 300 Query: 99 YY 100 Y Sbjct: 301 VY 302 >gi|50312303|ref|XP_456184.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49645320|emb|CAG98892.1| KLLA0F24794p [Kluyveromyces lactis] Length = 597 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 22/151 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 ++ FM A++EA+N E VGA+ V I+S +R HAE Sbjct: 442 IEPHRKFMELAIDEARN---CGETQTAFNVGALLVNGTDILSTGYSRELPGN---THAEQ 495 Query: 57 LAIRMGCRILSQEILPEVD-LYVTLEPC-------TMCAAAISLA--RIRRLYYGASNPK 106 A+ LP+ +Y T+EPC C I I+ ++ G P Sbjct: 496 CALDKYFTKSEGAKLPDGTIIYTTMEPCSLRLSGNLPCVDRIIQTTGAIKTVFVGVMEPD 555 Query: 107 GGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 ++N T ++ LA + PG E+ Sbjct: 556 I-FVKNNTSYHKLAQYGIDYILIPGY-EEEC 584 >gi|307708898|ref|ZP_07645358.1| comE operon protein 2 [Streptococcus mitis SK564] gi|307620234|gb|EFN99350.1| comE operon protein 2 [Streptococcus mitis SK564] Length = 155 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGN--------------RN 44 F + AL A + A VGA+ V +NK+IS N Sbjct: 9 DEYFAAQALLIANRSTCKRAK------VGAILVKDNKVISTGYNGSVSGTEHCIDHECLV 62 Query: 45 RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E V T HAE+ AI G + YVT PC C + +R+ Y Sbjct: 63 IEGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116 >gi|295093723|emb|CBK82814.1| Deoxycytidylate deaminase [Coprococcus sp. ART55/1] Length = 159 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 43/122 (35%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRNRELKD------- 49 + FM A+ A+ + P VGA V NN+I+S N D Sbjct: 7 ISWDQYFMGIAMMSAERSKD----PSTQVGACIVDKNNRILSMGYNGMPAGCDDDTMPWG 62 Query: 50 ----VTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ +I L + +Y TL PC CA AI I+ + Sbjct: 63 KSGAPLDNKYFYVCHAELNSILN----YRGGNLKDAIIYSTLFPCNECAKAIIQCGIKEV 118 Query: 99 YY 100 Y Sbjct: 119 VY 120 >gi|116628878|ref|YP_814050.1| deoxycytidylate deaminase [Lactobacillus gasseri ATCC 33323] gi|238852844|ref|ZP_04643249.1| ComE operon protein 2 [Lactobacillus gasseri 202-4] gi|268318770|ref|YP_003292426.1| hypothetical protein FI9785_275 [Lactobacillus johnsonii FI9785] gi|282852543|ref|ZP_06261885.1| putative ComE operon protein 2 [Lactobacillus gasseri 224-1] gi|300362471|ref|ZP_07058647.1| competence protein ComEB [Lactobacillus gasseri JV-V03] gi|116094460|gb|ABJ59612.1| Deoxycytidylate deaminase [Lactobacillus gasseri ATCC 33323] gi|238834538|gb|EEQ26770.1| ComE operon protein 2 [Lactobacillus gasseri 202-4] gi|262397145|emb|CAX66159.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785] gi|282556285|gb|EFB61905.1| putative ComE operon protein 2 [Lactobacillus gasseri 224-1] gi|300353462|gb|EFJ69334.1| competence protein ComEB [Lactobacillus gasseri JV-V03] Length = 162 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 23/120 (19%) Query: 1 MKKG-----NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV- 50 M + FM AL AQ + + VG+V V ++++I+ N + + DV Sbjct: 1 MTRDRIPWKQYFMMQALVIAQRSTCDRAL-VGSVLVKDDRMIATGYNGSVSGQPHCDDVG 59 Query: 51 ----------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H+E+ A+ + ++YVT PC C+ + A I+++ Y Sbjct: 60 HLMVDGHCVRTIHSEMNALIQCAKNGIST--EGTEIYVTYFPCFNCSKCLVQAGIKKINY 117 >gi|326474735|gb|EGD98744.1| deoxycytidylate deaminase [Trichophyton tonsurans CBS 112818] gi|326484864|gb|EGE08874.1| deoxycytidylate deaminase [Trichophyton equinum CBS 127.97] Length = 348 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 37/122 (30%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50 FM A AQ + R VG V V +N+++S N E Sbjct: 187 DQYFMQLASLAAQRSNCMKRR---VGCVIVKDNRVMSTGYNGTPRNMKNCNEGGCPRCNL 243 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE A+ R E LY PC C+ I+ I + Sbjct: 244 GQAGGTVLSTCLCMHAEENALLEAGRQRIGE---GSILYCDTCPCLTCSVKIAQLGISEV 300 Query: 99 YY 100 Y Sbjct: 301 VY 302 >gi|150021636|ref|YP_001306990.1| CMP/dCMP deaminase, zinc-binding [Thermosipho melanesiensis BI429] gi|149794157|gb|ABR31605.1| CMP/dCMP deaminase, zinc-binding [Thermosipho melanesiensis BI429] Length = 170 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 26/120 (21%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR--------------NRELKD 49 F+ +L A + VGA+ V + +I+S N+ +L+ Sbjct: 23 DEYFLRISLIIASRSTCI-HRKVGALIVKDKRILSTGYNQPPSGFPHCNNIPCIRDDLRI 81 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE A+ + +Y+T +PC++CA I A I+R+ + Sbjct: 82 PSGKNQEICYALHAEQNALMQAAKFGISTN--NSTMYITHKPCSVCARLIINAGIKRVVF 139 >gi|325119282|emb|CBZ54836.1| putative cytidine and deoxycytidylate deaminase zinc-binding region domain-containing protein [Neospora caninum Liverpool] Length = 693 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Query: 66 LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 +Y + EPC +CA A+ +RI+ L + N GGI G + + +H Sbjct: 616 DGNYYCQGCVVYCSHEPCVLCAMALIHSRIKLLVFAHDNKVHGGITRG-RLHLDRRLNHG 674 Query: 126 PEI 128 + Sbjct: 675 YRV 677 >gi|320037881|gb|EFW19817.1| deoxycytidylate deaminase [Coccidioides posadasii str. Silveira] Length = 352 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 37/122 (30%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--RNRELK----------- 48 FM A AQ + R VG V V + +++S N Sbjct: 189 DEYFMQLASLAAQRSNCMKRR---VGCVLVKDRRVMSTGYNGTARNTRNCNQGGCPRCNL 245 Query: 49 -DVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 TA HAE A+ R E LY PC C+ I+ I + Sbjct: 246 VQGTAQALSTCLCLHAEENALLEAGRERIGE---GCILYCNTCPCLTCSVKIAQLGISEV 302 Query: 99 YY 100 Y Sbjct: 303 VY 304 >gi|302769374|ref|XP_002968106.1| hypothetical protein SELMODRAFT_169709 [Selaginella moellendorffii] gi|300163750|gb|EFJ30360.1| hypothetical protein SELMODRAFT_169709 [Selaginella moellendorffii] Length = 375 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 18/127 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEIL 57 ++ + +M +E A+ R P VG + V N +I+ R + HAE+ Sbjct: 22 LRDDSDYMRQCVELARRGLGRTSPNPMVGCLIVDNAGEIVGRGFHPRAGE----PHAEVF 77 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 A+R YV+LEPC C+ A+ AR+RR+ G +P Sbjct: 78 ALREAGSKAH-----GSTAYVSLEPCDHVGRTPPCSRALVAARVRRVVVGTVDPNPLVAG 132 Query: 112 NGTQFYT 118 G + Sbjct: 133 KGVERLR 139 >gi|296333283|ref|ZP_06875736.1| putative enzyme associated to DNA transport (competence) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675213|ref|YP_003866885.1| hypothetical protein BSUW23_12690 [Bacillus subtilis subsp. spizizenii str. W23] gi|296149481|gb|EFG90377.1| putative enzyme associated to DNA transport (competence) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413457|gb|ADM38576.1| putative enzyme associated with DNA transport (competence) [Bacillus subtilis subsp. spizizenii str. W23] Length = 189 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 25/125 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRE----------- 46 + FM+ + A + P VGA V + ++I+ N + Sbjct: 4 ISWNQYFMAQSHLLALRSTC----PRLSVGATIVRDKRMIAGGYNGSIAGGVHCADEGCL 59 Query: 47 ----LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 T HAE+ AI + ++YVT PC C +I A I+ +YY A Sbjct: 60 MIDDHCARTIHAEMNAILQCSKFGVPTD--GAEIYVTHYPCIQCCKSIIQAGIKTVYY-A 116 Query: 103 SNPKG 107 + K Sbjct: 117 EDYKT 121 >gi|294501314|ref|YP_003565014.1| ComE operon protein [Bacillus megaterium QM B1551] gi|294351251|gb|ADE71580.1| ComE operon protein [Bacillus megaterium QM B1551] Length = 188 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------D 49 + FM+ + A + + VGA V + +II+ N + D Sbjct: 4 ISWDQYFMAQSHLLALRSTCER-LAVGATVVRDKRIIAGGYNGSISGGVHCADEGCYVID 62 Query: 50 V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAE+ A+ + + + ++YVT PC C A+ A I+ +YY Sbjct: 63 GHCVRTVHAEVNALLQCAKFGVKT--EDAEVYVTHFPCLNCCKALIQAGIKTVYYA 116 >gi|315641043|ref|ZP_07896126.1| ComE operon protein ComEB [Enterococcus italicus DSM 15952] gi|315483212|gb|EFU73725.1| ComE operon protein ComEB [Enterococcus italicus DSM 15952] Length = 165 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 20/113 (17%) Query: 4 GNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRE---------------L 47 FM+ A+ + + R E VGA V +II+ N + Sbjct: 9 DQYFMAQAVLLSLRSTCTRLE--VGATLVKEKRIIAGGYNGSVSGDTHCIDEGCAMVDGH 66 Query: 48 KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ + ++YVT PC C +I A I++++Y Sbjct: 67 CIRTIHAEMNALLQCAKFGISTN--GAEIYVTHFPCLQCTKSILQAGIKKIHY 117 >gi|225866307|ref|YP_002751685.1| ComE operon protein 2 [Bacillus cereus 03BB102] gi|225787758|gb|ACO27975.1| ComE operon protein 2 [Bacillus cereus 03BB102] Length = 185 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + + Sbjct: 28 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 87 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 116 >gi|206602767|gb|EDZ39248.1| Riboflavin biosynthesis protein RibD [Leptospirillum sp. Group II '5-way CG'] Length = 388 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 60/157 (38%), Gaps = 29/157 (18%) Query: 1 MKKGNV-FMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55 M + FM+ AL+ A A R+++ P VGAV V +++ R + L HAE Sbjct: 1 MLRDEKVFMAMALDLAMMA--RDDVAPNPRVGAVVVRKGRVVGRGYHERPGL----PHAE 54 Query: 56 ILAIRMGC-RILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKG 107 +LA+R R LYV LEPC C I + I R+ S+P Sbjct: 55 VLALREAGERA------RGATLYVNLEPCCHLNKRTPPCTREILSSGIGRVVISLSDPNP 108 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + G+ ++ + + F Sbjct: 109 HVNGKGILELRDGGIP----VETGLLAPQAFAVNRGF 141 >gi|154316392|ref|XP_001557517.1| hypothetical protein BC1G_04127 [Botryotinia fuckeliana B05.10] gi|150845927|gb|EDN21120.1| hypothetical protein BC1G_04127 [Botryotinia fuckeliana B05.10] Length = 393 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 60/167 (35%), Gaps = 56/167 (33%) Query: 5 NVFMSCALEEAQ--NAALRNEIPVGAVAV--LNN--KIISRAGNRN------RELKDVTA 52 +M A E A+ N E +GAV V + +I++ AG+ +VTA Sbjct: 185 EKYMDLAAEVARSSNVVGIGEQ-IGAVVVERKSGAARILAVAGDARWMKWPWAGSGNVTA 243 Query: 53 HAEI-------------------------LAIRM------------------GCRILSQE 69 HA + A+ + Sbjct: 244 HAALRVIAMVADGIKVQEEHKAGKEPEANNALEQKLIFRDQPLDTLEAKHHNSAEWIDGY 303 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + E++LY+T EPC MC+ AI +R R+ +G PK GG+ ++ Sbjct: 304 LCHELELYITHEPCVMCSMAIVHSRFGRVIFGQRMPKTGGLCADSEL 350 >gi|237743385|ref|ZP_04573866.1| deoxycytidylate deaminase [Fusobacterium sp. 7_1] gi|229433164|gb|EEO43376.1| deoxycytidylate deaminase [Fusobacterium sp. 7_1] Length = 161 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 44/122 (36%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKD------- 49 + + FM A+ + + P VGA V +K I+ N + D Sbjct: 6 INWDSYFMGVAILSSMRSKD----PNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWE 61 Query: 50 ----------V-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ AI + S + L +YV L PC C AI + I+ + Sbjct: 62 RDGEFLNTKYPYVCHAELNAI-----LNSIKSLKNCTIYVALFPCHECTKAIIQSGIKEI 116 Query: 99 YY 100 Y Sbjct: 117 VY 118 >gi|229169074|ref|ZP_04296789.1| ComE operon protein 2 [Bacillus cereus AH621] gi|228614302|gb|EEK71412.1| ComE operon protein 2 [Bacillus cereus AH621] Length = 188 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + ++ Sbjct: 31 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + + +YY Sbjct: 90 -EEAEIYVTHFPCLQCCKAIIQSGVTAVYYA 119 >gi|149369588|ref|ZP_01889440.1| putative deoxycytidylate deaminase [unidentified eubacterium SCB49] gi|149357015|gb|EDM45570.1| putative deoxycytidylate deaminase [unidentified eubacterium SCB49] Length = 142 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 33/131 (25%), Positives = 49/131 (37%), Gaps = 23/131 (17%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-----RELKDV------ 50 K ++ A E ++ + + VGA+ V N IIS N E +D Sbjct: 8 KYDVAYLRMAKEWSKLSHCNRKQ-VGALIVKGNMIISDGYNGTPTGFDNECEDCDNNTHW 66 Query: 51 -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKG 107 HAE AI LY+TL PC C+ I + I+R+ Y G + Sbjct: 67 YVLHAEANAILKVASSTQS--CQGATLYITLSPCKDCSKLIHQSGIKRVVYHKGYKDD-- 122 Query: 108 GGIENGTQFYT 118 +G +F Sbjct: 123 ----SGLKFLE 129 >gi|61742821|ref|NP_001012750.1| deoxycytidylate deaminase isoform a [Homo sapiens] gi|66840174|gb|AAH88357.2| DCMP deaminase [Homo sapiens] gi|119625102|gb|EAX04697.1| dCMP deaminase, isoform CRA_a [Homo sapiens] gi|119625103|gb|EAX04698.1| dCMP deaminase, isoform CRA_a [Homo sapiens] Length = 189 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52 FM+ A AQ + N VGA V NKI+ N D TA Sbjct: 28 EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKL 86 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 87 DTKYPYVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 138 >gi|55623552|ref|XP_517546.1| PREDICTED: deoxycytidylate deaminase isoform 4 [Pan troglodytes] Length = 189 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52 FM+ A AQ + N VGA V NKI+ N D TA Sbjct: 28 EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKL 86 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 87 DTKYPYVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 138 >gi|126462807|ref|YP_001043921.1| riboflavin biosynthesis protein RibD [Rhodobacter sphaeroides ATCC 17029] gi|126104471|gb|ABN77149.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Rhodobacter sphaeroides ATCC 17029] Length = 356 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 45/148 (30%), Gaps = 21/148 (14%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL R VG V V +++ R R HAE + Sbjct: 1 MAHALRLGARGLGRTWPNPAVGCVIVKAGRVVGRGWTRPGGR----PHAEPV-----ALA 51 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + YVTLEPC CA A+ A + R+ +P G Sbjct: 52 QAGAAALGATAYVTLEPCSHHGRTPPCAEALIAAGLARVVTATGDPDPRVSGRGHAMLRE 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + + E +R F K Sbjct: 112 AG----IAVTERVLEAEARAAHAGFLKR 135 >gi|289168253|ref|YP_003446522.1| dCMP deaminase [Streptococcus mitis B6] gi|307705252|ref|ZP_07642119.1| comE operon protein 2 [Streptococcus mitis SK597] gi|307706964|ref|ZP_07643763.1| comE operon protein 2 [Streptococcus mitis SK321] gi|288907820|emb|CBJ22660.1| dCMP deaminase [Streptococcus mitis B6] gi|307617678|gb|EFN96846.1| comE operon protein 2 [Streptococcus mitis SK321] gi|307621201|gb|EFO00271.1| comE operon protein 2 [Streptococcus mitis SK597] Length = 155 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGN--------------RN 44 F + AL A + A VGA+ V +NK+IS N Sbjct: 9 DEYFAAQALLIANRSTCKRAK------VGAILVKDNKVISTGYNGSVSGTEHCIDHECLV 62 Query: 45 RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E V T HAE+ AI G + YVT PC C + +R+ Y Sbjct: 63 IEGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116 >gi|153009855|ref|YP_001371070.1| riboflavin biosynthesis protein RibD [Ochrobactrum anthropi ATCC 49188] gi|151561743|gb|ABS15241.1| riboflavin biosynthesis protein RibD [Ochrobactrum anthropi ATCC 49188] Length = 373 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 48/145 (33%), Gaps = 21/145 (14%) Query: 3 KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM + A+ VG + V + I+ R HAE A+ Sbjct: 14 DDVRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTAIGGRPHAEPQALA 69 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 + YVTLEPC CA A+ A + R+ A++P G Sbjct: 70 DAGEVA-----RGATAYVTLEPCAHHGRTPPCAEALVRAGVARVVVAATDPDERVSGRGF 124 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139 A E+ PGI +++ Sbjct: 125 AILREAG----IEVVPGILAEQAAD 145 >gi|257065945|ref|YP_003152201.1| CMP/dCMP deaminase zinc-binding [Anaerococcus prevotii DSM 20548] gi|256797825|gb|ACV28480.1| CMP/dCMP deaminase zinc-binding [Anaerococcus prevotii DSM 20548] Length = 148 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 44/121 (36%), Gaps = 24/121 (19%) Query: 1 MKKG-----NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNR--------- 45 M K FM A A+ VG V V N+I+S N + Sbjct: 1 MAKDRLSWEEYFMKLAKTVARRGTCDRAY-VGCVLVNEENRIVSTGYNGSIKGNPHCDEV 59 Query: 46 --ELKD----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 ++D T HAE+ AI + YVT PC C ++ A I+++Y Sbjct: 60 GHTMRDGHCIATIHAEMNAILYCAKEGIAT--KNTICYVTHFPCLNCTKSLIQAGIKKIY 117 Query: 100 Y 100 Y Sbjct: 118 Y 118 >gi|289705541|ref|ZP_06501933.1| riboflavin biosynthesis protein RibD [Micrococcus luteus SK58] gi|289557770|gb|EFD51069.1| riboflavin biosynthesis protein RibD [Micrococcus luteus SK58] Length = 377 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 52/146 (35%), Gaps = 22/146 (15%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 M A+ A VGAV ++++ +R R TAHAE+ A+ Sbjct: 12 MDLAVRAALRGVRGANPLVGAVLTDEAGRVLAVGHHRGR----GTAHAEVDALTRWRAAR 67 Query: 67 SQEILP------EVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 + + + L+VTLEPC C+ A+ A I L Y ++P G Sbjct: 68 AADPALAALDPAGLTLHVTLEPCDHTGSTGPCSQAVLDAGIGALRYAVADPTGHDGGGAA 127 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQI 140 + H + E + + Sbjct: 128 RLAA-----HGVRVTGPTGEAAALAL 148 >gi|227500311|ref|ZP_03930378.1| competence protein ComEB family protein [Anaerococcus tetradius ATCC 35098] gi|227217597|gb|EEI82909.1| competence protein ComEB family protein [Anaerococcus tetradius ATCC 35098] Length = 148 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 44/121 (36%), Gaps = 24/121 (19%) Query: 1 MKKG-----NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNR--------- 45 M K FM A A+ VG V V N+I+S N + Sbjct: 1 MAKDRLSWQEYFMKLAKTVARRGTCDRAY-VGCVLVNEENRIVSTGYNGSIKGNPHCDEV 59 Query: 46 --ELKD----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 ++D T HAE+ AI + YVT PC C ++ A I+++Y Sbjct: 60 GHTMRDGHCIATIHAEMNAILYCAKEGIAT--KNTICYVTHFPCLNCTKSLIQAGIKKIY 117 Query: 100 Y 100 Y Sbjct: 118 Y 118 >gi|110004586|emb|CAK98923.1| deoxycytidylate deaminase protein [Spiroplasma citri] Length = 166 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 33/131 (25%), Positives = 46/131 (35%), Gaps = 33/131 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN-RNRELKD------ 49 + + F+S A A + P VG+ V +II+ N R L D Sbjct: 13 LSWDDFFLSVAHVCAMRSKD----PHTQVGSCVVNQIGQIIATGYNGLPRGLNDDVFPWS 68 Query: 50 ----------V-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 AHAE+ AI + L +Y TL PC C I A I+ + Sbjct: 69 REGKYLETKYPYVAHAELNAILSA-----RTNLENCRIYTTLFPCAECTKIIIQAGIKEV 123 Query: 99 YYGASNPKGGG 109 Y + K G Sbjct: 124 IY--DDDKYEG 132 >gi|52141178|ref|YP_085651.1| ComE operon protein 2 [Bacillus cereus E33L] gi|51974647|gb|AAU16197.1| comE operon protein 2 [Bacillus cereus E33L] Length = 185 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + + Sbjct: 28 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 87 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 116 >gi|169775663|ref|XP_001822298.1| hypothetical protein AOR_1_92134 [Aspergillus oryzae RIB40] gi|83771033|dbj|BAE61165.1| unnamed protein product [Aspergillus oryzae] Length = 164 Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 26/59 (44%) Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110 HAE R +++ L E T EPC MCA I A I RL Y AS G+ Sbjct: 55 RHAEAELARNAADNYARDYLAETTFISTWEPCAMCAGTIYWANIGRLVYLASEKALQGV 113 >gi|321312043|ref|YP_004204330.1| DNA transport protein [Bacillus subtilis BSn5] gi|320018317|gb|ADV93303.1| putative enzyme associated to DNA transport (competence) [Bacillus subtilis BSn5] Length = 189 Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 25/125 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRE----------- 46 + FM+ + A + P VGA V + ++I+ N + Sbjct: 4 ISWNQYFMAQSHLLALRSTC----PRLSVGATIVRDKRMIAGGYNGSIAGGVHCADEGCL 59 Query: 47 ----LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 T HAE+ AI + ++YVT PC C +I A I+ +YY A Sbjct: 60 MIDDHCARTIHAEMNAILQCSKFGVPTD--GAEIYVTHYPCIQCCKSIIQAGIKTVYY-A 116 Query: 103 SNPKG 107 + K Sbjct: 117 EDYKT 121 >gi|224006712|ref|XP_002292316.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220971958|gb|EED90291.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 777 Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 59/175 (33%), Gaps = 43/175 (24%) Query: 2 KKGNVFMSCALEEAQN-AALRNEI-----PV-GAVAV-LNNKIISRAGNRNRELKDVTAH 53 K M A+ Q+ R PV GAV V + +I+ + + H Sbjct: 179 KHDKAMMRQAIMMVQSSGGERGSHGPFPRPVAGAVLVAKDGRILGKGRSTYA------GH 232 Query: 54 A------E--ILA--IRMGCRILSQE-----ILPEVDLYVTLEPC--------TMCAAAI 90 A E I A +R C + + E LYVTLEP + Sbjct: 233 AVEFAFKEAGINATPLREWCVAWPSDSKFRKDISESTLYVTLEPSNEGQGEEKPPITQLV 292 Query: 91 SLARIRRLYYGASNPKG-GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 +A I RL G +P E + + + GI + + +I+++ Sbjct: 293 EMAGIPRLVIGCQDPVPENAAEGAGRLHAA-----GVSVTMGILQGECQDLIKEY 342 >gi|156372900|ref|XP_001629273.1| predicted protein [Nematostella vectensis] gi|156216269|gb|EDO37210.1| predicted protein [Nematostella vectensis] Length = 208 Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 41/123 (33%), Gaps = 31/123 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-RNRELKD------ 49 + + FMS A AQ + P VGA V KI+ N D Sbjct: 47 ISWDDYFMSVAFLSAQRSKD----PSSQVGACIVNKERKIVGIGYNGMPNGCSDDELPWN 102 Query: 50 -----------V-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 HAE+ AI + + +YV L PC C+ I A ++ Sbjct: 103 RHADDELDTKYPYVCHAEMNAILN----KNSADVKGCTVYVALFPCNECSKIIIQAGLKE 158 Query: 98 LYY 100 + + Sbjct: 159 VVF 161 >gi|228929371|ref|ZP_04092394.1| ComE operon protein 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228830277|gb|EEM75891.1| ComE operon protein 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 188 Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + + Sbjct: 31 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 89 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 90 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119 >gi|313212148|emb|CBY16157.1| unnamed protein product [Oikopleura dioica] Length = 195 Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 47/132 (35%), Gaps = 32/132 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRN------------ 44 + FMS AL +Q + P VGA + +I+ N Sbjct: 9 LSWDEYFMSIALLSSQRSKD----PATQVGACIINKKQRIVGIGYNGLPHGCSDKELPWG 64 Query: 45 -----RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 E K HAE+ AI +Q + ++ TL PC CA I + I ++ Sbjct: 65 KTGDWMETKYPYVCHAEMNAILN----KNQADIDGGTIFTTLYPCNECAKLIIQSGISKV 120 Query: 99 YYGASNPKGGGI 110 Y N K G + Sbjct: 121 VYA--NKKPGSV 130 >gi|300858536|ref|YP_003783519.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Corynebacterium pseudotuberculosis FRC41] gi|300685990|gb|ADK28912.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Corynebacterium pseudotuberculosis FRC41] gi|302206248|gb|ADL10590.1| Riboflavin biosynthesis protein ribD [Corynebacterium pseudotuberculosis C231] gi|302330806|gb|ADL21000.1| Riboflavin biosynthesis protein ribD [Corynebacterium pseudotuberculosis 1002] gi|308276490|gb|ADO26389.1| Riboflavin biosynthesis protein ribD [Corynebacterium pseudotuberculosis I19] Length = 373 Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 38/111 (34%), Gaps = 27/111 (24%) Query: 17 NAALRNE---------IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 A + E PVGA V I+ + HAE++A++ Sbjct: 54 EAVAQGELAQGSTSPNPPVGAAIVSAQGDIVGVGYTQPVGG----PHAEVMALQSAGGAA 109 Query: 67 SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP--KGGG 109 + VTLEPC C A+ A I + Y +P K GG Sbjct: 110 -----RGATIVVTLEPCQHQGRTGPCTQALLDAGIAEVVYCLKDPGRKEGG 155 >gi|229013547|ref|ZP_04170680.1| ComE operon protein 2 [Bacillus mycoides DSM 2048] gi|229062025|ref|ZP_04199350.1| ComE operon protein 2 [Bacillus cereus AH603] gi|228717177|gb|EEL68852.1| ComE operon protein 2 [Bacillus cereus AH603] gi|228747707|gb|EEL97577.1| ComE operon protein 2 [Bacillus mycoides DSM 2048] Length = 188 Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + ++ Sbjct: 31 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + + +YY Sbjct: 90 -EEAEIYVTHFPCLQCCKAIIQSGVTAVYYA 119 >gi|167753214|ref|ZP_02425341.1| hypothetical protein ALIPUT_01485 [Alistipes putredinis DSM 17216] gi|167659145|gb|EDS03275.1| hypothetical protein ALIPUT_01485 [Alistipes putredinis DSM 17216] Length = 144 Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 14/87 (16%) Query: 26 VGAVAVLNNKIISRAGN------------RNRELKDVTAHAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N + K HAE AI + + Sbjct: 33 VGALIVKDKMIISDGYNGTPAGFENICEDETGKTKSYVLHAEANAITKVAKSANNCD--G 90 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 LY+T PC C+ I A IRR+ Y Sbjct: 91 STLYITAAPCIECSKLIIQAGIRRVVY 117 >gi|330903778|gb|EGH34350.1| cytosine deaminase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 40 Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 21/39 (53%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR 43 + FM A +EAQ IP+G+V V KII R NR Sbjct: 2 DAFMQAAFDEAQLGLKEGGIPIGSVIVHGGKIIGRGHNR 40 >gi|48477494|ref|YP_023200.1| deaminase [Picrophilus torridus DSM 9790] gi|48430142|gb|AAT43007.1| deaminase [Picrophilus torridus DSM 9790] Length = 172 Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 44/131 (33%), Gaps = 36/131 (27%) Query: 4 GNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGN------------------ 42 FM A A + + VGAV V +N++++ N Sbjct: 11 DEYFMRMAYLAASRSNCTRRK----VGAVIVKDNQVLATGYNGPPTHAVNCDLVGCIRDE 66 Query: 43 ------RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96 EL HAE AI ++ + +YVT PC +C+ + A I Sbjct: 67 LGIQSGERHELCRGL-HAEQNAIIQAA--VNGVSIKGAKIYVTTHPCVVCSKMLMNAYID 123 Query: 97 RLYY--GASNP 105 + Y G + Sbjct: 124 EIIYSEGYPDD 134 >gi|320165206|gb|EFW42105.1| deoxycytidylate deaminase [Capsaspora owczarzaki ATCC 30864] Length = 192 Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 43/119 (36%), Gaps = 31/119 (26%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-RNRELKD------VTA- 52 + FM+ A AQ + P VGA V NKI+ N D TA Sbjct: 39 DYFMAVAFLSAQRSKD----PSSQVGACIVNQENKIVGIGYNGMPNGCNDDLLPWARTAE 94 Query: 53 -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ A+ + + +YV L PC CA I + I+ + Y Sbjct: 95 SPLDTKYMYVCHAELNAVLN----KNASDVKGCTIYVALFPCNECAKIIIQSGIKEVIY 149 >gi|229175001|ref|ZP_04302520.1| ComE operon protein 2 [Bacillus cereus MM3] gi|228608462|gb|EEK65765.1| ComE operon protein 2 [Bacillus cereus MM3] Length = 188 Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + + Sbjct: 31 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 89 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 90 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119 >gi|209731626|gb|ACI66682.1| Deoxycytidylate deaminase [Salmo salar] gi|209735240|gb|ACI68489.1| Deoxycytidylate deaminase [Salmo salar] gi|303666664|gb|ADM16237.1| Deoxycytidylate deaminase [Salmo salar] Length = 195 Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 41/119 (34%), Gaps = 31/119 (26%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN------------------ 42 FM+ A AQ + P VGA V NKI+ N Sbjct: 34 EYFMAVAFLSAQRSKD----PSSQVGACIVNQENKIVGIGYNGMPNGCDDDLLPWARSAD 89 Query: 43 RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + K HAE+ AI + + +YV L PC CA I A I+ + Y Sbjct: 90 DRLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKDVIY 144 >gi|118479492|ref|YP_896643.1| comE operon protein 2 [Bacillus thuringiensis str. Al Hakam] gi|228916958|ref|ZP_04080519.1| ComE operon protein 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228935647|ref|ZP_04098461.1| ComE operon protein 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948040|ref|ZP_04110325.1| ComE operon protein 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228987579|ref|ZP_04147696.1| ComE operon protein 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229093396|ref|ZP_04224501.1| ComE operon protein 2 [Bacillus cereus Rock3-42] gi|229141064|ref|ZP_04269606.1| ComE operon protein 2 [Bacillus cereus BDRD-ST26] gi|229157941|ref|ZP_04286013.1| ComE operon protein 2 [Bacillus cereus ATCC 4342] gi|229186566|ref|ZP_04313727.1| ComE operon protein 2 [Bacillus cereus BGSC 6E1] gi|229198454|ref|ZP_04325158.1| ComE operon protein 2 [Bacillus cereus m1293] gi|118418717|gb|ABK87136.1| comE operon protein 2 [Bacillus thuringiensis str. Al Hakam] gi|228584957|gb|EEK43071.1| ComE operon protein 2 [Bacillus cereus m1293] gi|228596825|gb|EEK54484.1| ComE operon protein 2 [Bacillus cereus BGSC 6E1] gi|228625501|gb|EEK82256.1| ComE operon protein 2 [Bacillus cereus ATCC 4342] gi|228642342|gb|EEK98631.1| ComE operon protein 2 [Bacillus cereus BDRD-ST26] gi|228689990|gb|EEL43793.1| ComE operon protein 2 [Bacillus cereus Rock3-42] gi|228772153|gb|EEM20602.1| ComE operon protein 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228811626|gb|EEM57962.1| ComE operon protein 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228824007|gb|EEM69825.1| ComE operon protein 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228842679|gb|EEM87766.1| ComE operon protein 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 188 Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + + Sbjct: 31 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 89 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 90 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119 >gi|229031977|ref|ZP_04187962.1| ComE operon protein 2 [Bacillus cereus AH1271] gi|228729332|gb|EEL80324.1| ComE operon protein 2 [Bacillus cereus AH1271] Length = 188 Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + + Sbjct: 31 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 89 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 90 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119 >gi|212633820|ref|YP_002310345.1| cytidine/deoxycytidylate deaminase [Shewanella piezotolerans WP3] gi|212555304|gb|ACJ27758.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Shewanella piezotolerans WP3] Length = 146 Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV NN+I+S N T HAE AI R L Sbjct: 27 VGAVITENNRIVSLGFNGYPHGVSDSAETDNREMKLLKTLHAEENAILYAKR-----DLS 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I + + Sbjct: 82 GCEIWVTHFPCPNCAAKIIQTGLSTV 107 >gi|297182203|gb|ADI18374.1| pyrimidine deaminase [uncultured actinobacterium HF4000_04C13] Length = 338 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 45/130 (34%), Gaps = 19/130 (14%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VGAV V++ +++ + AHAE + + LY TLEPC Sbjct: 33 VGAVVVVDGRMVGSGATQPPGG----AHAERV-----ALAEAGPAAAGATLYTTLEPCDH 83 Query: 84 ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 C AI A + R+ G +P G A ++ G+ E Sbjct: 84 EGRTAPCTDAIIGAGVARVVVGIGDPDPEVSGRGIGRLREAGL----DVDVGVLEDEVSD 139 Query: 140 IIQDFFKERR 149 + + RR Sbjct: 140 TLAPYLHHRR 149 >gi|163942082|ref|YP_001646966.1| ComE operon protein 2 [Bacillus weihenstephanensis KBAB4] gi|163864279|gb|ABY45338.1| ComE operon protein 2 [Bacillus weihenstephanensis KBAB4] Length = 185 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + ++ Sbjct: 28 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + + +YY Sbjct: 87 -EEAEIYVTHFPCLQCCKAIIQSGVTAVYYA 116 >gi|327489897|gb|EGF21686.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis SK1058] Length = 155 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRELK---------- 48 F + AL A + A VGAV V +NK+IS N + Sbjct: 9 DQYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 62 Query: 49 -DV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D T HAE+ AI G + YVT PC C + +R+ Y Sbjct: 63 IDGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116 >gi|317128288|ref|YP_004094570.1| ComE operon protein 2 [Bacillus cellulosilyticus DSM 2522] gi|315473236|gb|ADU29839.1| ComE operon protein 2 [Bacillus cellulosilyticus DSM 2522] Length = 188 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR--------------NRE 46 + FM+ + A + + VGA V + +II+ N + Sbjct: 4 ISWHQYFMAQSHLLALRSTCSR-LMVGATIVRDKRIIAGGYNGAISGGVHCIDEGCYVID 62 Query: 47 LKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 V T HAE+ A+ + ++YVT PC C A+ A I+++YY Sbjct: 63 DHCVRTIHAEVNALLQCAKFGVAT--EGSEIYVTHFPCLNCCKALIQAGIKKVYYA 116 >gi|218905463|ref|YP_002453297.1| ComE operon protein 2 [Bacillus cereus AH820] gi|218539989|gb|ACK92387.1| ComE operon protein 2 [Bacillus cereus AH820] Length = 185 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + + Sbjct: 28 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 87 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 116 >gi|16079612|ref|NP_390436.1| hypothetical protein BSU25580 [Bacillus subtilis subsp. subtilis str. 168] gi|221310483|ref|ZP_03592330.1| required for DNA binding and uptake (competence) [Bacillus subtilis subsp. subtilis str. 168] gi|221314807|ref|ZP_03596612.1| required for DNA binding and uptake (competence) [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319729|ref|ZP_03601023.1| required for DNA binding and uptake (competence) [Bacillus subtilis subsp. subtilis str. JH642] gi|221324007|ref|ZP_03605301.1| required for DNA binding and uptake (competence) [Bacillus subtilis subsp. subtilis str. SMY] gi|418361|sp|P32393|COMEB_BACSU RecName: Full=ComE operon protein 2 gi|289261|gb|AAC36906.1| comE ORF2 [Bacillus subtilis] gi|1303797|dbj|BAA12453.1| ComEB [Bacillus subtilis] gi|2635004|emb|CAB14500.1| putative enzyme associated to DNA transport (competence) [Bacillus subtilis subsp. subtilis str. 168] gi|291485008|dbj|BAI86083.1| operon protein ComEB [Bacillus subtilis subsp. natto BEST195] Length = 189 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 25/125 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRE----------- 46 + FM+ + A + P VGA V + ++I+ N + Sbjct: 4 ISWNQYFMAQSHLLALRSTC----PRLSVGATIVRDKRMIAGGYNGSIAGGVHCADEGCL 59 Query: 47 ----LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 T HAE+ AI + ++YVT PC C +I A I+ +YY A Sbjct: 60 MIDDHCARTIHAEMNAILQCSKFGVPTD--GAEIYVTHYPCIQCCKSIIQAGIKTVYY-A 116 Query: 103 SNPKG 107 + K Sbjct: 117 EDYKT 121 >gi|330837260|ref|YP_004411901.1| dCMP deaminase [Spirochaeta coccoides DSM 17374] gi|329749163|gb|AEC02519.1| dCMP deaminase [Spirochaeta coccoides DSM 17374] Length = 161 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 41/122 (33%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------R 43 + FM AL A + P VGA V K I+ N Sbjct: 8 ISWDEYFMGVALLSAMRSKD----PSTQVGACIVSPEKRIVGVGYNGFPSGCNDDDLPWE 63 Query: 44 NR----ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 E K HAE+ AI + S L LYV L PC CA AI A I + Sbjct: 64 REGAFLETKYPFVCHAELNAI-----LNSSGNLKGSSLYVALFPCNECAKAIIQAGIVEI 118 Query: 99 YY 100 Y Sbjct: 119 VY 120 >gi|229123865|ref|ZP_04253058.1| ComE operon protein 2 [Bacillus cereus 95/8201] gi|228659579|gb|EEL15226.1| ComE operon protein 2 [Bacillus cereus 95/8201] Length = 188 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + + Sbjct: 31 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 89 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 90 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119 >gi|310831344|ref|YP_003969987.1| putative deoxycytidylate deaminase [Cafeteria roenbergensis virus BV-PW1] gi|309386528|gb|ADO67388.1| putative deoxycytidylate deaminase [Cafeteria roenbergensis virus BV-PW1] Length = 144 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 13/90 (14%) Query: 26 VGAVAVLNNKIISRAGN-----------RNRELKDVTAHAEILAIRMGCRILSQEILPEV 74 VG V V N +II+ N + T HAE AI ++ Sbjct: 38 VGCVIVKNKRIIATGYNGFPPGVEHISILKEGKEINTIHAEQNAISQCAKMGIS--CENS 95 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASN 104 LYVT PC C+ I + I +YY +N Sbjct: 96 VLYVTHYPCINCSKIIVASGISTIYYLHNN 125 >gi|150388180|ref|YP_001318229.1| CMP/dCMP deaminase, zinc-binding [Alkaliphilus metalliredigens QYMF] gi|149948042|gb|ABR46570.1| CMP/dCMP deaminase, zinc-binding [Alkaliphilus metalliredigens QYMF] Length = 146 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 43/130 (33%), Gaps = 46/130 (35%) Query: 4 GNVFMSCALEEAQNAALRNEIP----------VGAVAVLNNKIISRAGN----------- 42 FM A E+ VGAV V + +++S N Sbjct: 6 DQYFMEMA-----------EVVKTRSTCMRRQVGAVVVKDKRVLSSGYNGAPSGIEHCEK 54 Query: 43 ---RNRELKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90 +L + HAE AI + LYVTL+PC +CA + Sbjct: 55 TGCLREQLGVPSGERHELCRGLHAEQNAIIQAA--YHGVEIQGTTLYVTLQPCVLCAKML 112 Query: 91 SLARIRRLYY 100 A ++RL + Sbjct: 113 INAGVKRLVF 122 >gi|124262738|ref|YP_001023208.1| deoxycytidylate deaminase-like protein [Methylibium petroleiphilum PM1] gi|124266394|ref|YP_001020398.1| deoxycytidylate deaminase-like protein [Methylibium petroleiphilum PM1] gi|124259169|gb|ABM94163.1| deoxycytidylate deaminase-like protein [Methylibium petroleiphilum PM1] gi|124261984|gb|ABM96973.1| deoxycytidylate deaminase-like protein [Methylibium petroleiphilum PM1] Length = 187 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 32/124 (25%) Query: 1 MKKGNVFMSCALEEA---QNAALRNEIPVGAVAV-LNNKIISRAGN---RNRELKDVTA- 52 + ++FM A+ A ++A RN GA +NKI+ N R + D + Sbjct: 7 IDWHSMFMGVAMLAAARSKDARKRN----GACIASADNKILGVGYNGLPRGCDDDDPSYW 62 Query: 53 ----------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96 HAE+ AI C +L L +Y T PC C +I I+ Sbjct: 63 ADVDDDPVQSRHSYIVHAEVNAILN-CVVLP---LTGSTIYTTQFPCPRCVQSIIQVGIK 118 Query: 97 RLYY 100 R+ + Sbjct: 119 RVVF 122 >gi|269928636|ref|YP_003320957.1| CMP/dCMP deaminase zinc-binding protein [Sphaerobacter thermophilus DSM 20745] gi|269787993|gb|ACZ40135.1| CMP/dCMP deaminase zinc-binding protein [Sphaerobacter thermophilus DSM 20745] Length = 191 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 42/125 (33%), Gaps = 28/125 (22%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVTA 52 M + +M A+ + A+ VGAV VL +++I+ N D A Sbjct: 12 MARDEYYMRLAMAVRERASCLGSR-VGAVLVLQDRVIATGYNGTPMGMKNCDEGGCDRCA 70 Query: 53 -----------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 HAE + R +Y T++PC C + A I Sbjct: 71 HPERYPAGQGYDACICVHAEQNLLLTAARFGIAVR--GAVVYTTMQPCFGCLKELLQAEI 128 Query: 96 RRLYY 100 +YY Sbjct: 129 EAVYY 133 >gi|30264397|ref|NP_846774.1| ComE operon protein 2 [Bacillus anthracis str. Ames] gi|42783453|ref|NP_980700.1| ComE operon protein 2 [Bacillus cereus ATCC 10987] gi|47569322|ref|ZP_00240006.1| comE operon protein 2 [Bacillus cereus G9241] gi|47778306|ref|YP_022694.1| ComE operon protein 2 [Bacillus anthracis str. 'Ames Ancestor'] gi|49187220|ref|YP_030472.1| ComE operon protein 2 [Bacillus anthracis str. Sterne] gi|49481368|ref|YP_038380.1| comE operon protein 2 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65321698|ref|ZP_00394657.1| COG2131: Deoxycytidylate deaminase [Bacillus anthracis str. A2012] gi|165872069|ref|ZP_02216709.1| ComE operon protein 2 [Bacillus anthracis str. A0488] gi|167634581|ref|ZP_02392901.1| ComE operon protein 2 [Bacillus anthracis str. A0442] gi|167638591|ref|ZP_02396867.1| ComE operon protein 2 [Bacillus anthracis str. A0193] gi|170687331|ref|ZP_02878548.1| ComE operon protein 2 [Bacillus anthracis str. A0465] gi|170707358|ref|ZP_02897812.1| ComE operon protein 2 [Bacillus anthracis str. A0389] gi|177653276|ref|ZP_02935528.1| ComE operon protein 2 [Bacillus anthracis str. A0174] gi|190566854|ref|ZP_03019770.1| ComE operon protein 2 [Bacillus anthracis Tsiankovskii-I] gi|196034327|ref|ZP_03101736.1| ComE operon protein 2 [Bacillus cereus W] gi|196039164|ref|ZP_03106470.1| ComE operon protein 2 [Bacillus cereus NVH0597-99] gi|196044885|ref|ZP_03112119.1| ComE operon protein 2 [Bacillus cereus 03BB108] gi|206975981|ref|ZP_03236891.1| ComE operon protein 2 [Bacillus cereus H3081.97] gi|217961816|ref|YP_002340386.1| ComE operon protein 2 [Bacillus cereus AH187] gi|222097771|ref|YP_002531828.1| come operon protein 2 [Bacillus cereus Q1] gi|227817103|ref|YP_002817112.1| ComE operon protein 2 [Bacillus anthracis str. CDC 684] gi|229603209|ref|YP_002868616.1| ComE operon protein 2 [Bacillus anthracis str. A0248] gi|254684083|ref|ZP_05147943.1| comE operon protein 2 [Bacillus anthracis str. CNEVA-9066] gi|254721917|ref|ZP_05183706.1| comE operon protein 2 [Bacillus anthracis str. A1055] gi|254736431|ref|ZP_05194137.1| comE operon protein 2 [Bacillus anthracis str. Western North America USA6153] gi|254741468|ref|ZP_05199155.1| comE operon protein 2 [Bacillus anthracis str. Kruger B] gi|254750907|ref|ZP_05202946.1| comE operon protein 2 [Bacillus anthracis str. Vollum] gi|254757765|ref|ZP_05209792.1| comE operon protein 2 [Bacillus anthracis str. Australia 94] gi|300118681|ref|ZP_07056409.1| ComE operon protein 2 [Bacillus cereus SJ1] gi|301055818|ref|YP_003794029.1| ComE operon protein 2 [Bacillus anthracis CI] gi|30259055|gb|AAP28260.1| ComE operon protein 2 [Bacillus anthracis str. Ames] gi|42739382|gb|AAS43308.1| ComE operon protein 2 [Bacillus cereus ATCC 10987] gi|47552011|gb|AAT35428.1| ComE operon protein 2 [Bacillus anthracis str. 'Ames Ancestor'] gi|47553993|gb|EAL12360.1| comE operon protein 2 [Bacillus cereus G9241] gi|49181147|gb|AAT56523.1| ComE operon protein 2 [Bacillus anthracis str. Sterne] gi|49332924|gb|AAT63570.1| comE operon protein 2 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164712200|gb|EDR17737.1| ComE operon protein 2 [Bacillus anthracis str. A0488] gi|167513439|gb|EDR88809.1| ComE operon protein 2 [Bacillus anthracis str. A0193] gi|167530033|gb|EDR92768.1| ComE operon protein 2 [Bacillus anthracis str. A0442] gi|170127602|gb|EDS96475.1| ComE operon protein 2 [Bacillus anthracis str. A0389] gi|170668526|gb|EDT19272.1| ComE operon protein 2 [Bacillus anthracis str. A0465] gi|172081558|gb|EDT66630.1| ComE operon protein 2 [Bacillus anthracis str. A0174] gi|190561845|gb|EDV15814.1| ComE operon protein 2 [Bacillus anthracis Tsiankovskii-I] gi|195992869|gb|EDX56828.1| ComE operon protein 2 [Bacillus cereus W] gi|196024373|gb|EDX63046.1| ComE operon protein 2 [Bacillus cereus 03BB108] gi|196029791|gb|EDX68392.1| ComE operon protein 2 [Bacillus cereus NVH0597-99] gi|206745733|gb|EDZ57130.1| ComE operon protein 2 [Bacillus cereus H3081.97] gi|217065815|gb|ACJ80065.1| ComE operon protein 2 [Bacillus cereus AH187] gi|221241829|gb|ACM14539.1| comE operon protein 2 [Bacillus cereus Q1] gi|227007781|gb|ACP17524.1| ComE operon protein 2 [Bacillus anthracis str. CDC 684] gi|229267617|gb|ACQ49254.1| ComE operon protein 2 [Bacillus anthracis str. A0248] gi|298723930|gb|EFI64644.1| ComE operon protein 2 [Bacillus cereus SJ1] gi|300377987|gb|ADK06891.1| comE operon protein 2 [Bacillus cereus biovar anthracis str. CI] gi|324328230|gb|ADY23490.1| ComE operon protein 2 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 185 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + + D T HAE+ A+ + + Sbjct: 28 VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E ++YVT PC C AI + I +YY Sbjct: 87 -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 116 >gi|303257995|ref|ZP_07344004.1| cytidine/deoxycytidylate deaminase family protein [Burkholderiales bacterium 1_1_47] gi|302859338|gb|EFL82420.1| cytidine/deoxycytidylate deaminase family protein [Burkholderiales bacterium 1_1_47] Length = 138 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 18/114 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-----------V 50 K ++M+ A AQ + + + VG V V N+ IIS N D V Sbjct: 5 KDNEMYMTIAQIAAQRSYAKR-LKVGCVIVKNHSIISFGWNGMPTGYDNCCEYEVDGKLV 63 Query: 51 TA----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI + +++T PC C+ I I +YY Sbjct: 64 TRPEVQHAELNAI--AKLAQNGYSSNGAKIFITHSPCIHCSLLIQKCGINEVYY 115 >gi|281210463|gb|EFA84629.1| CMP/dCMP deaminase [Polysphondylium pallidum PN500] Length = 253 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 34/109 (31%), Gaps = 16/109 (14%) Query: 9 SCALEEAQ----------NAALRNEIP---VGAVAVL-NNKIISRAGNRNRELKDVTAHA 54 A EA+ N+IP A V N I NR H Sbjct: 42 ELAFHEAKMMEIAQYAINETYHNNKIPNAIFTASIVHPNGTTICMDRNRGE--DSSIRHG 99 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 E I + LY T E C MC AAI A ++ YG S Sbjct: 100 ETQVILACSEKFKKNTWKGYYLYTTGESCPMCQAAIMWAGFDKVIYGTS 148 >gi|33603318|ref|NP_890878.1| riboflavin biosynthesis protein ribd [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bordetella bronchiseptica RB50] gi|33577442|emb|CAE34707.1| riboflavin biosynthesis protein ribd [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bordetella bronchiseptica RB50] Length = 374 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 50/145 (34%), Gaps = 18/145 (12%) Query: 8 MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M AL A++ P VG V V + +++ + HAE+ A+R Sbjct: 1 MRRALALARSVMYSTAPNPRVGCVIVRDGQVLGEGATQPPGG----PHAEVCALREAAAR 56 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + L +YVTLEPC C A++ A R+ +P G Sbjct: 57 GAS--LAGATVYVTLEPCSHFGRTPPCVDALAAAAPARVVVAMGDPNPRVNGQGLARLRA 114 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144 A + + + ++ F Sbjct: 115 AG----IAVTEDVCRDEALELNAGF 135 >gi|160944642|ref|ZP_02091869.1| hypothetical protein FAEPRAM212_02155 [Faecalibacterium prausnitzii M21/2] gi|158443826|gb|EDP20830.1| hypothetical protein FAEPRAM212_02155 [Faecalibacterium prausnitzii M21/2] gi|295104361|emb|CBL01905.1| Deoxycytidylate deaminase [Faecalibacterium prausnitzii SL3/3] Length = 159 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 39/119 (32%), Gaps = 24/119 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRN-----------RELK 48 + FM AL A + N VGA V NKI+S N Sbjct: 7 INWDEYFMGIALLTAMRSKDPNSQ-VGACIVSPENKILSLGYNGMPMGCSDDEMPWEREG 65 Query: 49 DVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI L +YVTL PC C AI + I + Y Sbjct: 66 APLQTKYMYVCHAELNAILNSAHN----NLKGARVYVTLFPCNECTKAIIQSGIAEVVY 120 >gi|254303368|ref|ZP_04970726.1| dCMP deaminase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323560|gb|EDK88810.1| dCMP deaminase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 161 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 45/122 (36%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKD------- 49 + + FM A+ + + P VGA V +K I+ N + D Sbjct: 6 INWDSYFMGIAILSSMRSKD----PNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWE 61 Query: 50 ----------V-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ AI + S + L + +YV L PC C AI + I+ + Sbjct: 62 RDGEFLNTKYPYVCHAELNAI-----LNSIKSLKDCIIYVALFPCHECTKAIIQSGIKEI 116 Query: 99 YY 100 Y Sbjct: 117 VY 118 >gi|58389825|ref|XP_317305.2| AGAP008158-PA [Anopheles gambiae str. PEST] gi|55237525|gb|EAA12688.2| AGAP008158-PA [Anopheles gambiae str. PEST] Length = 180 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 43/119 (36%), Gaps = 31/119 (26%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNR------------NRELK 48 FM+ A A+ + P VGA V +N+I+ N ++ Sbjct: 31 ECFMAMAFLAAKRSKD----PSTQVGACIVNEDNRIVGIGYNGFPKGCSDDEFPWSKTSD 86 Query: 49 DVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE+ AI + + +YV L PC CA I + IR + Y Sbjct: 87 NPLETKYLYVCHAEVNAILN----KNSTDVRNCTMYVALFPCNECAKIIIQSAIREVVY 141 >gi|241896673|ref|ZP_04783969.1| competence protein ComEB [Weissella paramesenteroides ATCC 33313] gi|241870154|gb|EER73905.1| competence protein ComEB [Weissella paramesenteroides ATCC 33313] Length = 157 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 18/110 (16%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKDVT 51 FM A+ A + VGAV V + +II+ N + + Sbjct: 11 YFMLQAIMLAARSTCTRLH-VGAVVVKDGRIIASGYNGSVSGTPHCTEVGDLVVDGHCIR 69 Query: 52 A-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 A HAE A+ ++ ++VT PC C + A I+++ Y Sbjct: 70 AVHAEQNALMQLAKMGISAD--GAQVFVTDFPCVHCTKLLLQAGIKKINY 117 >gi|227894427|ref|ZP_04012232.1| competence protein ComEB [Lactobacillus ultunensis DSM 16047] gi|227863797|gb|EEJ71218.1| competence protein ComEB [Lactobacillus ultunensis DSM 16047] Length = 159 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 18/111 (16%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV---------- 50 FM AL AQ + + VG+V V +++II N + + DV Sbjct: 9 QYFMIQALVIAQRSTCNRAL-VGSVLVKDHRIIGTGYNGSVSGQPHCDDVGHQMVDGHCV 67 Query: 51 -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H+E+ AI + ++YVT PC C ++ A ++++ Y Sbjct: 68 RTIHSEMNAIIQCAKFGVST--ENTEIYVTHFPCYNCCKSLLQAGVKKINY 116 >gi|115385499|ref|XP_001209296.1| hypothetical protein ATEG_09994 [Aspergillus terreus NIH2624] gi|114187743|gb|EAU29443.1| hypothetical protein ATEG_09994 [Aspergillus terreus NIH2624] Length = 163 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 33/97 (34%), Gaps = 10/97 (10%) Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP---KGG 108 HAE R + E L L T EPC MCA I A I RL Y AS K Sbjct: 55 RHAECELARNAADNFAPEYLARSTLVSTWEPCAMCAGTIYWANIGRLVYLASEKELQKVV 114 Query: 109 GIENGTQFYTLATCH-------HSPEIYPGISEQRSR 138 G N C E+ ++ ++ Sbjct: 115 GDGNPENLTLDLPCRTVFDRGQRKVEVIGPVAGWEAK 151 >gi|332367208|gb|EGJ44944.