RPSBLAST alignment for GI: 255764467 and conserved domain: cd03294
>gnl|CDD|73053 cd03294, ABC_Pro_Gly_Bertaine, This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 269
Score = 84.9 bits (210), Expect = 5e-17
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 22/199 (11%)
Query: 341 KKTSRLI-CQNLSFTIPEGSCCIIAGPSGCGKSNFLLCMLGLLTLEKGTISFGDRQIS-- 397
KKT + + ++S + EG +I G SG GKS L C+ L+ G + + I+
Sbjct: 32 KKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAM 91
Query: 398 --RDFIEKFSAQIGYLSQHCSLFP-ISITENIILSHD------QNSLHIAQKTAKIVGCH 448
++ E +I + Q +L P ++ EN+ + A + ++VG
Sbjct: 92 SRKELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLE 151
Query: 449 EDILSLKNGYQTTYCSDEIPYNIVQKIRLSRIIANNPAILLMDEPLYHLDNEAKNNFYT- 507
G++ Y DE+ + Q++ L+R +A +P ILLMDE LD +
Sbjct: 152 --------GWEHKY-PDELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDE 202
Query: 508 LLKQFKENKKTIVIISHDP 526
LL+ E +KTIV I+HD
Sbjct: 203 LLRLQAELQKTIVFITHDL 221