>gnl|CDD|161819 TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD. This model describes the ribD protein as found in Escherichia coli. The N-terminal domain includes the conserved zinc-binding site region captured in the model dCMP_cyt_deam and shared by proteins such as cytosine deaminase, mammalian apolipoprotein B mRNA editing protein, blasticidin-S deaminase, and Bacillus subtilis competence protein comEB. The C-terminal domain is homologous to the full length of yeast HTP reductase, a protein required for riboflavin biosynthesis. A number of archaeal proteins believed related to riboflavin biosynthesis contain only this C-terminal domain and are not found as full-length matches to this model. Length = 344

 Score = 53.3 bits (128), Expect = 2e-08
 Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 21/116 (18%)

Query: 8   MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+ A+           VG V V N +I+    +     K    HAE+ A+R     
Sbjct: 1   MNRALDLAKKGQGTTHPNPLVGCVIVKNGEIVGEGAH----QKAGEPHAEVHALRQ---- 52

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111
            + E       YVTLEPC+       CA AI  A I+++     +P     G G E
Sbjct: 53  -AGENAKGATAYVTLEPCSHQGRTPPCAEAIIEAGIKKVVVSMQDPNPLVAGRGAE 107