HHsearch alignment of GI: 255764465 and MMDB domain: 1zcd_A_

>1zcd_A (A:) Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A
Probab=99.87  E-value=5.9e-21  Score=144.29  Aligned_cols=378  Identities=38%  Similarity=0.704  Sum_probs=309.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC--------CCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             95147898532155799999999999983387124333431124335--------6769999876799999999999999
Q gi|255764465|r    1 MTKNKFFLYRDNFTGILLISTTFITMILANISFSSAYYFDALEYKIA--------NLTLRDWVNDILMILYFFMIGLELK   72 (382)
Q Consensus         1 ~~k~k~F~~~e~~~gilLl~aa~~Al~~ANs~~~~~y~~~~~~~~~~--------~~~l~~wvNDgLMaiFFf~vGLEiK   72 (382)
                      ||....+.+.+..-+++++.+.....+.......+.--....+.-.|        +....++..+.-+.++.|..|+|++
T Consensus         1 ~~~~~~~~~~~~~i~~il~~~~~~~~l~~~~~lP~~~~~il~GillGp~~l~~~~~~~~~~~~~~lgl~~llF~~Gleld   80 (388)
T 1zcd_A            1 MKHLHRFFSSDASGGIILIIAAILAMIMANSGATSGWYHDFLETPVQLRVGSLEINKNMLLWINDALMAVFFLLVGLEVK   80 (388)
T ss_dssp             --------CCSSHHHHHHHHHHHHHHHHHHCSSSHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             90589988323168999999999999998797025689999706300332742356529999886799999999999999


Q ss_pred             HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             99864867899998999999877889999998982379800035045533773789999999842788899999999999
Q gi|255764465|r   73 HELIHGELSSWTKRSLPLLGAIGGITFPACIYMIINCHTEIYLKGWAIPTATDIAFTLGILSWIGPNIPSSLKIFFTALT  152 (382)
Q Consensus        73 rE~~~GeLs~~r~a~lP~~AAlGGmi~Paliy~~~n~~~~~~~~GWaIP~ATDiAFalgvl~llg~rvp~~lrvFLlaLA  152 (382)
                      .+......+.....+.+.......+......|+..+....+..-.+++.++||.+-.+.++.-.+++.+..++..+..-+
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ts~~~v~~~l~~~~~~~~~~~~~~~~~~~  160 (388)
T 1zcd_A           81 RELMQGSLASLRQAAFPVIAAIGGMIVPALLYLAFNYADPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALA  160 (388)
T ss_dssp             HHHHSTTTSSTTTSHHHHHHHHHHTTTTHHHHGGGCCSSTTHHHHTSSSSCCCHHHHHHHHHSSCSSSCSSSHHHHHHHH
T ss_pred             HHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf             98744777746788988999971541878988751137887675478754750899999999964779848999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
Q ss_conf             87544799888864177666799999999999999986259861237899999999999712865678988886317678
Q gi|255764465|r  153 MIDDFSAIAIMAIFYTQSLNLFALQVAITLIFLLFLLNRCGFTNLFIYGFLGFFLWHSIFKSGIHTTVFGVIMALLLPDI  232 (382)
Q Consensus       153 IvDDlgaIlVIAifYs~~i~~~~L~~a~~~~~~l~~l~~~~v~~~~~y~~~g~~lW~~~~~sGIHaTiAGV~l~~~iP~~  232 (382)
                      +.||..+++...++++...+.....................+.+...+.......++...+.+.+..++.+..+..++..
T Consensus       161 ~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (388)
T 1zcd_A          161 IIDDLGAIIIIALFYTNDLSMASLGVAAVAIAVLAVLNLCGARRTGVYILVGVVLWTAVLKSGVHATLAGVIVGFFIPLK  240 (388)
T ss_dssp             HHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHSCCC
T ss_pred             HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
T ss_conf             97425646652000366433999999999999999999628770688988999999999970676477655666314665


Q ss_pred             CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             77789400003788763420443247879998851263246764787310269999999864455899999999996175
Q gi|255764465|r  233 KNYHSPSNRISFYLLGDGLKSWVMPLVLPAFVFVNTGLTISTIPYTDISDPIVWGVMLGLFLGKQSGIFLFAFSTVKIGW  312 (382)
Q Consensus       233 ~~~~~~~~~~~~~~le~~l~p~v~~~IlPlFAfaNaGV~l~~~~~~~~~~pv~~gI~~gL~iGK~lGI~~~s~lavkl~~  312 (382)
                      ....    ....++.++..++.........|.+...+.+....................+.++|.+++...++...+...
T Consensus       241 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (388)
T 1zcd_A          241 EKHG----RSPAKRLEHVLHPWVAYLILPLFAFANAGVSLQGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKL  316 (388)
T ss_dssp             GGGS----SCHHHHHHHHHHHHHHHTHHHHHHHHHCCCCCSSSCCCTHHHHSSTTTTHHHHHTTGGGSTTHHHHTSSCTT
T ss_pred             CCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHEECCCEEEEEEEEHHHHHCCC
T ss_conf             5578----997999999874005665566877640351335665224445578866742121705798745499887364


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             4389998999999999987558999999866406872-578876559999999999999999994147789
Q gi|255764465|r  313 GKLPKDTNWCLLYGGSILCGIGFTMSLFLTLQAFPNA-NNLQEKAKIGIILSSVISIIYAYLVFKIPLRKK  382 (382)
Q Consensus       313 ~~lP~g~~w~~l~~v~~LaGIGFTmSLfIa~LAF~~~-~~~~~~aKlgIL~~S~~aailG~~~l~~~~~kk  382 (382)
                      ...+.+.+|++...++..++.++.+++....++...- ++.....-..++..++++....-...|..+||+
T Consensus       317 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vi~s~~i~~~~~~~~~~~~~~~~  387 (388)
T 1zcd_A          317 AHLPEGTTYQQIMVVGILCGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRLRPS  387 (388)
T ss_dssp             TCCCCSCCGGGGTTHHHHTTCCHHHHHHHHHHHSTTSSCSSHHHHHHHHHHHHHTTTSTTTGGGTTTC---
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             67999998899999999988999999999998558998677722699999999999999999997336899