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis SK1059] Length = 155 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRELK---------- 48 F + AL A + A VGAV V +NK+IS N + Sbjct: 9 DQYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 62 Query: 49 -DV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D T HAE+ AI G + YVT PC C + +R+ Y Sbjct: 63 IDGHCVRTLHAEVNAILQGADRGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116 >gi|125718308|ref|YP_001035441.1| dCMP deaminase [Streptococcus sanguinis SK36] gi|323351275|ref|ZP_08086931.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis VMC66] gi|125498225|gb|ABN44891.1| DCMP deaminase, putative [Streptococcus sanguinis SK36] gi|322122499|gb|EFX94210.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis VMC66] gi|324991558|gb|EGC23491.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis SK353] gi|324993919|gb|EGC25838.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis SK405] gi|324994762|gb|EGC26675.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis SK678] gi|325687201|gb|EGD29223.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis SK72] gi|325694913|gb|EGD36818.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis SK150] gi|325696064|gb|EGD37955.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis SK160] gi|327463181|gb|EGF09502.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis SK1] gi|327474790|gb|EGF20195.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis SK408] gi|328946547|gb|EGG40686.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis SK1087] gi|332359448|gb|EGJ37268.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis SK355] gi|332361943|gb|EGJ39745.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis SK49] gi|332362515|gb|EGJ40315.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis SK1056] Length = 155 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRELK---------- 48 F + AL A + A VGAV V +NK+IS N + Sbjct: 9 DQYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 62 Query: 49 -DV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D T HAE+ AI G + YVT PC C + +R+ Y Sbjct: 63 IDGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116 >gi|327470713|gb|EGF16169.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis SK330] Length = 155 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRELK---------- 48 F + AL A + A VGAV V +NK+IS N + Sbjct: 9 DQYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 62 Query: 49 -DV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D T HAE+ AI G + YVT PC C + +R+ Y Sbjct: 63 IDGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116 >gi|190349179|gb|EDK41782.2| hypothetical protein PGUG_05880 [Meyerozyma guilliermondii ATCC 6260] Length = 365 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 34/65 (52%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 +Y + EPC MC A+ +RI ++ Y P GG+E+ Q + + +I+ I E+ Sbjct: 287 VYTSHEPCIMCCMALVHSRISKITYIKPVPSTGGLESHYQLGDRPSLNWRFKIWKWIGEE 346 Query: 136 RSRQI 140 +++ Sbjct: 347 EMQKL 351 >gi|146412291|ref|XP_001482117.1| hypothetical protein PGUG_05880 [Meyerozyma guilliermondii ATCC 6260] Length = 365 Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 34/65 (52%) Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 +Y + EPC MC A+ +RI ++ Y P GG+E+ Q + + +I+ I E+ Sbjct: 287 VYTSHEPCIMCCMALVHSRISKITYIKPVPSTGGLESHYQLGDRPSLNWRFKIWKWIGEE 346 Query: 136 RSRQI 140 +++ Sbjct: 347 EMQKL 351 >gi|317471969|ref|ZP_07931301.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Anaerostipes sp. 3_2_56FAA] gi|316900373|gb|EFV22355.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Anaerostipes sp. 3_2_56FAA] Length = 170 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 46/119 (38%), Gaps = 24/119 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGN--------------RNR 45 + FM AL AQ + + VGA V + NKI+S N R Sbjct: 18 LSWDQYFMGVALLSAQRSKD-DHTQVGACLVNDQNKILSVGYNGMPTGCHDDDMPWEREG 76 Query: 46 ELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E D HAE+ AI L +YVTL PC CA AI + ++ + Y Sbjct: 77 EPLDTKYFYVCHAELNAILN----YGGGSLYGARVYVTLFPCNECAKAIIQSGMKEVIY 131 >gi|167753725|ref|ZP_02425852.1| hypothetical protein ALIPUT_02006 [Alistipes putredinis DSM 17216] gi|167658350|gb|EDS02480.1| hypothetical protein ALIPUT_02006 [Alistipes putredinis DSM 17216] Length = 360 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 47/139 (33%), Gaps = 27/139 (19%) Query: 3 KGNVFMSCALEEAQNAALRNEIP------VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 + ++ A++E++ P VGAV + ++ I T HAE Sbjct: 216 EDRRYLQMAIDESRKC-----TPSTSSYCVGAVILTTDRKIFTGY---THETSPTHHAEQ 267 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCT-------MCAAAISLARIRRLYYGASNPKGGG 109 AI + L +Y ++EPC+ C+ I RR+ + P Sbjct: 268 EAILKALAAGVE--LRGATIYSSMEPCSERKSEPESCSELIIRHEFRRVVFALYEPDCFV 325 Query: 110 IENGTQFYTLATCHHSPEI 128 G L H E+ Sbjct: 326 CCQGA--LNLRR--HRIEV 340 >gi|170728271|ref|YP_001762297.1| zinc-binding CMP/dCMP deaminase [Shewanella woodyi ATCC 51908] gi|169813618|gb|ACA88202.1| CMP/dCMP deaminase zinc-binding [Shewanella woodyi ATCC 51908] Length = 145 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV +N+I+S N T HAE AI R L Sbjct: 27 VGAVITEDNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILYAKR-----DLS 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I + + Sbjct: 82 GCEIWVTHFPCPNCAAKIIQTGLTTV 107 >gi|325286502|ref|YP_004262292.1| CMP/dCMP deaminase zinc-binding protein [Cellulophaga lytica DSM 7489] gi|324321956|gb|ADY29421.1| CMP/dCMP deaminase zinc-binding protein [Cellulophaga lytica DSM 7489] Length = 146 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 40/116 (34%), Gaps = 25/116 (21%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA--------- 52 K ++ A E + + + + VGA+ V + IIS N T Sbjct: 14 KYDEAYLRMAQEWGKLSYCKRKQ-VGAIIVKDRMIISDGYNGT-----PTGFENICEDEE 67 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI LY+TL PC C+ I + I R+ Y Sbjct: 68 GYTKWYVLHAEANAISKVASSTQS--CTGATLYITLSPCKECSKLIHQSGIVRVVY 121 >gi|218680684|ref|ZP_03528581.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidinedea [Rhizobium etli CIAT 894] Length = 307 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 41/117 (35%), Gaps = 19/117 (16%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VG + V ++ ++ +A HAE A+ + E YVTLEPC Sbjct: 1 VGCLIVKDSVVVGQAVTAVGGR----PHAEPQAL-----AEAGEAARGATAYVTLEPCSH 51 Query: 84 ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136 CA A+ + R+ ++P G A E+ G+ E Sbjct: 52 HGKTPPCAEALIAYGVARVVISVTDPDPRVSGRGIAMLREAG----IEVDAGVLEAE 104 >gi|269968353|ref|ZP_06182372.1| deoxycytidylate deaminase, putative [Vibrio alginolyticus 40B] gi|269827039|gb|EEZ81354.1| deoxycytidylate deaminase, putative [Vibrio alginolyticus 40B] Length = 156 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 43/114 (37%), Gaps = 21/114 (18%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGN-------------RN 44 M + + + A+ A ++ P VGAV N+I+S N Sbjct: 1 MTMISKWAKRFYQMAELVASWSKDPSTQVGAVITKQNRIVSVGFNGYPHGVSDSVDTDER 60 Query: 45 RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 T HAE AI + S+ L D++VT PC CAA I I + Sbjct: 61 ELKYLKTLHAEENAI-----LFSKRDLDGCDIWVTHFPCPNCAAKIIQTGISHV 109 >gi|325970393|ref|YP_004246584.1| dCMP deaminase [Spirochaeta sp. Buddy] gi|324025631|gb|ADY12390.1| dCMP deaminase [Spirochaeta sp. Buddy] Length = 161 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 42/122 (34%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-------------- 42 + FM A+ + + P VGA + ++KI+ N Sbjct: 8 ISWDEYFMGVAVLSSMRSKD----PSTQVGACIINADHKIVGVGYNGFPIGVNDDEVPWE 63 Query: 43 RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 R D HAE+ AI L LYV L PC CA AI + IR + Sbjct: 64 REGAWLDTKYPYVCHAELNAILNA----ISSSLKGCSLYVGLFPCNECAKAIIQSGIREV 119 Query: 99 YY 100 Y Sbjct: 120 VY 121 >gi|210614123|ref|ZP_03290059.1| hypothetical protein CLONEX_02272 [Clostridium nexile DSM 1787] gi|210150824|gb|EEA81832.1| hypothetical protein CLONEX_02272 [Clostridium nexile DSM 1787] Length = 162 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 45/126 (35%), Gaps = 31/126 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR------------N 44 + FM A+ + P VG V +NKI+S N Sbjct: 9 ISWDEYFMGVAMLSGMRSKD----PSTQVGCCIVSQDNKILSMGYNGFPIGCSDDEFPWE 64 Query: 45 RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 RE D + H+E+ AI S L LYV+L PC CA AI + IR Sbjct: 65 REGDDPLETKYLYSTHSELNAILN----YSGGSLAGAKLYVSLFPCNECAKAIIQSGIRE 120 Query: 98 LYYGAS 103 + Y Sbjct: 121 VIYDCD 126 >gi|167748501|ref|ZP_02420628.1| hypothetical protein ANACAC_03245 [Anaerostipes caccae DSM 14662] gi|167652493|gb|EDR96622.1| hypothetical protein ANACAC_03245 [Anaerostipes caccae DSM 14662] Length = 170 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 46/119 (38%), Gaps = 24/119 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGN--------------RNR 45 + FM AL AQ + + VGA V + NKI+S N R Sbjct: 18 LSWDQYFMGVALLSAQRSKD-DHTQVGACLVNDQNKILSVGYNGMPTGCHDDDMPWEREG 76 Query: 46 ELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E D HAE+ AI L +YVTL PC CA AI + ++ + Y Sbjct: 77 EPLDTKYFYVCHAELNAILN----YGGGSLYGARVYVTLFPCNECAKAIIQSGMKEVIY 131 >gi|153837138|ref|ZP_01989805.1| deoxycytidylate deaminase [Vibrio parahaemolyticus AQ3810] gi|149749555|gb|EDM60301.1| deoxycytidylate deaminase [Vibrio parahaemolyticus AQ3810] Length = 154 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N T HAE AI + S+ L Sbjct: 27 VGAVITKQNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 D++VT PC CAA I I + Sbjct: 82 GCDIWVTHFPCPNCAAKIIQTGISHV 107 >gi|124514350|gb|EAY55863.1| riboflavin biosynthesis protein RibD [Leptospirillum rubarum] Length = 388 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 60/157 (38%), Gaps = 29/157 (18%) Query: 1 MKKGNV-FMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55 M + FM+ AL+ A A R+++ P VGAV V +++ R + L HAE Sbjct: 1 MLRDEKVFMAMALDLAMMA--RDDVAPNPRVGAVVVRKGRVVGRGYHERPGL----PHAE 54 Query: 56 ILAIRMGC-RILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKG 107 +LA+R R LYV LEPC C I + I R+ S+P Sbjct: 55 VLALREAGERA------RGATLYVNLEPCCHLNKRTPPCTREILSSGIGRVVISLSDPNP 108 Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 G + G+ ++ + + F Sbjct: 109 HVNGKGILELREGG----VSVETGLLAPQAFAVNRGF 141 >gi|91223974|ref|ZP_01259237.1| putative deoxycytidylate deaminase [Vibrio alginolyticus 12G01] gi|254227760|ref|ZP_04921191.1| Deoxycytidylate deaminase [Vibrio sp. Ex25] gi|262395803|ref|YP_003287656.1| deoxycytidylate deaminase [Vibrio sp. Ex25] gi|91190885|gb|EAS77151.1| putative deoxycytidylate deaminase [Vibrio alginolyticus 12G01] gi|151939802|gb|EDN58629.1| Deoxycytidylate deaminase [Vibrio sp. Ex25] gi|262339397|gb|ACY53191.1| deoxycytidylate deaminase [Vibrio sp. Ex25] Length = 154 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N T HAE AI + S+ L Sbjct: 27 VGAVITKQNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 D++VT PC CAA I I + Sbjct: 82 GCDIWVTHFPCPNCAAKIIQTGISHV 107 >gi|157150018|ref|YP_001450270.1| ComE operon family protein [Streptococcus gordonii str. Challis substr. CH1] gi|157074812|gb|ABV09495.1| comE operon protein 2 family [Streptococcus gordonii str. Challis substr. CH1] Length = 155 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 19/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-------------- 49 F + AL A + + VGAV V +NK+IS N + + Sbjct: 9 DEYFAAQALLIANRSTCKRAR-VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLIIDGHC 67 Query: 50 -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI G + YVT PC C + +R+ Y Sbjct: 68 VRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116 >gi|2258167|gb|AAB64529.1| Ylr316cp [Saccharomyces cerevisiae] gi|207342844|gb|EDZ70483.1| YLR316Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|323303779|gb|EGA57563.1| Tad3p [Saccharomyces cerevisiae FostersB] gi|323307960|gb|EGA61217.1| Tad3p [Saccharomyces cerevisiae FostersO] gi|323336362|gb|EGA77630.1| Tad3p [Saccharomyces cerevisiae Vin13] gi|323353850|gb|EGA85705.1| Tad3p [Saccharomyces cerevisiae VL3] Length = 163 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 19/125 (15%) Query: 28 AVAV----LNNKIISR-AGNRNRELKDVTAHAEILAIRMGCRIL--------SQEILPEV 74 +V V +K+++ N L H+ ++ IR L + + + Sbjct: 29 SVFVDPSRKKDKVVAEDGRNCENSL--PIDHSVMVGIRAVGERLREGVDEDANSYLCLDY 86 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLATCHHSPEIYP 130 D+Y+T EPC+MC+ A+ +R+RR+ + + G + +G + + E + Sbjct: 87 DVYLTHEPCSMCSMALIHSRVRRVVFLTEMQRTGSLKLTSGDGYCMNDNKQLNSTYEAFQ 146 Query: 131 GISEQ 135 I E+ Sbjct: 147 WIGEE 151 >gi|9759207|dbj|BAB09649.1| unnamed protein product [Arabidopsis thaliana] Length = 438 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 6/77 (7%) Query: 72 PEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125 D+++ LEPC CA A+ RI+R++Y N GG+ + + + +H Sbjct: 360 TGYDIFLLLEPCTIRDMFPRCAMALVHQRIKRIFYAFPNTTAGGLGSVHRLQGEKSLNHH 419 Query: 126 PEIYPGISEQRSRQIIQ 142 ++ + + + + Sbjct: 420 YAVFRVLLPDDALRQMT 436 >gi|332291606|ref|YP_004430215.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus 4H-3-7-5] gi|332169692|gb|AEE18947.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus 4H-3-7-5] Length = 142 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 15/111 (13%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT-- 51 K ++ A E + + + VGA+ V + IIS N + ++ T Sbjct: 7 KYDIAYLRMAREWGKLSYCNRKQ-VGAIIVKDKMIISDGYNGTPTGFENVCEDDENNTKW 65 Query: 52 --AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI LY+TL PC C+ + A I+R+ Y Sbjct: 66 YVLHAEANAILKVASSTQSCH--GATLYITLSPCKDCSKLVHQAGIKRVVY 114 >gi|312374791|gb|EFR22274.1| hypothetical protein AND_15517 [Anopheles darlingi] Length = 193 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 42/119 (35%), Gaps = 31/119 (26%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNR------------NRELK 48 FM+ A A+ + P VGA V +K ++ N ++ Sbjct: 26 EYFMAMAFLAAKRSKD----PSTQVGACIVNEDKRVVGLGYNGFPTGCNDDEFPWSKTSS 81 Query: 49 DVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D HAE+ AI + + +YV L PC CA I + IR + Y Sbjct: 82 DPLETKYLYVCHAEVNAILN----KNSADVKNCTMYVALFPCNECAKIIIQSAIREVVY 136 >gi|300775315|ref|ZP_07085177.1| competence protein ComEB [Chryseobacterium gleum ATCC 35910] gi|300506055|gb|EFK37191.1| competence protein ComEB [Chryseobacterium gleum ATCC 35910] Length = 140 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 53/144 (36%), Gaps = 28/144 (19%) Query: 1 MKK-GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT 51 M K ++ A E A+ + + + VGA+ V + IIS N + + T Sbjct: 1 MNKFDKAYLKMAQEWAKLSYCKRKQ-VGALIVKDRMIISDGYNGTPSGFENCCEDEEGKT 59 Query: 52 A----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNP 105 HAE AI LY+TL PC C+ I A I RL Y S+ Sbjct: 60 HWYVLHAEANAILKLAASTQSA--KGATLYLTLSPCKECSKLILQAGITRLVYINEYSDD 117 Query: 106 KGGGIENGTQFYTLATCHHSPEIY 129 G F +H+ EI Sbjct: 118 D------GISFLR----NHNIEIE 131 >gi|323332396|gb|EGA73805.1| Tad3p [Saccharomyces cerevisiae AWRI796] Length = 163 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 19/125 (15%) Query: 28 AVAV----LNNKIISR-AGNRNRELKDVTAHAEILAIRMGCRIL--------SQEILPEV 74 +V V +K+++ N L H+ ++ IR L + + + Sbjct: 29 SVFVDPSRKKDKVVAEDGRNCENSL--PIDHSVMVGIRAVGERLREGVDEDANSYLCLDY 86 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLATCHHSPEIYP 130 D+Y+T EPC+MC+ A+ +R+RR+ + + G + +G + + E + Sbjct: 87 DVYLTHEPCSMCSMALIHSRVRRVVFLTEMQRTGSLKLTSGDGYCMNDNKQLNSTYEAFQ 146 Query: 131 GISEQ 135 I E+ Sbjct: 147 WIGEE 151 >gi|240143386|ref|ZP_04741987.1| putative deoxycytidylate deaminase [Roseburia intestinalis L1-82] gi|257204654|gb|EEV02939.1| putative deoxycytidylate deaminase [Roseburia intestinalis L1-82] gi|291537131|emb|CBL10243.1| Deoxycytidylate deaminase [Roseburia intestinalis M50/1] gi|291540369|emb|CBL13480.1| Deoxycytidylate deaminase [Roseburia intestinalis XB6B4] Length = 161 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 43/122 (35%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNN-KIISRAGNRN-----------R 45 + FM A+ + P VGA V + KI+S N Sbjct: 9 ISWDEYFMGVAVLSGMRSKD----PNTQVGACIVSEDHKILSMGYNGFPTGCSDDEFPWE 64 Query: 46 ELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + T H+E+ AI L +YVTL PC CA AI + IRR+ Sbjct: 65 REGEPLENKYFYTTHSELNAILN----YRGGSLEGATIYVTLFPCNECAKAIIQSGIRRI 120 Query: 99 YY 100 Y Sbjct: 121 VY 122 >gi|189424806|ref|YP_001951983.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ] gi|189421065|gb|ACD95463.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ] Length = 156 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 34/99 (34%), Gaps = 25/99 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGA+ V + I++ N LK + HAE AI Sbjct: 28 VGALLVKDRNILATGYNGTPSGIRHCEETGCLRERLKVPSGERHELCRGLHAEQNAIIQA 87 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 R + LY T PC +C + A I+R+ Y Sbjct: 88 ARHGVN--IDGSTLYCTTMPCIICTKMLINAGIKRIVYA 124 >gi|169836056|ref|ZP_02869244.1| riboflavin biosynthesis protein RibD [candidate division TM7 single-cell isolate TM7a] Length = 66 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 12/68 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VGAV V + K+I ++ HAE+ A+ + + + L +YVTLEPC Sbjct: 2 VGAVVVQDGKVIGTGYHKYFGG----PHAEVYALEEAAQ--NSKDLSNATIYVTLEPCSH 55 Query: 84 ----TMCA 87 CA Sbjct: 56 YGKTPPCA 63 >gi|149182757|ref|ZP_01861221.1| ComEB [Bacillus sp. SG-1] gi|148849523|gb|EDL63709.1| ComEB [Bacillus sp. SG-1] Length = 175 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----------D----VTAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE+ AI + Sbjct: 18 VGATIVRDKRIIAGGYNGSIAGGVHCIDEGCYVIDNHCVRTIHAEMNAIIQCAKFGVPT- 76 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 ++YVT PC C + A I+++YY Sbjct: 77 -AGAEIYVTHFPCLQCCKGLIQAGIKKVYYA 106 >gi|156841735|ref|XP_001644239.1| hypothetical protein Kpol_1051p30 [Vanderwaltozyma polyspora DSM 70294] gi|156114877|gb|EDO16381.1| hypothetical protein Kpol_1051p30 [Vanderwaltozyma polyspora DSM 70294] Length = 317 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 44/152 (28%), Gaps = 39/152 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---------------RNRE 46 FM A A + R VG V V + ++I+ N R + Sbjct: 169 DTYFMKLATLAASRSNCMKRR---VGCVIVRDRRVIATGYNGTPRHLTNCFNGGCPRCND 225 Query: 47 LKDVT------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE A+ R I LY PC C+ I I+ + Y Sbjct: 226 GNSHTLHTCLCLHAEENALLEAGR---DRIGQNAILYCDTCPCLTCSVKIVQTGIKEVVY 282 Query: 101 GAS---NP------KGGGIE-NGTQFYTLATC 122 S + K GG+ F Sbjct: 283 SQSYRMDEDSFKVLKEGGVNIRQFNFLQDPRI 314 >gi|34419354|ref|NP_899367.1| dCMP deaminase [Vibrio phage KVP40] gi|34333035|gb|AAQ64190.1| dCMP deaminase [Vibrio phage KVP40] Length = 150 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 36/95 (37%), Gaps = 21/95 (22%) Query: 26 VGAVAVLNNKIISRAGN----------RNRELKDVTA---------HAEILAIRMGCRIL 66 VGAV V N++IIS N + D+T HAE AI R Sbjct: 31 VGAVIVKNDRIISHGYNGTPSGMLHCKDTADFGDLTHRQWSEIHEIHAEQNAICYAARAG 90 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 +YVT PC CA I A I+ L G Sbjct: 91 IST--EGATMYVTASPCHNCAKLIVAAGIKILIVG 123 >gi|225028456|ref|ZP_03717648.1| hypothetical protein EUBHAL_02730 [Eubacterium hallii DSM 3353] gi|224954206|gb|EEG35415.1| hypothetical protein EUBHAL_02730 [Eubacterium hallii DSM 3353] Length = 159 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 41/116 (35%), Gaps = 24/116 (20%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNR----NRELKDV-------- 50 FM AL AQ + N VG+ V NKI+S N + + Sbjct: 10 DAYFMGVALLSAQRSKD-NNTQVGSCIVNPHNKILSMGYNGMPTGCNDDRMPWERKGTPL 68 Query: 51 ------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI S L +Y TL PC C AI A I + Y Sbjct: 69 DTKYLYVCHAELNAILN----YSGGSLRGARIYTTLFPCNECTKAIIQAGITEVIY 120 >gi|260777313|ref|ZP_05886207.1| putative deoxycytidylate deaminase [Vibrio coralliilyticus ATCC BAA-450] gi|260606979|gb|EEX33253.1| putative deoxycytidylate deaminase [Vibrio coralliilyticus ATCC BAA-450] Length = 150 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 31/86 (36%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N T HAE AI R L Sbjct: 27 VGAVITKQNRIVSVGFNGYPHGISDSAMTDEREMKYLKTLHAEENAILFAKR-----DLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I I + Sbjct: 82 GCEIWVTHFPCPNCAAKIIQTGISAV 107 >gi|227873068|ref|ZP_03991362.1| dCMP deaminase [Oribacterium sinus F0268] gi|227841049|gb|EEJ51385.1| dCMP deaminase [Oribacterium sinus F0268] Length = 173 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 43/125 (34%), Gaps = 33/125 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNN-KIISRAGN-------------- 42 + FM A + P VGA V + KI+S N Sbjct: 18 ISWDEYFMGICTLSAHRSKD----PSTQVGACIVSPDHKILSMGYNGFPKGCSDDIFPWA 73 Query: 43 RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 + + +D HAE+ AI L +YVTL PC CA AI + I Sbjct: 74 KMKAEQDPYNAKYFYVTHAELNAILN----YRGGSLEGATIYVTLFPCNECAKAIIQSGI 129 Query: 96 RRLYY 100 + L Y Sbjct: 130 KTLVY 134 >gi|327461076|gb|EGF07409.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis SK1057] Length = 155 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%) Query: 4 GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRELK---------- 48 F + AL A + A VGAV V +NK+IS N + Sbjct: 9 DQYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 62 Query: 49 -DV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D T HAE+ AI G + YVT PC C + +R+ Y Sbjct: 63 IDGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116 >gi|146296225|ref|YP_001179996.1| CMP/dCMP deaminase, zinc-binding [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409801|gb|ABP66805.1| CMP/dCMP deaminase, zinc-binding protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 151 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGA+ V + +I++ N +L + HAE AI Sbjct: 27 VGALIVKDKRILATGYNGAPSNLPHCEEVGCLREKLNVPSGQRHELCRGLHAEQNAIIQA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++ + +Y T PC +CA I A I+++ Y Sbjct: 87 AKMGVN--IDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122 >gi|225378688|ref|ZP_03755909.1| hypothetical protein ROSEINA2194_04358 [Roseburia inulinivorans DSM 16841] gi|225209525|gb|EEG91879.1| hypothetical protein ROSEINA2194_04358 [Roseburia inulinivorans DSM 16841] Length = 161 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 43/122 (35%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRNRELKD------- 49 + FM A+ + P VGA V ++KI+S N Sbjct: 9 ISWDEYFMGVAMLTGMRSKD----PNTQVGACIVSADHKILSMGYNGLPTGCSDDEFPWG 64 Query: 50 -----------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 T H+E+ AI L +YV+L PC CA AI A I+R+ Sbjct: 65 REGAPLENKYLFTTHSELNAILN----YRGGSLEGSTIYVSLFPCNECAKAIIQAGIKRI 120 Query: 99 YY 100 Y Sbjct: 121 VY 122 >gi|326536349|ref|YP_004300790.1| Cd dCMP deaminase [Acinetobacter phage 133] gi|299483430|gb|ADJ19524.1| Cd dCMP deaminase [Acinetobacter phage 133] Length = 185 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 52/145 (35%), Gaps = 52/145 (35%) Query: 1 MKKGNVFMSCAL---EEAQNAALRNEIPVGAVAVLNNKIISRAGNR-------------- 43 MK + FM A +E++ + + VGAV N +IIS N Sbjct: 1 MKS-STFMQIAYLVSQESKCVSWK----VGAVIAKNGRIISTGYNGSPAGGVNCCDHASE 55 Query: 44 ---NRELKDV---------------------TAH----AEILAIRMGCRILSQEILPEVD 75 D +AH AE+ AI R + + Sbjct: 56 QNWTTGQYDPAPPHINRVTLKTECRDLHSKWSAHNEIHAELNAILYAAR--NGTAIEGAT 113 Query: 76 LYVTLEPCTMCAAAISLARIRRLYY 100 LYVTL PC CA AI+ + I++L Y Sbjct: 114 LYVTLSPCADCAKAIAQSGIKQLVY 138 >gi|239831592|ref|ZP_04679921.1| riboflavin biosynthesis protein RibD [Ochrobactrum intermedium LMG 3301] gi|239823859|gb|EEQ95427.1| riboflavin biosynthesis protein RibD [Ochrobactrum intermedium LMG 3301] Length = 375 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 45/146 (30%), Gaps = 21/146 (14%) Query: 2 KKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 FM + A+ VG + V + I+ R HAE A+ Sbjct: 15 SDDVRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQAL 70 Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113 YVTLEPC CA + A + R+ A++P G Sbjct: 71 AEAGDAA-----RGATAYVTLEPCAHHGRTPPCAETLVRAGVARVVAAATDPDERVSGKG 125 Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQ 139 A E+ PGI ++ Sbjct: 126 FAILREAG----IEVVPGILADQAAD 147 >gi|300741401|ref|ZP_07071422.1| riboflavin biosynthesis protein RibD [Rothia dentocariosa M567] gi|300380586|gb|EFJ77148.1| riboflavin biosynthesis protein RibD [Rothia dentocariosa M567] Length = 374 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 58/161 (36%), Gaps = 25/161 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59 M MS A+E A+ VGAV +++ +R T HAE Sbjct: 1 MTDDRA-MSLAIEAARQGIRGANPLVGAVITNSAGQVLHIGWHR----GAGTPHAEAD-- 53 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113 + + + + +YV+LEPC C+ AI A I +++Y + G Sbjct: 54 ALAQARAAGTDMSDAKMYVSLEPCNHTGKTGPCSHAIKEAGISQVFYAYPDRSAQASG-G 112 Query: 114 TQFYTLATCHHSPEIYPGISE--QRSRQIIQDFF---KERR 149 ++ + + E S + + +F E+R Sbjct: 113 AEYLRSHGI-----VTTYMREFADDSYALNERWFISVAEKR 148 >gi|156846788|ref|XP_001646280.1| hypothetical protein Kpol_1032p14 [Vanderwaltozyma polyspora DSM 70294] gi|156116955|gb|EDO18422.1| hypothetical protein Kpol_1032p14 [Vanderwaltozyma polyspora DSM 70294] Length = 612 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 59/154 (38%), Gaps = 26/154 (16%) Query: 1 MKKGNVFMSCALEEAQN------AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA 54 ++ +M ALEEA+ A VGA+ +++S +R E HA Sbjct: 460 LQSNKKYMELALEEAKKCPPTKTAFS-----VGAILANGTEVLSTGYSRELEGN---THA 511 Query: 55 EILAIRMGCRILSQEILP-EVDLYVTLEPCT-------MCAAAISLA--RIRRLYYGASN 104 E A+ + + +P LY T+EPC+ C I A RI ++ G Sbjct: 512 EQCALEKYFTKIGKREVPLGSVLYTTMEPCSYRLSGNKPCLERILDAKGRIGSVFVGVLE 571 Query: 105 PKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 P ++N F TL + PG E+ Sbjct: 572 PDT-FVKNNVSFDTLTSNGIDYIQIPGY-EEECI 603 >gi|91773922|ref|YP_566614.1| CMP/dCMP deaminase, zinc-binding [Methanococcoides burtonii DSM 6242] gi|91712937|gb|ABE52864.1| dCMP deaminase [Methanococcoides burtonii DSM 6242] Length = 151 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 44/127 (34%), Gaps = 26/127 (20%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN----------------RNREL 47 F+ A ++ + VGAV V N +I+S N + + Sbjct: 8 DEYFLEIASVVSKRSTCLRNK-VGAVIVRNKRILSTGYNGAPSNMEHCLEIGCIRQQNNI 66 Query: 48 KDVTAH-------AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H AE AI L + +Y T +PC +CA I + I ++ Y Sbjct: 67 ASGTRHEKCRAVHAEQNAIIQAA--LHGVSIGGATVYCTHQPCILCAKMIINSNITKVVY 124 Query: 101 GASNPKG 107 S P Sbjct: 125 STSYPDT 131 >gi|302559850|ref|ZP_07312192.1| riboflavin/cytosine deaminase [Streptomyces griseoflavus Tu4000] gi|302477468|gb|EFL40561.1| riboflavin/cytosine deaminase [Streptomyces griseoflavus Tu4000] Length = 363 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 15/100 (15%) Query: 26 VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83 VGAV V + ++R +R E D HAE A+ + L +Y +LEPC Sbjct: 254 VGAVVVAADGTELARGHSR--EGGDPVVHAEEAAL--AKADPTDPRLATATVYSSLEPCA 309 Query: 84 ------TMCAAAISLARIRRLYYGASNPKG---GGIENGT 114 C I A +RR+ P G +G Sbjct: 310 RRASRPASCVRLILDAGVRRVVTAWREPDTFVEGADGSGV 349 >gi|308161963|gb|EFO64392.1| Hypothetical protein GLP15_944 [Giardia lamblia P15] Length = 306 Score = 65.3 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 4/85 (4%) Query: 49 DVTAHAEILAIR----MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 D+ H +AI +L D++ EPC C+ + AR++R++Y Sbjct: 199 DMLRHPVHIAIEEAMKQAAENDKAYLLTGYDVFALEEPCIFCSMCLLHARVKRVFYSTFM 258 Query: 105 PKGGGIENGTQFYTLATCHHSPEIY 129 GG+ +L +H + Sbjct: 259 RHNGGLNETLMVPSLPGVNHRFPVV 283 >gi|255732273|ref|XP_002551060.1| DRAP deaminase [Candida tropicalis MYA-3404] gi|240131346|gb|EER30906.1| DRAP deaminase [Candida tropicalis MYA-3404] Length = 590 Score = 65.3 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 14/112 (12%) Query: 6 VFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM--G 62 FM A+E+A+ + + VG V V N K+IS +R HAE A+ Sbjct: 438 KFMEMAIEQAEKCGETQTQFNVGCVLVNNGKVISTGHSRELPGN---THAEQCALEKYFA 494 Query: 63 CRILSQEILPEVDLYVTLEPC-------TMCAAAISLA-RIRRLYYGASNPK 106 +E+ +++ T+EPC C I I+ + G P Sbjct: 495 EHDGVKEVPEGTEIFTTMEPCSLRLSGNLPCVDRILETKGIKTCFVGVLEPD 546 >gi|171691546|ref|XP_001910698.1| hypothetical protein [Podospora anserina S mat+] gi|170945721|emb|CAP71834.1| unnamed protein product [Podospora anserina S mat+] Length = 233 Score = 65.3 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 34/95 (35%), Gaps = 17/95 (17%) Query: 26 VGAVAV------LNNKIISRAGNRNRELKDVTAHAEILAIRM--------GCRILSQEIL 71 G V V +I N N + + T H EI AI + E L Sbjct: 66 FGTVIVNHTSANPQGTLICTGSNGNSRIGNPTLHGEIAAINNCSSLFVSSAYNMTPAESL 125 Query: 72 P---EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 ++ LY E C MCAAA+ A R YG Sbjct: 126 AAFKDLTLYTNAESCLMCAAAVRWAGFREYVYGVP 160 >gi|115725150|ref|XP_781375.2| PREDICTED: similar to MGC81193 protein [Strongylocentrotus purpuratus] gi|115958553|ref|XP_001190940.1| PREDICTED: similar to MGC81193 protein [Strongylocentrotus purpuratus] Length = 205 Score = 65.3 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 41/119 (34%), Gaps = 31/119 (26%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-RNRELKD---------- 49 + FMS A AQ + P VGA V K I+ N D Sbjct: 69 DYFMSVAFLSAQRSKD----PSSQVGACIVNEEKKIVGIGYNGMPNGCNDDVLPWSRDSE 124 Query: 50 -------V-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I + IR++ + Sbjct: 125 DWLETKYPYVCHAELNAIMN----KNSADVKGCTMYVALFPCNECAKVIIQSGIRKIVF 179 >gi|323435986|ref|ZP_01049493.2| dCMP deaminase [Dokdonia donghaensis MED134] gi|321496301|gb|EAQ39465.2| dCMP deaminase [Dokdonia donghaensis MED134] Length = 142 Score = 65.3 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 15/111 (13%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT-- 51 K ++ A E + + + VGA+ V + IIS N + ++ T Sbjct: 7 KYDIAYLRMAREWGKLSYCNRKQ-VGAIIVKDKMIISDGYNGTPTGFENVCEDEENNTKW 65 Query: 52 --AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI LY+TL PC C+ + A I+R+ Y Sbjct: 66 YVLHAEANAILKVASSTQSCH--GATLYITLSPCKDCSKLVHQAGIKRVVY 114 >gi|225573949|ref|ZP_03782594.1| hypothetical protein RUMHYD_02043 [Blautia hydrogenotrophica DSM 10507] gi|225038808|gb|EEG49054.1| hypothetical protein RUMHYD_02043 [Blautia hydrogenotrophica DSM 10507] Length = 164 Score = 65.3 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 48/123 (39%), Gaps = 30/123 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------R 43 + FM A Q A +R++ P VGA V +NKI+S N Sbjct: 12 ITWDEYFMGVA----QLAGMRSKDPSSQVGACIVSEDNKILSMGYNGFPIGCSDDDFPWA 67 Query: 44 NRELKDVT-----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + T H+E+ AI L LYVTL PC CA AI + I+ + Sbjct: 68 REGEELETKYLYVTHSELNAILN----YRGGSLEGAKLYVTLFPCNECAKAIIQSGIKTI 123 Query: 99 YYG 101 YG Sbjct: 124 VYG 126 >gi|329938811|ref|ZP_08288207.1| riboflavin/cytosine deaminase [Streptomyces griseoaurantiacus M045] gi|329302302|gb|EGG46194.1| riboflavin/cytosine deaminase [Streptomyces griseoaurantiacus M045] Length = 379 Score = 65.3 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 47/141 (33%), Gaps = 26/141 (18%) Query: 4 GNVFMSCALEEAQN------AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEI 56 ++ A + A+ A VGAV V + ++R +R E D HAE Sbjct: 232 DRRWLGLACDLAERCPPSETAFS-----VGAVVVAADGTELARGFSR--EGGDPAVHAEE 284 Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKG-- 107 A+ L +Y +LEPC CA I A RR+ P Sbjct: 285 AAL--AKVAPGDARLAGATVYSSLEPCARRASRPVPCARLILAAGARRVVTAWREPDTFV 342 Query: 108 -GGIENGTQFYTLATCHHSPE 127 G G A H PE Sbjct: 343 PGADGTGVLTAGGAHVVHLPE 363 >gi|325126599|gb|ADY85929.1| RibD protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 107 Score = 65.3 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 10/78 (12%) Query: 69 EILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 E L +YVTLEPC C I + I+R+ GA++P G A Sbjct: 4 EQLSNSTIYVTLEPCCHYGKQPPCTQLIIDSGIKRVVVGATDPHSLVTGKGIAALRQAGL 63 Query: 123 HHSPEIYPGISEQRSRQI 140 E+ G+ + + Q+ Sbjct: 64 ----EVSTGLLAKEASQL 77 >gi|153816406|ref|ZP_01969074.1| hypothetical protein RUMTOR_02659 [Ruminococcus torques ATCC 27756] gi|317502465|ref|ZP_07960628.1| dCMP deaminase [Lachnospiraceae bacterium 8_1_57FAA] gi|331089291|ref|ZP_08338193.1| hypothetical protein HMPREF1025_01776 [Lachnospiraceae bacterium 3_1_46FAA] gi|145846241|gb|EDK23159.1| hypothetical protein RUMTOR_02659 [Ruminococcus torques ATCC 27756] gi|316896150|gb|EFV18258.1| dCMP deaminase [Lachnospiraceae bacterium 8_1_57FAA] gi|330405843|gb|EGG85372.1| hypothetical protein HMPREF1025_01776 [Lachnospiraceae bacterium 3_1_46FAA] Length = 187 Score = 65.3 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 54/160 (33%), Gaps = 44/160 (27%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR------------NREL 47 FM A+ + P VG V +NKI+S N R+ Sbjct: 37 DEYFMGVAMLSGMRSKD----PNTQVGCCIVSQDNKILSMGYNGFPLGCSDDEFPWVRDG 92 Query: 48 KDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 +D + H+E+ AI S L LYV+L PC CA AI A I+ + Y Sbjct: 93 EDPLETKYVYSTHSELNAILN----YSGGSLAGAKLYVSLFPCNECAKAIIQAGIKEVIY 148 Query: 101 GASNPKGGGIEN-----------GTQFYTLATCHHSPEIY 129 K + G +++ + EI Sbjct: 149 DC--DKYADTPSVIASKRMMDAAGVRYHQYHRTNRKIEIE 186 >gi|295132300|ref|YP_003582976.1| cytidine/deoxycytidylate deaminase family protein [Zunongwangia profunda SM-A87] gi|294980315|gb|ADF50780.1| cytidine/deoxycytidylate deaminase family protein [Zunongwangia profunda SM-A87] Length = 143 Score = 65.3 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 47/134 (35%), Gaps = 29/134 (21%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-------- 52 +K ++ A E ++ + + + VGAV V + IIS N + Sbjct: 7 LKYDKAYLRIAREWSKLSHCKRKQ-VGAVIVKDRMIISDGYNGT-----PSGFENFCEDE 60 Query: 53 ---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 HAE AI LY+T+ PC C+ I A I RL Y Sbjct: 61 EGYTKWYVLHAEANAILKVAASTQS--CQGATLYITMSPCKECSKLIHQAGITRLVY-CV 117 Query: 104 NPKGGGIENGTQFY 117 + K +G F Sbjct: 118 DYKD---NSGLDFL 128 >gi|299115986|emb|CBN75987.1| conserved unknown protein [Ectocarpus siliculosus] Length = 284 Score = 65.3 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 41/120 (34%), Gaps = 31/120 (25%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN---RNRELKDVTA---- 52 + FMS A A + P VGA V +K I+ N D+ Sbjct: 129 DDYFMSVAFLSAMRSKD----PSTQVGACIVNEDKRIVGIGYNGFPMGCSDDDLPWARQA 184 Query: 53 ------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I + IR + Y Sbjct: 185 DDELDTKYPYVCHAEMNAILN----KNSADVKGCLIYVALFPCNECAKLIIQSGIREVVY 240 >gi|291548625|emb|CBL24887.1| Deoxycytidylate deaminase [Ruminococcus torques L2-14] Length = 162 Score = 65.3 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 46/126 (36%), Gaps = 31/126 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR------------N 44 + FM A+ + P VG V +NKI+S N Sbjct: 9 LSWDEYFMGVAMLSGMRSKD----PNTQVGCCIVSQDNKILSMGYNGLPMGCSDDEFPWA 64 Query: 45 RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 RE +D T H+E+ AI + L LYV+L PC CA AI A I+ Sbjct: 65 REGEDPLETKYVYTTHSELNAILN----YNGGSLAGAKLYVSLFPCNECAKAIIQAGIKE 120 Query: 98 LYYGAS 103 + Y Sbjct: 121 VIYDCD 126 >gi|160901692|ref|YP_001567273.1| CMP/dCMP deaminase zinc-binding [Petrotoga mobilis SJ95] gi|160359336|gb|ABX30950.1| CMP/dCMP deaminase zinc-binding [Petrotoga mobilis SJ95] Length = 169 Score = 65.3 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 32/150 (21%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN---RELKDVTA-------- 52 FM A ++ + VGAV V +I++ N+ D Sbjct: 29 DKYFMEVADLVSKRSTCL-HRKVGAVIVKEKRILATGYNQPPSGFPHCDDIGCIRDDLGI 87 Query: 53 ------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE A+ + +Y+T +PC++CA + A I+ +YY Sbjct: 88 KSGENQEICYGLHAEQNALMQAAKFGISTD--NASIYITHQPCSVCARLVINAGIKNVYY 145 Query: 101 GASNPKGGGIENGTQFYTLATCHHSPEIYP 130 + G ++ T+ + TC+ ++ Sbjct: 146 -----REGYPDSLTKLFFD-TCNIQTKVIE 169 >gi|323499282|ref|ZP_08104259.1| putative deoxycytidylate deaminase [Vibrio sinaloensis DSM 21326] gi|323315670|gb|EGA68704.1| putative deoxycytidylate deaminase [Vibrio sinaloensis DSM 21326] Length = 150 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 31/86 (36%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N T HAE AI R L Sbjct: 27 VGAVITKQNRIVSVGFNGYPHGISDSAMTDDREMKYLKTLHAEENAILFAKR-----DLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I I + Sbjct: 82 GCEIWVTHFPCPNCAAKIIQTGISAV 107 >gi|323493550|ref|ZP_08098672.1| putative deoxycytidylate deaminase [Vibrio brasiliensis LMG 20546] gi|323312373|gb|EGA65515.1| putative deoxycytidylate deaminase [Vibrio brasiliensis LMG 20546] Length = 149 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 31/86 (36%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N T HAE AI R L Sbjct: 27 VGAVITKQNRIVSVGFNGYPHGISDSAMTDDREMKYLKTLHAEENAILFAKR-----DLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I I + Sbjct: 82 GCEIWVTHFPCPNCAAKIIQTGISAV 107 >gi|261250832|ref|ZP_05943406.1| putative deoxycytidylate deaminase [Vibrio orientalis CIP 102891] gi|260937705|gb|EEX93693.1| putative deoxycytidylate deaminase [Vibrio orientalis CIP 102891] Length = 149 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 31/86 (36%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N T HAE AI R L Sbjct: 27 VGAVITKQNRIVSVGFNGYPHGISDSAMTDDREMKYLKTLHAEENAILFAKR-----DLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I I + Sbjct: 82 GCEIWVTHFPCPNCAAKIIQTGISAV 107 >gi|255994428|ref|ZP_05427563.1| cytidine/deoxycytidylate deaminase family protein [Eubacterium saphenum ATCC 49989] gi|255993141|gb|EEU03230.1| cytidine/deoxycytidylate deaminase family protein [Eubacterium saphenum ATCC 49989] Length = 155 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 44/123 (35%), Gaps = 27/123 (21%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------RNR 45 + FM A E A VGAV V N I++ N Sbjct: 8 ISWDEYFMRFA-ELAATRTTCLRRSVGAVIVKNKHILATGYNGAPKKVPHCKDLGGCLRE 66 Query: 46 ELKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96 +L + HAE AI +S + + +Y+T +PC +C+ I A I+ Sbjct: 67 KLNVPSGERHELCRALHAEQNAIIQCA--MSGQNIEGATIYITHQPCIICSKMIINAGIK 124 Query: 97 RLY 99 R+ Sbjct: 125 RIV 127 >gi|328872021|gb|EGG20391.1| hypothetical protein DFA_07515 [Dictyostelium fasciculatum] Length = 330 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 31/56 (55%) Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 ++ AH EI+AI+ I + +Y T EPC+MCA+AI +R + + + N Sbjct: 106 NMIAHGEIVAIQNCTEIHGISMYTNYSIYTTGEPCSMCASAILWSRFKTVVWSTYN 161 >gi|291385964|ref|XP_002709531.1| PREDICTED: dCMP deaminase [Oryctolagus cuniculus] Length = 178 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52 FM+ A AQ + N VGA V NKI+ N D TA Sbjct: 17 EYFMAVAFLSAQRSKDPNSQ-VGACIVNAENKIVGIGYNGMPNGCSDDLLPWRRTAENKL 75 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 76 DTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127 >gi|157376789|ref|YP_001475389.1| CMP/dCMP deaminase, zinc-binding [Shewanella sediminis HAW-EB3] gi|157319163|gb|ABV38261.1| CMP/dCMP deaminase, zinc-binding [Shewanella sediminis HAW-EB3] Length = 145 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV NN+I+S N T HAE AI R L Sbjct: 27 VGAVITENNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILHAKR-----DLS 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I +R + Sbjct: 82 SCEIWVTHFPCPNCAAKIIQTGLRAV 107 >gi|295839977|ref|ZP_06826910.1| riboflavin biosynthesis protein RibD [Streptomyces sp. SPB74] gi|295827729|gb|EFG65559.1| riboflavin biosynthesis protein RibD [Streptomyces sp. SPB74] Length = 364 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 50/145 (34%), Gaps = 33/145 (22%) Query: 9 SCALEEAQNAA---LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 A+ A N + VG V + + ++ + HAEI A+ Sbjct: 11 REAIALAARGLGRTRHNPV-VGCVVLDASGEVAGSGWH----SGAAVPHAEIHALARA-- 63 Query: 65 ILSQEILPEV-DLYVTLEPCTM------CAAAISLARIRRLYYGASNP---KGGGIENGT 114 E L V VTLEPC C+ A+ A +RR+ Y ++P GG Sbjct: 64 ----EELSGVDTALVTLEPCDHTGRTGPCSRALIEAGVRRVVYAVADPTDQATGGAGT-- 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139 A ++ G+ E + Sbjct: 118 --LRAAGL----DVEHGLLEAEAAD 136 >gi|189485251|ref|YP_001956192.1| deoxycytidylate deaminase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287210|dbj|BAG13731.1| deoxycytidylate deaminase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 163 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 41/120 (34%), Gaps = 28/120 (23%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42 FM A ++ + VGAV V + +I++ N Sbjct: 13 DEYFMKLAWLVSERSTCVRHH-VGAVIVRDKRILTTGYNGAATDMQDCISLGCLRNTLNI 71 Query: 43 ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 + E+ HAE AI G + + LY T PC +CA A I+R+ Sbjct: 72 LSGQRHEICRAI-HAEQNAIIQGG--YHGINIKDSTLYCTHSPCVLCAKITVNAGIKRVI 128 >gi|218281132|ref|ZP_03487667.1| hypothetical protein EUBIFOR_00228 [Eubacterium biforme DSM 3989] gi|218217646|gb|EEC91184.1| hypothetical protein EUBIFOR_00228 [Eubacterium biforme DSM 3989] Length = 159 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 37/131 (28%), Positives = 48/131 (36%), Gaps = 26/131 (19%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGN--------------RNR 45 + FM A A + N VGA V K ++ N R+ Sbjct: 6 LSWDQYFMGMAHLSAMRSKDPN-TRVGACIVNPQKRVVGLGYNGFPYGCEDDEFPWERDG 64 Query: 46 ELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E D HAE+ AI + S + L LYV+L PC CA AI A I + Y Sbjct: 65 EFLDTKYPYVVHAELNAI-----LNSIQDLHGCTLYVSLFPCNECAKAIIQAGITCVVY- 118 Query: 102 ASNPKGGGIEN 112 S+ G N Sbjct: 119 ESDKYDGTEGN 129 >gi|255729574|ref|XP_002549712.1| hypothetical protein CTRG_04009 [Candida tropicalis MYA-3404] gi|240132781|gb|EER32338.1| hypothetical protein CTRG_04009 [Candida tropicalis MYA-3404] Length = 325 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 10/95 (10%) Query: 45 RELKDVTAHAEILAI----------RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 + + H+ + AI R + ++ +Y T EPC MC A+ +R Sbjct: 207 NKKNNPKGHSIMKAISEIATREIENRKNKEHDRGYLCTDMIVYTTHEPCIMCCMALVHSR 266 Query: 95 IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 I R+ Y + GG+E+ + + +I+ Sbjct: 267 IARVTYINTAKNSGGLESHYHLGVIDGLNWKFQIW 301 >gi|156055334|ref|XP_001593591.1| hypothetical protein SS1G_05018 [Sclerotinia sclerotiorum 1980] gi|154702803|gb|EDO02542.1| hypothetical protein SS1G_05018 [Sclerotinia sclerotiorum 1980 UF-70] Length = 358 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 37/122 (30%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---------------RNRE 46 FM A AQ + R VG V V ++IS N R E Sbjct: 203 DQYFMQLASLAAQRSNCMKRR---VGCVLVREKRVISTGYNGTPRGLLNCGEGGCPRCNE 259 Query: 47 LKDV--------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + HAE A+ R +E LY PC C+ I I + Sbjct: 260 GQSCGVGLGTCLCLHAEENALLEAGRERVREN---AILYCDTCPCLTCSIKIVQVGISEV 316 Query: 99 YY 100 Y Sbjct: 317 VY 318 >gi|328768239|gb|EGF78286.1| hypothetical protein BATDEDRAFT_26851 [Batrachochytrium dendrobatidis JAM81] Length = 156 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 22/117 (18%) Query: 3 KGNVFMSCALEEAQNAALRNEIP------VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56 + +M A+ EA + IP VGAV VL+ + +R HAE Sbjct: 9 QDQAYMKLAIAEANKS-----IPSESAYCVGAVLVLHPSTVYTGYSRELPGN---THAEQ 60 Query: 57 LAIRMGCRI-LSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNP 105 + + L + + + +Y T+EPC C + A I ++ G P Sbjct: 61 VCLIKASHAGLDLDRMRDAIMYTTMEPCSLRLSGNLPCVNRLIDAGISKVLIGILEP 117 >gi|332157817|ref|YP_004423096.1| dCMP deaminase, putative [Pyrococcus sp. NA2] gi|331033280|gb|AEC51092.1| dCMP deaminase, putative [Pyrococcus sp. NA2] Length = 182 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 39/117 (33%), Gaps = 24/117 (20%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNR--NRELKDV------ 50 K FM A + A P VGAVAV + I++ N + Sbjct: 21 TKDEYFMLIAKLVSLRATC----PRLRVGAVAVKDGYILATGYNGAPRNMDHCIDVGCIM 76 Query: 51 -------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE I M R L LYVT PC C + A I+ + Y Sbjct: 77 VDGHCHRAVHAEQNVIAMAARKGIS--LEGATLYVTHFPCDTCLKLLINAGIKEIVY 131 >gi|197302162|ref|ZP_03167221.1| hypothetical protein RUMLAC_00888 [Ruminococcus lactaris ATCC 29176] gi|197298593|gb|EDY33134.1| hypothetical protein RUMLAC_00888 [Ruminococcus lactaris ATCC 29176] Length = 164 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 55/161 (34%), Gaps = 40/161 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR------------N 44 + FM A+ + P VG V +NKI+S N Sbjct: 11 LSWDEYFMGVAMLSGMRSKD----PNTQVGCCIVSQDNKILSMGYNGLPIGCSDDEFPWA 66 Query: 45 RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 RE +D T H+E+ AI S L LYV+L PC CA AI + I+ Sbjct: 67 REGEDPLDTKYVYTTHSELNAILN----YSGGSLAGAKLYVSLFPCNECAKAIIQSGIKE 122 Query: 98 LYYGASN----PKGGGIEN-----GTQFYTLATCHHSPEIY 129 + Y P + G +++ + EI Sbjct: 123 VIYDCDKYAHTPAVMASKRMMDAAGVRYHQYHRTNRKIEIE 163 >gi|66358600|ref|XP_626478.1| dCMP deaminase, Dcd1p like [Cryptosporidium parvum Iowa II] gi|46227806|gb|EAK88726.1| dCMP deaminase, Dcd1p like [Cryptosporidium parvum Iowa II] Length = 373 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 38/129 (29%), Gaps = 45/129 (34%) Query: 4 GNVFMSCALEEA--------QNAALRNEIPVGAVAVLNNKIISRAGN------------- 42 FM A + A + VG+V V + KIIS N Sbjct: 225 DEYFMKIA-KLASQRSNCVSRK--------VGSVIVKDKKIISTGYNGTPKNMKNCFEGG 275 Query: 43 -------RNRELKD----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAIS 91 E K HAE A+ + +YVTL PC C I Sbjct: 276 CTRCSNPNRVEGKSLETCSCMHAETNALLFA----GIDKCIGATIYVTLMPCISCTKNII 331 Query: 92 LARIRRLYY 100 I R+ + Sbjct: 332 QCEIERVVF 340 >gi|91791447|ref|YP_561098.1| CMP/dCMP deaminase, zinc-binding [Shewanella denitrificans OS217] gi|91713449|gb|ABE53375.1| CMP/dCMP deaminase, zinc-binding [Shewanella denitrificans OS217] Length = 147 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 18/87 (20%) Query: 26 VGAVAVLNNKIISRAGN-------RNRELKDV------TAHAEILAIRMGCRILSQEILP 72 VGAV +N+I+S N + E D T HAE AI R L Sbjct: 27 VGAVITKHNRIVSVGFNGYPHGISDSAETDDRDMKLLKTLHAEENAILFAKR-----DLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLY 99 D++VT PC CAA I I ++ Sbjct: 82 GCDIWVTHFPCPNCAAKIIQTGITGVF 108 >gi|168065799|ref|XP_001784834.1| predicted protein [Physcomitrella patens subsp. patens] gi|162663588|gb|EDQ50344.1| predicted protein [Physcomitrella patens subsp. patens] Length = 162 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 35/139 (25%), Positives = 48/139 (34%), Gaps = 36/139 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII--SRAGN------------- 42 + + FM+ A A+ + P VGA V +++I N Sbjct: 12 LSWDDYFMAIAFLSAKRSKD----PNRQVGACIVSQDRVILAGIGYNGFPRGCSDDQLPW 67 Query: 43 -RNRELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 + + D HAE+ AI + LYVTL PC CA I A Sbjct: 68 AKKSQSGDPLQTKYPYVCHAEVNAILNKNHASA----SGQRLYVTLFPCNECAKIIIQAG 123 Query: 95 IRRLYYGASNPKGGGIENG 113 I + Y KG IEN Sbjct: 124 IAEVVY--YTDKGAHIENN 140 >gi|109290173|ref|YP_656422.1| dCMP deaminase [Aeromonas phage 25] gi|104345846|gb|ABF72746.1| dCMP deaminase [Aeromonas phage 25] Length = 172 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 40/109 (36%), Gaps = 36/109 (33%) Query: 26 VGAVAVLNNKIISRAGNRNRELK---------------DVT------------------- 51 VGA+ + +IIS N D+T Sbjct: 24 VGAIISKDGRIISTGYNGTPAGCNHANCDDHAKKSGWLDLTVRLRGMYRQAHSEWSKANE 83 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +++VT+ PC CA AI+ + I+R+ Y Sbjct: 84 IHAELNAILYAAKTGQS--IDGAEMHVTVSPCPDCAKAIAQSGIKRVVY 130 >gi|315056975|ref|XP_003177862.1| hypothetical protein MGYG_08953 [Arthroderma gypseum CBS 118893] gi|311339708|gb|EFQ98910.1| hypothetical protein MGYG_08953 [Arthroderma gypseum CBS 118893] Length = 348 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 37/122 (30%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50 FM A AQ + R VG V V +N+++S N E Sbjct: 187 DQYFMQLASLAAQRSNCMKRR---VGCVVVKDNRVMSTGYNGTPRNVKNCNEGGCPRCNL 243 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE A+ R E LY PC C+ I+ I + Sbjct: 244 GQAGGTVLSTCLCIHAEENALLEAGRQRIGE---GSILYCDTCPCLTCSVKIAQVGISEV 300 Query: 99 YY 100 Y Sbjct: 301 VY 302 >gi|152964349|ref|YP_001360133.1| CMP/dCMP deaminase zinc-binding [Kineococcus radiotolerans SRS30216] gi|151358866|gb|ABS01869.1| CMP/dCMP deaminase zinc-binding [Kineococcus radiotolerans SRS30216] Length = 201 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 47/150 (31%), Gaps = 14/150 (9%) Query: 9 SCAL--EEAQNAALRN-EIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGC 63 AL A P AV + +I+S N + HAE+ A+ + Sbjct: 35 RMALVHRLAGRNFREGNGGPFAAVVADSGSGEIVSVGVNVVLSTGISSGHAEVAALGLAQ 94 Query: 64 RILSQEIL----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGGIENGTQ 115 L +L V PC C A + +R L S P+ G E + Sbjct: 95 VRTGSWDLGADGARRELVVNWRPCAQCYGATLWSGVRTLVVAGSGPELEEITGFDEGPVR 154 Query: 116 FYTLATCHHS-PEIYPGISEQRSRQIIQDF 144 A + + + + + +D+ Sbjct: 155 EDWAAQFEARGIAVVSDVLREEALAVYRDY 184 >gi|326203244|ref|ZP_08193109.1| CMP/dCMP deaminase zinc-binding [Clostridium papyrosolvens DSM 2782] gi|325986502|gb|EGD47333.1| CMP/dCMP deaminase zinc-binding [Clostridium papyrosolvens DSM 2782] Length = 145 Score = 64.9 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGAV V + +I++ N +L + HAE AI Sbjct: 27 VGAVIVKDKRILATGYNGAPVGCKHCSEVGCMREKLNIPSGQRHELCRAIHAEQNAIVQA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 S + LYVT +PC +CA A I R+ + Sbjct: 87 A--YSGTSVSGATLYVTNQPCVLCAKLAINAGIVRIVF 122 >gi|253743502|gb|EES99877.1| Hypothetical protein GL50581_2888 [Giardia intestinalis ATCC 50581] Length = 282 Score = 64.9 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 28/72 (38%) Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 A+ +L D++ EPC C+ + ARIRR++Y GG+ Sbjct: 208 AMAQAADTDEAYLLTGYDVFTLEEPCIFCSMCLLHARIRRVFYSVPMEHNGGLNESLMVP 267 Query: 118 TLATCHHSPEIY 129 L +H + Sbjct: 268 ALPGVNHKFPVI 279 >gi|242399255|ref|YP_002994679.1| Deoxycytidylate deaminase [Thermococcus sibiricus MM 739] gi|242265648|gb|ACS90330.1| Deoxycytidylate deaminase [Thermococcus sibiricus MM 739] Length = 180 Score = 64.9 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 33/117 (28%), Positives = 40/117 (34%), Gaps = 24/117 (20%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNR--NRELKDV------ 50 K FM A + LR P VGAVAV + I++ N + Sbjct: 21 TKDEYFMLIA----KLVGLRATCPRLKVGAVAVKDGYILATGYNGAPRNMDHCIDVGCLV 76 Query: 51 -------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE I M R L LYVT PC C + A IR + Y Sbjct: 77 VDGHCHRAVHAEQNVIAMAARKGIS--LEGATLYVTHFPCDTCFKLLVNAGIREIIY 131 >gi|227432567|ref|ZP_03914548.1| competence protein ComEB [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351675|gb|EEJ41920.1| competence protein ComEB [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 158 Score = 64.9 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRE-------------LKDVTA--HAEILAIRMGCRILSQEI 70 VGA+ V +N+II+ N + HAE A+ ++ Sbjct: 30 VGAIIVRDNRIIASGYNGSVSGTPHCTEVGDLMVDGHCIRAVHAEQNALMQAAKMGIT-- 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + ++YVT PC C + A I ++Y+ Sbjct: 88 IDGSEVYVTDVPCVQCTKLLLQAGINKIYF 117 >gi|311069161|ref|YP_003974084.1| hypothetical protein BATR1942_11110 [Bacillus atrophaeus 1942] gi|310869678|gb|ADP33153.1| hypothetical protein BATR1942_11110 [Bacillus atrophaeus 1942] Length = 189 Score = 64.9 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 46/125 (36%), Gaps = 25/125 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRE----------- 46 + FM+ + A + P VGA V + ++I+ N + Sbjct: 4 ISWNQYFMAQSHLLALRSTC----PRLSVGATIVRDKRMIAGGYNGSIAGGVHCADEGCF 59 Query: 47 ----LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102 T HAE+ AI + ++YVT PC C +I A I+ +Y+ A Sbjct: 60 LIDDHCARTIHAEMNAILQCSKFGVPT--EGAEIYVTHYPCIQCCKSIIQAGIKTVYF-A 116 Query: 103 SNPKG 107 + K Sbjct: 117 EDYKT 121 >gi|291278901|ref|YP_003495736.1| CMP/dCMP deaminase zinc-binding protein [Deferribacter desulfuricans SSM1] gi|290753603|dbj|BAI79980.1| CMP/dCMP deaminase, zinc-binding protein [Deferribacter desulfuricans SSM1] Length = 149 Score = 64.9 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 34/98 (34%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGN---RNRELKDVTA--------------------HAEILAIRMG 62 VGAV V + +I++ N R T HAE AI Sbjct: 27 VGAVIVKDRQILATGYNGVPRGITHCSETGCLRQKLNVPSGQRHELCRGLHAEQNAIIQA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + +Y +PC++C I A I+R+ + Sbjct: 87 A--YHGVSIKGATIYTNAKPCSICTKMIINAGIKRIVF 122 >gi|62955247|ref|NP_001017639.1| deoxycytidylate deaminase [Danio rerio] gi|62202187|gb|AAH92809.1| DCMP deaminase [Danio rerio] Length = 201 Score = 64.9 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKD-------VTA---- 52 FM+ A AQ + N VGA V NKI+ N D +A Sbjct: 32 EYFMAVAFLSAQRSKDPNSQ-VGACIVNQENKIVGIGYNGMPNGCDDDLLPWSRSADNKL 90 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + Y Sbjct: 91 DTKYPYVCHAELNAIMN----KNSADVKGCSIYVALFPCNECAKLIIQAGIKDVIY 142 >gi|88798973|ref|ZP_01114554.1| putative deoxycytidylate deaminase [Reinekea sp. MED297] gi|88778200|gb|EAR09394.1| putative deoxycytidylate deaminase [Reinekea sp. MED297] Length = 149 Score = 64.9 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 32/86 (37%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N T HAE AI R L Sbjct: 27 VGAVITEQNRIVSLGFNGYPHGISDSAETDDREMKLLKTLHAEENAILFAKR-----NLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 + D++VT PC CAA I I + Sbjct: 82 DCDIWVTHFPCPNCAAKIIQTGISTV 107 >gi|312876091|ref|ZP_07736079.