RPSBLAST alignment for GI: 255764467 and conserved domain: TIGR01846

>gnl|CDD|162558 TIGR01846, type_I_sec_HlyB, type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 694
 Score =  132 bits (333), Expect = 3e-31
 Identities = 124/544 (22%), Positives = 232/544 (42%), Gaps = 48/544 (8%)

Query: 6   YSANFMKIYFSFFCITILPSFFINILYLTNPLYMMHIYDSVIGTQ--SKINLIALSTITL 63
           +    ++ Y   F   +L S  + +  L  PL    + D V+  +  S ++++AL+ + +
Sbjct: 130 FIPAIIR-YRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAV 188

Query: 64  FLYALFFGFDLIRSRLLIESSHLIE-----RFFKPYI---ITVTKKYEMDGTSLFSIISS 115
            ++    G   +R+ L    +  I+     R ++  +   +   +   +  T   + +  
Sbjct: 189 AIFEPALG--GLRTYLFAHLTSRIDVELGARLYRHLLGLPLGYFESRRVGDT--VARVRE 244

Query: 116 LDQLKQFITSPVLPALLDILFTPIFIILSFCIHPILGSWAILSGILLLTITILFQAN--N 173
           L+Q++ F+T   L  +LD+LF  +F+ + F   P L +  ++  ++   +  +F      
Sbjct: 245 LEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTL-TGVVIGSLVCYALLSVFVGPILR 303

Query: 174 ERLERRYKKSRQDEINFGKAILHNSEYIYAPSTRDFLLTYWNKKRA----TSQEYQSL-- 227
           +R+E ++++S        +++    E I A +T       W+++ A     S    +L  
Sbjct: 304 KRVEDKFERSAAATSFLVESV-TGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGN 362

Query: 228 IAKKYYFGISVTKTLRMTLQSSILGIGAWLVIHQKLSAGAIIATSIITARAMAP---LEQ 284
           IA +    I + + L   +   +L  GA LVI   LS G ++A +++  R   P   L Q
Sbjct: 363 IAGQ---AIELIQKLTFAI---LLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQ 416

Query: 285 IINSKKSLNVGLKSLKYLINLNDFTTLLNSSDSKKEPISMRLSNNTITAKNIVFRDKKTS 344
           +    +   + L+ L  ++N    +     S       ++      IT +NI FR    S
Sbjct: 417 LWQDFQQTGIALERLGDILN----SPTEPRSAGL---AALPELRGAITFENIRFRYAPDS 469

Query: 345 RLICQNLSFTIPEGSCCIIAGPSGCGKSNFLLCMLGLLTLEKGTISFGDRQISRDFIEKF 404
             +  NL+  I  G    I GPSG GKS     +  L T + G +      ++       
Sbjct: 470 PEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWL 529

Query: 405 SAQIGYLSQHCSLFPISITENIILSHDQNSLHIAQKTAKIVGCHEDILSLKNGYQTTYCS 464
             Q+G + Q   LF  SI +NI L +           AK+ G H+ I  L  GY T    
Sbjct: 530 RRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEV-- 587

Query: 465 DEIPYNIV----QKIRLSRIIANNPAILLMDEPLYHLDNEAKNNFYTLLKQFKENKKTIV 520
            E   N+     Q+I ++R +  NP IL+ DE    LD E++      +++     +T++
Sbjct: 588 GEKGANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRG-RTVI 646

Query: 521 IISH 524
           II+H
Sbjct: 647 IIAH 650