RPSBLAST alignment for GI: 255764467 and conserved domain: TIGR01194

>gnl|CDD|130262 TIGR01194, cyc_pep_trnsptr, cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake. Length = 555
 Score = 50.0 bits (119), Expect = 1e-06
 Identities = 51/186 (27%), Positives = 75/186 (40%), Gaps = 11/186 (5%)

Query: 351 LSFTIPEGSCCIIAGPSGCGKSNFLLCMLGLLTLEKGTISFGDRQISRDFIEKFSAQIGY 410
           +   I +G    I G +GCGKS       GL   ++G I      +S D  + +      
Sbjct: 361 IDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRDDYRDLFSA 420

Query: 411 LSQHCSLFPISITENIILSHDQNSLHIAQKTAKIVGCHEDILSLKNGYQTTYCSDEIPYN 470
           +     LF   I  +     +  SL  AQ+  + +   + +     G+ TT     +   
Sbjct: 421 IFADFHLFDDLIGPD---EGEHASLDNAQQYLQRLEIADKVKIEDGGFSTT---TALSTG 474

Query: 471 IVQKIRLSRIIA--NNPAILLMDEPLYHLDNEAKNNFYT-LLKQFKENKKTIVIISHDPT 527
             Q+ RL+ I A   +  ILL DE     D   K  FY  LL   K   KTI+IISHD  
Sbjct: 475 --QQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQ 532

Query: 528 IISMSD 533
              ++D
Sbjct: 533 YFELAD 538