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus 6A] gi|311797077|gb|EFR13418.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus 6A] Length = 154 Score = 64.9 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGA+ V + +I++ N +L + HAE AI Sbjct: 27 VGALIVKDKRILATGYNGAPTGLPHCEEVGCLREKLNVPSGQRHELCRGLHAEQNAIIQA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + ++ +Y T PC +CA I A I+++ Y Sbjct: 87 AK--MGVVIDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122 >gi|296828108|ref|XP_002851276.1| deoxycytidylate deaminase [Arthroderma otae CBS 113480] gi|238838830|gb|EEQ28492.1| deoxycytidylate deaminase [Arthroderma otae CBS 113480] Length = 349 Score = 64.9 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 37/123 (30%), Gaps = 32/123 (26%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50 FM A AQ + R VG V V +N+++S N E Sbjct: 187 DQYFMQLASLAAQRSNCMKRR---VGCVIVKDNRVMSTGYNGTPRKMKNCNEGGCPRCNL 243 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLE-PCTMCAAAISLARIRR 97 HAE A+ R E LY PC C+ I+ I Sbjct: 244 GQAGGTVLSTCLCMHAEENALLEAGRQRIGE---GSILYCNTSCPCLTCSVKIAQLGISE 300 Query: 98 LYY 100 + Y Sbjct: 301 VVY 303 >gi|81428680|ref|YP_395680.1| putative type II secretion/competence system, dCMP deaminase ComEB-like [Lactobacillus sakei subsp. sakei 23K] gi|78610322|emb|CAI55371.1| Putative bacterial type II secretion/competence system, DCMP deaminase ComEB-like [Lactobacillus sakei subsp. sakei 23K] Length = 162 Score = 64.9 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70 VGA+ + N +II+ N + +D T HAE+ A+ + Q Sbjct: 30 VGALVIRNRRIIAGGYNGSVAHEDHCIDVGCLMRDGHCLRTIHAEMNALTQCAKFGVQT- 88 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++YVT PC C I A I +++Y Sbjct: 89 -EGAEIYVTHFPCLQCTKLIIQAGISKIHY 117 >gi|118580021|ref|YP_901271.1| CMP/dCMP deaminase [Pelobacter propionicus DSM 2379] gi|118502731|gb|ABK99213.1| CMP/dCMP deaminase, zinc-binding protein [Pelobacter propionicus DSM 2379] Length = 155 Score = 64.9 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 36/105 (34%), Gaps = 27/105 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGA+ V + I++ N L + HAE AI Sbjct: 28 VGALLVKDRNILATGYNGAPSGISHCSEAGCLRERLNVPSGERHELCRGLHAEQNAIIQA 87 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNP 105 R + LY T PC +C + A IRR+ + G ++ Sbjct: 88 ARHGVN--IDGATLYCTTMPCVICTKMLINAGIRRVVFDEGYADD 130 >gi|114564723|ref|YP_752237.1| CMP/dCMP deaminase, zinc-binding [Shewanella frigidimarina NCIMB 400] gi|114336016|gb|ABI73398.1| CMP/dCMP deaminase, zinc-binding [Shewanella frigidimarina NCIMB 400] Length = 144 Score = 64.9 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV NN+I+S N T HAE AI R L Sbjct: 27 VGAVITENNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILHAKR-----DLS 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I +R + Sbjct: 82 SCEIWVTHFPCPNCAAKIIQTGLRAV 107 >gi|212528774|ref|XP_002144544.1| deoxycytidylate deaminase, putative [Penicillium marneffei ATCC 18224] gi|210073942|gb|EEA28029.1| deoxycytidylate deaminase, putative [Penicillium marneffei ATCC 18224] Length = 354 Score = 64.9 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 39/122 (31%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---RNRELKD--------- 49 FM A AQ + R VG V V + ++IS N RN + Sbjct: 193 DQYFMQLASLAAQRSNCMKRR---VGCVIVRDRRVISTGYNGTPRNITNCNEGGCPRCNR 249 Query: 50 -----------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + HAE A+ R +E LY PC C I+ I + Sbjct: 250 GEGGGAGLSTCLCIHAEENALLEAGRERIRE---GAILYCDTCPCLTCTVKIAQVGISEV 306 Query: 99 YY 100 Y Sbjct: 307 VY 308 >gi|238917857|ref|YP_002931374.1| dCMP deaminase [Eubacterium eligens ATCC 27750] gi|238873217|gb|ACR72927.1| dCMP deaminase [Eubacterium eligens ATCC 27750] Length = 159 Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 46/123 (37%), Gaps = 28/123 (22%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------R 43 + FM A + +R++ P VGA V +NKI+S N Sbjct: 9 ISWDEYFMGIA----TLSGMRSKDPNTQVGACIVSQDNKILSMGYNGLPRGCSDDEFPWN 64 Query: 44 NRELKDV---TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + T H+E+ AI L LYVTL PC CA AI A I+ + Y Sbjct: 65 RDGEDNKYFYTTHSELNAILN----YRGGSLDNAKLYVTLFPCNECAKAIIQAGIKTVVY 120 Query: 101 GAS 103 Sbjct: 121 DCD 123 >gi|242765520|ref|XP_002340990.1| deoxycytidylate deaminase, putative [Talaromyces stipitatus ATCC 10500] gi|218724186|gb|EED23603.1| deoxycytidylate deaminase, putative [Talaromyces stipitatus ATCC 10500] Length = 388 Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 39/122 (31%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---RNRELKD--------- 49 FM A AQ + R VG V V + ++IS N RN + Sbjct: 227 DQYFMQLASLAAQRSNCMKRR---VGCVIVRDKRVISTGYNGTPRNITNCNEGGCPRCNR 283 Query: 50 -----------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + HAE A+ R +E LY PC C I+ I + Sbjct: 284 GEGGGAGLSTCLCIHAEENALLEAGRERIRE---GAILYCDTCPCLTCTVKIAQVGISEV 340 Query: 99 YY 100 Y Sbjct: 341 VY 342 >gi|213965573|ref|ZP_03393767.1| riboflavin biosynthesis protein RibD [Corynebacterium amycolatum SK46] gi|213951732|gb|EEB63120.1| riboflavin biosynthesis protein RibD [Corynebacterium amycolatum SK46] Length = 350 Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 18/113 (15%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCR 64 M+ A+E Q P+G V + I + AG HAE A+ M Sbjct: 19 MALAIEAGQRVRGTTYPNPPIGCVILDTAGIAVGVAGTEPVGG----RHAEPQALEMAG- 73 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111 VTLEPC C A++ A + R+ + ++P Sbjct: 74 ----PRAQGGTAVVTLEPCNHIGRTPPCTEALAAAGVSRVIFAVADPNPVAAG 122 >gi|225570086|ref|ZP_03779111.1| hypothetical protein CLOHYLEM_06182 [Clostridium hylemonae DSM 15053] gi|225161556|gb|EEG74175.1| hypothetical protein CLOHYLEM_06182 [Clostridium hylemonae DSM 15053] Length = 162 Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 55/155 (35%), Gaps = 36/155 (23%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR------------N 44 + FM A+ + P VG V +NKI+S N + Sbjct: 9 ISWDEYFMGVAMLSGMRSKD----PNTQVGCCIVSQDNKILSMGYNGLPIGCSDDEFPWD 64 Query: 45 RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 RE +D T H+E+ AI L LYV+L PC CA AI + I+ Sbjct: 65 REGEDPLETKYVYTVHSELNAILN----YRGGSLEGAKLYVSLFPCNECAKAIIQSGIKE 120 Query: 98 LYYGASN-PKGGGIENGTQFYTLATC----HHSPE 127 + + + ++ + + A +H E Sbjct: 121 VIFDCNKYEDTAAVKASMRMFDAAGVRYHQYHRTE 155 >gi|310722262|ref|YP_003969086.1| dCMP deaminase [Aeromonas phage phiAS4] gi|306021105|gb|ADM79640.1| dCMP deaminase [Aeromonas phage phiAS4] Length = 172 Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 39/109 (35%), Gaps = 36/109 (33%) Query: 26 VGAVAVLNNKIISRAGNRN-----RELKDVTA---------------------------- 52 VGA+ + +IIS N D A Sbjct: 24 VGAIISKDGRIISTGYNGTPAGCNHANCDDHAKKSGWLDSYGKLRGMYRQAHSEWSKANE 83 Query: 53 -HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +++VT+ PC CA AI+ + I+R+ Y Sbjct: 84 IHAELNAILYAAKTGQS--IDGAEMHVTVSPCPDCAKAIAQSGIKRVVY 130 >gi|229493689|ref|ZP_04387474.1| riboflavin biosynthesis protein RibD [Rhodococcus erythropolis SK121] gi|229319650|gb|EEN85486.1| riboflavin biosynthesis protein RibD [Rhodococcus erythropolis SK121] Length = 350 Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 36/118 (30%), Gaps = 19/118 (16%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 PVGAV + + I+ + HAE++A+ VTLEPC Sbjct: 35 PVGAVILAADGTIA-GVGMTQPPGGP--HAEVVALDEAGDAA-----RGGTAVVTLEPCN 86 Query: 85 M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136 C+ A+ A + + Y +P + G+ Sbjct: 87 HQGRTGPCSQALIDAGVSAVVYAVGDPNPEASGGAATLMRA-----GISVTAGLRAPE 139 >gi|226306507|ref|YP_002766467.1| riboflavin biosynthesis bifunctional protein RibG [Rhodococcus erythropolis PR4] gi|226185624|dbj|BAH33728.1| riboflavin biosynthesis bifunctional protein RibG [Rhodococcus erythropolis PR4] Length = 350 Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 36/118 (30%), Gaps = 19/118 (16%) Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 PVGAV + + I+ + HAE++A+ VTLEPC Sbjct: 35 PVGAVILAADGTIA-GVGMTQPPGGP--HAEVVALDEAGDAA-----RGGTAVVTLEPCN 86 Query: 85 M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136 C+ A+ A + + Y +P + G+ Sbjct: 87 HQGRTGPCSQALIDAGVSAVVYAVGDPNPEASGGAATLMRA-----GISVTAGLRAPE 139 >gi|261367306|ref|ZP_05980189.1| putative deoxycytidylate deaminase [Subdoligranulum variabile DSM 15176] gi|282570909|gb|EFB76444.1| putative deoxycytidylate deaminase [Subdoligranulum variabile DSM 15176] Length = 159 Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 42/119 (35%), Gaps = 24/119 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNR----NRELKDV----- 50 + FM AL A + N VGA V NKI+S N + Sbjct: 7 ISWDEYFMGIALLSAMRSKDNNSQ-VGACIVSPENKILSLGYNGMPIGCNDDDMPWEREG 65 Query: 51 ---------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 H+E+ AI L +YVTL PC CA AI + I+ L Y Sbjct: 66 DDLNTKYMYVCHSELNAILN----SPHNDLTGARMYVTLFPCNECAKAIIQSGIKELIY 120 >gi|222528649|ref|YP_002572531.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor bescii DSM 6725] gi|222455496|gb|ACM59758.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor bescii DSM 6725] Length = 148 Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGA+ V + +I++ N +L + HAE AI Sbjct: 27 VGALIVKDKRILATGYNGAPTGLPHCDEVGCLREKLNVPSGQRHELCRGLHAEQNAIIQA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + ++ +Y T PC +CA I A I+++ Y Sbjct: 87 AK--MGVVIDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122 >gi|14591367|ref|NP_143445.1| deoxycytidylate deaminase [Pyrococcus horikoshii OT3] gi|3258018|dbj|BAA30701.1| 182aa long hypothetical deoxycytidylate deaminase [Pyrococcus horikoshii OT3] Length = 182 Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 39/117 (33%), Gaps = 24/117 (20%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNR--NRELKDV------ 50 K FM A + A P VGAVAV + I++ N + Sbjct: 21 TKDEYFMLIAKLVSLRATC----PRLRVGAVAVKDGYILATGYNGAPRNMDHCIDVGCIM 76 Query: 51 -------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE I M R L LYVT PC C + A I+ + Y Sbjct: 77 VDGHCHRAVHAEQNVIAMAARKGIS--LEGATLYVTHFPCDTCLKLLINAGIKEIVY 131 >gi|312080683|ref|XP_003142705.1| dCMP deaminase [Loa loa] gi|307762130|gb|EFO21364.1| dCMP deaminase [Loa loa] Length = 206 Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 45/125 (36%), Gaps = 31/125 (24%) Query: 5 NVFMSCALEEAQNAALRNEIPV---GAVAVLNNK-IISRAGN----------------RN 44 FM A A + PV GAV V +K I+ N Sbjct: 48 EYFMGVAHMAALRSKD----PVTQVGAVIVNQDKRIVGSGYNGMPTGCSDDILPWSKGSE 103 Query: 45 RELKDVTA---HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 L++ +A HAE+ AI +I+ + +Y L PC CA I A I + + Sbjct: 104 NFLENKSAYVCHAEMNAILN--KIVGS--IKGSTIYTVLFPCNECAKLIIQAGISEVVFQ 159 Query: 102 ASNPK 106 PK Sbjct: 160 REKPK 164 >gi|312128227|ref|YP_003993101.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor hydrothermalis 108] gi|311778246|gb|ADQ07732.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor hydrothermalis 108] Length = 154 Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGA+ V + +I++ N +L + HAE AI Sbjct: 27 VGALIVKDKRILATGYNGAPTGLPHCEEVGCLREKLNVPSGQRHELCRGLHAEQNAIIQA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + ++ +Y T PC +CA I A I+++ Y Sbjct: 87 AK--MGVVIDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122 >gi|312134555|ref|YP_004001893.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor owensensis OL] gi|311774606|gb|ADQ04093.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor owensensis OL] Length = 154 Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGA+ V + +I++ N +L + HAE AI Sbjct: 27 VGALIVKDKRILATGYNGAPTGLPHCEEVGCLREKLNVPSGQRHELCRGLHAEQNAIIQA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + ++ +Y T PC +CA I A I+++ Y Sbjct: 87 AK--MGVVIDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122 >gi|189192458|ref|XP_001932568.1| dCMP deaminase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187974174|gb|EDU41673.1| dCMP deaminase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 380 Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 32/96 (33%), Gaps = 24/96 (25%) Query: 26 VGAVAVLNNKIISRAGN---RNRELKD------------------VTAHAEILAIRMGCR 64 VGAV V + +IIS N R + + HAE A+ R Sbjct: 223 VGAVIVRDRRIISTGYNGTSRRNTNCNQGGCARCNSGTSGSLSACICLHAEENALLEAGR 282 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E LY PC CA I+ I + Y Sbjct: 283 ERIGE---GATLYCNTCPCLTCATKITQVGITEVVY 315 >gi|312623042|ref|YP_004024655.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor kronotskyensis 2002] gi|312203509|gb|ADQ46836.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor kronotskyensis 2002] Length = 148 Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGA+ V + +I++ N +L + HAE AI Sbjct: 27 VGALIVKDKRILATGYNGAPTGIPHCDEVGCLREKLNVPSGQRHELCRGLHAEQNAIIQA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + ++ +Y T PC +CA I A I+++ Y Sbjct: 87 AK--MGVVIDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122 >gi|167395901|ref|XP_001741796.1| tRNA-specific adenosine deaminase subunit TAD3 [Entamoeba dispar SAW760] gi|165893489|gb|EDR21735.1| tRNA-specific adenosine deaminase subunit TAD3, putative [Entamoeba dispar SAW760] Length = 287 Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 1/86 (1%) Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 E HA A++ + DL+ T EPC MC A+ +R R+++ Sbjct: 198 TIESNHPLLHAPFNALQSIPLNHKHYLCTGFDLFTTHEPCLMCGMALLHSRFGRVFFIHQ 257 Query: 104 NPKGGGIENGTQFYTLATCHHSPEIY 129 + G +H +Y Sbjct: 258 HKTNGAF-TVHHLNKKKQLNHHFNVY 282 >gi|319946726|ref|ZP_08020960.1| competence protein comEB [Streptococcus australis ATCC 700641] gi|319746774|gb|EFV99033.1| competence protein comEB [Streptococcus australis ATCC 700641] Length = 163 Score = 64.5 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 41/112 (36%), Gaps = 19/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE------LKDV------- 50 F + AL + A + VGAV V ++K+++ N + D Sbjct: 17 DEYFAAQALLISNRATCKRAK-VGAVLVKDHKVVATGYNGSVSGTEHCLDHDCLMVEGHC 75 Query: 51 --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI G + YVT PC C + +R+ Y Sbjct: 76 VRTLHAEVNAILQGAERGIPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 124 >gi|19113234|ref|NP_596442.1| deoxycytidylate deaminase (predicted) [Schizosaccharomyces pombe 972h-] gi|74626715|sp|O43012|DCTD_SCHPO RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP deaminase gi|2956780|emb|CAA17893.1| deoxycytidylate deaminase (predicted) [Schizosaccharomyces pombe] Length = 348 Score = 64.5 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 37/122 (30%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50 + FM A A+ + R VG V V N++I+ N E Sbjct: 201 DSYFMEMASLAAKRSNCMKRR---VGCVLVRGNRVIATGYNGTPRGATNCNEGGCPRCNS 257 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE A+ R LY PC C+ I+ I+ + Sbjct: 258 ASSCGKELDTCLCLHAEENALLEAGRERVG---NNAILYCDTCPCLTCSVKITQLGIKEV 314 Query: 99 YY 100 Y Sbjct: 315 VY 316 >gi|296134383|ref|YP_003641630.1| CMP/dCMP deaminase zinc-binding protein [Thermincola sp. JR] gi|296032961|gb|ADG83729.1| CMP/dCMP deaminase zinc-binding protein [Thermincola potens JR] Length = 147 Score = 64.5 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGN---RNRELKDVTA--------------------HAEILAIRMG 62 VGAV V +N+I++ N R D T HAE I Sbjct: 27 VGAVIVRDNRILASGYNGPPRGLRHCDETGCLRDKLNIPSGERHELCRGLHAEQNVIIQA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + + Y+T +PC +CA I A I+++ Y Sbjct: 87 A--MHGINIQGGTFYITHQPCILCAKMIVNAGIKKVVY 122 >gi|289742059|gb|ADD19777.1| tRNA-specific adenosine-34 deaminase subunit [Glossina morsitans morsitans] Length = 344 Score = 64.5 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 36/71 (50%) Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + D+Y++ EPC MC+ A+ +R++R+++ + G ++ + + + Sbjct: 273 AKFGPYLCTGYDVYLSQEPCLMCSMALLHSRVKRIFFLYESKINGSLKTNFKLQQVKDLN 332 Query: 124 HSPEIYPGISE 134 H E+Y ++E Sbjct: 333 HHYEVYQFVAE 343 >gi|14520789|ref|NP_126264.1| dCMP deaminase, putative [Pyrococcus abyssi GE5] gi|5458005|emb|CAB49495.1| dCMP deaminase, putative [Pyrococcus abyssi GE5] Length = 182 Score = 64.5 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 39/117 (33%), Gaps = 24/117 (20%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNR--NRELKDV------ 50 K FM A + A P VGAVAV + I++ N + Sbjct: 21 TKDEYFMLIAKLVSLRATC----PRLRVGAVAVKDGYILATGYNGAPRNMDHCIDVGCIM 76 Query: 51 -------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE I M R L LYVT PC C + A I+ + Y Sbjct: 77 VDGHCHRAVHAEQNVIAMAARKGIS--LEGATLYVTHFPCDTCLKLLINAGIKEIVY 131 >gi|326918570|ref|XP_003205561.1| PREDICTED: deoxycytidylate deaminase-like [Meleagris gallopavo] Length = 190 Score = 64.5 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 41/119 (34%), Gaps = 31/119 (26%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN------------------ 42 FM+ A AQ + P VGA V NKI+ N Sbjct: 29 EYFMAVAFLSAQRSKD----PSSQVGACIVNSENKIVGIGYNGMPNGCSDDALPWTRTAA 84 Query: 43 RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + K HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 85 HRLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIF 139 >gi|325264269|ref|ZP_08131000.1| putative deoxycytidylate deaminase [Clostridium sp. D5] gi|324030340|gb|EGB91624.1| putative deoxycytidylate deaminase [Clostridium sp. D5] Length = 162 Score = 64.5 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 45/126 (35%), Gaps = 31/126 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRN------------ 44 + FM A+ + P VG V +NKI+S N Sbjct: 9 LSWDEYFMGVAMLSGMRSKD----PNTQVGCCIVSPDNKILSMGYNGFPIGCSDDEFPWA 64 Query: 45 RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 RE D + H+E+ AI + L LYV+L PC CA AI + I+ Sbjct: 65 REGDDPLETKYVYSTHSELNAILN----YNGGSLAGAKLYVSLFPCNECAKAIIQSGIKE 120 Query: 98 LYYGAS 103 + Y Sbjct: 121 VIYDCD 126 >gi|323699085|ref|ZP_08110997.1| CMP/dCMP deaminase, zinc-binding [Desulfovibrio sp. ND132] gi|323459017|gb|EGB14882.1| CMP/dCMP deaminase, zinc-binding [Desulfovibrio desulfuricans ND132] Length = 152 Score = 64.5 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 41/119 (34%), Gaps = 26/119 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN---RELKDVTA--------- 52 FM A AQ + VGA+AV + +I++ N DV Sbjct: 9 EYFMRIAHLVAQRSTCTR-RAVGAIAVRDKRILATGYNGVPTNIAHCDVVGCLRDQLGIP 67 Query: 53 -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE I + L D+Y T +PC +C + ++ +YY Sbjct: 68 SGERHELCRGLHAEQNVIIQAA--TNNLDLKGCDIYCTTKPCILCTKMLINCGVQNIYY 124 >gi|326792204|ref|YP_004310025.1| dCMP deaminase [Clostridium lentocellum DSM 5427] gi|326542968|gb|ADZ84827.1| dCMP deaminase [Clostridium lentocellum DSM 5427] Length = 169 Score = 64.5 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 41/129 (31%), Gaps = 37/129 (28%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL--------NNKIISRAGNRN----- 44 + + FM AL A+ + P VGA V N I+S N Sbjct: 7 ISWDDYFMGIALLAAKRSKD----PSTQVGACIVSGASHDSANENTILSVGYNGLPLGCS 62 Query: 45 ------RELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAIS 91 D HAE+ AI + L +YV L PC C AI Sbjct: 63 DDEFPWERDGDFLDTKYPFVVHAELNAILNA----RGKSLVGARIYVALFPCNECCKAII 118 Query: 92 LARIRRLYY 100 I+ + Y Sbjct: 119 QCGIKEVIY 127 >gi|330934131|ref|XP_003304428.1| hypothetical protein PTT_17018 [Pyrenophora teres f. teres 0-1] gi|311318971|gb|EFQ87490.1| hypothetical protein PTT_17018 [Pyrenophora teres f. teres 0-1] Length = 286 Score = 64.5 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 32/96 (33%), Gaps = 24/96 (25%) Query: 26 VGAVAVLNNKIISRAGN---RNRELKD------------------VTAHAEILAIRMGCR 64 VGAV V + +IIS N R + + HAE A+ R Sbjct: 129 VGAVIVRDRRIISTGYNGTSRRNTNCNQGGCRRCNSGTSGSLSACICLHAEENALLEAGR 188 Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E LY PC CA I+ I + Y Sbjct: 189 ERIGE---GATLYCNTCPCLTCATKITQVGITEVVY 221 >gi|19922544|ref|NP_611345.1| CG10927 [Drosophila melanogaster] gi|7302591|gb|AAF57672.1| CG10927 [Drosophila melanogaster] gi|17862074|gb|AAL39514.1| LD07624p [Drosophila melanogaster] gi|220942946|gb|ACL84016.1| CG10927-PA [synthetic construct] gi|220953166|gb|ACL89126.1| CG10927-PA [synthetic construct] Length = 360 Score = 64.5 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 38/77 (49%), Gaps = 3/77 (3%) Query: 55 EILAIRMG--CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 E+ A++ + D+Y+ EPC MC+ A+ +R +R+++ N + G + Sbjct: 274 EVDAVQGADNLAKFGPYLCTGYDIYLLQEPCLMCSMALVHSRAKRVFF-VKNSENGALAT 332 Query: 113 GTQFYTLATCHHSPEIY 129 Q +++ +H E++ Sbjct: 333 RFQLHSVRELNHHYEVF 349 >gi|315230719|ref|YP_004071155.1| dCMP deaminase [Thermococcus barophilus MP] gi|315183747|gb|ADT83932.1| dCMP deaminase [Thermococcus barophilus MP] Length = 181 Score = 64.5 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 38/117 (32%), Gaps = 24/117 (20%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNR--------------- 43 K FM A + A P VGAVAV + I++ N Sbjct: 21 TKDEYFMLIAKLVSLRATC----PRLRVGAVAVKDGYILATGYNGAPRGMDHCIDVGCLI 76 Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE I M R L LYVT PC C + A I+ + Y Sbjct: 77 VDGHCHRAVHAEQNVIAMAARKGIS--LEGATLYVTHFPCDTCFKLLVNAGIKEIVY 131 >gi|289450291|ref|YP_003474389.1| cytidine and deoxycytidylate deaminase zinc-binding region [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184838|gb|ADC91263.1| cytidine and deoxycytidylate deaminase zinc-binding region [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 165 Score = 64.5 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 43/122 (35%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------R 43 + FM AL AQ + P VGA V NN+IIS N Sbjct: 8 LSWDEYFMGVALLSAQRSKD----PNTQVGACIVSPNNRIISVGYNGLPYGCSDETFPWE 63 Query: 44 NRELKDVT-----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 T HAE+ AI IL +YV L PC C+ AI A + + Sbjct: 64 REGDYLSTKYPYVCHAELNAILN----NPGAILHGARIYVDLFPCNECSKAIIQAGLVEV 119 Query: 99 YY 100 Y Sbjct: 120 IY 121 >gi|329770386|ref|ZP_08261768.1| ComE operon protein 2 [Gemella sanguinis M325] gi|328836509|gb|EGF86169.1| ComE operon protein 2 [Gemella sanguinis M325] Length = 154 Score = 64.5 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 43/116 (37%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRE 46 + FM+ + + + + VGA V + +II+ N + E Sbjct: 4 ISWDEYFMAQSHLLSLRSTCSR-LSVGATIVKDKRIIAGGYNGSIKGDEHCIDVGCKVIE 62 Query: 47 LKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 V T HAEI AI + +YVT PC C +I A I+ + Y Sbjct: 63 GHCVRTIHAEINAILQCSKFGVCT--EGATIYVTHFPCLNCTKSIIQAGIKEICYA 116 >gi|262274059|ref|ZP_06051871.1| deoxycytidylate deaminase [Grimontia hollisae CIP 101886] gi|262221869|gb|EEY73182.1| deoxycytidylate deaminase [Grimontia hollisae CIP 101886] Length = 152 Score = 64.5 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGNR-------------NRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N T HAE AI R L Sbjct: 27 VGAVITKGNRIVSVGFNGYPHGISDSAETDGREMKLLKTLHAEENAILFAKR-----DLL 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 + +++VT PC CAA I I ++ Sbjct: 82 DCEIWVTHFPCPNCAAKIIQTGISQV 107 >gi|12654885|gb|AAH01286.1| DCMP deaminase [Homo sapiens] Length = 178 Score = 64.5 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52 FM+ A AQ + N VGA V NKI+ N D TA Sbjct: 17 EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKL 75 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 76 DTKYPYVCHAELNAIMN----KNLTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127 >gi|298207386|ref|YP_003715565.1| cytidine/deoxycytidylate deaminase family protein [Croceibacter atlanticus HTCC2559] gi|83850022|gb|EAP87890.1| cytidine/deoxycytidylate deaminase family protein [Croceibacter atlanticus HTCC2559] Length = 143 Score = 64.5 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 43/117 (36%), Gaps = 25/117 (21%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-------- 52 +K ++ A E Q + + + VGA+ V + IIS N T Sbjct: 7 LKYDKAYLRIAREWGQLSHCKRKQ-VGALIVKDRMIISDGYNGT-----PTGFENYCEDD 60 Query: 53 ---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI + LY+T+ PC C+ I + I+R+ Y Sbjct: 61 EGYTKWYVLHAEANAILKVAGSTQSCR--DATLYITMSPCKDCSKLIHQSGIKRVVY 115 >gi|268572593|ref|XP_002641361.1| Hypothetical protein CBG13218 [Caenorhabditis briggsae] Length = 294 Score = 64.5 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 5/102 (4%) Query: 27 GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL-PEVDLYVTLEPCTM 85 G ++V N+ ++S HA + + + + L D+++ EPC M Sbjct: 167 GCISVQNDILLSSGS----PSTHPLGHAVMEMVGNLQKRTGSDYLGTGADVFLLNEPCAM 222 Query: 86 CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 C+ A+ RI+RL+Y S+ G ++G Q + + +H E Sbjct: 223 CSMALVHFRIKRLFYVISSRNGVLKDDGWQLHLEPSINHHYE 264 >gi|312792827|ref|YP_004025750.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179967|gb|ADQ40137.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 154 Score = 64.5 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGA+ V + +I++ N +L + HAE AI Sbjct: 27 VGALIVKDKRILATGYNGAPTGLPHCEEVGCLREKLNVPSGQRHELCRGLHAEQNAIIQA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + ++ +Y T PC +CA I A I+++ Y Sbjct: 87 AK--MGVVIDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122 >gi|291515202|emb|CBK64412.1| Deoxycytidylate deaminase [Alistipes shahii WAL 8301] Length = 145 Score = 64.5 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 32/87 (36%), Gaps = 14/87 (16%) Query: 26 VGAVAVLNNKIISRAGNRN-----------RELKDV-TAHAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N HAE AI + + Sbjct: 33 VGALIVKDKMIISDGYNGTPSGFENVCEDDEGHTKPYVLHAEANAITKVAKSANNCD--G 90 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 LY+T PC C+ I A IRR+ Y Sbjct: 91 STLYITAAPCIECSKLIIQAGIRRVVY 117 >gi|326692447|ref|ZP_08229452.1| ComE operon protein 2 [Leuconostoc argentinum KCTC 3773] Length = 160 Score = 64.5 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGN-RNRELKDVTA--------------HAEILAIRMGCRILSQEI 70 VGAV V NN+II+ N T HAE A+ ++ Sbjct: 30 VGAVLVKNNRIIASGYNGAVAGTPHCTDVGDLIVDGHCIRAVHAEQNALMQAAQMGIS-- 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + + +YVT PC C + A + ++ Y Sbjct: 88 VADATVYVTDVPCVHCTKLLLQAGVSKINY 117 >gi|270291422|ref|ZP_06197644.1| ComE operon protein 2 [Pediococcus acidilactici 7_4] gi|270280268|gb|EFA26104.1| ComE operon protein 2 [Pediococcus acidilactici 7_4] Length = 160 Score = 64.5 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 20/116 (17%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV---------- 50 + FM+ AL + + + + VGA+ V + ++I+ N + DV Sbjct: 5 IDWDQYFMTQALLLSLRSTCKR-LSVGAIIVRDRRVIAGGYNGSVS-GDVHCLDEGCYLV 62 Query: 51 ------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ + ++YVT PC C + I ++ Y Sbjct: 63 DGHCVRTIHAEMNAVLQCSKFGVATD--GAEIYVTDFPCLQCTKMLLQTGIVKINY 116 >gi|218290658|ref|ZP_03494749.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius LAA1] gi|218239323|gb|EED06521.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius LAA1] Length = 151 Score = 64.5 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 32/115 (27%), Positives = 45/115 (39%), Gaps = 18/115 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRE 46 M + F S A A + + VG V V + +II+ N + + Sbjct: 8 MDWHSFFASQARVMAARSTCTR-LQVGCVIVRDKRIIASGYNGSIHGDEHCVDVGCKVVD 66 Query: 47 LKDVTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 V A HAE A+ R DLYVT PC C ++ A IRR++Y Sbjct: 67 GHCVRAIHAEQNALLQCARFGIAA--EGADLYVTHTPCLTCTKSLIQAGIRRVFY 119 >gi|308177749|ref|YP_003917155.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Arthrobacter arilaitensis Re117] gi|307745212|emb|CBT76184.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase [Arthrobacter arilaitensis Re117] Length = 346 Score = 64.5 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 55/148 (37%), Gaps = 18/148 (12%) Query: 8 MSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66 + ALE A VG V II+ + HAE+ A+R ++ Sbjct: 11 LRTALETAGRGYRGANPLVGACVLDAEGNIIATGFHLGAGH----PHAEVDALRRLGKMS 66 Query: 67 SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 + E+ + VTLEPC CA AI+ A I +++Y + G + Sbjct: 67 PAKA-RELTMVVTLEPCNHTGRTGPCARAIAEAGIGQVHYAVPDNT--AASGGADYLRSQ 123 Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKER 148 + ++ +R + Q +F + Sbjct: 124 GI-QATQLE---CSDAARNLNQRWFIAK 147 >gi|296117961|ref|ZP_06836544.1| riboflavin biosynthesis protein RibD [Corynebacterium ammoniagenes DSM 20306] gi|295969192|gb|EFG82434.1| riboflavin biosynthesis protein RibD [Corynebacterium ammoniagenes DSM 20306] Length = 355 Score = 64.5 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 39/106 (36%), Gaps = 17/106 (16%) Query: 25 PVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 PVGAV V +I+ + AHAE+ A+ VTLEPC Sbjct: 38 PVGAVMVSTAGEIVGTGATQPAGG----AHAEVQALAEAV-----GRTDGATAVVTLEPC 88 Query: 84 TM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 C A+ A I+ +YY S+P G + A + Sbjct: 89 RHTGRTGPCTQALIEAGIQEVYYLHSDPNPEA-GGGAEALREAGVN 133 >gi|262282453|ref|ZP_06060221.1| comE operon protein 2 family protein [Streptococcus sp. 2_1_36FAA] gi|262261744|gb|EEY80442.1| comE operon protein 2 family protein [Streptococcus sp. 2_1_36FAA] Length = 155 Score = 64.5 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 40/112 (35%), Gaps = 19/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-------------- 49 F + AL A + + VGAV V NK+IS N + + Sbjct: 9 DEYFAAQALLIANRSTCKRAR-VGAVLVKENKVISTGYNGSVSGTEHCIDHECLVVDGHC 67 Query: 50 -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI G + YVT PC C + +R+ Y Sbjct: 68 VRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116 >gi|159107798|ref|XP_001704175.1| Hypothetical protein GL50803_8208 [Giardia lamblia ATCC 50803] gi|157432229|gb|EDO76501.1| Hypothetical protein GL50803_8208 [Giardia lamblia ATCC 50803] Length = 299 Score = 64.5 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 4/85 (4%) Query: 49 DVTAHAEILAIRMGCRILSQEI----LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 D+ H AI + +++ L D++ EPC C+ + AR++R++Y A Sbjct: 207 DMLRHPVYTAIEQAMKQAAEDDKAYLLTGYDVFALEEPCIFCSMCLLHARVKRVFYSAFM 266 Query: 105 PKGGGIENGTQFYTLATCHHSPEIY 129 GG+ +L +H + Sbjct: 267 GHNGGLNESLMVPSLPGVNHRFPVI 291 >gi|229829440|ref|ZP_04455509.1| hypothetical protein GCWU000342_01530 [Shuttleworthia satelles DSM 14600] gi|229791871|gb|EEP27985.1| hypothetical protein GCWU000342_01530 [Shuttleworthia satelles DSM 14600] Length = 191 Score = 64.2 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 45/122 (36%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRN-----------R 45 + FM A A +R++ P VGA V NKI+S N Sbjct: 39 ISWDEYFMGVA----ALAGMRSKDPNTQVGACIVSSQNKILSIGYNGLPIGCSDDEFPWN 94 Query: 46 ELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + T H+E+ AI L +YVTL PC CA AI A I+ + Sbjct: 95 REGNPLENKYFYTTHSELNAILN----YRGGSLEGTKMYVTLFPCNECAKAIIQAGIKEI 150 Query: 99 YY 100 + Sbjct: 151 IF 152 >gi|195119971|ref|XP_002004502.1| GI19969 [Drosophila mojavensis] gi|193909570|gb|EDW08437.1| GI19969 [Drosophila mojavensis] Length = 358 Score = 64.2 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 7/77 (9%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 HA+ L + D+Y+ EPC MC+ A+ +R++R+++ + G + + Sbjct: 285 HADNLC------KYGPYLCTGYDVYLLREPCLMCSMALVHSRVKRIFFLEQSEN-GALTS 337 Query: 113 GTQFYTLATCHHSPEIY 129 Q + + +H E++ Sbjct: 338 KFQLHAVKELNHHYEVF 354 >gi|91202838|emb|CAJ72477.1| similar to dCMP deaminase [Candidatus Kuenenia stuttgartiensis] Length = 158 Score = 64.2 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 26/119 (21%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 F+ E A+ + VGAV VL I++ N +L+ Sbjct: 8 DEYFLRITKEVARRSTCLR-RQVGAVLVLEKHILATGYNGAPSGLQHCLEIGCLREQLRV 66 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 HAE+ A+ R + + LY T PC++CA + A I+R+ Sbjct: 67 PPGERHELCRGLHAEMNALIQAARYGIK--ISGATLYSTTCPCSLCAKMLVNAGIKRIV 123 >gi|254283965|ref|ZP_04958933.1| cytosine deaminase [gamma proteobacterium NOR51-B] gi|219680168|gb|EED36517.1| cytosine deaminase [gamma proteobacterium NOR51-B] Length = 137 Score = 64.2 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 6/79 (7%) Query: 16 QNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73 + P+GAV V +I+ + N + H E AIR I Sbjct: 2 RKRFREGGCPIGAVIVDRVTREIVGKGHNTLVQENYPYNHRETAAIREAGHI----DFSR 57 Query: 74 VDLYVTLEPCTMCAAAISL 92 L TL PC +CA I + Sbjct: 58 CVLVTTLSPCDICARLIIM 76 >gi|258517245|ref|YP_003193467.1| ComE operon protein 2 [Desulfotomaculum acetoxidans DSM 771] gi|257780950|gb|ACV64844.1| ComE operon protein 2 [Desulfotomaculum acetoxidans DSM 771] Length = 154 Score = 64.2 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 42/115 (36%), Gaps = 18/115 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-----RNRELKDVTA--- 52 + FM A A ++ + VG + V + + I+ N L D Sbjct: 4 ISWHEYFMGQAKIIALRSSCSR-LSVGCLIVRDRRSIAGGYNGSVSGDVHCLDDGCRIDN 62 Query: 53 -------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI + + D+YVT PC CA I A IR +YY Sbjct: 63 GHCVRCVHAEANAIVQCAKFGAST--EGTDIYVTHFPCLNCAKLIIQAGIRHVYY 115 >gi|319789749|ref|YP_004151382.1| CMP/dCMP deaminase zinc-binding protein [Thermovibrio ammonificans HB-1] gi|317114251|gb|ADU96741.1| CMP/dCMP deaminase zinc-binding protein [Thermovibrio ammonificans HB-1] Length = 148 Score = 64.2 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 43/128 (33%), Gaps = 32/128 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNREL 47 FMS A A + R VGAV V + +IIS N +L Sbjct: 7 DEYFMSIAQMVATRSTCLRRQ---VGAVLVKDKRIISTGYNGPPSGLKHPEEVGCLREKL 63 Query: 48 KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + HAE AI L LY T PC++C + A I ++ Sbjct: 64 GIPSGERHELCRGLHAEQNAIIQAA--LHGVSTKGSVLYCTHCPCSLCVKMLINAGIEKV 121 Query: 99 YY--GASN 104 Y G + Sbjct: 122 IYKEGYPD 129 >gi|210623304|ref|ZP_03293721.1| hypothetical protein CLOHIR_01671 [Clostridium hiranonis DSM 13275] gi|210153705|gb|EEA84711.1| hypothetical protein CLOHIR_01671 [Clostridium hiranonis DSM 13275] Length = 149 Score = 64.2 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 46/130 (35%) Query: 4 GNVFMSCALEEAQNAALRNEIP----------VGAVAVLNNKIISRAGN----------- 42 FM A E+ VGA+ V + +I++ N Sbjct: 6 DEYFMEIA-----------EVVKKRSTCIRRQVGAIIVKDKQILTTGYNGAPKNLEHCQN 54 Query: 43 ---RNRELKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90 + ++ + HAE AI + + + LYVT PC +CA Sbjct: 55 IGCKREQMHIPSGERHELCRALHAEQNAIIQAA--YNGVSIKDATLYVTTRPCVLCAKMC 112 Query: 91 SLARIRRLYY 100 A I+++ Y Sbjct: 113 INAGIKKIIY 122 >gi|304385135|ref|ZP_07367481.1| ComE operon protein 2 [Pediococcus acidilactici DSM 20284] gi|304329329|gb|EFL96549.1| ComE operon protein 2 [Pediococcus acidilactici DSM 20284] Length = 163 Score = 64.2 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 20/116 (17%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV---------- 50 + FM+ AL + + + + VGA+ V + ++I+ N + DV Sbjct: 8 IDWDQYFMTQALLLSLRSTCKR-LSVGAIIVRDRRVIAGGYNGSVS-GDVHCLDEGCYLV 65 Query: 51 ------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ + ++YVT PC C + I ++ Y Sbjct: 66 DGHCVRTIHAEMNAVLQCSKFGVATD--GAEIYVTDFPCLQCTKMLLQTGIVKINY 119 >gi|220927719|ref|YP_002504628.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulolyticum H10] gi|219998047|gb|ACL74648.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulolyticum H10] Length = 145 Score = 64.2 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 35/98 (35%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 +GAV V +I++ N +L + HAE AI Sbjct: 27 IGAVIVKEKRILASGYNGAPVGCKHCSEVGCLREKLNIPSGQRHELCRAIHAEQNAIVQA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 S + LYVT +PC +CA A I R+ + Sbjct: 87 A--YSGTSVSGATLYVTNQPCVLCAKLAINAGIVRIVF 122 >gi|167520965|ref|XP_001744821.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776435|gb|EDQ90054.1| predicted protein [Monosiga brevicollis MX1] Length = 143 Score = 64.2 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 40/117 (34%), Gaps = 25/117 (21%) Query: 7 FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN----------RNRELKDV----- 50 +MS A+ A+ + N VG + + ++S N + Sbjct: 12 YMSMAMLAAKRSKDPN-TQVGCTIINPDGIVVSMGYNGFPIGCSDQELPWQKHSANPLET 70 Query: 51 ----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 HAE+ AI + E + LY TL PC CA I A I + Y Sbjct: 71 KFPYVCHAEMNAILN----TNDESVRGCTLYATLFPCNECAKMIIQAGIVEVVYLCD 123 >gi|126139263|ref|XP_001386154.1| DRAP deaminase [Scheffersomyces stipitis CBS 6054] gi|126093436|gb|ABN68125.1| DRAP deaminase [Scheffersomyces stipitis CBS 6054] Length = 585 Score = 64.2 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 53/155 (34%), Gaps = 32/155 (20%) Query: 4 GNVFMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM +LE A + + VGAV V K+++ +R HAE A+ Sbjct: 433 HRKFMELSLEMANKCDETQTQYNVGAVLVNRGKVLATGHSRELPGN---THAEQCALEKY 489 Query: 63 CRILSQEILP-EVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPK-------- 106 + +P ++Y T+EPC CA I I+ + G P Sbjct: 490 FEETGKREIPKGTEIYTTMEPCTLRLSGNIPCADRIIGTTIKTCFVGIVEPDTFVKNNSC 549 Query: 107 -GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 ENG ++ + E+ +I Sbjct: 550 SAKFAENGIEYIHIPGY-----------EEECLKI 573 >gi|330999408|ref|ZP_08323122.1| ComE operon protein 2 family protein [Parasutterella excrementihominis YIT 11859] gi|329574834|gb|EGG56393.1| ComE operon protein 2 family protein [Parasutterella excrementihominis YIT 11859] Length = 138 Score = 64.2 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 18/114 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-----------V 50 K ++M+ A AQ + + + VG + V N+ IIS N D V Sbjct: 5 KDNEMYMTIAQIAAQRSYAKR-LKVGCIIVKNHSIISFGWNGMPTGYDNCCEYEVDGKLV 63 Query: 51 TA----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI + +++T PC C+ I I +YY Sbjct: 64 TRPEVQHAELNAI--AKLAQNGYSSNGAKIFITHSPCIHCSLLIQKCGINEVYY 115 >gi|240103131|ref|YP_002959440.1| Deoxycytidylate deaminase (dCMP deaminase) [Thermococcus gammatolerans EJ3] gi|239910685|gb|ACS33576.1| Deoxycytidylate deaminase (dCMP deaminase) [Thermococcus gammatolerans EJ3] Length = 177 Score = 64.2 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 38/117 (32%), Gaps = 24/117 (20%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNR--------------- 43 K FM A + A P VGAVAV + I++ N Sbjct: 21 TKDEYFMLIAKLVSLRATC----PRLRVGAVAVKDGYILATGYNGAPRGMDHCIDVGCLI 76 Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE I M R L LYVT PC C + A I+ + Y Sbjct: 77 VDGHCHRAVHAEQNVIAMAARKGIS--LEGATLYVTHFPCDTCFKLVINAGIKEIVY 131 >gi|303272905|ref|XP_003055814.1| predicted protein [Micromonas pusilla CCMP1545] gi|226463788|gb|EEH61066.1| predicted protein [Micromonas pusilla CCMP1545] Length = 354 Score = 64.2 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 8/88 (9%) Query: 50 VTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108 TA AE+ A I + D+Y EPC MCA A++ +R+RR+ Y + + G Sbjct: 272 PTASLAEMTA-----EIGRGYLCTGYDVYCAREPCVMCAMALTHSRVRRVIYAIPSARHG 326 Query: 109 GIENG-TQFYTLATCHHSPEIYP-GISE 134 + G T +H ++Y G+ Sbjct: 327 ALGGGAYSLQKERTLNHHYDVYTFGVDA 354 >gi|170741291|ref|YP_001769946.1| riboflavin biosynthesis protein RibD [Methylobacterium sp. 4-46] gi|168195565|gb|ACA17512.1| riboflavin biosynthesis protein RibD [Methylobacterium sp. 4-46] Length = 398 Score = 64.2 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 51/148 (34%), Gaps = 25/148 (16%) Query: 4 GNVFMSCALEEAQNAALRN--EIPVGAVAVLN----NKIISRAGNRNRELKDVTAHAEIL 57 +M AL + R VGAV V +I+++ + HAE + Sbjct: 23 DRRYMRLALALGRRHLGRTWPNPSVGAVLVAGPPGAERILAQGVTQPGGR----PHAERV 78 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 A+ + E LYVTLEPC+ CA A+ A + R+ ++P Sbjct: 79 AL-----AEAGEAARGATLYVTLEPCSHHGRTSPCADAVLAAGVARVVSAMNDPDPRVAG 133 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQ 139 G + G + + + Sbjct: 134 RGHGRLRAGG----VAVTVGPCAEEAAR 157 >gi|256378033|ref|YP_003101693.1| riboflavin biosynthesis protein RibD [Actinosynnema mirum DSM 43827] gi|255922336|gb|ACU37847.1| riboflavin biosynthesis protein RibD [Actinosynnema mirum DSM 43827] Length = 341 Score = 64.2 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 54/153 (35%), Gaps = 23/153 (15%) Query: 1 MKKGNVFMSCALEEAQN-AALRNEIP-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57 M + M+ ALE A P VG V + + +++ +R A Sbjct: 1 MLTEHEAMARALELAATPGVPLGPNPRVGCVLLADDGTVVAEGHHRGAGTAHAEA----- 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 + VTLEPC CA A+ A +RR+ + S+P Sbjct: 56 ----DALAEAGAAARGTTAVVTLEPCNHTGRTGPCARALVEAGVRRVVFAQSDPNPVATG 111 Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 GT+ A E+ G+ R+R + + + Sbjct: 112 -GTRTLRDAG----IEVEHGLMADRARALNRAW 139 >gi|323145928|gb|ADX32169.1| hypothetical protein [Pseudomonas phage P3_CHA] gi|323146114|gb|ADX32354.1| hypothetical protein [Pseudomonas phage PAK_P3] Length = 138 Score = 64.2 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 36/116 (31%), Positives = 45/116 (38%), Gaps = 21/116 (18%) Query: 1 MKKG--NVFMSCA--LEEAQNAALRNEIPVGAVAVLNNKIISRAGN-----------RNR 45 MK+ FM CA E VGAV V NKIIS+ N Sbjct: 1 MKQKHKEAFMRCAESFAECSVGVRAK---VGAVIVQGNKIISQGYNGLPSGLEGPLENEE 57 Query: 46 ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE A+ SQE ++ T+ PC CA I A I+R+YY Sbjct: 58 GVTRPEVRHAEKNAL--LWLSCSQESAQGAWMFATMSPCEYCAHDIVDAGIKRVYY 111 >gi|145355155|ref|XP_001421833.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582072|gb|ABP00127.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 125 Score = 64.2 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 44/125 (35%), Gaps = 33/125 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------- 42 + + FMS A AQ + P VGA V +K I+ N Sbjct: 5 LSWDDYFMSVAFLSAQRSKD----PNKQVGACIVGKDKLILGVGYNGFPRGCPDNALPWS 60 Query: 43 RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 + D HAE+ AI + + L+VT+ PC CA + A I Sbjct: 61 KKSANDDPLETKYAYVCHAEMNAIMN----KNSASVAGGSLFVTMYPCNECAKLVIQAGI 116 Query: 96 RRLYY 100 + + Y Sbjct: 117 KEVVY 121 >gi|221639820|ref|YP_002526082.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5- phosphoribosylamino)uracil reductase [Rhodobacter sphaeroides KD131] gi|221160601|gb|ACM01581.