BLAST/PSIBLAST alignment of GI: 255764467 and GI: 56698546 at iteration 1
>gi|56698546|ref|YP_168922.1| type I secretion system ATPase [Ruegeria pomeroyi DSS-3] Length = 577
>gi|56680283|gb|AAV96949.1| type I secretion system ATPase [Ruegeria pomeroyi DSS-3] Length = 577
 Score =  246 bits (627), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 164/551 (29%), Positives = 270/551 (49%), Gaps = 24/551 (4%)

Query: 25  SFFINILYLTNPLYMMHIYDSVIGTQSKINLIALSTITLFLYALFFGFDLIRSRLLIESS 84
           SFF N+L LT PLYM+ +YD V+G++S+  L+ALS + +FLY +    D  R R++  + 
Sbjct: 31  SFFANLLMLTGPLYMLQVYDRVLGSRSEQTLVALSLLVVFLYGVMGILDYTRGRVMSRAG 90

Query: 85  H-----LIERFFKPYII-TVTKKYEMDGTSLFSIISSLDQLKQFITSPVLPALLDILFTP 138
                 L +R F   +  +   +  +  T L    + L+ +++FI SPV  A+ D+ +TP
Sbjct: 91  ARFQEALDQRVFDAMVRRSAVAQDPVAQTGL----ADLESVQRFIASPVAMAIFDLPWTP 146

Query: 139 IFIILSFCIHPILGSWAILSGILLLTITILFQANNERLERRYKKSRQDEINFGKAILHNS 198
           IF+      HP LG  A+  G+LL+ IT   Q  + +       +       G  I   +
Sbjct: 147 IFLFAIAIFHPWLGLLAVGGGVLLIGITGFNQLFSRKPALNAAIANNRAGKMGDEIRTEA 206

Query: 199 EYIYAPSTRDFLLTYWNKKRATSQEYQSLIAKKYYFGIS-VTKTLRMTLQSSILGIGAWL 257
           E I +   R      W K R TS   + L A       S +TKTLR+ LQS++LG+GA+L
Sbjct: 207 ETIQSMGMRRAAFDRWRKARVTSLT-EGLTAGDVMGRFSTLTKTLRLFLQSAMLGLGAYL 265

Query: 258 VIHQKLSAGAIIATSIITARAMAPLEQIINSKKSLNVGLKSLKYLINLNDFTTLLNSSDS 317
           V+  +L+ GA+IA SI+  RA+AP+E I+N  + +   LK    L      + LL  +  
Sbjct: 266 VLQGELTPGAMIAASILMGRALAPVEMIVNQWQVVQRSLKGWSSL------SELLEKAPP 319

Query: 318 KKEPISMRLSNNTITAKNIVFRDKKTSRLICQNLSFTIPEGSCCIIAGPSGCGKSNFLLC 377
           + + + +      +  +++       +R   + +SFT+  G    + GPSG GKS     
Sbjct: 320 ENKRMDLPKPKAKLDVQSLTVVPPGDTRAQLKTVSFTVQPGQAIGVIGPSGSGKSTLARA 379

Query: 378 MLGLLTLEKGTISFGDRQISRDFIEKFSAQIGYLSQHCSLFPISITENII-LSHDQNSLH 436
           + G+     GT+      + +   +     IGYL Q   LF  +I ENI  LS   ++  
Sbjct: 380 LTGVWRPAGGTVRLDGAALDQYDPDVLGQHIGYLPQRVQLFEGTIAENIARLSGKPDAKK 439

Query: 437 IAQKTAKIVGCHEDILSLKNGYQT--TYCSDEIPYNIVQKIRLSRIIANNPAILLMDEPL 494
           + +   K    H+ IL L +GY T  T     +    +Q++ L+R + ++P I+++DEP 
Sbjct: 440 VVEAATK-AAVHDMILQLPDGYDTHITAGGGRLSGGQMQRVGLARALYDDPVIVILDEPN 498

Query: 495 YHLDNEAKNNFYTLLKQFKENKKTIVIISHDPTIISMSDFSLIF-HPIQGSLFGLTQDIF 553
             LDN+        ++  KE  K+++I++H P  I+  D  L+  H ++ + FG    + 
Sbjct: 499 SSLDNDGSVALNKAIRSLKEAGKSVLIMAHRPAAIAECDMLLVLDHGVRMA-FGPKDQVL 557

Query: 554 KFNTVTHNQIK 564
           K     H  IK
Sbjct: 558 KEMVTNHQVIK 568