RPSBLAST alignment for GI: 255764467 and conserved domain: TIGR03375

>gnl|CDD|163239 TIGR03375, type_I_sec_LssB, type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export. Length = 694
 Score =  161 bits (411), Expect = 3e-40
 Identities = 125/556 (22%), Positives = 227/556 (40%), Gaps = 85/556 (15%)

Query: 22  ILPSFFINILYLTNPLYMMHIYDSVIGTQSKINLIALSTITLFLYALF-FGFDLIRSRL- 79
           ++ S  IN+L L +PL++M++YD V+  Q+   L  L+ I + L  +F F    +RS   
Sbjct: 153 LIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLA-IGVALAIVFDFVLKTLRSYFL 211

Query: 80  --------LIESSHLIERFFKPYIITVTKKYEMDGT-SLFSIISSLDQLKQFITSPVLPA 130
                   LI S+ L ER     ++ +  +       S  + +   + ++ F TS  L A
Sbjct: 212 DVAGKKADLILSAKLFER-----VLGLRMEARPASVGSFANQLREFESVRDFFTSATLTA 266

Query: 131 LLDILFTPIFIILSFCIHPILGSWAILSGILLLTITILF----QANNERL-ERRYKKSRQ 185
           L+D+ F  +F+++      I+G   +   ++ + + +L     Q    RL E   ++S Q
Sbjct: 267 LIDLPFALLFLLVIA----IIGGPLVWVPLVAIPLILLPGLLLQRPLSRLAEESMRESAQ 322

Query: 186 DEINFGKAILHNS----EYIYAPSTRDFLLTYWNKKRATSQEYQSLIAKKYYFGISVTKT 241
                  A+L  S    E I A +        W +  A        +  ++   ++    
Sbjct: 323 RN-----AVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSG--LKSRFLSNLATNFA 375

Query: 242 LRMTLQSSILGI--GAWLVIHQKLSAGAIIATSIITARAMAPLEQII-------NSKKSL 292
             +    S+  +  G +L+   +L+ G +IA  +++ RA+APL Q+         +K +L
Sbjct: 376 QFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTAL 435

Query: 293 NVGLKSLKYLINLNDFTTLLNSSDSKKEPISMRLSNNTITAKNIVFRDKKTSRLICQNLS 352
                      +L++   L          +        I  +N+ F           N+S
Sbjct: 436 Q----------SLDELMQLPVERPEGTRFLHRPRLQGEIEFRNVSFAYPGQETPALDNVS 485

Query: 353 FTIPEGSCCIIAGPSGCGKSNFLLCMLGLLTLEKGTISFGD---RQISRDFIEKFSAQIG 409
            TI  G    I G  G GKS  L  +LGL    +G++       RQI    +      IG
Sbjct: 486 LTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADL---RRNIG 542

Query: 410 YLSQHCSLFPISITENIILSHDQNSLHIAQKTAKIVGCHEDILSLKNGYQTTYCSDEIPY 469
           Y+ Q   LF  ++ +NI L           + A++ G  E +    +G            
Sbjct: 543 YVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDM--------- 593

Query: 470 NIV------------QKIRLSRIIANNPAILLMDEPLYHLDNEAKNNFYTLLKQFKENKK 517
             +            Q + L+R +  +P ILL+DEP   +DN ++  F   LK++    K
Sbjct: 594 -QIGERGRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLA-GK 651

Query: 518 TIVIISHDPTIISMSD 533
           T+V+++H  +++ + D
Sbjct: 652 TLVLVTHRTSLLDLVD 667