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5- phosphoribosylamino)uracil reductase [Rhodobacter sphaeroides KD131] Length = 362 Score = 64.2 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 46/155 (29%), Gaps = 22/155 (14%) Query: 1 MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58 M + M+ AL R VG V V +++ R HAE + Sbjct: 1 MTDADH-MAHALRLGARGLGRTWPNPAVGCVIVKAGRVVGRGWTCPGGR----PHAEPV- 54 Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112 + YVTLEPC CA A+ A + R+ +P Sbjct: 55 ----ALAQAGAAALGATAYVTLEPCSHHGRTPPCAEALIAAGLARVVTATGDPDPRVSGR 110 Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 G A + + E +R F K Sbjct: 111 GHAMLREAG----IAVTERVLEAEARTAHAGFLKR 141 >gi|163793213|ref|ZP_02187189.1| hypothetical protein BAL199_25529 [alpha proteobacterium BAL199] gi|159181859|gb|EDP66371.1| hypothetical protein BAL199_25529 [alpha proteobacterium BAL199] Length = 369 Score = 64.2 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 35/94 (37%), Gaps = 17/94 (18%) Query: 3 KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + +M+ AL A +A PVG V V + +I+ R R HAE +A+ Sbjct: 6 DDDRWMALALRLAHSAVGDTAENPPVGCVLVRDGRIVG----RGRTGSGGRPHAEAVALA 61 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAA 88 +VTLEPC CA Sbjct: 62 QAGNAA-----RGATAFVTLEPCAHHGRTPPCAD 90 >gi|291526381|emb|CBK91968.1| Deoxycytidylate deaminase [Eubacterium rectale DSM 17629] gi|291526826|emb|CBK92412.1| Deoxycytidylate deaminase [Eubacterium rectale M104/1] Length = 161 Score = 64.2 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 46/134 (34%), Gaps = 30/134 (22%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN-------------R 43 + FM A+ + P VGA V +KI+S N Sbjct: 11 ISWDEYFMGIAMLSGMRSKD----PNTQVGACIVDPEHKILSMGYNGFPLGCSDDEFTWA 66 Query: 44 NRELKDV---TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + + H+E+ AI L +YVTL PC CA AI + IR + Y Sbjct: 67 REGEDNKYFYSTHSELNAILN----YRGGSLEGATIYVTLFPCNECAKAIIQSGIREVVY 122 Query: 101 GASNPKGGGIENGT 114 K G + T Sbjct: 123 DC--DKYEGTASVT 134 >gi|332638741|ref|ZP_08417604.1| dCMP deaminase [Weissella cibaria KACC 11862] Length = 161 Score = 64.2 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 39/110 (35%), Gaps = 18/110 (16%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------LKDVTA 52 FM A A + VGAV V + +II+ N + Sbjct: 11 YFMMQAAMLASRSTCTRLH-VGAVVVKDGRIIASGYNGSVTGTPHCTEVGDLLVDGHCIR 69 Query: 53 --HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE A+ ++ ++YVT PC C + A I+++ Y Sbjct: 70 AVHAEQNALMQLAKMGIAA--EGAEIYVTDFPCVHCTKFLLQAGIKKINY 117 >gi|210633850|ref|ZP_03297865.1| hypothetical protein COLSTE_01782 [Collinsella stercoris DSM 13279] gi|210159019|gb|EEA89990.1| hypothetical protein COLSTE_01782 [Collinsella stercoris DSM 13279] Length = 156 Score = 64.2 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 48/145 (33%), Gaps = 31/145 (21%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRNRELKD------V 50 + FM A+ + + P VGA NN+I+S N + Sbjct: 9 ISWDEFFMRAAVAASLRSKD----PNTQVGACIADTNNRILSVGYNGTPSALNDDDFPWG 64 Query: 51 TA------------HAEILAIRMGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRR 97 TA HAE AI + + +YVTL PC CA + A I Sbjct: 65 TADDPLHDKHNYVIHAEANAI---LNYRGSLKDMAGATVYVTLFPCHECAKTLVQAGIGE 121 Query: 98 LYYGASNPKGGGIENGTQFYTLATC 122 + Y + G +N L C Sbjct: 122 VVY-LDDKYCGTEDNLISKNILDRC 145 >gi|302871258|ref|YP_003839894.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor obsidiansis OB47] gi|302574117|gb|ADL41908.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor obsidiansis OB47] Length = 154 Score = 64.2 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGNR--------------NRELKDVTA---------HAEILAIRMG 62 VGA+ V + +I++ N +L + HAE AI Sbjct: 27 VGALIVKDKRILATGYNGAPMGLPHCEEVGCVREKLNIPSGQRHELCRGLHAEQNAIIQA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + ++ +Y T PC +CA I A I+++ Y Sbjct: 87 AK--MGVVIDGSIIYTTTYPCVICAKMIVNAGIKKVIY 122 >gi|262038435|ref|ZP_06011809.1| dCMP deaminase [Leptotrichia goodfellowii F0264] gi|261747530|gb|EEY34995.1| dCMP deaminase [Leptotrichia goodfellowii F0264] Length = 161 Score = 64.2 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 43/122 (35%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRN-----------R 45 + FM A + P VGA + +K II N Sbjct: 8 LSWDEYFMGIAFLSGMRSKD----PSTQVGACIIDEDKKIIGIGYNGFPMGSSDDNMPWN 63 Query: 46 ELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + D HAE+ AI + S + L +YVT PC CA AI + I+++ Sbjct: 64 KEGDFLNTKYPYVVHAELNAI-----LNSIKSLKNAIIYVTHFPCNECAKAIVQSGIKKV 118 Query: 99 YY 100 Y Sbjct: 119 IY 120 >gi|323448590|gb|EGB04487.1| putative deoxycytidine deaminase [Aureococcus anophagefferens] Length = 188 Score = 63.8 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 31/86 (36%), Gaps = 13/86 (15%) Query: 26 VGAVAVLNNKIISRAGNR--NRELK---------DVTAHAEILAIRMGCRILSQEILPEV 74 VG V V + ++++ N T HAE+ A+ R L Sbjct: 81 VGCVIVRDRRVLAMGYNGFFRNAPHTSIVAHGHEQATVHAEVNAVSHAARTGIA--LDGA 138 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYY 100 Y+T PC C + A I+ + Y Sbjct: 139 SAYITHYPCVNCFKTLVSAGIKEVRY 164 >gi|313231032|emb|CBY19030.1| unnamed protein product [Oikopleura dioica] Length = 75 Score = 63.8 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 24/50 (48%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVT 51 + ++ A+ A R E+PVG + V N+ I + N + + K+ T Sbjct: 9 QDDFYWLEKTFAYAEEALDRGEVPVGCLIVYENREIGKGSNNSNKDKNAT 58 >gi|23012876|ref|ZP_00052863.1| COG2131: Deoxycytidylate deaminase [Magnetospirillum magnetotacticum MS-1] Length = 140 Score = 63.8 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 23/118 (19%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN--------RNRELK 48 M + FM A A + P VGAVAV + +I + N + ++ Sbjct: 3 MNWYDYFMGFARHAASKSKD----PSTQVGAVAVGPDGEIRATGYNGLPRGVEDKPERME 58 Query: 49 DV-----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T+HAE + R+ L +YVT PC+ CA ++ A + ++ G Sbjct: 59 RPAKYLWTSHAEENLVAHAARVGVS--LKGCTVYVTHYPCSRCARSLIQAGVAKINVG 114 >gi|82541649|ref|XP_725051.1| cytidine/deoxycytidylate deaminase [Plasmodium yoelii yoelii str. 17XNL] gi|23479911|gb|EAA16616.1| Cytidine and deoxycytidylate deaminase zinc-binding region, putative [Plasmodium yoelii yoelii] Length = 378 Score = 63.8 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 34/59 (57%) Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 Y+T EPC MCA A+ +RI+ + + N + G + + + + L + +H ++Y + E+ Sbjct: 319 YLTHEPCFMCAMAMVHSRIKCVIFDKVNKENGALFSRGKLHCLKSLNHHFKVYKTVREK 377 >gi|147679158|ref|YP_001213373.1| deoxycytidylate deaminase [Pelotomaculum thermopropionicum SI] gi|146275255|dbj|BAF61004.1| deoxycytidylate deaminase [Pelotomaculum thermopropionicum SI] Length = 165 Score = 63.8 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 41/120 (34%), Gaps = 26/120 (21%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 FM A A+ + VGAV V +I++ N + K Sbjct: 22 DEYFMDIAEVVARRSTCLR-RQVGAVIVKERRILASGYNGAPAGLKHCLETGCLREQKKV 80 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE A+ + + YVT +PC +CA + A I+++ + Sbjct: 81 PPGERHELCRGLHAEQNALIQAA--VYGTAIQGAVCYVTHQPCVLCAKILINAGIKKVVF 138 >gi|164688345|ref|ZP_02212373.1| hypothetical protein CLOBAR_01990 [Clostridium bartlettii DSM 16795] gi|164602758|gb|EDQ96223.1| hypothetical protein CLOBAR_01990 [Clostridium bartlettii DSM 16795] Length = 163 Score = 63.8 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 42/122 (34%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRN-----------R 45 + FM +L + P VGA V +N+I+S N Sbjct: 7 ISWDEYFMGISLLSGMRSKD----PSTQVGACIVDSDNRIVSIGYNGFLNGCSDEDFPWE 62 Query: 46 ELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 D HAE AI + L +YV L PC CA I + I+++ Sbjct: 63 REGDFLNTKYPYVVHAEQNAILNA----RGKNLEGCSIYVNLFPCHDCARNIIQSGIKKV 118 Query: 99 YY 100 YY Sbjct: 119 YY 120 >gi|224036452|pdb|2W4L|A Chain A, Human Dcmp Deaminase gi|224036453|pdb|2W4L|B Chain B, Human Dcmp Deaminase gi|224036454|pdb|2W4L|C Chain C, Human Dcmp Deaminase gi|224036455|pdb|2W4L|D Chain D, Human Dcmp Deaminase gi|224036456|pdb|2W4L|E Chain E, Human Dcmp Deaminase gi|224036457|pdb|2W4L|F Chain F, Human Dcmp Deaminase Length = 178 Score = 63.8 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52 FM+ A AQ + N VGA V NKI+ N D TA Sbjct: 14 EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKL 72 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 73 DTKYPYVCHAELNAIMN----KNLTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 124 >gi|302541057|ref|ZP_07293399.1| riboflavin biosynthesis protein RibD [Streptomyces hygroscopicus ATCC 53653] gi|302458675|gb|EFL21768.1| riboflavin biosynthesis protein RibD [Streptomyces himastatinicus ATCC 53653] Length = 362 Score = 63.8 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 39/108 (36%), Gaps = 20/108 (18%) Query: 8 MSCALEEAQNAALR---NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 M A+ A N + VG V + + ++ HAE+ A+R Sbjct: 1 MRRAVALAARGLGHTSPNPV-VGCVILDAEGQPAGEGWHQRAGG----PHAEVHALRAAG 55 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105 E VTLEPC CA A+ A I R+ Y ++P Sbjct: 56 -----ERARGGTALVTLEPCNHTGRTGPCARALLDAGIARVRYAVADP 98 >gi|269114924|ref|YP_003302687.1| Deoxycytidylate deaminase [Mycoplasma hominis] gi|268322549|emb|CAX37284.1| Deoxycytidylate deaminase [Mycoplasma hominis ATCC 23114] Length = 158 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 49/123 (39%), Gaps = 32/123 (26%) Query: 12 LEEAQNAALRNEIP---VGAVAVLNNK-IISRA--------------------GNRNREL 47 + A+ +ALR++ P VGA V + +IS NR Sbjct: 1 MSLAKLSALRSKDPLTKVGACIVSPDNYVISLGYNGMPTSYLNKEVNNDDLFTWNRPTTQ 60 Query: 48 KDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 DV HAE AI I + +I+P LYVT PC CA I ++I ++ Y Sbjct: 61 NDVLNSKYTYVVHAEANAIINA-NITNSKIIPGSILYVTHSPCYHCAKLIVQSKISKVVY 119 Query: 101 GAS 103 + Sbjct: 120 AVA 122 >gi|254578372|ref|XP_002495172.1| ZYRO0B05082p [Zygosaccharomyces rouxii] gi|238938062|emb|CAR26239.1| ZYRO0B05082p [Zygosaccharomyces rouxii] Length = 611 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 24/123 (19%) Query: 1 MKKGNVFMSCALEEAQN------AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA 54 ++ +M ALE+A A VGAV + ++IS +R HA Sbjct: 457 LEPHRKYMKLALEQAAKCGPTTTAFS-----VGAVLINGTEVISTGYSRELPGN---THA 508 Query: 55 EILAIRMGCRILSQEILP-EVDLYVTLEPCT-------MCAAAISLA--RIRRLYYGASN 104 E A+ LP + +Y T+EPC+ C I +I+ ++ G Sbjct: 509 EQCALEKYFSNTGSSELPEDTIIYTTMEPCSFRLSGNDPCVQRIINTNGKIKTVFVGVLE 568 Query: 105 PKG 107 P Sbjct: 569 PDT 571 >gi|119945263|ref|YP_942943.1| CMP/dCMP deaminase, zinc-binding [Psychromonas ingrahamii 37] gi|119863867|gb|ABM03344.1| CMP/dCMP deaminase, zinc-binding [Psychromonas ingrahamii 37] Length = 183 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 5/94 (5%) Query: 26 VGAVAV-LNNKIISRAGNRN--RELKDVTAHAEILAIRMG-CRILSQEILPEVDLYVTLE 81 VGA+ N+ I+ AGN HAE+L I + + + V+LE Sbjct: 44 VGAILFDKNDNILIEAGNEMFLEGFHSA-RHAEMLVIDRFELQYPEYGDRSGLTIMVSLE 102 Query: 82 PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 PC MC + LA I + Y ++ GG E + Sbjct: 103 PCPMCLTRLLLAGIGEIVYLVNDDVGGMAERIDR 136 >gi|257126237|ref|YP_003164351.1| CMP/dCMP deaminase zinc-binding [Leptotrichia buccalis C-1013-b] gi|257050176|gb|ACV39360.1| CMP/dCMP deaminase zinc-binding [Leptotrichia buccalis C-1013-b] Length = 161 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 43/122 (35%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNR-NRELKDVTA--- 52 + FM A + P VGA + +K II N D + Sbjct: 8 LSWDEYFMGIAFLSGMRSKD----PSTQVGACIIDEDKKIIGIGYNGFPMGSSDDSMPWD 63 Query: 53 --------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ AI + S + L +YVT PC CA AI + I+++ Sbjct: 64 KDGEFLDTKYPYVVHAELNAI-----LNSIKSLKNSTIYVTHFPCNECAKAIVQSGIKKV 118 Query: 99 YY 100 Y Sbjct: 119 IY 120 >gi|195584645|ref|XP_002082115.1| GD11395 [Drosophila simulans] gi|194194124|gb|EDX07700.1| GD11395 [Drosophila simulans] Length = 360 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 3/77 (3%) Query: 55 EILAIRMG--CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 E+ A + + D+Y+ EPC MC+ A+ +R +R+++ N G + Sbjct: 274 EVNADQGADNLAKFGPYLCTGYDIYLLQEPCLMCSMALVHSRAKRVFF-VKNSDNGALAT 332 Query: 113 GTQFYTLATCHHSPEIY 129 Q +++ +H E++ Sbjct: 333 RFQLHSVRELNHHYEVF 349 >gi|57642192|ref|YP_184670.1| deoxycytidylate deaminase [Thermococcus kodakarensis KOD1] gi|57160516|dbj|BAD86446.1| deoxycytidylate deaminase [Thermococcus kodakarensis KOD1] Length = 178 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 38/117 (32%), Gaps = 24/117 (20%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNR--------------- 43 K FM A + A P VGAVAV + I++ N Sbjct: 22 TKDEYFMLIAKLVSLRATC----PRLRVGAVAVKDGYILATGYNGAPRGMDHCIDVGCLI 77 Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE I M R L LYVT PC C + A IR + Y Sbjct: 78 VDGHCHRAVHAEQNVIAMAARKGIS--LEGATLYVTHFPCDTCFKLLINAGIREIVY 132 >gi|289615498|emb|CBI57739.1| unnamed protein product [Sordaria macrospora] Length = 363 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 41/122 (33%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---------------RNRE 46 + FM+ A AQ + R VG V V + ++IS N R E Sbjct: 230 DSYFMALASLAAQRSNCMKRR---VGCVVVRDKRVISTGYNGTPRGLINCGEGGCGRCNE 286 Query: 47 LKDV--------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + HAE A+ R +E LY PC C+ I+ I + Sbjct: 287 GQGSGQGLSTCLCMHAEENALLEAGRERVRE---GAVLYCDTCPCLTCSIKIAQVGISEV 343 Query: 99 YY 100 Y Sbjct: 344 VY 345 >gi|238922541|ref|YP_002936054.1| dCMP deaminase [Eubacterium rectale ATCC 33656] gi|238874213|gb|ACR73920.1| dCMP deaminase [Eubacterium rectale ATCC 33656] Length = 161 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 46/134 (34%), Gaps = 30/134 (22%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN-------------R 43 + FM A+ + P VGA V +KI+S N Sbjct: 11 ISWDEYFMGIAMLSGMRSKD----PNTQVGACIVDPEHKILSMGYNGFPLGCSDDEFTWA 66 Query: 44 NRELKDV---TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + + H+E+ AI L +YVTL PC CA AI + IR + Y Sbjct: 67 REGEDNKYFYSTHSELNAILN----YRGGSLEGATIYVTLFPCNECAKAIIQSGIREVVY 122 Query: 101 GASNPKGGGIENGT 114 K G + T Sbjct: 123 DC--DKYEGTASVT 134 >gi|260683514|ref|YP_003214799.1| putative phage-related deoxycytidylate deaminase [Clostridium difficile CD196] gi|260687174|ref|YP_003218308.1| putative phage-related deoxycytidylate deaminase (putative late competence protein) [Clostridium difficile R20291] gi|260209677|emb|CBA63397.1| putative phage-related deoxycytidylate deaminase (putative late competence protein) [Clostridium difficile CD196] gi|260213191|emb|CBE04662.1| putative phage-related deoxycytidylate deaminase (putative late competence protein) [Clostridium difficile R20291] Length = 150 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 19/112 (16%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNR-----------ELKDV-- 50 FM A+ VGA+ V N+I+S N + E++D Sbjct: 18 EYFMRLCETVAERGTCDRAY-VGAIIVNSENRIVSTGYNGSISGDKHCSEVGHEMRDGHC 76 Query: 51 --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE A+ + + + +YVT PC C AI A I+ +YY Sbjct: 77 IRTIHAEQNALYYCAKEGIS--VKDCSIYVTHFPCLNCTKAIIQAGIKHIYY 126 >gi|126730233|ref|ZP_01746044.1| riboflavin biosynthesis protein RibD [Sagittula stellata E-37] gi|126708966|gb|EBA08021.1| riboflavin biosynthesis protein RibD [Sagittula stellata E-37] Length = 89 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 32/95 (33%), Gaps = 17/95 (17%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 FM+ AL + + VG + V +++ R + HAE A+ Sbjct: 4 SDARFMAQALALGRRGMGQTWPNPAVGCLIVRKGRVVGRGWTQP----SGRPHAETQALA 59 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAA 89 M +YVTLEPC C A Sbjct: 60 MAGDAA-----RGATVYVTLEPCAHHGKTPPCTDA 89 >gi|72161281|ref|YP_288938.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Thermobifida fusca YX] gi|71915013|gb|AAZ54915.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Thermobifida fusca YX] Length = 153 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 13/104 (12%) Query: 26 VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 VGA+ V + +++ +R D HAE +A+R L LY +LEPC+ Sbjct: 31 VGALIVAADGTVLADGYSRR---DDPHDHAEEVALRAVAAE--DPRLAAATLYSSLEPCS 85 Query: 85 M-------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 C + I I R+ + P+ G + A Sbjct: 86 TRASRPRSCTSLILDTPIPRIVFAWREPELFVDCRGAELLRAAG 129 >gi|127513983|ref|YP_001095180.1| CMP/dCMP deaminase, zinc-binding [Shewanella loihica PV-4] gi|126639278|gb|ABO24921.1| CMP/dCMP deaminase, zinc-binding [Shewanella loihica PV-4] Length = 149 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV NN+I+S N T HAE AI R L Sbjct: 27 VGAVITENNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILYAKR-----DLS 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I ++ + Sbjct: 82 SCEIWVTHFPCPNCAAKIIQTGLKVV 107 >gi|317495073|ref|ZP_07953445.1| ComE operon protein 2 [Gemella moribillum M424] gi|316914845|gb|EFV36319.1| ComE operon protein 2 [Gemella moribillum M424] Length = 154 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 40/116 (34%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR---------------NR 45 + FM+ + + + + VGA V + +I+S N Sbjct: 4 ISWDEYFMAQSHLLSLRSTCSR-LSVGATIVKDKRIVSGGYNGSIKGDEHCIDVGCKVVE 62 Query: 46 ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAEI AI R +YVT PC C +I A I+ + Y Sbjct: 63 GHCVRTIHAEINAILQCSRFGVGT--EGATIYVTHFPCLNCTKSIIQAGIKEICYA 116 >gi|256391606|ref|YP_003113170.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM 44928] gi|256357832|gb|ACU71329.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM 44928] Length = 164 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 24/117 (20%) Query: 3 KGNVFMSCALEEAQN------AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAE 55 + ++S A++ A A VGA+ V +++ ++R +R+ + HAE Sbjct: 17 EDREWLSTAVDLAWRCPPAPGAFN-----VGALIVDADDRELARGWSRDTDEH---VHAE 68 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNP 105 A+ + L +Y +LEPC C I + IRR+ + P Sbjct: 69 ESALNTLG--PNHPRLSGATVYSSLEPCSIRKSRPLTCTQLIIASGIRRVVFAWREP 123 >gi|164424748|ref|XP_960920.2| hypothetical protein NCU06673 [Neurospora crassa OR74A] gi|157070644|gb|EAA31684.2| hypothetical protein NCU06673 [Neurospora crassa OR74A] Length = 404 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 41/122 (33%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---------------RNRE 46 + FM+ A AQ + R VG V V + ++IS N R E Sbjct: 248 DSYFMALASLAAQRSNCMKRR---VGCVVVRDKRVISTGYNGTPRGLINCGEGGCGRCNE 304 Query: 47 LKDV--------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + HAE A+ R +E LY PC C+ I+ I + Sbjct: 305 GQGSGQGLSTCLCMHAEENALLEAGRERVRE---GAVLYCDTCPCLTCSIKIAQVGISEV 361 Query: 99 YY 100 Y Sbjct: 362 VY 363 >gi|168333891|ref|ZP_02692129.1| CMP/dCMP deaminase, zinc-binding protein [Epulopiscium sp. 'N.t. morphotype B'] Length = 158 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 28/121 (23%) Query: 4 GNVFMSCA-LEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELK 48 FM A L + ++ R + VGAV V + +I+S N +L Sbjct: 6 DQYFMDIAHLVKTRSTCTRRQ--VGAVVVKDKQILSTGYNGAPTSCTHCIELGCMRTKLN 63 Query: 49 DVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 + HAE AI + + + +YVT +PC+MCA + + I ++ Sbjct: 64 IPSGERHELCRALHAEQNAITQAAK--NGTAVAGAVIYVTAQPCSMCAKVLINSGIAKII 121 Query: 100 Y 100 Y Sbjct: 122 Y 122 >gi|219110369|ref|XP_002176936.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411471|gb|EEC51399.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 172 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 31/123 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNR------------N 44 + + FM+ A AQ + P VGA V + +I++ N + Sbjct: 6 ISWDDYFMAMAFLTAQRSKD----PNTQVGACIVDRHQRIVALGYNGFPAGASDDVLPWS 61 Query: 45 RELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 R HAE+ A+ C + + + LYV L PC CA + A ++ Sbjct: 62 RTAVQPLHRKYHYVCHAEVNAVLNKC----SDNVKDTTLYVALFPCNECAKVLVQAGVKE 117 Query: 98 LYY 100 + Y Sbjct: 118 VVY 120 >gi|51246123|ref|YP_066007.1| deoxycytidylate deaminase [Desulfotalea psychrophila LSv54] gi|50877160|emb|CAG37000.1| probable deoxycytidylate deaminase [Desulfotalea psychrophila LSv54] Length = 165 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 42/122 (34%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNR------------- 43 + FM+ A+ AQ + P VGA NKI+ N Sbjct: 7 LSWDEYFMAVAILSAQRSKD----PSTQVGACIANKANKIVGVGYNGFPLGCDDDDLPWG 62 Query: 44 NR----ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 E K HAE+ A+ S L + +YV L PC C I + I+ + Sbjct: 63 REGDFLETKYPYVCHAELNAVLN----SSSRDLMDCKIYVALFPCNECTKVIIQSGIKEV 118 Query: 99 YY 100 Y Sbjct: 119 IY 120 >gi|42524894|ref|NP_970274.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Bdellovibrio bacteriovorus HD100] gi|39577104|emb|CAE78333.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Bdellovibrio bacteriovorus HD100] Length = 394 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 34/163 (20%) Query: 8 MSCALEEAQNAALRNEI---P-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62 MS A+ EA A R + P VGAV + +S + HAE+ A+ Sbjct: 22 MSLAISEAYQGAAR--VSPNPLVGAVVLDAQGGFLSAGHHEFYGG----PHAEVNAL--- 72 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + LS E L +VTLEPC CA ++ ++++ +G +P G + Sbjct: 73 -KNLSPEQLKGAHAFVTLEPCAHEGKTPSCAKMMAKLPLKKVTFGLIDPNPLVAGQGAEI 131 Query: 117 YTLATCHHSPEIYP---GI--------SEQRSRQIIQDFFKER 148 A E++ + E+ + +F K++ Sbjct: 132 LRQARI--EAEVFSSANPVLDAKIKTELEEVCEAFLWNFRKKK 172 >gi|325912230|ref|ZP_08174627.1| putative ComE operon protein 2 [Lactobacillus iners UPII 143-D] gi|325912505|ref|ZP_08174895.1| putative ComE operon protein 2 [Lactobacillus iners UPII 60-B] gi|325475889|gb|EGC79058.1| putative ComE operon protein 2 [Lactobacillus iners UPII 143-D] gi|325478178|gb|EGC81300.1| putative ComE operon protein 2 [Lactobacillus iners UPII 60-B] Length = 157 Score = 63.8 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 18/111 (16%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---LKD------------ 49 FM AL +Q + + VG+V V + ++I+ N + D Sbjct: 10 QYFMMQALVISQRSTCDRAL-VGSVLVKDKRMIATGYNGSVTGEPHCDDEGHLMIDGHCV 68 Query: 50 VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H+E+ A+ + +YVT PC C A+ A I + Y Sbjct: 69 RTIHSEMNALIQCAKNGIST--EGCAIYVTHFPCYNCTKALVQAGIVEVNY 117 >gi|309808484|ref|ZP_07702383.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 01V1-a] gi|308168312|gb|EFO70431.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 01V1-a] Length = 157 Score = 63.8 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 18/111 (16%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---LKD------------ 49 FM AL +Q + + VG+V V + ++I+ N + D Sbjct: 10 QYFMMQALVISQRSTCDRAL-VGSVLVKDKRMIATGYNGSVTGEPHCDDEGHLMVDGHCV 68 Query: 50 VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H+E+ A+ + +YVT PC C A+ A I + Y Sbjct: 69 RTIHSEMNALIQCAKNGIST--EGCAIYVTHFPCYNCTKALVQAGIVEVNY 117 >gi|126699509|ref|YP_001088406.1| putative phage-related deoxycytidylate deaminase (putative late competence protein) [Clostridium difficile 630] gi|254975491|ref|ZP_05271963.1| putative phage-related deoxycytidylate deaminase (putative late competence protein) [Clostridium difficile QCD-66c26] gi|255092879|ref|ZP_05322357.1| putative phage-related deoxycytidylate deaminase (putative late competence protein) [Clostridium difficile CIP 107932] gi|255306890|ref|ZP_05351061.1| putative phage-related deoxycytidylate deaminase (putative late competence protein) [Clostridium difficile ATCC 43255] gi|255314620|ref|ZP_05356203.1| putative phage-related deoxycytidylate deaminase (putative late competence protein) [Clostridium difficile QCD-76w55] gi|255517294|ref|ZP_05384970.1| putative phage-related deoxycytidylate deaminase (putative late competence protein) [Clostridium difficile QCD-97b34] gi|255650401|ref|ZP_05397303.1| putative phage-related deoxycytidylate deaminase (putative late competence protein) [Clostridium difficile QCD-37x79] gi|306520380|ref|ZP_07406727.1| putative phage-related deoxycytidylate deaminase (putative late competence protein) [Clostridium difficile QCD-32g58] gi|115250946|emb|CAJ68774.1| putative dCMP deaminase [Clostridium difficile] Length = 145 Score = 63.8 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 19/112 (16%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNR-----------ELKDV-- 50 FM A+ VGA+ V N+I+S N + E++D Sbjct: 13 EYFMRLCETVAERGTCDRAY-VGAIIVNSENRIVSTGYNGSISGDKHCSEVGHEMRDGHC 71 Query: 51 --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE A+ + + + +YVT PC C AI A I+ +YY Sbjct: 72 IRTIHAEQNALYYCAKEGIS--VKDCSIYVTHFPCLNCTKAIIQAGIKHIYY 121 >gi|116617577|ref|YP_817948.1| deoxycytidylate deaminase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096424|gb|ABJ61575.1| Deoxycytidylate deaminase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 158 Score = 63.8 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRE-------------LKDVTA--HAEILAIRMGCRILSQEI 70 VGA+ V +++II+ N + HAE A+ ++ Sbjct: 30 VGAIIVRDHRIIASGYNGSVSGTPHCTEVGDLMVDGHCIRAVHAEQNALMQAAKMGIT-- 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + ++YVT PC C + A I ++Y+ Sbjct: 88 IDGSEVYVTDVPCVQCTKLLLQAGISKIYF 117 >gi|190407280|gb|EDV10547.1| DRAP deaminase [Saccharomyces cerevisiae RM11-1a] Length = 591 Score = 63.4 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 28/155 (18%) Query: 1 MKKGNVFMSCALEEA------QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA 54 ++ +M A++EA + A VGAV V ++++ +R HA Sbjct: 432 LEPHRRYMEMAVKEADKCGPTKTAFS-----VGAVLVHGTQVLATGYSRQLPGN---THA 483 Query: 55 EILAIRMGCRI---LSQEILPEVDLYVTLEPCT-------MCAAAISLAR--IRRLYYGA 102 E A+ ++ + LY T+EPC+ C I + I ++ G Sbjct: 484 EQCALIKYSQLHPNCPTIVPMGTVLYTTMEPCSFRLSGNEPCCDRILATQGAIGTVFVGV 543 Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 P ++N T L + + PG E+ Sbjct: 544 MEPDT-FVKNNTSLNKLESHGVNYIQIPGY-EEEC 576 >gi|145499399|ref|XP_001435685.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124402819|emb|CAK68288.1| unnamed protein product [Paramecium tetraurelia] Length = 256 Score = 63.4 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 14/114 (12%) Query: 28 AVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-----------EILPEVD 75 + +N I+ A + + H ++A+ E+ Sbjct: 142 CILYDEDNTIVIEA--EDETHINNARHCVMVAMEKLAEHNKNENQQKHFHDLQYYAKEMT 199 Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 L + EPC MCA A+ +RI+ +YY GG+ + Q L +H ++ Sbjct: 200 LVIYFEPCIMCAMALVHSRIKEVYYYQKRVVDGGLNDQLQLNNLKQLNHKYLVF 253 >gi|296450850|ref|ZP_06892600.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP08] gi|296879147|ref|ZP_06903142.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP07] gi|296260321|gb|EFH07166.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP08] gi|296429690|gb|EFH15542.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP07] Length = 150 Score = 63.4 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 19/112 (16%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNR-----------ELKDV-- 50 FM A+ VGA+ V N+I+S N + E++D Sbjct: 18 EYFMRLCETVAERGTCDRAY-VGAIIVNSENRIVSTGYNGSISGDKHCSEVGHEMRDGHC 76 Query: 51 --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE A+ + + + +YVT PC C AI + I+ +YY Sbjct: 77 IRTIHAEQNALYYCAKEGIS--VKDCSIYVTHFPCLNCTKAIIQSGIKHIYY 126 >gi|217076035|gb|ACJ86376.1| 5-amino-6-(5-phosphoribosylamino) uracil reductase [Leuconostoc mesenteroides] Length = 122 Score = 63.4 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 16/125 (12%) Query: 3 KGNVFMSCALEEAQNA--ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M A +EA A E P VGAV V + ++I+ + AHAEI A Sbjct: 2 NDLTWMYLAADEAIRAMPYQTFENPRVGAVLVKDGQVITTPYHEKFGE----AHAEINAF 57 Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA------RIRRLYYGASNPKGGGIENG 113 R+ ++ LYVT EP + S A +R+ G +P G Sbjct: 58 N---RVKNKTEFLGATLYVTFEPNSPQGKVGSWAVQIQNWGQKRVVVGKIDPNPSTNGKG 114 Query: 114 TQFYT 118 + Sbjct: 115 IKMLR 119 >gi|290558972|gb|EFD92355.1| CMP/dCMP deaminase zinc-binding [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 159 Score = 63.4 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 27/97 (27%) Query: 28 AVAVLNNKIISRAG--------------NRNRELKD-----------VTAHAEILAIRMG 62 V V N+I++ + R+ D T HAE AI Sbjct: 30 CVIVKENRILATGYAGSPKGMPHCDDVGHLLRKQYDNETGEITVHCLRTVHAEQNAITQA 89 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 + L + Y+T+EPC CA + I+R+ Sbjct: 90 AKFGVS--LSDSTAYITMEPCFTCAKMLVQVGIKRVV 124 >gi|302529252|ref|ZP_07281594.1| bifunctional enzyme deaminase/reductase [Streptomyces sp. AA4] gi|302438147|gb|EFL09963.1| bifunctional enzyme deaminase/reductase [Streptomyces sp. AA4] Length = 371 Score = 63.4 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 40/112 (35%), Gaps = 25/112 (22%) Query: 8 MSCALEEAQNAALRNEIP------VGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAIR 60 + A++ A +E P VGAV + + +++ + D HAE A+ Sbjct: 230 LRQAIDLA------DECPPSSTFRVGAVVGLPDGTVLATGHS---GEGDPHNHAEESAL- 279 Query: 61 MGCRILSQEILPEVDLYVTLEPCT-------MCAAAISLARIRRLYYGASNP 105 L + +Y +LEPC+ C I I R+ P Sbjct: 280 -AKLDPHDPRLADATMYSSLEPCSDRASHPKSCTQLILETAIPRVVMAWREP 330 >gi|323331668|gb|EGA73082.1| Rib2p [Saccharomyces cerevisiae AWRI796] gi|323335647|gb|EGA76930.1| Rib2p [Saccharomyces cerevisiae Vin13] gi|323346638|gb|EGA80923.1| Rib2p [Saccharomyces cerevisiae Lalvin QA23] gi|323352328|gb|EGA84863.1| Rib2p [Saccharomyces cerevisiae VL3] Length = 591 Score = 63.4 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 28/155 (18%) Query: 1 MKKGNVFMSCALEEA------QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA 54 ++ +M A++EA + A VGAV V ++++ +R HA Sbjct: 432 LEPHRRYMEMAVKEADKCGPTKTAFS-----VGAVLVHGTQVLATGYSRELPGN---THA 483 Query: 55 EILAIRMGCRI---LSQEILPEVDLYVTLEPCT-------MCAAAISLAR--IRRLYYGA 102 E A+ ++ + LY T+EPC+ C I + I ++ G Sbjct: 484 EQCALIKYSQLHPNCPTIVPMGTVLYTTMEPCSFRLSGNEPCCDRILATQGAIGTVFVGV 543 Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 P ++N T L + + PG E+ Sbjct: 544 MEPDT-FVKNNTSLNKLESHGVNYIQIPGY-EEEC 576 >gi|260587372|ref|ZP_05853285.1| putative deoxycytidylate deaminase [Blautia hansenii DSM 20583] gi|331083672|ref|ZP_08332783.1| hypothetical protein HMPREF0992_01707 [Lachnospiraceae bacterium 6_1_63FAA] gi|260542239|gb|EEX22808.1| putative deoxycytidylate deaminase [Blautia hansenii DSM 20583] gi|330403883|gb|EGG83435.1| hypothetical protein HMPREF0992_01707 [Lachnospiraceae bacterium 6_1_63FAA] Length = 161 Score = 63.4 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 48/125 (38%), Gaps = 30/125 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + FM A + + +R++ P VGA V +NKI+S N Sbjct: 9 ISWDEYFMGVA----KLSGMRSKDPNSQVGACIVSQDNKILSMGYNGFPMGCSDDEFPWA 64 Query: 43 RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 R E D H+E+ AI L LYV+L PC CA AI A I+ + Sbjct: 65 REGEELDTKYFYVTHSELNAILN----YRGGSLEGAKLYVSLFPCNECAKAIIQAGIKTI 120 Query: 99 YYGAS 103 Y Sbjct: 121 VYECD 125 >gi|207341390|gb|EDZ69458.1| YOL066Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 589 Score = 63.4 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 28/155 (18%) Query: 1 MKKGNVFMSCALEEA------QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA 54 ++ +M A++EA + A VGAV V ++++ +R HA Sbjct: 432 LEPHRRYMEMAVKEADKCGPTKTAFS-----VGAVLVHGTQVLATGYSRELPGN---THA 483 Query: 55 EILAIRMGCRI---LSQEILPEVDLYVTLEPCT-------MCAAAISLAR--IRRLYYGA 102 E A+ ++ + LY T+EPC+ C I + I ++ G Sbjct: 484 EQCALIKYSQLHPNCPTIVPMGTVLYTTMEPCSFRLSGNEPCCDRILATQGAIGTVFVGV 543 Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 P ++N T L + + PG E+ Sbjct: 544 MEPDT-FVKNNTSLNKLESHGVNYIQIPGY-EEEC 576 >gi|151945568|gb|EDN63809.1| DRAP deaminase [Saccharomyces cerevisiae YJM789] gi|256273956|gb|EEU08875.1| Rib2p [Saccharomyces cerevisiae JAY291] gi|323303146|gb|EGA56948.1| Rib2p [Saccharomyces cerevisiae FostersB] gi|323307078|gb|EGA60361.1| Rib2p [Saccharomyces cerevisiae FostersO] Length = 591 Score = 63.4 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 28/155 (18%) Query: 1 MKKGNVFMSCALEEA------QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA 54 ++ +M A++EA + A VGAV V ++++ +R HA Sbjct: 432 LEPHRRYMEMAVKEADKCGPTKTAFS-----VGAVLVHGTQVLATGYSRELPGN---THA 483 Query: 55 EILAIRMGCRI---LSQEILPEVDLYVTLEPCT-------MCAAAISLAR--IRRLYYGA 102 E A+ ++ + LY T+EPC+ C I + I ++ G Sbjct: 484 EQCALIKYSQLHPNCPTIVPMGTVLYTTMEPCSFRLSGNEPCCDRILATQGAIGTVFVGV 543 Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 P ++N T L + + PG E+ Sbjct: 544 MEPDT-FVKNNTSLNKLESHGVNYIQIPGY-EEEC 576 >gi|6324506|ref|NP_014575.1| Rib2p [Saccharomyces cerevisiae S288c] gi|2501674|sp|Q12362|RIB2_YEAST RecName: Full=Bifunctional protein RIB2; Includes: RecName: Full=tRNA pseudouridine synthase 8, cytoplasmic; AltName: Full=tRNA pseudouridylate synthase 8; AltName: Full=tRNA-uridine isomerase 8; Includes: RecName: Full=Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase gi|642221|emb|CAA79742.1| DRAP deaminase [Saccharomyces cerevisiae] gi|1419887|emb|CAA99076.1| RIB2 [Saccharomyces cerevisiae] gi|285814824|tpg|DAA10717.1| TPA: Rib2p [Saccharomyces cerevisiae S288c] Length = 591 Score = 63.4 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 28/155 (18%) Query: 1 MKKGNVFMSCALEEA------QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA 54 ++ +M A++EA + A VGAV V ++++ +R HA Sbjct: 432 LEPHRRYMEMAVKEAGKCGPTKTAFS-----VGAVLVHGTQVLATGYSRELPGN---THA 483 Query: 55 EILAIRMGCRI---LSQEILPEVDLYVTLEPCT-------MCAAAISLAR--IRRLYYGA 102 E A+ ++ + LY T+EPC+ C I + I ++ G Sbjct: 484 EQCALIKYSQLHPNCPTIVPMGTVLYTTMEPCSFRLSGNEPCCDRILATQGAIGTVFVGV 543 Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 P ++N T L + + PG E+ Sbjct: 544 MEPDT-FVKNNTSLNKLESHGVNYIQIPGY-EEEC 576 >gi|282598641|ref|YP_003358738.1| gp35 [Mycobacterium phage Peaches] gi|255928168|gb|ACU41786.1| gp35 [Mycobacterium phage Peaches] Length = 198 Score = 63.4 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 44/133 (33%), Gaps = 31/133 (23%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-----------RNRELKDV-- 50 F+ A A+ + VGAV V + ++ + N R + Sbjct: 6 DEYFLGIARAAAERSDCERSK-VGAVVVKDRRVRATGYNGAPAGRPGCGTCPRRTSNARP 64 Query: 51 ---------TA----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 T HAE A+ +E L LY+T EPC C+ I A I R Sbjct: 65 GVDSYSSGGTRCVAVHAEANAL----LYCDREDLRGASLYITREPCGDCSKLIDAAGIER 120 Query: 98 LYYGASNPKGGGI 110 + Y K G Sbjct: 121 VVYPFEWEKPEGC 133 >gi|295837583|ref|ZP_06824516.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Streptomyces sp. SPB74] gi|197698333|gb|EDY45266.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Streptomyces sp. SPB74] Length = 160 Score = 63.4 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 2/83 (2%) Query: 22 NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 + P G+V V ++ + A N D T H E R L+ E + + Sbjct: 25 GDEPFGSVLVSGAGEVRAEARNE-AGGGDHTRHPEFALARWAAAHLTPEERARATVCTSG 83 Query: 81 EPCTMCAAAISLARIRRLYYGAS 103 E C MCAAA + R+ + AS Sbjct: 84 EHCPMCAAAHGWTGLGRIVHAAS 106 >gi|255655869|ref|ZP_05401278.1| putative phage-related deoxycytidylate deaminase (putative late competence protein) [Clostridium difficile QCD-23m63] Length = 145 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 19/112 (16%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNR-----------ELKDV-- 50 FM A+ VGA+ V N+I+S N + E++D Sbjct: 13 EYFMRLCETVAERGTCDRAY-VGAIIVNSENRIVSTGYNGSISGDKHCSEVGHEMRDGHC 71 Query: 51 --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE A+ + + + +YVT PC C AI + I+ +YY Sbjct: 72 IRTIHAEQNALYYCAKEGIS--VKDCSIYVTHFPCLNCTKAIIQSGIKHIYY 121 >gi|37651679|ref|NP_932553.1| Cd [Aeromonas phage 44RR2.8t] gi|66392000|ref|YP_238925.1| cd dCMP deaminase [Aeromonas phage 31] gi|34732979|gb|AAQ81516.1| dCMP deaminase [Aeromonas phage 44RR2.8t] gi|62114837|gb|AAX63685.1| cd dCMP deaminase [Aeromonas phage 31] Length = 172 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 36/109 (33%) Query: 26 VGAVAVLNNKIISRAGNRN----RELKDVTA----------------------------- 52 VGA+ + +IIS N E D A Sbjct: 24 VGAIITKDGRIISTGYNGTPAGGHENCDDHAKAAGWLDPETGKLKAMYRQAHNEWSSCNE 83 Query: 53 -HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + ++YVT+ PC CA AI+ + I++++Y Sbjct: 84 IHAELNAILYAAKSGQS--IDGAEMYVTVSPCRECAKAIAQSGIKKVFY 130 >gi|77463964|ref|YP_353468.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Rhodobacter sphaeroides 2.4.1] gi|77388382|gb|ABA79567.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Rhodobacter sphaeroides 2.4.1] Length = 356 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 42/139 (30%), Gaps = 21/139 (15%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL R VG V V +++ R HAE + Sbjct: 1 MAHALRLGARGLGRTWPNPAVGCVIVKAGRVVGRGWTCPGGR----PHAEPV-----ALA 51 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + YVTLEPC CA A+ A + R+ +P G Sbjct: 52 QAGAAALGATAYVTLEPCSHHGRTPPCAEALIAAGLARVVTATGDPDPRVSGRGHAMLRE 111 Query: 120 ATCHHSPEIYPGISEQRSR 138 A + + E +R Sbjct: 112 AG----IAVTERVLEAEAR 126 >gi|159464651|ref|XP_001690555.1| hypothetical protein CHLREDRAFT_144229 [Chlamydomonas reinhardtii] gi|158280055|gb|EDP05814.1| predicted protein [Chlamydomonas reinhardtii] Length = 420 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 33/58 (56%) Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 D+++ EPC MCA + +R++R+ Y S+P+ G + + + + +H+ E++ Sbjct: 344 TGYDIFLVREPCIMCAMGLVHSRVQRVIYCQSDPQHGALGGRQRLHACKSLNHNYEVF 401 >gi|323702624|ref|ZP_08114286.1| CMP/dCMP deaminase zinc-binding protein [Desulfotomaculum nigrificans DSM 574] gi|323532443|gb|EGB22320.1| CMP/dCMP deaminase zinc-binding protein [Desulfotomaculum nigrificans DSM 574] Length = 149 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 30/128 (23%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNREL 47 FM A + R VGAV + + +I++ N ++ Sbjct: 6 DEYFMEITRVVATRSTCLRRK---VGAVIIKDKRILTTGYNGAPAGLAHCLEIGCLREQM 62 Query: 48 KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + HAE A+ + + +YVT +PC +CA I A I+++ Sbjct: 63 GIPSGQRHELCRGLHAEQNALLQAA--VHGIAIQGSTIYVTHQPCVLCAKMIVNAGIKKV 120 Query: 99 YYGASNPK 106 + P Sbjct: 121 VFAGDYPD 128 >gi|89901442|ref|YP_523913.1| riboflavin biosynthesis protein RibD [Rhodoferax ferrireducens T118] gi|89346179|gb|ABD70382.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Rhodoferax ferrireducens T118] Length = 377 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 17/131 (12%) Query: 26 VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 VG V + + + AHAEI+A+R + + YVTLEPC+ Sbjct: 29 VGCVMTDCRENTLGQGHTQRTGG----AHAEIVALRDAKARGNS--VVGATAYVTLEPCS 82 Query: 85 M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP--GISEQR 136 C A+ A I+++ ++P + +G F L E+ P Sbjct: 83 HHGRTGPCCDALIAAGIKKVVASIADPNP--LVSGQGFERLRAAGVEVEVMPADDPLAIA 140 Query: 137 SRQIIQDFFKE 147 SR++ FF Sbjct: 141 SRELNIGFFSR 151 >gi|313157603|gb|EFR57018.1| cytidine and deoxycytidylate deaminase zinc-binding region [Alistipes sp. HGB5] Length = 145 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 32/87 (36%), Gaps = 14/87 (16%) Query: 26 VGAVAVLNNKIISRAGNRN-----------RELKDV-TAHAEILAIRMGCRILSQEILPE 73 VGA+ V + IIS N HAE AI + + Sbjct: 33 VGALIVKDKMIISDGYNGTPSGFENICEDENGHTKPYVLHAEANAITKVAKSANNCD--G 90 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 LY+T PC C+ I A I+R+ Y Sbjct: 91 STLYITAAPCIECSKLIIQAGIKRVVY 117 >gi|148912877|ref|YP_001293456.1| hypothetical protein ORF049 [Pseudomonas phage 73] Length = 155 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 33/107 (30%), Positives = 44/107 (41%), Gaps = 22/107 (20%) Query: 12 LEEAQNAALRNEIP---VGAVAVLNNKIISR-AGN--------------RNRELKDVTAH 53 +E A++ A ++ P +GA V N+ I+ N E V H Sbjct: 19 IELAEHVAGWSKGPRKRIGAAIVRPNRSIASLGYNGPPRGFDDAVFLNMTRDEQHAVVIH 78 Query: 54 AEILAIRMGCRILSQEILPEVDLYVT-LEPCTMCAAAISLARIRRLY 99 AE AIR E L LYV+ L PC +CA I A IRR+ Sbjct: 79 AEDNAIRQAA---PGEDLSACTLYVSPLFPCAICADRIVRAGIRRVV 122 >gi|227551296|ref|ZP_03981345.1| competence protein ComEB [Enterococcus faecium TX1330] gi|257887587|ref|ZP_05667240.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,141,733] gi|257896083|ref|ZP_05675736.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com12] gi|227179576|gb|EEI60548.1| competence protein ComEB [Enterococcus faecium TX1330] gi|257823641|gb|EEV50573.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,141,733] gi|257832648|gb|EEV59069.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com12] Length = 179 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 20/113 (17%) Query: 4 GNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNR---------------NREL 47 FM+ A+ + + R E VGA V +II+ N Sbjct: 28 DQYFMAQAVLLSLRSTCTRLE--VGATLVREKRIIAGGYNGAVSGDVHCIDEGCYIVDGH 85 Query: 48 KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ C L ++YVT PC C A+ A ++ + Y Sbjct: 86 CLRTIHAEMNALLQ-CAKLGIPT-EGSEIYVTHFPCLACTKALLQAGVKGINY 136 >gi|319937282|ref|ZP_08011689.1| deoxycytidylate deaminase [Coprobacillus sp. 29_1] gi|319807648|gb|EFW04241.1| deoxycytidylate deaminase [Coprobacillus sp. 29_1] Length = 154 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 45/129 (34%), Gaps = 34/129 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNR------------N 44 + FM A A + P VGA V +KI+ N Sbjct: 5 ISWDQYFMGVAKLSAYRSKD----PNTQVGACIVTPEHKIVGVGYNGLPWGCEDDEFPWA 60 Query: 45 RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 D+ HAE+ AI + S + L +YV+L PC C AI + I+ Sbjct: 61 NREGDMYDTKYPYVVHAELNAI-----LNSIQKLVGCRIYVSLFPCHECVKAIIQSGIKE 115 Query: 98 LYYGASNPK 106 + Y + K Sbjct: 116 IVY--EDDK 122 >gi|257898719|ref|ZP_05678372.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com15] gi|293571938|ref|ZP_06682952.1| ComE operon protein 2 [Enterococcus faecium E980] gi|257836631|gb|EEV61705.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com15] gi|291607956|gb|EFF37264.1| ComE operon protein 2 [Enterococcus faecium E980] Length = 179 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 20/113 (17%) Query: 4 GNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNR---------------NREL 47 FM+ A+ + + R E VGA V +II+ N Sbjct: 28 DQYFMAQAVLLSLRSTCTRLE--VGATLVREKRIIAGGYNGAVSGDVHCIDEGCYVVDGH 85 Query: 48 KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ C L ++YVT PC C A+ A ++ + Y Sbjct: 86 CLRTIHAEMNALLQ-CAKLGIPT-EGSEIYVTHFPCLACTKALLQAGVKGINY 136 >gi|83311796|ref|YP_422060.1| deoxycytidylate deaminase [Magnetospirillum magneticum AMB-1] gi|82946637|dbj|BAE51501.1| Deoxycytidylate deaminase [Magnetospirillum magneticum AMB-1] Length = 140 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 23/118 (19%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN--------RNRELK 48 M + FM A A + P VGAVAV + +I + N R ++ Sbjct: 3 MAWYDYFMGFAKHAASKSKD----PSTQVGAVAVGPDGEIRATGYNGLPRGVEDRPERME 58 Query: 49 DV-----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T+HAE + R+ L +YVT PC+ CA ++ A + ++ G Sbjct: 59 RPAKYLWTSHAEENLVAHAARVGVS--LKGCTVYVTHYPCSRCARSLIQAGVAEIHVG 114 >gi|303233053|ref|ZP_07319728.1| dCMP deaminase family protein [Atopobium vaginae PB189-T1-4] gi|302480828|gb|EFL43913.1| dCMP deaminase family protein [Atopobium vaginae PB189-T1-4] Length = 161 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 41/123 (33%), Gaps = 30/123 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRN------------ 44 + FM A+ AQ + P VGA N++I+S N Sbjct: 9 ISWDEFFMRVAMIAAQRSKD----PHTQVGACLADTNDRILSVGYNGTPSGINDDEFPWG 64 Query: 45 ------RELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRR 97 + + HAE A+ + + YVTL PC CA + A I Sbjct: 65 TSDDPLYDKHNFVIHAEANAL---LNYRGTLKDMQNATAYVTLFPCQECAKMLVQAGIGE 121 Query: 98 LYY 100 + Y Sbjct: 122 VIY 124 >gi|281357825|ref|ZP_06244311.1| dCMP deaminase [Victivallis vadensis ATCC BAA-548] gi|281315772|gb|EFA99799.1| dCMP deaminase [Victivallis vadensis ATCC BAA-548] Length = 159 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 38/123 (30%), Gaps = 32/123 (26%) Query: 4 GNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRN---------------- 44 FM A A + + V AV V + +IIS N Sbjct: 12 DQYFMDIAHVAATRSNCSRRQ----VAAVLVRDCRIISTGYNGTPRGVRNCSDGGCPRCN 67 Query: 45 -------RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 + V +HAE AI + LY T PC +CA I A I Sbjct: 68 SDAPSGTNLHQCVCSHAEENAIVQAA--YHGIAVKGATLYTTFSPCLLCAKMIINAGIVE 125 Query: 98 LYY 100 + Y Sbjct: 126 VVY 128 >gi|19552809|ref|NP_600811.1| pyrimidine reductase [Corynebacterium glutamicum ATCC 13032] gi|62390479|ref|YP_225881.1| bifunctional riboflavin-specific deaminase/reductase [Corynebacterium glutamicum ATCC 13032] gi|21324366|dbj|BAB98990.1| Pyrimidine reductase, riboflavin biosynthesis [Corynebacterium glutamicum ATCC 13032] gi|41325816|emb|CAF21605.1| PUTATIVE BIFUNCTIONAL RIBOFLAVIN-SPECIFIC DEAMINASE/REDUCTASE [Corynebacterium glutamicum ATCC 13032] Length = 328 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 32/122 (26%) Query: 10 CALEEAQNAAL--RN----EIPVGAVAVL-NNKIISRAGNRNRELKDVTA-----HAEIL 57 AL+ A + + R PVGAV + + +++ TA HAE++ Sbjct: 5 HALDLAHHVSDQVRGTTSPNPPVGAVILDADGEVVGVG---------ATAPPGGPHAEVV 55 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111 A+ VTLEPC C+ A+ A I ++Y ++P Sbjct: 56 ALAAAG-----VRANGGTAVVTLEPCNHYGRTGPCSKALLDAGIAHVFYANADPFPSAAG 110 Query: 112 NG 113 G Sbjct: 111 GG 112 >gi|325180096|emb|CCA14498.1| hypothetical protein SELMODRAFT_438667 [Albugo laibachii Nc14] Length = 313 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 56/135 (41%), Gaps = 30/135 (22%) Query: 28 AVAVLN--NKIISRAGNRNRELKDV---TAHAEILAIRM------GCRI----------- 65 + V +K++ + + R+ K T H ++AI C+ Sbjct: 174 CLVVDAILDKVVCLSSHAVRDEKYAFETTYHPIMIAIDHVALRDRACKHQSAGQCMERNH 233 Query: 66 -------LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFY 117 L+ + D+Y+ +EPC MCA A+ +R+RR+++ N G + +G Sbjct: 234 ELENPPPLTSYLCTSYDVYLDVEPCVMCAMALIHSRVRRVFFHERNHSHGALGGSGIFLQ 293 Query: 118 TLATCHHSPEIYPGI 132 ++ + +H ++ + Sbjct: 294 SIKSLNHHYRVFHAV 308 >gi|195128985|ref|XP_002008939.1| GI13764 [Drosophila mojavensis] gi|193920548|gb|EDW19415.1| GI13764 [Drosophila mojavensis] Length = 189 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 45/121 (37%), Gaps = 32/121 (26%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN----------------- 42 + FM+ A+ ++ + P VGA V N N+I++ N Sbjct: 34 DDYFMATAILSSKRSKD----PSTQVGACVVDNHNRIVAIGYNGFPRNCSDDEFPWSKDE 89 Query: 43 RNRELKDV---TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 +K+ HAE AI + L LY TL PC C I + IR +Y Sbjct: 90 DKNSMKNKYMYVVHAEANAILN----SNCTALDGTRLYTTLFPCNECTKLIIQSGIREIY 145 Query: 100 Y 100 Y Sbjct: 146 Y 146 >gi|260221154|emb|CBA29435.1| Riboflavin biosynthesis protein ribD [Curvibacter putative symbiont of Hydra magnipapillata] Length = 363 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 44/128 (34%), Gaps = 16/128 (12%) Query: 28 AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM-- 85 V + + + HAE++A+R + YVTLEPC+ Sbjct: 16 CVVFKDEYCLGLGHTQKAGG----PHAEVMALRDAAEKGLS--VVGATAYVTLEPCSHHG 69 Query: 86 ----CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP--GISEQRSRQ 139 C A+ A I+++ +P NG F L E+ P SR+ Sbjct: 70 RTGPCCDALIQAGIKKVVATNLDPNPLVAGNG--FAKLRAAGVEVEVLPSEHPLAIESRE 127 Query: 140 IIQDFFKE 147 + FF Sbjct: 128 LNIGFFSR 135 >gi|195378584|ref|XP_002048063.1| GJ13755 [Drosophila virilis] gi|194155221|gb|EDW70405.1| GJ13755 [Drosophila virilis] Length = 193 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 45/120 (37%), Gaps = 31/120 (25%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNR------------NREL 47 + FM+ AL ++ + P VGA V + +I++ N +++ Sbjct: 34 DDYFMATALLSSRRSKD----PSTQVGACIVDKHKRIVAIGYNGFPRDCSDDVFSWSKDN 89 Query: 48 KDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D HAE AI + L LY TL PC C I + IR +YY Sbjct: 90 SDPLENKNMYVVHAEANAILN----SNSRSLDGTRLYTTLFPCNECTKLIIQSGIREIYY 145 >gi|256003264|ref|ZP_05428256.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum DSM 2360] gi|255992955|gb|EEU03045.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum DSM 2360] Length = 174 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 27/99 (27%) Query: 26 VGAVAVLNNKIISRAGN------------------------RNRELKDVTAHAEILAIRM 61 VGA+ V + +I++ N + EL HAE AI Sbjct: 48 VGALIVKDKRILATGYNGAPMGCKHCSEIGCLREKLNVPSGQRHELCRAI-HAEQNAIVQ 106 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 S + LYVT +PC +CA A I+++ + Sbjct: 107 AA--YSGTSVNGGTLYVTTQPCILCAKMAINAGIKKIVF 143 >gi|57530125|ref|NP_001006444.1| deoxycytidylate deaminase [Gallus gallus] gi|53133480|emb|CAG32069.1| hypothetical protein RCJMB04_17c11 [Gallus gallus] Length = 190 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 42/119 (35%), Gaps = 31/119 (26%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN------------------ 42 FM+ A AQ + P VGA V NKI+ N Sbjct: 29 EYFMAVAFLSAQRSKD----PSSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWTRAAA 84 Query: 43 RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + + K HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 85 HSLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIF 139 >gi|258510212|ref|YP_003183646.