RPSBLAST alignment for GI: 255764467 and conserved domain: TIGR01257
>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272
Score = 42.3 bits (99), Expect = 4e-04
Identities = 44/206 (21%), Positives = 90/206 (43%), Gaps = 28/206 (13%)
Query: 331 ITAKNIVFRDKKTSRLICQNLSFTIPEGSCCIIAGPSGCGKSNFLLCMLGLLTLEKGTIS 390
+ KN+V + + R L+ T E G +G GK+ L + GLL GT+
Sbjct: 929 VCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVL 988
Query: 391 FGDRQISRDFIEKFSAQIGYLSQHCSLF-PISITENIIL-------SHDQNSLHIAQKTA 442
G + I + ++ +G QH LF +++ E+I+ S ++ L + +
Sbjct: 989 VGGKDIETN-LDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEM-EAML 1046
Query: 443 KIVGCH----EDILSLKNGYQTTYCSDEIPYNIVQKIRLSRIIANNPAILLMDEPLYHLD 498
+ G H E+ L G Q +K+ ++ + ++++DEP +D
Sbjct: 1047 EDTGLHHKRNEEAQDLSGGMQ-------------RKLSVAIAFVGDAKVVVLDEPTSGVD 1093
Query: 499 NEAKNNFYTLLKQFKENKKTIVIISH 524
++ + + LL +++ +TI++ +H
Sbjct: 1094 PYSRRSIWDLLLKYRSG-RTIIMSTH 1118