RPSBLAST alignment for GI: 255764467 and conserved domain: TIGR03269
>gnl|CDD|132313 TIGR03269, met_CoM_red_A2, methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2. Length = 520
Score = 49.0 bits (117), Expect = 3e-06
Identities = 54/244 (22%), Positives = 97/244 (39%), Gaps = 55/244 (22%)
Query: 331 ITAKNIV--FRDKKTSRLICQNLSFTIPEGSCCIIAGPSGCGKSNFLLCMLGLLTLE--K 386
I KN+ F K+ + +N+SFTI EG I G SG GKS + + G+ E
Sbjct: 1 IEVKNLTKKFDGKE----VLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTS 56
Query: 387 GTI----------------SFGDRQISR----------DFIE-------KFSAQIGYLSQ 413
G I S DF + +I + Q
Sbjct: 57 GRIIYHVALCEKCGYVERPSKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQ 116
Query: 414 HCSLFPI----SITENIILSHDQNSLH-IAQKTAKIVGCHEDILSLKN-GYQTTYCSDEI 467
F + ++ +N++ +L I + + VG D++ + ++ T+ + ++
Sbjct: 117 RT--FALYGDDTVLDNVL-----EALEEIGYEGKEAVGRAVDLIEMVQLSHRITHIARDL 169
Query: 468 PYNIVQKIRLSRIIANNPAILLMDEPLYHLDNEAKNNFYTLLKQ-FKENKKTIVIISHDP 526
Q++ L+R +A P + L DEP LD + + L++ K + ++V+ SH P
Sbjct: 170 SGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWP 229
Query: 527 TIIS 530
+I
Sbjct: 230 EVIE 233