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257476938|gb|ACV57257.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 151 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 32/115 (27%), Positives = 45/115 (39%), Gaps = 18/115 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRE 46 M + F S A A + + VG V V + +II+ N + + Sbjct: 8 MDWHSFFASQARVMAARSTCTR-LQVGCVVVRDKRIIASGYNGSIHGDEHCVDVGCKVVD 66 Query: 47 LKDVTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 V A HAE A+ R DLYVT PC C ++ A IRR++Y Sbjct: 67 GHCVRAIHAEQNALLQCARFGIAA--EGADLYVTHTPCLTCTKSLIQAGIRRVFY 119 >gi|67608724|ref|XP_666899.1| dCMP deaminase; Dcd1p [Cryptosporidium hominis TU502] gi|54657972|gb|EAL36670.1| dCMP deaminase; Dcd1p [Cryptosporidium hominis] Length = 373 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 37/129 (28%), Gaps = 45/129 (34%) Query: 4 GNVFMSCALEEA--------QNAALRNEIPVGAVAVLNNKIISRAGN------------- 42 FM A + A + VG+V V KIIS N Sbjct: 225 DEYFMKIA-KLASQRSNCVSRK--------VGSVIVKEKKIISTGYNGTPKNMKNCFEGG 275 Query: 43 -------RNRELKD----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAIS 91 E K HAE A+ + +YVTL PC C I Sbjct: 276 CTRCANPNRVEGKSLETCSCMHAETNALLFA----GIDKCIGATIYVTLMPCISCTKNII 331 Query: 92 LARIRRLYY 100 I R+ + Sbjct: 332 QCEIERVVF 340 >gi|254780348|ref|YP_003064761.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine [Candidatus Liberibacter asiaticus str. psy62] gi|254040025|gb|ACT56821.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine [Candidatus Liberibacter asiaticus str. psy62] Length = 364 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 33/101 (32%), Gaps = 17/101 (16%) Query: 4 GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 FMS AL ++ V + V + +I R HAE+ A+ Sbjct: 7 DARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRG----VTAYGGCPHAEVQALEE 62 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIR 96 E YVTLEPC CA I IR Sbjct: 63 AG-----EEARGATAYVTLEPCSHYGRSPPCAQFIIECGIR 98 >gi|195379983|ref|XP_002048750.1| GJ21218 [Drosophila virilis] gi|194143547|gb|EDW59943.1| GJ21218 [Drosophila virilis] Length = 358 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + D+Y+ EPC MCA A+ +R++R+++ + G + Q +++ +H Sbjct: 291 KYGPYLCTGYDVYLLREPCLMCAMALVHSRVKRIFFLEQSDD-GALATSFQLHSVKELNH 349 Query: 125 SPEIY 129 E++ Sbjct: 350 HYEVF 354 >gi|144575095|gb|AAZ43808.2| deoxycytidylate deaminase fusion protein [Mycoplasma synoviae 53] Length = 168 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 31/128 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-------------- 42 + + FM A+ +ALR++ P VGA V N II N Sbjct: 11 ISWDDYFMG----LAKLSALRSKDPSTQVGACIVNRQNHIIGMGYNGMPNGEDELFPWES 66 Query: 43 RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + + KD HAE+ AI +L +Y +L PC+ CA I ++I+ L Sbjct: 67 NSSDEKDNKYPYVMHAEVNAILNTSVMLQN---SNATIYTSLFPCSNCAKIIVQSQIKEL 123 Query: 99 YYGASNPK 106 Y + K Sbjct: 124 VY--EDDK 129 >gi|148555358|ref|YP_001262940.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Sphingomonas wittichii RW1] gi|148500548|gb|ABQ68802.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Sphingomonas wittichii RW1] Length = 313 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 42/130 (32%), Gaps = 21/130 (16%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 VG V V + ++I R H I + L LYVTLEPC Sbjct: 21 VGCVIVRDGRVIGRGW--TGAGGRP--H------AEAIAIEAAGDLAGATLYVTLEPCAH 70 Query: 84 -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 CA I A+ R+ +P G T A + G+ + +R Sbjct: 71 VSARGPACADLIVAAKPARVVIALRDPDPRTDGRGIARITAAG----IAVATGVEAEAAR 126 Query: 139 QIIQDFFKER 148 + F R Sbjct: 127 ASMAGFLTRR 136 >gi|71894411|ref|YP_278519.1| deoxycytidylate deaminase fusion protein [Mycoplasma synoviae 53] Length = 169 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 31/128 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-------------- 42 + + FM A+ +ALR++ P VGA V N II N Sbjct: 12 ISWDDYFMG----LAKLSALRSKDPSTQVGACIVNRQNHIIGMGYNGMPNGEDELFPWES 67 Query: 43 RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + + KD HAE+ AI +L +Y +L PC+ CA I ++I+ L Sbjct: 68 NSSDEKDNKYPYVMHAEVNAILNTSVMLQN---SNATIYTSLFPCSNCAKIIVQSQIKEL 124 Query: 99 YYGASNPK 106 Y + K Sbjct: 125 VY--EDDK 130 >gi|67467781|ref|XP_649973.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS] gi|56466510|gb|EAL44587.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS] Length = 288 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 1/86 (1%) Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 + HA A++ + + DL+ T EPC MC A+ +R R+++ Sbjct: 199 TIKSNHPLLHAPFNALQSIPLNHKKYLCTGFDLFTTHEPCLMCGMALLHSRFGRVFFIHQ 258 Query: 104 NPKGGGIENGTQFYTLATCHHSPEIY 129 + G +H +Y Sbjct: 259 HKTNGAF-TIHHLNKKKQLNHHFNVY 283 >gi|154302467|ref|XP_001551643.1| hypothetical protein BC1G_09810 [Botryotinia fuckeliana B05.10] gi|150855299|gb|EDN30491.1| hypothetical protein BC1G_09810 [Botryotinia fuckeliana B05.10] Length = 357 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 37/122 (30%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---------------RNRE 46 FM A AQ + R VG V V ++IS N R E Sbjct: 202 DQYFMQLASLAAQRSNCMKRR---VGCVLVREKRVISTGYNGTPRGLLNCGEGGCSRCNE 258 Query: 47 LKDV--------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + HAE A+ R +E LY PC C+ I I + Sbjct: 259 GQGSGVGLGTCLCLHAEENALLEAGRERVREN---AILYCDTCPCLTCSIKIVQVGISEV 315 Query: 99 YY 100 Y Sbjct: 316 VY 317 >gi|118350811|ref|XP_001008684.1| Cytidine and deoxycytidylate deaminase zinc-binding region family protein [Tetrahymena thermophila] gi|89290451|gb|EAR88439.1| Cytidine and deoxycytidylate deaminase zinc-binding region family protein [Tetrahymena thermophila SB210] Length = 337 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 3/70 (4%) Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK---GGGIENGTQFYTLATCHHS 125 +D+++ EPC MC+ A+ +R+RR+YY NPK GG+ + + +HS Sbjct: 251 YYCTGLDIFIVQEPCIMCSMALIHSRVRRVYYSLKNPKQEQFGGLNEDLMINHMDSLNHS 310 Query: 126 PEIYPGISEQ 135 ++ + + Sbjct: 311 FLVFQNVESE 320 >gi|260892001|ref|YP_003238098.1| CMP/dCMP deaminase zinc-binding protein [Ammonifex degensii KC4] gi|260864142|gb|ACX51248.1| CMP/dCMP deaminase zinc-binding protein [Ammonifex degensii KC4] Length = 162 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 33/98 (33%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGA +N+I++ N E + HAE A+ Sbjct: 27 VGACLTRDNRILATGYNGAPSGLKHCLEIGCLREEKGIPSGERHELCRGLHAEQNALLQA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + LY T PC +CA + ARI R+ Y Sbjct: 87 AVYGVS--IAGATLYTTHFPCALCAKMLIQARIERVVY 122 >gi|195335637|ref|XP_002034470.1| GM21898 [Drosophila sechellia] gi|194126440|gb|EDW48483.1| GM21898 [Drosophila sechellia] Length = 360 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + D+Y+ EPC MC+ A+ +R +R+++ N G + Q +++ + Sbjct: 285 AKFGPYLCTGYDIYLLQEPCLMCSMALVHSRAKRVFF-VKNSDNGALATRFQLHSVRELN 343 Query: 124 HSPEIY 129 H E++ Sbjct: 344 HHYEVF 349 >gi|111219910|ref|YP_710704.1| cytidine and deoxycytidylate deaminase zinc-binding region [Frankia alni ACN14a] gi|111147442|emb|CAJ59092.1| Cytidine and deoxycytidylate deaminase zinc-binding region [Frankia alni ACN14a] Length = 213 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 31/95 (32%), Gaps = 7/95 (7%) Query: 8 MSCALEEAQNAALRN-EIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A P AV +I + N HAE++A+ Sbjct: 46 MDLVHRLAARNHREGCGGPFAAVVANPDTGQIHAAGVNLVLATGLSAMHAEVVALSFAQA 105 Query: 65 ILSQEILPE----VDLYVTLEPCTMCAAAISLARI 95 L + L V+L V PC MC A+ + + Sbjct: 106 RLGRWDLSAVGSPVELVVNWRPCVMCYGAVMWSGV 140 >gi|150864324|ref|XP_001383092.2| tRNA-specific adenosine-34 deaminase subunit [Scheffersomyces stipitis CBS 6054] gi|149385580|gb|ABN65063.2| tRNA-specific adenosine-34 deaminase subunit [Scheffersomyces stipitis CBS 6054] Length = 325 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 14/104 (13%) Query: 46 ELKDVTAHAEILAIRMGC--------------RILSQEILPEVDLYVTLEPCTMCAAAIS 91 D H+ + I + S + + ++ + EPC MC A+ Sbjct: 204 SHNDPFQHSIMQGIEQVSLEEQKKRKDLSTSKQDRSNYLCQNMTVFSSHEPCVMCCMALV 263 Query: 92 LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 +RI RL Y S+P GG+E Q + EI+ I + Sbjct: 264 HSRISRLIYLRSSPSSGGLETNYQLGDREGLNWKFEIWKWIDRK 307 >gi|332558836|ref|ZP_08413158.1| riboflavin biosynthesis protein RibD [Rhodobacter sphaeroides WS8N] gi|332276548|gb|EGJ21863.1| riboflavin biosynthesis protein RibD [Rhodobacter sphaeroides WS8N] Length = 356 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 42/139 (30%), Gaps = 21/139 (15%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL R VG V V +++ R R HAE + Sbjct: 1 MAHALRLGARGLGRTWPNPAVGCVIVKAGRVVGRGWTRPGGR----PHAEPV-----ALA 51 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + YVTLEPC CA A+ + R+ +P G Sbjct: 52 QAGAAALGATAYVTLEPCSHHGRTPPCAEALIAVGLARVVTATGDPDPRVSGRGHAMLRE 111 Query: 120 ATCHHSPEIYPGISEQRSR 138 A + + E +R Sbjct: 112 AG----IAVTERVLEAEAR 126 >gi|169335784|ref|ZP_02862977.1| hypothetical protein ANASTE_02209 [Anaerofustis stercorihominis DSM 17244] gi|169258522|gb|EDS72488.1| hypothetical protein ANASTE_02209 [Anaerofustis stercorihominis DSM 17244] Length = 154 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 27/99 (27%) Query: 26 VGAVAVLNNKIISRAGN------------------------RNRELKDVTAHAEILAIRM 61 VGA+ V ++KIIS N EL T HAE AI Sbjct: 32 VGAIIVKDHKIISTGYNGAPKGLAHCTKDTCVRLKYNIKSGERHELCRAT-HAEQNAIIS 90 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + + D+Y+T PC +C+ + A I+R+ Y Sbjct: 91 AATMGVS--VEGADIYITDSPCILCSKMLINAGIKRIIY 127 >gi|194212324|ref|XP_001917931.1| PREDICTED: similar to Deoxycytidylate deaminase (dCMP deaminase) [Equus caballus] Length = 178 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 40/116 (34%), Gaps = 25/116 (21%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52 FM+ A AQ + N V A V NKI+ N D TA Sbjct: 17 EYFMAVAFLSAQRSKDPNSQ-VAACIVNAENKIVGIGYNGMPNGCSDDLLPWRRTAENKL 75 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI + + +YV L PC CA I I+ + + Sbjct: 76 DTKYPYVCHAELNAIMN----KNSADVKGCTMYVALFPCNECAKLIIQTGIKEVIF 127 >gi|291548233|emb|CBL21341.1| Deoxycytidylate deaminase [Ruminococcus sp. SR1/5] Length = 164 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 42/125 (33%), Gaps = 30/125 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRN-----------R 45 + FM A+ + P VGA V +NKI+S N Sbjct: 12 LSWDEYFMGVAMLSGMRSKD----PHSQVGACIVSEDNKILSMGYNGFPKGCSDDEFPWG 67 Query: 46 ELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 D H+E+ AI L LYV+L PC CA AI A IR + Sbjct: 68 REGDPLDTKYLYVTHSELNAILN----YRGGSLEGAKLYVSLFPCNECAKAIIQAGIRTI 123 Query: 99 YYGAS 103 Y Sbjct: 124 VYDCD 128 >gi|256832227|ref|YP_003160954.1| CMP/dCMP deaminase zinc-binding [Jonesia denitrificans DSM 20603] gi|256685758|gb|ACV08651.1| CMP/dCMP deaminase zinc-binding [Jonesia denitrificans DSM 20603] Length = 283 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 15/121 (12%) Query: 9 SCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68 A+EEA ++ VGAV +++ ++ K HAE +A+ + Sbjct: 14 KKAIEEALKSSDNAR--VGAVIARGETVLATGY-KSEIDK---LHAEQIALHKA--EMQG 65 Query: 69 EILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 + LY T+EPC CA ++ A I ++ G +P G + Sbjct: 66 VDVKGATLYTTMEPCANSRTSRVPCAELVAEAGIVEVHIGEYDPNPQVYRLGWKHLRDRG 125 Query: 122 C 122 Sbjct: 126 I 126 >gi|295674403|ref|XP_002797747.1| deoxycytidylate deaminase [Paracoccidioides brasiliensis Pb01] gi|226280397|gb|EEH35963.1| deoxycytidylate deaminase [Paracoccidioides brasiliensis Pb01] Length = 350 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 37/122 (30%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50 FM A AQ + R VG V V ++IS N R K+ Sbjct: 186 DQYFMQLASLAAQRSNCMKRR---VGCVIVREKRVISTGYNGTPRNTKNCNEGGCPRCNC 242 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE A+ R E LY PC C+ I+ I + Sbjct: 243 GEGGGAALSTCLCIHAEENALLEAGRERIGE---AAILYCNTCPCLTCSVKIAQLGISEV 299 Query: 99 YY 100 Y Sbjct: 300 VY 301 >gi|218778060|ref|YP_002429378.1| dCMP deaminase [Desulfatibacillum alkenivorans AK-01] gi|218759444|gb|ACL01910.1| dCMP deaminase [Desulfatibacillum alkenivorans AK-01] Length = 166 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 38/119 (31%), Gaps = 30/119 (25%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN--------------RNR 45 FM A AQ + P VGA V KI+ N R Sbjct: 12 DEYFMGVACLSAQRSKD----PNTQVGACVVNRKKKIVGIGYNGFPTGCSDDELPWAREG 67 Query: 46 ELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D HAE+ AI L LYV L PC CA I + I+ + Y Sbjct: 68 GALDTKYAYVCHAELNAILN----SIVSDLEGCTLYVALFPCNECAKIIIQSGIKEIVY 122 >gi|148973883|ref|ZP_01811416.1| putative deoxycytidylate deaminase [Vibrionales bacterium SWAT-3] gi|145965580|gb|EDK30828.1| putative deoxycytidylate deaminase [Vibrionales bacterium SWAT-3] Length = 147 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV +N+I+S N T HAE AI R L Sbjct: 27 VGAVITKHNRIVSVGFNGYPHGVSDSADTDDREMKYLKTLHAEENAILFAKR-----DLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I I + Sbjct: 82 SCEIWVTHFPCPNCAAKIIQTGISAV 107 >gi|182415443|ref|YP_001820509.1| CMP/dCMP deaminase zinc-binding [Opitutus terrae PB90-1] gi|177842657|gb|ACB76909.1| CMP/dCMP deaminase zinc-binding [Opitutus terrae PB90-1] Length = 150 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 18/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV----LNNKIISRAGN-------RNRELKD--- 49 FM+ A+ + + VG V V N+I++ N L+D Sbjct: 18 DEYFMATAVLLSTRSNCERLH-VGCVVVTGGDRKNRIVAAGYNGFLPGAAHTSRLRDGRE 76 Query: 50 -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE AI R S + YVT PC C ++ A I + Y Sbjct: 77 QATVHAEQNAIADAARRGSS--VEGCVAYVTHYPCINCIKILAAAGIAEVRY 126 >gi|255954833|ref|XP_002568169.1| Pc21g11370 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589880|emb|CAP96034.1| Pc21g11370 [Penicillium chrysogenum Wisconsin 54-1255] Length = 331 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 39/122 (31%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50 FM A AQ + R VG V V +++IS N R L++ Sbjct: 192 DQYFMQLASLAAQRSNCMKRR---VGCVLVRESRVISTGYNGTPRHLQNCNQGGCPRCNR 248 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE A+ R +E LY PC C I+ I + Sbjct: 249 GDGGGAGLSTCLCLHAEENALLEAGRERIRE---GAILYCDTCPCLTCTVKIAQVGISEV 305 Query: 99 YY 100 Y Sbjct: 306 VY 307 >gi|212224519|ref|YP_002307755.1| deoxycytidylate deaminase [Thermococcus onnurineus NA1] gi|212009476|gb|ACJ16858.1| deoxycytidylate deaminase [Thermococcus onnurineus NA1] Length = 181 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 38/117 (32%), Gaps = 24/117 (20%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNR--------------- 43 K FM A + A P VGAVAV + I++ N Sbjct: 23 TKDEYFMLIAKLVSLRATC----PRLRVGAVAVKDGYILATGYNGAPRGMEHCIDVGCLI 78 Query: 44 NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE I M R L LYVT PC C + A I+ + Y Sbjct: 79 VDGHCHRAVHAEQNVIAMAARKGIS--LEGATLYVTHFPCDTCFKLVINAGIKEIVY 133 >gi|311992960|ref|YP_004009827.1| Cd dCMP deaminase [Acinetobacter phage Acj61] gi|295815249|gb|ADG36175.1| Cd dCMP deaminase [Acinetobacter phage Acj61] Length = 184 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 46/139 (33%), Gaps = 51/139 (36%) Query: 7 FMSCAL---EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK--------------- 48 FM A +E++ + + VGAV N +IIS N RE Sbjct: 6 FMQIAYLVSQESKCVSWK----VGAVIAKNGRIISTGYNGTREGGVNCCDHAHEQGWTEQ 61 Query: 49 --DVTA-------------------------HAEILAIRMGCRILSQEILPEVDLYVTLE 81 + HAE+ AI + + +YVTL Sbjct: 62 RYNPVPPHVNQVVLKNEFREVHSAWSSAHEIHAELNAILFAAKNGLP--IDGATMYVTLS 119 Query: 82 PCTMCAAAISLARIRRLYY 100 PC CA +I I++L Y Sbjct: 120 PCRECAKSILQTGIKKLVY 138 >gi|313888782|ref|ZP_07822443.1| putative ComE operon protein 2 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845151|gb|EFR32551.1| putative ComE operon protein 2 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 139 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 40/118 (33%), Gaps = 21/118 (17%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKD-------- 49 M+K FM A + VG V V +N+IIS N + Sbjct: 1 MRKSWDEYFMEITEMVATRSTCDRAF-VGCVLVNSDNRIISTGYNGSVTGNPHCDEVGHT 59 Query: 50 -------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ + YVT PC C A+ A IR + Y Sbjct: 60 MRDGHCIATIHAEMNALLYCAKEGISVR--GAKAYVTHFPCLNCTKALIQAGIREIIY 115 >gi|221502412|gb|EEE28139.1| cytidine and deoxycytidylate deaminase zinc-binding region, putative [Toxoplasma gondii VEG] Length = 692 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 +Y + EPC +CA A+ +RI+ L++ N GGI G + + +H Sbjct: 616 GNYYCQGCVVYCSHEPCVLCAMALIHSRIKLLFFVHDNKVHGGITRG-RLHLDRRLNHGY 674 Query: 127 EI 128 + Sbjct: 675 RV 676 >gi|221482209|gb|EEE20570.1| cytidine and deoxycytidylate deaminase zinc-binding region domain-containing protein, putative [Toxoplasma gondii GT1] Length = 692 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 +Y + EPC +CA A+ +RI+ L++ N GGI G + + +H Sbjct: 616 GNYYCQGCVVYCSHEPCVLCAMALIHSRIKLLFFVHDNKVHGGITRG-RLHLDRRLNHGY 674 Query: 127 EI 128 + Sbjct: 675 RV 676 >gi|297559747|ref|YP_003678721.1| CMP/dCMP deaminase zinc-binding protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844195|gb|ADH66215.1| CMP/dCMP deaminase zinc-binding protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 156 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 15/119 (12%) Query: 26 VGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83 VG V + ++ +R D HAE A+R L LY +LEPC Sbjct: 36 VGCAVVAADGTVLGEGYSRR---DDPHDHAEEAALREVDA--DDPRLAGATLYSSLEPCS 90 Query: 84 -----TMCAAAISLAR-IRRLYYGASNPKGGGIENGTQFYTLA--TCHHSPEIYPGISE 134 + +A+ LA + R+ + P +G + A T P++ G+ E Sbjct: 91 SRASRPLSCSALILATPVARVVFAWREPSVFVDCDGAERLRAAGRTVVERPDLADGVRE 149 >gi|229815226|ref|ZP_04445562.1| hypothetical protein COLINT_02272 [Collinsella intestinalis DSM 13280] gi|229809236|gb|EEP45002.1| hypothetical protein COLINT_02272 [Collinsella intestinalis DSM 13280] Length = 156 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 42/123 (34%), Gaps = 30/123 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRNRELKD------V 50 + FM A+ + + P VGA NN+I+S N + Sbjct: 9 ISWDEFFMRAAVAASLRSKD----PNTQVGACIADTNNRILSVGYNGTPSALNDDDFPWG 64 Query: 51 TA------------HAEILAIRMGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRR 97 TA HAE AI + + +YVTL PC CA + A + Sbjct: 65 TADDPLHDKHNYVIHAEANAI---LNYRGSLKDMAGATVYVTLFPCHECAKTLVQAGVGE 121 Query: 98 LYY 100 + Y Sbjct: 122 VVY 124 >gi|237845333|ref|XP_002371964.1| hypothetical protein TGME49_000420 [Toxoplasma gondii ME49] gi|211969628|gb|EEB04824.1| hypothetical protein TGME49_000420 [Toxoplasma gondii ME49] Length = 180 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 40/115 (34%), Gaps = 29/115 (25%) Query: 26 VGAVAVLNNKIISRAGNRNREL------------KDVT------------AHAEILAIRM 61 VGA+ N++I+ N D + HAE A+ Sbjct: 45 VGAIVARGNRVIATGYNGTPSQAANCNAGGCARCNDPSVSQGRALEACECIHAEANALLE 104 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG-ASNPKGGGIENGTQ 115 R + LYVT PC CA + + IR + Y + K G ++ T+ Sbjct: 105 AGR----DRAMNGTLYVTCLPCLGCAKLVVQSAIRTVVYAEEYDDKSGALDLLTR 155 >gi|154505649|ref|ZP_02042387.1| hypothetical protein RUMGNA_03188 [Ruminococcus gnavus ATCC 29149] gi|153794088|gb|EDN76508.1| hypothetical protein RUMGNA_03188 [Ruminococcus gnavus ATCC 29149] Length = 162 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 45/123 (36%), Gaps = 31/123 (25%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRN------------REL 47 FM A+ + P VG V +NKI+S N RE Sbjct: 12 DEYFMGVAMLSGMRSKD----PNTQVGCCIVSQDNKILSMGYNGFPKGCSDDEFPWAREG 67 Query: 48 KDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++ + H+E+ AI S L LYV+L PC CA AI + I+ + Y Sbjct: 68 ENPLETKYVYSTHSELNAILN----YSGGSLAGAKLYVSLFPCNECAKAIIQSGIKEVIY 123 Query: 101 GAS 103 Sbjct: 124 DCD 126 >gi|116492911|ref|YP_804646.1| deoxycytidylate deaminase [Pediococcus pentosaceus ATCC 25745] gi|116103061|gb|ABJ68204.1| Deoxycytidylate deaminase [Pediococcus pentosaceus ATCC 25745] Length = 160 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 41/115 (35%), Gaps = 18/115 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------RNR 45 + FM+ A + + + VGAV V + ++I+ N Sbjct: 5 IDWDQYFMTQATLLSLRSTCTR-LSVGAVIVRDRRVIAGGYNGSVSGDVHCIDEGCYLVE 63 Query: 46 ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ + ++YVT PC C + + I ++ Y Sbjct: 64 GHCVRTIHAEMNAVLQCAKFGVATD--GAEVYVTDFPCLQCTKMLLQSGIIKINY 116 >gi|325679150|ref|ZP_08158742.1| cytidine and deoxycytidylate deaminase zinc-binding region [Ruminococcus albus 8] gi|324109155|gb|EGC03379.1| cytidine and deoxycytidylate deaminase zinc-binding region [Ruminococcus albus 8] Length = 159 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 49/125 (39%), Gaps = 31/125 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGNR----NRELKDV-- 50 + + F+ A + +A R++ P VGA V NKI+S N + + Sbjct: 8 ISWDDYFLGIA----ELSAARSKDPNTQVGACIVSEENKILSVGYNGMPAGCNDDEMPWG 63 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ AI + S L +YV+L PC CA AI + I+ + Sbjct: 64 REGDFLDTKYPFVCHAELNAI-----LNSNHDLKGSRIYVSLFPCNECAKAIIQSGIKEV 118 Query: 99 YYGAS 103 Y Sbjct: 119 IYTCD 123 >gi|299143279|ref|ZP_07036359.1| cytidine/deoxycytidylate deaminase family protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517764|gb|EFI41503.1| cytidine/deoxycytidylate deaminase family protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 143 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 18/91 (19%) Query: 26 VGAVAV-LNNKIISRAGNRN---RELKD------------VTAHAEILAIRMGCRILSQE 69 VG V V +++I+S N + D T HAE+ A+ + C Sbjct: 27 VGCVIVNKDHRIVSTGYNGSLAGNPQCDEIGHTMRDGHCIATIHAEMNAL-LYCAKEGIP 85 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + + YVT PC C ++ A I+ +YY Sbjct: 86 V-KDCVAYVTHFPCLNCTKSLIQAGIKAIYY 115 >gi|240274201|gb|EER37719.1| deoxycytidylate deaminase [Ajellomyces capsulatus H143] Length = 385 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 37/122 (30%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50 FM A AQ + R VG V V +++S N R K+ Sbjct: 216 DQYFMQLASLAAQRSNCMKRR---VGCVLVRGRRVMSTGYNGTPRNTKNCNEGGCPRCNC 272 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE A+ R E LY PC C+ I+ I + Sbjct: 273 GEGGGAALSTCLCIHAEENALLEAGRERIGE---GATLYCNTCPCLTCSVKIAQLGISEV 329 Query: 99 YY 100 Y Sbjct: 330 VY 331 >gi|28950120|emb|CAD70900.1| probable dCMP deaminase [Neurospora crassa] Length = 420 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 41/122 (33%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---------------RNRE 46 + FM+ A AQ + R VG V V + ++IS N R E Sbjct: 239 DSYFMALASLAAQRSNCMKRR---VGCVVVRDKRVISTGYNGTPRGLINCGEGGCGRCNE 295 Query: 47 LKDV--------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + HAE A+ R +E LY PC C+ I+ I + Sbjct: 296 GQGSGQGLSTCLCMHAEENALLEAGRERVRE---GAVLYCDTCPCLTCSIKIAQVGISEV 352 Query: 99 YY 100 Y Sbjct: 353 VY 354 >gi|224122016|ref|XP_002318729.1| predicted protein [Populus trichocarpa] gi|222859402|gb|EEE96949.1| predicted protein [Populus trichocarpa] Length = 225 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 45/128 (35%), Gaps = 39/128 (30%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-------------- 42 + + FM+ AL A+ + P VGA V N I+ N Sbjct: 67 LSWDDYFMAIALLSAERSKD----PNRQVGACLVSKNGIILGIGYNGFPRGCSDDDLPWA 122 Query: 43 RNRELKDVT-------AHAEILAI---RMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 + + D HAE+ AI + + LYVT+ PC CA I L Sbjct: 123 KKSKSGDPLETKYPYVCHAEVNAILNTNHASAVGQR-------LYVTMFPCNECAKIIIL 175 Query: 93 ARIRRLYY 100 + + + Y Sbjct: 176 SGVSEVIY 183 >gi|9630421|ref|NP_046853.1| gp36.1 [Mycobacterium phage D29] gi|6014935|sp|O22000|DCTD_BPMD2 RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP deaminase gi|3172285|gb|AAC18478.1| putative deoxycytidinylate deaminase [Mycobacterium phage D29] Length = 128 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 41/123 (33%), Gaps = 31/123 (25%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------------RNRE---- 46 F+ A AQ + VGAV V + ++ N R Sbjct: 7 DEYFLGIATAAAQRSDCERSK-VGAVVVKDRRVRGTGYNGAPAGAAGCSTCPRRLSGAVP 65 Query: 47 -----LKDVTA----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 T HAE A+ +E L LYVT EPC C+ I+ + I R Sbjct: 66 GVSDYSSGATRCVAVHAEANAL----LYCDREDLIGATLYVTREPCYACSNLIAASGIER 121 Query: 98 LYY 100 + Y Sbjct: 122 VVY 124 >gi|195027988|ref|XP_001986864.1| GH20299 [Drosophila grimshawi] gi|193902864|gb|EDW01731.1| GH20299 [Drosophila grimshawi] Length = 356 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + D+Y+ EPC MCA A+ +R+RR+++ + + G + + Q + + + Sbjct: 287 AKYGPYLCTGYDVYLLREPCLMCAMALVHSRVRRIFFLELS-RNGALASTFQLHAVKELN 345 Query: 124 HSPEIY 129 H E++ Sbjct: 346 HHYEVF 351 >gi|329767199|ref|ZP_08258726.1| ComE operon protein 2 [Gemella haemolysans M341] gi|328836866|gb|EGF86513.1| ComE operon protein 2 [Gemella haemolysans M341] Length = 153 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 40/116 (34%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR---------------NR 45 + FM+ + + + + VGA V + +I+S N Sbjct: 4 ISWDEYFMAQSHLLSLRSTCSR-LSVGATIVKDKRIVSGGYNGSIKGDEHCIDVGCKVVE 62 Query: 46 ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAEI AI + +YVT PC C +I A I+ + Y Sbjct: 63 GHCVRTIHAEINAILQCSKFGVGT--EGATIYVTHFPCLNCTKSIIQAGIKEICYA 116 >gi|241889824|ref|ZP_04777122.1| ComE operon protein 2 [Gemella haemolysans ATCC 10379] gi|241863446|gb|EER67830.1| ComE operon protein 2 [Gemella haemolysans ATCC 10379] Length = 153 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 40/116 (34%), Gaps = 18/116 (15%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR---------------NR 45 + FM+ + + + + VGA V + +I+S N Sbjct: 4 ISWDEYFMAQSHLLSLRSTCSR-LSVGATIVKDKRIVSGGYNGSIKGDEHCIDVGCKVVE 62 Query: 46 ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T HAEI AI + +YVT PC C +I A I+ + Y Sbjct: 63 GHCVRTIHAEINAILQCSKFGVGT--EGATIYVTHFPCLNCTKSIIQAGIKEICYA 116 >gi|328957258|ref|YP_004374644.1| enzyme associated to DNA transport (competence) [Carnobacterium sp. 17-4] gi|328673582|gb|AEB29628.1| enzyme associated to DNA transport (competence) [Carnobacterium sp. 17-4] Length = 172 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 19/91 (20%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDV----------------TAHAEILAIRMGCRILSQE 69 VGA V +II+ N + D T HAE+ AI + +Q Sbjct: 31 VGATIVREKRIIAGGYNGSVS-GDAHCIDDGCYIVDGHCLRTIHAEMNAILQCAKFGAQT 89 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++YVT PC C I A I ++ Y Sbjct: 90 --EGAEIYVTHFPCLQCTKMIIQAGITKINY 118 >gi|125975082|ref|YP_001038992.1| CMP/dCMP deaminase, zinc-binding [Clostridium thermocellum ATCC 27405] gi|281418500|ref|ZP_06249519.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum JW20] gi|125715307|gb|ABN53799.1| CMP/dCMP deaminase, zinc-binding protein [Clostridium thermocellum ATCC 27405] gi|281407584|gb|EFB37843.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum JW20] gi|316939247|gb|ADU73281.1| CMP/dCMP deaminase zinc-binding protein [Clostridium thermocellum DSM 1313] Length = 153 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 27/99 (27%) Query: 26 VGAVAVLNNKIISRAGN------------------------RNRELKDVTAHAEILAIRM 61 VGA+ V + +I++ N + EL HAE AI Sbjct: 27 VGALIVKDKRILATGYNGAPMGCKHCSEIGCLREKLNVPSGQRHELCRAI-HAEQNAIVQ 85 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 S + LYVT +PC +CA A I+++ + Sbjct: 86 AA--YSGTSVNGGTLYVTTQPCILCAKMAINAGIKKIVF 122 >gi|300172852|ref|YP_003772017.1| ComE operon protein 2 [Leuconostoc gasicomitatum LMG 18811] gi|299887230|emb|CBL91198.1| ComE operon protein 2 [Leuconostoc gasicomitatum LMG 18811] Length = 160 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRE-------------LKDVTA--HAEILAIRMGCRILSQEI 70 VGAV V NN+IIS N + HAE A+ ++ Sbjct: 30 VGAVIVQNNRIISSGYNGSVSGTPHCTDVGDLIVDGHCIRAVHAEQNALMQAAQMGIS-- 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + ++YVT PC C + A I+++ + Sbjct: 88 VDGAEVYVTDVPCVHCTKLLLQAGIQKINF 117 >gi|54302697|ref|YP_132690.1| putative deoxycytidylate deaminase [Photobacterium profundum SS9] gi|90414645|ref|ZP_01222617.1| putative deoxycytidylate deaminase [Photobacterium profundum 3TCK] gi|46916121|emb|CAG22890.1| putative deoxycytidylate deaminase [Photobacterium profundum SS9] gi|90324278|gb|EAS40850.1| putative deoxycytidylate deaminase [Photobacterium profundum 3TCK] Length = 149 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN---------RNRELKDV----TAHAEILAIRMGCRILSQEILP 72 VGAV +N+I+S N N + +D+ T HAE AI R L Sbjct: 27 VGAVITEHNRIVSVGFNGYPHGISDSANTDDRDMKLLKTLHAEENAILFAKR-----DLS 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I I + Sbjct: 82 GCEIWVTHFPCPNCAAKIIQTGISMV 107 >gi|317142986|ref|XP_001819233.2| deoxycytidylate deaminase [Aspergillus oryzae RIB40] Length = 351 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 35/122 (28%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50 FM A AQ + R VG V V ++IS N E Sbjct: 194 DQYFMQLASLAAQRSNCMKRR---VGCVLVRECRVISTGYNGTPRHLRNCNEAGCPRCNR 250 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE A+ R +E LY PC C I+ I + Sbjct: 251 GEGGGVGLSTCLCLHAEENALLEAGRERIRE---GTILYCDTCPCLTCTVKIAQVGISEV 307 Query: 99 YY 100 Y Sbjct: 308 VY 309 >gi|302858549|gb|ADL71295.1| gp35 [Mycobacterium phage Eagle] Length = 158 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 40/121 (33%), Gaps = 30/121 (24%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------------RNRELKDV 50 F+ A A+ + VGAV V + ++ N R R D Sbjct: 6 DEYFLGIARAVAERSDCERSK-VGAVVVKDRRVRGTGYNGAPAGRPGCGSCPRRRSSVDP 64 Query: 51 TA------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + HAE A+ +E L LY+T EPC C I A + R+ Sbjct: 65 GSGYDSGPGRCVAVHAEANAL----LHCDREDLVGATLYITREPCNGCLKLIEAAGVARV 120 Query: 99 Y 99 Sbjct: 121 V 121 >gi|29366796|ref|NP_813736.1| gp20 [Streptomyces phage phiBT1] gi|29243116|emb|CAD80144.1| gp20 [Streptomyces phage phiBT1] Length = 116 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 34/102 (33%), Gaps = 32/102 (31%) Query: 26 VGAVAV-LNNKIISRAGN-------------------------RNRELK-DVTA-HAEIL 57 VGAV V NN++ N + TA HAE Sbjct: 12 VGAVLVNANNEVRGTGYNGAPSGVPGCASAGACPRGRLSAVECAPNSDYANCTADHAERN 71 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 AIR LP LY T EPC C I A IRR+ Sbjct: 72 AIRHAPAA----ELPGSTLYTTREPCPACWTLIRAAGIRRVV 109 >gi|297627300|ref|YP_003689063.1| riboflavin-specific deaminase (diaminohydroxyphosphoribosylaminopyrimidine deaminase) (5-amino-6-(5-phosphoribosylamino)uracil reductase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296923065|emb|CBL57649.1| Riboflavin-specific deaminase (diaminohydroxyphosphoribosylaminopyrimidine deaminase) (5-amino-6-(5-phosphoribosylamino)uracil reductase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 406 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 19/148 (12%) Query: 8 MSCALEEAQNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 + A E + + P VG V + + +I+ +R A + Sbjct: 67 LRRAFELSARGPADDPNPRVGCVLLAPDGGVIAEGWHRGAGTAHAEA------AALAAAR 120 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + V+LEPC CA A++ A I R+ + +P GTQ Sbjct: 121 AVGSDVRGATAVVSLEPCAHWGRTGPCAVALADAGITRVVFSVPDPNPVAAG-GTQVLRE 179 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 E+ G++E R+ + D+ Sbjct: 180 RG----VEVIGGVAEASGREALGDWLAR 203 >gi|225557684|gb|EEH05969.1| deoxycytidylate deaminase [Ajellomyces capsulatus G186AR] Length = 356 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 37/122 (30%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50 FM A AQ + R VG V V +++S N R K+ Sbjct: 187 DQYFMQLASLAAQRSNCMKRR---VGCVLVRGRRVMSTGYNGTPRNTKNCNEGGCPRCNC 243 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE A+ R E LY PC C+ I+ I + Sbjct: 244 GEGGGAALSTCLCIHAEENALLEAGRERIGE---GATLYCNTCPCLTCSVKIAQLGISEV 300 Query: 99 YY 100 Y Sbjct: 301 VY 302 >gi|325095421|gb|EGC48731.1| deoxycytidylate deaminase [Ajellomyces capsulatus H88] Length = 356 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 37/122 (30%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50 FM A AQ + R VG V V +++S N R K+ Sbjct: 187 DQYFMQLASLAAQRSNCMKRR---VGCVLVRGRRVMSTGYNGTPRNTKNCNEGGCPRCNC 243 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE A+ R E LY PC C+ I+ I + Sbjct: 244 GEGGGAALSTCLCIHAEENALLEAGRERIGE---GATLYCNTCPCLTCSVKIAQLGISEV 300 Query: 99 YY 100 Y Sbjct: 301 VY 302 >gi|195487415|ref|XP_002091899.1| GE11982 [Drosophila yakuba] gi|194178000|gb|EDW91611.1| GE11982 [Drosophila yakuba] Length = 360 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + D+Y+ EPC MC+ A+ +R +R+++ N G + Q +++ + Sbjct: 285 AKFGPYLCTGYDVYLLQEPCLMCSMALVHSRAKRVFF-VKNSDNGALATRFQLHSVRELN 343 Query: 124 HSPEIY 129 H E++ Sbjct: 344 HHYEVF 349 >gi|194881131|ref|XP_001974702.1| GG21908 [Drosophila erecta] gi|190657889|gb|EDV55102.1| GG21908 [Drosophila erecta] Length = 360 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + D+Y+ EPC MC+ A+ +R +R+++ N G + Q +++ + Sbjct: 285 AKFGPYLCTGYDVYLLQEPCLMCSMALVHSRAKRVFF-VKNSDNGALATRFQLHSVRELN 343 Query: 124 HSPEIY 129 H E++ Sbjct: 344 HHYEVF 349 >gi|126701100|ref|YP_001089997.1| putative cytidine and deoxycytidylate deaminase [Clostridium difficile 630] gi|254977101|ref|ZP_05273573.1| putative cytidine and deoxycytidylate deaminase [Clostridium difficile QCD-66c26] gi|255094429|ref|ZP_05323907.1| putative cytidine and deoxycytidylate deaminase [Clostridium difficile CIP 107932] gi|255102686|ref|ZP_05331663.1| putative cytidine and deoxycytidylate deaminase [Clostridium difficile QCD-63q42] gi|255308507|ref|ZP_05352678.1| putative cytidine and deoxycytidylate deaminase [Clostridium difficile ATCC 43255] gi|255316181|ref|ZP_05357764.1| putative cytidine and deoxycytidylate deaminase [Clostridium difficile QCD-76w55] gi|255518842|ref|ZP_05386518.1| putative cytidine and deoxycytidylate deaminase [Clostridium difficile QCD-97b34] gi|255652021|ref|ZP_05398923.1| putative cytidine and deoxycytidylate deaminase [Clostridium difficile QCD-37x79] gi|255657431|ref|ZP_05402840.1| putative cytidine and deoxycytidylate deaminase [Clostridium difficile QCD-23m63] gi|260684996|ref|YP_003216281.1| putative cytidine and deoxycytidylate deaminase [Clostridium difficile CD196] gi|260688654|ref|YP_003219788.1| putative cytidine and deoxycytidylate deaminase [Clostridium difficile R20291] gi|296449027|ref|ZP_06890817.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP08] gi|296879850|ref|ZP_06903823.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP07] gi|306521763|ref|ZP_07408110.1| putative cytidine and deoxycytidylate deaminase [Clostridium difficile QCD-32g58] gi|115252537|emb|CAJ70380.1| putative dCMP deaminase [Clostridium difficile] gi|260211159|emb|CBA66608.1| putative cytidine and deoxycytidylate deaminase [Clostridium difficile CD196] gi|260214671|emb|CBE07302.1| putative cytidine and deoxycytidylate deaminase [Clostridium difficile R20291] gi|296262120|gb|EFH08925.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP08] gi|296429139|gb|EFH15013.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP07] Length = 145 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 41/120 (34%), Gaps = 26/120 (21%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 FM A + + VGAV V + +I++ N + +EL Sbjct: 6 DEYFMEIAEVVKKRSTCIR-RQVGAVIVRDKQILTTGYNGSPRNLEHCENIGCKRQELNI 64 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE AI + LYVT PC +CA A I ++ Y Sbjct: 65 PSGERHELCRALHAEQNAIIQAAHNGIS--VDGATLYVTTRPCVLCAKMCINAGILKIVY 122 >gi|221480648|gb|EEE19095.1| deoxycytidylate deaminase, putative [Toxoplasma gondii GT1] gi|221501404|gb|EEE27182.1| deoxycytidylate deaminase, putative [Toxoplasma gondii VEG] Length = 180 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 38/111 (34%), Gaps = 29/111 (26%) Query: 26 VGAVAVLNNKIISRAGNRNREL------------KDVT------------AHAEILAIRM 61 VGA+ N++I+ N D + HAE A+ Sbjct: 45 VGAIVARGNRVIATGYNGTPSQAANCNAGGCARCNDPSVSQGRALEACECIHAEANALLE 104 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG-ASNPKGGGIE 111 R + LYVT PC CA + + IR + Y + K G ++ Sbjct: 105 AGR----DRAMNGTLYVTCLPCLGCAKLVVQSAIRTVVYAEEYDDKSGALD 151 >gi|162447679|ref|YP_001620811.1| deoxycytidylate deaminase [Acholeplasma laidlawii PG-8A] gi|161985786|gb|ABX81435.1| deoxycytidylate deaminase [Acholeplasma laidlawii PG-8A] Length = 158 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 31/129 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------R 43 + FM A + +ALR++ P VGA + ++ I++ N + Sbjct: 7 ISWDQYFMGVA----KLSALRSKDPNTQVGACIINPDRRIVAIGYNGLPMGLSDDEDFWQ 62 Query: 44 NRELKDVTA-----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 E + HAE AI L + LYVTL PC C + A ++ + Sbjct: 63 KNEDYSKSKYAYVVHAEANAILNA-----TTSLKDATLYVTLFPCNECMKLLVQAGVKEI 117 Query: 99 YYGASNPKG 107 Y + KG Sbjct: 118 VYMSDKDKG 126 >gi|302907570|ref|XP_003049675.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256730611|gb|EEU43962.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 433 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 55/169 (32%), Gaps = 55/169 (32%) Query: 2 KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNN----KIISRAGNRNR--------ELK 48 + +V+M+ A A A +GAV V + +++ AG+ R Sbjct: 223 EDASVWMALAHRVALQAKEAGIGEAMGAVIVQRDAGKVELVGLAGDARRHQECGLLDGTS 282 Query: 49 DVTAHAEILAI------------RMGCRILSQEILP------------------------ 72 + H + AI R + L Sbjct: 283 NPMTHCVVRAISMVAQKLVRHERRAAGLPVQTPNLEYDAFQDGPLLEIEKQCFEQEHPNK 342 Query: 73 ------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 ++LYVT EPC C+ I +R+ ++ + P+ GG+ + + Sbjct: 343 DGYLCHGLELYVTHEPCVSCSMGILHSRMGKVVFATHMPRSGGLSSDDR 391 >gi|115450331|ref|NP_001048766.1| Os03g0117200 [Oryza sativa Japonica Group] gi|108705865|gb|ABF93660.1| riboflavin biosynthesis protein RibD containing protein, expressed [Oryza sativa Japonica Group] gi|113547237|dbj|BAF10680.1| Os03g0117200 [Oryza sativa Japonica Group] gi|215687333|dbj|BAG91867.1| unnamed protein product [Oryza sativa Japonica Group] Length = 423 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 22/150 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M +E A+ AA P VG V V + +++ + K HAE+ A+R Sbjct: 78 DGHYMRRCVELARKAAGHTSPNPMVGCVVVRDGRVVGEGFH----PKAGQPHAEVFALRD 133 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YV+LEPC C A+ A+++ + G ++P G + Sbjct: 134 AGDLAEN-----ATAYVSLEPCNHYGRTPPCTEALINAKVKDVVVGMTDPNPIVASKGIE 188 Query: 116 FYTLATCHHSPEIYPGISEQR-SRQIIQDF 144 A ++ + E+ R++ + + Sbjct: 189 RLRSAG----IDVRLCVDEEASCRKLNEAY 214 >gi|84385224|ref|ZP_00988256.1| putative deoxycytidylate deaminase [Vibrio splendidus 12B01] gi|86145748|ref|ZP_01064077.1| putative deoxycytidylate deaminase [Vibrio sp. MED222] gi|218676904|ref|YP_002395723.1| putative deoxycytidylate deaminase [Vibrio splendidus LGP32] gi|84379821|gb|EAP96672.1| putative deoxycytidylate deaminase [Vibrio splendidus 12B01] gi|85836447|gb|EAQ54576.1| putative deoxycytidylate deaminase [Vibrio sp. MED222] gi|218325172|emb|CAV27073.1| putative deoxycytidylate deaminase [Vibrio splendidus LGP32] Length = 147 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV +N+I+S N T HAE AI R L Sbjct: 27 VGAVITKHNRIVSVGFNGYPHGVSDSADTDDREMKYLKTLHAEENAILFAKR-----DLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 +++VT PC CAA I I + Sbjct: 82 SCEVWVTHFPCPNCAAKIIQTGISAV 107 >gi|167038484|ref|YP_001666062.1| CMP/dCMP deaminase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167038773|ref|YP_001661758.1| CMP/dCMP deaminase [Thermoanaerobacter sp. X514] gi|166853013|gb|ABY91422.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter sp. X514] gi|166857318|gb|ABY95726.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter pseudethanolicus ATCC 33223] Length = 149 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGA+ V++ IIS N +L + HAE AI Sbjct: 27 VGAILVVDKHIISTGYNGPPTGLAHCEETGCLREQLGIPSGERPELCRGVHAEQNAIIQA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L LYV+ PC +CA + A ++R+ Y Sbjct: 87 A--LHGVSTKGATLYVSASPCVICAKMLINAGVKRIVY 122 >gi|238501998|ref|XP_002382233.1| deoxycytidylate deaminase, putative [Aspergillus flavus NRRL3357] gi|220692470|gb|EED48817.1| deoxycytidylate deaminase, putative [Aspergillus flavus NRRL3357] Length = 343 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 35/122 (28%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50 FM A AQ + R VG V V ++IS N E Sbjct: 194 DQYFMQLASLAAQRSNCMKRR---VGCVLVRECRVISTGYNGTPRHLRNCNEAGCPRCNR 250 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE A+ R +E LY PC C I+ I + Sbjct: 251 GEGGGVGLSTCLCLHAEENALLEAGRERIRE---GTILYCDTCPCLTCTVKIAQVGISEV 307 Query: 99 YY 100 Y Sbjct: 308 VY 309 >gi|317028119|ref|XP_001400617.2| deoxycytidylate deaminase [Aspergillus niger CBS 513.88] Length = 349 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 36/122 (29%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50 FM A AQ + R VG V V + ++IS N E Sbjct: 194 DQYFMELASLAAQRSNCMKRR---VGCVLVRDRRVISTGYNGTPRHIRNCNEGGCPRCNR 250 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE A+ R +E LY PC C I+ I + Sbjct: 251 GEGGGVGLSTCLCLHAEENALLEAGRERIRE---GAILYCDTCPCLTCTVKITQVGITEV 307 Query: 99 YY 100 Y Sbjct: 308 VY 309 >gi|254497578|ref|ZP_05110366.1| riboflavin biosynthesis protein RibD [Legionella drancourtii LLAP12] gi|254353194|gb|EET11941.1| riboflavin biosynthesis protein RibD [Legionella drancourtii LLAP12] Length = 351 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 18/112 (16%) Query: 4 GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 F+ ALE+A+ VGAVAV N II++ + T HAE L + Sbjct: 2 HKKFLLAALEQARLGQGFCAPNPCVGAVAVQNGNIIAQTCHH----GAGTPHAEQLLL-- 55 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAIS-LARIRRLYYGASNPK 106 P V LY++LEPC C I I + + ++P Sbjct: 56 ---AQIPPKTPGVSLYISLEPCNHWGRTPPCVDVIINHGGIEHVIFAYADPN 104 >gi|222624084|gb|EEE58216.1| hypothetical protein OsJ_09181 [Oryza sativa Japonica Group] Length = 396 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 22/150 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M +E A+ AA P VG V V + +++ + K HAE+ A+R Sbjct: 51 DGHYMRRCVELARKAAGHTSPNPMVGCVVVRDGRVVGEGFH----PKAGQPHAEVFALRD 106 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YV+LEPC C A+ A+++ + G ++P G + Sbjct: 107 AGDLAEN-----ATAYVSLEPCNHYGRTPPCTEALINAKVKDVVVGMTDPNPIVASKGIE 161 Query: 116 FYTLATCHHSPEIYPGISEQR-SRQIIQDF 144 A ++ + E+ R++ + + Sbjct: 162 RLRSAG----IDVRLCVDEEASCRKLNEAY 187 >gi|69247261|ref|ZP_00604279.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Enterococcus faecium DO] gi|257878126|ref|ZP_05657779.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,230,933] gi|257881089|ref|ZP_05660742.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,502] gi|257884751|ref|ZP_05664404.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,501] gi|257889675|ref|ZP_05669328.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,410] gi|257892388|ref|ZP_05672041.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,408] gi|258616373|ref|ZP_05714143.1| comE operon protein 2, putative [Enterococcus faecium DO] gi|260559174|ref|ZP_05831360.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium C68] gi|261207708|ref|ZP_05922393.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium TC 6] gi|289566284|ref|ZP_06446715.1| ComE operon protein 2 [Enterococcus faecium D344SRF] gi|293552881|ref|ZP_06673539.1| ComE operon protein 2 [Enterococcus faecium E1039] gi|293563910|ref|ZP_06678333.1| ComE operon protein 2 [Enterococcus faecium E1162] gi|293569408|ref|ZP_06680705.1| dCMP deaminase [Enterococcus faecium E1071] gi|294615862|ref|ZP_06695704.1| ComE operon protein 2 [Enterococcus faecium E1636] gi|294617297|ref|ZP_06696938.1| putative competence protein [Enterococcus faecium E1679] gi|294623507|ref|ZP_06702355.1| ComE operon protein 2 [Enterococcus faecium U0317] gi|314937547|ref|ZP_07844875.1| ComE operon protein 2 [Enterococcus faecium TX0133a04] gi|314941461|ref|ZP_07848350.1| ComE operon protein 2 [Enterococcus faecium TX0133C] gi|314949641|ref|ZP_07852962.1| ComE operon protein 2 [Enterococcus faecium TX0082] gi|314951823|ref|ZP_07854861.1| ComE operon protein 2 [Enterococcus faecium TX0133A] gi|314992768|ref|ZP_07858172.1| ComE operon protein 2 [Enterococcus faecium TX0133B] gi|314996525|ref|ZP_07861563.1| ComE operon protein 2 [Enterococcus faecium TX0133a01] gi|68194934|gb|EAN09403.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Enterococcus faecium DO] gi|257812354|gb|EEV41112.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,230,933] gi|257816747|gb|EEV44075.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,502] gi|257820589|gb|EEV47737.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,501] gi|257826035|gb|EEV52661.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,410] gi|257828767|gb|EEV55374.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,408] gi|260074931|gb|EEW63247.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium C68] gi|260078091|gb|EEW65797.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium TC 6] gi|289161924|gb|EFD09793.1| ComE operon protein 2 [Enterococcus faecium D344SRF] gi|291587934|gb|EFF19785.1| dCMP deaminase [Enterococcus faecium E1071] gi|291591248|gb|EFF22915.1| ComE operon protein 2 [Enterococcus faecium E1636] gi|291596454|gb|EFF27706.1| putative competence protein [Enterococcus faecium E1679] gi|291597101|gb|EFF28304.1| ComE operon protein 2 [Enterococcus faecium U0317] gi|291603015|gb|EFF33209.1| ComE operon protein 2 [Enterococcus faecium E1039] gi|291604143|gb|EFF33654.1| ComE operon protein 2 [Enterococcus faecium E1162] gi|313589311|gb|EFR68156.1| ComE operon protein 2 [Enterococcus faecium TX0133a01] gi|313592701|gb|EFR71546.1| ComE operon protein 2 [Enterococcus faecium TX0133B] gi|313595997|gb|EFR74842.1| ComE operon protein 2 [Enterococcus faecium TX0133A] gi|313599713|gb|EFR78556.1| ComE operon protein 2 [Enterococcus faecium TX0133C] gi|313643090|gb|EFS07670.1| ComE operon protein 2 [Enterococcus faecium TX0133a04] gi|313643980|gb|EFS08560.1| ComE operon protein 2 [Enterococcus faecium TX0082] Length = 179 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 20/113 (17%) Query: 4 GNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNR---------------NREL 47 FM+ A+ + + R E VGA V +II+ N Sbjct: 28 DQYFMAQAVLLSLRSTCTRLE--VGATLVREKRIIAGGYNGAVSGDVHCIDEGCYVVDGH 85 Query: 48 KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ A+ C L ++YVT PC C A+ A ++ + Y Sbjct: 86 CLRTIHAEMNALLQ-CAKLGIPT-EGSEIYVTHFPCLACTKALLQAGVKGINY 136 >gi|259500880|ref|ZP_05743782.1| competence protein ComEB [Lactobacillus iners DSM 13335] gi|302190667|ref|ZP_07266921.1| ComE operon protein 2 [Lactobacillus iners AB-1] gi|309803656|ref|ZP_07697746.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 11V1-d] gi|309805762|ref|ZP_07699799.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 09V1-c] gi|309805965|ref|ZP_07699992.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 03V1-b] gi|309809164|ref|ZP_07703037.1| putative ComE operon protein 2 [Lactobacillus iners SPIN 2503V10-D] gi|312871238|ref|ZP_07731336.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 3008A-a] gi|312872692|ref|ZP_07732757.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 2062A-h1] gi|312874090|ref|ZP_07734125.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 2052A-d] gi|312874953|ref|ZP_07734972.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 2053A-b] gi|315654038|ref|ZP_07906954.1| competence protein comEB [Lactobacillus iners ATCC 55195] gi|329920925|ref|ZP_08277474.1| putative ComE operon protein 2 [Lactobacillus iners SPIN 1401G] gi|259167574|gb|EEW52069.1| competence protein ComEB [Lactobacillus iners DSM 13335] gi|308164254|gb|EFO66511.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 11V1-d] gi|308164882|gb|EFO67128.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 09V1-c] gi|308167647|gb|EFO69799.