HHsearch alignment for GI: 255764468 and conserved domain: pfam03739
>pfam03739 YjgP_YjgQ Predicted permease YjgP/YjgQ family. Members of this family are predicted integral membrane proteins of unknown function. They are about 350 amino acids long and contain about 6 transmembrane regions. They are predicted to be permeases although there is no verification of this.
Probab=100.00 E-value=0 Score=372.94 Aligned_cols=346 Identities=24% Similarity=0.399 Sum_probs=294.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999985079998999999999747999999999999999999999865568
Q gi|255764468|r 6 LYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTESLNILLKISGYLIPTVLPMVTPFCFAMETTNVLTSMNRNTE 85 (361)
Q Consensus 6 rYi~k~~l~~f~~~~~~l~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~lP~~l~~~lP~a~li~~l~~~~~L~~~~E 85 (361)
T Consensus 1 RYi~k~~l~~fl~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lP~~l~~~lP~s~lia~l~~~~~L~~~~E 80 (353)
T pfam03739 1 RYILREFLKPFLLVLLVLLLLFLLVDLLRLLDLILGGGLPLADILRLLLLLLPSILELILPLALLLAVLLTLGRLARDSE 80 (353)
T ss_pred CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 92389999999999999999999999999999997189999999999999889999999999999999999999984264
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHH
Q ss_conf 89998735453221242100004665553101210127887765444556542000112220121012203434534442
Q gi|255764468|r 86 LLIIDNTGTSRITLIKPVLFLAILLSIFLFISENIIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYN 165 (361)
Q Consensus 86 l~al~a~GiS~~~i~~p~l~~~~~i~~~~~~l~~~i~P~~~~~~~~~~~~~~~~~~~~~~~~g~f~~~~~~~~i~i~~~~ 165 (361)
T Consensus 81 l~a~~a~GiS~~~i~~p~l~~~~~~~~~~~~~~~~v~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~ 160 (353)
T pfam03739 81 LTALRAAGISLKRLLRPVLILALLLSLLSFLLSEYLVPYANQKLEQLLAEILSKAPSLLLRPGLFLRDGDGLIIYVKKVD 160 (353)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEECCCCEEEEEEEEC
T ss_conf 89999838990667899999999999999998540306999999999999860662001479806986997799999983
Q ss_pred HHC-CCCCEEEEEECCCCCEEEEEEEEEEEECC--CCEEEEECCEEEEECCCCCCEEEEEECCCCCCCCCCCC--CCCCC
Q ss_conf 100-01101355303578515787500257228--95699877878885178862124430122012566563--10014
Q gi|255764468|r 166 PNN-TLQGIFIVDSRDTQTHKIYYAQSGSIDLD--RQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANS--STIVL 240 (361)
Q Consensus 166 ~~~-~l~~v~i~~~~~~~~~~~i~A~~~~~~~~--~~~~~l~~g~~~~~~~~~~~~~~~~F~~~~~~~~~~~~--~~~~~ 240 (361)
T Consensus 161 ~~~~~l~~v~i~~~~~~~~~~~i~A~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 240 (353)
T pfam03739 161 PDGRLLEGVFIYDFRDGGLTSVITAKSATLDSDPNGGVWILENGTIYRFDKDGEELSILSFDRYEIDLSLTPKDLSSLTA 240 (353)
T ss_pred CCCCEEEEEEEEEECCCCCEEEEEECEEEEEECCCCCEEEEECCEEEEECCCCCCEEEEEEEEEEEECCCCHHHHHHHCC
T ss_conf 89986865899980699835999968189986599977999755999954899725777611378544688777644128
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 60028989986200433541368989999999999999999999999999986245555653015899999999999999
Q gi|255764468|r 241 KANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALVRQRKKIHPIFISLSISFGVFW 320 (361)
Q Consensus 241 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~rls~pl~~l~~~lla~~~~~~~~~~r~~~~~~~~~~~l~~~~~~~~ 320 (361)
T Consensus 241 ~~~~ls~~~L~~~i-~~~~~~~~~~~~~~~~~~~r~~~pl~~l~l~ll~~~l~~~~~--R-~~~~~~~~~~l~~~~~-y~ 315 (353)
T pfam03739 241 DPEELSLSELYAYI-KRLKASGLDVRKYRAELHRRLALPLSCLVLALLALPLGLGSP--R-SGRGAGLVLAILLGFL-YY 315 (353)
T ss_pred CHHHHHHHHHHHHH-HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--C-CCCHHHHHHHHHHHHH-HH
T ss_conf 87887789999999-999866776114699999999989999999999999831676--6-7726999999999999-99
Q ss_pred HHHHHHHHHCCCCHHHHHH--HHHHHHHHHHHHHHHHH
Q ss_conf 9999999721342278999--99999999999999960
Q gi|255764468|r 321 GFSYIIHKIEQNPYYIPIL--YLFLFCISSIFLLMIKK 356 (361)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 356 (361)
T Consensus 316 ~l~~~~~~l~~~~~i~p~~a~w~p~~i~~~i~~~l~~r 353 (353)
T pfam03739 316 VLLFLGEALGENGVLPPLLAAWLPNLLFLLLGLYLLLR 353 (353)
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999997499019999999999999999999709