HHsearch alignment of GI: 255764465 and MMDB domain: 1zcd_A_
>1zcd_A (A:) Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A
Probab=99.87 E-value=5.9e-21 Score=144.29 Aligned_cols=378 Identities=38% Similarity=0.704 Sum_probs=309.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC--------CCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 95147898532155799999999999983387124333431124335--------6769999876799999999999999
Q gi|255764465|r 1 MTKNKFFLYRDNFTGILLISTTFITMILANISFSSAYYFDALEYKIA--------NLTLRDWVNDILMILYFFMIGLELK 72 (382)
Q Consensus 1 ~~k~k~F~~~e~~~gilLl~aa~~Al~~ANs~~~~~y~~~~~~~~~~--------~~~l~~wvNDgLMaiFFf~vGLEiK 72 (382)
||....+.+.+..-+++++.+.....+.......+.--....+.-.| +....++..+.-+.++.|..|+|++
T Consensus 1 ~~~~~~~~~~~~~i~~il~~~~~~~~l~~~~~lP~~~~~il~GillGp~~l~~~~~~~~~~~~~~lgl~~llF~~Gleld 80 (388)
T 1zcd_A 1 MKHLHRFFSSDASGGIILIIAAILAMIMANSGATSGWYHDFLETPVQLRVGSLEINKNMLLWINDALMAVFFLLVGLEVK 80 (388)
T ss_dssp --------CCSSHHHHHHHHHHHHHHHHHHCSSSHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 90589988323168999999999999998797025689999706300332742356529999886799999999999999
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 99864867899998999999877889999998982379800035045533773789999999842788899999999999
Q gi|255764465|r 73 HELIHGELSSWTKRSLPLLGAIGGITFPACIYMIINCHTEIYLKGWAIPTATDIAFTLGILSWIGPNIPSSLKIFFTALT 152 (382)
Q Consensus 73 rE~~~GeLs~~r~a~lP~~AAlGGmi~Paliy~~~n~~~~~~~~GWaIP~ATDiAFalgvl~llg~rvp~~lrvFLlaLA 152 (382)
.+......+.....+.+.......+......|+..+....+..-.+++.++||.+-.+.++.-.+++.+..++..+..-+
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ts~~~v~~~l~~~~~~~~~~~~~~~~~~~ 160 (388)
T 1zcd_A 81 RELMQGSLASLRQAAFPVIAAIGGMIVPALLYLAFNYADPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALA 160 (388)
T ss_dssp HHHHSTTTSSTTTSHHHHHHHHHHTTTTHHHHGGGCCSSTTHHHHTSSSSCCCHHHHHHHHHSSCSSSCSSSHHHHHHHH
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 98744777746788988999971541878988751137887675478754750899999999964779848999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
Q ss_conf 87544799888864177666799999999999999986259861237899999999999712865678988886317678
Q gi|255764465|r 153 MIDDFSAIAIMAIFYTQSLNLFALQVAITLIFLLFLLNRCGFTNLFIYGFLGFFLWHSIFKSGIHTTVFGVIMALLLPDI 232 (382)
Q Consensus 153 IvDDlgaIlVIAifYs~~i~~~~L~~a~~~~~~l~~l~~~~v~~~~~y~~~g~~lW~~~~~sGIHaTiAGV~l~~~iP~~ 232 (382)
+.||..+++...++++...+.....................+.+...+.......++...+.+.+..++.+..+..++..
T Consensus 161 ~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
T 1zcd_A 161 IIDDLGAIIIIALFYTNDLSMASLGVAAVAIAVLAVLNLCGARRTGVYILVGVVLWTAVLKSGVHATLAGVIVGFFIPLK 240 (388)
T ss_dssp HHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
T ss_conf 97425646652000366433999999999999999999628770688988999999999970676477655666314665
Q ss_pred CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 77789400003788763420443247879998851263246764787310269999999864455899999999996175
Q gi|255764465|r 233 KNYHSPSNRISFYLLGDGLKSWVMPLVLPAFVFVNTGLTISTIPYTDISDPIVWGVMLGLFLGKQSGIFLFAFSTVKIGW 312 (382)
Q Consensus 233 ~~~~~~~~~~~~~~le~~l~p~v~~~IlPlFAfaNaGV~l~~~~~~~~~~pv~~gI~~gL~iGK~lGI~~~s~lavkl~~ 312 (382)
.... ....++.++..++.........|.+...+.+....................+.++|.+++...++...+...
T Consensus 241 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (388)
T 1zcd_A 241 EKHG----RSPAKRLEHVLHPWVAYLILPLFAFANAGVSLQGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKL 316 (388)
T ss_dssp GGGS----SCHHHHHHHHHHHHHHHTHHHHHHHHHCCCCCSSSCCCTHHHHSSTTTTHHHHHTTGGGSTTHHHHTSSCTT
T ss_pred CCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHEECCCEEEEEEEEHHHHHCCC
T ss_conf 5578----997999999874005665566877640351335665224445578866742121705798745499887364
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 4389998999999999987558999999866406872-578876559999999999999999994147789
Q gi|255764465|r 313 GKLPKDTNWCLLYGGSILCGIGFTMSLFLTLQAFPNA-NNLQEKAKIGIILSSVISIIYAYLVFKIPLRKK 382 (382)
Q Consensus 313 ~~lP~g~~w~~l~~v~~LaGIGFTmSLfIa~LAF~~~-~~~~~~aKlgIL~~S~~aailG~~~l~~~~~kk 382 (382)
...+.+.+|++...++..++.++.+++....++...- ++.....-..++..++++....-...|..+||+
T Consensus 317 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vi~s~~i~~~~~~~~~~~~~~~~ 387 (388)
T 1zcd_A 317 AHLPEGTTYQQIMVVGILCGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRLRPS 387 (388)
T ss_dssp TCCCCSCCGGGGTTHHHHTTCCHHHHHHHHHHHSTTSSCSSHHHHHHHHHHHHHTTTSTTTGGGTTTC---
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 67999998899999999988999999999998558998677722699999999999999999997336899