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 03V1-b] gi|308170609|gb|EFO72629.1| putative ComE operon protein 2 [Lactobacillus iners SPIN 2503V10-D] gi|311089698|gb|EFQ48123.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 2053A-b] gi|311090430|gb|EFQ48839.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 2052A-d] gi|311091734|gb|EFQ50113.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 2062A-h1] gi|311093252|gb|EFQ51598.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 3008A-a] gi|315488734|gb|EFU78380.1| competence protein comEB [Lactobacillus iners ATCC 55195] gi|328935490|gb|EGG31961.1| putative ComE operon protein 2 [Lactobacillus iners SPIN 1401G] Length = 157 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 18/111 (16%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---LKD------------ 49 FM AL +Q + + VG+V V + ++I+ N + D Sbjct: 10 QYFMMQALVISQRSTCDRAL-VGSVLVKDKRMIATGYNGSVTGEPHCDDEGHLMVDGHCV 68 Query: 50 VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H+E+ A+ + +YVT PC C A+ A I + Y Sbjct: 69 RTIHSEMNALIQCAKNGIST--EGCAIYVTHFPCFNCTKALVQAGIVEVNY 117 >gi|170584686|ref|XP_001897125.1| dCMP deaminase [Brugia malayi] gi|158595455|gb|EDP34008.1| dCMP deaminase, putative [Brugia malayi] Length = 205 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 40/119 (33%), Gaps = 31/119 (26%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNREL---------KDV- 50 FM A A + P VGAV V +K I+ N KD Sbjct: 47 EYFMGVAHMAALRSKD----PITQVGAVIVNQDKRIVGSGYNGMPTGCSDDVLPWGKDPE 102 Query: 51 ---------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI +I+ + +Y L PC CA I A I + + Sbjct: 103 NFLENKSAYVCHAELNAILN--KIVGS--IKGSTIYTVLFPCNECAKLIIQAGISEVVF 157 >gi|165918851|ref|ZP_02218937.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii RSA 334] gi|165917483|gb|EDR36087.1| cytidine/deoxycytidylate deaminase family protein [Coxiella burnetii RSA 334] Length = 92 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 16/65 (24%) Query: 41 GNRNRELKDVTAHAEILAIRMGCRILSQEIL----------------PEVDLYVTLEPCT 84 N + + D TAHAE+ IR R L+ L +Y + EPC Sbjct: 19 HNHSVDWHDPTAHAEMSVIRKAARELNVTDLGHIRKEDSKLSQPSEWSHCVIYSSAEPCP 78 Query: 85 MCAAA 89 MC A Sbjct: 79 MCMAT 83 >gi|145500018|ref|XP_001435993.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124403130|emb|CAK68596.1| unnamed protein product [Paramecium tetraurelia] Length = 256 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 14/114 (12%) Query: 28 AVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL-----------SQEILPEVD 75 + + N I+ A + + H ++A+ SQ E+ Sbjct: 142 CILYNDENTIVIEA--EDETHINNVRHCVMVAMEKLAEHNLNENHQRHFLESQYYAREMT 199 Query: 76 LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 L EPC MCA A+ +RI +YY GG+ + Q + +H ++ Sbjct: 200 LVTYFEPCIMCAMALIHSRINEVYYYQKRVTDGGLNDQLQVNNMKQLNHKYLVF 253 >gi|162456661|ref|YP_001619028.1| riboflavin biosynthesis protein ribD [Sorangium cellulosum 'So ce 56'] gi|161167243|emb|CAN98548.1| Riboflavin biosynthesis protein ribD [Sorangium cellulosum 'So ce 56'] Length = 187 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 42/130 (32%), Gaps = 20/130 (15%) Query: 1 MKKG-NVFMSCALEEAQNA-ALRNEIP-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEI 56 M +M A+EEA+ A + P VG V +++ E Sbjct: 1 MSNDPEKWMRLAIEEAERARGGTGDNPWVGCAIVSAAGELLGSGHTL--------GPGED 52 Query: 57 LAIRMGCRILSQEILP--EVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108 A R L LY TLEPC C+ +I + R+ G ++P Sbjct: 53 HAEIAAARAAHARGLSVVGATLYSTLEPCSFHGRTPACSRSIVERGVARVVIGMNDPNPR 112 Query: 109 GIENGTQFYT 118 G + Sbjct: 113 VDGEGVRILR 122 >gi|95929569|ref|ZP_01312311.1| CMP/dCMP deaminase, zinc-binding [Desulfuromonas acetoxidans DSM 684] gi|95134266|gb|EAT15923.1| CMP/dCMP deaminase, zinc-binding [Desulfuromonas acetoxidans DSM 684] Length = 146 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 27/105 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGAV V + +++ N +++ + HAE AI Sbjct: 18 VGAVIVKDKNVLTTGYNGTPSGVRHCQETGCLREKMQVPSGQRHELCRGLHAEQNAIIQA 77 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNP 105 + + LY T PC +CA + A + R+ Y G + Sbjct: 78 AKHGVN--ISGGTLYCTNAPCVICAKMLINAGLSRIVYLDGYPDD 120 >gi|311993486|ref|YP_004010351.1| Cd dCMP deaminase [Acinetobacter phage Acj9] gi|295917443|gb|ADG60114.1| Cd dCMP deaminase [Acinetobacter phage Acj9] Length = 181 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 39/116 (33%), Gaps = 43/116 (37%) Query: 26 VGAVAVLNNKIISRAGN------------------------------------RNRELKD 49 VGAV N +IIS N R Sbjct: 24 VGAVIAKNGRIISTGYNGSPAGGVNCCDHSKEQGWLGFINMHTPQHQRTYLKPECRSDHS 83 Query: 50 V--TA---HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 +A HAE+ AI + + +YVTL PC CA AI+ + IR+L Y Sbjct: 84 AWSSANEIHAELNAILYAAKNGLA--IDGATMYVTLSPCADCAKAIANSGIRQLVY 137 >gi|312881768|ref|ZP_07741542.1| putative deoxycytidylate deaminase [Vibrio caribbenthicus ATCC BAA-2122] gi|309370519|gb|EFP97997.1| putative deoxycytidylate deaminase [Vibrio caribbenthicus ATCC BAA-2122] Length = 153 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 18/86 (20%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72 VGAV N+I+S N T HAE AI R L Sbjct: 27 VGAVITQQNRIVSVGFNGYPHGISDSAETDDREMKYLKTLHAEENAILFAKR-----NLD 81 Query: 73 EVDLYVTLEPCTMCAAAISLARIRRL 98 + +++VT PC CAA I I + Sbjct: 82 DCEIWVTHFPCPNCAAKIIQTGICAV 107 >gi|291520267|emb|CBK75488.1| Deoxycytidylate deaminase [Butyrivibrio fibrisolvens 16/4] Length = 161 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 44/122 (36%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRN-----------R 45 + FM A+ + P VGA V +NKI+S N Sbjct: 9 ISWDEYFMGVAVLSGMRSKD----PNTQVGACIVSQDNKILSMGYNGFPNGCSDDEFPWA 64 Query: 46 ELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + D T H+E+ AI L LYV+L PC CA AI + I+ + Sbjct: 65 RVGDPLENKYFYTTHSELNAILN----YRGGSLEGSKLYVSLFPCNECAKAIIQSGIKTI 120 Query: 99 YY 100 Y Sbjct: 121 IY 122 >gi|218191968|gb|EEC74395.1| hypothetical protein OsI_09744 [Oryza sativa Indica Group] Length = 396 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 22/150 (14%) Query: 4 GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 +M +E A+ AA P VG V V + +++ + K HAE+ A+R Sbjct: 51 DGHYMRRCVELARKAAGHTSPNPMVGCVVVRDGRVVGEGFH----PKAGQPHAEVFALRD 106 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 + YV+LEPC C A+ A+++ + G ++P G + Sbjct: 107 AGDLAEN-----ATAYVSLEPCNHYGRTPPCTEALINAKVKDVVVGMTDPNPIVASKGIE 161 Query: 116 FYTLATCHHSPEIYPGISEQR-SRQIIQDF 144 A ++ + E+ R++ + + Sbjct: 162 RLRSAG----IDVRLCVDEEASCRKLNEAY 187 >gi|164659978|ref|XP_001731113.1| hypothetical protein MGL_2112 [Malassezia globosa CBS 7966] gi|159105011|gb|EDP43899.1| hypothetical protein MGL_2112 [Malassezia globosa CBS 7966] Length = 58 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 27/45 (60%) Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 LYVT+EPC MCA+A+ I+R+ +GA N + GG ++ Sbjct: 4 TTLYVTIEPCLMCASALRQIGIQRVVFGAGNERFGGNGTVLPIHS 48 >gi|70954102|ref|XP_746114.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56526631|emb|CAH78767.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 294 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 34/59 (57%) Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135 Y+T EPC MCA A+ +R++ + + N + G + + + + L + +H ++Y + E+ Sbjct: 235 YLTHEPCFMCAMAMVHSRVKCVIFDKVNKQNGALFSKGKLHCLKSLNHHFKVYKTVREK 293 Score = 35.3 bits (81), Expect = 3.1, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 3/47 (6%) Query: 27 GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GCRILSQEILP 72 G V N+KII+ +G + H+ +LAI + + Sbjct: 127 GCVLTFNDKIIACSG--DNIKNHPLHHSVMLAIEEVAFNLRNIWRFK 171 >gi|312142508|ref|YP_003993954.1| CMP/dCMP deaminase zinc-binding protein [Halanaerobium sp. 'sapolanicus'] gi|311903159|gb|ADQ13600.1| CMP/dCMP deaminase zinc-binding protein [Halanaerobium sp. 'sapolanicus'] Length = 151 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 40/120 (33%), Gaps = 26/120 (21%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 FM A A+ A VGAV V + K+++ N EL Sbjct: 7 HEYFMEMAKLVAKRATCLRRR-VGAVLVKDRKVLATGYNGAPKDITHCEVTGCLRTELDI 65 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE + + +Y T +PC +C + A + ++YY Sbjct: 66 PSGERHEICRGVHAEQNLVAQAAFHGVKT--EGSTVYCTNQPCIICTKILINAGVNKIYY 123 >gi|312880695|ref|ZP_07740495.1| CMP/dCMP deaminase zinc-binding [Aminomonas paucivorans DSM 12260] gi|310783986|gb|EFQ24384.1| CMP/dCMP deaminase zinc-binding [Aminomonas paucivorans DSM 12260] Length = 170 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 39/120 (32%), Gaps = 26/120 (21%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 F+ AL A + VGAV V ++ ++S N L Sbjct: 9 DEYFLRIALVVASRSTCLRRH-VGAVIVRDHYMVSTGYNGAPRGVPHCAEVGCLRERLGI 67 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + H EI A+ + LY T EPC+ C A+ IR + + Sbjct: 68 PSGERHEMCRGSHGEINALSQAAAMGVST--AGGILYCTHEPCSFCTKALINGGIREMVF 125 >gi|33866124|ref|NP_897683.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Synechococcus sp. WH 8102] gi|33639099|emb|CAE08105.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase [Synechococcus sp. WH 8102] Length = 354 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 42/131 (32%), Gaps = 20/131 (15%) Query: 26 VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83 VGAV + +++ + HAE+ + L VTLEPC Sbjct: 26 VGAVVLNREGRLVGEGFHARSGE----PHAEVG-----ALAQAGTAAAGGTLIVTLEPCC 76 Query: 84 -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138 C+ A+ A + R+ +P G A + G+ Q + Sbjct: 77 HHGRTPPCSRAVLQAGVARVVVALEDPDPRVAGGGIAQLRKAG----VVVITGVLRQEAA 132 Query: 139 QIIQDFFKERR 149 + + F R Sbjct: 133 EQNRAFLHRVR 143 >gi|197123236|ref|YP_002135187.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter sp. K] gi|196173085|gb|ACG74058.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter sp. K] Length = 392 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 57/149 (38%), Gaps = 21/149 (14%) Query: 5 NVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A+ EA R VGAV V + +++ R + HAE++ Sbjct: 26 ERFMRLAVREAARGLGRTSPNPAVGAVVVRDGRVVGRGHHARAGG----PHAEVV----- 76 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + + D+Y TLEPC C+ A+ A +RR++ G+S+P G Sbjct: 77 ALRAAGALARGADVYTTLEPCDHFGKTPPCSVALLEAGVRRVFVGSSDPNPLVNGRGMAR 136 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145 H + G+ ++ +F Sbjct: 137 LR----RHGVAVVKGVLRAECDRLNAPWF 161 >gi|121997691|ref|YP_001002478.1| riboflavin biosynthesis protein RibD [Halorhodospira halophila SL1] gi|121589096|gb|ABM61676.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Halorhodospira halophila SL1] Length = 371 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 40/136 (29%), Gaps = 35/136 (25%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC--------RILSQEILPEVDLY 77 VG V V + +++ A AH + Y Sbjct: 34 VGCVLVRDGSVLAEA-----------AH------EQAGGPHAEAAALQAAGGAAHGATAY 76 Query: 78 VTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 VTLEPC CA A+ A + R+ G +P G A + G Sbjct: 77 VTLEPCAHYGRTPPCARALIDAGVSRVVVGHRDPNPRVAGGGIAQLEAAG----VAVTEG 132 Query: 132 ISEQRSRQIIQDFFKE 147 + + + + F + Sbjct: 133 VLAADAEALNRGFLRR 148 >gi|326389256|ref|ZP_08210824.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter ethanolicus JW 200] gi|325994619|gb|EGD53043.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter ethanolicus JW 200] Length = 147 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGA+ V++ IIS N +L + HAE AI Sbjct: 27 VGAILVVDKHIISTGYNGPPTGLAHCEETGCLREQLGIPSGERPELCRGVHAEQNAIIQA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L LYV+ PC +CA + A ++R+ Y Sbjct: 87 A--LHGVSTKGATLYVSASPCVICAKMLINAGVKRIVY 122 >gi|209881015|ref|XP_002141946.1| cytidine/deoxycytidylate deaminase family protein [Cryptosporidium muris RN66] gi|209557552|gb|EEA07597.1| cytidine/deoxycytidylate deaminase family protein [Cryptosporidium muris RN66] Length = 380 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 41/129 (31%), Gaps = 45/129 (34%) Query: 4 GNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-------- 52 FM A ++ + + VG+V V NN+IIS N TA Sbjct: 231 DEYFMKLAWLTSKRSNCIRRK----VGSVLVKNNRIISTGYNGT-----PTATTNCFEGG 281 Query: 53 ---------------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAIS 91 HAE + + + + LYVT PC CA I Sbjct: 282 CIRCTNINVINGTNLEYCNCIHAESNVLFYAGK----DKCEDSILYVTCLPCLTCAKHII 337 Query: 92 LARIRRLYY 100 I ++ Y Sbjct: 338 QCGIIKVIY 346 >gi|91088935|ref|XP_973512.1| PREDICTED: similar to Deoxycytidylate deaminase (dCMP deaminase) [Tribolium castaneum] gi|270011567|gb|EFA08015.1| hypothetical protein TcasGA2_TC005604 [Tribolium castaneum] Length = 178 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 40/120 (33%), Gaps = 32/120 (26%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRN------------REL 47 FMS L AQ + P VGA V +I N + Sbjct: 17 HEHFMSFCLLAAQRSKD----PCTQVGACVVDRQGNLIGSGYNGMPRGCHDDEFPWGKRS 72 Query: 48 KDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 +D HAE+ AI + + + +YVTL PC CA I I + Y Sbjct: 73 EDPLENKHLYVCHAELNAI-----ANTTGTMNDCVIYVTLFPCNECAKLIIQNGISEVVY 127 >gi|295109528|emb|CBL23481.1| Deoxycytidylate deaminase [Ruminococcus obeum A2-162] Length = 164 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 44/122 (36%), Gaps = 24/122 (19%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGN--------------RNR 45 + FM A+ + N VGA V +NKI+S N R Sbjct: 12 ISWDEYFMGVAMLSGMRSKDPNSQ-VGACIVSEDNKILSMGYNGFPKGCSDDEFPWAREG 70 Query: 46 ELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 E D H+E+ AI L LYV+L PC CA AI A I+ + Y Sbjct: 71 EPLDTKYLYVTHSELNAILN----YRGGSLEGAKLYVSLFPCNECAKAIIQAGIKTVIYD 126 Query: 102 AS 103 Sbjct: 127 CD 128 >gi|256751351|ref|ZP_05492230.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter ethanolicus CCSD1] gi|300913642|ref|ZP_07130959.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter sp. X561] gi|307723343|ref|YP_003903094.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter sp. X513] gi|320116879|ref|YP_004187038.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|256749733|gb|EEU62758.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter ethanolicus CCSD1] gi|300890327|gb|EFK85472.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter sp. X561] gi|307580404|gb|ADN53803.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter sp. X513] gi|319929970|gb|ADV80655.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 155 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGA+ V++ IIS N +L + HAE AI Sbjct: 33 VGAILVVDKHIISTGYNGPPTGLAHCEETGCLREQLGIPSGERPELCRGVHAEQNAIIQA 92 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L LYV+ PC +CA + A ++R+ Y Sbjct: 93 A--LHGVSTKGATLYVSASPCVICAKMLINAGVKRIVY 128 >gi|167755827|ref|ZP_02427954.1| hypothetical protein CLORAM_01343 [Clostridium ramosum DSM 1402] gi|237734796|ref|ZP_04565277.1| deoxycytidylate deaminase [Mollicutes bacterium D7] gi|167704766|gb|EDS19345.1| hypothetical protein CLORAM_01343 [Clostridium ramosum DSM 1402] gi|229382124|gb|EEO32215.1| deoxycytidylate deaminase [Coprobacillus sp. D7] Length = 154 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 46/135 (34%), Gaps = 34/135 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN-------------- 42 + FM A A + P VGA V NKI+ N Sbjct: 5 INWTQYFMGVAKLSAFRSKD----PNTQVGACIVNEANKIVGVGYNGLPWGCEDNEFPWE 60 Query: 43 ----RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 E K HAE+ AI + S L +YV+L PC C AI + I Sbjct: 61 VREGDLYETKYPYVVHAELNAI-----LNSTGQLKGCRIYVSLFPCHECVKAIIQSGISE 115 Query: 98 LYYGASNPKGGGIEN 112 + Y + K G ++ Sbjct: 116 IVY--EDDKYKGTDS 128 >gi|255712643|ref|XP_002552604.1| KLTH0C08756p [Lachancea thermotolerans] gi|238933983|emb|CAR22166.1| KLTH0C08756p [Lachancea thermotolerans] Length = 610 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 57/153 (37%), Gaps = 26/153 (16%) Query: 1 MKKGNVFMSCALEEAQN------AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA 54 ++ +M A+ EA+ A VGAV ++K++S +R HA Sbjct: 454 LEPHRKYMEMAINEAKKCGPTTTAFS-----VGAVLTNSDKVLSTGFSRELPGN---THA 505 Query: 55 EILAIRMGCRILSQEIL-PEVDLYVTLEPCT-------MCAAAISLA--RIRRLYYGASN 104 E A+ + P LY T+EPC+ C I A IR ++ G Sbjct: 506 EQCALEKYFEQSGNRSVPPGSVLYTTMEPCSFRLSGNKPCVDRIIDASKSIRTVFVGVME 565 Query: 105 PKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 P ++N T L+ + PG E+ Sbjct: 566 PDT-FVKNNTSKTKLSQHEIDYVLIPGY-EEDC 596 >gi|255101026|ref|ZP_05330003.1| putative phage-related deoxycytidylate deaminase (putative late competence protein) [Clostridium difficile QCD-63q42] Length = 145 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 19/112 (16%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNR-----------ELKDV-- 50 FM A+ VGA+ V N+I+S N + E++D Sbjct: 13 EYFMRLCETVAERGTCDRAY-VGAIIVNSENRIVSTGYNGSISGDKHCSEVGHEMRDGHC 71 Query: 51 --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE A+ + + +YVT PC C AI A I+ +YY Sbjct: 72 IRTIHAEQNALYYCAKEGIS--VKNCSIYVTHFPCLNCTKAIIQAGIKHIYY 121 >gi|6226765|sp|O24750|RIBD_CORAM RecName: Full=Riboflavin biosynthesis protein RibD; Includes: RecName: Full=Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Short=DRAP deaminase; AltName: Full=Riboflavin-specific deaminase; Includes: RecName: Full=5-amino-6-(5-phosphoribosylamino)uracil reductase; AltName: Full=HTP reductase gi|21914864|dbj|BAA20053.1| ribG [Corynebacterium ammoniagenes] Length = 337 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 38/106 (35%), Gaps = 17/106 (16%) Query: 25 PVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 PVGAV + + +I+ + HAE+ A+ VTLEPC Sbjct: 38 PVGAVIISTSGEIVGTGATQPVGG----VHAEVQALADAAGKT-----EGATAVVTLEPC 88 Query: 84 TM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 C A+ A I+ + + S+P G Q A + Sbjct: 89 RHTGRTGPCTQALIEAGIKDVLFLHSDPNPSA-GGGEQVLVDAGIN 133 >gi|332980851|ref|YP_004462292.1| CMP/dCMP deaminase zinc-binding protein [Mahella australiensis 50-1 BON] gi|332698529|gb|AEE95470.1| CMP/dCMP deaminase zinc-binding protein [Mahella australiensis 50-1 BON] Length = 170 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGA+ V + ++++ N ++ + HAE AI Sbjct: 27 VGAIIVKDKRMLASGYNGAPSGVRHCDEVGCLREQMHIPSGQRQELCRAIHAEQNAIAQA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + + + +Y+T +PC +CA I A I R+ Y Sbjct: 87 A--MMGISVKDATIYITTQPCAICAKMIINAGITRIVY 122 >gi|300122215|emb|CBK22788.2| unnamed protein product [Blastocystis hominis] Length = 288 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 39/123 (31%), Gaps = 31/123 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN-------------R 43 + FM A A + P VGA V N+I+ N Sbjct: 124 ISWDEYFMGLACLSAMRSKD----PNTQVGACIVNAYNQIVGIGYNGFPRGCSDDVLPWS 179 Query: 44 NRELKDV------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 ++ HAE+ AI ++ +YV+L PC C I + I Sbjct: 180 REGDNELDTKYMYVCHAEMNAILN----INTANARGCKMYVSLFPCNNCCKMIIQSGIVE 235 Query: 98 LYY 100 + Y Sbjct: 236 VIY 238 >gi|261886453|ref|ZP_06010492.1| riboflavin biosynthesis protein RibD [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 330 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 51/150 (34%), Gaps = 40/150 (26%) Query: 26 VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI------------------- 65 VG V N +I+S N + + HAE+ AI+ + Sbjct: 21 VGCVITGKNGEILSI--NAHEKAGMP--HAELNAIKYALEMKNPAFKQDFDEIKDTNELY 76 Query: 66 -----LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 +L YVTLEPC CA + +++ GA + G Sbjct: 77 NFIMQNHSNLLNGSTAYVTLEPCSHQGRTPPCANLLKELGFKQVIIGAIDSSENAKG-GE 135 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 Q + G+ ++++ ++++ F Sbjct: 136 QILKNSGIKTKI----GVCKEKADELLEPF 161 >gi|242217142|ref|XP_002474373.1| predicted protein [Postia placenta Mad-698-R] gi|220726480|gb|EED80428.1| predicted protein [Postia placenta Mad-698-R] Length = 272 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 39/117 (33%), Gaps = 24/117 (20%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------RNRELK 48 FM A E A + + VGA+ V N +I++ N R K Sbjct: 132 DAYFMQLA-ELASERSNCMKRRVGAILVRNKRILATGYNGTPRGLTNCNEGGCTRCNSGK 190 Query: 49 DVTA-----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + + HAE A+ R + LY PC C I ++ + Y Sbjct: 191 EASDECVCLHAEENALLEAGRERVGD---GAVLYCNTCPCLKCTIKIIQTGVKEVVY 244 >gi|307265640|ref|ZP_07547193.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter wiegelii Rt8.B1] gi|306919284|gb|EFN49505.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter wiegelii Rt8.B1] Length = 147 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGA+ V++ IIS N +L + HAE AI Sbjct: 27 VGAILVVDKHIISTGYNGPPTGLAHCEDTGCLREQLGIPSGERPELCRGVHAEQNAIIQA 86 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L LYV+ PC +CA + A ++R+ Y Sbjct: 87 A--LHGVSTKGATLYVSASPCVICAKMLINAGVKRIVY 122 >gi|163753563|ref|ZP_02160686.1| deoxycytidylate deaminase [Kordia algicida OT-1] gi|161325777|gb|EDP97103.1| deoxycytidylate deaminase [Kordia algicida OT-1] Length = 144 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 41/116 (35%), Gaps = 25/116 (21%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA--------- 52 K + ++ A E + + + + VGA+ V + IIS N + Sbjct: 8 KYDHAYLRMAKEWGKLSYCKRKQ-VGAIIVKDRMIISDGYNGT-----PSGFENFCEDEE 61 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI LY+T+ PC C+ I A I R+ Y Sbjct: 62 GYTKWYVLHAEANAILKVAASTQS--CVGATLYITMSPCKECSKLIHQAGITRVVY 115 >gi|169350182|ref|ZP_02867120.1| hypothetical protein CLOSPI_00926 [Clostridium spiroforme DSM 1552] gi|169292965|gb|EDS75098.1| hypothetical protein CLOSPI_00926 [Clostridium spiroforme DSM 1552] Length = 154 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 48/135 (35%), Gaps = 34/135 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN-------------- 42 + FM A A + P VGA V NKI+ N Sbjct: 5 INWTQYFMGVAKLSAFRSKD----PNTQVGACIVSPENKIVGVGYNGLPWGCDDKEFPWE 60 Query: 43 -RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 R +L D HAE+ AI + S L +YV+L PC C AI + I Sbjct: 61 VREGDLYDTKYPYVVHAELNAI-----LNSIGNLKGCRIYVSLFPCHECVKAIIQSGISE 115 Query: 98 LYYGASNPKGGGIEN 112 + + + K G ++ Sbjct: 116 IVF--EDDKYSGTDS 128 >gi|32453705|ref|NP_861914.1| deoxycytidylate deaminase [Enterobacteria phage RB69] gi|32350524|gb|AAP76123.1| Cd dCMP deaminase [Enterobacteria phage RB69] Length = 169 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE+ AI R + + LY TL PC C AI+ + I+++ Y Sbjct: 104 HAELNAILFAARKGNS--IEGATLYTTLSPCPDCTKAITQSGIKKVVYA 150 >gi|299779161|ref|YP_003734355.1| Cd dCMP deaminase [Enterobacteria phage IME08] gi|298105890|gb|ADI55534.1| Cd dCMP deaminase [Enterobacteria phage IME08] Length = 181 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 39/117 (33%), Gaps = 43/117 (36%) Query: 26 VGAVAVLNNKIISRAGNR-----------------NRELKDVTA---------------- 52 VGAV N +IIS N R + D Sbjct: 24 VGAVIEKNGRIISTGYNGSPSGGVNCCDHAVEQDWTRVVYDPARMSHKSVLLKEHRMAHA 83 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE+ AI R S + +YVTL PC CA +I+ + I+ L Y Sbjct: 84 AWSSKNEIHAELNAILFAARTGSS--IDGATMYVTLSPCADCAKSIAQSGIKTLVYA 138 >gi|149247534|ref|XP_001528176.1| hypothetical protein LELG_00696 [Lodderomyces elongisporus NRRL YB-4239] gi|146448130|gb|EDK42518.1| hypothetical protein LELG_00696 [Lodderomyces elongisporus NRRL YB-4239] Length = 360 Score = 62.2 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 43/123 (34%), Gaps = 25/123 (20%) Query: 43 RNRELKD----VTAHAEILAIRMGC------RILSQEILPE------------VD---LY 77 + + D T H+ + AI R +E +Y Sbjct: 226 QTIAINDGDLRPTKHSVMQAIDQIAKEELGKREKDEEDFNGDEKRIERERGYLCTNMIVY 285 Query: 78 VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137 T EPC MC+ A+ +RI R Y GGG+E+ + I+ + EQ Sbjct: 286 TTHEPCVMCSMALVHSRIVRCTYLKPVANGGGMESSYYLGDRDGLNWKFNIWRWLGEQEL 345 Query: 138 RQI 140 +++ Sbjct: 346 QKL 348 >gi|47459365|ref|YP_016227.1| deoxycytidylate deaminase competance related protein [Mycoplasma mobile 163K] gi|47458695|gb|AAT28016.1| deoxycytidylate deaminase competance related protein [Mycoplasma mobile 163K] Length = 154 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 30/119 (25%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNR--NRELKDVTA----- 52 + FM ++ +ALR++ P VGA V +NK ++S N + K+ + Sbjct: 9 HSYFM----ALSKVSALRSKDPNTKVGACIVDDNKRVVSLGYNGMPRGDDKNFSWKRDNE 64 Query: 53 -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAEI AI + + + LYV+L PC+ CA I+ I +LYY Sbjct: 65 KAADNKYAYVIHAEINAILNANKQIDSK----CVLYVSLFPCSNCAKIIAQVGINQLYY 119 >gi|260223396|emb|CBA33920.1| Probable deoxycytidylate deaminase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 185 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 40/121 (33%), Gaps = 32/121 (26%) Query: 4 GNVFMSCALEEA---QNAALRNEIPVGAVAV-LNNKIISRAGNRN--------------- 44 ++FM AL A ++A RN GA V +NKI N Sbjct: 20 HSMFMGVALLAAARSKDARKRN----GACIVGPDNKISGVGYNGLPRGCDDHDEHYWQDD 75 Query: 45 -----RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 HAE AI + L +Y T PC C +I I+R+ Sbjct: 76 DSDPLNSRHSYIVHAEQNAILN----CTSLPLHGSTIYATQYPCPRCVQSIIQVGIKRVV 131 Query: 100 Y 100 Y Sbjct: 132 Y 132 >gi|260830687|ref|XP_002610292.1| hypothetical protein BRAFLDRAFT_126857 [Branchiostoma floridae] gi|229295656|gb|EEN66302.1| hypothetical protein BRAFLDRAFT_126857 [Branchiostoma floridae] Length = 267 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR 60 +M AL+ AQ+A PVGAV V +++I + + HA ++A+ Sbjct: 191 QKYMQRALQAAQHAKQTGMEPVGAVVVDPVADEVIGVGHDLRHA-GNPLHHAVMVAVD 247 >gi|301064678|ref|ZP_07205067.1| cytidine and deoxycytidylate deaminase zinc-binding region [delta proteobacterium NaphS2] gi|300441220|gb|EFK05596.1| cytidine and deoxycytidylate deaminase zinc-binding region [delta proteobacterium NaphS2] Length = 150 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 29/111 (26%) Query: 26 VGAVAVLNNKIISRAGN------------------------RNRELKDVTAHAEILAIRM 61 VGA+ V +I++ N EL HAE AI Sbjct: 30 VGAILVKEKRILATGYNGAPAGLKHCVEVGCLRENGSIPSGTRHELCRAL-HAEQNAIVQ 88 Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKGGGI 110 R + LY T +PC +C+ + A I+R+Y+ G + I Sbjct: 89 AARYGIS--IAGSTLYCTNKPCIICSKMLINAGIKRIYFDQGYDDELADAI 137 >gi|269986813|gb|EEZ93091.1| CMP/dCMP deaminase zinc-binding protein [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 159 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 32/97 (32%), Gaps = 27/97 (27%) Query: 28 AVAVLNNKIISRAG----------------------NRN--RELKDV-TAHAEILAIRMG 62 V V N+I++ N + T HAE AI Sbjct: 30 CVIVKENRILATGYAGSPKGMPHCDDVGHMLRKQYDNETGEITTHCIRTVHAEQNAITQA 89 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 + L YVT+EPC +CA + ++R+ Sbjct: 90 AKFGVS--LDGSTAYVTMEPCFVCAKMLVQVGVKRVV 124 >gi|319941045|ref|ZP_08015381.1| deoxycytidylate deaminase [Sutterella wadsworthensis 3_1_45B] gi|319805402|gb|EFW02204.1| deoxycytidylate deaminase [Sutterella wadsworthensis 3_1_45B] Length = 138 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 18/114 (15%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-----------V 50 K ++M A A+ + + + VG V V N+ IIS N D V Sbjct: 5 KDNLMYMRIAQIAAERSYAKR-LKVGCVIVKNHSIISFGWNGMPTGYDNCCEMEVDGKLV 63 Query: 51 TA----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE+ AI + + +++T PC CA I I +++Y Sbjct: 64 TRPEVQHAELNAI--AKLAENGYSSKDAAIFITHSPCIDCALLIQKCGISQVFY 115 >gi|255534332|ref|YP_003094703.1| Deoxycytidylate deaminase [Flavobacteriaceae bacterium 3519-10] gi|255340528|gb|ACU06641.1| Deoxycytidylate deaminase [Flavobacteriaceae bacterium 3519-10] Length = 141 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 15/109 (13%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVTA--- 52 ++ A+E A+ + VGA+ V + IIS N + + T Sbjct: 7 DFAYLKMAMEWAKLSHCERRK-VGALIVKDRMIISDGYNGTPSGFENCCEDSEGKTHWYV 65 Query: 53 -HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI S + + LY+TL PC C+ A I+++ Y Sbjct: 66 LHAEANAILKLA--GSTQSAKDATLYLTLSPCRDCSKLAVQAGIKKVVY 112 >gi|33620697|ref|NP_891789.1| dCMP deaminase [Enterobacteria phage RB49] gi|33438567|gb|AAL15123.2| dCMP deaminase [Enterobacteria phage RB49] Length = 168 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 48/141 (34%), Gaps = 43/141 (30%) Query: 5 NVFMSCALEEAQNA----ALRNEIPVGAVAVLNNKIISRAGN-----RNRELKDV----- 50 +M A A+N+ VGA+ + +IIS N + Sbjct: 4 QTYMQIAYLIAKNSKCVSWK-----VGALIEKDGRIISTGFNGTPAGQVNCSCHAHKSGW 58 Query: 51 ---------------TA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88 +A HAE+ AI R + ++ T PC CA Sbjct: 59 LDDDGKMIPEKRPEHSAWSQKNEIHAELNAILFAARNGVS--IEGASMWCTASPCPDCAK 116 Query: 89 AISLARIRRLYYGASNPKGGG 109 AI+ + I+ LYY + + GG Sbjct: 117 AIANSGIKHLYYCDTYDRNGG 137 >gi|254459001|ref|ZP_05072424.1| riboflavin biosynthesis protein RibD [Campylobacterales bacterium GD 1] gi|207084272|gb|EDZ61561.1| riboflavin biosynthesis protein RibD [Campylobacterales bacterium GD 1] Length = 336 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 66/172 (38%), Gaps = 42/172 (24%) Query: 5 NVFMSCALEEAQN--AALRNEIPVGAVAVLN-NKIIS-RAGNRNRELKDVTAHAEILAIR 60 + F++ AL+EA VG V N+++S A K HAE++A+R Sbjct: 6 SFFINLALKEAWKYQGLTYPNPAVGCTIVSPKNELLSVEAH-----KKSGLPHAEVMALR 60 Query: 61 MGCRILSQEI----------------------LPEVDLYVTLEPC------TMCAAAISL 92 L+ + ++ LY TLEPC CA+ IS Sbjct: 61 TAYFKLTNDSKILELTSSSEIHTFLLNNHNNCFRDISLYTTLEPCSHIGKTPSCASLISA 120 Query: 93 ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 I++++ G ++ GT+ + ++ I E+++ +I F Sbjct: 121 LGIKKVFVGFNDINEEASG-GTEILKKSG----VDVQSSILEKKAYDLIAPF 167 >gi|170037228|ref|XP_001846461.1| cytidine and deoxycytidylate deaminase zinc-binding region [Culex quinquefasciatus] gi|167880295|gb|EDS43678.1| cytidine and deoxycytidylate deaminase zinc-binding region [Culex quinquefasciatus] Length = 377 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + D+Y+T EPC MCA A++ +R+RR+++ G + + T+ + + + Sbjct: 310 AKYGPYLCTGYDVYLTHEPCIMCAMALTHSRVRRVFF-HRKTSRGALGSITKVHCVTGLN 368 Query: 124 HSPE 127 H E Sbjct: 369 HHYE 372 >gi|225456327|ref|XP_002283817.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297734422|emb|CBI15669.3| unnamed protein product [Vitis vinifera] Length = 229 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 42/128 (32%), Gaps = 39/128 (30%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42 + + FM+ A A+ + P VGA V N +I N Sbjct: 69 LSWDDYFMAIAFLSAERSKD----PNRQVGACLVSQNGVILGIGYNGFPRGCSDDKLPWA 124 Query: 43 RNRELKDVT-------AHAEILAI---RMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92 + + D HAE+ AI + LYVT+ PC CA I Sbjct: 125 KKSKTGDPLETKYPYVCHAEVNAILNTNHASAAGQR-------LYVTMFPCNECAKIIIQ 177 Query: 93 ARIRRLYY 100 + + + Y Sbjct: 178 SGVSEVIY 185 >gi|302335967|ref|YP_003801174.1| dCMP deaminase [Olsenella uli DSM 7084] gi|301319807|gb|ADK68294.1| dCMP deaminase [Olsenella uli DSM 7084] Length = 160 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 45/145 (31%), Gaps = 31/145 (21%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRN-----------R 45 + FM A+ + + P VGA N++I+S N Sbjct: 9 ISWDEFFMRVAIAASLRSKD----PKTQVGACIADTNDRILSVGYNGTPSGLDDDEFPWG 64 Query: 46 ELKDVT-------AHAEILAIRMGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRR 97 +D HAE AI + + +YVTL PC CA + A + Sbjct: 65 TSEDPLFDKHNYVIHAEANAI---LNYRGSLKDMQGAKVYVTLFPCQECAKTLVQAGVGE 121 Query: 98 LYYGASNPKGGGIENGTQFYTLATC 122 + Y + G N C Sbjct: 122 VIY-LDDKYDGTEGNRVSKSVFDRC 145 >gi|322510984|gb|ADX06297.1| deoxycytidylate deaminase domain-containing protein [Organic Lake phycodnavirus 2] Length = 142 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 13/86 (15%) Query: 26 VGAVAVLNNKIISRAGN---------RNRELKD--VTAHAEILAIRMGCRILSQEILPEV 74 VG + V +N+IIS+ N T HAE A+ + Sbjct: 31 VGCLIVRDNRIISQGYNGFLPGLPHTSVVVDNHEIATIHAEQNALTDCAKRGVSCDKS-- 88 Query: 75 DLYVTLEPCTMCAAAISLARIRRLYY 100 Y+T PC CA + A I+ +YY Sbjct: 89 VAYITHYPCLNCAKLLYSAGIKDIYY 114 >gi|154148617|ref|YP_001405744.1| riboflavin biosynthesis protein RibD [Campylobacter hominis ATCC BAA-381] gi|153804626|gb|ABS51633.1| riboflavin biosynthesis protein RibD [Campylobacter hominis ATCC BAA-381] Length = 362 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 57/194 (29%), Gaps = 62/194 (31%) Query: 3 KGNVFMSCALEEAQNAALRN--EIPVGAVAVLN-NKIIS-RAGNRNRELKDVTAHAEILA 58 + +M+ AL++A L VGAV + N KI+S A K AHAE+LA Sbjct: 2 QDEFYMNLALQKAWKNQLLTYPNPAVGAVVLDNAGKILSIEAH-----EKAGFAHAEVLA 56 Query: 59 IRMGCR------------------------------------------ILSQEILPEVDL 76 + + L + Sbjct: 57 VFRALENSDRNFTLKFLNSYNKNFNSNFKDTKNLATEFNANFIYDFIIKNHADKLKGGKI 116 Query: 77 YVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130 +VTLEPC CA IS + + GA + + Sbjct: 117 FVTLEPCSHLGKTPPCANLISALKFKDCVIGAKDENKIASGGAYILNKN-----GVNVKL 171 Query: 131 GISEQRSRQIIQDF 144 G+ + + +I F Sbjct: 172 GVCKNEAEILISPF 185 >gi|237651567|ref|YP_002899037.1| putative deoxycytidylate deaminase [Roseophage DSS3P2] gi|220898037|gb|ACL81295.1| putative deoxycytidylate deaminase [Silicibacter phage DSS3phi2] Length = 142 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 23/113 (20%) Query: 11 ALEEAQNAALRNEIP---VGAVAVLNNKIISR-AGN---RNRELK-----------DVTA 52 AL A+ + R+ P VGAV + +K I+ N R E K Sbjct: 9 ALGLAEAVSKRSRDPSTKVGAVIIRPDKTIASMGYNGFPRTMEDKEEWWSDRPQKYSRVI 68 Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 H E+ A+ +E + + LY T C CA I A I R+ +G S Sbjct: 69 HGEMNALLNA-----KEPVLGMTLYCTHPCCEHCAKHIIAAGITRVVFGTSEE 116 >gi|330719293|ref|ZP_08313893.1| ComE operon protein 2 [Leuconostoc fallax KCTC 3537] Length = 153 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNR-------ELKDVT--------AHAEILAIRMGCRILSQEI 70 VGA+ V N++II+ N + E+ D+ HAE A+ ++ Sbjct: 31 VGAIIVKNHRIIASGYNGSIAGTPHCTEVGDLIVDGHCVRAVHAEQNALMQAAQMGIS-- 88 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + +LYVT PC C + A I+ + + Sbjct: 89 VDGAELYVTDMPCLQCTKLLLQAGIQTIKF 118 >gi|225019182|ref|ZP_03708374.1| hypothetical protein CLOSTMETH_03134 [Clostridium methylpentosum DSM 5476] gi|224948034|gb|EEG29243.1| hypothetical protein CLOSTMETH_03134 [Clostridium methylpentosum DSM 5476] Length = 155 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 27/124 (21%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNR------------EL 47 M +M+ A + A+ + VGAV V + +++ R+ N Sbjct: 7 MNMDQEYMAQAYQYAEEHSRCLRRKVGAVLVSCDGEVL-RSTNLPVPDPQQCIQEDCLRD 65 Query: 48 KDVTA-----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96 + A HAEI + R +Y TL PC CA A+ + I Sbjct: 66 LNGIASGQHSDLCRCIHAEIDLLIQCARKGISSD--RATVYCTLSPCPNCARALLRSGIA 123 Query: 97 RLYY 100 RL + Sbjct: 124 RLVF 127 >gi|163786644|ref|ZP_02181092.1| deoxycytidylate deaminase [Flavobacteriales bacterium ALC-1] gi|159878504|gb|EDP72560.1| deoxycytidylate deaminase [Flavobacteriales bacterium ALC-1] Length = 143 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 33/138 (23%), Positives = 46/138 (33%), Gaps = 33/138 (23%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA----------- 52 ++ A E + + + + VGA+ V + IIS N T Sbjct: 10 DKAYLRIAKEWGKLSHCKRKQ-VGALIVKDRMIISDGYNGT-----PTGFENYCEDDEGY 63 Query: 53 ------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASN 104 HAE AI LY+TL PC C+ I A I R+ Y G + Sbjct: 64 TKWYVLHAEANAILKVASSTQS--CKGATLYITLSPCKECSKLIHQAGIIRVVYQNGYKD 121 Query: 105 PKGGGIENGTQFYTLATC 122 +G QF A Sbjct: 122 D------SGLQFLAKAGI 133 >gi|9631768|ref|NP_048547.1| hypothetical protein PBCV1_A200R [Paramecium bursaria Chlorella virus 1] gi|1181363|gb|AAC96568.1| contains cytidine and deoxycytidine deaminase Zn-binding region signature [Paramecium bursaria Chlorella virus 1] Length = 118 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 32/109 (29%) Query: 11 ALEEAQNAALRNEIPV--GAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRILS 67 A+E+A+ + P G V + KIIS N R+ + HAE+ A+ Sbjct: 11 AIEQAKRST----GPFKHGCVVLSGKKIISEGHNHTRKQIGTFSVHAEMDAL-------- 58 Query: 68 QEILPEVDLY----------------VTLEPCTMCAAAISLARIRRLYY 100 + + DLY PC +C AA+ ++ + Y Sbjct: 59 -WKIYDSDLYEHKKAVIVRVNDSGKLANSRPCVICMAALQQHGVKTIVY 106 >gi|291561900|emb|CBL40703.1| Deoxycytidylate deaminase [butyrate-producing bacterium SS3/4] Length = 162 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 31/123 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRN------------ 44 + FM A + +A+R++ P VGA V +NKI+S N Sbjct: 9 ITWDEYFMGVA----KLSAMRSKDPNTQVGACIVSEDNKILSMGYNGFPKGCSDDEFPWD 64 Query: 45 RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 + +D H+E+ AI L LYVTL PC CA AI A I+ Sbjct: 65 KMDEDPYNRKYFYVTHSELNAILN----YRGGSLEGSKLYVTLFPCNECAKAIIQAGIQT 120 Query: 98 LYY 100 + Y Sbjct: 121 IVY 123 >gi|68536087|ref|YP_250792.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Corynebacterium jeikeium K411] gi|68263686|emb|CAI37174.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Corynebacterium jeikeium K411] Length = 354 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 38/109 (34%), Gaps = 16/109 (14%) Query: 25 PVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 PVGAV +++ R AHAE++A+ VTLEPC Sbjct: 25 PVGAVIEDPSGQVVGRGF----TQAPGGAHAEVVALEQAGEKARGGR-----AIVTLEPC 75 Query: 84 TM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 CA A+ A IRR+ + ++P H P Sbjct: 76 NHTGRTGPCAEALIRAGIRRVDFLFADPNPIAEGGAATLRAAGVEVHGP 124 >gi|303327264|ref|ZP_07357706.1| cytidine/deoxycytidylate deaminase family protein [Desulfovibrio sp. 3_1_syn3] gi|302863252|gb|EFL86184.1| cytidine/deoxycytidylate deaminase family protein [Desulfovibrio sp. 3_1_syn3] Length = 216 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 25/104 (24%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGAVAV + +I++ N +L + HAE I Sbjct: 77 VGAVAVKDKRILATGYNGAPAGVPHCLEVGCLREQLGIPSGQRHEICRGLHAEQNVIIQA 136 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 + + +LY T PC +C+ + IRR+YY P Sbjct: 137 A--VHGINIQGAELYCTTHPCVLCSKMLINCGIRRIYYAEDYPD 178 >gi|58579260|ref|YP_197472.1| hypothetical protein ERWE_CDS_05960 [Ehrlichia ruminantium str. Welgevonden] gi|58417886|emb|CAI27090.1| Hypothetical protein ERWE_CDS_05960 [Ehrlichia ruminantium str. Welgevonden] Length = 62 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%) Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AIS ARI RLY+G N K GG+ENG + + CH PE+Y GI ++ + ++I + Sbjct: 1 MCAQAISFARIHRLYFGVYNKKYGGVENGARVF--HFCHSIPEVYGGILKEENMKLITN 57 >gi|170017672|ref|YP_001728591.1| deoxycytidylate deaminase [Leuconostoc citreum KM20] gi|169804529|gb|ACA83147.1| Deoxycytidylate deaminase [Leuconostoc citreum KM20] Length = 161 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRE-------------LKDVTA--HAEILAIRMGCRILSQEI 70 VGA+ V NN+II+ N + HAE A+ ++ Sbjct: 31 VGAIIVQNNRIIASGYNGSVSGTPHCTEVGDLMVDGHCVRAVHAEQNALMQAAQMGIS-- 88 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + + YVT PC C + A I+++ + Sbjct: 89 VSGAEFYVTDVPCIQCTKLLLQAGIKKINF 118 >gi|157311519|ref|YP_001469562.1| deoxycytidylate deaminase [Enterobacteria phage Phi1] gi|149380723|gb|ABR24728.1| Cd dCMP deaminase [Enterobacteria phage Phi1] Length = 168 Score = 61.9 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 48/141 (34%), Gaps = 43/141 (30%) Query: 5 NVFMSCALEEAQNA----ALRNEIPVGAVAVLNNKIISRAGN-----RNRELKDV----- 50 +M A A+N+ VGA+ + +IIS N + Sbjct: 4 QTYMQIAYLIAKNSKCVSWK-----VGALIEKDGRIISTGFNGTPAGQVNCSCHAHKSGW 58 Query: 51 ---------------TA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88 +A HAE+ AI R + ++ T PC CA Sbjct: 59 LDDEGKMIPEKRPEHSAWSQKNEIHAELNAILFAARSGVS--IEGASMWCTASPCPDCAK 116 Query: 89 AISLARIRRLYYGASNPKGGG 109 AI+ + I+ LYY + + GG Sbjct: 117 AIANSGIKHLYYCDTYDRNGG 137 >gi|57234807|ref|YP_181158.1| cytidine/deoxycytidylate deaminase family protein [Dehalococcoides ethenogenes 195] gi|270307783|ref|YP_003329841.1| cytidine/deoxycytidylate deaminase, Zn-binding protein [Dehalococcoides sp. VS] gi|57225255|gb|AAW40312.1| cytidine/deoxycytidylate deaminase family protein [Dehalococcoides ethenogenes 195] gi|270153675|gb|ACZ61513.1| cytidine/deoxycytidylate deaminase, Zn-binding protein [Dehalococcoides sp. VS] Length = 157 Score = 61.5 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 43/124 (34%), Gaps = 27/124 (21%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNREL 47 F+ A A+ + VGAVAV + I+S N + Sbjct: 5 NADEYFLKIAAVVAERSTCVRHH-VGAVAVKDKHILSTGYNGAPAGLTDCLELGCLRNQN 63 Query: 48 KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR- 97 + HAE I L L +Y T PC +CA ++ ARI+R Sbjct: 64 GIPSGTRHEICRAVHAEQNVIIQAA--LHGTSLEGATVYATHTPCVLCAKMLTNARIKRY 121 Query: 98 LYYG 101 + YG Sbjct: 122 VSYG 125 >gi|330991420|ref|ZP_08315371.1| Riboflavin biosynthesis protein ribD [Gluconacetobacter sp. SXCC-1] gi|329761439|gb|EGG77932.1| Riboflavin biosynthesis protein ribD [Gluconacetobacter sp. SXCC-1] Length = 339 Score = 61.5 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 15/119 (12%) Query: 9 SCALEEAQN--AALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 A++EA PVG + + I++ G+ T HAEI AI CR Sbjct: 15 RAAVDEAARHVGVTAPNPPVGCALLDRDGTILAVGGHHRA----GTPHAEIQAINQ-CRA 69 Query: 66 LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 VTLEPC C+ A++ +R ++ G +P G + Sbjct: 70 RGLLD-RAHTAVVTLEPCNHTGRTGPCSHALAATPVRDVWIGLRDPNPHVAGGGAGYLR 127 >gi|325118493|emb|CBZ54045.1| hypothetical protein NCLIV_038260 [Neospora caninum Liverpool] Length = 487 Score = 61.5 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 44/139 (31%), Gaps = 34/139 (24%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNREL------------KD 49 FM + + R VGA+ N++I+ N D Sbjct: 331 DTYFMRLTFLASTRSNCMKRR---VGAIVARGNRVIATGYNGTPSQAANCNAGGCARCND 387 Query: 50 V------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 HAE A+ R + LYVT PC CA + + I+ Sbjct: 388 PNVSQGRALEACECIHAEANALLEAGR----DRAMNGTLYVTCLPCLGCAKLVVQSAIQT 443 Query: 98 LYYG-ASNPKGGGIENGTQ 115 + Y + + G ++ T+ Sbjct: 444 VVYAEEYDNRSGALDLLTR 462 >gi|50549399|ref|XP_502170.1| YALI0C23210p [Yarrowia lipolytica] gi|49648037|emb|CAG82490.1| YALI0C23210p [Yarrowia lipolytica] Length = 310 Score = 61.5 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 39/122 (31%), Gaps = 32/122 (26%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50 FM A A+ + R VG V V ++++I N E Sbjct: 163 DAYFMRLADLAAERSNCMKRQ---VGCVIVRDSRVICTGYNGTPRGAVNCNEGGCARCNS 219 Query: 51 -----------TAHAEILAIRMGCRILSQEILPEVD-LYVTLEPCTMCAAAISLARIRRL 98 HAE A+ R E + + LY PC C+ I A I+ + Sbjct: 220 GEAGAALSTCLCLHAEENALLEAGR----ERIRDTSKLYCNTCPCLTCSIKIVQAGIKEV 275 Query: 99 YY 100 Y Sbjct: 276 IY 277 >gi|269216184|ref|ZP_06160038.1| cytidine/deoxycytidylate deaminase family protein [Slackia exigua ATCC 700122] gi|269130443|gb|EEZ61521.1| cytidine/deoxycytidylate deaminase family protein [Slackia exigua ATCC 700122] Length = 139 Score = 61.5 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 41/122 (33%), Gaps = 26/122 (21%) Query: 8 MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKDVTA- 52 M A E + A VGA+ V + +I++ N L + Sbjct: 1 MHLAFEVSGRATCLR-RAVGALLVKDRRILATGYNGVPTGLRHCEEVGCLRERLGVPSGQ 59 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 HAE AI R + +Y+T +PC++C I A I + Y Sbjct: 60 RHEICRGLHAEQNAIIQAARHGIN--IQGSSIYITTQPCSVCTKMIINAGIGEIVYAEGY 117 Query: 105 PK 106 P Sbjct: 118 PD 119 >gi|238695103|ref|YP_002922297.1| dCMP deaminase [Enterobacteria phage JSE] gi|220029239|gb|ACL78174.1| dCMP deaminase [Enterobacteria phage JSE] Length = 168 Score = 61.5 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 48/141 (34%), Gaps = 43/141 (30%) Query: 5 NVFMSCALEEAQNA----ALRNEIPVGAVAVLNNKIISRAGN-----RNRELKDV----- 50 +M A A+N+ VGA+ + +IIS N + Sbjct: 4 QTYMQIAYLIAKNSKCVSWK-----VGALIEKDGRIISTGFNGTPAGQVNCSCHAHKNGW 58 Query: 51 ---------------TA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88 +A HAE+ AI R + ++ T PC CA Sbjct: 59 LDDDGKMIPEKRPEHSAWSQKNEIHAELNAILFAARSGVS--IEGASMWCTASPCPDCAK 116 Query: 89 AISLARIRRLYYGASNPKGGG 109 AI+ + I+ LYY + + GG Sbjct: 117 AIANSGIKHLYYCDTYDRNGG 137 >gi|134057563|emb|CAK48917.1| unnamed protein product [Aspergillus niger] Length = 338 Score = 61.5 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 36/122 (29%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50 FM A AQ + R VG V V + ++IS N E Sbjct: 194 DQYFMELASLAAQRSNCMKRR---VGCVLVRDRRVISTGYNGTPRHIRNCNEGGCPRCNR 250 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE A+ R +E LY PC C I+ I + Sbjct: 251 GEGGGVGLSTCLCLHAEENALLEAGRERIRE---GAILYCDTCPCLTCTVKITQVGITEV 307 Query: 99 YY 100 Y Sbjct: 308 VY 309 >gi|115398407|ref|XP_001214795.1| deoxycytidylate deaminase [Aspergillus terreus NIH2624] gi|114192986|gb|EAU34686.1| deoxycytidylate deaminase [Aspergillus terreus NIH2624] Length = 259 Score = 61.5 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 39/122 (31%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50 FM A A + R VG V V ++++IS N R LK+ Sbjct: 83 DQYFMQLASLAALRSNCMKRR---VGCVLVRDHRVISTGYNGTPRHLKNCNEGGCPRCNR 139 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE A+ R +E LY PC C I+ I + Sbjct: 140 GEGGGVGLSTCLCLHAEENALLEAGRERIRE---GAILYCDTCPCLTCTVKIAQVGISEV 196 Query: 99 YY 100 Y Sbjct: 197 VY 198 >gi|77917925|ref|YP_355740.1| putative cytosine/adenosine deaminase [Pelobacter carbinolicus DSM 2380] gi|77544008|gb|ABA87570.1| putative cytosine/adenosine deaminase [Pelobacter carbinolicus DSM 2380] Length = 221 Score = 61.5 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 44/141 (31%), Gaps = 20/141 (14%) Query: 13 EEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRE---LKDVTAHAEILAIRM------ 61 ++A + +GA V K++ R NR D HAE+ + Sbjct: 62 KQAIVSLKAGSGGIGACLVDARTGKVVERGRNRQYSPYFRSD--MHAEMDLLNRYEDRLK 119 Query: 62 ---GCRILSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117 G ++ L+ + EPC MC I + I+R+YY + +GG Sbjct: 120 KKGGSNSSGDPRQCGDLILFTSTEPCPMCLTRIINSGIQRMYYLNPDMEGGMAHRMEHL- 178 Query: 118 TLATCHHSPEIYPGISEQRSR 138 + Sbjct: 179 --PKFWREFAAGRDFRQAECS 197 >gi|261187467|ref|XP_002620157.1| deoxycytidylate deaminase [Ajellomyces dermatitidis SLH14081] gi|239594207|gb|EEQ76788.1| deoxycytidylate deaminase [Ajellomyces dermatitidis SLH14081] gi|327356490|gb|EGE85347.1| deoxycytidylate deaminase [Ajellomyces dermatitidis ATCC 18188] Length = 356 Score = 61.5 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 37/122 (30%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50 FM A AQ + R VG V V +++S N R K+ Sbjct: 187 DQYFMQLASLAAQRSNCMKRR---VGCVLVRGKRVMSTGYNGTPRNTKNCNEGGCPRCNS 243 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE A+ R E LY PC C+ I+ I + Sbjct: 244 GEGGGAALSTCLCIHAEENALLEAGRERIGE---GAILYCNTCPCLTCSVKIAQLGISEV 300 Query: 99 YY 100 Y Sbjct: 301 VY 302 >gi|224136175|ref|XP_002322258.1| predicted protein [Populus trichocarpa] gi|222869254|gb|EEF06385.1| predicted protein [Populus trichocarpa] Length = 229 Score = 61.5 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 42/125 (33%), Gaps = 33/125 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42 + + FM+ A A+ + P VGA V N II N Sbjct: 69 LSWDDYFMAIAFLSAERSKD----PNRQVGACLVSQNGIILGIGYNGFPRGCSDDKLPWA 124 Query: 43 RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 + + D HAE+ AI + LYVT+ PC CA I + + Sbjct: 125 KKSKSGDPLETKYPYVCHAEVNAILNTNHASA----AGQKLYVTMFPCNECAKIIIQSGV 180 Query: 96 RRLYY 100 + Y Sbjct: 181 SEVIY 185 >gi|118483842|gb|ABK93812.1| unknown [Populus trichocarpa] Length = 229 Score = 61.5 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 42/125 (33%), Gaps = 33/125 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42 + + FM+ A A+ + P VGA V N II N Sbjct: 69 LSWDDYFMAIAFLSAERSKD----PNRQVGACLVSQNGIILGIGYNGFPRGCSDDKLPWA 124 Query: 43 RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 + + D HAE+ AI + LYVT+ PC CA I + + Sbjct: 125 KKSKSGDPLETKYPYVCHAEVNAILNTNHASA----AGQKLYVTMFPCNECAKIIIQSGV 180 Query: 96 RRLYY 100 + Y Sbjct: 181 SEVIY 185 >gi|239609238|gb|EEQ86225.1| deoxycytidylate deaminase [Ajellomyces dermatitidis ER-3] Length = 356 Score = 61.5 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 37/122 (30%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50 FM A AQ + R VG V V +++S N R K+ Sbjct: 187 DQYFMQLASLAAQRSNCMKRR---VGCVLVRGKRVMSTGYNGTPRNTKNCNEGGCPRCNS 243 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE A+ R E LY PC C+ I+ I + Sbjct: 244 GEGGGAALSTCLCIHAEENALLEAGRERIGE---GAILYCNTCPCLTCSVKIAQLGISEV 300 Query: 99 YY 100 Y Sbjct: 301 VY 302 >gi|58617314|ref|YP_196513.1| hypothetical protein