HHsearch alignment for GI: 255764465 and conserved domain: PRK09560
>PRK09560 nhaA pH-dependent sodium/proton antiporter; Reviewed.
Probab=100.00 E-value=0 Score=972.16 Aligned_cols=377 Identities=36% Similarity=0.693 Sum_probs=363.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 51478985321557999999999999833871243334311243356769999876799999999999999998648678
Q gi|255764465|r 2 TKNKFFLYRDNFTGILLISTTFITMILANISFSSAYYFDALEYKIANLTLRDWVNDILMILYFFMIGLELKHELIHGELS 81 (382)
Q Consensus 2 ~k~k~F~~~e~~~gilLl~aa~~Al~~ANs~~~~~y~~~~~~~~~~~~~l~~wvNDgLMaiFFf~vGLEiKrE~~~GeLs 81 (382)
T Consensus 3 ~~~~~fl~~e~~~GilLl~a~~~Ali~ANs~~~~~Y~~~-~~~~~~~~~l~~wiNDgLMaiFFf~vGLEiKrE~~~GeL~ 81 (382)
T PRK09560 3 DVIRDFFKMESAGGILLVIAAAIAMVIANSPLGEMYQAF-LHTYVFGMSVSHWINDGLMAVFFLLIGLEVKRELLEGALK 81 (382)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH-HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 699999871325799999999999999868448999999-8522036669999977899999999999999998548679
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998999999877889999998982379800035045533773789999999842788899999999999875447998
Q gi|255764465|r 82 SWTKRSLPLLGAIGGITFPACIYMIINCHTEIYLKGWAIPTATDIAFTLGILSWIGPNIPSSLKIFFTALTMIDDFSAIA 161 (382)
Q Consensus 82 ~~r~a~lP~~AAlGGmi~Paliy~~~n~~~~~~~~GWaIP~ATDiAFalgvl~llg~rvp~~lrvFLlaLAIvDDlgaIl 161 (382)
T Consensus 82 ~~~~a~lPi~AA~GGm~~PAlIY~~~n~~~~~~~~GW~IP~ATDIAFalgvlallg~rvP~~lr~FLlaLAIvDDlgaI~ 161 (382)
T PRK09560 82 SKETAIFPAIAAVGGMLAPALIYVAFNFNDPEAISGWAIPAATDIAFALGIMALLGKRVPVSLKVFLLALAIIDDLGVVV 161 (382)
T ss_pred CHHHHHHHHHHHHHCCHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCE
T ss_conf 87888888999980440988888113158831026513246017999999999965768879999999999986200215
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 88864177666799999999999999986259861237899999999999712865678988886317678777894000
Q gi|255764465|r 162 IMAIFYTQSLNLFALQVAITLIFLLFLLNRCGFTNLFIYGFLGFFLWHSIFKSGIHTTVFGVIMALLLPDIKNYHSPSNR 241 (382)
Q Consensus 162 VIAifYs~~i~~~~L~~a~~~~~~l~~l~~~~v~~~~~y~~~g~~lW~~~~~sGIHaTiAGV~l~~~iP~~~~~~~~~~~ 241 (382)
T Consensus 162 VIA~FYt~~i~~~~L~~a~~~~~~l~~l~~~~v~~~~~y~~~G~~lW~~~~~SGiHaTiAGV~la~~iP~~~~~~---~~ 238 (382)
T PRK09560 162 IIALFYSSDLSTLALTVGFAMTGVLFMLNAKHVTKLSWYLIVGFILWVAVLKSGVHATLAGVVIGFAIPLKGKKG---EH 238 (382)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC---CC
T ss_conf 888750898779999999999999999985388621799999999999999705429999999995067777778---88
Q ss_pred CHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
Q ss_conf 03788763420443247879998851263246764787310269999999864455899999999996175438999899
Q gi|255764465|r 242 ISFYLLGDGLKSWVMPLVLPAFVFVNTGLTISTIPYTDISDPIVWGVMLGLFLGKQSGIFLFAFSTVKIGWGKLPKDTNW 321 (382)
Q Consensus 242 ~~~~~le~~l~p~v~~~IlPlFAfaNaGV~l~~~~~~~~~~pv~~gI~~gL~iGK~lGI~~~s~lavkl~~~~lP~g~~w 321 (382)
T Consensus 239 spl~rleh~l~p~v~~~IlPlFAfaNAGV~l~~~~~~~l~~~v~~gI~~GL~vGK~lGI~~~s~la~kl~~~~lP~g~~w 318 (382)
T PRK09560 239 SPLKHMEHALHPYVAFAILPVFAFANAGISLEGVSLSGLTSMLPLGIALGLFLGKPLGIFSFSWAAVKLGVAKLPEGVNF 318 (382)
T ss_pred CHHHHHHHHHCCCCCEEHHHHHHHHCCCEEECCCCHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCH
T ss_conf 98999999835231032477788741561005776787636689999999983333769999999999386779999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 999999998755899999986640687-2578876559999999999999999994147789
Q gi|255764465|r 322 CLLYGGSILCGIGFTMSLFLTLQAFPN-ANNLQEKAKIGIILSSVISIIYAYLVFKIPLRKK 382 (382)
Q Consensus 322 ~~l~~v~~LaGIGFTmSLfIa~LAF~~-~~~~~~~aKlgIL~~S~~aailG~~~l~~~~~kk 382 (382)
T Consensus 319 ~~l~gv~~LaGIGFTmSLFIa~LAF~~~~~~~~~~aKigiL~~S~~sai~G~~~L~~~~~kk 380 (382)
T PRK09560 319 KHIFAVSVLCGIGFTMSIFISSLAFGGANPEFDTYARLGILMGSTTAAVLGYFLLHISLPKK 380 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999988889999999985168998677610688999999999999999999863655