ERGA_CDS_05870 [Ehrlichia ruminantium str. Gardel] gi|58416926|emb|CAI28039.1| Hypothetical protein ERGA_CDS_05870 [Ehrlichia ruminantium str. Gardel] Length = 62 Score = 61.5 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 2/59 (3%) Query: 85 MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143 MCA AIS RI RLY+G N K GG+ENG + + CH PE+Y GI E+ + ++I + Sbjct: 1 MCAQAISFTRIHRLYFGVYNKKYGGVENGARVF--HFCHSIPEVYGGILEEENMKLITN 57 >gi|310722526|ref|YP_003969349.1| Cd dCMP deaminase [Aeromonas phage phiAS5] gi|306021369|gb|ADM79903.1| Cd dCMP deaminase [Aeromonas phage phiAS5] Length = 182 Score = 61.5 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 38/115 (33%), Gaps = 42/115 (36%) Query: 26 VGAVAVLNNKIISRAGNRNRELK----------------DVTA----------------- 52 VGA+ +++ IS N + DV Sbjct: 24 VGAIIAKDDRPISSGYNGTVSDQPNCDEVALDNGWAEYVDVPGVGKELRLREDKSDDYSA 83 Query: 53 -------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE+ AI R + + +Y T+ PC CA I+ +RIR L Y Sbjct: 84 WAKSNVIHAEMNAILFAAR--GGKSIEGATMYCTMAPCPDCAKMIAQSRIRTLVY 136 >gi|291336300|gb|ADD95862.1| hypothetical protein [uncultured organism MedDCM-OCT-S12-C54] Length = 212 Score = 61.5 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 40/138 (28%), Gaps = 21/138 (15%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV---------LNNKIISRAGNRNRELKDVT--- 51 +M A +Q++ VG V +I N L Sbjct: 35 DENYMDLAFLLSQSSTATGR--VGCAIVSGVRDGAAKDQGSVIVCGVNS--GLYSPLKAD 90 Query: 52 AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111 HAE AI S L YV+ PC C + ++++ I R+ G + Sbjct: 91 CHAEANAI--AESAASGWPLRGATCYVSKPPCNHCFSLLAVSGIARIVSAGP---FGAVG 145 Query: 112 NGTQFYTLATCHHSPEIY 129 + Q + Sbjct: 146 SVKQELVAQQLGIECSVV 163 >gi|282883351|ref|ZP_06291944.1| ComE operon protein 2 [Peptoniphilus lacrimalis 315-B] gi|300813982|ref|ZP_07094275.1| putative ComE operon protein 2 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|281296762|gb|EFA89265.1| ComE operon protein 2 [Peptoniphilus lacrimalis 315-B] gi|300511876|gb|EFK39083.1| putative ComE operon protein 2 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 139 Score = 61.5 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 44/118 (37%), Gaps = 21/118 (17%) Query: 1 MKK--GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRN-----------RE 46 M+K FM AQ + VG V V +++I+S N Sbjct: 1 MRKSWDEYFMEITQLVAQRSTCDRAF-VGCVLVNSDHRIVSTGYNGTASGNPHCIDVGHR 59 Query: 47 LKD----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 ++D T HAE+ A+ + C YVT PC C A+ A I +YY Sbjct: 60 MRDGHCIATIHAEMNAL-LYCAKEGIPA-KGSICYVTHFPCLNCTKALIQAGISAIYY 115 >gi|89890037|ref|ZP_01201548.1| deoxycytidylate deaminase [Flavobacteria bacterium BBFL7] gi|89518310|gb|EAS20966.1| deoxycytidylate deaminase [Flavobacteria bacterium BBFL7] Length = 141 Score = 61.5 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 34/147 (23%), Positives = 51/147 (34%), Gaps = 37/147 (25%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA--------- 52 K ++ A E A+ + VGA+ V + IIS N + Sbjct: 8 KYDIAYLKMAAEWAKLSHCNR-RQVGALIVRDRMIISDGYNGT-----PSGFENFCEDEE 61 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GA 102 HAE AI S + LY+T+ PC C+ I + I+R+ Y G Sbjct: 62 GYTKWYVLHAEANAILKVA--GSTQSCAGATLYITMSPCKDCSKLIHQSGIKRVVYVEGY 119 Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIY 129 + +G QF A E+ Sbjct: 120 KDD------SGLQFLQKAG----VEVE 136 >gi|320591187|gb|EFX03626.1| deoxycytidylate deaminase [Grosmannia clavigera kw1407] Length = 387 Score = 61.5 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 40/123 (32%), Gaps = 29/123 (23%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50 FMS A AQ + R VG V V ++++S N R L++ Sbjct: 229 DRYFMSLASLAAQRSNCMKRR---VGCVLVREHRVVSTGYNGTPRGLRNCGEGGCGRCNG 285 Query: 51 ------------TAHAEILAIRMGCR-ILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 HAE A+ R + L LY PC C+ I I Sbjct: 286 GFGAGLSLATCLCLHAEENALLEAGRERIPTASLANTILYCDTCPCLTCSIKIVQVGIGE 345 Query: 98 LYY 100 + Y Sbjct: 346 VVY 348 >gi|225155324|ref|ZP_03723817.1| CMP/dCMP deaminase zinc-binding [Opitutaceae bacterium TAV2] gi|224803931|gb|EEG22161.1| CMP/dCMP deaminase zinc-binding [Opitutaceae bacterium TAV2] Length = 163 Score = 61.1 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 18/112 (16%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAV----LNNKIISRAGN----------RNRELK- 48 + FM+ A+ + + VG V V N++++ N R R+ Sbjct: 28 DDYFMATAVLLSTRSPCERLH-VGCVLVSGGARPNRLVAAGYNGYLPGTPHVSRVRDGHE 86 Query: 49 DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T HAE A+ R S L YVT PC CA ++ A I + + Sbjct: 87 QATVHAEQNAVADAARRGSS--LEGCVAYVTHFPCINCAKILAAAGIAEIRF 136 >gi|32266337|ref|NP_860369.1| riboflavin biosynthesis protein RibD [Helicobacter hepaticus ATCC 51449] gi|32262387|gb|AAP77435.1| riboflavin biosynthesis protein RibD [Helicobacter hepaticus ATCC 51449] Length = 348 Score = 61.1 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 34/127 (26%) Query: 26 VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-------------- 70 VGA+ V +I+S+A ++ + HAE+LAI+ LS + Sbjct: 31 VGALVVDKYGQILSQAVHKVA----GSPHAEVLAIQAAYHTLSGDDEIVKLHKSKDIHTY 86 Query: 71 --------LPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 E LYV+LEPC C+ +S R+ ++ G + Sbjct: 87 LLAHHNGLFKECTLYVSLEPCNHYGKTPPCSQLLSSLGFSRVCIATNDTHALAAG-GANY 145 Query: 117 YTLATCH 123 + + Sbjct: 146 LSQVGIN 152 >gi|327198164|ref|YP_004306740.1| putative dCMP deaminase [Pseudomonas phage KPP10] gi|297591690|dbj|BAJ09110.1| putative dCMP deaminase [Pseudomonas phage KPP10] Length = 129 Score = 61.1 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 14/87 (16%) Query: 26 VGAVAVLNNKIISRAGN-----------RNRELKDV-TAHAEILAIRMGCRILSQEILPE 73 VGAV V NKIIS+ N + HAE A+ SQE Sbjct: 18 VGAVIVQGNKIISQGYNGLPGGLEGPLENEEGVTRPEVRHAEKNAL--LWLSCSQESAQG 75 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 ++ T+ PC CA I A I+R+YY Sbjct: 76 AWMFATMSPCEYCAHDIVDAGIKRVYY 102 >gi|213408261|ref|XP_002174901.1| deoxycytidylate deaminase [Schizosaccharomyces japonicus yFS275] gi|212002948|gb|EEB08608.1| deoxycytidylate deaminase [Schizosaccharomyces japonicus yFS275] Length = 320 Score = 61.1 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 40/123 (32%), Gaps = 27/123 (21%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-RELKD-----VTA----- 52 FM A A + + VG V V + ++I+ N R L++ T Sbjct: 173 DAYFMQLA-SLASMRSNCMKRRVGCVLVRDQRVIATGYNGTPRGLRNCNEGGCTRCNSAA 231 Query: 53 ------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE A+ R + LY PC C+ I+ I + Y Sbjct: 232 KSGIGLGTCLCLHAEENALLEAGRERIGDR---GILYCNTCPCLTCSVKIAQVGISEVVY 288 Query: 101 GAS 103 S Sbjct: 289 STS 291 >gi|116180106|ref|XP_001219902.1| hypothetical protein CHGG_00681 [Chaetomium globosum CBS 148.51] gi|88184978|gb|EAQ92446.1| hypothetical protein CHGG_00681 [Chaetomium globosum CBS 148.51] Length = 393 Score = 61.1 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 40/124 (32%), Gaps = 34/124 (27%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50 FMS A AQ + R VG V V + ++IS N R L++ Sbjct: 239 DAYFMSLASLAAQRSNCMKRR---VGCVVVRDKRVISTGYNGTPRGLRNCGEGGCARCNA 295 Query: 51 -------------TAHAEILAIRMGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIR 96 HAE A+ R E L LY PC C+ I + Sbjct: 296 GEGGSGHGLATCLCIHAEENALLEAGR----ERLRDGAVLYCDTCPCLTCSIKIVQVGVG 351 Query: 97 RLYY 100 + Y Sbjct: 352 EVVY 355 >gi|161622500|ref|YP_001595339.1| Cd dCMP deaminase [Enterobacteria phage JS98] gi|238695364|ref|YP_002922557.1| Cd dCMP deaminase [Enterobacteria phage JS10] gi|160213806|gb|ABX11145.1| Cd dCMP deaminase [Enterobacteria phage JS98] gi|220029500|gb|ACL78434.1| Cd dCMP deaminase [Enterobacteria phage JS10] Length = 181 Score = 61.1 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 40/117 (34%), Gaps = 43/117 (36%) Query: 26 VGAVAVLNNKIISRAGN----------RNRELKDVTA----------------------- 52 VGAV N +IIS N + +D T Sbjct: 24 VGAVIEKNGRIISTGYNGSPSGGVNCCDHAVEQDWTRVVYDTARMSHKSILLKEHRMAHA 83 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 HAE+ AI R S + +YVTL PC CA +I+ + I+ L Y Sbjct: 84 AWSSKNEIHAELNAILFAARTGSS--IDGATMYVTLSPCADCAKSIAQSGIKTLVYA 138 >gi|51245792|ref|YP_065676.1| hypothetical protein DP1940 [Desulfotalea psychrophila LSv54] gi|50876829|emb|CAG36669.1| hypothetical protein DP1940 [Desulfotalea psychrophila LSv54] Length = 164 Score = 61.1 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 8/106 (7%) Query: 8 MSCALEEAQNA-ALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M+ +E ++ P A + +++ NR L +AHAE++AI + + Sbjct: 1 MAAVIEFSRQNIRQETGGPFAAGIFEKESGRLVMLGVNRVMPLNCSSAHAEVMAISLAQQ 60 Query: 65 ILSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 L L PE +L V PC MC A+ + R L S P Sbjct: 61 KLENFDLGAPGMPEHELVVNWRPCIMCLGALMWSGARHLTIAGSGP 106 >gi|255711598|ref|XP_002552082.1| KLTH0B06776p [Lachancea thermotolerans] gi|238933460|emb|CAR21644.1| KLTH0B06776p [Lachancea thermotolerans] Length = 335 Score = 61.1 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 35/119 (29%), Gaps = 28/119 (23%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRE--------------L 47 FM A A + R VG V V + ++I+ N Sbjct: 188 DTYFMKLATLAASRSNCMKRR---VGCVIVRDCRVIATGYNGTPRHLVNCHSGGCPRCNN 244 Query: 48 KDV------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D HAE A+ R P LY PC C+ I IR + Y Sbjct: 245 GDAQLHACLCLHAEENALLEAGRDRVG---PNAILYCDTCPCLTCSVKIVQTGIREVVY 300 >gi|332519190|ref|ZP_08395657.1| CMP/dCMP deaminase, zinc-binding [Lacinutrix algicola 5H-3-7-4] gi|332045038|gb|EGI81231.1| CMP/dCMP deaminase, zinc-binding [Lacinutrix algicola 5H-3-7-4] Length = 143 Score = 61.1 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 48/135 (35%), Gaps = 23/135 (17%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50 K ++ A E + + + + VGA+ V + IIS N ++ Sbjct: 8 KYDKAYLRIAQEWGKLSHCKRKQ-VGALIVKDRMIISDGFNGTPTGFENPCEDEEGYTKW 66 Query: 51 -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKG 107 HAE AI LY+TL PC C+ I A I R+ Y G + Sbjct: 67 YVLHAEANAILKVASSTQS--CNGATLYITLSPCKECSKLIHQAGIIRVVYKEGYKDD-- 122 Query: 108 GGIENGTQFYTLATC 122 +G +F A Sbjct: 123 ----SGLRFLEKAGI 133 >gi|220904883|ref|YP_002480195.1| CMP/dCMP deaminase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869182|gb|ACL49517.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 158 Score = 61.1 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 37/104 (35%), Gaps = 25/104 (24%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGAVAV + +I++ N ++ + HAE I Sbjct: 28 VGAVAVKDKRILATGYNGAPAGVPHCLEVGCLREQMGIPSGQRHEICRGLHAEQNVIIQA 87 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106 + + +LY T PC C+ + IRR+YY P Sbjct: 88 A--VHGINISGAELYCTTHPCVQCSKMLINCGIRRIYYAEHYPD 129 >gi|220918025|ref|YP_002493329.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter dehalogenans 2CP-1] gi|219955879|gb|ACL66263.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter dehalogenans 2CP-1] Length = 392 Score = 61.1 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 57/149 (38%), Gaps = 21/149 (14%) Query: 5 NVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62 FM A+ EA R VGAV V + +++ R + HAE++ Sbjct: 26 ERFMRLAVREAARGLGRTSPNPAVGAVVVRDGRVVGRGHHARAGG----PHAEVV----- 76 Query: 63 CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + + D+Y TLEPC C+ A+ A +RR++ G+S+P G Sbjct: 77 ALRAAGALARGADVYTTLEPCDHFGKTPPCSVALLEAGVRRVFVGSSDPNPLVNGRGMAR 136 Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145 H + G+ ++ +F Sbjct: 137 LR----RHGVAVVKGVLRDACDRLNAPWF 161 >gi|168495122|ref|YP_001686860.1| dCMP deaminase [Azospirillum phage Cd] gi|46241683|gb|AAS83068.1| dCMP deaminase-like protein [Azospirillum brasilense] gi|168148881|emb|CAO99345.1| dCMP deaminase [Azospirillum phage Cd] Length = 167 Score = 61.1 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 41/114 (35%), Gaps = 23/114 (20%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGNRNRELKDV--------- 50 FM+ A +A + P VGAV V +I + NR +D Sbjct: 27 DQRFMTYARHQAAKSKD----PCKQVGAVVVGPLGEIRAIGHNRLPGDRDCPDTYADKRR 82 Query: 51 ----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE++AI R L L+VT C CA + A I + + Sbjct: 83 KRERIVHAEVVAITSAARAGVA--LDGGTLFVTHPCCADCARMLVEAGIVEVVW 134 >gi|145603432|ref|XP_001404560.1| hypothetical protein MGG_13228 [Magnaporthe oryzae 70-15] gi|145011664|gb|EDJ96320.1| hypothetical protein MGG_13228 [Magnaporthe oryzae 70-15] Length = 180 Score = 61.1 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 35/95 (36%), Gaps = 14/95 (14%) Query: 3 KGNVFMSCALEEAQNAA-LRNEIPVGAVAV--LNNKIISRAGNRNRELK----DVTAHAE 55 FM A+EEA+ + + VGAV V ++SR + + HAE Sbjct: 14 NHEEFMKLAIEEARRSRPDPGKFCVGAVLVNEDTGDVLSRGYYLEYPEDYNGSNGSVHAE 73 Query: 56 ILAIRMGCRILSQEIL-------PEVDLYVTLEPC 83 + + + P +Y T+EPC Sbjct: 74 RVCLIKAAELYGVSETELGAALPPNCAIYTTMEPC 108 >gi|86159164|ref|YP_465949.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Anaeromyxobacter dehalogenans 2CP-C] gi|85775675|gb|ABC82512.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Anaeromyxobacter dehalogenans 2CP-C] Length = 392 Score = 61.1 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 59/154 (38%), Gaps = 24/154 (15%) Query: 7 FMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 FM AL EA R VGAV V + +++ R + HAE++ Sbjct: 28 FMRLALREAARGLGRTSPNPAVGAVVVRDGRVVGRGHHARAGG----PHAEVV-----AL 78 Query: 65 ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 + + D+Y TLEPC C+ A+ A +RR++ G+S+P G Sbjct: 79 RAAGALARGADVYTTLEPCDHFGKTPPCSVALLEAGVRRVFVGSSDPNPLVNGRGMARLR 138 Query: 119 LATCHHSPEIYPGISEQRSRQIIQ---DFFKERR 149 + + G+ ++ F ERR Sbjct: 139 RSG----VAVVKGVLRDDCDRLNAPWFTFITERR 168 >gi|326804375|ref|YP_004327179.1| hypothetical protein PsPhPAKP1_gp034 [Pseudomonas phage PAK_P1] gi|290873788|gb|ADD64991.1| hypothetical protein ORF_0034 [Pseudomonas phage PAK_P1] gi|294998930|gb|ADF58244.1| putative dCMP deaminase [Pseudomonas phage JG004] Length = 138 Score = 61.1 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Query: 26 VGAVAVLNNKIISRAGN-RNRELKDVT-----------AHAEILAIRMGCRILSQEILPE 73 VGAV V N+IIS N L HAE A+R R S E Sbjct: 27 VGAVLVKRNRIISCGYNALPEHLNGPLEDETGVTKAEVRHAEENALRALIR--SPESAQG 84 Query: 74 VDLYVTLEPCTMCAAAISLARIRRLYY 100 L+VT C CA ++ A I+ +YY Sbjct: 85 ATLFVTHSCCKNCAISVVEAGIKVVYY 111 >gi|224011555|ref|XP_002295552.1| dCMP deaminase [Thalassiosira pseudonana CCMP1335] gi|209583583|gb|ACI64269.1| dCMP deaminase [Thalassiosira pseudonana CCMP1335] Length = 176 Score = 61.1 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 43/120 (35%), Gaps = 25/120 (20%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGN-------------RNRE 46 + + FM+ + AQ + N VGA V NK II N Sbjct: 21 LSWDDYFMAVSFLSAQRSKDPN-TQVGACIVDTNKSIIGIGYNGFPRGCSDEHLPWARHA 79 Query: 47 LKDV------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D+ HAE+ AI C + +YV L PC C+ I + IR + Y Sbjct: 80 SCDLHKKYPYVVHAEVNAILNKCSA----SVRGATIYVALFPCNECSKVIIQSGIREVVY 135 >gi|23099435|ref|NP_692901.1| late competence protein [Oceanobacillus iheyensis HTE831] gi|22777664|dbj|BAC13936.1| late competence protein (DNA binding and uptake) [Oceanobacillus iheyensis HTE831] Length = 186 Score = 61.1 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 17/91 (18%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-----------DV----TAHAEILAIRMGCRILSQEI 70 VGA V + +II+ N + D T HAE A+ + Sbjct: 28 VGATIVRDKRIIAGGYNGSVTGSVHCTDEGCYVIDGHCVRTVHAEANALLQCAKFGVPT- 86 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 D+YVT PC C + + IR +YY Sbjct: 87 -EGADVYVTHFPCLQCTKQLIQSGIRTVYYA 116 >gi|297819466|ref|XP_002877616.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis lyrata subsp. lyrata] gi|297323454|gb|EFH53875.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis lyrata subsp. lyrata] Length = 232 Score = 60.7 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 41/125 (32%), Gaps = 33/125 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42 + + FM+ A A+ + P VGA V N +I N Sbjct: 66 LSWDDYFMAIAFLSAERSKD----PNRQVGACLVSQNGVILGIGYNGFPRGCSDDKLPWA 121 Query: 43 RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 + D HAE+ AI + LYVT+ PC CA I + + Sbjct: 122 KKSRTGDPLETKYPYVCHAEVNAILNTNHASA----AGQKLYVTMFPCNECAKIILQSGV 177 Query: 96 RRLYY 100 + Y Sbjct: 178 AEVIY 182 >gi|116831274|gb|ABK28591.1| unknown [Arabidopsis thaliana] Length = 233 Score = 60.7 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 41/125 (32%), Gaps = 33/125 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42 + + FM+ A A+ + P VGA V N +I N Sbjct: 66 LSWDDYFMAIAFLSAERSKD----PNRQVGACLVSQNGVILGIGYNGFPRGCSDDKLPWA 121 Query: 43 RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 + D HAE+ AI + LYVT+ PC CA I + + Sbjct: 122 KKSRTGDPLETKYPYVCHAEVNAILNTNHASA----AGQKLYVTMFPCNECAKIILQSGV 177 Query: 96 RRLYY 100 + Y Sbjct: 178 AEVIY 182 >gi|42565719|ref|NP_190423.2| cytidine/deoxycytidylate deaminase family protein [Arabidopsis thaliana] gi|91806546|gb|ABE66000.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis thaliana] gi|332644907|gb|AEE78428.1| dCMP deaminase [Arabidopsis thaliana] Length = 232 Score = 60.7 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 41/125 (32%), Gaps = 33/125 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42 + + FM+ A A+ + P VGA V N +I N Sbjct: 66 LSWDDYFMAIAFLSAERSKD----PNRQVGACLVSQNGVILGIGYNGFPRGCSDDKLPWA 121 Query: 43 RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 + D HAE+ AI + LYVT+ PC CA I + + Sbjct: 122 KKSRTGDPLETKYPYVCHAEVNAILNTNHASA----AGQKLYVTMFPCNECAKIILQSGV 177 Query: 96 RRLYY 100 + Y Sbjct: 178 AEVIY 182 >gi|291513963|emb|CBK63173.1| Pyrimidine reductase, riboflavin biosynthesis [Alistipes shahii WAL 8301] Length = 359 Score = 60.7 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 25/148 (16%) Query: 2 KKGNVFMSCALEEAQNAALRNEIP------VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55 + +++ A+ E +P VGAV L + R+ T HAE Sbjct: 215 DEDLRYLTQAVAEGLRC-----VPSRTSYCVGAVVALPD---GRSFTGYTHETSPTHHAE 266 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPKGG 108 AIR + + L +Y ++EPC+ C I R+ + P Sbjct: 267 QEAIRKA--LDAGAELRGAAIYSSMEPCSQRKSEPESCTQLILRHGFARVVFALYEPDRF 324 Query: 109 GIENGTQFYTLATCHHS--PEIYPGISE 134 G Q A PE+ G+ Sbjct: 325 VRCRGAQTLREAGVDVRVYPELAEGVRR 352 >gi|331002521|ref|ZP_08326039.1| hypothetical protein HMPREF0491_00901 [Lachnospiraceae oral taxon 107 str. F0167] gi|330410337|gb|EGG89771.1| hypothetical protein HMPREF0491_00901 [Lachnospiraceae oral taxon 107 str. F0167] Length = 164 Score = 60.7 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 49/131 (37%), Gaps = 35/131 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + F+ A A+ + P VGA V +NKI+S N Sbjct: 9 INWDEYFIGVAKLSARRSKD----PSTQVGACIVSEDNKILSMGYNGFPRGCSDEDFPWG 64 Query: 43 RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 + E+ D + H+E+ AI L +YVTL PC CA AI A I Sbjct: 65 KEYEITDPYNAKYLYSTHSELNAILN----YRGGSLEGSKIYVTLFPCNECAKAIIQAGI 120 Query: 96 RRLYYGASNPK 106 + + Y + K Sbjct: 121 KTIIY--EDDK 129 >gi|325678499|ref|ZP_08158114.1| cytidine and deoxycytidylate deaminase zinc-binding region [Ruminococcus albus 8] gi|324109810|gb|EGC04011.1| cytidine and deoxycytidylate deaminase zinc-binding region [Ruminococcus albus 8] Length = 248 Score = 60.7 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 31/125 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGNR----NRELKDV-- 50 + + F+ A + +A R++ P VGA V NKI+S N + + Sbjct: 8 ISWDDYFLGIA----ELSAARSKDPNTQVGACIVSEENKILSLGYNGMPAGCNDDEMPWG 63 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ A+ + S L +YV+L PC CA AI + I+ + Sbjct: 64 REGDFLDTKYPFVCHAELNAV-----LNSNHDLKGSRIYVSLFPCNECAKAIIQSGIKEV 118 Query: 99 YYGAS 103 Y Sbjct: 119 IYTCD 123 >gi|332376376|gb|AEE63328.1| unknown [Dendroctonus ponderosae] Length = 222 Score = 60.7 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 35/121 (28%) Query: 5 NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRNRELKDVTA-------- 52 + FM+ A A+ + P VGA V +N I+ N K+ + Sbjct: 22 DYFMATAFLAAKRSKD----PCSQVGACIVNEDNVIVGIGYNG--MPKNCSDDEFPWSKG 75 Query: 53 -------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 HAE+ AI + + +YV L PC CA I + ++++ Sbjct: 76 SKSDLDNKYLYVCHAELNAILN----KNSVDVRNCTMYVGLFPCNECAKVIIQSGVKQII 131 Query: 100 Y 100 Y Sbjct: 132 Y 132 >gi|119480441|ref|XP_001260249.1| deoxycytidylate deaminase [Neosartorya fischeri NRRL 181] gi|119408403|gb|EAW18352.1| deoxycytidylate deaminase [Neosartorya fischeri NRRL 181] Length = 362 Score = 60.7 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 35/122 (28%), Gaps = 31/122 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50 FM A AQ + R VG V V ++IS N E Sbjct: 190 DLYFMQLASLAAQRSNCMKRR---VGCVLVRERRVISTGYNGTPRHLTNCNEGGCPRCNR 246 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE A+ R +E LY PC C I+ I + Sbjct: 247 GEGGGVGLSTCLCLHAEENALLEAGRERIRE---GSILYCDTCPCLTCTVKIAQVGISEV 303 Query: 99 YY 100 Y Sbjct: 304 VY 305 >gi|149921258|ref|ZP_01909714.1| riboflavin-specific deaminase (diaminohydroxyphosphoribosylaminopyrimidine deaminase [Plesiocystis pacifica SIR-1] gi|149817918|gb|EDM77380.1| riboflavin-specific deaminase (diaminohydroxyphosphoribosylaminopyrimidine deaminase [Plesiocystis pacifica SIR-1] Length = 366 Score = 60.7 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 40/146 (27%), Positives = 56/146 (38%), Gaps = 27/146 (18%) Query: 6 VFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTA--HAEILAIR 60 +M AL A++ P VGAV V ++ R DVT HAE+ A+R Sbjct: 10 HWMGHALRLAKSGTGAT-YPNPCVGAVLVKKGVVVGRGR------SDVTGGPHAEVRALR 62 Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114 +YVTLEPC C AI A +RR+ G +P G Sbjct: 63 QAGAAARGAA-----MYVTLEPCSHRGRTPPCVDAIIEAGVRRVCIGVEDPAPHVGGKGI 117 Query: 115 QFYTLATCHHSPEIYPGISEQRSRQI 140 + A E+ G+ ++R I Sbjct: 118 RKLRRAGL----EVEVGVCGDQARSI 139 >gi|322712548|gb|EFZ04121.1| nucleoside deaminase [Metarhizium anisopliae ARSEF 23] Length = 254 Score = 60.7 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 47/142 (33%), Gaps = 41/142 (28%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-----NKIISRAGNRNRELKDVTA 52 ++ + +M A A N P G V V + +++ N E + T Sbjct: 21 IETRHYWMRRA-NAALFEVTGNPCPTEAFGTVIVNHTAGGLGELVCVGAND-IESGNPTL 78 Query: 53 HA------------------EILAIRMGCRILSQEI-------------LPEVDLYVTLE 81 H E AI+ IL+ ++ LY E Sbjct: 79 HGNSPLPMKNKNVANHRESGETAAIKNCTAILTDPHGPYKLSGHEALNAWADLTLYTNAE 138 Query: 82 PCTMCAAAISLARIRRLYYGAS 103 PC MCAAAI + + L +G + Sbjct: 139 PCPMCAAAIRWSGFKELIFGTT 160 >gi|255540237|ref|XP_002511183.1| deoxycytidylate deaminase, putative [Ricinus communis] gi|223550298|gb|EEF51785.1| deoxycytidylate deaminase, putative [Ricinus communis] Length = 224 Score = 60.7 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 42/125 (33%), Gaps = 33/125 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42 + + FM+ A A+ + P VGA V N +I N Sbjct: 62 LSWDDYFMAIAFLSAERSKD----PNRQVGACLVSQNGVILGIGYNGFPRGCSDDKLPWA 117 Query: 43 RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 + + + HAE+ AI + LYVT+ PC CA I + + Sbjct: 118 KKSKTGNPLETKYPYVCHAEVNAILNTNHASA----AGQKLYVTMFPCNECAKIIIQSGV 173 Query: 96 RRLYY 100 + Y Sbjct: 174 SEVIY 178 >gi|221059810|ref|XP_002260550.1| Cytidine and deoxycytidylate deaminase-like protein [Plasmodium knowlesi strain H] gi|193810624|emb|CAQ42522.1| Cytidine and deoxycytidylate deaminase-like protein, putative [Plasmodium knowlesi strain H] Length = 365 Score = 60.7 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 31/57 (54%) Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGIS 133 Y++ EPC MCA A+ +RI+ + + N G + + + +++ +H ++Y + Sbjct: 306 YLSHEPCFMCAMAMVHSRIKCVIFDELNRDNGALFSRAKLHSVKNLNHHFKVYKTVR 362 Score = 39.5 bits (92), Expect = 0.15, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 7/67 (10%) Query: 1 MKKGNVFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +K+ F+ A+ +N + G V N+KII+ +G + HA +LAI Sbjct: 139 IKEFIHFVKIAIRVGKNFGTCQG----GCVLTHNHKIIACSG--DNIKNHPLQHAVMLAI 192 Query: 60 RMGCRIL 66 L Sbjct: 193 EQVSFKL 199 >gi|327412599|emb|CBZ39519.1| cytosine deaminase [Candida dubliniensis] Length = 59 Score = 60.7 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 21/54 (38%), Gaps = 1/54 (1%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAE 55 + AL++A+ + IP+G + + ++ + N + H E Sbjct: 6 DDKKGLQIALDQAKKSYFEGGIPIGLCIISSDGTVLGQGHNERIQKHSSILHGE 59 >gi|327412597|emb|CBZ39518.1| cytosine deaminase [Candida dubliniensis] gi|327412601|emb|CBZ39520.1| cytosine deaminase [Candida dubliniensis] gi|327412603|emb|CBZ39521.1| cytosine deaminase [Candida dubliniensis] gi|327412605|emb|CBZ39522.1| cytosine deaminase [Candida dubliniensis] gi|327412607|emb|CBZ39523.1| cytosine deaminase [Candida dubliniensis] gi|327412609|emb|CBZ39524.1| cytosine deaminase [Candida dubliniensis] Length = 59 Score = 60.7 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 21/54 (38%), Gaps = 1/54 (1%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAE 55 + AL++A+ + IP+G + + ++ + N + H E Sbjct: 6 DDKKGLQIALDQAKKSYFEGGIPIGSCIISSDGTVLGQGHNERIQKHSSILHGE 59 >gi|158522092|ref|YP_001529962.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3] gi|158510918|gb|ABW67885.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3] Length = 155 Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 31/128 (24%), Positives = 43/128 (33%), Gaps = 30/128 (23%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42 FM A+ + VGAV V N ++++ N Sbjct: 15 HTYFMEITELVARRSTCLRRH-VGAVIVKNKRMLATGYNGAPAGVTHCSETGCLRARLNV 73 Query: 43 ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 EL HAE AI + LY T +PC++CA I A I +Y Sbjct: 74 PSGERHELCRGI-HAEQNAIIQAAFHGVS--IQGASLYCTNQPCSICAKMIINAGISAVY 130 Query: 100 Y--GASNP 105 Y G +P Sbjct: 131 YKDGYDDP 138 >gi|260061092|ref|YP_003194172.1| deoxycytidylate deaminase [Robiginitalea biformata HTCC2501] gi|88785224|gb|EAR16393.1| deoxycytidylate deaminase [Robiginitalea biformata HTCC2501] Length = 150 Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 51/150 (34%), Gaps = 31/150 (20%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA--------- 52 K ++ A E + + R + VGA+ V IIS N + Sbjct: 8 KYDKAYLRMANEWGKLSYCRRKQ-VGAIIVRERMIISDGYNGT-----PSGFENFCEDEE 61 Query: 53 --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104 HAE AI LY+TL PC C+ I IRR+ Y Sbjct: 62 GYTKWYVLHAEANAISKVASSTQS--CEGATLYITLSPCRECSKLIHQCGIRRVVY---- 115 Query: 105 PKGGGIENGTQFYTLAT--CHHSPEIYPGI 132 K ++G QF A H P I G+ Sbjct: 116 QKAYKDDSGLQFLARAGVELVHLPVIDIGV 145 >gi|194754595|ref|XP_001959580.1| GF11973 [Drosophila ananassae] gi|190620878|gb|EDV36402.1| GF11973 [Drosophila ananassae] Length = 361 Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123 + D+Y+ EPC MC+ A+ +R +R+++ + G + Q +++ + Sbjct: 287 AKFGPYLCTGYDVYLLQEPCLMCSMALVHSRAKRVFFLRPSDN-GALATRFQLHSVKELN 345 Query: 124 HSPEIY 129 H E++ Sbjct: 346 HHFEVF 351 >gi|190405923|gb|EDV09190.1| dCMP deaminase [Saccharomyces cerevisiae RM11-1a] gi|256269017|gb|EEU04358.1| Dcd1p [Saccharomyces cerevisiae JAY291] gi|323333286|gb|EGA74684.1| Dcd1p [Saccharomyces cerevisiae AWRI796] gi|323337344|gb|EGA78597.1| Dcd1p [Saccharomyces cerevisiae Vin13] gi|323354690|gb|EGA86525.1| Dcd1p [Saccharomyces cerevisiae VL3] Length = 312 Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 34/120 (28%), Gaps = 29/120 (24%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN------------------- 42 + FM A A + R VG V V ++I+ N Sbjct: 164 DSYFMKLATLAASRSNCMKRR---VGCVIVRECRVIATGYNGTPRHLTNCFNGGCPRCND 220 Query: 43 --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE A+ R + LY PC C+ I I + Y Sbjct: 221 GDSRNLHTCLCLHAEENALLEAGRDRVGQN---ATLYCDTCPCLTCSVKIVQTGISEVVY 277 >gi|50285951|ref|XP_445404.1| hypothetical protein [Candida glabrata CBS 138] gi|49524708|emb|CAG58310.1| unnamed protein product [Candida glabrata] Length = 584 Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 57/151 (37%), Gaps = 26/151 (17%) Query: 6 VFMSCALEEA------QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59 +M A+EEA + A VGAV V +++S +R HAE A+ Sbjct: 437 KYMVQAIEEADKCGPTKTAFS-----VGAVLVNGTEVLSVGHSRELPGN---THAEQCAL 488 Query: 60 RMGCRILSQEIL-PEVDLYVTLEPC-------TMCAAAISL--ARIRRLYYGASNPKGGG 109 + + + P ++ T+EPC C I I ++ G P Sbjct: 489 EKYFETHNTDKVPPGTVIFTTMEPCSFRLSGNLPCLQRIMAQDGNISTVFVGVMEPDT-F 547 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQI 140 ++N T L + + PG E++ + I Sbjct: 548 VKNNTSLTDLENNNINYIQIPGY-EEQCKII 577 >gi|62327216|ref|YP_223954.1| deoxycytidylate deaminase [Phage phiJL001] gi|50059534|gb|AAT69506.1| deoxycytidylate deaminase [Phage phiJL001] Length = 244 Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 21/97 (21%) Query: 26 VGAVAVL-NNKIISRAGN--------RNRELKD-VTA-----HAEILAIRMGCRILSQEI 70 VGAV V +N+++ N L+D T HAE AI Sbjct: 129 VGAVVVSEDNRVVGMGYNGFPVGVEDSRERLEDRPTKYMYVVHAEPNAILTAGLQA---- 184 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLY-YGASNPK 106 LY TL PC CA I + IRR+ + + N + Sbjct: 185 -KGGTLYCTLFPCNECAKLIIQSGIRRVVSWASDNQR 220 >gi|325294911|ref|YP_004281425.1| CMP/dCMP deaminase zinc-binding protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065359|gb|ADY73366.1| CMP/dCMP deaminase zinc-binding protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 151 Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 42/126 (33%), Gaps = 28/126 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 FMS A + + VGAV V + +II+ N +L Sbjct: 7 DEYFMSIAEMVSTRSTCIRRK-VGAVLVKDKRIIATGYNGPPSGLKHPEEVGCLREKLNI 65 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE AI L LY T PC++C + A + ++ Y Sbjct: 66 PSGERHELCRGLHAEQNAIIQAA--LHGVFTKGSILYCTHCPCSLCTKMLINAGVVKVIY 123 Query: 101 --GASN 104 G + Sbjct: 124 KEGYPD 129 >gi|46109124|ref|XP_381620.1| hypothetical protein FG01444.1 [Gibberella zeae PH-1] Length = 428 Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 54/171 (31%), Gaps = 56/171 (32%) Query: 1 MKKGN-VFMSCALEEAQNAALRN-EIPVGAVAV-LNN---KIISRAGNRN--------RE 46 +K + V+M+ A A A +GAV V + +++ AG+ Sbjct: 216 IKDDSSVWMALAHRVALQAKETGIGEAIGAVIVQRDGGKVELVGVAGDARWHQECGPLGG 275 Query: 47 LKDVTAHAEILAI------------RMGCRILSQEILP---------------------- 72 + H + AI R + L Sbjct: 276 TSNPMTHCVVRAISMVAQKLVRHERRAAGLPFNPPNLDYDAFQDGPLLEIEKKCFVQEHP 335 Query: 73 --------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115 ++LYVT EPC C+ I +R+ + + P+ GG+ + + Sbjct: 336 NKDGYLCHGLELYVTHEPCVSCSMGILHSRMGKAVFATHMPRSGGLSSDDR 386 >gi|89056237|ref|YP_511688.1| CMP/dCMP deaminase, zinc-binding [Jannaschia sp. CCS1] gi|88865786|gb|ABD56663.1| CMP/dCMP deaminase zinc-binding protein [Jannaschia sp. CCS1] Length = 150 Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 31/92 (33%), Gaps = 20/92 (21%) Query: 26 VGAVAV--LNNKIISRAGN---RNRELKDVTA-------------HAEILAIRMGCRILS 67 VG V V N++ + N R + HAE AI RI Sbjct: 29 VGCVIVGPQGNEVRATGYNGLPRGVSDTNEARFDRASGEKFFWGEHAERNAIYNAARIGV 88 Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 L +YV PC CA AI I R+ Sbjct: 89 S--LQGCTIYVNRFPCADCARAIIQCGIERVV 118 >gi|328785680|ref|XP_392413.3| PREDICTED: deoxycytidylate deaminase-like isoform 1 [Apis mellifera] Length = 189 Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 43/123 (34%), Gaps = 31/123 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNR------------N 44 + + FM+ A A+ + P VGA V +K I+ N Sbjct: 26 IDWEDYFMAIAFLSAKRSKD----PRTQVGACIVNEDKQIVGIGYNGMPKGCSDDEFSWC 81 Query: 45 RELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 + D HAE+ AI + + +YV L PC CA I + I+ Sbjct: 82 KNSNDSLKNKSLYVCHAEVNAILN----KNCSSVKNCTIYVALFPCNECAKVIIQSGIKL 137 Query: 98 LYY 100 + Y Sbjct: 138 VKY 140 >gi|259146902|emb|CAY80158.1| Dcd1p [Saccharomyces cerevisiae EC1118] Length = 312 Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 34/120 (28%), Gaps = 29/120 (24%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN------------------- 42 + FM A A + R VG V V ++I+ N Sbjct: 164 DSYFMKLATLAASRSNCMKRR---VGCVIVRECRVIATGYNGTPRHLTNCFNGGCPRCND 220 Query: 43 --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE A+ R + LY PC C+ I I + Y Sbjct: 221 GDSRNLHTCLCLHAEENALLEAGRDRVGQN---ATLYCDTCPCLTCSVKIVQTGISEVVY 277 >gi|207344561|gb|EDZ71669.1| YHR144Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 288 Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 34/120 (28%), Gaps = 29/120 (24%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN------------------- 42 + FM A A + R VG V V ++I+ N Sbjct: 164 DSYFMKLATLAASRSNCMKRR---VGCVIVRECRVIATGYNGTPRHLTNCFNGGCPRCND 220 Query: 43 --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE A+ R + LY PC C+ I I + Y Sbjct: 221 GDSRNLHTCLCLHAEENALLEAGRDRVGQN---ATLYCDTCPCLTCSVKIVQTGISEVVY 277 >gi|253581046|ref|ZP_04858307.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847709|gb|EES75678.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 163 Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 42/122 (34%), Gaps = 24/122 (19%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGN-------------RNRE 46 + FM A+ + N VGA V +NKI+S N Sbjct: 11 LSWDEYFMGVAMMSGMRSKDPNSQ-VGACIVSEDNKILSMGYNGFPKGCSDDEFPWAREG 69 Query: 47 LKDVT-----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 T H+E+ AI L LYV+L PC CA AI A I+ + Y Sbjct: 70 DSLHTKYFYVTHSELNAILN----YRGGSLEGAKLYVSLFPCNECAKAIIQAGIKTIVYD 125 Query: 102 AS 103 Sbjct: 126 CD 127 >gi|237651485|ref|YP_002898956.1| putative deoxycytidylate deaminase [Roseophage EE36P1] gi|220898117|gb|ACL81374.1| hypothetical protein [Sulfitobacter phage EE36phi1] Length = 142 Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 23/113 (20%) Query: 11 ALEEAQNAALRNEIP---VGAVAVLNNKIISR-AGN---RNRELK-----------DVTA 52 AL A+ + R+ P VGAV + +K I+ N R E K Sbjct: 9 ALGLAEAVSKRSRDPSTKVGAVIIRPDKTIASMGYNGFPRTMEDKEEWWSDRPQKYSRVI 68 Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105 H E+ A+ +E + + LY T C CA I A I R+ +G S Sbjct: 69 HGEMNALLNA-----KEPVLAMTLYCTHPCCEHCAKHIIAAGISRVVFGTSEE 116 >gi|6321938|ref|NP_012014.1| Dcd1p [Saccharomyces cerevisiae S288c] gi|729306|sp|P06773|DCTD_YEAST RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP deaminase gi|500658|gb|AAB68985.1| Dcd1p: dCMP deaminase [Saccharomyces cerevisiae] gi|151944091|gb|EDN62384.1| dCMP deaminase [Saccharomyces cerevisiae YJM789] gi|285810051|tpg|DAA06838.1| TPA: Dcd1p [Saccharomyces cerevisiae S288c] Length = 312 Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 34/120 (28%), Gaps = 29/120 (24%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN------------------- 42 + FM A A + R VG V V ++I+ N Sbjct: 164 DSYFMKLATLAASRSNCMKRR---VGCVIVRECRVIATGYNGTPRHLTNCFNGGCPRCND 220 Query: 43 --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE A+ R + LY PC C+ I I + Y Sbjct: 221 GDSRNLHTCLCLHAEENALLEAGRDRVGQN---ATLYCDTCPCLTCSVKIVQTGISEVVY 277 >gi|323348302|gb|EGA82551.1| Dcd1p [Saccharomyces cerevisiae Lalvin QA23] Length = 272 Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 34/120 (28%), Gaps = 29/120 (24%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN------------------- 42 + FM A A + R VG V V ++I+ N Sbjct: 124 DSYFMKLATLAASRSNCMKRR---VGCVIVRECRVIATGYNGTPRHLTNCFNGGCPRCND 180 Query: 43 --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE A+ R + LY PC C+ I I + Y Sbjct: 181 GDSRNLHTCLCLHAEENALLEAGRDRVGQN---ATLYCDTCPCLTCSVKIVQTGISEVVY 237 >gi|157952575|ref|YP_001497467.1| hypothetical protein NY2A_B271R [Paramecium bursaria Chlorella virus NY2A] gi|155122802|gb|ABT14670.1| hypothetical protein NY2A_B271R [Paramecium bursaria Chlorella virus NY2A] Length = 145 Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 28/112 (25%) Query: 8 MSCALEEAQNAALRNEIPV--GAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCR 64 + A+E A A R+ P G V + KII+ N R + HAE+ A+ Sbjct: 29 LDEAIESAIEQANRSSGPFKHGCVIMSGKKIIATGNNHTRRDIGTFSIHAEMDAL----- 83 Query: 65 ILSQEILPEVDLY----------------VTLEPCTMCAAAISLARIRRLYY 100 + + DLY PC MC AA+ IR + Y Sbjct: 84 ----WRISDSDLYDNMKAVIIRVTNTGKLANSRPCEMCMAALKQHNIRTIVY 131 >gi|317051269|ref|YP_004112385.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum S5] gi|316946353|gb|ADU65829.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum S5] Length = 154 Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 45/128 (35%), Gaps = 29/128 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------RNRELK 48 FM+ E + ++ +GA+ V +II+ N E Sbjct: 10 DQYFMNITAEVGRRSSCLR-RQIGAIIVREKRIIATGYNGAPPGVRSSMEIGSCLRDERN 68 Query: 49 DVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL- 98 + HAE AI R + + LY T +PC++CA I A IR + Sbjct: 69 IPSGTQHEICRGLHAEQNAILQAARFGTS--VEGATLYCTHQPCSICAKIIIGAGIREVK 126 Query: 99 -YYGASNP 105 +G + Sbjct: 127 YVHGYPDE 134 >gi|146276894|ref|YP_001167053.1| riboflavin biosynthesis protein RibD [Rhodobacter sphaeroides ATCC 17025] gi|145555135|gb|ABP69748.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase [Rhodobacter sphaeroides ATCC 17025] Length = 356 Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 47/148 (31%), Gaps = 21/148 (14%) Query: 8 MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 M+ AL R VG V V +++ R R HAE + Sbjct: 1 MAHALRLGARGLGRTWPNPAVGCVIVKAGRVVGRGWTRPGGR----PHAEPV-----ALA 51 Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119 + YVTLEPC CA A++ A + R+ +P G Sbjct: 52 EAGAAALGATAYVTLEPCAHHGRTPPCAEALAAAGVARVVTATGDPDPRVAGRGHALLHA 111 Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147 A + G+ E +R F K Sbjct: 112 AG----IAVTEGVLEAEARAANAGFLKR 135 >gi|301090647|ref|XP_002895529.1| deoxycytidylate deaminase [Phytophthora infestans T30-4] gi|262097843|gb|EEY55895.1| deoxycytidylate deaminase [Phytophthora infestans T30-4] Length = 122 Score = 60.3 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 4/75 (5%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 HAE+ AI + + +YV L PC CA I + I R+ Y + N K Sbjct: 40 HAEMNAILN----KNSTDVKGCSIYVALFPCNECAKLIIQSGIARVVYYSDNWKFVASRR 95 Query: 113 GTQFYTLATCHHSPE 127 + H + Sbjct: 96 LLDMAGVQYTQHKLQ 110 >gi|227872739|ref|ZP_03991063.1| hypothetical protein HMPREF6123_1002 [Oribacterium sinus F0268] gi|227841417|gb|EEJ51723.1| hypothetical protein HMPREF6123_1002 [Oribacterium sinus F0268] Length = 58 Score = 60.3 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 21/52 (40%) Query: 98 LYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 L + NPK G + + +H I + E +R+++ FF R Sbjct: 1 LVFSLRNPKAGFCGSLLNVLQMKELNHRVVIRENVLEGEARELLSHFFSSMR 52 >gi|171384|gb|AAA34561.1| dCMP deaminase [Saccharomyces cerevisiae] Length = 312 Score = 60.3 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 34/120 (28%), Gaps = 29/120 (24%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN------------------- 42 + FM A A + R VG V V ++I+ N Sbjct: 164 DSYFMKLATLAASRSNCMKRR---VGCVIVRECRVIATGYNGTPRHLTNCFNGGCPRCND 220 Query: 43 --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE A+ R + LY PC C+ I I + Y Sbjct: 221 GDSRNLHTCLCLHAEENALLEAGRDRVGQN---ATLYCDTCPCLTCSVKIVQTGISEVVY 277 >gi|325679436|ref|ZP_08159020.1| cytidine and deoxycytidylate deaminase zinc-binding region [Ruminococcus albus 8] gi|324108864|gb|EGC03096.1| cytidine and deoxycytidylate deaminase zinc-binding region [Ruminococcus albus 8] Length = 159 Score = 60.3 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 31/125 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGNR----NRELKDV-- 50 + + F+ A + +A R++ P VGA V NKI+S N + + Sbjct: 8 ISWDDYFLGIA----ELSAARSKDPNTQVGACIVSEENKILSVGYNGMPAGCNDDEMPWG 63 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ A+ + S L +YV+L PC CA AI + I+ + Sbjct: 64 RKGDFLDTKYPFVCHAELNAV-----LNSNHDLKGSRIYVSLFPCNECAKAIIQSGIKEV 118 Query: 99 YYGAS 103 Y Sbjct: 119 IYTCD 123 >gi|193216732|ref|YP_001999974.1| deoxycytidylate deaminase [Mycoplasma arthritidis 158L3-1] gi|193002055|gb|ACF07270.1| deoxycytidylate deaminase [Mycoplasma arthritidis 158L3-1] Length = 173 Score = 60.3 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 51/132 (38%), Gaps = 36/132 (27%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + FMS A+ +A+R++ P VGA V N I+S N Sbjct: 9 IDWDKYFMS----LAKLSAMRSKDPSTKVGACIVNTKNYIVSLGYNGMPTSFNNTKINND 64 Query: 43 ------RNRELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAA 89 R D+ HAE AI I S I P LYVT PC MCA Sbjct: 65 TQFPWDRPSNKDDIINSKYTYVVHAEQNAIINA-NITSSHIEPGSTLYVTHSPCAMCAKL 123 Query: 90 ISLARIRRLYYG 101 + ++I+++ Y Sbjct: 124 VVQSKIKKVVYA 135 >gi|220925141|ref|YP_002500443.1| riboflavin biosynthesis protein RibD [Methylobacterium nodulans ORS 2060] gi|219949748|gb|ACL60140.1| riboflavin biosynthesis protein RibD [Methylobacterium nodulans ORS 2060] Length = 388 Score = 60.3 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 52/150 (34%), Gaps = 29/150 (19%) Query: 4 GNVFMSCALEEAQNAALRNEI---P-VGAVAVLN----NKIISRAGNRNRELKDVTAHAE 55 +M AL + E P VGAV V +I+++ + HAE Sbjct: 12 DRRYMRLALALGRRHL--GETWPNPSVGAVLVAGPPGAERILAQGVTQPGGR----PHAE 65 Query: 56 ILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGG 109 + + E LYVTLEPC+ CA A+ A I R+ ++P Sbjct: 66 RI-----ALAAAGEAARGATLYVTLEPCSHHGRTSPCADAVVEAGIARVVSAMADPDPRV 120 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQ 139 G + A + G Q + + Sbjct: 121 AGRGHGRLSAAG----IAVTVGTLGQEAAR 146 >gi|254445886|ref|ZP_05059362.1| riboflavin biosynthesis protein RibD [Verrucomicrobiae bacterium DG1235] gi|198260194|gb|EDY84502.1| riboflavin biosynthesis protein RibD [Verrucomicrobiae bacterium DG1235] Length = 377 Score = 60.3 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 52/153 (33%), Gaps = 24/153 (15%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M ALEEA+ P +GA V ++++ + E TA E+ R Sbjct: 1 MKVALEEARKGWGCT-HPQPMIGAALVEAGQVVATSY---IEQPGSTA-PEVRLFERLGR 55 Query: 65 ILSQEILPEVDLYVTLEPCTMC------AAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 L++TLEP AI + + + GAS+P G Sbjct: 56 KPK----EGASLFLTLEPGPSSNRLESGVRAIIDSGVSYVVIGASDPMPEHANKGADALK 111 Query: 119 LATCHHSPEIYPGISEQRSRQI--IQDFFKERR 149 ++ I + + I +F+ + R Sbjct: 112 EGG----VKVERRILIEDCEDLNIISNFWVQNR 140 >gi|254585289|ref|XP_002498212.1| ZYRO0G04972p [Zygosaccharomyces rouxii] gi|238941106|emb|CAR29279.1| ZYRO0G04972p [Zygosaccharomyces rouxii] Length = 358 Score = 60.3 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 35/120 (29%), Gaps = 29/120 (24%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50 FM A A + R VG V V ++I+ N R L + Sbjct: 210 DTYFMKLATLAASRSNCMKRK---VGCVIVRERRVIATGYNGTPRHLTNCFNGGCPRCND 266 Query: 51 ----------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE A+ R I LY PC C+ I I + Y Sbjct: 267 GDSQNLHTCLCLHAEENALLEAGR---DRIGAHATLYCDTCPCLTCSVKIVQTGITEVVY 323 >gi|226366358|ref|YP_002784141.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Rhodococcus opacus B4] gi|226244848|dbj|BAH55196.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Rhodococcus opacus B4] Length = 354 Score = 60.3 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 45/137 (32%), Gaps = 23/137 (16%) Query: 8 MSCALEEAQNA--ALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A+ A++A VGAV + +I + HAE++A+R Sbjct: 18 MQIAIGAAESARGFTSPNPAVGAVVLDAAGRIAGVGMTQPPGG----PHAEVVALREAGD 73 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 VTLEPC C+ A+ A + ++Y +P + Sbjct: 74 AA-----RGGTAVVTLEPCNHHGRTGPCSQALLDAGVVAVHYAVGDPNPEAAGGAEALVS 128 Query: 119 LATCHHSPEIYPGISEQ 135 E+ G+ Sbjct: 129 A-----GVEVTSGLRAD 140 >gi|296114200|ref|ZP_06832855.1| riboflavin biosynthesis protein RibD [Gluconacetobacter hansenii ATCC 23769] gi|295979276|gb|EFG85999.1| riboflavin biosynthesis protein RibD [Gluconacetobacter hansenii ATCC 23769] Length = 357 Score = 60.3 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 38/105 (36%), Gaps = 13/105 (12%) Query: 25 PVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83 PVG + I+ + T HAE AI CR + VTLEPC Sbjct: 42 PVGCAILDAAGTILCTGAHHRA----GTPHAEARAI-ALCRERGLIE-RAHTIVVTLEPC 95 Query: 84 TM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 C+ AI IR ++ GA++P G F C Sbjct: 96 NHTGRTGPCSQAIMHTPIRTVWIGATDPNPNVAGGGADFLRDHGC 140 >gi|170085575|ref|XP_001874011.1| predicted protein [Laccaria bicolor S238N-H82] gi|164651563|gb|EDR15803.1| predicted protein [Laccaria bicolor S238N-H82] Length = 286 Score = 60.3 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 38/121 (31%), Gaps = 28/121 (23%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV------------ 50 FM+ A A + + VGAV V N++++ N R LK+ Sbjct: 129 DAYFMTLA-SLASRRSNCMKRRVGAVLVRENRVLATGYNGTPRGLKNCNEGGCPQCNGRV 187 Query: 51 -----------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 HAE A+ R LY PC C I ++ + Sbjct: 188 LPSPSHSYECVCLHAEENALLEAGRERVG---TNAVLYCNTCPCLRCTVKIIQTGVKTVV 244 Query: 100 Y 100 Y Sbjct: 245 Y 245 >gi|149197544|ref|ZP_01874595.1| hypothetical protein LNTAR_01145 [Lentisphaera araneosa HTCC2155] gi|149139562|gb|EDM27964.1| hypothetical protein LNTAR_01145 [Lentisphaera araneosa HTCC2155] Length = 151 Score = 60.3 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 41/120 (34%), Gaps = 26/120 (21%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV------------ 50 FM+ A A+ ++ V AV V + ++IS N R +K+ Sbjct: 10 DQYFMNIAHVAAERSSCSRRH-VAAVIVKDKRVISTGYNGTPRGVKNCDDGGCPRCNSDV 68 Query: 51 ----------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE +I + +Y T PC +CA I A I + + Sbjct: 69 ASGHGLDECLCCHAEENSIVQAA--CHGISINGASIYTTYSPCLLCAKMIINAGIHEVIF 126 >gi|316979440|gb|EFV62236.1| putative deoxycytidylate deaminase [Trichinella spiralis] Length = 165 Score = 60.3 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 42/123 (34%), Gaps = 31/123 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPV---GAVAV-LNNKIISRAGN-------------- 42 + + FM A ++ + PV GA ++ IIS N Sbjct: 3 LDTESFFMGIACLSSKRSKD----PVTQVGACIANSSDVIISTGYNGMPVGCDDNVLPWG 58 Query: 43 ----RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 E K HAE+ A L LYVTL PC MCA I + I+ Sbjct: 59 KSLPNPLETKHPFVCHAELNAFLNAS----TSELSGCRLYVTLFPCNMCAKLIISSGIKE 114 Query: 98 LYY 100 + Y Sbjct: 115 IIY 117 >gi|120437804|ref|YP_863490.1| cytidine/deoxycytidylate deaminase family protein [Gramella forsetii KT0803] gi|117579954|emb|CAL68423.1| cytidine/deoxycytidylate deaminase family protein [Gramella forsetii KT0803] Length = 143 Score = 60.3 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 25/117 (21%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-------- 52 +K ++ A E ++ + + VGA+ V + IIS N T Sbjct: 7 LKFDKAYLRIAREWSKLSHCNRKQ-VGALIVKDRMIISDGYNGT-----PTGFENFCEDE 60 Query: 53 ---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI S + + LY+T+ PC C+ I + I RL + Sbjct: 61 EGYTKWYVLHAEANAILKVA--GSTQSCKDATLYITMSPCKECSKLIHQSGISRLVF 115 >gi|293364019|ref|ZP_06610755.1| cytidine and deoxycytidylate deaminase zinc-binding region [Mycoplasma alligatoris A21JP2] gi|292552509|gb|EFF41283.1| cytidine and deoxycytidylate deaminase zinc-binding region [Mycoplasma alligatoris A21JP2] Length = 158 Score = 60.3 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 45/128 (35%), Gaps = 33/128 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKDV------ 50 + F + A+ +ALR++ P VGA + + K +I N D+ Sbjct: 5 INWDTYF----ISLAKISALRSKDPSTQVGACIINDEKKVIGLGYNGMPNGNDIDFPWGR 60 Query: 51 ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 HAE+ AI +Y TL PC CA I + I+ + Sbjct: 61 DSKIAKETKYPYVVHAEVNAILNAIVQP-----KGAIIYTTLYPCINCAKVIVQSGIKEV 115 Query: 99 YYGASNPK 106 + + K Sbjct: 116 VF--EDDK 121 >gi|332297977|ref|YP_004439899.1| CMP/dCMP deaminase zinc-binding protein [Treponema brennaborense DSM 12168] gi|332181080|gb|AEE16768.1| CMP/dCMP deaminase zinc-binding protein [Treponema brennaborense DSM 12168] Length = 166 Score = 60.3 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 34/120 (28%), Gaps = 27/120 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAG---------------------- 41 + FM A+ A G V +N+I+ Sbjct: 15 DDYFMEICRTVAKRATCDRGR-SGCVIARDNRILVTGYVGSPAGLPHCDDVGHLLKKMVH 73 Query: 42 -NRNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 N V T HAE AI + + LY + PC C I I+R+ Sbjct: 74 ENGTVTQHCVRTVHAEQNAICQAAKNGIS--IDGATLYCKMTPCRTCTMLIINCGIKRVV 131 >gi|169629892|ref|YP_001703541.1| bifunctional riboflavin biosynthesis protein RibG [Mycobacterium abscessus ATCC 19977] gi|169241859|emb|CAM62887.1| Probable bifunctional riboflavin biosynthesis protein RibG [Mycobacterium abscessus] Length = 340 Score = 60.3 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 28/156 (17%) Query: 8 MSCALEEAQNAALR--N----EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 + A++ A AA PVGAV + ++ G R + HAE++ Sbjct: 7 LDEAMDLAIRAAEEVKGSTYPNPPVGAVILDAAGQVAGVGGTRPPGQE----HAEVV--- 59 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 + VTLEPC C A++ A + R+ Y ++P Sbjct: 60 --ALAGAGAAARGGTAVVTLEPCNHQGRTGPCVDALAAAGVSRVVYAVADPNPQAAGGAA 117 Query: 115 QFYTLATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149 + TL E+ G++ R S ++++ ++R Sbjct: 118 RLRTL-----GIEVLDGLASDRVSAGPLREWLHKQR 148 >gi|326427835|gb|EGD73405.1| hypothetical protein PTSG_05101 [Salpingoeca sp. ATCC 50818] Length = 390 Score = 60.3 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121 ++ S +L +D+++T EPC MC+ A+ +R+ R+++ + G I + + Sbjct: 319 AGQLESSYLLKGLDVFLTHEPCIMCSMALVHSRVGRIFFETTCAD-GAISTNHEIHQHDN 377 Query: 122 CHHSPE 127 +H + Sbjct: 378 LNHRFD 383 >gi|94265530|ref|ZP_01289278.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta proteobacterium MLMS-1] gi|93453971|gb|EAT04317.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta proteobacterium MLMS-1] Length = 151 Score = 60.3 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 44/126 (34%), Gaps = 28/126 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 FM+ AQ A VGAV V +I++ N ++ Sbjct: 11 DEYFMAITDLVAQRATCLR-RQVGAVLVRERRIVATGYNGAPSNIRHCLEVGCLRQQQGV 69 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE AI L L LY T PC++C+ + A + R+YY Sbjct: 70 PSGERHELCRGLHAEQNAIIQAA--LHGVSLQGSVLYCTNMPCSICSKMLINAAVTRIYY 127 Query: 101 --GASN 104 G + Sbjct: 128 RDGYPD 133 >gi|167828089|ref|ZP_02459560.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 9] Length = 97 Score = 60.3 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 33/98 (33%), Gaps = 17/98 (17%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M+ AL A+ VG V + + +R HAE+ A+R Sbjct: 8 DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALRE 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLA 93 E YVTLEPC CA A+ A Sbjct: 64 AG-----ERARGATAYVTLEPCAHFGRTPPCANALVAA 96 >gi|325849001|ref|ZP_08170511.1| putative ComE operon protein 2 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480645|gb|EGC83707.1| putative ComE operon protein 2 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 146 Score = 60.3 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 18/91 (19%) Query: 26 VGAVAVLN-NKIISRAGNRNR-----------ELKD----VTAHAEILAIRMGCRILSQE 69 VG V V N N+IIS N + ++D T HAE+ A+ + Sbjct: 30 VGCVLVNNENRIISTGYNGSIKGNPHCDEVGHTMRDGHCIATIHAEMNALLYCAKEGIS- 88 Query: 70 ILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + YVT PC C ++ A ++ +YY Sbjct: 89 -VKNSICYVTHFPCLNCTKSLIQAGVKEIYY 118 >gi|255034861|ref|YP_003085482.1| CMP/dCMP deaminase zinc-binding [Dyadobacter fermentans DSM 18053] gi|254947617|gb|ACT92317.1| CMP/dCMP deaminase zinc-binding [Dyadobacter fermentans DSM 18053] Length = 164 Score = 60.3 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 55/164 (33%), Gaps = 51/164 (31%) Query: 4 GNVFMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGNRN-RELKDV--------- 50 +++M A A+ + + VGAV + +IIS N + Sbjct: 13 DDIYMDLAKNLAKRSHCIKAQ----VGAVLTKDTRIISIGYNGPPAGTHNCDEEFPGVGC 68 Query: 51 ----------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI + + + L+VTL PC CA I +I+++ + Sbjct: 69 PRDAKGSCSLALHAEQNAILFA--VKNGSNIEGSTLFVTLAPCIACARVIYTMKIKKVIF 126 Query: 101 GASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 HS Y GI+ + + ++ F Sbjct: 127 ----------------------LHSYAAYKGIAVEEGVEFLRRF 148 >gi|317484775|ref|ZP_07943674.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bilophila wadsworthia 3_1_6] gi|316923982|gb|EFV45169.1| cytidine and deoxycytidylate deaminase zinc-binding region [Bilophila wadsworthia 3_1_6] Length = 165 Score = 60.3 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 26/125 (20%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKDV 50 + FM+ A A+ + VGAVAV + +I++ N +L Sbjct: 8 DYFMNIAHLVAERSTCLRRR-VGAVAVKDKRILATGYNGAPSKVAHCLDIGCLREQLGVP 66 Query: 51 TA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101 + HAE I + L ++Y T +PC +C+ + I +++Y Sbjct: 67 SGQRHEICRGLHAEQNVIIQAA--VHGISLAGAEVYCTHQPCLICSKMLINCGITKIWYA 124 Query: 102 ASNPK 106 + P Sbjct: 125 SGYPD 129 >gi|262182497|ref|ZP_06041918.1| riboflavin biosynthesis protein ribD [Corynebacterium aurimucosum ATCC 700975] Length = 342 Score = 60.3 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 45/128 (35%), Gaps = 22/128 (17%) Query: 2 KKGNVFMSCALEEAQNAAL--RN----EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHA 54 + N + AL A A R PVGAV + + +++ + HA Sbjct: 4 RNDNPVLMRALHVAMGAGEQVRGTTSPNPPVGAVILDSAGQVVGVGATQPPGG----PHA 59 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGG 108 E++A+R VTLEPC CA A+ A + +YY +P Sbjct: 60 EVMALRDAGDKA-----RGGTAVVTLEPCNHTGRTGPCAQALIDASVAAVYYLHPDPTPQ 114 Query: 109 GIENGTQF 116 T Sbjct: 115 AGGGSTTL 122 >gi|297618439|ref|YP_003703598.1| CMP/dCMP deaminase zinc-binding protein [Syntrophothermus lipocalidus DSM 12680] gi|297146276|gb|ADI03033.1| CMP/dCMP deaminase zinc-binding protein [Syntrophothermus lipocalidus DSM 12680] Length = 153 Score = 60.3 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 26/119 (21%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 + F+ A+ + VGA+ V + +II+ N E Sbjct: 9 DDYFLELTQVVAKRSTCLRRH-VGALLVKDERIIATGYNGAPQGLRHCLEAGCLREEKGI 67 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 + HAE AI R + + LY T +PC +CA + A I+++ Sbjct: 68 PSGVRYELCRGVHAEQNAIINAARYGVSTL--DSVLYCTDQPCILCARMLINAGIKKVI 124 >gi|314121791|ref|YP_004063910.1| deoxycytidylate deaminase [Enterobacteria phage vB_EcoM-VR7] gi|313151548|gb|ADR32604.1| deoxycytidylate deaminase [Enterobacteria phage vB_EcoM-VR7] Length = 193 Score = 60.3 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 36 IISRAGNRNRE--LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93 ++++A K+ HAE+ AI R+ S + +YVTL PC CA AIS + Sbjct: 85 VLAKAHREEHSAWSKNNEIHAELNAILFAARMGSS--IEGATMYVTLSPCPDCAKAISQS 142 Query: 94 RIRRLYYGASNPKG 107 I++L Y + K Sbjct: 143 GIKKLVYCETYDKN 156 >gi|155370112|ref|YP_001425646.1| hypothetical protein FR483_N014L [Paramecium bursaria Chlorella virus FR483] gi|155123432|gb|ABT15299.1| hypothetical protein FR483_N014L [Paramecium bursaria Chlorella virus FR483] Length = 119 Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 28/112 (25%) Query: 8 MSCALEEAQNAALRNEIPV--GAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCR 64 + A++EA ALR++ P + KII+R N R+ + HAEI AI Sbjct: 4 LHEAIDEAAKYALRSDGPFKHSCFIMSGKKIIARGNNHVRQQIGTSSVHAEIDAI----- 58 Query: 65 ILSQEILPEVDLYVTL----------------EPCTMCAAAISLARIRRLYY 100 + DLY L PC MC +A+ I+ + Y Sbjct: 59 ----WRINNTDLYDNLKAIIIRSSPTGRLGNSRPCVMCMSALKQHGIKTIVY 106 >gi|302669645|ref|YP_003829605.1| deoxycytidylate deaminase [Butyrivibrio proteoclasticus B316] gi|302394118|gb|ADL33023.1| deoxycytidylate deaminase [Butyrivibrio proteoclasticus B316] Length = 170 Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 46/123 (37%), Gaps = 31/123 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + FM A + AA+R++ P VG+ V +N I+S N Sbjct: 17 ISWDEYFMGVA----KLAAMRSKDPNTQVGSCIVSEDNNILSMGYNGFPKGCSDEEFPWE 72 Query: 43 ----RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 K H+E+ AI L +YV+L PC CA AI A IR Sbjct: 73 RDGEDELGTKYPFVTHSELNAILN----YRGGSLVGAKIYVSLFPCNECAKAIIQAGIRT 128 Query: 98 LYY 100 + Y Sbjct: 129 VVY 131 >gi|254564943|ref|XP_002489582.1| DRAP deaminase, catalyzes the third step of the riboflavin biosynthesis pathway [Pichia pastoris GS115] gi|238029378|emb|CAY67301.1| DRAP deaminase, catalyzes the third step of the riboflavin biosynthesis pathway [Pichia pastoris GS115] gi|328350006|emb|CCA36406.1| DRAP deaminase [Pichia pastoris CBS 7435] Length = 547 Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 49/133 (36%), Gaps = 21/133 (15%) Query: 4 GNVFMSCALEEAQNAALRNEIP--VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60 M A+EEA+ E VG + N +IISR +R E HAE + Sbjct: 406 HREMMKLAIEEAKKC-DHTETAFNVGCIITDENGEIISRGYSREFEGN---THAE----Q 457 Query: 61 MGCRILSQEILPEVDLYVTLEPCT-------MCAAAISLAR--IRRLYYGASNP-KGGGI 110 L ++ P LY T+EPC+ C I + + ++ G P K Sbjct: 458 CALMKLDYKLPPGSILYTTMEPCSERLSGNKPCVNRIIDLKGEVITVFVGVVEPKKFIAD 517 Query: 111 ENGTQFYTLATCH 123 G + A + Sbjct: 518 NTGKRQLEDAGVN 530 >gi|195348175|ref|XP_002040626.1| GM22266 [Drosophila sechellia] gi|194122136|gb|EDW44179.1| GM22266 [Drosophila sechellia] Length = 191 Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 50/155 (32%), Gaps = 40/155 (25%) Query: 4 GNVFMSCALEEAQNAALRNEIPV---GAVAVL-NNKIISRAGN----------------- 42 + FM+ +L A+ + PV GA V N+I++ N Sbjct: 29 DDYFMATSLLSAKRSKD----PVTQVGACIVDSQNRIVAIGYNGFPRNCSDDVFPWSKAT 84 Query: 43 RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 + + D HAE AI + L LY TL PC CA I I Sbjct: 85 KRSKKDDPLEDKKMYVVHAEANAILN----TNGMSLSGTRLYTTLFPCNECAKLIIQVGI 140 Query: 96 RRLYY----GASNPKGGGIENGTQFYTLATCHHSP 126 ++ Y A PK + + H P Sbjct: 141 SQVLYLSDKYAYKPKYRASKRMLDAVGVEYKRHIP 175 >gi|83951487|ref|ZP_00960219.1| riboflavin biosynthesis protein RibD [Roseovarius nubinhibens ISM] gi|83836493|gb|EAP75790.1| riboflavin biosynthesis protein RibD [Roseovarius nubinhibens ISM] Length = 364 Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 52/157 (33%), Gaps = 31/157 (19%) Query: 2 KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTA-----HA 54 ++ M AL ++A P VG V V ++I+ R TA HA Sbjct: 3 EQDIHHMREALRLGRSAMGSAWPNPAVGCVIVAGDQIVGRG---------ATAPGGRPHA 53 Query: 55 EILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108 E + YVTLEPC CA + A + R+ + Sbjct: 54 EPQ-----ALAEAGAAARGATAYVTLEPCAHHGKTPPCAEVLIKAGVARVVVAVGDSDPR 108 Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145 G + A E+ G+ E +R + FF Sbjct: 109 VSGRGIEMLRKAG----IEVVQGVLEDEARTDLAGFF 141 >gi|224370212|ref|YP_002604376.1| hypothetical protein HRM2_31290 [Desulfobacterium autotrophicum HRM2] gi|223692929|gb|ACN16212.1| conserved hypothetical protein [Desulfobacterium autotrophicum HRM2] Length = 167 Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 40/124 (32%), Gaps = 30/124 (24%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNREL 47 FM A A A R VGA+ V +I+ N +L Sbjct: 22 DVYFMDIARLVATRATCLRRK---VGAILVKERRILCSGYNGAPTHVPHCDVTGCLREQL 78 Query: 48 KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 + HAE AI + LY T +PC++CA I A I ++ Sbjct: 79 NVPSGQKHELCRGVHAEQNAIIQAA--YHGISVKGSTLYCTHKPCSICAKMIINAGIVQV 136 Query: 99 YYGA 102 + Sbjct: 137 CFAT 140 >gi|306821103|ref|ZP_07454719.1| guanine deaminase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550796|gb|EFM38771.1| guanine deaminase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 63 Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 21/47 (44%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV 50 VFM +E ++ A P GAV V +++I+ N+ D Sbjct: 13 DEVFMEKTIELSRLAVEHGNEPFGAVLVKDDEIVFTNENQIYTKHDP 59 >gi|85014315|ref|XP_955653.1| hypothetical protein ECU09_0990 [Encephalitozoon cuniculi GB-M1] gi|19171347|emb|CAD27072.1| hypothetical protein [Encephalitozoon cuniculi GB-M1] Length = 302 Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 7/104 (6%) Query: 27 GAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85 GA + + I+S + DV H+ + A+ + + +D ++ EPC Sbjct: 196 GACIIAGGEGIVSV----QEDTDDVLGHSVLRAVEEVSKAQVSYLCTGLDAFIPREPCLS 251 Query: 86 CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129 C+ A RI+R++ GG +G + + +H +Y Sbjct: 252 CSMAFVHGRIKRVF--CVKRVSGGPFSGLKINYNKSLNHRYPVY 293 >gi|94264510|ref|ZP_01288297.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta proteobacterium MLMS-1] gi|93455069|gb|EAT05296.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta proteobacterium MLMS-1] Length = 151 Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 44/126 (34%), Gaps = 28/126 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49 FM+ AQ A VGAV V +I++ N ++ Sbjct: 11 DEYFMAITDLVAQRATCLR-RQVGAVLVRERRIVATGYNGAPSHIRHCLEVGCLRQQQGV 69 Query: 50 VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + HAE AI L L LY T PC++C+ + A + R+YY Sbjct: 70 PSGERHELCRGLHAEQNAIIQAA--LHGVSLQGSVLYCTNMPCSICSKMLINAAVTRIYY 127 Query: 101 --GASN 104 G + Sbjct: 128 RDGYPD 133 >gi|307174184|gb|EFN64829.1| Deoxycytidylate deaminase [Camponotus floridanus] Length = 168 Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 42/117 (35%), Gaps = 32/117 (27%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN----------------RNREL 47 M+ A A+ + P VGA V N+K I+ N + Sbjct: 1 MAIAFLSAKRSKD----PCTQVGACIVNNDKRIVGIGYNGMPMGCDDDKFPWGKGSHNRD 56 Query: 48 KDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 D HAEI A+ + + + +YV L PC CA + + I+ + Y Sbjct: 57 LDTKYLYVCHAEINAVLN----KNSSDVKDCTMYVGLFPCNECAKVVIQSGIKTIIY 109 >gi|242278132|ref|YP_002990261.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio salexigens DSM 2638] gi|242121026|gb|ACS78722.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio salexigens DSM 2638] Length = 151 Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 28/130 (21%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAH-AEILAI 59 M + FM A A+ A VGAVAVL+ +I++ N TAH A++ I Sbjct: 5 MPWPDYFMRIAHLVAERATCTRRK-VGAVAVLDKRILASGYNGP---PSGTAHCADVGCI 60 Query: 60 RM-----------GCRILSQEI------------LPEVDLYVTLEPCTMCAAAISLARIR 96 R CR L E + ++Y T +PC +C + A + Sbjct: 61 REKMGVPSGERHELCRGLHAEQNVIIQCATHGVSMKGAEIYCTTQPCLICTKMLINAGVS 120 Query: 97 RLYYGASNPK 106 +YY S P Sbjct: 121 AIYYSESYPD 130 >gi|163745323|ref|ZP_02152683.1| CMP/dCMP deaminase, zinc-binding protein [Oceanibulbus indolifex HEL-45] gi|161382141|gb|EDQ06550.1| CMP/dCMP deaminase, zinc-binding protein [Oceanibulbus indolifex HEL-45] Length = 153 Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 32/91 (35%), Gaps = 19/91 (20%) Query: 26 VGAVAV-LNNKIISRAGN---RNRELKDVTA-------------HAEILAIRMGCRILSQ 68 VGAV V +++I + N R D HAE AI RI Sbjct: 29 VGAVIVGPDHEICATGYNGLPRGVASVDPARFDRASGEKFYWFEHAERNAIYNAARIGVP 88 Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 L +Y+ PC C AI I ++ Sbjct: 89 --LIGCTIYINRFPCADCTRAIIQCGIDKII 117 >gi|169623393|ref|XP_001805104.1| hypothetical protein SNOG_14935 [Phaeosphaeria nodorum SN15] gi|111056667|gb|EAT77787.1| hypothetical protein SNOG_14935 [Phaeosphaeria nodorum SN15] Length = 370 Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 36/123 (29%), Gaps = 33/123 (26%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN----------------R 45 FM A A + R VG V V +++S N Sbjct: 191 DQYFMQLADLAAHRSNCMKRR---VGCVIVREKRVVSTGYNGTPRGMTNCNEGGCPRCNN 247 Query: 46 ELKDVTA-------HAEILAIRMGCRILSQEILPE-VDLYVTLEPCTMCAAAISLARIRR 97 K T HAE A+ R + + LY PC C+ I+ I Sbjct: 248 AAKGGTGLNTCLCLHAEENALLEAGR----DRIGGSATLYCNTCPCLTCSVKITQVGISE 303 Query: 98 LYY 100 + Y Sbjct: 304 VVY 306 >gi|116748127|ref|YP_844814.1| zinc-binding CMP/dCMP deaminase [Syntrophobacter fumaroxidans MPOB] gi|116697191|gb|ABK16379.1| CMP/dCMP deaminase, zinc-binding [Syntrophobacter fumaroxidans MPOB] Length = 158 Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 45/134 (33%), Gaps = 41/134 (30%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-RNRELKDVTA-------- 52 K + AL AQ + GAV V +++IIS N R+ + Sbjct: 5 TKSEYYTEIALSVAQRSTCLRRR-FGAVIVKSDQIISTGYNGAPRKTANCIDLGYCARKQ 63 Query: 53 ---------------HAEILAIRMGCRILSQEILPEVDLYVTL------------EPCTM 85 HAE+ A+ R+ + DLY+ EPC + Sbjct: 64 LSIPAGQNYELCRAVHAEMNAVIHASRL----DMVGADLYLAGLDVETGNQVIHPEPCLL 119 Query: 86 CAAAISLARIRRLY 99 C I A I+R+ Sbjct: 120 CRRVIINAGIQRVV 133 >gi|224049770|ref|XP_002190430.1| PREDICTED: dCMP deaminase [Taeniopygia guttata] Length = 159 Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 40/116 (34%), Gaps = 31/116 (26%) Query: 8 MSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN------------------RNR 45 M+ A AQ + P VGA V NKI+ N Sbjct: 1 MAVAFLSAQRSKD----PSSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWTRTGANRL 56 Query: 46 ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + K HAE+ AI + + +YV L PC CA I A I+ + + Sbjct: 57 DTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIF 108 >gi|50288375|ref|XP_446616.1| hypothetical protein [Candida glabrata CBS 138] gi|49525924|emb|CAG59543.1| unnamed protein product [Candida glabrata] Length = 307 Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 35/120 (29%), Gaps = 29/120 (24%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50 FM A A + R VG V V ++I+ N R L + Sbjct: 159 DTYFMKLATLAASRSNCMKRR---VGCVIVRECRVIATGYNGTPRHLTNCFHGGCPRCND 215 Query: 51 ----------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE A+ R + LY PC C+ I I + Y Sbjct: 216 GDSKNLHTCLCLHAEENALLEAGRDRVGQN---ATLYCDTCPCLTCSVKIVQTGITEVVY 272 >gi|149917706|ref|ZP_01906202.1| Deoxycytidylate deaminase [Plesiocystis pacifica SIR-1] gi|149821488|gb|EDM80888.1| Deoxycytidylate deaminase [Plesiocystis pacifica SIR-1] Length = 154 Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKII-SRAGN-------------RNRELKDV-TAHAEILAIRMGCRILSQEI 70 VG V V ++ I S N ++R LK HAE AI RI Sbjct: 27 VGCVVVGPDREIRSAGFNGLPRGIEDSAKRLQDRALKYPLICHAEENAIMHAARIGVA-- 84 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L YVT PCT CA ++ A + + + Sbjct: 85 LKGCTAYVTWPPCTRCARSLIQAGVDEVVF 114 >gi|296418533|ref|XP_002838885.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634868|emb|CAZ83076.1| unnamed protein product [Tuber melanosporum] Length = 215 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 52/148 (35%), Gaps = 24/148 (16%) Query: 3 KGNVFMSCALEEAQNAALRNEIP----VGAVAVLN-NKIISRAGNRNRELKDVTAHAEIL 57 M+ AL A+ + IP VGA+ I+S +R HAE + Sbjct: 40 DHESLMTQALAIARKSTY---IPSAFCVGAIIATPSGDILSTGYSREHPGN---THAEQV 93 Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCT-------MCAAAISL-ARIRRLYYGASNPKGGG 109 AI S E +Y T+EPC+ C I A IRR+Y G P Sbjct: 94 AIDKLLSSSSTP--EEAVVYTTMEPCSKRLSGNKSCVDRILECAWIRRVYAGVMEPVDFV 151 Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRS 137 +G A ++ G E+ Sbjct: 152 ENSGKAKLEAAGV--GYQLVEG-LEEEC 176 >gi|118397|sp|P00814|DCTD_BPT2 RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP deaminase Length = 188 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 8/78 (10%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG-ASNPKGGGIE 111 HAE+ AI R S + +YVTL PC CA AI+ + I++L Y + G + Sbjct: 104 HAELNAILFAARNGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVYCETYDKNKPGWD 161 Query: 112 N-----GTQFYTLATCHH 124 + G + + + + Sbjct: 162 DILRNAGIEVFNVPKLNW 179 >gi|328850996|gb|EGG00155.1| hypothetical protein MELLADRAFT_112106 [Melampsora larici-populina 98AG31] Length = 304 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 28/61 (45%) Query: 69 EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128 +L + ++ T EPC C+ A+ +RI L+Y GG + F L +H + Sbjct: 229 YLLTNLVVFGTHEPCLCCSMALLHSRIHHLFYLLPVHGSGGCGSLWNFNNLNGLNHKFFV 288 Query: 129 Y 129 + Sbjct: 289 W 289 >gi|302914924|ref|XP_003051273.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256732211|gb|EEU45560.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 431 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 37/124 (29%), Gaps = 32/124 (25%) Query: 4 GNVFMSCALEEAQNA--ALRNEIPVGAVAV-LNNKIISRAGNRNREL------------K 48 FM A AQ + R VG V V ++IS N Sbjct: 231 DTYFMELASLAAQRSNCMKRR---VGCVLVGKERRVISTGYNGTPRGLLNCAEGGCPRCN 287 Query: 49 DVTA-----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97 D ++ HAE A+ R +E LY PC C+ I I Sbjct: 288 DASSSGVGLSTCLCIHAEENALLEAGRERIRE---GSVLYCDTCPCLTCSIKICQVGISE 344 Query: 98 LYYG 101 + Y Sbjct: 345 VVYA 348 >gi|258651000|ref|YP_003200156.1| riboflavin biosynthesis protein RibD [Nakamurella multipartita DSM 44233] gi|258554225|gb|ACV77167.1| riboflavin biosynthesis protein RibD [Nakamurella multipartita DSM 44233] Length = 366 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 38/119 (31%), Gaps = 20/119 (16%) Query: 8 MSCALEEAQNAALR---NEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGC 63 + A E A+ A N + VG V + + +R HAE+ A+ Sbjct: 14 LHRAAELAEYGAATALPNPV-VGCVLLAPGGWTVGEGYHRRPGG----PHAEVAALTAAG 68 Query: 64 RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQF 116 + V+LEPC C+ A+ A + R+ +P Sbjct: 69 -----PLARGGTAVVSLEPCNHTGRTGPCSQALIAAGVSRVIVAVRDPWPPAAGGVDHL 122 >gi|256544495|ref|ZP_05471868.1| cytidine/deoxycytidylate deaminase family protein [Anaerococcus vaginalis ATCC 51170] gi|256399820|gb|EEU13424.1| cytidine/deoxycytidylate deaminase family protein [Anaerococcus vaginalis ATCC 51170] Length = 146 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 45/126 (35%), Gaps = 34/126 (26%) Query: 1 MKKG-----NVFMSCALEEA-----QNAALRNEIPVGAVAVL-NNKIISRAGNRNR---- 45 M K F+ A A A VG V V N+IIS N + Sbjct: 1 MAKDRLTWNEYFIKLAHMVALRGTCDRAY------VGCVLVNGENRIISTGYNGSIKGNP 54 Query: 46 -------ELKD----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 ++D T HAE+ A+ + C + YVT PC C ++ A Sbjct: 55 HCDEVGHTMRDGHCIATIHAEMNAL-LYCAKEGIPV-KNSICYVTHFPCLNCTKSLIQAG 112 Query: 95 IRRLYY 100 I+ +YY Sbjct: 113 IKEIYY 118 >gi|325125125|gb|ADY84455.1| dCMP deaminase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 160 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 28/116 (24%) Query: 5 NVFMSCALEEAQN-----AALRNEIPVGAVAVLNNKIISRAGNRNRELKD---------- 49 FM AL AQ A VG+V V + +I+S N + +D Sbjct: 10 QYFMMQALVIAQRSTCDRAL------VGSVLVKDKRILSTGYNGSVSGQDHCDDVGHQLV 63 Query: 50 -----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H+E+ ++ + + ++YVT PC C + A + ++ Y Sbjct: 64 DGHCVRTIHSEMNSLISCAKNGVSTD--DTEIYVTHFPCYNCTKHLLQAGVIKINY 117 >gi|212697211|ref|ZP_03305339.1| hypothetical protein ANHYDRO_01779 [Anaerococcus hydrogenalis DSM 7454] gi|212675660|gb|EEB35267.1| hypothetical protein ANHYDRO_01779 [Anaerococcus hydrogenalis DSM 7454] Length = 146 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 45/126 (35%), Gaps = 34/126 (26%) Query: 1 MKKG-----NVFMSCALEEA-----QNAALRNEIPVGAVAVLN-NKIISRAGNRNR---- 45 M K F+ A A A VG V V N N+IIS N + Sbjct: 1 MAKDRLTWNEYFIKLAHMVALRGTCDRAY------VGCVLVNNENRIISTGYNGSIKGNP 54 Query: 46 -------ELKD----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94 ++D T HAE+ A+ + + YVT PC C ++ A Sbjct: 55 HCDEVGHTMRDGHCIATIHAEMNALLYCAKEGIS--VKNSICYVTHFPCLNCTKSLIQAG 112 Query: 95 IRRLYY 100 +R +YY Sbjct: 113 VREIYY 118 >gi|310796782|gb|EFQ32243.1| cytidine and deoxycytidylate deaminase zinc-binding region [Glomerella graminicola M1.001] Length = 436 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 55/179 (30%), Gaps = 62/179 (34%) Query: 3 KGN--VFMSCALEEAQNAALRNEIPVG----AVAV-LNNK---IISRA----GNR---NR 45 K ++M+ A A A VG AV V +++ A ++ Sbjct: 217 KDETSLWMTLAHRVALQARKAG---VGEAMGAVIVQREGGKSTLVAVAGDARWHQEPSRS 273 Query: 46 ELKDVTAHAEILAI------------RMGCRILSQEILP--------------------- 72 + AH + AI R+ S IL Sbjct: 274 GTGNPMAHCALRAISMVAQKLVRHERRVAGHSHSPPILEYDMFQDLPLVEDELTVYNDEH 333 Query: 73 ---------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122 +++Y+T EPC C+ I +R+ ++ + P GG+ + + + Sbjct: 334 PNTDGYLCHGMEMYLTHEPCVQCSMGILHSRMGKVVFAQRMPLTGGMCSEDRGHDHPEL 392 >gi|289644955|ref|ZP_06476996.1| CMP/dCMP deaminase zinc-binding [Frankia symbiont of Datisca glomerata] gi|289505228|gb|EFD26286.1| CMP/dCMP deaminase zinc-binding [Frankia symbiont of Datisca glomerata] Length = 224 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 47/127 (37%), Gaps = 33/127 (25%) Query: 4 GNVFMSCALEEAQN------AALRNEIPVGAVAVLNN---------KIISRAGNRNRELK 48 ++ A+E ++ A VGAV V + ++++ +R Sbjct: 68 DERWLRMAVEISRRCPPSPSAFS-----VGAVLVDRSAGLAADASARVLATGYSR---EL 119 Query: 49 DVTAHAEILAIRMGCRILSQEI---LPEVDLYVTLEPCT-------MCAAAISLARIRRL 98 D HAE +A+R + + LY +LEPC+ C I A IRR+ Sbjct: 120 DPRDHAEEVALRRLAQHAQDGPPVPAGSLTLYSSLEPCSARASRPRTCTELIIEAGIRRV 179 Query: 99 YYGASNP 105 + P Sbjct: 180 VFAWREP 186 >gi|195015670|ref|XP_001984248.1| GH15113 [Drosophila grimshawi] gi|193897730|gb|EDV96596.1| GH15113 [Drosophila grimshawi] Length = 194 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 32/124 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-------------- 42 ++ + FM+ A+ ++ + P VGA V + +I++ N Sbjct: 31 LQWDDYFMATAILSSKRSKD----PSTQVGACIVDKHKRIVAIGYNGFPRNCSDDVFPWS 86 Query: 43 -----RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96 + E K++ HAE AI G + L LY TL PC C I + IR Sbjct: 87 KDSDSDSIENKNMYVVHAEANAILNG----NGASLDGTRLYTTLFPCNECTKLIIQSGIR 142 Query: 97 RLYY 100 + Y Sbjct: 143 NILY 146 >gi|269796889|ref|YP_003316344.1| riboflavin biosynthesis protein RibD [Sanguibacter keddieii DSM 10542] gi|269099074|gb|ACZ23510.1| riboflavin biosynthesis protein RibD [Sanguibacter keddieii DSM 10542] Length = 372 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 38/124 (30%), Gaps = 30/124 (24%) Query: 8 MSCALEEAQN---AALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63 MS ALE A+ AA G V + + ++ A TA A+ Sbjct: 23 MSRALELAREDRLAASLGPRG-GCVLLGADGTVLGEARTDRVARVHATA----QALAEAG 77 Query: 64 RILSQEILPEVDLYVTLEPCT----------------MCAAAISLARIRRLYYGASNPKG 107 VTLEPC CA A+ A +RR+ +P Sbjct: 78 H-----RAQGATAVVTLEPCCLGGDARATGPSPLPHGPCAQALVDAGVRRVVVAHLDPDP 132 Query: 108 GGIE 111 G Sbjct: 133 GTSG 136 >gi|167849555|ref|ZP_02475063.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei B7210] gi|167922717|ref|ZP_02509808.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei BCC215] Length = 94 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 32/96 (33%), Gaps = 17/96 (17%) Query: 4 GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61 M+ AL A+ VG V + + +R HAE+ A+R Sbjct: 8 DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALRE 63 Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAIS 91 E YVTLEPC CA A+ Sbjct: 64 AG-----ERARGATAYVTLEPCAHFGRTPPCANALV 94 >gi|104773493|ref|YP_618473.1| putative dCMP deaminase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422574|emb|CAI97177.1| Putative dCMP deaminase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 160 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 28/116 (24%) Query: 5 NVFMSCALEEAQN-----AALRNEIPVGAVAVLNNKIISRAGNRNRELKD---------- 49 FM AL AQ A VG+V V + +I+S N + +D Sbjct: 10 QYFMMQALVIAQRSTCDRAL------VGSVLVKDKRILSTGYNGSVSGQDHCDDVGHQLV 63 Query: 50 -----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H+E+ ++ + + ++YVT PC C + A + ++ Y Sbjct: 64 DGHCVRTIHSEMNSLISCAKNGVSTD--DTEIYVTHFPCYNCTKHLLQAGVIKINY 117 >gi|111024118|ref|YP_707090.1| riboflavin biosynthesis protein RibD [Rhodococcus jostii RHA1] gi|110823648|gb|ABG98932.1| riboflavin biosynthesis protein RibD [Rhodococcus jostii RHA1] Length = 350 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 46/137 (33%), Gaps = 23/137 (16%) Query: 8 MSCALEEAQNA--ALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64 M A+ A++A VGAV + +I + HAE++A+R Sbjct: 14 MQIAIGAAESARGFTSPNPAVGAVVLDAAGRIAGVGMTQPPGG----PHAEVVALREAGD 69 Query: 65 ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118 VTLEPC C+ A+ A + ++Y +P + Sbjct: 70 AA-----RGGTAVVTLEPCNHHGRTGPCSQALLDAGVVAVHYAVGDPNPEAAGGAETLIS 124 Query: 119 LATCHHSPEIYPGISEQ 135 E+ G+ Q Sbjct: 125 A-----GVEVTSGLRAQ 136 >gi|293376240|ref|ZP_06622483.1| cytidine and deoxycytidylate deaminase zinc-binding region [Turicibacter sanguinis PC909] gi|292645132|gb|EFF63199.1| cytidine and deoxycytidylate deaminase zinc-binding region [Turicibacter sanguinis PC909] Length = 157 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 40/122 (32%), Gaps = 31/122 (25%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-------------- 42 + FM AL A + P VGA V ++I+ N Sbjct: 6 LSWDEYFMGIALLSAMRSKD----PQTQVGACIVNEEHRIVGIGYNGFPHGCKDEEFPWE 61 Query: 43 ---RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 K HAE AI + S L LYV+L PC CA I + I + Sbjct: 62 REGEFINTKYPYVVHAEQNAI-----LNSTTSLKHCRLYVSLFPCHECAKYIIQSGINEI 116 Query: 99 YY 100 Y Sbjct: 117 VY 118 >gi|237843195|ref|XP_002370895.1| Cytidine and deoxycytidylate deaminase zinc-binding domain-containing protein [Toxoplasma gondii ME49] gi|211968559|gb|EEB03755.1| Cytidine and deoxycytidylate deaminase zinc-binding domain-containing protein [Toxoplasma gondii ME49] Length = 178 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126 +Y + EPC +CA A+ +RI+ L++ N GGI G + + +H Sbjct: 102 GNYYCQGCVVYCSHEPCVLCAMALIHSRIKLLFFVHDNNVHGGITRG-RLHLDRRLNHGY 160 Query: 127 EI 128 + Sbjct: 161 RV 162 >gi|296111710|ref|YP_003622092.1| dCMP deaminase [Leuconostoc kimchii IMSNU 11154] gi|295833242|gb|ADG41123.1| dCMP deaminase [Leuconostoc kimchii IMSNU 11154] Length = 160 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 17/90 (18%) Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTA--HAEILAIRMGCRILSQEI 70 VGAV V NN+II+ N HAE A+ ++ Sbjct: 30 VGAVIVQNNRIITSGYNGAVSGTPHCTDVGDLIVDGHCIRAVHAEQNALMQAAQMGIS-- 87 Query: 71 LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 + ++YVT PC C + A I ++ + Sbjct: 88 VDGAEVYVTDVPCIHCTKLLLQAGISKINF 117 >gi|153812522|ref|ZP_01965190.1| hypothetical protein RUMOBE_02921 [Ruminococcus obeum ATCC 29174] gi|149831447|gb|EDM86535.1| hypothetical protein RUMOBE_02921 [Ruminococcus obeum ATCC 29174] Length = 146 Score = 59.5 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 35/97 (36%), Gaps = 23/97 (23%) Query: 26 VGAVAVL-NNKIISRAGNRN-----------RELKDVT-------AHAEILAIRMGCRIL 66 VGA V +NKI+S N D H+E+ AI Sbjct: 18 VGACIVSNDNKILSMGYNGFPKGCSDDEFPWAREGDPLDTKYLYVTHSELNAILN----Y 73 Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103 L LYV+L PC CA AI A I+ + Y Sbjct: 74 RGGSLEGAKLYVSLFPCNECAKAIIQAGIKTVVYDCD 110 >gi|116326433|ref|YP_803153.1| dCMP deaminase [Enterobacteria phage RB32] gi|228861145|ref|YP_002854168.1| dCMP deaminase [Enterobacteria phage RB51] gi|228861526|ref|YP_002854547.1| dCMP deaminase [Enterobacteria phage RB14] gi|115344026|gb|ABI95035.1| dCMP deaminase [Enterobacteria phage RB32] gi|227438542|gb|ACP30855.1| dCMP deaminase [Enterobacteria phage RB14] gi|227438819|gb|ACP31131.1| dCMP deaminase [Enterobacteria phage RB51] gi|291290435|dbj|BAI83230.1| dCMP deaminase [Enterobacteria phage AR1] Length = 193 Score = 59.5 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 HAE+ AI R S + +YVTL PC CA AI+ + I++L Y + K Sbjct: 104 HAELNAILFAARNGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVYCETYDKN 156 >gi|325684667|gb|EGD26821.1| deoxycytidylate deaminase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 160 Score = 59.5 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 28/116 (24%) Query: 5 NVFMSCALEEAQN-----AALRNEIPVGAVAVLNNKIISRAGNRNRELKD---------- 49 FM AL AQ A VG+V V + +I+S N + +D Sbjct: 10 QYFMMQALVIAQRSTCDRAL------VGSVLVKDKRILSTGYNGSVSGQDHCDDVGHQLV 63 Query: 50 -----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 T H+E+ ++ + ++YVT PC C + A + ++ Y Sbjct: 64 DGHCVRTIHSEMNSLISCAKNGVSTD--NTEIYVTHFPCYNCTKHLLQAGVTKINY 117 >gi|20806677|ref|NP_621848.1| deoxycytidylate deaminase [Thermoanaerobacter tengcongensis MB4] gi|20515128|gb|AAM23452.1| Deoxycytidylate deaminase [Thermoanaerobacter tengcongensis MB4] Length = 168 Score = 59.5 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 35/98 (35%), Gaps = 25/98 (25%) Query: 26 VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62 VGA+ V++ IIS N +L HAE AI Sbjct: 48 VGAILVVDKHIISTGYNGPPTGLPHCEETGCLRDQLGIPPGERPELCRGVHAEQNAIIQA 107 Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 L LYV+ PC +CA + A ++R+ Y Sbjct: 108 A--LHGVSTKGATLYVSASPCVICAKMLINAGVKRIVY 143 >gi|38640200|ref|NP_944156.1| Cd dCMP deaminase [Aeromonas phage Aeh1] gi|33414885|gb|AAQ17928.1| Cd dCMP deaminase [Aeromonas phage Aeh1] Length = 182 Score = 59.5 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 45/145 (31%), Gaps = 44/145 (30%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---LKDVTA------- 52 K F+ A AQ + VGA+ +++ IS N D A Sbjct: 2 KTTTFLQNAFLVAQESKCV-SYRVGAIISKDDRPISSGYNGTISGQPNCDEVAEENGWAE 60 Query: 53 ------------------------------HAEILAIRMGCRILSQEILPEVDLYVTLEP 82 HAE+ AI + + +Y T+ P Sbjct: 61 YVDVPGVGKELRLRQDRSDEYSAWAKSNVIHAEMNAILFAA--HGGKSIEGATMYCTMAP 118 Query: 83 CTMCAAAISLARIRRLYYGASNPKG 107 C CA I+ A+I+ L Y + G Sbjct: 119 CPECAKTIAQAKIKTLVY-CEDYNG 142 >gi|227833015|ref|YP_002834722.1| riboflavin biosynthesis protein ribD [Corynebacterium aurimucosum ATCC 700975] gi|227454031|gb|ACP32784.1| riboflavin biosynthesis protein ribD [Corynebacterium aurimucosum ATCC 700975] Length = 332 Score = 59.5 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 43/122 (35%), Gaps = 23/122 (18%) Query: 8 MSCALEEAQNAAL--RN----EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60 M AL A A R PVGAV + + +++ + HAE++A+R Sbjct: 1 MR-ALHVAMGAGEQVRGTTSPNPPVGAVILDSAGQVVGVGATQPPGG----PHAEVMALR 55 Query: 61 MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114 VTLEPC CA A+ A + +YY +P T Sbjct: 56 DAGDKA-----RGGTAVVTLEPCNHTGRTGPCAQALIDASVAAVYYLHPDPTPQAGGGST 110 Query: 115 QF 116 Sbjct: 111 TL 112 >gi|111224596|ref|YP_715390.1| putative riboflavin/cytosine deaminase [Frankia alni ACN14a] gi|111152128|emb|CAJ63855.1| Putative riboflavin/cytosine deaminase [Frankia alni ACN14a] Length = 187 Score = 59.5 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 44/140 (31%), Gaps = 44/140 (31%) Query: 2 KKGNVFMSCALEEAQN------AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHA 54 + +++ A+E + A VGA+ V + ++ +R E D HA Sbjct: 17 DRDRYWLARAVELGRRCPPSSTAYS-----VGALIVAADGTPLAEGYSRAEEPHD---HA 68 Query: 55 EILAIRMGCRILSQEIL----------------------PEVDLYVTLEPC-------TM 85 E +A+R L +Y +LEPC Sbjct: 69 EEVALRRLAARLDASAAGGDPGGGVDSGGGGDPGVGVDPAGATVYSSLEPCSARASRPWT 128 Query: 86 CAAAISLARIRRLYYGASNP 105 C I A I R+ + P Sbjct: 129 CTELILAAGIGRVVFAWREP 148 >gi|291521321|emb|CBK79614.1| Deoxycytidylate deaminase [Coprococcus catus GD/7] Length = 161 Score = 59.5 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 58/156 (37%), Gaps = 35/156 (22%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + FM A + A LR++ P VG+ V +NKI+S N Sbjct: 9 ISWDEYFMGVA----KLAGLRSKDPNSQVGSCIVSPDNKILSIGYNGFPRGCSDDVFPWS 64 Query: 43 RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 R + D H+E+ AI L +YV+L PC C+ AI + IR + Sbjct: 65 REGDELDTKYFYVTHSELNAILN----YRGGSLEGSKIYVSLFPCNECSKAIIQSGIREI 120 Query: 99 YYGASNPKGG---GIENGTQFYTLATCHHSPEIYPG 131 Y + K G + + A H+ I G Sbjct: 121 IY--DSDKYGDTPAVIASRKMLDAAGVHYRRYIRSG 154 >gi|330858731|ref|YP_004415106.1| putative deoxycytidylate deaminase [Shigella phage Shfl2] gi|327397665|gb|AEA73167.1| putative deoxycytidylate deaminase [Shigella phage Shfl2] Length = 193 Score = 59.5 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 HAE+ AI R S + +YVTL PC CA AI+ + I++L Y + K Sbjct: 104 HAELNAILFAARNGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVYCETYDKN 156 >gi|255715123|ref|XP_002553843.1| KLTH0E08448p [Lachancea thermotolerans] gi|238935225|emb|CAR23406.1| KLTH0E08448p [Lachancea thermotolerans] Length = 323 Score = 59.5 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 58/147 (39%), Gaps = 30/147 (20%) Query: 12 LEEAQNAALRNEIPVGAVAV------LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65 L A+ A+ + A V NN++I + +R+ H+ + IR + Sbjct: 172 LSLAEQASGKQ-----AAVVSAFVNPKNNEVIFVSDHRHV--CSPLDHSIMRGIRSVAEL 224 Query: 66 LS-------------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112 + + D+Y T EPC+MC+ A+ +RI+R Y K G +E+ Sbjct: 225 EHQKKQDHTNKGESETYLCLDFDVYTTHEPCSMCSMALIHSRIKRCIYLTPMNKTGCLES 284 Query: 113 ----GTQFYTLATCHHSPEIYPGISEQ 135 G + + + E + I ++ Sbjct: 285 ESGDGYCMHNNHSLNSKYEAFRWIGDE 311 >gi|260940691|ref|XP_002614645.1| hypothetical protein CLUG_05423 [Clavispora lusitaniae ATCC 42720] gi|238851831|gb|EEQ41295.1| hypothetical protein CLUG_05423 [Clavispora lusitaniae ATCC 42720] Length = 323 Score = 59.5 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 18/131 (13%) Query: 24 IPVGAVAVLN----NKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-------- 70 +P+ + +I I N +R+ H+ + I M ++ Sbjct: 185 VPITTIIARKDDLTGEIQILFTANDSRDKH-PLEHSVMKGISMVAEDERRKRSVEKEPDL 243 Query: 71 ---LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127 ++ +Y T EPCTMCA A+ +RIR+L Y +PK GGI++ + + + Sbjct: 244 GYLCRDLLIYTTHEPCTMCAMALVHSRIRQLIYVYDHPK-GGIQSSYFIGDRRDLNWTYD 302 Query: 128 IYPGISEQRSR 138 I+ + E + Sbjct: 303 IWKWVGEIPCQ 313 >gi|312222461|emb|CBY02401.1| similar to deoxycytidylate deaminase [Leptosphaeria maculans] Length = 357 Score = 59.5 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 37/120 (30%), Gaps = 27/120 (22%) Query: 4 GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---TA- 52 FM A + A + + + VG V ++IS N + + TA Sbjct: 198 DQYFMQLA-DLAAHRSNCMKRRVGCCIVREKRVISTGYNGTPRGMPNSIQGGCPRCNTAT 256 Query: 53 ------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE A+ R I LY PC C+ I I + Y Sbjct: 257 PGPHTLSTCLCLHAEENALLEAGR---DRIAANAILYCNTCPCLTCSVKIVQVGIGEVVY 313 >gi|308814577|ref|YP_003934851.1| dCMP deaminase [Shigella phage SP18] gi|308206169|gb|ADO19568.1| dCMP deaminase [Shigella phage SP18] Length = 193 Score = 59.2 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 HAE+ AI R+ S + +YVTL PC CA AIS + I++L Y + K Sbjct: 104 HAELNAILFAARMGSS--IEGATMYVTLSPCPDCAKAISQSGIKKLVYCETYDKN 156 >gi|242309140|ref|ZP_04808295.1| riboflavin biosynthesis protein RibD [Helicobacter pullorum MIT 98-5489] gi|239524181|gb|EEQ64047.1| riboflavin biosynthesis protein RibD [Helicobacter pullorum MIT 98-5489] Length = 343 Score = 59.2 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 35/138 (25%) Query: 5 NVFMSCALEEAQNAALRN--EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61 ++++ A++EA + VGA + N K++S N ++E HAE+LA++ Sbjct: 4 SLYLELAIKEAWKTQCQTLPNPAVGAAILDKNGKLLSI--NAHQEAGKP--HAEVLALKN 59 Query: 62 G----------------------CRILSQEILPEVDLYVTLEPC------TMCAAAISLA 93 + +++I LY TLEPC CA+ I Sbjct: 60 AYFHLTQDSAILSLQESHQIHQYLKQNAKDIFHNSTLYTTLEPCMHEGKTPSCASLIKSL 119 Query: 94 RIRRLYYGASNPKGGGIE 111 I+ L A +P Sbjct: 120 GIKNLVVAAKDPNPKAQG 137 >gi|315652209|ref|ZP_07905204.1| deoxycytidylate deaminase [Eubacterium saburreum DSM 3986] gi|315485515|gb|EFU75902.1| deoxycytidylate deaminase [Eubacterium saburreum DSM 3986] Length = 164 Score = 59.2 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 50/131 (38%), Gaps = 35/131 (26%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42 + F+ A A+ + P VGA V +NKI+S N Sbjct: 9 INWDEYFIGVAKLSAKRSKD----PNTQVGACIVSEDNKILSMGYNGFPRGCSDEEFPWG 64 Query: 43 RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95 ++ E+ D + H+E+ AI L +YVTL PC CA AI A I Sbjct: 65 KDLEISDPYNAKYLYSTHSELNAILN----YRGGSLEGSKIYVTLFPCNECAKAIIQAGI 120 Query: 96 RRLYYGASNPK 106 + + Y + K Sbjct: 121 KTIIY--EDDK 129 >gi|239905201|ref|YP_002951940.1| putative dCMP deaminase [Desulfovibrio magneticus RS-1] gi|239795065|dbj|BAH74054.1| putative dCMP deaminase [Desulfovibrio magneticus RS-1] Length = 153 Score = 59.2 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 32/128 (25%) Query: 5 NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNRELK 48 + FM A A+ + R VGAVAV + +I++ N +L Sbjct: 9 DYFMRIAYLVAERSTCLRRK---VGAVAVRDRRILATGYNGSPTGTAHCLDIGCLREKLG 65 Query: 49 DVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 + HAE I C + I D+Y T +PC +C + +++ +Y Sbjct: 66 IPSGERHELCRGLHAEQNVIIQ-CALHGVPI-AGADIYCTTQPCLICTKMLINSQVNHIY 123 Query: 100 Y--GASNP 105 + G +P Sbjct: 124 FSQGYPDP 131 >gi|85710330|ref|ZP_01041395.1| riboflavin-specific deaminase/reductase [Erythrobacter sp. NAP1] gi|85689040|gb|EAQ29044.1| riboflavin-specific deaminase/reductase [Erythrobacter sp. NAP1] Length = 315 Score = 59.2 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 35/95 (36%), Gaps = 17/95 (17%) Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83 V A+ V N +I+R HAE +A+ LYVTLEPC Sbjct: 21 VAALLVQGNCVIARGW----TQGGGRPHAEAIAL--AGIAEGGA--KGATLYVTLEPCAH 72 Query: 84 -----TMCAAAISLARIRRLYYGA--SNPKGGGIE 111 C + AR R+ G +P+ G+ Sbjct: 73 QSQRGPACTDLVIAARPSRVVIGQLDPDPRTAGLG 107 >gi|320353575|ref|YP_004194914.1| dCMP deaminase [Desulfobulbus propionicus DSM 2032] gi|320122077|gb|ADW17623.1| dCMP deaminase [Desulfobulbus propionicus DSM 2032] Length = 164 Score = 59.2 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 39/122 (31%), Gaps = 30/122 (24%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-------------- 42 + FM+ A+ + P VGA NKI+ N Sbjct: 9 LSWDEYFMAVAILSGHRSKD----PNTQVGACVANSQNKIVGVGYNGFPWGCSDDELPWS 64 Query: 43 RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98 R D HAE+ A+ L + LYV L PC C I A IR + Sbjct: 65 REGSYLDTKYPYVCHAELNAVLN----SITYDLRDCRLYVALFPCNECTKVIIQAGIREI 120 Query: 99 YY 100 Y Sbjct: 121 IY 122 >gi|126178835|ref|YP_001046800.1| CMP/dCMP deaminase, zinc-binding [Methanoculleus marisnigri JR1] gi|125861629|gb|ABN56818.1| CMP/dCMP deaminase, zinc-binding protein [Methanoculleus marisnigri JR1] Length = 173 Score = 59.2 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 41/134 (30%), Gaps = 42/134 (31%) Query: 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN---RNRELKD-------- 49 + +M A+E A+ + GAV V +I+S N R D Sbjct: 16 SRTEWYMGIAVETARRSTCIRRC-YGAVVVNSAGEIVSTGHNGAPRGEAHCDELNTCIRK 74 Query: 50 -------------VTAHAEILAIRMGCRILSQEILPEVDLYVTLE-----------PCTM 85 + HAE+ A+ R +Y+ PC M Sbjct: 75 QYNIPSGERYEFCRSVHAEMNALLQAGRAA-----AGCTMYLAGFERLTGAPSYDPPCLM 129 Query: 86 CAAAISLARIRRLY 99 C+ + A I R+ Sbjct: 130 CSKMLVNAGIDRVV 143 >gi|9632715|ref|NP_049828.1| Cd dCMP deaminase [Enterobacteria phage T4] gi|118398|sp|P16006|DCTD_BPT4 RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP deaminase; Short=dCD gi|5354339|gb|AAD42546.1|AF158101_133 Cd dCMP deaminase [Enterobacteria phage T4] gi|215838|gb|AAA32489.1| deoxycytidylate deaminase (EC 3.5.4.12) [Enterobacteria phage T4] gi|299780576|gb|ADJ39938.1| deoxycytidylate deaminase [Enterobacteria phage T4T] Length = 193 Score = 59.2 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 53 HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107 HAE+ AI R S + +YVTL PC CA AI+ + I++L Y + K Sbjct: 104 HAELNAILFAARNGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVYCETYDKN 156 >gi|291276854|ref|YP_003516626.1| putative priboflavin-specific deaminase [Helicobacter mustelae 12198] gi|290964048|emb|CBG39888.1| putative priboflavin-specific deaminase [Helicobacter mustelae 12198] Length = 345 Score = 59.2 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 60/177 (33%), Gaps = 45/177 (25%) Query: 1 MKKGNVFMSCALEEAQN--AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEIL 57 M + MS +++A V A+ V +I+S ++ K HAE+L Sbjct: 1 MLSHQLLMSLCIKKAWEFQTLTLPNPAVAAMVVSGEGEILSLCAHQ----KSGAPHAEVL 56 Query: 58 AIRMG----------------------CRILSQEILPEVDLYVTLEPC------TMCAAA 89 +++ R Q + + +YVTLEPC CA Sbjct: 57 SLKEAYYKLTKDENIKNITNSQELHQILRNHHQNLFKDCSIYVTLEPCTCYGKTPPCAEI 116 Query: 90 ISLARIRRLYYGA--SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144 + I+ + GA S GG E + + I E+ + ++ F Sbjct: 117 LQSIGIKSVIIGALESTKNQGGKEMLEK--------SGARVTARILEKECQDLLLPF 165 >gi|195431281|ref|XP_002063675.1| GK15805 [Drosophila willistoni] gi|194159760|gb|EDW74661.1| GK15805 [Drosophila willistoni] Length = 352 Score = 59.2 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 65 ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 + D+Y+ EPC MC+ A+ +R +R+++ ++ G + Q +T+ +H Sbjct: 280 KYGPYLCTGYDVYLLQEPCLMCSMALVHSRAKRIFFLQTSDN-GALLTRFQLHTVKELNH 338 Query: 125 SPEIY 129 E++ Sbjct: 339 HYEVF 343 >gi|91218013|ref|ZP_01254965.1| deoxycytidylate deaminase [Psychroflexus torquis ATCC 700755] gi|91183871|gb|EAS70262.1| deoxycytidylate deaminase [Psychroflexus torquis ATCC 700755] Length = 143 Score = 59.2 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 40/112 (35%), Gaps = 15/112 (13%) Query: 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV--------- 50 +K ++ A E + + + + VGA+ V + IIS N + Sbjct: 7 LKFDKAYLRMAREWGKLSHCQRKQ-VGAIIVKDRMIISDGFNGTPSGFNNACEDKEGLTK 65 Query: 51 --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 HAE AI LY+ L PC C+ I A I R+ Y Sbjct: 66 WYVLHAEANAILKVAASTQSS--KNATLYINLSPCKECSKLIHQAGIIRVVY 115 >gi|312262684|gb|ADQ52979.1| Cd dCMP deaminase [Aeromonas phage PX29] Length = 182 Score = 59.2 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 44/145 (30%), Gaps = 44/145 (30%) Query: 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---LKDVTA------- 52 K F+ A AQ + VGA+ +++ IS N D A Sbjct: 2 KTTTFLQKAFLVAQESKCV-SYRVGAIISKDDRPISSGYNGTISGQPNCDEVAEENGWAE 60 Query: 53 ------------------------------HAEILAIRMGCRILSQEILPEVDLYVTLEP 82 HAE+ AI + +Y T+ P Sbjct: 61 YVNVPGVGTELRLRQDKSDEYSAWAKSNVIHAEMNAILFAANSGKP--IEGATMYCTMAP 118 Query: 83 CTMCAAAISLARIRRLYYGASNPKG 107 C CA I+ A+I+ L Y + G Sbjct: 119 CPECAKTIAQAKIKTLVY-CEDYNG 142 >gi|45199011|ref|NP_986040.1| AFR493Cp [Ashbya gossypii ATCC 10895] gi|44985086|gb|AAS53864.1| AFR493Cp [Ashbya gossypii ATCC 10895] Length = 324 Score = 59.2 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 30/120 (25%) Query: 36 IIS---RAGNRNRELKDVTAHAEILAIRMGCR----------------ILSQEILPEVDL 76 II+ R GN H+ + I+ R + + D+ Sbjct: 197 IIAVDQRGGN-------PLHHSIMNGIKEVARDELQRREAVERGTSVGRTDTYLCLDFDV 249 Query: 77 YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLATCHHSPEIYPGI 132 Y T EPC+MCA A+ +RI+R + P+ G + +G ++ + E++ + Sbjct: 250 YTTHEPCSMCAMALIHSRIKRCIFIQPMPETGALRPESGDGYCMHSSKALNSKYEVFQWV 309 >gi|317154506|ref|YP_004122554.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio aespoeensis Aspo-2] gi|316944757|gb|ADU63808.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio aespoeensis Aspo-2] Length = 152 Score = 59.2 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 43/120 (35%), Gaps = 28/120 (23%) Query: 5 NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL-AIR--- 60 FM A AQ + VGA+AV +I++ N AH E + IR Sbjct: 9 EYFMRIAHLVAQRSTCTR-RAVGAIAVRGKRILATGYNGVPTN---IAHCEEVGCIRDKL 64 Query: 61 --------MGCRILSQE------------ILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 CR L E L D+Y T +PC +C + +R +Y+ Sbjct: 65 KIPSGERHELCRGLHAEQNVIIQAATHHLDLTGCDIYCTTKPCILCTKMLINCEVRNIYF 124 >gi|326536808|ref|YP_004301240.1| dCMP deaminase [Aeromonas phage 65] gi|312263154|gb|ADQ53410.1| dCMP deaminase [Aeromonas phage 65] Length = 179 Score = 59.2 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 36/110 (32%), Gaps = 37/110 (33%) Query: 26 VGAVAVLNNKIISRAGNRNRELK-DVTAHA------------------------------ 54 VG V V N ++IS N R + HA Sbjct: 24 VGTVIVKNGRVISTGYNGTRAGGINPDEHAINMGWAERAVDGVRLYPKYEDEYSSWANTH 83 Query: 55 ----EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100 E+ A+ R + L +L PC+ CA ++ A I+++ Y Sbjct: 84 VIHSEMNALLYAARSGQS--VDGATLVTSLSPCSNCAKHMAAAGIKKVIY 131 >gi|155370644|ref|YP_001426178.1| hypothetical protein FR483_N546L [Paramecium bursaria Chlorella virus FR483] gi|155123964|gb|ABT15831.1| hypothetical protein FR483_N546L [Paramecium bursaria Chlorella virus FR483] Length = 144 Score = 59.2 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 39/108 (36%), Gaps = 16/108 (14%) Query: 6 VFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGN--------RNRELKDVTA---- 52 ++ A +AQ + V A+ + NN+ I S N T Sbjct: 8 KYLQLAEFQAQLFSKDESTKVAALVLDNNQNIRSTGFNGLPRGFEETTERWSKPTKYDYV 67 Query: 53 -HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99 HAE AI R + L L+ TL PC CA I A I ++ Sbjct: 68 VHAEANAICSAARNGAT--LAGCTLFSTLFPCNECAKLIIQAGIAKIV 113 >gi|326426566|gb|EGD72136.1| riboflavin biosynthesis protein RibA [Salpingoeca sp. ATCC 50818] Length = 1091 Score = 59.2 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 4 GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60 +FM AL A+ + P VG V V + +I +R + HAEI A+ Sbjct: 580 DELFMRRALSLARLGRVSA-PPNPWVGCVLVRDGHVIGEGYHRRAGM----PHAEIEAMA 634 Query: 61 MG 62 Sbjct: 635 DA 636 Score = 54.1 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 10/85 (11%) Query: 71 LPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124 L YVTLEPC C A+ A + R ++P G F Sbjct: 713 LAGATAYVTLEPCHHQGRTGPCDQALVQAGVARTVIAVTDPDERVSARGLAFLRSRG--- 76